Miyakogusa Predicted Gene
- Lj2g3v1778710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1778710.1 tr|G7LAK1|G7LAK1_MEDTR Tau class glutathione
S-transferase OS=Medicago truncatula GN=MTR_8g105170
PE,33.55,1e-18,PPR,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; PPR_2,Pentatricopepti,CUFF.37842.1
(369 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 3e-79
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 3e-79
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 6e-33
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 5e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 99 6e-21
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 9e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 97 2e-20
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 5e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 5e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 9e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 91 1e-18
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 90 2e-18
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 90 2e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 87 2e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 85 6e-17
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 82 8e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 1e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 80 3e-15
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 80 3e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 5e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 2e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 3e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 6e-14
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 75 1e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 74 1e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 70 2e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 68 1e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 68 1e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 1e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 67 2e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 67 3e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 64 1e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 64 1e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 2e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 64 2e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 63 3e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 63 4e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 6e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 61 1e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 4e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 59 6e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 58 9e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 54 1e-07
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 52 5e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 5e-07
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 52 6e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 52 7e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 51 1e-06
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 50 4e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 4e-06
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-05
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 192/308 (62%), Gaps = 47/308 (15%)
Query: 64 DSSREGSEPIPNRALRGTQPVNPHSREYNRGSRSSRPRFDGNRGRPDDVEMTNKSSQTDI 123
D + EP+PNR LRG + N H R R N G+ D
Sbjct: 40 DEQQNPPEPLPNRPLRGERSSNSH--------REPPARQAHNLGKSDTT----------- 80
Query: 124 GFQGRNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMP- 182
+SD D FL++FKLG + + E K Q +P
Sbjct: 81 ------LSD---------DGFLEQFKLGVNQDS-----------RETPKPEQYPQEPLPP 114
Query: 183 -EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
ED+DEIFKKMKE GLIPNAVAMLDGLCKDGLVQEA+KLFGLMR+KGTIPE+VIYTAVVE
Sbjct: 115 PEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ KAHK +DAKRIFRKMQ+NGI+PNAFSY VLVQGL C+ L DA FC EMLE+GHSP
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSP 234
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSVWEAIFG 361
N+ TFV+LVD + +GV +A+ AI TL +KGF VN KAVK F+D + PF WEAIF
Sbjct: 235 NVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFK 294
Query: 362 KKAPQMPF 369
KK + PF
Sbjct: 295 KKPTEKPF 302
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 192/308 (62%), Gaps = 47/308 (15%)
Query: 64 DSSREGSEPIPNRALRGTQPVNPHSREYNRGSRSSRPRFDGNRGRPDDVEMTNKSSQTDI 123
D + EP+PNR LRG + N H R R N G+ D
Sbjct: 40 DEQQNPPEPLPNRPLRGERSSNSH--------REPPARQAHNLGKSDTT----------- 80
Query: 124 GFQGRNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMP- 182
+SD D FL++FKLG + + E K Q +P
Sbjct: 81 ------LSD---------DGFLEQFKLGVNQDS-----------RETPKPEQYPQEPLPP 114
Query: 183 -EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
ED+DEIFKKMKE GLIPNAVAMLDGLCKDGLVQEA+KLFGLMR+KGTIPE+VIYTAVVE
Sbjct: 115 PEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ KAHK +DAKRIFRKMQ+NGI+PNAFSY VLVQGL C+ L DA FC EMLE+GHSP
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSP 234
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSVWEAIFG 361
N+ TFV+LVD + +GV +A+ AI TL +KGF VN KAVK F+D + PF WEAIF
Sbjct: 235 NVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFK 294
Query: 362 KKAPQMPF 369
KK + PF
Sbjct: 295 KKPTEKPF 302
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 140/263 (53%), Gaps = 28/263 (10%)
Query: 106 RGRPDDVEMTNKSSQTDIGFQG----RNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSE 161
RGR D V S+ F G R S K VN K+ F +S E
Sbjct: 96 RGRRDFVRSKRNSNSLFPWFCGGVFARQFSSETKRVNT---------KVNFSLSDDDSDE 146
Query: 162 VAASNLSEEAKSAN---------SNQPAM-----PEDADEIFKKMKETGLIPNAVAMLDG 207
+ ++E++K S +PA+ P++ EIF KM+ G AV M D
Sbjct: 147 ETETQVTEDSKKQEPPPPPYDPFSKKPAIEEPEDPKNLQEIFHKMRTEGFTNEAVKMFDA 206
Query: 208 LCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPN 267
L KDG EAL+LF +++K +P++V +TA+VE Y A +A + ++F +M ++G+SPN
Sbjct: 207 LSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPN 266
Query: 268 AFSYTVLVQGLCKCSRL-QDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAI 326
A++Y+VL++GL + +DA ++ +EM+ G SPN T+ + + FV+E A+ +
Sbjct: 267 AYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELL 326
Query: 327 RTLIEKGFVVNEKAVKGFLDMKK 349
+ + KGFV +EKAV+ L+ K+
Sbjct: 327 QEMKGKGFVPDEKAVREALEYKR 349
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+E F +M G++P+ V ++DG CK G ++ A K F M + P+++ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + +A ++F +M G+ P++ ++T L+ G CK ++DAF M++AG S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN+ T+ L+DG KE + A + + + G
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + F +M + P+ + A++ G C+ G + EA KLF M KG P+ V +T ++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY KA DA R+ M G SPN +YT L+ GLCK L A E EM + G P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
N+ T+ +V+G K + EA
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEA 510
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A+E+ +M + GL PN ++++GLCK G ++EA+KL G G + V YT +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ Y K+ + D A+ I ++M G+ P ++ VL+ G C L+D + ML G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+PN TTF LV + + A + + +G
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 3/180 (1%)
Query: 158 NSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLV 214
+S ++ L+ A + Q +A ++F +M GL P++V +++G CK G +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 215 QEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVL 274
++A ++ M + G P +V YT +++G K D A + +M G+ PN F+Y +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 275 VQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
V GLCK +++A + E AG + + T+ L+D + K + +A+ ++ ++ KG
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 15/234 (6%)
Query: 123 IGFQGRNMSDTNKVVNKLGDS--FLDKFKL--GFDNKAGNSSEVAASNLSEE-AKSANSN 177
IG Q N+ N +VN L S + KL F+ N+ V + L + KS +
Sbjct: 485 IGLQP-NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ A EI K+M GL P V +++G C G++++ KL M KG P
Sbjct: 544 K------AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+ ++V+ Y + A I++ M S G+ P+ +Y LV+G CK +++A+ EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMK 348
G S +++T+ L+ GF+K + EA+ + +G +++ F D K
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+F++ E G+ N + ++ +C+ G ++EA L LM KG P+++ Y+ VV GY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ + D ++ M+ G+ PN++ Y ++ LC+ +L +A E EM+ G P+
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 305 TFVDLVDGFVKEQGVAEA 322
+ L+DGF K + A
Sbjct: 353 VYTTLIDGFCKRGDIRAA 370
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 187 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
++ + MK GL PN+ +++ LC+ + EA + F M +G +P+ V+YT +++G+
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K A + F +M S I+P+ +YT ++ G C+ + +A + EM G P+
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
TF +L++G+ K + +A +I+ G
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA + M + G PN V ++DGLCK+G + A +L M + G P I Y ++
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V G K+ ++A ++ + ++ G++ + +YT L+ CK + A E EML G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P + TF L++GF + + + + ++ KG N
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q ++A + M+ G P+ ++ +++G C+ G + + KL +M+ KG P
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
IY +++ + K +A+ F +M GI P+ YT L+ G CK ++ A +F EM
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+P++ T+ ++ GF + + EA + KG
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 8/173 (4%)
Query: 180 AMPEDADEIFKKMKETGLI---PNAVAMLDGLCKDGL-VQEALKLFGLMREKGTIPEIVI 235
+ +A +F+KM GL+ + L L KD A+ +F E G +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 295
Y V+ + + +A + M+ G +P+ SY+ +V G C+ L ++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 296 EAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGF 344
G PN + ++ + +AEA+ A +I +G VV + GF
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+E F +M G++P+ V ++DG CK G ++ A K F M + P+++ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + +A ++F +M G+ P++ ++T L+ G CK ++DAF M++AG S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN+ T+ L+DG KE + A + + + G
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + F +M + P+ + A++ G C+ G + EA KLF M KG P+ V +T ++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY KA DA R+ M G SPN +YT L+ GLCK L A E EM + G P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
N+ T+ +V+G K + EA
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEA 510
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A+E+ +M + GL PN ++++GLCK G ++EA+KL G G + V YT +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ Y K+ + D A+ I ++M G+ P ++ VL+ G C L+D + ML G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+PN TTF LV + + A + + +G
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 3/180 (1%)
Query: 158 NSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLV 214
+S ++ L+ A + Q +A ++F +M GL P++V +++G CK G +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 215 QEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVL 274
++A ++ M + G P +V YT +++G K D A + +M G+ PN F+Y +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 275 VQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
V GLCK +++A + E AG + + T+ L+D + K + +A+ ++ ++ KG
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 15/234 (6%)
Query: 123 IGFQGRNMSDTNKVVNKLGDS--FLDKFKL--GFDNKAGNSSEVAASNLSEE-AKSANSN 177
IG Q N+ N +VN L S + KL F+ N+ V + L + KS +
Sbjct: 485 IGLQP-NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ A EI K+M GL P V +++G C G++++ KL M KG P
Sbjct: 544 K------AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+ ++V+ Y + A I++ M S G+ P+ +Y LV+G CK +++A+ EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMK 348
G S +++T+ L+ GF+K + EA+ + +G +++ F D K
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+F++ E G+ N + ++ +C+ G ++EA L LM KG P+++ Y+ VV GY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ + D ++ M+ G+ PN++ Y ++ LC+ +L +A E EM+ G P+
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 305 TFVDLVDGFVKEQGVAEA 322
+ L+DGF K + A
Sbjct: 353 VYTTLIDGFCKRGDIRAA 370
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 187 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
++ + MK GL PN+ +++ LC+ + EA + F M +G +P+ V+YT +++G+
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K A + F +M S I+P+ +YT ++ G C+ + +A + EM G P+
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
TF +L++G+ K + +A +I+ G
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA + M + G PN V ++DGLCK+G + A +L M + G P I Y ++
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V G K+ ++A ++ + ++ G++ + +YT L+ CK + A E EML G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P + TF L++GF + + + + ++ KG N
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q ++A + M+ G P+ ++ +++G C+ G + + KL +M+ KG P
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
IY +++ + K +A+ F +M GI P+ YT L+ G CK ++ A +F EM
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+P++ T+ ++ GF + + EA + KG
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 8/173 (4%)
Query: 180 AMPEDADEIFKKMKETGLI---PNAVAMLDGLCKDGL-VQEALKLFGLMREKGTIPEIVI 235
+ +A +F+KM GL+ + L L KD A+ +F E G +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 295
Y V+ + + +A + M+ G +P+ SY+ +V G C+ L ++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 296 EAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGF 344
G PN + ++ + +AEA+ A +I +G VV + GF
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+IF +M + G P++ ++ GLC+ G + EA KLF M EK P +V YT+++ G
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ D+A R +M+S GI PN F+Y+ L+ GLCK R A E M+ G PNM
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 304 TTFVDLVDGFVKEQGVAEA 322
T+ L+ G KEQ + EA
Sbjct: 298 VTYTTLITGLCKEQKIQEA 316
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++MK G+ PN +++DGLCKDG +A++LF +M +G P +V YT +
Sbjct: 244 DEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K K +A + +M G+ P+A Y ++ G C S+ ++A F EM+ G
Sbjct: 304 ITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGI 363
Query: 300 SPNMTTF 306
+PN T+
Sbjct: 364 TPNRLTW 370
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 185 ADEIFKKMKETGLIPNAVAM---LDGLCK-DGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
A + +K M+E GL P ++ + LC+ DG V LK+F M ++G P+ Y ++
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G + + D+AK++F +M +P +YT L+ GLC + +A + EM G
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
PN+ T+ L+DG K+ +A ++ +G
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++F +M E P V ++++GLC V EA++ M+ KG P + Y+++
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSL 268
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K ++ A +F M + G PN +YT L+ GLCK ++Q+A E M G
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P+ + ++ GF EA + +I G N
Sbjct: 329 KPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 182 PEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P D+ +F KMK+ P+ V +L L ++ + A K + MRE G P +
Sbjct: 102 PFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV 161
Query: 239 VVEGYTKAHKADDAK-RIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+++ + DA +IF +M G P++++Y L+ GLC+ R+ +A + EM+E
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+P + T+ L++G + V EA + + KG N +D
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+F+ M G PN V ++ GLCK+ +QEA++L M +G P+ +Y V+
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTV-------LVQGLCKCSRLQDAFEFCVEM 294
G+ K +A +M GI+PN ++ + +V+GLC + AF + M
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSM 399
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
G S + T LV K+ +A + ++ G +
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI 440
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 6/163 (3%)
Query: 174 ANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI 230
S Q A+ A E+ +KM+E + +AV ++DGLCKDG + A LF M KG
Sbjct: 239 CKSGQTAL---AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
+I+ Y ++ G+ A + DD ++ R M ISPN +++VL+ K +L++A +
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
EM++ G +PN T+ L+DGF KE + EA + +I KG
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+AD++ K+M + G+ PN + +++DG CK+ ++EA+++ LM KG P+I+ + ++
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY KA++ DD +FR+M G+ N +Y LVQG C+ +L+ A + EM+
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 301 PNMTTFVDLVDGF 313
P++ ++ L+DG
Sbjct: 471 PDIVSYKILLDGL 483
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + +M ETG PN V +L+ +CK G A++L M E+ + V Y+ ++
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G K D+A +F +M+ G + +Y L+ G C R D + +M++ S
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
PN+ TF L+D FVKE + EA ++ ++++G N +D
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D ++ + M + + PN V ++D K+G ++EA +L M ++G P + Y ++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ K ++ ++A ++ M S G P+ ++ +L+ G CK +R+ D E EM G
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
N T+ LV GF + + AK + ++ +
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 3/189 (1%)
Query: 162 VAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEAL 218
V A+ ++ Q E A ++F++M + P+ V+ +LDGLC +G +++AL
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 219 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 278
++FG + + +I IY ++ G A K DDA +F + G+ +A +Y +++ L
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL 553
Query: 279 CKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
C+ L A +M E GH+P+ T+ L+ + + A I + GF +
Sbjct: 554 CRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADV 613
Query: 339 KAVKGFLDM 347
VK ++M
Sbjct: 614 STVKMVINM 622
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 166 NLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFG 222
NLS K ++ +DA ++F+ M ++ +P + + + K + L L
Sbjct: 53 NLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCK 112
Query: 223 LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS 282
M KG I + ++ + + K A K+ G P+ + L+ GLC
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 283 RLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
R+ +A E M+E GH P + T LV+G V++A I ++E GF NE
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 3/148 (2%)
Query: 188 IFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ K+M+ G+ I M++ C+ + A G + + G P+ VI+ ++ G
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ +A + +M G P + LV GLC ++ DA M+E G PN
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
T+ +++ K A A +R + E+
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEER 257
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A E++ +M G+ P+ + +++DG CK+ + EA ++F LM KG P+IV Y+ ++
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
Y KA + DD R+FR++ S G+ PN +Y LV G C+ +L A E EM+ G
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 301 PNMTTFVDLVDGF 313
P++ T+ L+DG
Sbjct: 453 PSVVTYGILLDGL 465
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 9/170 (5%)
Query: 167 LSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGL 223
L+ KS NS A ++F+KM+E + + V ++D LCKDG +AL LF
Sbjct: 217 LNRLCKSGNSAL------ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
M KG ++V Y++++ G K DD ++ R+M I P+ +++ L+ K +
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L +A E EM+ G +P+ T+ L+DGF KE + EA ++ KG
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+F++M G+ P+ V +LDGLC +G + +AL++F M++ I IY ++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G A K DDA +F + G+ P+ +Y V++ GLCK L +A +M E G +P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
+ T+ L+ + G+ + I + GF + +K +DM
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +F +M+ G+ + V +++ GLC DG + K+ M + IP++V ++A+
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + K K +AK ++ +M + GI+P+ +Y L+ G CK + L +A + M+ G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P++ T+ L++ + K + V + R + KG + N
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D ++ ++M +IP+ V A++D K+G + EA +L+ M +G P+ + Y ++
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ K + +A ++F M S G P+ +Y++L+ CK R+ D E+ G
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
PN T+ LV GF + + AK + ++ +G
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D +F+++ GLIPN + ++ G C+ G + A +LF M +G P +V Y +
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G + + A IF KMQ + ++ Y +++ G+C S++ DA+ + + G
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P++ T+ ++ G K+ ++EA R + E G
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M E G P+ V +L+ LCK G AL LF M E+ +V Y+ V+
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ K DDA +F +M+ GI + +Y+ L+ GLC + D + EM+
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
P++ TF L+D FVKE + EAK +I +G
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 27/190 (14%)
Query: 160 SEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIP---------NAVA------M 204
S + + LS + + N DA ++F+ M ++ +P +AVA +
Sbjct: 29 SSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDL 88
Query: 205 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
+ G CK ++L G+ + T+ T ++ Y + K A + + G
Sbjct: 89 VLGFCK------GMELNGIEHDMYTM------TIMINCYCRKKKLLFAFSVLGRAWKLGY 136
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
P+ +++ LV G C R+ +A M+E P++ T L++G + V+EA
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 325 AIRTLIEKGF 334
I ++E GF
Sbjct: 197 LIDRMVEYGF 206
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 187 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+++KM+E G+ PN +++ LCKDG ++A ++F MRE+G IV Y ++ G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ K ++A ++ +M+S+GI+PN +Y L+ G C +L A C ++ G SP++
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
T+ LV GF ++ + A ++ + E+G
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++F +M + GL+ N +++GL K+G+ ++ +++ M+E G P + Y V
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ K + DA ++F +M+ G+S N +Y L+ GLC+ +L +A + +M G
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGF 344
+PN+ T+ L+DGF + +A R L +G V V GF
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E + ++ ++ E G PN V ++DG CK G +++A LF M + G + YT +
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K ++ KMQ +G+ PN ++Y ++ LCK R +DAF+ EM E G
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAI 326
S N+ T+ L+ G +E + EA +
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVV 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+++ +MK G+ PN + ++DG C G + +AL L ++ +G P +V Y +V
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + A ++ ++M+ GI P+ +YT+L+ + ++ A + + M E G
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
P++ T+ L+ GF + + EA ++++EK NE
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA ++F +M+E G+ N V ++ GLC++ + EA K+ M+ G P ++ Y +
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ K A + R ++S G+SP+ +Y +LV G C+ A + EM E G
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
P+ T+ L+D F + + +A ++ E G V
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ K+M+E G+ P+ V ++D + +++A++L M E G +P++ Y+ ++
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ + ++A R+F+ M PN Y ++ G CK A + EM E +P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N+ ++ +++ KE+ EA+ + +I+ G
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++ M+E GL+P+ ++ G C G + EA +LF M EK P VIY +
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ GY K + A ++ ++M+ ++PN SY +++ LCK + ++A +M+++G
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 300 SPNMTTFVDLV 310
P+ T+ + L+
Sbjct: 545 DPS-TSILSLI 554
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + + +K GL P+ V ++ G C+ G A K+ M E+G P V YT +++
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ ++ + A ++ M+ G+ P+ +Y+VL+ G C ++ +A M+E P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
N + ++ G+ KE A ++ + EK
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 58/140 (41%), Gaps = 34/140 (24%)
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISP---------------------------- 266
+Y ++ Y ++ + + F +M NG P
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 267 ------NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVA 320
+ +S+ +L++G C+ ++ +F+ +E+ E G SPN+ + L+DG K+ +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 321 EAKGAIRTLIEKGFVVNEKA 340
+AK + + G V NE+
Sbjct: 216 KAKDLFFEMGKLGLVANERT 235
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
Query: 174 ANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI 230
S Q A+ A E+ +KM+E + +AV ++DGLCKDG + A LF M KG
Sbjct: 223 CKSGQTAL---AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
+I+IYT ++ G+ A + DD ++ R M I+P+ +++ L+ K +L++A E
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
EM++ G SP+ T+ L+DGF KE + +A + ++ KG
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+E+ K+M + G+ P+ V +++DG CK+ + +A + LM KG P I + ++
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY KA+ DD +FRKM G+ + +Y L+QG C+ +L+ A E EM+
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 301 PNMTTFVDLVDGF 313
P++ ++ L+DG
Sbjct: 455 PDIVSYKILLDGL 467
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E+F++M + P+ V+ +LDGLC +G ++AL++F + + +I IY +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G A K DDA +F + G+ P+ +Y +++ GLCK L +A +M E GH
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
SPN T+ L+ + E ++ I + GF V+ VK +DM
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM 606
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + +M ETG PN V +L +CK G A++L M E+ + V Y+ ++
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G K D+A +F +M+ G + YT L++G C R D + +M++ +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
P++ F L+D FVKE + EA+ + +I++G
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D ++ + M + + P+ VA ++D K+G ++EA +L M ++G P+ V YT++
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ K ++ D A + M S G PN ++ +L+ G CK + + D E +M G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
+ T+ L+ GF + + AK + ++ +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A E+ +M E G P + A+++GLC +G V +A+ L M E G P V Y V+
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ K+ + A + RKM+ I +A Y++++ GLCK L +AF EM G
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
++ + L+ GF + +R +I++ + A +D
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 181 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+ +D E+F+KM G++ + V ++ G C+ G ++ A +LF M + P+IV Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+++G + + A IF K++ + + + Y +++ G+C S++ DA++ +
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
G P++ T+ ++ G K+ ++EA R + E G
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 191 KMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
K+ + G P+ V +++GLC +G V EAL+L M E G P ++ A+V G
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFV 307
K DA + +M G PN +Y +++ +CK + A E +M E + +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 308 DLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGF 344
++DG K+ + A + KGF ++ ++GF
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 61/118 (51%)
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
+A+ LF M P ++ ++ + + + D + ++M+ GI+ N ++ ++++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
C+C +L AF ++++ G+ P+ TF L++G E V+EA + ++E G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%)
Query: 217 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 276
L L M KG + + ++ + K A K+ G P+ +++ L+
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 277 GLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVV 336
GLC R+ +A E M+E GH P + T LV+G V++A I ++E GF
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 337 NE 338
NE
Sbjct: 211 NE 212
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+E+F++M G++P+ + +LDGLC +G +++AL++F +++ IV+YT ++E
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K K +DA +F + G+ PN +YTV++ GLCK L +A +M E G++P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
N T+ L+ +++ + + I + GF + ++K +DM
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 78/134 (58%), Gaps = 3/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A+E++K+M G+ PN + ++DG C + EA + LM P+IV +T++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++GY + DD ++FR + G+ NA +Y++LVQG C+ +++ A E EM+ G
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 300 SPNMTTFVDLVDGF 313
P++ T+ L+DG
Sbjct: 435 LPDVMTYGILLDGL 448
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 185 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +KM+E + + ++D LC+DG + A+ LF M KG +V Y ++V
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G KA K +D + + M S I PN ++ VL+ K +LQ+A E EM+ G SP
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK----GFVVNEKAVKGFLDMKK 349
N+ T+ L+DG+ + ++EA + ++ V +KG+ +K+
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D ++F+ + + GL+ NAV ++ G C+ G ++ A +LF M G +P+++ Y +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K + A IF +Q + + YT +++G+CK +++DA+ + G
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
PN+ T+ ++ G K+ ++EA +R + E G
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +FK+M+ G+ + V +++ GLCK G + L M + +P ++ + +++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ K K +A ++++M + GISPN +Y L+ G C +RL +A M+ SP
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA----VKGF 344
++ TF L+ G+ + V + R + ++G V N V+GF
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M E G P+ V ++++G+C+ G AL L M E+ ++ Y+ ++
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ + D A +F++M++ GI + +Y LV+GLCK + D +M+
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
PN+ TF L+D FVKE + EA + +I +G N +D
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
D + K M ++PN + +LD K+G +QEA +L+ M +G P I+ Y ++
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY ++ +A + M N SP+ ++T L++G C R+ D + + + G
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
N T+ LV GF + + A+ + ++ G +
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 59/118 (50%)
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
+A+ LF M +P +V ++ + + + ++++ NGI+ N ++ +++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
C+C + A+ ++++ G+ P+ TTF L+ G E V+EA + ++E G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
AD+ K+M+E G++PN V +++ CK G V EA + M ++G + + YT ++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K K DDA+ IFR+M+ GI+P+ FSY VL+ G K +Q A EM+E G +P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
N+ + L+ GF + + +AK + + KG
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA+EIF++M+ G+ P+ + +++G K G +Q+A +F M E+G P ++IY +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ ++ + + AK + +M G+ PNA +Y ++ G CK L +AF EM G
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSV-WEA 358
P+ + LVDG + V E+ + KG PF+ + W
Sbjct: 729 VPDSFVYTTLVDGCCRLNDV-----------ERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 359 IFGK 362
FGK
Sbjct: 778 KFGK 781
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+ +MK+ ++ + ++ G+C G + A + M G P +VIYT +++ +
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ + DA R+ ++M+ GI+P+ F Y L+ GL K R+ +A F VEM+E G PN
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
T+ + G+++ A A ++ + E G + N+ G ++
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A I K+M +G PN V ++ ++ +A+++ M+E+G P+I Y +++
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +KA + D+A+ +M NG+ PNAF+Y + G + S A ++ EM E G P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA 340
N L++ + K+ V EA A R+++++G + + K
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 177 NQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEI 233
++ + E A +F M +GLIP A A +++G C++ V++ +L M+++ +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
Y VV+G + D A I ++M ++G PN YT L++ + SR DA E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 294 MLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
M E G +P++ + L+ G K + + EA+ + ++E G N F+
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +M E GL PNA A + G + A K MRE G +P V+ T +
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y K K +A +R M GI +A +YTVL+ GL K ++ DA E EM G
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+P++ ++ L++GF K + +A ++E+G N
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + K+MKE G+ P+ +++ GL K + EA M E G P Y A +
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY +A + A + ++M+ G+ PN T L+ CK ++ +A M++ G
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ T+ L++G K V +A+ R + KG
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
V++ E T D A ++ M G+ P ++Y VL+ GLCK RL+DA VE
Sbjct: 243 VLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVE 302
Query: 294 MLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
M G S + T+ L+DG +K + AKG + ++ G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 199 PNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 255
PN V M+D LCK+G ++ A +LF M+ +P ++ YT+++ GY K + + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 256 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM-----LEAGHSPNMTTFVDLV 310
F + + GI P+ Y+V++ K A +M ++ G +++T L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 311 DGFVK--EQGVAE 321
GF K E VAE
Sbjct: 923 SGFAKVGEMEVAE 935
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 191 KMKET----GLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
K+KE+ GL+P ++DGLCK +++A L M G + Y+ +++G
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K AD AK + +M S+GI+ + Y + + K ++ A M+ +G P
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+ L++G+ +E+ V + + + ++ V++
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 19/183 (10%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A +F++MK GL+ + M+D CK GL+++A K F MRE G P +V YTA+
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA---FE-FC---- 291
+ Y KA K A +F M S G PN +Y+ L+ G CK +++ A FE C
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619
Query: 292 ---VEML-----EAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKG 343
V+M + PN+ T+ L+DGF K V EA+ + + +G N+
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 344 FLD 346
+D
Sbjct: 680 LID 682
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 21/157 (13%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEI-------- 233
A+E+F+ M G +PN V A++DG CK G V++A ++F M +P++
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 234 --------VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQ 285
V Y A+++G+ K+H+ ++A+++ M G PN Y L+ GLCK +L
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 286 DAFEFCVEMLEAGHSPNMTTFVDLVDGF--VKEQGVA 320
+A E EM E G + T+ L+D + VK Q +A
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ KM E PN V M+DGLCK G EA KL +M EKG P +V YTA+++
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ K + + +M S G++PN +Y VL+ CK L A EM + H P
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWP 846
Query: 302 NMTT-FVDLVDGFVKE 316
T + +++GF KE
Sbjct: 847 THTAGYRKVIEGFNKE 862
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A ++ M G PN + A++DGLCK G + EA ++ M E G + Y+++
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ Y K + D A ++ KM N +PN YT ++ GLCK + +A++ M E G
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775
Query: 300 SPNMTTFVDLVDGF 313
PN+ T+ ++DGF
Sbjct: 776 QPNVVTYTAMIDGF 789
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
D D FK+ + PN V A+LDG CK V+EA KL M +G P ++Y A++
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G K K D+A+ + +M +G ++Y+ L+ K R A + +MLE +
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
PN+ + +++DG K EA ++ + EKG
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A++ + +M G++ N + + LC G ++A + M +G IP+ Y+ V+
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
A K + A +F +M+ G+ + ++YT++V CK ++ A ++ EM E G +P
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
N+ T+ L+ ++K + V+ A T++ +G + N +D
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A + ++M G IP+ +L+ LC ++ A LF M+ G + ++ YT +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V+ + KA + A++ F +M+ G +PN +YT L+ K ++ A E ML G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
PN+ T+ L+DG K V +A
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKA 607
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 197 LIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAK 253
+P+ V ++ GLC+ L +EA+ MR +P +V Y+ ++ G + K
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 254 RIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF 313
R+ M G P+ + LV C A++ +M++ GH P + L+
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 314 VKEQG------VAEAKGAIRTLIEKGFVVNEKAVKGF 344
++ + A+ A ++ G V+N+ V F
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 38/178 (21%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLV------------------------- 214
E E+ ++M G+ PN V ++D CK+G +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 215 -----QEALKLFGLMREKG---TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISP 266
+E ++ GL+ E G T P + +Y +++ KA + + A R+ ++ + +
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 267 NAFS--YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
+S Y L++ LC ++++ AF+ EM + G P M +F L+ G + ++EA
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKD------GLVQEALKLFGLMREKGTIPEIVI 235
A ++ KKM + G +P V ++ +C D L+ A K + M G + +
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 295
++ A K + A + R+M G P+ +Y+ ++ LC S+++ AF EM
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 296 EAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFLDMKK 349
G ++ T+ +VD F K + +A+ + E G V + +L KK
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 9/167 (5%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ ++ E+A + +M+ T +PN V +L G + ++ +M +G P
Sbjct: 314 EASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 373
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC------KCSRLQDAF 288
I+ ++V Y + A ++ +KM G P Y +L+ +C C L A
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 289 EFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
+ EML AG N +A IR +I +GF+
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Query: 174 ANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI 230
S Q A+ A E+ +KM+E + +AV ++DGLCK G + A LF M KG
Sbjct: 239 CKSGQTAL---AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
I+ Y ++ G+ A + DD ++ R M I+PN +++VL+ K +L++A E
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
EM+ G +P+ T+ L+DGF KE + +A + ++ KG
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+E+ K+M G+ P+ + +++DG CK+ + +A ++ LM KG P I + ++
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY KA++ DD +FRKM G+ + +Y L+QG C+ +L A E EM+
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ T+ L+DG + G +E I IEK
Sbjct: 471 PNIVTYKILLDGLC-DNGESEKALEIFEKIEK 501
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + KM E G PNAV +L+ +CK G A++L M E+ + V Y+ ++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G K D+A +F +M+ GI+ N +Y +L+ G C R D + +M++ +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN+ TF L+D FVKE + EA+ + +I +G
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+F++M + PN V +LDGLC +G ++AL++F + + +I IY ++
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G A K DDA +F + G+ P +Y +++ GLCK L +A +M E GH+P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
+ T+ L+ + + ++ I L GF V+ +K +DM
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDM 622
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D ++ + M + + PN V ++D K+G ++EA +L M +G P+ + YT++
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ K + D A ++ M S G PN ++ +L+ G CK +R+ D E +M G
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ T+ L+ GF + + AK + ++ + N K LD
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A E+ +M E G P+ + +++GLC G EA+ L M E G P V Y V+
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
K+ + A + RKM+ I +A Y++++ GLCK L +AF EM G +
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
N+ T+ L+ GF + +R +I++
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D E+F+KM G++ + V ++ G C+ G + A +LF M + P IV Y +
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G +++ A IF K++ + + + Y +++ G+C S++ DA++ + G
Sbjct: 480 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P + T+ ++ G K+ ++EA+ R + E G
Sbjct: 540 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 210 KDGLVQ----EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGIS 265
+ GLV +A+ LF M +P ++ ++ + K + D + ++M+ GI+
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 266 PNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGA 325
N ++ ++++ C+C +L AF ++++ G+ PN TF L++G E V+EA
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 326 IRTLIEKG 333
+ ++E G
Sbjct: 181 VDRMVEMG 188
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 191 KMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
K+ + G PN + +++GLC +G V EAL+L M E G P+++ +V G +
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFV 307
K +A + KM G PNA +Y ++ +CK + A E +M E + +
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 308 DLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
++DG K + A + KG N
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Query: 166 NLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFG 222
NLS + + +DA ++F+ M + +P + + + K L L
Sbjct: 53 NLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCK 112
Query: 223 LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS 282
M KG + + ++ + + K A K+ G PN +++ L+ GLC
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 283 RLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
R+ +A E M+E GH P++ T LV+G AEA I ++E G
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+ +FK+M E+ + PN ++ G C G + AL LF M KG +P +V Y +++
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY K K DD ++ R M G+ PN SY V++ GLC+ R+++ EM G+S
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
+ T+ L+ G+ KE +A
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQA 329
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 177 NQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEI 233
+Q +A + ++M + G P+ V A+++G C G +++A+ + M+EKG P++
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
V Y+ V+ G+ +++ D+A R+ R+M GI P+ +Y+ L+QG C+ R ++A + E
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 294 MLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
ML G P+ T+ L++ + E + +A ++EKG +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 191 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
+M GL P+ + +++ +CK G + A++ MR +G P YT +V+G+++
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFV 307
++A R+ R+M NG SP+ +Y L+ G C +++DA +M E G SP++ ++
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 308 DLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGFLDMKK 349
++ GF + V EA R ++EKG + ++GF + ++
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 25/204 (12%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
EDA + + MKE GL P+ V+ +L G C+ V EAL++ M EKG P+ + Y+++
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ + + +A ++ +M G+ P+ F+YT L+ C L+ A + EM+E G
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAI---------------RTLIEKGFVVNEKAV--- 341
P++ T+ L++G K+ EAK + TLIE + K+V
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 342 -KGFLDMKKPFSPS--VWEAIFGK 362
KGF MK + + V+E++ GK
Sbjct: 612 IKGFC-MKGMMTEADQVFESMLGK 634
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 171 AKSANSNQPAMPEDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREK 227
K+ N N+ A E +M+ GL PN ++DG + G + EA ++ M +
Sbjct: 356 CKAGNMNR------AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 228 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 287
G P +V Y A++ G+ K +DA + M+ G+SP+ SY+ ++ G C+ + +A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 288 FEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
EM+E G P+ T+ L+ GF +++ EA ++ G
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +++++M GL P+ A+++ C +G +++AL+L M EKG +P++V Y+ +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ---------------GLCKCSRL 284
+ G K + +AKR+ K+ P+ +Y L++ G C +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 285 QDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAV 341
+A + ML H P+ T + ++ G + + +A + +++ GF+++ V
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 220 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 279
+F M E P + Y ++ G+ A D A +F KM++ G PN +Y L+ G C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 280 KCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE- 338
K ++ D F+ M G PN+ ++ +++G +E + E + + +G+ ++E
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 339 ---KAVKGF 344
+KG+
Sbjct: 312 TYNTLIKGY 320
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 176 SNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPE 232
SNQ M +A ++ +M E GLIP +++GLCK G V +A L +M KG P+
Sbjct: 402 SNQ-GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 233 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 292
I + ++ GY+ K ++A I M NG+ P+ ++Y L+ GLCK S+ +D E
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 293 EMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAV 341
M+E G +PN+ TF L++ + + + EA G + + K VN AV
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS--VNPDAV 567
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV-IYTA 238
++A + ++MK + P+AV ++DG CK+G + A LF M E + Y
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNI 607
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ +T+ A+++F++M + P+ ++Y ++V G CK + ++F +EM+E G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKK 349
P++TT +++ E V EA G I +++KG V +AV D+ K
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV--PEAVNTICDVDK 716
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +F + G+ PN + ++ GL G++ EA +L M EKG IPE+ + +V
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K DA + + M S G P+ F++ +L+ G ++++A E ML+ G P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ T+ L++G K + +T++EKG
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A+ KM GL P++ ++ G CK G+VQ A ++ G G +P+ Y ++
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G + + A +F + GI PN Y L++GL + +A + EM E G
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
P + TF LV+G K V++A G ++ +I KG+
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++ +++ K+ + G++PN + GLC+ G + A+++ G + E+G P+++ Y +
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K K +A+ KM + G+ P++++Y L+ G CK +Q A + + G
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P+ T+ L+DG E A + KG
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 187 EIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+F KM +G+ + +L LCK G V+E KL + ++G +P + Y ++G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ + D A R+ + G P+ +Y L+ GLCK S+ Q+A + +M+ G P+
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
T+ L+ G+ K V A+ + + GFV ++ + +D
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 174 ANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI 230
A + M + A+ I G +P+ +++DGLC +G AL LF KG
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
P +++Y +++G + +A ++ +M G+ P ++ +LV GLCK + DA
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
M+ G+ P++ TF L+ G+ + + A + +++ G
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++ GLCK+ QEA G M +G P+ Y ++ GY K A+RI NG
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
P+ F+Y L+ GLC A E L G PN+ + L+ G + + EA
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 324 GAIRTLIEKGFV 335
+ EKG +
Sbjct: 412 QLANEMSEKGLI 423
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 176 SNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPE 232
S Q M E+A EI M + G+ P+ ++L+GLCK ++ ++ + M EKG P
Sbjct: 472 STQLKM-ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 233 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 292
+ + ++E + K D+A + +M++ ++P+A ++ L+ G CK L A+
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 293 EMLEAGHSPNMT-TFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
+M EA + T T+ ++ F ++ V A+ + ++++
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 38/190 (20%)
Query: 183 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A +++ +M++ G+ P+ + + CK AL+L M +G +V Y V
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGIS---------------------------------- 265
V G+ + + + +F KM ++G+S
Sbjct: 188 VGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV 247
Query: 266 -PNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
PN F+Y + +QGLC+ L A ++E G P++ T+ +L+ G K EA+
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV 307
Query: 325 AIRTLIEKGF 334
+ ++ +G
Sbjct: 308 YLGKMVNEGL 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 11/232 (4%)
Query: 112 VEMTNKSSQTDIGFQGRNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEA 171
+EM N S + ++GF+ +S V+ KLG + KF+ + + E +++ E
Sbjct: 24 LEMFN-SMRKEVGFK-HTLSTYRSVIEKLG--YYGKFE-AMEEVLVDMRENVGNHMLEGV 78
Query: 172 KSA---NSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMR 225
N + ++A +F++M P A++ L G +A K++ MR
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 226 EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQ 285
++G P++ +T ++ + K + A R+ M S G N +Y +V G + +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 286 DAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+ +E +ML +G S ++TF L+ K+ V E + + +I++G + N
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A I KM + G P+ V ++++G C+ V +A+ L M E G P+IV Y A+++
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K + +DA F++++ GI PN +YT LV GLC SR DA +M++ +P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 302 NMTTFVDLVDGFVKEQGVAEAK 323
N+ T+ L+D FVK V EAK
Sbjct: 259 NVITYSALLDAFVKNGKVLEAK 280
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 21/194 (10%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + FK+++ G+ PN V A+++GLC +A +L M +K P ++ Y+A++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ + K K +AK +F +M I P+ +Y+ L+ GLC R+ +A + M+ G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN----EKAVKGF-----LDMKKPF 351
++ ++ L++GF K + V + R + ++G V N ++GF +D + F
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 352 ---------SPSVW 356
SP +W
Sbjct: 388 FSQMDFFGISPDIW 401
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 7/173 (4%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + KM E G P+ VA ++D LCK V +A F + KG P +V YTA+V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G + + DA R+ M I+PN +Y+ L+ K ++ +A E EM+
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN----EKAVKGFLDMKK 349
P++ T+ L++G + EA ++ KG + + + GF K+
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A E+F++M + P+ V ++++GLC + EA ++F LM KG + ++V Y ++
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ KA + +D ++FR+M G+ N +Y L+QG + + A EF +M G S
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 301 PNMTTFVDLVDGF 313
P++ T+ L+ G
Sbjct: 398 PDIWTYNILLGGL 410
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A+++F M G + + V+ +++G CK V++ +KLF M ++G + V Y +
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ +A D A+ F +M GISP+ ++Y +L+ GLC L+ A +M +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ T+ ++ G K V EA +L KG
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Query: 190 KKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
KKM+ G+ + +++ C V AL + G M + G P+ V ++V G+ +
Sbjct: 109 KKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR 168
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
++ DA + KM G P+ +Y ++ LCK R+ DAF+F E+ G PN+ T+
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 307 VDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
LV+G ++A + +I+K N LD
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q + A E F +M G+ P+ +L GLC +G +++AL +F M+++ +IV
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
YT V+ G K K ++A +F + G+ P+ +YT ++ GLC L + +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 295 LEAGHSPNMTTFVD 308
+ G N T D
Sbjct: 497 KQEGLMKNDCTLSD 510
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 63/125 (50%)
Query: 210 KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 269
+D + +A+ LF M + P IV + ++ K K D + +KM+ GI + +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 270 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
++ +++ C C ++ A +ML+ G+ P+ T LV+GF + V++A + +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 330 IEKGF 334
+E G+
Sbjct: 182 VEIGY 186
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 4/179 (2%)
Query: 159 SSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQ 215
SS V+ +L E + DA ++F M ++ P+ V +L + K
Sbjct: 44 SSSVSGGDLRERLSKTRLRDIKL-NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD 102
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
+ L M G ++ + V+ + + A I KM G P+ + LV
Sbjct: 103 VVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLV 162
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
G C+ +R+ DA +M+E G+ P++ + ++D K + V +A + + KG
Sbjct: 163 NGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 149 KLGFDNKAGNSSEVAAS-NLSEEAKSANS-----NQPAMPEDADEIFKKMKETGLIPNAV 202
K GF KA N A S ++ + NS Q +A +F ++ GL+P+ V
Sbjct: 667 KEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEV 726
Query: 203 A---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM 259
++D LCK+GL +A KL M KG +P I+IY ++V+GY K + +DA R+ +
Sbjct: 727 TYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRK 786
Query: 260 QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGV 319
++P+AF+ + +++G CK +++A E + S + F+ L+ GF + +
Sbjct: 787 MMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRM 846
Query: 320 AEAKGAIRTLIEKGFVVNEKAVK 342
EA+G +R ++ V+E VK
Sbjct: 847 EEARGLLREML-----VSESVVK 864
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
Query: 190 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
++M E G+ + V+ ++DGL K+G V+EAL L G M ++G P ++ YTA++ G K
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
K ++A +F ++ S GI + F Y L+ G+C+ L AF +M + G P++ T+
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 307 VDLVDGFVKEQGVAEA 322
+++G V+EA
Sbjct: 386 NTVINGLCMAGRVSEA 401
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
+ + +++GLCK+G + +AL L + +G + Y +++ G + +A R+F
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQ 317
+++ G+ P+ +Y +L+ LCK DA + M+ G PN+ + +VDG+ K
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK-- 772
Query: 318 GVAEAKGAIRTLIEK 332
+ + + A+R + K
Sbjct: 773 -LGQTEDAMRVVSRK 786
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Query: 147 KFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA--- 203
+ LGF A +S + + ++ + Q ++ ++ +++++ G + V
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+ G K G + +AL M EKG ++V Y+ +++G +K ++A + KM G
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
+ PN +YT +++GLCK +L++AF +L G + +V L+DG ++ + A
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 324 GAIRTLIEKGF 334
+ + ++G
Sbjct: 368 SMLGDMEQRGI 378
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 182 PEDADEIFKKMKETG-LIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
PE A F+ ++G L+PN V ++ LC+ G V E L + ++G + V Y+
Sbjct: 187 PELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYS 246
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+ GY K DA R+M G++ + SY++L+ GL K +++A +M++
Sbjct: 247 NWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKE 306
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
G PN+ T+ ++ G K + EA ++ G V+E +D
Sbjct: 307 GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 196 GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKG---TIPEIVI----------------- 235
G++ +A+ +L CK G + A++++ +MR KG T P ++
Sbjct: 587 GMLNDAILLL---CKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVV 643
Query: 236 --------------YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKC 281
YT ++ G K A + +S G++ N +Y L+ GLC+
Sbjct: 644 NAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQ 703
Query: 282 SRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
L +A + G P+ T+ L+D KE +A+ + +++ KG V N
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPN 759
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 38/201 (18%)
Query: 180 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
+ ++A ++F M+ G PN V ++ G CK V++ +K+F M +KG + + Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISP------------------------------ 266
T +++GY + D A+ +F +M S P
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 267 -----NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
N +YT+++QG+CK +++DAF+ + G PN+ T+ ++ GF + + E
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486
Query: 322 AKGAIRTLIEKGFVVNEKAVK 342
A + + E GF+ NE K
Sbjct: 487 ADSLFKKMKEDGFLPNESVYK 507
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
Query: 182 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P A KM + G P+ V ++L+G C +++A+ LF + G P +V YT
Sbjct: 134 PCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTT 193
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ K + A +F +M +NG PN +Y LV GLC+ R DA +M++
Sbjct: 194 LIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR 253
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE---------KGFVVNEKAVKGFLD 346
PN+ TF L+D FVK + EAK +I+ G ++N + G LD
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A E++ M + + P+ ++++GLC GL+ EA ++F LM G P VIYT ++
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K+ + +D +IF +M G+ N +YTVL+QG C R A E +M
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P++ T+ L+DG V +A
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKA 417
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+F +M G PN V A++ GLC+ G +A L M ++ P ++ +TA+++
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ K K +AK ++ M + P+ F+Y L+ GLC L +A + M G P
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA----VKGFLDMKKP-FSPSVW 356
N + L+ GF K + V + + +KG V N ++G+ + +P + V+
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 357 EAIFGKKAP 365
+ ++AP
Sbjct: 387 NQMSSRRAP 395
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + + M + + PN + A++D K G + EA +L+ +M + P++ Y +++
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G D+A+++F M+ NG PN YT L+ G CK R++D + EM + G
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 301 PNMTTFVDLVDGF 313
N T+ L+ G+
Sbjct: 361 ANTITYTVLIQGY 373
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
EDA +F ++ G PN V ++ LCK+ + A++LF M G+ P +V Y A+
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V G + + DA + R M I PN ++T L+ K +L +A E M++
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE----KAVKGFLDMKK 349
P++ T+ L++G + EA+ + G NE + GF K+
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 188 IFKKMKETG---LIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+F++M+ G L+ ++ +C A G M + G P++V +T+++ GY
Sbjct: 105 LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
++ +DA +F ++ G PN +YT L++ LCK L A E +M G PN+
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
T+ LV G + +A +R ++++
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
+AL LF M +P I+ +T ++ K ++ D +F +MQ GI P + +++
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+C S+ A F +M++ G P++ TF L++G+ + +A ++ GF
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA ++F +M + +P+ + +L + K + LF M+ G P + V+
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ + A KM G P+ ++T L+ G C +R++DA ++L G
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
PN+ T+ L+ K + + A
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHA 207
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++FK M++ G+ P+ +A ++DG K G++ KLF KG ++V++++ ++
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
Y K+ A ++++M GISPN +YT+L++GLC+ R+ +AF ++L+ G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ T+ L+DGF K + +I+ G+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A+ IF+ +K T PN V + + LCK+ + A+++F +M EKG+ P V Y +
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ ++K+ + + ++F +MQ GISP+ SY++++ GLCK R+ +A + ++A
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 743
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P++ + L+ G+ K + EA ++ G
Sbjct: 744 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++K+M G+ PN V ++ GLC+DG + EA ++G + ++G P IV Y+++++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ K ++ M G P+ Y VLV GL K + A F V+ML
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
N+ F L+DG+ + EA R +
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
EDA + F + E + P+ V M+ G C + EA ++F L++ P V T +
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 648
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ K + D A R+F M G PNA +Y L+ K ++ +F+ EM E G
Sbjct: 649 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
SP++ ++ ++DG K V EA I+
Sbjct: 709 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 740
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+++A K F + E P+IV Y ++ GY + D+A+RIF ++ PN + T+
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L+ LCK + + A M E G PN T+ L+D F K + + + EKG
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A ++ ++ + G+ P+ V +++DG CK G ++ L+ M + G P++VIY +V
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G +K A R KM I N + L+ G C+ +R +A + M G
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 301 PNMTTF 306
P++ TF
Sbjct: 529 PDVATF 534
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 81/180 (45%), Gaps = 44/180 (24%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+++ M + G P+ V ++DGL K GL+ A++ M + +V++ ++++G+
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYT-------------------------------- 272
+ ++ D+A ++FR M GI P+ ++T
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567
Query: 273 ---------VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
V++ L KC R++DA +F ++E P++ T+ ++ G+ + + EA+
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 17/164 (10%)
Query: 183 EDADEIFKKMKETGLIPNAVA---------MLDGLCKDGLVQEALKLFGLMREKGTIPEI 233
++A ++F+ M G+ P+ M D CK L+LF LM+ +I
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
+ V+ K H+ +DA + F + + P+ +Y ++ G C RL +A E E
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA-ERIFE 631
Query: 294 MLEAG-HSPNMTTFVDLVDGFVKEQGVAEAKGAIR---TLIEKG 333
+L+ PN T L+ K + GAIR + EKG
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNN---DMDGAIRMFSIMAEKG 672
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 189 FKKMKETGLIPNAVA----MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
F K+ G+ P+ V+ +LD L G V +AL L+ E+G IV V++G +
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ + A R+ + G +PN ++ L+ G CK + AF+ M + G P++
Sbjct: 264 -VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 305 TFVDLVDGFVK 315
+ L+DG+ K
Sbjct: 323 AYSTLIDGYFK 333
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++FK M++ G+ P+ +A ++DG K G++ KLF KG ++V++++ ++
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
Y K+ A ++++M GISPN +YT+L++GLC+ R+ +AF ++L+ G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ T+ L+DGF K + +I+ G+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A+ IF+ +K T PN V + + LCK+ + A+++F +M EKG+ P V Y +
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ ++K+ + + ++F +MQ GISP+ SY++++ GLCK R+ +A + ++A
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 772
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P++ + L+ G+ K + EA ++ G
Sbjct: 773 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++K+M G+ PN V ++ GLC+DG + EA ++G + ++G P IV Y+++++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ K ++ M G P+ Y VLV GL K + A F V+ML
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
N+ F L+DG+ + EA R +
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
EDA + F + E + P+ V M+ G C + EA ++F L++ P V T +
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ K + D A R+F M G PNA +Y L+ K ++ +F+ EM E G
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
SP++ ++ ++DG K V EA I+
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+++ M + G P+ V ++DGL K GL+ A++ M + +V++ ++++G+
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ ++ D+A ++FR M GI P+ ++T +++ RL++A M + G P+
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 305 TFVDLVDGFVKEQ 317
+ L+D F K
Sbjct: 568 AYCTLIDAFCKHM 580
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 38/189 (20%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMR-------------- 225
E+A +F +M + GL P+A+A ++D CK L+LF LM+
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 226 ---------------------EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
E P+IV Y ++ GY + D+A+RIF ++
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
PN + T+L+ LCK + + A M E G PN T+ L+D F K + +
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727
Query: 325 AIRTLIEKG 333
+ EKG
Sbjct: 728 LFEEMQEKG 736
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGL---CKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++F+ M G+ P+ + +G ++EAL LF M + G P+ + Y +
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + K K ++F MQ N IS + V++ L KC R++DA +F ++E
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAK 323
P++ T+ ++ G+ + + EA+
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAE 656
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A ++ ++ + G+ P+ V +++DG CK G ++ L+ M + G P++VIY +V
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G +K A R KM I N + L+ G C+ +R +A + M G
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P++ TF ++ + E + EA
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEA 550
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 189 FKKMKETGLIPNAVA----MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
F K+ G+ P+ V+ +LD L G V +AL L+ E+G IV V++G +
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ + A R+ + G +PN ++ L+ G CK + AF+ M + G P++
Sbjct: 264 -VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 305 TFVDLVDGFVK 315
+ L+DG+ K
Sbjct: 323 AYSTLIDGYFK 333
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 5/153 (3%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAV 239
+A + +M + G P+ V +++GLCK G + AL L M EKG I ++VIY +
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTI 264
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K DDA +F +M + GI P+ F+Y+ L+ LC R DA +M+E
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
+PN+ TF L+D FVKE + EA+ +I++
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M E + PN V A++D K+G + EA KL+ M ++ P+I Y++++
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + D+AK +F M S PN +Y+ L++G CK R+++ E EM + G
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N T+ L+ GF + + A+ + ++ G
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +F+ M PN V ++ G CK V+E ++LF M ++G + V YT +
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ +A D+A+ +F++M S G+ PN +Y +L+ GLCK +L A + +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P++ T+ +++G K V + L KG
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 26/186 (13%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +FK+M G+ PN + +LDGLCK+G + +A+ +F ++ P+I Y +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+EG KA K +D +F + G+SPN +Y ++ G C+ ++A +M E G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 300 SPNMTTFVDLV-----DG-------FVKEQ------GVAEAKGAIRTLIEKGFVVNEKAV 341
PN T+ L+ DG +KE G A G + ++ G +
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG-----RLD 624
Query: 342 KGFLDM 347
K FLDM
Sbjct: 625 KSFLDM 630
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +F +M G+ P+ +++ LC G +A +L M E+ P +V ++A+
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + K K +A++++ +M I P+ F+Y+ L+ G C RL +A M+
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
PN+ T+ L+ GF K + V E R + ++G V N
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A++++ +M + + P+ ++++G C + EA +F LM K P +V Y+ ++
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 297
+G+ KA + ++ +FR+M G+ N +YT L+ G + C Q F+ +M+
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK---QMVSV 462
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEA 322
G PN+ T+ L+DG K +A+A
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKA 487
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KKM++ + + V ++DGLCK + +AL LF M KG P++ Y++++
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ DA R+ M I+PN +++ L+ K +L +A + EM++ P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK----GFVVNEKAVKGFLDMKK 349
++ T+ L++GF + EAK +I K V +KGF K+
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 66/121 (54%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
V +A+ LFG M + P IV + ++ K +K + + +MQ+ GIS + ++Y++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ C+ S+L A +M++ G+ P++ T L++G+ + +++A + ++E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 334 F 334
+
Sbjct: 184 Y 184
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + +M E G P+ ++ GL EA+ L M ++G P++V Y VV
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G K D A + +KM+ I + Y ++ GLCK + DA EM G
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
P++ T+ L+ ++A + +IE+
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 205 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
++ C+ + AL + M + G P+IV ++++ GY + + DA + +M G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
P+ F++T L+ GL ++ +A +M++ G P++ T+ +V+G K + A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 325 AIRTL----IEKGFVVNEKAVKGFLDMK 348
++ + IE V+ + G K
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 152 FDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGL 208
F + +G+ E+ + LS+ K +DA ++F M ++ P+ V +L +
Sbjct: 43 FASASGDYREILRNRLSDIIK---------VDDAVDLFGDMVKSRPFPSIVEFNKLLSAV 93
Query: 209 CKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNA 268
K + + L M+ G ++ Y+ + + + + A + KM G P+
Sbjct: 94 AKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDI 153
Query: 269 FSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRT 328
+ + L+ G C R+ DA +M+E G+ P+ TF L+ G +EA +
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 329 LIEKG 333
++++G
Sbjct: 214 MVQRG 218
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM + G P+ V ++L+G C + +A+ L M E G P+ +T ++
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +KA +A + +M G P+ +Y +V GLCK + A +M +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ + ++DG K + + +A + KG
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 25/180 (13%)
Query: 184 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA+E++ +M + PN ++++G C +G V EA ++F LM KG P++V YT+++
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K K DDA +IF +M G++ N +YT L+QG + + A E M+ G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKK----PFSPSVW 356
PN+ T+ L + L G V +KA+ F DM+K +P++W
Sbjct: 385 PNIRTYNVL----------------LHCLCYNGKV--KKALMIFEDMQKREMDGVAPNIW 426
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 7/174 (4%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A + +M E G+ P+ V ++D LCK+G V AL LF M G P++V+YT++
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V G + + DA + R M I P+ ++ L+ K + DA E EM+
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFLDMKK 349
+PN+ T+ L++GF E V EA+ + KG V + GF KK
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q + P A KM + G P+ V ++++G C ++EA+ + M E G P++V
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+YT +++ K + A +F +M++ GI P+ YT LV GLC R +DA M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
+ P++ TF L+D FVKE +A+ +I
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREK---GTIP 231
Q P A E+F M G+ PN +L LC +G V++AL +F M+++ G P
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 232 EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 291
I Y ++ G K + A +F M+ + +YT+++QG+CK ++++A
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 292 VEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ G PN+ T+ ++ G +E EA R + E G
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%)
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
EAL LF M E +P I+ +T ++ K K D + +Q G+S + ++ +L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
C+ S+ A F +M++ G P++ TF L++GF + EA + ++E G
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+++ C+ A G M + G P+IV +T+++ G+ ++ ++A + +M G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
I P+ YT ++ LCK + A +M G P++ + LV+G +A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 324 GAIRTLIEK 332
+R + ++
Sbjct: 233 SLLRGMTKR 241
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A+++F+ MK+ G++PN AM+DG CK G V++A L+ + +P +V++ +
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V+G+ KA + A+ +F M G+ PN + Y L+ G CK + +A EM
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
SP++ T+ L++G E VAEA
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEA 393
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +F M + G+ PN ++ G CK G + EA+ L M P++ YT ++
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G + +A R+F+KM++ I P++ +Y L+ G CK ++ A + C EM +G P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
N+ TF L+DG+ + + A G + KG V + +D
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+ +F+KMK + P++ +++ G CK+ +++AL L M G P I+ ++ ++
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY A ++ +M GI P+ +YT L+ K + +++A +MLEAG
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 301 PNMTTFVDLVDGFVKE 316
PN TF LVDGF KE
Sbjct: 512 PNDHTFACLVDGFWKE 527
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
Query: 186 DEIFKKMKETGLIPNA----VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
+++ +M G+ PN + +LD LC+D ++EA K+F LM++ G +P + Y+A+++
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILD-LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMID 277
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY K A +++++ + PN + LV G CK L A V M++ G P
Sbjct: 278 GYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAI 326
N+ + L+ G K + EA G +
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLL 362
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 189 FKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
++ M GL+P+ + K GL + KL M G P + IYT + +
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
+K ++A+++F M+ +G+ PN ++Y+ ++ G CK ++ A+ E+L A PN+
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 306 FVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
F LVDGF K + + A+ +++ G
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFG 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M+ L P+ +++GLC + V EA +LF M+ + P Y +++
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY K + + A + +M ++G+ PN +++ L+ G C ++ A EM G
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
P++ T+ L+D KE + EA ++E G N+ +D
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++ +M +G+ PN + ++DG C ++ A+ L+ M KG +P++V YTA+
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + K +A R++ M GI PN ++ LV G K RL A +F E +
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
N F L++G + + A
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRA 568
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 77/148 (52%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
E+A + ++MK + +++L+GL + + LM +G +P++ IY + +
Sbjct: 149 EEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQC 208
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
K +++ +M S GI PN + YT+ + LC+ +++++A + M + G PN
Sbjct: 209 CFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPN 268
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
+ T+ ++DG+ K V +A G + ++
Sbjct: 269 LYTYSAMIDGYCKTGNVRQAYGLYKEIL 296
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++ M E G+ PN ++DG K+G + A+ + ++ + V +T +
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+EG + A R F M+S GI+P+ SY +++G + R+ D +M++ G
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Query: 300 SPNM 303
PN+
Sbjct: 616 LPNL 619
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E +++MK GL PN V+ ++D CK+G++Q+A+K + MR G +P YT++++
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K DA R+ +M G+ N +YT L+ GLC R+++A E +M AG PN+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ L+ GFVK + + A + L +G
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRG 502
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D FK M G P M+D +CK+G V+ A LF M+ +G +P+ V Y ++
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ K + DD F +M+ P+ +Y L+ CK +L EF EM G
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
PN+ ++ LVD F KE + +A + G V NE +D
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A +F++MK GL+P+ V +M+DG K G + + + F M++ P+++ Y A+
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + K K +R+M+ NG+ PN SY+ LV CK +Q A +F V+M G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA----KGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSV 355
PN T+ L+D K +++A ++ +E V + G D ++
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA-- 456
Query: 356 WEAIFGK 362
E +FGK
Sbjct: 457 -EELFGK 462
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + +M + G+ N V A++DGLC ++EA +LFG M G IP + Y A++
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ KA D A + +++ GI P+ Y + GLC +++ A EM E G
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 301 PNMTTFVDLVDGFVK 315
N + L+D + K
Sbjct: 540 ANSLIYTTLMDAYFK 554
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 196 GLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDA 252
GL NA AM+DGLCKD V+ A LF M +KG +P+ YT++++G K +A
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 253 KRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
+ KM G+ + +YT LV GL C++LQ A F EM+ G P+
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A+E+F KM G+IPN A++ G K + AL+L ++ +G P++++Y
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K + AK + +M+ GI N+ YT L+ K + EM E
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
+ TF L+DG K + V++A
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKA 596
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 182 PEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYT 237
P + + +MKE + + ++DGLCK+ LV +A+ F + + G I+T
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
A+++G K ++ + A +F +M G+ P+ +YT L+ G K + +A +M E
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
G ++ + LV G + +A+ + +I +G
Sbjct: 678 GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A+ L G+++EA++ F M+ P+ ++ + K K DD KR F+ M
Sbjct: 197 ALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA 256
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
G P F+Y +++ +CK ++ A EM G P+ T+ ++DGF K
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA+++ + M E + P+ V A+++ L K+G V EA +++G M +G P + Y +++
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G+ K + +DAKR+ M S SP+ +++ L+ G CK R+ + E EM G
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL-------DMKKPFS 352
N T+ L+ GF + + A+ + +I G N + L +++K F+
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFA 307
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+EI+ M G+ P + +M+DG CK + +A ++ M K P++V ++ ++
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY KA + D+ IF +M GI N +YT L+ G C+ L A + M+ +G +
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
PN TF ++ ++ + +A + L
Sbjct: 284 PNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A + KM+ET + + V A++D LCKDG A LF M +KG P+++ Y+ +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + ++ + DA+++ R M I+P+ +++ L+ L K ++ +A E +ML G
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
P T+ ++DGF K+ + +AK + ++ K
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +F +M + G+ P+ + M+D C+ G +A +L M E+ P++V ++A++
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K K +A+ I+ M GI P +Y ++ G CK RL DA M SP
Sbjct: 155 ALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
++ TF L++G+ K + V + +G V N
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 250
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 188 IFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
+ +M E G P +++GLCK G + AL L M E +VIY A+++ K
Sbjct: 32 LVDRMVEEGHQPYG-TIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDG 90
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFV 307
A+ +F +M GI P+ +Y+ ++ C+ R DA + +M+E +P++ TF
Sbjct: 91 HHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 308 DLVDGFVKEQGVAEAKGAIRTLIEKGF 334
L++ VKE V+EA+ ++ +G
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGI 177
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A+E+F M G P+ V +++G CK V+ +KLF M ++G + V YT +
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++GY +A K + A+ IFR+M G+ PN +Y VL+ GLC +++ A +M + G
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
++ T+ ++ G K VA+A +L +G +
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+E +++M L P+ V ++ GLC + EA ++FG M KG P++V Y+ ++
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY K+ K + ++F +M G+ N +YT+L+QG C+ +L A E M+ G
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
PN+ T+ L+ G + +A
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKA 415
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 191 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
KM + G P+ V ++L+G C+ V +AL +F M G P +VIY +++G K+
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFV 307
+ D+A + +M+ +GI P+ +Y L+ GLC R DA M + P++ TF
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 308 DLVDGFVKEQGVAEAKGAIRTLIEK 332
L+D VKE V+EA+ +I +
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRR 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA +F +M G PN V ++DGLCK V AL L M + G P++V Y +++
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G + + DA R+ M I P+ F++ L+ K R+ +A EF EM+
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFLDMKK 349
P++ T+ L+ G + EA+ ++ KG V + G+ KK
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++ +M++ G+ P+ V +++ GLC G +A ++ M ++ P++ + A+
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ K + +A+ + +M + P+ +Y++L+ GLC SRL +A E M+ G
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P++ T+ L++G+ K + V + ++G V N
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M + + P+ A++D K+G V EA + + M + P+IV Y+ ++
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G + D+A+ +F M S G P+ +Y++L+ G CK +++ + EM + G
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N T+ L+ G+ + + A+ R ++ G
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+ ++L LF M + +P I ++ ++ +K K D ++ +MQ GI N + +
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L+ C+CS+L A F +M++ GH P++ TF L++GF + V +A ++ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 334 F 334
+
Sbjct: 182 Y 182
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
++++M+ G+ N +L+ C+ + AL G M + G P IV + +++ G+
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ + DA +F +M G PN Y ++ GLCK ++ +A + M + G P++
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
T+ L+ G ++A + + ++
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKR 250
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+EI+K+M + P + +M+DG CK V +A ++ M KG P++V ++ ++
Sbjct: 98 EAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLI 157
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY KA + D+ IF +M GI N +YT L+ G C+ L A + EM+ G +
Sbjct: 158 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
P+ TF ++ G ++ + +A + L
Sbjct: 218 PDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +F +M E G+ PN + M+D C G +A +L M EK P+IV ++A++
Sbjct: 28 NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALI 87
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ K K +A+ I+++M I P +Y ++ G CK R+ DA M G S
Sbjct: 88 NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P++ TF L++G+ K + V + +G V N
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DAD++ + M E + P+ V A+++ K+ V EA +++ M P + Y +++
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G+ K + DDAKR+ M S G SP+ +++ L+ G CK R+ + E EM G
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N T+ L+ GF + + A+ + +I G
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%)
Query: 201 AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQ 260
+ A++D LCKDG A LF M EKG P ++ Y +++ + + + DA ++ R M
Sbjct: 13 STAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMI 72
Query: 261 SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVA 320
I+P+ +++ L+ K ++ +A E EML P T+ ++DGF K+ V
Sbjct: 73 EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVD 132
Query: 321 EAKGAIRTLIEKG 333
+AK + ++ KG
Sbjct: 133 DAKRMLDSMASKG 145
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%)
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
++VI TA+V+ K +A+ +F +M GI PN +Y ++ C R DA +
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
M+E +P++ TF L++ FVKE+ V+EA+ + ++
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 16/181 (8%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++FK+M G+ P+ + +LDGLC +G +++AL++F M++ +I IYT +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+EG KA K DD +F + G+ PN +Y ++ GLC LQ+A+ +M E G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAV-------------KGFLD 346
PN T+ L+ +++ A + IR + FV + + K FLD
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 631
Query: 347 M 347
M
Sbjct: 632 M 632
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M + G PN V +++GLCK G AL L M ++VI+ ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ K DDA +F++M++ GI PN +Y+ L+ LC R DA + +M+E +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ TF L+D FVKE EA+ +I++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
ED E+F++M GL+ + V ++ GL DG A K+F M G P+I+ Y+ +
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K + A +F MQ + I + + YT +++G+CK ++ D ++ + G
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
PN+ T+ ++ G ++ + EA ++ + E G
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 9/159 (5%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +FK+M+ G+ PN V +++ LC G +A +L M EK P +V + A+
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA---FEFCVEMLE 296
++ + K K +A++++ M I P+ F+Y LV G C RL A FEF M+
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF---MVS 393
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
P++ T+ L+ GF K + V + R + +G V
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA ++ M E + PN V A++D K+G EA KL+ M ++ P+I Y ++V
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + D AK++F M S P+ +Y L++G CK R++D E EM G
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ T+ L+ G + A+ + ++ G
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A ++F+ M P+ V ++ G CK V++ +LF M +G + + V YT +
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G D+A+++F++M S+G+ P+ +Y++L+ GLC +L+ A E M ++
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ + +++G K V + +L KG
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A++++ M + + P+ ++++G C + +A ++F M K P++V Y ++
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 297
+G+ K+ + +D +FR+M G+ + +YT L+QGL C Q F+ +M+
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK---QMVSD 464
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEA 322
G P++ T+ L+DG + +A
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKA 489
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + +M E G P+ + ++ GL EA+ L M ++G P +V Y VV
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G K D A + KM++ I + + ++ LCK + DA EM G
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ T+ L+ ++A + +IEK
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM + G P+ V ++L+G C + +A+ L M E G P+ + +T ++
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +KA +A + +M G PN +Y V+V GLCK A +M A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ F ++D K + V +A + + KG
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+++ C+ + AL L G M + G P IV ++++ GY + DA + +M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
P+ ++T L+ GL ++ +A M++ G PN+ T+ +V+G K
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 62/121 (51%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+ +A+ LFG M + +P IV + ++ K K D + KMQ I ++Y +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L+ C+ S++ A +M++ G+ P++ T L++G+ + +++A + ++E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 334 F 334
+
Sbjct: 186 Y 186
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +F M ++ +P+ V +L + K + L M+ + + Y +
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + + + A + KM G P+ + + L+ G C R+ DA +M+E G+
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P+ TF L+ G +EA + ++++G
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
EDA EI ++ G P + ++DGL K G +A+KL MR K P+ + Y+++
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V G ++ K D+A + F + + GI PNA ++ ++ GLCK + A +F V M+ G
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
PN T++ L++G E EA + L KG +
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A E+ +M + P+ + +++ C+D V A+KL MR++G P++V Y +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V G K + D+A + M S+G PN ++ ++++ +C R DA + +ML G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 300 SPNMTTFVDLVDGFVKEQGV 319
SP++ TF L++ F+ +G+
Sbjct: 341 SPSVVTFNILIN-FLCRKGL 359
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 151 GFDNKAGNS--SEVAASNLSEEAKSANS-NQPAMPEDADEIFK---KMKETGLIPNAV-- 202
G+ N GN S V +S E+ +S N Q + +E FK M G +P+ +
Sbjct: 81 GYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPC 140
Query: 203 -AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 261
++ G C+ G ++A K+ ++ G +P+++ Y ++ GY KA + ++A + +M
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199
Query: 262 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
+SP+ +Y +++ LC +L+ A E ML+ P++ T+ L++ ++ GV
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 322 A---------KGAIRTLIEKGFVVNEKAVKGFLD 346
A +G ++ +VN +G LD
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +I +KM + G PN+++ +L G CK+ + A++ M +G P+IV Y ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K K +DA I ++ S G SP +Y ++ GL K + A + EM P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
+ T+ LV G +E V EA
Sbjct: 483 DTITYSSLVGGLSREGKVDEA 503
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA+++ M G P+ V +++ LC+ GL+ A+ + M + G P + Y ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K K D A +M S G P+ +Y ++ LCK +++DA E ++ G S
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P + T+ ++DG K +A
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKA 468
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +M++ G P+ V +++G+CK+G + EA+K M G P ++ + ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ DA+++ M G SP+ ++ +L+ LC+ L A + +M + G P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N ++ L+ GF KE+ + A + ++ +G
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 69/132 (52%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+L LC G +++A+++ M ++ P+++ YT ++E + A ++ +M+
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G +P+ +Y VLV G+CK RL +A +F +M +G PN+ T ++ +A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 323 KGAIRTLIEKGF 334
+ + ++ KGF
Sbjct: 329 EKLLADMLRKGF 340
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +I + ++ +G +P+ + M+ G CK G + AL + M P++V Y ++
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILR 212
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ K A + +M P+ +YT+L++ C+ S + A + EM + G +P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 302 NMTTFVDLVDGFVKEQGVAEA---------KGAIRTLIEKGFVVNEKAVKG-FLD----- 346
++ T+ LV+G KE + EA G +I ++ G ++D
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 347 ---MKKPFSPSV 355
++K FSPSV
Sbjct: 333 ADMLRKGFSPSV 344
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + M +G PN + +L +C G +A KL M KG P +V + +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + A I KM +G PN+ SY L+ G CK ++ A E+ M+ G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P++ T+ ++ K+ V +A + L KG
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAV 239
+A + ++M G P+ V A+++GLCK G AL L M EKG I ++VIY+ V
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTV 246
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ K DDA +F +M + GI P+ F+Y+ L+ LC R DA +MLE
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGF 344
+PN+ TF L+D F KE + EA+ +I++ V + GF
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+++F +M + + PN V ++++G C + EA ++F LM K +P++V Y ++
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ KA K D +FR M G+ N +YT L+ G + S +A +M+ G
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
PN+ T+ L+DG K + +A
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKA 469
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 3/166 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M E + PN V +++D K+G + EA KLF M ++ P IV Y +++
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + D+A++IF M S P+ +Y L+ G CK ++ D E +M G
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
N T+ L+ GF + A+ + ++ G N LD
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +IF M +P+ V +++G CK V + ++LF M +G + V YT +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ +A D+A+ +F++M S+G+ PN +Y L+ GLCK +L+ A + ++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P++ T+ + +G K V + +L KG
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q + ++A +FK+M G+ PN + +LDGLCK+G +++A+ +F +++ P+I
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
Y + EG KA K +D +F + G+ P+ +Y ++ G CK ++A+ ++M
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
E G P+ T+ L+ +++ A + I+ +
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +F +M G+ P+ +++ LC G +A +L M E+ P +V + ++
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + K K +A+++F +M I PN +Y L+ G C RL +A + M+
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P++ T+ L++GF K + V + R + +G V N
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+ EA+ LFG M + P IV ++ ++ K K D KM+ G+S N ++Y +
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ LC+ S+L A +M++ G+ P++ T L++GF ++EA + ++E G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 334 F 334
+
Sbjct: 166 Y 166
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 190 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
+KM+ G+ N M++ LC+ + AL + G M + G P IV +++ G+
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
++ +A + +M G P+ ++T LV GL + ++ +A M+ G P++ T+
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 307 VDLVDGFVK 315
+++G K
Sbjct: 209 GAVINGLCK 217
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 188 IFKKMKETGLI--PNAVAM-LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
++++M E G+ P+A ++ + GLCK+G + E +F M KG+ P + IYT +++GY
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K+ +DA R+ +M G P+ +Y+V+V GLCK R+++A ++ G + N
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ L+DG K V EA+ + EKG + +D
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A + F + GL N++ +++DGL K G V EA +LF M EKG + Y A+
Sbjct: 414 EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 240 VEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ +TK K D+A +F++M+ G ++YT+L+ G+ K R ++A + M++ G
Sbjct: 474 IDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKG 533
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+P F L G VA A + L G +++
Sbjct: 534 ITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 188 IFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+F+ M G PN ++DG K G V++A++L M ++G P++V Y+ VV G
Sbjct: 349 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K + ++A F + +G++ N+ Y+ L+ GL K R+ +A EM E G + +
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
+ L+D F K + V EA + + E+
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 47/221 (21%)
Query: 159 SSEVAASNLSEEAKSANS-----NQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCK 210
SSE+ +AN+ + M E+ +++KMKE G+ P +++GL
Sbjct: 175 SSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVS 234
Query: 211 DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG------- 263
V A ++F +M P+IV Y +++GY KA + A R M++ G
Sbjct: 235 AMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKIT 294
Query: 264 ------------------------------ISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
+ P+AFS +++ GLCK +L + +
Sbjct: 295 YMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS--LVIGGLCKEGKLNEGYTVFEN 352
Query: 294 MLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
M+ G PN+ + L+DG+ K V +A + +I++GF
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Query: 180 AMPEDADEI------FKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEI 233
A+ +D D I KK + + A A++ K G+V+E L ++ M+E G P +
Sbjct: 163 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTL 222
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
Y ++ G A D A+R+F M+S I P+ +Y +++G CK + Q A E +
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 294 MLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVV 336
M GH + T++ ++ + + + EKG V
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQV 325
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 38/202 (18%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALK-------------------- 219
+ A+ +F+ M+ + P+ V M+ G CK G Q+A++
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 220 ---------------LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
L+ M EKG ++ V+ G K K ++ +F M G
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
PN YTVL+ G K ++DA M++ G P++ T+ +V+G K V EA
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 325 AIRTLIEKGFVVNEKAVKGFLD 346
T G +N +D
Sbjct: 419 YFHTCRFDGLAINSMFYSSLID 440
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A + M + GL+P+ +M+D LCK V+EA LF + +KG P +V+YTA+
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++GY KA K D+A + KM S PN+ ++ L+ GLC +L++A +M++ G
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P ++T L+ +K+ A + ++ G
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 37/192 (19%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMR-------------- 225
E A E+ +M E GL+PN + A+++G CK G++++A+ + LM
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 226 --------------------EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGIS 265
E+ +P++V Y ++++G ++ D A R+ M G+
Sbjct: 435 IKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 266 PNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGA 325
P+ ++YT ++ LCK R+++A + + + G +PN+ + L+DG+ K V EA
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 326 IRTLIEKGFVVN 337
+ ++ K + N
Sbjct: 555 LEKMLSKNCLPN 566
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ KM E ++P+ V +++DG C+ G A +L LM ++G +P+ YT++++
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K+ + ++A +F ++ G++PN YT L+ G CK ++ +A +ML PN
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
TF L+ G + + EA TL+E+ V
Sbjct: 569 TFNALIHGLCADGKLKEA-----TLLEEKMV 594
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A ++F +M G N VA ++ GLC + EA+ LF M++ P + YT +
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + + +A + ++M+ GI PN +YTVL+ LC + + A E +MLE G
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA----VKGF 344
PN+ T+ L++G+ K + +A + + + N + +KG+
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A++ K+ E GL P+ +++ G C+ + A K+F M KG V YT +
Sbjct: 235 EEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL 294
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G A + D+A +F KM+ + P +YTVL++ LC R +A EM E G
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
PN+ T+ L+D + +A+ + ++EKG + N
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 155 KAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNA---VAMLDGLCKD 211
K +EVA ++L A AM ++F KMK+ P ++ LC
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAM-----DLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 212 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSY 271
EAL L M E G P I YT +++ K + A+ + +M G+ PN +Y
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 272 TVLVQGLCKCSRLQDAFEFCVEMLEAGH-SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
L+ G CK ++DA + VE++E+ SPN T+ +L+ G+ K V +A G + ++
Sbjct: 397 NALINGYCKRGMIEDAVDV-VELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKML 454
Query: 331 EK 332
E+
Sbjct: 455 ER 456
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 3/170 (1%)
Query: 180 AMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
+ ++ +++ +M E + PN M++G CK G V+EA + + E G P+ Y
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTY 256
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
T+++ GY + D A ++F +M G N +YT L+ GLC R+ +A + V+M +
Sbjct: 257 TSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
P + T+ L+ + +EA ++ + E G N +D
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + +KM +PN++ A++ GLC DG ++EA L M + G P + T +
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ K D A F++M S+G P+A +YT +Q C+ RL DA + +M E G
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 300 SPNMTTFVDLVDGF 313
SP++ T+ L+ G+
Sbjct: 669 SPDLFTYSSLIKGY 682
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A ++F +++ G+ PN V A++DG CK G V EA + M K +P + + A+
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K +A + KM G+ P + T+L+ L K A+ +ML +G
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFLDM 347
P+ T+ + + +E + +A+ + + E G +KG+ D+
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + +KM + GL P ++ L KDG A F M GT P+ YT
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ Y + + DA+ + KM+ NG+SP+ F+Y+ L++G + AF+ M + G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGA 325
P+ TF+ L+ + E + KG+
Sbjct: 704 EPSQHTFLSLIKHLL-EMKYGKQKGS 728
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 184 DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+ DE F+ +K +I +L+ L + GLV E +++ M E P I Y +V GY
Sbjct: 170 NKDERFE-LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY 228
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K ++A + K+ G+ P+ F+YT L+ G C+ L AF+ EM G N
Sbjct: 229 CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE 288
Query: 304 TTFVDLVDGFVKEQGVAEA 322
+ L+ G + + EA
Sbjct: 289 VAYTHLIHGLCVARRIDEA 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 55/108 (50%)
Query: 233 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 292
I Y ++ + D+ K+++ +M + + PN ++Y +V G CK +++A ++
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 293 EMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA 340
+++EAG P+ T+ L+ G+ + + + A + KG NE A
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLM-REKGTIPEIVIYTAVVEG 242
E+ +KM E + PNA + ++ G+C+ G ++ A K+F M R +G P +++ A++
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
K K ++A ++ M G P S VL+ GL K + +L+ G+ +
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
+ ++DG V +QG+ EA + ++EK
Sbjct: 866 ELAWKIIIDG-VGKQGLVEAFYELFNVMEK 894
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 193 KETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDA 252
K+ G P AM + + D +V+ L M E P Y ++ G + A
Sbjct: 724 KQKGSEPELCAMSNMMEFDTVVE----LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 253 KRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVD 311
+++F MQ N GISP+ + L+ CK + +A + +M+ GH P + + L+
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 312 GFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
G K+ + L++ G+ +E A K +D
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAV 239
+A + ++M G P+ V A+++GLCK G AL L M EKG I ++VIY +
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTI 256
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K DDA +F KM++ GI P+ F+Y L+ LC R DA +MLE
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK-----GFVVNEKAVKGFLDMKK 349
+P++ F L+D FVKE + EA+ +++ V +KGF K+
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +FK+M G+ P+ + +LDGLC +G V+ AL +F M+++ +IV YT +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+E KA K +D +F + G+ PN +YT ++ G C+ ++A VEM E G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN T+ L+ +++ A + I+ + GF
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA ++F KM+ G+ P+ ++ LC G +A +L M EK P++V + A+
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 240 VEGYTKAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ + K K +A++++ +M +S P+ +Y L++G CK R+++ E EM + G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N T+ L+ GF + + A+ + ++ G
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 184 DADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+A++++ +M K P+ VA ++ G CK V+E +++F M ++G + V YT +
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ +A D+A+ +F++M S+G+ P+ +Y +L+ GLC ++ A M +
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ T+ +++ K V + +L KG
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 68/125 (54%)
Query: 210 KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 269
+D + +A+ LFG M + P IV ++ ++ K +K D + +MQ+ GIS N +
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 270 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
+Y++ + C+ S+L A +M++ G+ P++ T L++GF ++EA + +
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 330 IEKGF 334
+E G+
Sbjct: 172 VEMGY 176
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A I KM + G P+ V ++L+G C + EA+ L M E G P+ V +T +V
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G + +KA +A + +M G P+ +Y ++ GLCK A +M +
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ + ++DG K + + +A + KG
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 157 GNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGL 213
G ++ N+ + N N E A +F+ M++ + I M++ LCK G
Sbjct: 421 GVHPDIMTYNILLDGLCNNGN----VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
V++ LF + KG P +V YT ++ G+ + ++A +F +M+ +G PN+ +Y
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536
Query: 274 LVQGLCKCSRLQD-----AFEFCVEMLEAGHSPNMTTF 306
L++ +RL+D + E EM G + + +TF
Sbjct: 537 LIR-----ARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 156 AGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDG 212
AG SS+ NLS + Q +DA +F M ++ P+ V +L + K
Sbjct: 35 AGASSDDCRENLSRKVL-----QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMN 89
Query: 213 LVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT 272
+ L M+ G + Y+ + + + + A I KM G P+ +
Sbjct: 90 KFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLN 149
Query: 273 VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
L+ G C +R+ +A +M+E G+ P+ TF LV G + +EA + ++ K
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 333 G 333
G
Sbjct: 210 G 210
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 190 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
++M+ G+ N ++ C+ + AL + G M + G P IV +++ G+
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
++ +A + +M G P+ ++T LV GL + ++ +A M+ G P++ T+
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 307 VDLVDGFVK 315
+++G K
Sbjct: 219 GAVINGLCK 227
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 181 MPEDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
M +AD++F +M E L P++ + +DG CK G +Q A++LF M+EK ++V Y
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+++G+ K D AK I+ M S I P SY++LV LC L +AF EM+
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
P + ++ G+ + ++ + + +I +GFV
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 164 ASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKL 220
+S +S +S N ++ M F +KE GLIP+ V ++ G C+ G++ A+ L
Sbjct: 379 SSMMSLFTRSGNLDKALM------YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 221 FGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK 280
M ++G ++V Y ++ G K +A ++F +M + P++++ T+L+ G CK
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 281 CSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK-------- 332
LQ+A E +M E ++ T+ L+DGF K + AK ++ K
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 333 -GFVVNEKAVKGFLDMKKPFSPSVWEAIFGK 362
+VN KG L + F VW+ + K
Sbjct: 553 YSILVNALCSKGHL--AEAF--RVWDEMISK 579
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E+F +M +GL P++ ++L CK G V E K+F MR + +P++V ++++
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ +T++ D A F ++ G+ P+ YT+L+QG C+ + A EML+ G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ ++ T+ ++ G K + + EA + E+ + + +D
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A +++++ +G+ N M++ LCKDG +++ ++EKG P+IV Y +
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y+ ++A + M G SP ++Y ++ GLCK + + A E EML +G
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAK 323
SP+ TT+ L+ K+ V E +
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETE 360
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 188 IFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
I K +K T +I N+ M+ G C+ G + M +G +P+ + Y ++ G+ +
Sbjct: 577 ISKNIKPTVMICNS--MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 248 KADDAKRIFRKMQ--SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
A + +KM+ G+ P+ F+Y ++ G C+ +++++A +M+E G +P+ +T
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 306 FVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ +++GFV + + EA ++++GF
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+ +++F M+ ++P+ V +M+ + G + +AL F ++E G IP+ VIYT ++
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY + A + +M G + + +Y ++ GLCK L +A + EM E
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
P+ T L+DG K + A + + EK ++ LD
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREK--GTIPEIVIYTA 238
D + +KM G +P+ ++ ++ G ++ + +A L M E+ G +P++ Y +
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ G+ + ++ +A+ + RKM G++P+ +YT ++ G L +AF EML+ G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 299 HSPN 302
SP+
Sbjct: 723 FSPD 726
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 157 GNSSEVAASNLSEEAKSANSNQPAMPEDAD-----EIFKKMKETGLIPNAVA---MLDGL 208
G E++ S + + N A+ +D +++E G+ P+ V ++
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 209 CKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNA 268
GL++EA +L M KG P + Y V+ G K K + AK +F +M +G+SP++
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 269 FSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRT 328
+Y L+ CK + + + +M P++ F ++ F + + +A +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 329 LIEKGFV 335
+ E G +
Sbjct: 401 VKEAGLI 407
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 60/121 (49%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
++EA + F L+R KG I A++ + + A +++++ +G+ N ++ +
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+V LCK +++ F ++ E G P++ T+ L+ + + + EA + + KG
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 334 F 334
F
Sbjct: 301 F 301
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M + G PN V +++GLCK G + A L M ++VI+ ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ K DDA +F++M++ GI PN +Y+ L+ LC R DA + +M+E +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 301 PNMTTFVDLVDGFVKEQGVAEAK 323
PN+ TF L+D FVKE EA+
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAE 275
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 16/181 (8%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++FK+M G+ P+ + +LDGLC +G +++AL++F M++ +I IYT +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+EG KA K DD +F + G+ PN +Y ++ GLC LQ+A+ +M E G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAV-------------KGFLD 346
P+ T+ L+ +++ A + IR + FV + + K FLD
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 556
Query: 347 M 347
M
Sbjct: 557 M 557
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
ED E+F++M GL+ + V ++ GL DG A K+F M G P+I+ Y+ +
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K + A +F MQ + I + + YT +++G+CK ++ D ++ + G
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
PN+ T+ ++ G ++ + EA ++ + E G
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +FK+M+ G+ PN V +++ LC G +A +L M EK P +V + A+
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA---FEFCVEMLE 296
++ + K K +A+++ M I P+ F+Y L+ G C RL A FEF M+
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF---MVS 318
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
P++ T+ L+ GF K + V + R + +G V
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA ++ M E + PN V A++D K+G EA KL M ++ P+I Y +++
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + D AK++F M S P+ +Y L++G CK R++D E EM G
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ T+ L+ G + A+ + ++ G
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 70/131 (53%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++ G CK V++ +LF M +G + + V YT +++G D+A+++F++M S+
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G+ P+ +Y++L+ GLC +L+ A E M ++ ++ + +++G K V +
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 323 KGAIRTLIEKG 333
+L KG
Sbjct: 450 WDLFCSLSLKG 460
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM + G P+ V ++L+G C + +A+ L M E G P+ + +T ++
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +KA +A + +M G PN +Y V+V GLCK + AF +M A
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ F ++D K + V +A + + KG
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++++G C + +A ++F M K P++ Y +++G+ K+ + +D +FR+M
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 263 GISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGV 319
G+ + +YT L+QGL C Q F+ +M+ G P++ T+ L+DG +
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFK---QMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 320 AEA 322
+A
Sbjct: 412 EKA 414
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + +M E G P+ + ++ GL EA+ L M ++G P +V Y VV
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G K D A + KM++ I + + ++ LCK + DA EM G
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ T+ L+ ++A + +IEK
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 190 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
+KM+ G+ N +++ C+ + AL L G M + G P IV ++++ GY
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
+ DA + +M G P+ ++T L+ GL ++ +A M++ G PN+ T+
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 307 VDLVDGFVK 315
+V+G K
Sbjct: 154 GVVVNGLCK 162
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%)
Query: 230 IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 289
+P I + ++ K K D + KMQ GIS N ++Y +L+ C+ S++ A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 290 FCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+M++ G+ P++ T L++G+ + +++A + ++E G+
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 111
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 9/133 (6%)
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
M+ G + Y ++ + + + A + KM G P+ + + L+ G C R
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA---------KGAIRTLIEKGF 334
+ DA +M+E G+ P+ TF L+ G +EA +G L+ G
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 335 VVNEKAVKGFLDM 347
VVN +G +D+
Sbjct: 156 VVNGLCKRGDIDL 168
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+F++M+ G P+ ++D LC G + EAL + M G ++ Y +++
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ KA+K +A+ IF +M+ +G+S N+ +Y L+ GLCK R++DA + +M+ G P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ T+ L+ F + + +A ++ + G
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A E+ +M PN V ++ LCK+ V+EA +L ++ KG +P++ + ++
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G A +F +M+S G P+ F+Y +L+ LC +L +A +M +G
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAK 323
+ ++ T+ L+DGF K EA+
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAE 490
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A E+ + + G++P+ +++ GLC + A++LF MR KG P+ Y +
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ K D+A + ++M+ +G + + +Y L+ G CK ++ ++A E EM G
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
S N T+ L+DG K + V +A + +I +G
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 183 EDADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
EDA ++M + G P+ +++GLCK G V+ A+++ +M ++G P++ Y +
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
V+ G K + +A + +M + SPN +Y L+ LCK +++++A E + G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 299 HSPNMTTFVDLVDGF 313
P++ TF L+ G
Sbjct: 396 ILPDVCTFNSLIQGL 410
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+EIF +M+ G+ N+V ++DGLCK V++A +L M +G P+ Y +++
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ + A I + M SNG P+ +Y L+ GLCK R++ A + + G +
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
+ ++ G +++ EA R ++E+
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A EI M + G P+ +++ GLCK G V+EA+++ M + P V Y ++
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K ++ ++A + R + S GI P+ ++ L+QGLC + A E EM G P
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
+ T+ L+D + + EA ++ +
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 191 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
KM G+ P+ ++ LC+ ++ A+ + M G +P+ +T V++GY +
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGHSPNMTTF 306
D A RI +M G S + S V+V G CK R++DA F EM + G P+ TF
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 307 VDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
LV+G K V A + ++++G+
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + K+M+ +G + + ++DG CK +EA ++F M G V Y +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K+ + +DA ++ +M G P+ ++Y L+ C+ ++ A + M G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
P++ T+ L+ G K V A +R++ KG
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
EDA ++ +M G P+ ++L C+ G +++A + M G P+IV Y +
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G KA + + A ++ R +Q GI+ +Y ++QGL + + +A EMLE
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 300 S-PNMTTFVDLVDGFVKEQG-VAEAKGAIRTLIEKGFV 335
+ P+ ++ + G G + EA + L+EKGFV
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
Query: 182 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P A MKE G+ P+ + ++DGL + G ++ M + G P++V YT
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ GY + + D AK +FR+M G PN F+Y +++GLC ++A EM G
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+PN + LV K ++EA+ IR +++KG V+
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVH 463
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 186 DEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
+ ++K+M E G P+ + +L + G + +LF M G P+ Y ++
Sbjct: 239 EWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI 298
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
K +K A M+ GI P+ YT L+ GL + L+ F EM++AG P+
Sbjct: 299 LGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPD 358
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG-----FVVNEKAVKGFLDMKKPFSPSVW 356
+ + ++ G+V + +AK R + KG F N ++G L M F + W
Sbjct: 359 VVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS-MIRG-LCMAGEFREACW 415
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 183 EDADEIFKKMKET-GLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
+DA + M + G++P+ +++ G K+GLV AL++ MR KG P + YT
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+V+G+ K K D+A + +M ++G+ PN + L+ CK R+ +A E EM G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P++ TF L+ G + + A +R +I +G V N
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 136 VVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANS-----NQPAMPEDADEIFK 190
+ N L F+ +L D KA S V + + + + NS + + A E+
Sbjct: 355 IFNTLIHGFVTHGRLD-DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 191 KMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
M+ G PN + ++DG CK G + EA + M G P V + ++ + K H
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFV 307
+ +A IFR+M G P+ +++ L+ GLC+ ++ A +M+ G N T+
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 308 DLVDGFVKEQGVAEAKGAIRTLIEKG 333
L++ F++ + EA+ + ++ +G
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQG 559
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A +F+KM G P+ ++ +++GLC+ G+V+EA++ M +G+ P+IV + ++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G +A + +D +FRK+Q+ GI P+ ++ L+ LCK + DA E +E G
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 300 SPNMTTFVDLVDGFVKEQ 317
PN T+ L+ + ++
Sbjct: 701 VPNHRTWSILLQSIIPQE 718
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + + M G++ N V +++ + G ++EA KL M +G+ + + Y ++++
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +A + D A+ +F KM +G +P+ S +L+ GLC+ +++A EF EM+ G +P
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ TF L++G + + + R L +G
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 43/189 (22%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A ++ +M G P+ + +++GLCK G V A LF + + PEIVI+ ++
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLI 360
Query: 241 EGYTKAHKADDAK------------------------------------RIFRKMQSNGI 264
G+ + DDAK + M++ G
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
PN +SYT+LV G CK ++ +A+ EM G PN F L+ F KE + EA
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 325 AIRTLIEKG 333
R + KG
Sbjct: 481 IFREMPRKG 489
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 173 SANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGT 229
SA + +PE A EIF++M G P+ +++ GLC+ ++ AL L M +G
Sbjct: 467 SAFCKEHRIPE-AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 230 IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 289
+ V Y ++ + + + +A+++ +M G + +Y L++GLC+ + A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 290 FCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ML GH+P+ + L++G + V EA + ++ +G
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + +M GL PN V ++ CK+ + EA+++F M KG P++ + ++
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G + + A + R M S G+ N +Y L+ + +++A + EM+ G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ T+ L+ G + V +A+ ++ G
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
Query: 169 EEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKG 228
E S N ++ A D + +K+ T L V M C + AL L M + G
Sbjct: 190 EILVSGNCHKVAANVFYDMLSRKIPPT-LFTFGVVM-KAFCAVNEIDSALSLLRDMTKHG 247
Query: 229 TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAF 288
+P VIY ++ +K ++ ++A ++ +M G P+A ++ ++ GLCK R+ +A
Sbjct: 248 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 307
Query: 289 EFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
+ ML G +P+ T+ L++G K V AK + + V+ + GF+
Sbjct: 308 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++ GLC+ G V +A LF M G P + ++ G ++ ++A ++M
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G +P+ ++ L+ GLC+ R++D ++ G P+ TF L+ K V +A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 323 KGAIRTLIEKGFVVNEKAVKGFLDMKKP 350
+ IE GFV N + L P
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIP 716
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 177 NQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEI 233
N+ +P A E+ K+MK+ G+ PN V +++ GLCK G + +A + M K P +
Sbjct: 61 NRLVVP--ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
+ ++A+++ Y K K +++ M I PN F+Y+ L+ GLC +R+ +A +
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 294 MLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA----VKGFL 345
M+ G +PN+ T+ L +GF K V + + + ++G N + +KG+
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Query: 191 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
KM + G+ P+ V ++++G C +++A+ + G M + G ++V+ T +++ K
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFV 307
A + ++M+ GISPN +Y+ L+ GLCK RL DA EM +PN+ TF
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 308 DLVDGFVKEQGVAEAKGAIRTLIE 331
L+D + K +++ + +I+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQ 146
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
D ++K M + + PN +++ GLC V EA+K+ LM KG P +V Y+ +
Sbjct: 137 VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLAN 196
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ K+ + DD ++ M G++ N S L++G + ++ A M G P
Sbjct: 197 GFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP 256
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
N+ ++ ++ G V +A
Sbjct: 257 NIRSYNIVLAGLFANGEVEKA 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D ++ M + G+ N V+ ++ G + G + AL +FG M G IP I Y V
Sbjct: 205 DDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIV 264
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
+ G + + A F MQ + +YT+++ G+CK +++A++
Sbjct: 265 LAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDL 315
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M + G PN V +++GLCK G + A L M +VIY+ V+
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ K DDA +F +M++ G+ PN +Y+ L+ LC R DA +M+E +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ TF L+D FVKE + EA+ +I++
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M E + PN V A++D K+G + EA KL+ M ++ P+I Y++++
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + D+AK +F M S PN +Y L+ G CK R+ + E EM + G
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
N T+ L+ GF + + A+ + ++ G N LD
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +F+ M PN V +++G CK + E ++LF M ++G + V YT +
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ +A D+A+ +F++M S+G+ PN +Y L+ GLCK +L+ A + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGF 344
P + T+ +++G K V + +L KG ++ + GF
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +F +M+ G+ PN + +++ LC +A +L M E+ P +V + A+
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + K K +A++++ +M I P+ F+Y+ L+ G C RL +A M+
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
PN+ T+ L++GF K + + E R + ++G V N
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A++++ +M + + P+ ++++G C + EA +F LM K P +V Y ++
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 297
G+ KA + D+ +FR+M G+ N +YT L+ G + C Q F+ +M+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK---QMVSD 464
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEA 322
G PN+ T+ L+DG K + +A
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM+ + N V ++D LCK +AL LF M KG P ++ Y++++
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ DA R+ M I+PN ++ L+ K +L +A + EM++ P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK----GFVVNEKAVKGFLDMKK 349
++ T+ L++GF + EAK +I K V + GF K+
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +FK+M G+ PN + +LDGLCK+G +++A+ +F ++ P I Y +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+EG KA K +D +F + G+ P+ Y ++ G C+ ++A +M E G
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 300 SPNMTT 305
P+ T
Sbjct: 572 LPDSGT 577
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + +M E G P+ + ++ GL EA+ L M ++G P +V Y VV
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G K D A + KM++ I N Y+ ++ LCK DA EM G
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ T+ L+ + ++A + +IE+
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 64/121 (52%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+ +A+ LFG M + +P I + ++ K K D + KMQ GIS N ++Y +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L+ C+ S++ A +M++ G+ P++ T L++G+ + +++A + ++E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 334 F 334
+
Sbjct: 186 Y 186
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM + G P+ V ++L+G C + +A+ L M E G P+ + +T ++
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +KA +A + +M G PN +Y V+V GLCK + AF +M A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 302 NMTTFVDLVDGFVK 315
N+ + ++D K
Sbjct: 259 NVVIYSTVIDSLCK 272
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 190 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
+KM+ G+ N +++ C+ + AL L G M + G P IV ++++ GY
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
+ DA + +M G P+ ++T L+ GL ++ +A M++ G PN+ T+
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 307 VDLVDGFVK 315
+V+G K
Sbjct: 229 GVVVNGLCK 237
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A++ FK + E +PN V A++DGLCK G + A + M EK IP +V Y++++
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY K ++A + RKM+ + PN F+Y ++ GL K + + A E EM G
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
N LV+ + + E KG ++ ++ KG +++ +D+
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDV 513
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ ++M+E + PN V ++D L K + + AL L+ M +G ++V+YT +++G
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
KA +A++ F+ + + PN +YT LV GLCK L A +MLE PN+
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
T+ +++G+VK+ + EA +R + ++ V N
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 186 DEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
+E ++ M +G P+ V ++++ LCK G V E L M E P V YT +V+
Sbjct: 244 EEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDS 303
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
KA+ A ++ +M GI + YTVL+ GL K L++A + +LE PN
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPN 363
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+ T+ LVDG K ++ A+ I ++EK + N
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 189 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
+ M E G+ PN ++ GL GL++E K M+ +G P+ Y A++ G K
Sbjct: 736 YSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAK 795
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
+ I+ +M ++G+ P +Y VL+ ++ A E EM + G SPN +T
Sbjct: 796 IGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTST 855
Query: 306 FVDLVDGFV------------KEQGVAEAKGAIRTLI-EKGFV 335
+ ++ G K +AEAKG ++ ++ EKG++
Sbjct: 856 YCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYI 898
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 160 SEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQE 216
+ V + L + AN + A+ ++ +M G+ + V ++DGL K G ++E
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALA-----LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLRE 347
Query: 217 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 276
A K F ++ E +P +V YTA+V+G KA A+ I +M + PN +Y+ ++
Sbjct: 348 AEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN 407
Query: 277 GLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
G K L++A +M + PN T+ ++DG K
Sbjct: 408 GYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFK 446
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
Query: 174 ANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI 230
A + M + A + M+ G IP+ V +++ G V++AL + +M E G
Sbjct: 686 ATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS 745
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
P + Y ++ G + A + + +M+S G+ P+ F+Y L+ G K ++ +
Sbjct: 746 PNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
EM+ G P +T+ L+ F + +A+ ++ + ++G
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRG 848
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+ I +M E +IPN V +M++G K G+++EA+ L M ++ +P Y V++
Sbjct: 383 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 442
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G KA K + A + ++M+ G+ N + LV L + R+++ +M+ G +
Sbjct: 443 GLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 502
Query: 302 NMTTFVDLVDGFVK 315
+ + L+D F K
Sbjct: 503 DQINYTSLIDVFFK 516
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 31/241 (12%)
Query: 137 VNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETG 196
+N L SF +L F + ++ ++ + + + ++A + +M + G
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMG 191
Query: 197 LIPNAVA---MLDGLCKDG-------LVQEALKL------------FGL---------MR 225
++P+ V+ ++DG CK G LV E +L + L M
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMV 251
Query: 226 EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQ 285
G P++V +++++ K K + + R+M+ + PN +YT LV L K + +
Sbjct: 252 MSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYR 311
Query: 286 DAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
A +M+ G ++ + L+DG K + EA+ + L+E V N +
Sbjct: 312 HALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALV 371
Query: 346 D 346
D
Sbjct: 372 D 372
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 211 DGLVQEALKL-FGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 269
+GLV + + L + M G P++ ++ + K + A + R + IS +
Sbjct: 106 NGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTV 162
Query: 270 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
+Y ++ GLC+ +A++F EM++ G P+ ++ L+DGF K AK + +
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 330 IEKGFVVNEKAVKGFLDM 347
E + + + + ++
Sbjct: 223 SELNLITHTILLSSYYNL 240
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 192 MKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 248
M+E G+ + V+ ++ G+ K G V G MREKG P+I + ++ K
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGD 588
Query: 249 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVD 308
++ +++ KM+S GI P+ S ++V LC+ ++++A +M+ PN+TT+
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 309 LVD 311
+D
Sbjct: 649 FLD 651
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E +++ KMK G+ P+ ++ ++ LC++G ++EA+ + M P + Y
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ +K +AD + + S GI + Y L+ LCK + A +M G
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
P+ TF L+ G+ V +A ++E G
Sbjct: 710 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ M G +P+ ++ +L+ LC+ ++EA KL M+ KG P++V Y ++
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ + +A DA+++ M SNG SPN+ SY L+ GLC + ++ EM+ G SP
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ + LV GF V EA + +++ G
Sbjct: 364 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F KM E ++P+ + ++ G C+ G V A++L M KG +P+ + YT ++
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ + +A ++ +M+ G +P+ Y ++ G C+ R DA + +ML G SP
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFLDMKK 349
N ++ L+ G + E K + +I KG F V+ VKGF K
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A E+FK + G++PN + ++ C + + A +LFG M E+ +P++ Y +
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ + + + A + M + G P+ SYT L+ LC+ ++L++A++ M G
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+P++ + ++ GF +E +A+ + ++ G
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNG 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 178 QPAMPEDADEIFKKMKETGLIP---NAVAMLDGLCKD-GLVQEALKLFGLMREKGTIPEI 233
+ +PE F KM E P + +LD L G +Q+A +LF R G +P
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNT 190
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
Y +++ + A ++F KM + P+ SY +L+QG C+ ++ A E +
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 294 MLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
ML G P+ ++ L++ ++ + EA + + KG
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 252 AKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVD 311
A +F+ + +G+ PN SY +L+Q C L A++ +MLE P++ ++ L+
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 312 GFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
GF ++ V A + ++ KGFV + + L+
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++L G C+ G + EA + M E G P+IV YT ++ GY A K DA + R M+
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRR 316
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G PNA YTVL+Q LCK R+++A + VEM ++ T+ LV GF K + +
Sbjct: 317 GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC 376
Query: 323 KGAIRTLIEKGFVVNE 338
+ +I+KG + +E
Sbjct: 377 YIVLDDMIKKGLMPSE 392
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 51/275 (18%)
Query: 139 KLGDSFLDKFKLGFDNKAGNSSEVA-ASNLSEEAKSANSNQPAMPEDADEIFKKMKETGL 197
++G K+ L N+AG ++ +NL + AN+ + A DA ++ + M+ G
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLL--SGYANAGKMA---DAYDLLRDMRRRGF 318
Query: 198 IPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKR 254
PNA ++ LCK ++EA+K+F M ++V YTA+V G+ K K D
Sbjct: 319 EPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYI 378
Query: 255 IFRKMQSNGISPNAFSYT-----------------------------------VLVQGLC 279
+ M G+ P+ +Y V+++ C
Sbjct: 379 VLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLAC 438
Query: 280 KCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG-FVVNE 338
K +++A EM E G SP + TFV +++G + + EA + ++ +G F V++
Sbjct: 439 KLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQ 498
Query: 339 KAVKGFL------DMKKPFSPSVWEAIFGKKAPQM 367
L D K + VW I K A ++
Sbjct: 499 YGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACEL 533
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKG--TIPEIVIYT 237
++A ++ +M+E GL P V M++GL G + EA F M +G ++ +
Sbjct: 444 KEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLK 503
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISP-NAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
++ K K + AK ++ + S G N S+T+ + L ++A +C+EM+E
Sbjct: 504 LLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIE 563
Query: 297 AGHSPNMTTFVDLVDGFVK 315
P TF L+ G K
Sbjct: 564 MDFMPQPDTFAKLMKGLKK 582
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+ + K+M + G+ P+ + ++DGLCK G++ +A + GLM+ G P+ V Y ++
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY K D AK + ++M N PNA++ +L+ L K R+ +A E +M E G+
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
+ T +VDG G E AI I KG V+ A G L
Sbjct: 464 LDTVTCNIIVDGLC---GSGELDKAIE--IVKGMRVHGSAALGNL 503
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 184 DADEIFKKMKETGLI----PNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
DA IF M+ + PN++ ML G CK GL+++A LF +RE + + Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
++G + K +A+ + ++M GI P+ +SY +L+ GLCK L DA M
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
G P+ T+ L+ G+ V AK ++ ++ + N
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 180 AMPEDADEIFKKMKET---GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
+ EDA +F+ ++E + + L GL + G EA + M +KG P I Y
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
+++G K DAK I M+ NG+ P+A +Y L+ G C ++ A EM+
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN T L+ K ++EA+ +R + EKG+
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+F +M E G PN ++ G CK GL + L+L M G +P VIY +V
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH-- 299
+ + + DD++++ KM+ G+ P+ ++ + LCK ++ DA +M +
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 300 --SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
PN T+ ++ GF K + +AK ++ E
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
++K M G+ P ++ LC V A +LF M EKG P + +V GY
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
KA D + M+S G+ PN Y +V C+ R D+ + +M E G P++
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 305 TFVDLVDGFVKEQGVAEA 322
TF + KE V +A
Sbjct: 254 TFNSRISALCKEGKVLDA 271
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +F +M L P++VA + CK G + A ++ M +KG + Y +++
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G ++ + + +M+ GISPN +Y +Q LC+ +++DA EM++ +
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA 661
Query: 301 PNMTTFVDLVDGFVK 315
PN+ +F L++ F K
Sbjct: 662 PNVFSFKYLIEAFCK 676
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 37/172 (21%)
Query: 212 GLVQEALKLFGLM---REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNA 268
G+ + ++ GLM +EKG P I Y ++ + K +DA + +M I+PN
Sbjct: 605 GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNV 664
Query: 269 FSYTVLVQGLCKCSRL---QDAFEFCV---------------EMLEAGHSPNMT------ 304
FS+ L++ CK Q+ FE V E+L AG T
Sbjct: 665 FSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAV 724
Query: 305 --------TFV--DLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
TF+ DLV+ K+ + A G + +I++G+ + A+ +D
Sbjct: 725 LDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVID 776
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
P + +Y ++E K + + +++ M GI+P +++ +L++ LC S + A E
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVK 315
EM E G PN TF LV G+ K
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCK 194
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+L+ K+ V+ L+ M G P+ + ++ + D A+ +F +M G
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
PN F++ +LV+G CK E M G PN + +V F +E +++
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237
Query: 324 GAIRTLIEKGFV 335
+ + E+G V
Sbjct: 238 KMVEKMREEGLV 249
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+F MKE G + + A ++DG CK G V +A +L M+ KG P +V Y +V++G
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K + D+A +F + +S I N Y+ L+ G K R+ +A+ E+++ G +PN+
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
T+ L+D VK + + EA +++ E
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKE 720
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
PE +F+++K +P+A + ++ GL K G E +LF M+E+G + + Y
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
V++G+ K K + A ++ +M++ G P +Y ++ GL K RL +A+ E
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
N+ + L+DGF K + EA + L++KG N LD
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +F++ K + N V +++DG K G + EA + + +KG P + + ++
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ KA + ++A F+ M+ +PN +Y +L+ GLCK + AF F EM + G
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAI 326
P+ ++ ++ G K +AEA GA+
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEA-GAL 784
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 20/188 (10%)
Query: 188 IFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+F++M+E G P ++ G K+G V AL L M+ +IV+Y ++ +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K K D A + F ++++NG+ P+ +YT ++ LCK +RL +A E + + P
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 305 TFVDLVDGFVKEQGVAE---------AKGAIRTLIEKGFVVN--------EKAVKGFLDM 347
+ ++ G+ E AKG+I ++I ++ ++A+K F +M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 348 KKPFSPSV 355
KK +P++
Sbjct: 370 KKDAAPNL 377
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
ED +I+K M P+ + +D + K G ++ +F ++ + +P+ Y+ +
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G KA A++ +F M+ G + +Y +++ G CKC ++ A++ EM G
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA----KGAIRTLIEKGFVVNEKAVKGF 344
P + T+ ++DG K + EA + A IE V+ + GF
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 161 EVAASNLSEEAKSANSNQPAMPEDADEI------FKKMKETGLIPNAVA---MLDGLCKD 211
E+ L+ + NS A+ + A+EI F+ MKE PN V +++GLCK
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVK-AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 212 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSY 271
+A + M+++G P + YT ++ G KA +A +F + ++NG P++ Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 272 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
+++GL +R DAF E G + T V L+D K + +A L E
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860
Query: 332 KG 333
G
Sbjct: 861 TG 862
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A I +++ + GL PN ++LD L K + EAL F M+E P V Y +
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K K + A +++MQ G+ P+ SYT ++ GL K + +A G
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
P+ + +++G +A +G ++ K LD
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLD 840
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A E+ M++ GL PN M+D LCK + EA +F M K P+ + + ++
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K + DDA +++ KM + N+ YT L++ R +D + +M+
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD--MKKPFSPSVWE 357
SP++ +D K + + + + FV + ++ + +K F+ +E
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 358 AIFGKK 363
+ K
Sbjct: 574 LFYSMK 579
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++F++MK+ PN ++D LC+ G + A +L M++ G P + +
Sbjct: 360 DEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V+ K+ K D+A +F +M +P+ ++ L+ GL K R+ DA++ +ML++
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 300 SPNMTTFVDLVDGF 313
N + L+ F
Sbjct: 479 RTNSIVYTSLIKNF 492
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA ++++KM ++ N++ +++ G ++ K++ M + P++ +
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ KA + + + +F ++++ P+A SY++L+ GL K + +E M E G
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ + ++DGF K V +A + + KGF
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 3/133 (2%)
Query: 186 DEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
D+I +M G P+ + M+ G K ++E + +MR+ P YT ++
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
++ + +D +F++MQ G P +T L++G K R+ A EM + +
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Query: 303 MTTFVDLVDGFVK 315
+ + +D F K
Sbjct: 238 IVLYNVCIDSFGK 250
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M G P+ V +++GLCK G A L M + P ++IY ++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G K DDA +F++M++ GI PN +Y+ L+ LC R DA +M+E +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKG----AIRTLIEKGFVVNEKAVKGF 344
P++ TF L+D FVKE + EA+ ++ I+ V + GF
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +FK+M+ G+ PN V +++ LC G +A +L M E+ P++ ++A+
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA---FEFCVEMLE 296
++ + K K +A++++ +M I P+ +Y+ L+ G C RL +A FEF M+
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF---MVS 389
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P++ T+ L+ GF K + V E R + ++G V N
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ E+F++M + GL+ N V ++ GL + G A ++F M G P I+ Y +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K K + A +F +Q + + P ++Y ++++G+CK +++D ++ + G
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P++ + ++ GF ++ EA + + E G + N
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 80/145 (55%), Gaps = 9/145 (6%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A++++ +M + + P+ V ++++G C + EA ++F M K P++V Y ++
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 297
+G+ K + ++ +FR+M G+ N +Y +L+QGL + C Q+ F+ EM+
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK---EMVSD 460
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEA 322
G PN+ T+ L+DG K + +A
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A EIFK+M G+ PN + +LDGLCK+G +++A+ +F ++ P I Y ++E
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G KA K +D +F + G+ P+ +Y ++ G C+ ++A EM E G P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 302 NMTTFVDLV-----DG-------FVKEQ------GVAEAKGAIRTLIEKGFVVNEKAVKG 343
N + L+ DG +KE G A G + ++ G + K
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG-----RLDKS 624
Query: 344 FLDM 347
FLDM
Sbjct: 625 FLDM 628
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM++ L P + ++DGLCK + +AL LF M KG P +V Y++++
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ DA R+ M I+P+ F+++ L+ K +L +A + EM++ P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK----GFVVNEKAVKGFLDMKK 349
++ T+ L++GF + EAK ++ K V +KGF K+
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++F+ M P+ V ++ G CK V+E +++F M ++G + V Y +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G +A D A+ IF++M S+G+ PN +Y L+ GLCK +L+ A + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P + T+ +++G K V + L KG
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M E + P+ A++D K+G + EA KL+ M ++ P IV Y++++
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + D+AK++F M S P+ +Y L++G CK R+++ E EM + G
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
N T+ L+ G + A+ + ++ G N LD
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M TG PN V ++ GL EA+ L M KG P++V Y VV
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G K D A + KM+ + P Y ++ GLCK + DA EM G
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ T+ L+ ++A + +IE+
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM + G PN V ++L+G C + EA+ L M G P V + ++
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +KA +A + +M + G P+ +Y V+V GLCK AF +M + P
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 254
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ + ++DG K + + +A + + KG
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 208 LCKDGL----VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
L ++GL + +A+ LFG M + P I+ ++ ++ K +K D + +MQ+ G
Sbjct: 52 LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
I N ++Y++L+ C+ S+L A +M++ G+ PN+ T L++G+ + ++EA
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 324 GAIRTLIEKGF 334
+ + G+
Sbjct: 172 ALVDQMFVTGY 182
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 55/112 (49%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+++ C+ + AL + G M + G P IV ++++ GY + + +A + +M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
PN ++ L+ GL ++ +A M+ G P++ T+ +V+G K
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 3/167 (1%)
Query: 170 EAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMRE 226
E S N +DA +F +M ++ P+ + +L + K + L M+
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109
Query: 227 KGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD 286
G Y+ ++ + + + A + KM G PN + + L+ G C R+ +
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 287 AFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
A +M G+ PN TF L+ G +EA I ++ KG
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + +MK G+ + M+DGLCK+G + EA+ L M + G P+IV Y+A++
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ K + AK I ++ G+SPN Y+ L+ C+ L++A M+ GH+
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+ TF LV K VAEA+ +R + G + N
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 582
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +M GL PN V A++DG +G +EALK+F +M KG P V Y +++
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K + D A+ + +M+ NG+ +YT ++ GLCK L +A EM + G P
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ T+ L++GF K AK + + G
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++F M+ GL P+ V+ +LDGLCK+ A + M+ G + YT +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K D+A + +M +GI P+ +Y+ L+ G CK R + A E + G
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
SPN + L+ + + EA +I +G
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E + + +KM+++G P V +L CK G + A++L M+ KG ++ Y +
Sbjct: 250 EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML 309
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ ++++ + R M+ I PN +Y L+ G ++ A + EML G
Sbjct: 310 IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 369
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
SPN TF L+DG + E EA + KG +E + LD
Sbjct: 370 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A EI ++ GL PN + ++ C+ G ++EA++++ M +G + + +
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V KA K +A+ R M S+GI PN S+ L+ G AF EM + GH
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
P T+ L+ G K + EA+ +++L
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Query: 189 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
K+M + + P+ +++ LC +G +++ L M + G P IV Y V+ Y K
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
+ A + M+S G+ + +Y +L+ LC+ +R+ + +M + PN T
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 306 FVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ L++GF E V A + ++ G N +D
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ + M++ + PN V +++G +G V A +L M G P V + A+++G+
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+A ++F M++ G++P+ SY VL+ GLCK + A F + M G
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 305 TFVDLVDGFVKEQGVAEA 322
T+ ++DG K + EA
Sbjct: 445 TYTGMIDGLCKNGFLDEA 462
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+++ + +M + G+ P + + +++GLC+ G ++ A + M P V +A+
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V K KAD+A + R M + P S+T L+ CK + +A E V M G
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN----EKAVKGFLDMKKPFS 352
++ ++ L+ G + +A A + GF+ N + ++G L + FS
Sbjct: 1036 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFS 1092
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +F +M + G P ++L GLCK G ++EA K + + V+Y ++
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS- 300
K+ A +F +M I P++++YT L+ GLC+ + A F E G+
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 301 PNMTTFVDLVDGFVK 315
PN + VDG K
Sbjct: 722 PNKVMYTCFVDGMFK 736
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 3/165 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ MK G+ + ++ LC+ + + L MR++ P V Y ++
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G++ K A ++ +M S G+SPN ++ L+ G ++A + M G +P
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ ++ L+DG K A+G + G V G +D
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++ LCK G V EA + M G +P V + ++ GY + + A +F +M
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 612
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G P F+Y L++GLCK L++A +F + + + + L+ K +A+A
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Query: 323 KGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSVWEAIFGKKA 364
++++ + + + +V +F K+A
Sbjct: 673 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA 714
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 185 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAVV 240
A +F +M + ++P++ +++ GLC+ G A+ +G + P V+YT V
Sbjct: 672 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 731
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G KA + +M + G +P+ + ++ G + +++ + EM
Sbjct: 732 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 791
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
PN+TT+ L+ G+ K + V+ + R++I G +
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 826
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 80/143 (55%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+LD L K V+E L + G + + G +P +V YT +V+G ++ + RI M+ +
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G PN + YT+++ GLC+ R+++A + M ++G SPN T+ +V G+V + A
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 323 KGAIRTLIEKGFVVNEKAVKGFL 345
+R ++E+G+ +N++ L
Sbjct: 671 LETVRAMVERGYELNDRIYSSLL 693
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A+ + +KM + + P+ + A+++G CKDG V A +L +M ++ P + + +
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+EG + K A + ++M NG+SP+ SY VL+ GLC+ + A++ M
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
P+ TF +++ F K+ A + ++ KG ++E +D
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ K+ + GL+P+ V ++DGL + G + + ++ LM+ G +P + YT ++ G
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ + ++A+++ MQ +G+SPN +YTV+V+G +L A E M+E G+ N
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDR 687
Query: 305 TFVDLVDGFVKEQ 317
+ L+ GFV Q
Sbjct: 688 IYSSLLQGFVLSQ 700
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 5/153 (3%)
Query: 184 DADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
DA ++F M KE PN+V+ ++ GLC+ G ++EA L M EKG P YT +
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ D A +F +M G PN +YTVL+ GLC+ ++++A C +M++
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
P++ T+ L++G+ K+ V A + T++EK
Sbjct: 368 FPSVITYNALINGYCKDGRVVPA-FELLTVMEK 399
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A + +M E G P+ ++ LC GL+ +A LF M +G P + YT +
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G + K ++A + RKM + I P+ +Y L+ G CK R+ AFE M +
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN+ TF +L++G + +A ++ +++ G
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 180 AMPEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
+ + A +F +M G PN ++DGLC+DG ++EA + M + P ++ Y
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
A++ GY K + A + M+ PN ++ L++GLC+ + A ML+
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 297 AGHSPNMTTFVDLVDGFVKE 316
G SP++ ++ L+DG +E
Sbjct: 435 NGLSPDIVSYNVLIDGLCRE 454
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 43/187 (22%)
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P A + K+M + GL P+ V+ ++DGLC++G + A KL M P+ + +TA
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML--- 295
++ + K KAD A M GIS + + T L+ G+CK + +DA F +E L
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL-FILETLVKM 540
Query: 296 ---------------------------------EAGHSPNMTTFVDLVDGFVKEQGVAEA 322
+ G P++ T+ LVDG ++ +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS---GDI 597
Query: 323 KGAIRTL 329
G+ R L
Sbjct: 598 TGSFRIL 604
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 3/166 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ M++ PN +++GLC+ G +A+ L M + G P+IV Y +++
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G + + A ++ M I P+ ++T ++ CK + A F ML G S
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
+ T L+DG K +A + TL++ + ++ LDM
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 39/182 (21%)
Query: 189 FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
+++M+ G + + +++ LCK+G + A + + G + + I T+++ G+ +
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 246 AHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAF---------------- 288
DA ++F M +PN+ SY++L+ GLC+ RL++AF
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 289 EFCV-------------------EMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
+ V EM+ G PN+ T+ L+DG ++ + EA G R +
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 330 IE 331
++
Sbjct: 363 VK 364
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 7/182 (3%)
Query: 176 SNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPE 232
S + + DA E+F +M+ G+ +AV +++ GLC G +A +L M + +P
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 233 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 292
++ +TAV++ + K K +A +++ +M + P+ F+Y L+ GLC R+ +A +
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 293 EMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV----VNEKAVKGFLDMK 348
M+ G P++ T+ L++GF K + V E R + ++G V ++G+
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 349 KP 350
+P
Sbjct: 364 RP 365
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM + G P+ V ++++G C+ V +A+ L M E G P++VIY +++
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K +DA +F +M+ +G+ +A +Y LV GLC R DA +M+ P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
N+ TF ++D FVKE +EA
Sbjct: 243 NVITFTAVIDVFVKEGKFSEA 263
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 35/186 (18%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +++++M + P+ ++++GLC G V EA ++ LM KG +P++V Y ++
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 241 EGYTKAHKADDAKRIFRKMQSNGI--------------------------------SPNA 268
G+ K+ + D+ ++FR+M G+ PN
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNI 381
Query: 269 FSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRT 328
+Y++L+ GLC R++ A M ++ ++TT+ ++ G K V +A R+
Sbjct: 382 RTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRS 441
Query: 329 LIEKGF 334
L KG
Sbjct: 442 LSCKGL 447
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 63/121 (52%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
++E + LF M + +P IV ++ V+ K+ D +F M+ GI + +SY +
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ LC+CSR A +M++ G+ P++ T L++GF + V +A + + E G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 334 F 334
F
Sbjct: 170 F 170
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 85/188 (45%), Gaps = 35/188 (18%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++ M G +P+ V +++G CK V E KLF M ++G + + + Y +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 240 VEGYTKAHKADDAKRIFRKM--------------------------------QSNGISPN 267
++GY +A + D A+ IF +M Q + I +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 268 AFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIR 327
+Y +++ G+CK ++DA++ + G P++ ++ ++ GF +++ ++ R
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Query: 328 TLIEKGFV 335
+ E G +
Sbjct: 476 KMQEDGLL 483
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
Q P+ A EIF +M I +L GLC + V++AL LF M++ +I Y
Sbjct: 361 QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK 280
V+ G K +DA +FR + G+ P+ SYT ++ G C+
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Query: 167 LSEEAKSANSNQPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGL 223
LS+ AKS N + +F M+ G+ + + +++ LC+ AL + G
Sbjct: 76 LSKIAKSKNYDLVI------SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
M + G P++V ++++ G+ + ++ DA + KM+ G P+ Y ++ G CK
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKG 343
+ DA E M G + T+ LV G ++A +R ++ + V N
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 344 FLDM 347
+D+
Sbjct: 250 VIDV 253
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 183 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A +F+ M+++ + I ++ G+CK G V++A LF + KG P++V YT +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISP 266
+ G+ + + D + ++RKMQ +G+ P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ ++F KM ++ +P+ V +L + K + LF M G ++ Y V
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + + A + KM G P+ + + L+ G C+ +R+ DA + +M E G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
P++ + ++DG K V +A
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDA 193
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIP-EIVIYTAVVEGYTKAHKADDAKRIFRKMQS 261
A++ LCK+G + EA L M KG P ++V YTAVV G+ + + D AK++ + M +
Sbjct: 423 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 482
Query: 262 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
+G PN SYT L+ G+C+ + +A E E SPN T+ ++ G +E ++E
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 322 AKGAIRTLIEKGF 334
A +R ++ KGF
Sbjct: 543 ACDVVREMVLKGF 555
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLM-REKGTIPEIVIYTA 238
E+A E+ + M G +P+ V+ ++ LCK+ + E L M +E G +P+ V Y
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ TK AD+A + Q G + Y+ +V LCK R+ +A + EML G
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 299 HS-PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
H P++ T+ +V+GF + V +AK ++ + G N + L+
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 210 KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 269
+ G +++ALK+ LM+ G P ++I ++ + +A++ + A R +MQ GI PN
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 270 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
+Y +++G C R+++A E +M G P+ ++ ++ KE+ + E + ++ +
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 330 I-EKGFVVNEKAVKGFLDM 347
E G V ++ + M
Sbjct: 374 AKEHGLVPDQVTYNTLIHM 392
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA ++ M+ G+ PN + +D + +++AL+ M+ G +P +V Y ++
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGH 299
GY H+ ++A + M S G P+ SY ++ LCK R+ + + +M E G
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
P+ T+ L+ K EA ++ EKGF +++
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK 418
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Query: 184 DADEIFKKMKETGLIPNAV----AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+A ++ +M G P V A+++G C+ G V +A KL +M G P V YTA+
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G + K+ +A+ + + + SPN+ +Y+V++ GL + +L +A + EM+ G
Sbjct: 496 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P L+ ++ EA+ + + KG +N
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 593
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A ++ + M G PN V A+L+G+C+ G EA ++ + E P + Y+ +
Sbjct: 471 DKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVI 530
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G + K +A + R+M G P +L+Q LC+ R +A +F E L G
Sbjct: 531 MHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGC 590
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA 340
+ N+ F ++ GF + E A+ ++++ +++N+ A
Sbjct: 591 AINVVNFTTVIHGFCQND---ELDAAL-SVLDDMYLINKHA 627
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A ++ ++M G P V +L LC+DG EA K KG +V +T V+
Sbjct: 542 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI 601
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + + D A + M + F+YT LV L K R+ +A E +ML G
Sbjct: 602 HGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGID 661
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
P T+ ++ + + V + + +I +
Sbjct: 662 PTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+ML+ L K L Q + ++ LM+ +G ++ V+ Y++A + DA ++ MQ
Sbjct: 212 SMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRA 271
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G+ PN + + +RL+ A F M G PN+ T+ ++ G+ V EA
Sbjct: 272 GVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA 331
Query: 323 KGAIRTLIEKGFV---VNEKAVKGFL 345
+ + KG + V+ + G+L
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYL 357
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++D L K G + EA +L M KG P V Y V+ Y + K DD I KM S
Sbjct: 634 TLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKE 316
Y +++ LC +L++A ++L + T L++G++K+
Sbjct: 694 QKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKK 745
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M + G P+ V A+++GLCK G AL L M +VIY+ V+
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ K DDA +F +M++ G+ PN +Y+ L+ LC R DA +M+E +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ TF L+D FVK+ + +A+ +I++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +F +M+ G+ PN + +++ LC G +A +L M E+ P +V ++A+
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + K K A++++ +M I PN F+Y+ L+ G C RL +A + M+
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
PN+ T+ L++GF K + V + R + ++G V N
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN 427
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A ++ + M +PN V +++G CK V + ++LF M ++G + V YT ++
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ +A D+A+ +F++M S G+ PN +Y +L+ GLCK +L A + +
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 301 PNMTTFVDLVDGFVK 315
P++ T+ +++G K
Sbjct: 496 PDIYTYNIMIEGMCK 510
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A++++++M + + PN ++++G C + EA ++ LM K +P +V Y ++
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEAG 298
G+ KA + D +FR+M G+ N +YT L+ G + C Q F+ +M+ G
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK---QMVSVG 458
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEA 322
PN+ T+ L+DG K +A+A
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKA 482
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M E + PN V A++D K G + +A KL+ M ++ P I Y++++
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + +AK++ M PN +Y L+ G CK R+ E EM + G
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N T+ L+ GF + + A+ + ++ G
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 7/172 (4%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM+ + N V ++D LCK +AL LF M KG P ++ Y++++
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ DA R+ M I+PN +++ L+ K +L A + EM++ P
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK----GFVVNEKAVKGFLDMKK 349
N+ T+ L++GF + EAK + +I K V + GF K+
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 66/121 (54%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+ +A+ LFG+M + P I+ ++ ++ K +K D KM+ GIS N ++Y +
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L+ C+CSRL A +M++ G+ P++ T L++GF +++A + ++E G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 334 F 334
+
Sbjct: 179 Y 179
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 190 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
+KM+ G+ N +++ C+ + AL L G M + G P+IV +++ G+
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
++ DA + +M G P+ ++T L+ GL ++ +A M++ G P++ T+
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 307 VDLVDGFVK 315
+V+G K
Sbjct: 222 GAVVNGLCK 230
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+ +A F +M++ G +P+ +A ++ L + EA F ++++ P++++YT
Sbjct: 201 LASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE-PDVIVYT 259
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+V G+ +A + +A+++F++M+ GI PN ++Y++++ LC+C ++ A + +ML++
Sbjct: 260 NLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS 319
Query: 298 GHSPNMTTFVDLVDGFVK 315
G +PN TF +L+ VK
Sbjct: 320 GCAPNAITFNNLMRVHVK 337
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 162 VAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEAL 218
+ SNLS + +++ +A F +K+ P+ + ++ G C+ G + EA
Sbjct: 226 IVISNLSRKRRAS---------EAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAE 275
Query: 219 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 278
K+F M+ G P + Y+ V++ + + A +F M +G +PNA ++ L++
Sbjct: 276 KVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVH 335
Query: 279 CKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
K R + + +M + G P+ T+ L++ +++ + A + T+I+K VN
Sbjct: 336 VKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVN 394
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F M ++G PNA+ ++ K G ++ L+++ M++ G P+ + Y ++E
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ + ++A ++ M NA ++ + + + K + A +M+EA P
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP 428
Query: 302 NMTTFVDLVDGFV 314
N T+ L+ FV
Sbjct: 429 NTVTYNILMRMFV 441
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M G P+ V +++GLCK G + AL L M + P +VIY ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ +DA +F +M + GI PN +Y L++ LC R DA +M+E +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ TF L+D FVKE + EA+ +I++
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M E + PN V A++D K+G + EA KL+ M ++ P+I Y++++
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + D+AK +F M S PN +Y L++G CK R+ + E EM + G
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
N T+ L+ GF + + A+ + ++ G +
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA +F +M G+ PN V +++ LC G +A +L M E+ P +V ++A++
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ + K K +A++++ +M I P+ F+Y+ L+ G C RL +A M+
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
PN+ T+ L+ GF K + V E R + ++G V N
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +F+ M PN V ++ G CK V E ++LF M ++G + V YT +
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ +A + D+A+ +F++M S+G+ P+ +Y++L+ GLC +++ A + +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P++ T+ +++G K V + +L KG
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +FK+M G++P+ + +LDGLC +G V+ AL +F ++ P+I Y +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+EG KA K +D +F + G+ PN +YT ++ G C+ ++A EM E G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
P+ T+ L+ +++ A + IR + FV
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 603
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KKM++ + P V ++D LC V +AL LF M KG P +V Y +++
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ DA R+ M I+PN +++ L+ K +L +A + EM++ P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK----GFVVNEKAVKGFLDMKK 349
++ T+ L++GF + EAK +I K V +KGF K+
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A++++ +M + + P+ ++++G C + EA +F LM K P +V Y ++
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 297
+G+ KA + D+ +FR+M G+ N +YT L+ G + C Q F+ +M+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK---QMVSD 460
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEA 322
G P++ T+ L+DG V A
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETA 485
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 67/121 (55%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+ +A+ LFG M + P IV ++ ++ K +K D + +MQ+ GIS N ++Y++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L+ C+ S+L A +M++ G+ P++ T L++GF +++A + ++E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 334 F 334
+
Sbjct: 182 Y 182
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM + G P+ V ++L+G C + +A+ L G M E G P+ + ++
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G + ++A +A + +M G P+ +Y ++V GLCK + A +M + P
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ + ++D + V +A + KG
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
Query: 190 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
++M+ G+ N +++ C+ + AL + M + G P+IV +++ G+
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
++ DA + +M G P++F++ L+ GL + +R +A M+ G P++ T+
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 307 VDLVDGFVKEQGVAEAKGAIRTL----IEKGFVVNEKAVKGFLDMK 348
+V+G K + A ++ + IE G V+ + + K
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A +++KM E G PN V ++DGLC++G EA ++ M G +P Y+++
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ K ++A +++++M G S N F Y+VL+ GLC R+++A +ML G
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIR 327
P+ + ++ G G+ A++
Sbjct: 499 KPDTVAYSSIIKGLC---GIGSMDAALK 523
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 10/219 (4%)
Query: 128 RNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMP----- 182
R++ N V+N + + L L F + NS+ N+S S N A+
Sbjct: 146 RSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN--MNMNISPNGLSFNLVIKALCKLRFV 203
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A E+F+ M E +P+ ++DGLCK+ + EA+ L M+ +G P VIY +
Sbjct: 204 DRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVL 263
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K ++ M G PN +Y L+ GLC +L A M+ +
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
PN T+ L++G VK++ +A + ++ E+G+ +N+
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 184 DADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M+E G N ++ GL K+G +EA+ L+ M EKG P IV+Y+ +V
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G + K ++AK I +M ++G PNA++Y+ L++G K ++A + EM + G S
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGF 344
N + L+DG V EA ++ G V +KG
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
D +F K G +PN V ++ GLC G + +A+ L M IP V Y ++
Sbjct: 280 VDNMFLK----GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN 335
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K +A DA R+ M+ G N Y+VL+ GL K + ++A +M E G P
Sbjct: 336 GLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 395
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN----EKAVKGFL 345
N+ + LVDG +E EAK + +I G + N +KGF
Sbjct: 396 NIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 85/158 (53%), Gaps = 6/158 (3%)
Query: 182 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P +A EI +M +G +PNA +++ G K GL +EA++++ M + G Y+
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML--- 295
+++G + +A ++ KM + GI P+ +Y+ +++GLC + A + EML
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 296 EAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
E P++ T+ L+DG ++ ++ A + +++++G
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A + ++M + IPN V +++GL K +A++L M E+G IY+ +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K KA++A ++RKM G PN Y+VLV GLC+ + +A E M+ +G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
PN T+ L+ GF K EA + + + G N+ +D
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 76/175 (43%), Gaps = 7/175 (4%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + +M+ G P+ V ++DGLCK G + KL M KG +P V Y +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K D A + +M S+ PN +Y L+ GL K R DA M E G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFLDMKKP 350
N + L+ G KE EA R + EKG VV V G KP
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ + E+A +++K+M +TG N ++DGLC G V+EA+ ++ M G P+ V
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSN---GISPNAFSYTVLVQGLCKCSRLQDAFEFC 291
Y+++++G D A +++ +M P+ +Y +L+ GLC + A +
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
Query: 292 VEMLEAGHSPNMTT 305
ML+ G P++ T
Sbjct: 564 NSMLDRGCDPDVIT 577
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A IF+++ E GL+P+ V M+DG C G +A + FG + + G P + T ++
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
++ DA+ +FR M++ G+ + +Y L+ G K +L FE EM AG SP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFS 352
++ T+ L+ V + EA I LI +GFV + A F D+ FS
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA---FTDVIGGFS 559
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 156 AGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLD---GLCKDG 212
AG S +VA N+ + ++A+EI ++ G +P+ +A D G K G
Sbjct: 507 AGISPDVATYNILIHSMVVR----GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG 562
Query: 213 LVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT 272
QEA L+ M + P++V +A++ GY KA + + A +F K+ G+ P+ Y
Sbjct: 563 DFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYN 622
Query: 273 VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF 313
L+ G C ++ A E M++ G PN +T LV G
Sbjct: 623 TLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 178 QPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ ++A + K+K G+ + +++DG CK G +EA+KL R + P I
Sbjct: 318 KAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIF 374
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+Y++ + A IF+++ G+ P+ YT ++ G C R AF++ +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
L++G+ P++TT L+ + +++A+ R + +G
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+ +M+ G+ P+ ++ + G + EA ++ + +G +P + +T V+ G+
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+K +A ++ M + P+ + + L+ G CK R++ A ++L+AG P++
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
+ L+ G+ + +A I ++++G + NE
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 7/168 (4%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA+ +F+ MK GL + V ++ G K + + +L MR G P++ Y ++
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
D+A I ++ G P+ ++T ++ G K Q+AF M +
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGF 344
P++ T L+ G+ K Q + +A L++ G V+ + G+
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A IF+++ E GL+P+ V M+DG C G +A + FG + + G P + T ++
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
++ DA+ +FR M++ G+ + +Y L+ G K +L FE EM AG SP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFS 352
++ T+ L+ V + EA I LI +GFV + A F D+ FS
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA---FTDVIGGFS 559
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 156 AGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLD---GLCKDG 212
AG S +VA N+ + ++A+EI ++ G +P+ +A D G K G
Sbjct: 507 AGISPDVATYNILIHSMVVR----GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG 562
Query: 213 LVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT 272
QEA L+ M + P++V +A++ GY KA + + A +F K+ G+ P+ Y
Sbjct: 563 DFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYN 622
Query: 273 VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF 313
L+ G C ++ A E M++ G PN +T LV G
Sbjct: 623 TLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 178 QPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ ++A + K+K G+ + +++DG CK G +EA+KL R + P I
Sbjct: 318 KAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIF 374
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+Y++ + A IF+++ G+ P+ YT ++ G C R AF++ +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
L++G+ P++TT L+ + +++A+ R + +G
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+ +M+ G+ P+ ++ + G + EA ++ + +G +P + +T V+ G+
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+K +A ++ M + P+ + + L+ G CK R++ A ++L+AG P++
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
+ L+ G+ + +A I ++++G + NE
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 7/168 (4%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA+ +F+ MK GL + V ++ G K + + +L MR G P++ Y ++
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
D+A I ++ G P+ ++T ++ G K Q+AF M +
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGF 344
P++ T L+ G+ K Q + +A L++ G V+ + G+
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++F+ M+E PN ++L G C++G + EA ++ M+E G P+IV++T +
Sbjct: 219 KEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 277
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS-RLQDAFEFCVEMLEAG 298
+ GY A K DA + M+ G PN YTVL+Q LC+ R+ +A VEM G
Sbjct: 278 LSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG 337
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
++ T+ L+ GF K + + + + +KG +
Sbjct: 338 CEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVM 374
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +F +M+ G I A++ G CK G++ + + MR+KG +P V Y +
Sbjct: 324 DEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQI 383
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + K + ++ + KM+ G P+ Y V+++ CK +++A EM G
Sbjct: 384 MVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL 443
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
SP + TFV +++GF + + EA + ++ +G
Sbjct: 444 SPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A E+ +MKE GL P+ V +L G G + +A L MR++G P + YT ++
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 241 EGYTKAHK-ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + K D+A R+F +M+ G + +YT L+ G CK + + +M + G
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P+ T++ ++ K++ E I + +G
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTAV 239
+A + +M G P+ +++GLCK G + AL L M EKG I ++VIYT +
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTI 261
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ +DA +F +M + GI PN +Y L++ LC R DA +M+E
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
+PN+ TF L+D FVKE + EA+ +I++
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +IFKKM G+ P+ + +LDGLCK G +++AL +F +++ P+I Y ++E
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G KA K +D +F + G+ PN YT ++ G C+ ++A EM E G P
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
N T+ L+ +++ A + I+ + GFV + + ++M
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ E+F++M + GL+ N V ++ GL + G A K+F M G P+I+ Y+ +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K K + A +F +Q + + P+ ++Y ++++G+CK +++D ++ + G
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
PN+ + ++ GF ++ EA R + E G + N
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 7/169 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +F+ M PN V ++ G CK V+E ++LF M ++G + V Y +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G +A D A++IF+KM S+G+ P+ +Y++L+ GLCK +L+ A + ++
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGF 344
P++ T+ +++G K V + +L KG ++ + GF
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA +F +M G+ PN V +++ LC G +A +L M E+ P +V ++A++
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ + K K +A++++ +M I P+ F+Y+ L+ G C RL +A M+
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
PN+ T+ L+ GF K + V E R + ++G V N
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M E + PN V A++D K+G + EA KL+ M ++ P+I Y++++
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + D+AK +F M S PN +Y L++G CK R+++ E EM + G
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N T+ L+ G + A+ + ++ G
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A++++ +M + + P+ ++++G C + EA +F LM K P +V Y ++
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 297
+G+ KA + ++ +FR+M G+ N +Y L+QGL + C Q F+ +M+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK---KMVSD 459
Query: 298 GHSPNMTTFVDLVDGFVK 315
G P++ T+ L+DG K
Sbjct: 460 GVPPDIITYSILLDGLCK 477
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KKM++ + + V ++D LC V +AL LF M KG P +V Y +++
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ DA R+ M I+PN +++ L+ K +L +A + EM++ P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK----GFVVNEKAVKGFLDMKK 349
++ T+ L++GF + EAK +I K V +KGF K+
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+ +A+ LFG M + +P IV + ++ K +K D + +MQ+ IS + +SY +
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L+ C+ S+L A +M++ G+ P++ T L++G+ + ++EA L+++
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA----LVDQM 176
Query: 334 FVV 336
FV+
Sbjct: 177 FVM 179
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Query: 199 PNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 255
PN V ++ GL EA+ L M +G P++ Y VV G K D A +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 256 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
+KM+ I + YT ++ LC + DA EM G PN+ T+ L+
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 316 EQGVAEAKGAIRTLIEK 332
++A + +IE+
Sbjct: 303 YGRWSDASRLLSDMIER 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM + G P+ V ++L+G C + EA+ L M P V + ++
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +KA +A + +M + G P+ F+Y +V GLCK + A +M +
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ + ++D + V +A + KG
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+++ C+ + AL + G M + G P+IV ++++ GY + +A + +M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
PN ++ L+ GL ++ +A M+ G P++ T+ +V+G K + A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 324 GAIRTLIEKG 333
++ + EKG
Sbjct: 241 SLLKKM-EKG 249
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 191 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
KM + G P+ V ++L+G C+ QEA+ L M G +P +VIY V+ G K
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFV 307
++A +F M+ GI +A +Y L+ GL R DA +M++ PN+ F
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 308 DLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
L+D FVKE + EA+ + +I + V N
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A ++K+M ++PN ++++G C G + +A +F LM KG P++V Y ++
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K+ + +D ++F +M G+ +AF+Y L+ G C+ +L A + M++ G S
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P++ T+ L+D + +A
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKA 413
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA +F M G P+ V ++ G CK V++ +KLF M +G + + Y ++
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY +A K + A+++F +M G+SP+ +Y +L+ LC +++ A ++ ++
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ T+ ++ G + + EA R+L KG
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + M G +PN V +++GLCK+ + AL++F M +KG + V Y +
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G + + + DA R+ R M I PN +T L+ K L +A EM+
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFL------DMKK 349
PN+ T+ L++GF + +AK ++ KG V + GF D K
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 350 PFSPSVWEAIFG 361
F ++ + G
Sbjct: 346 LFCEMTYQGLVG 357
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + + M + + PN + A++D K+G + EA L+ M + +P + Y +++
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ DAK +F M S G P+ +Y L+ G CK R++D + EM G
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ T+ L+ G+ + + A+ +++ G
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
+A LF M + IP IV +T V+ K +K D ++ KM++ GIS + +S+T+L+
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
C+CSRL A +M++ G P++ T L++GF + EA + ++ GFV
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 336 VN 337
N
Sbjct: 182 PN 183
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 89/156 (57%), Gaps = 4/156 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+ ++A +F K+KE PN + +L+G C+ + EA +++ M ++G P+IV +
Sbjct: 279 LGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHN 337
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++EG ++ K DA ++F M+S G PN SYT++++ CK S ++ A E+ +M+++
Sbjct: 338 VMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
G P+ + L+ GF ++ + ++ + EKG
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 184 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA ++F MK G PN M+ CK ++ A++ F M + G P+ +YT ++
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K D + ++MQ G P+ +Y L++ + + A +M++
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE 470
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
P++ TF ++ + + + +I+KG
Sbjct: 471 PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC 505
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E F M ++GL P+A ++ G + +L M+EKG P+ Y A+
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + A RI+ KM N I P+ ++ ++++ + EM++ G
Sbjct: 445 IKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGI 504
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P+ ++ L+ G + E EA + +++KG
Sbjct: 505 CPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG 538
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A E++K+M ++ + PN V ++++GLC G + +A K F LM KG P +V Y +
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ K D+ ++F++M G + + F+Y L+ G C+ +L+ A + M+
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Query: 300 SPNMTTFVDLVDGF 313
+P++ T L+ G
Sbjct: 383 TPDIITHCILLHGL 396
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 136 VVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKET 195
+VN++GD+F + K+G V N + N A E+ +M++
Sbjct: 153 LVNRIGDAFSLVILM---VKSGYEPNVVVYNTLIDGLCKNGELNI----ALELLNEMEKK 205
Query: 196 GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDA 252
GL + V +L GLC G +A ++ M ++ P++V +TA+++ + K D+A
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 253 KRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDG 312
+ ++++M + + PN +Y ++ GLC RL DA + M G PN+ T+ L+ G
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 313 FVKEQGVAEAKGAIRTLIEKGF 334
F K + V E + + +GF
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGF 347
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 7/172 (4%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M ++G PN V ++DGLCK+G + AL+L M +KG ++V Y ++
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G + + DA R+ R M I+P+ ++T L+ K L +A E EM+++
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFLDMK 348
PN T+ +++G + +AK + KG V + GF +
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM + G P+ V ++L G C + +A L LM + G P +V+Y +++
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K + + A + +M+ G+ + +Y L+ GLC R DA +M++ +P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF---------VVNEKAVKGFL-DMKKPF 351
++ TF L+D FVK+ + EA+ + +I+ ++N + G L D KK F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%)
Query: 215 QEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVL 274
++A LF M +P IV +T ++ + + +KM+ GIS + +S+T+L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 275 VQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ C+CSRL A +M++ G+ P++ TF L+ GF + +A + +++ G+
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 335 VVNEKAVKGFLD 346
N +D
Sbjct: 173 EPNVVVYNTLID 184
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 38/195 (19%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + F M G PN V ++ G CK +V E +KLF M +G +I Y ++
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFS------------------------------ 270
GY + K A IF M S ++P+ +
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 271 -----YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGA 325
Y +++ GLCK +++ A+E + G P+ T+ ++ G K EA
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 326 IRTLIEKGFVVNEKA 340
IR + E+G + A
Sbjct: 479 IRRMKEEGIICQMNA 493
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + + M + + P+ V A++D K G + EA +L+ M + P V Y +++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G + DAK+ F M S G PN +Y L+ G CK + + + M G +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 301 PNMTTFVDLVDGFVK 315
++ T+ L+ G+ +
Sbjct: 349 ADIFTYNTLIHGYCQ 363
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 190 KKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
+KM+ G+ + + ++ C+ + AL + G M + G P IV + +++ G+
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
++ DA + M +G PN Y L+ GLCK L A E EM + G ++ T+
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 307 VDLVDGFVKEQGVAEAKGAIRTLIEK 332
L+ G ++A +R ++++
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKR 240
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Query: 183 EDADEIFKKMKETGLIP-NAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +++KM + +P NA+ ++ LCK+G V EA KLF EKG+IP ++ Y +
Sbjct: 348 DEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTL 406
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G + + +A R++ M PNAF+Y VL++GL K +++ EMLE G
Sbjct: 407 IAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGC 466
Query: 300 SPNMTTFVDLVDGFVK 315
PN TTF+ L +G K
Sbjct: 467 FPNKTTFLILFEGLQK 482
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 188 IFKKMKET-GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+FK KE+ G+ PN ++ LCK ++ A K+ + G +P +V YT ++ GY
Sbjct: 177 MFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGY 236
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ AKR+ +M G P+A +YTVL+ G CK R +A +M + PN
Sbjct: 237 VARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
T+ ++ KE+ EA+ ++E+ F+
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSFM 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++ ++ GL+PN V +L G G ++ A ++ M ++G P+ YT +
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++GY K + +A + M+ N I PN +Y V+++ LCK + +A EMLE
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
P+ + ++D ++ V EA G R +++
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLK 359
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + M++ + PN V M+ LCK+ EA +F M E+ +P+ + V+
Sbjct: 279 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVI 338
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ + HK D+A ++RKM N P+ + L+ LCK R+ +A + E E G
Sbjct: 339 DALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSI 397
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P++ T+ L+ G ++ + EA
Sbjct: 398 PSLLTYNTLIAGMCEKGELTEA 419
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 15/193 (7%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A + ++M + G P+A ++DG CK G EA + M + P V Y +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ K K+ +A+ +F +M P++ ++ LC+ ++ +A +ML+
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA--------KGAIRTLIEKGFVVNEKAVKGFLDMKKPF 351
P+ L+ KE V EA KG+I +L+ ++ KG L
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTE---- 418
Query: 352 SPSVWEAIFGKKA 364
+ +W+ ++ +K
Sbjct: 419 AGRLWDDMYERKC 431
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + + +M + + PN V ++++GLC GL+ EA K+ ++ KG P V Y ++
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY KA + DD +I M +G+ + F+Y L QG C+ + A + M+ G
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P+M TF L+DG + +A
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKA 413
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%)
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
+AL LF M E +P IV ++ ++ K +K + +FR ++ GIS + +S+T L+
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
C+C+RL A +M++ G P++ TF LV+GF EA + ++ G+
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + ++ G PN V ++D LC+ G V AL + M++ G P++V Y +++
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ + RI M GISP+ +++ L+ K +L +A + EM++ +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGFLDMKK 349
PN+ T+ L++G + EAK + L+ KGF V + G+ K+
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKR 339
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 180 AMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
+ ++A ++ + G PNAV +++G CK V + +K+ +M G + Y
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
+ +GY +A K A+++ +M S G+ P+ +++ +L+ GLC ++ A ++ +
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ + T+ ++ G K V +A +L KG
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 187 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
I M G+ P+ + A++D K+G + EA K + M ++ P IV Y +++ G
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
D+AK++ + S G PNA +Y L+ G CK R+ D + M G +
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
T+ L G+ + + A+ + ++ G
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ K MK+ G+ P+ V +++ L G + ++ M G P+++ ++A+++
Sbjct: 203 ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
Y K + +AK+ + +M ++PN +Y L+ GLC L +A + ++ G P
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322
Query: 302 NMTTFVDLVDGFVKEQGV 319
N T+ L++G+ K + V
Sbjct: 323 NAVTYNTLINGYCKAKRV 340
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 191 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
KM + G P+ V ++++G C EA+ L + G P +VIY +++ +
Sbjct: 139 KMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG 198
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFV 307
+ + A + + M+ GI P+ +Y L+ L + +M+ G SP++ TF
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 308 DLVDGFVKEQGVAEAKGAIRTLIEKGF---------VVNEKAVKGFLDMKK 349
L+D + KE + EAK +I++ ++N + G LD K
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+++ +M G+ P+ +LDGLC G + +AL +++ T+ I+ Y +++
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIK 437
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 278
G KA K +DA +F + G+SP+ +Y ++ GL
Sbjct: 438 GLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA +F M E+ +P+ V +L + K + + LF + G ++ +T ++
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ + + + A KM G P+ ++ LV G C +R +A +++ G+
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN+ + ++D ++ V A ++ + + G
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +IF +K+ GL+P++V M+ K G + EA+KL M E G P++++ +++
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
KA + D+A ++F +M+ + P +Y L+ GL K ++Q+A E M++ G
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
PN TF L D K V A + +++ G V
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Query: 155 KAGNSSEVAASNLSEEAKSANSNQPAMPEDA-DEIFKKMKETGLIPNAVA---MLDGLCK 210
K ++ E A+ ++ + + +DA D + M + P A ++DGL K
Sbjct: 844 KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK 903
Query: 211 DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFS 270
G + EA +LF M + G P IY ++ G+ KA +AD A +F++M G+ P+ +
Sbjct: 904 SGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 963
Query: 271 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
Y+VLV LC R+ + + E+ E+G +P++ + +++G K + EA
Sbjct: 964 YSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Query: 185 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +FK+M + G+ P+ ++D LC G V E L F ++E G P++V Y ++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 242 GYTKAHKADDAKRIFRKMQ-SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G K+H+ ++A +F +M+ S GI+P+ ++Y L+ L +++A + E+ AG
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN+ TF L+ G+ A +T++ GF
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E F+KMK G+ PN VA L L K G +EA ++F +++ G +P+ V Y +++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
Y+K + D+A ++ +M NG P+ L+ L K R+ +A++ + M E P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ T+ L+ G K + EA +++KG
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 188 IFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ K+M+ GL PN + L + G + EA ++ M ++G P++V YT +++
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
A K D AK +F KM++ P+ +Y L+ L +F EM + GH P++
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
TF LVD K EA + + ++G + N
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+ + +M++ G +P+ V ++D LCK G EA +MR++G +P + Y ++ G
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ H+ DDA +F M+S G+ P A++Y V + K A E +M G +PN+
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 304 T 304
Sbjct: 469 V 469
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
M E A ++F ++K TG IP+ +LD K G + E +L+ M + +
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
V+ G KA DDA ++ + S+ SP A +Y L+ GL K RL +A + ML+
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
G PN + L++GF K A + ++++G
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++F +MKE L P V +L GL K+G +QEA++LF M +KG P + + +
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ K + A ++ KM G P+ F+Y ++ GL K ++++A F +M + +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY 674
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
P+ T L+ G VK + +A I +
Sbjct: 675 -PDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 189 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMR-EKGTIPEIVIYTAVVEGYT 244
FK++KE+GL P+ V +++GL K ++EAL LF M+ +G P++ Y +++
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
A ++A +I+ ++Q G+ PN F++ L++G + + A+ M+ G SPN
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Query: 305 TFVDL 309
T+ L
Sbjct: 1104 TYEQL 1108
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++ +M E G P+ + ++++ L K V EA K+F M+E P +V Y +
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K K +A +F M G PN ++ L LCK + A + +M++ G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
P++ T+ ++ G VK V EA
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEA 662
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA E+F M+ G+ P A + +D K G AL+ F M+ KG P IV A
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ KA + +AK+IF ++ G+ P++ +Y ++++ K + +A + EM+E G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
P++ L++ K V EA
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEA 557
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A EI K+M + G P+ V ++D LC + A ++F M+ P+ V Y ++
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ ++ D K+ + +M+ +G P+ ++T+LV LCK +AF+ M + G
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
PN+ T+ L+ G ++ + +A
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDA 417
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 189 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
+KM+E G + NA + ++ L K EA++++ M +G P + Y++++ G K
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
D + ++M++ G+ PN +++T+ ++ L + ++ +A+E M + G P++ T
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 306 FVDLVDGFVKEQGVAEAK 323
+ L+D + + AK
Sbjct: 296 YTVLIDALCTARKLDCAK 313
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 184 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A E++++M G P+ +++ GL K + + L M G P + +T +
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+A K ++A I ++M G P+ +YTVL+ LC +L A E +M H
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 301 PNMTTFVDLVDGF 313
P+ T++ L+D F
Sbjct: 326 PDRVTYITLLDRF 338
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+F+KMK P+ V +LD + + + + M + G +P++V +T +V+
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
KA +A M+ GI PN +Y L+ GL + RL DA E M G P
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
T++ +D + K A + KG N A L
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLF-GLMREKGTIPEIVIYTAVVEG 242
E++K+M N + ++ GL K G V +AL L+ LM ++ P Y +++G
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
+K+ + +AK++F M G PN Y +L+ G K A M++ G P+
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ T+ LVD V E + L E G
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 88/156 (56%), Gaps = 4/156 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+ ++A +F K+KE PN + +L+G C+ + EA +++ M + G P+IV +
Sbjct: 279 LGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 337
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++EG ++ K DA ++F M+S G PN SYT++++ CK S ++ A E+ +M+++
Sbjct: 338 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
G P+ + L+ GF ++ + ++ + EKG
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Query: 184 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA ++F MK G PN M+ CK ++ A++ F M + G P+ +YT ++
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K D + ++MQ G P+ +Y L++ + + +M++
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 470
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
P++ TF ++ + + + +I+KG
Sbjct: 471 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC 505
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E F M ++GL P+A ++ G + +L M+EKG P+ Y A+
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + RI+ KM N I P+ ++ ++++ + EM++ G
Sbjct: 445 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 504
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P+ ++ L+ G + E EA + +++KG
Sbjct: 505 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 538
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 88/156 (56%), Gaps = 4/156 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+ ++A +F K+KE PN + +L+G C+ + EA +++ M + G P+IV +
Sbjct: 278 LGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 336
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++EG ++ K DA ++F M+S G PN SYT++++ CK S ++ A E+ +M+++
Sbjct: 337 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 396
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
G P+ + L+ GF ++ + ++ + EKG
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 432
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Query: 184 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA ++F MK G PN M+ CK ++ A++ F M + G P+ +YT ++
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K D + ++MQ G P+ +Y L++ + + +M++
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 469
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
P++ TF ++ + + + +I+KG
Sbjct: 470 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC 504
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E F M ++GL P+A ++ G + +L M+EKG P+ Y A+
Sbjct: 384 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 443
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + RI+ KM N I P+ ++ ++++ + EM++ G
Sbjct: 444 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 503
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P+ ++ L+ G + E EA + +++KG
Sbjct: 504 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 537
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E+ +MK +G + V ++D CK G + EA+ M+ G ++V+YT++
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ + D K +F ++ G SP A +Y L++G CK +L++A E M+E G
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ T+ L+DG EA + +IEK
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + ++M+ L+P+ + ++ G C+ +++AL+L M+ G +V + +++
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ KA K D+A ++M+ G+ + YT L++G C C L E+LE G SP
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
T+ L+ GF K + EA +IE+G N G +D
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E++K++ ++ ++ N+ AM+DG CK G++ A L MR P + Y ++
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K D A R+F +MQ + P+ S+ +++ G K ++ A V M AG SP
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ T+ L++ F+K + EA +++ GF
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A K+MK GL + V +++ G C G + LF + E+G P + Y +
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ K + +A IF M G+ PN ++YT L+ GLC + ++A + M+E
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
PN T+ +++ K+ VA+A
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADA 371
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 156 AGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQ 215
+G+S A +NL + + +++ A ++KM ET N V+ L GL + VQ
Sbjct: 67 SGSSLAFAGNNLMAKLVRSRNHELAFS-----FYRKMLETDTFINFVS-LSGLL-ECYVQ 119
Query: 216 E-----ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFS 270
A + LM ++G + + +++G + + A + R+M+ N + P+ FS
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179
Query: 271 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL- 329
Y +++G C+ L+ A E EM +G S ++ T+ L+D F K + EA G ++ +
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 330 ---IEKGFVVNEKAVKGFLD 346
+E VV ++GF D
Sbjct: 240 FMGLEADLVVYTSLIRGFCD 259
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
++A ++ M E PNAV +++ LCKDGLV +A+++ LM+++ T P+ + Y
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 239 VVEGYTKAHKADDAKRIFRKM--QSNGISPNAFSYTVLVQGLCKCSRLQ---DAFEFCVE 293
++ G D+A ++ M S+ P+ SY L+ GLCK +RL D ++ VE
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 294 MLEAG 298
L AG
Sbjct: 453 KLGAG 457
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+F ++ E G P A+ ++ G CK G ++EA ++F M E+G P + YT +++G
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K +A ++ M PNA +Y +++ LCK + DA E M + P+
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIE 331
T+ L+ G + + EA + +++
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLK 415
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ M A + KM+ + L P+ +L LCK+G + +A +LF M+ P++V
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+ +++G KA A+ + M G+SP+ F+Y+ L+ K L +A F +M
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAE-AKGAIRTLIEKGFVVNEKAVKGFLD 346
+++G P+ D V + QG + ++ L++K V++++ +D
Sbjct: 626 VDSGFEPD-AHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMD 677
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 65/136 (47%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
+ N +L GLC++ +A+ L MR +P++ Y V+ G+ + + + A +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQ 317
+M+ +G S + ++ +L+ CK ++ +A F EM G ++ + L+ GF
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 318 GVAEAKGAIRTLIEKG 333
+ K ++E+G
Sbjct: 262 ELDRGKALFDEVLERG 277
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A++ GLCK+ + +AL ++ L+ EK + V ++ KA + A +++++ +
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
I N+ +YT ++ G CK L A +M + P++ + L+ KE + +A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTA 238
++A E+ M + + N V +++GLCK G +A +L ++ EK + Y +
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++G+ K + D A + +M NGISPN +YT L+ GLCK +R+ A E EM G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ + L+DGF K + A L+E+G
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 185 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +++KKM + GL + ++DGL KDG + A +L+ M+ G +P+ +IYT +V
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +K + ++F +M+ N ++PN Y ++ G + L +AF EML+ G P
Sbjct: 768 GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Query: 302 NMTTFVDLVDGFV 314
+ TF LV G V
Sbjct: 828 DGATFDILVSGQV 840
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA--MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
E+A ++F + ETGL V +L LCK G EA +L M +G P +V Y V+
Sbjct: 426 EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ + D A+ +F + G+ PN ++Y++L+ G + Q+A E M +
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
N + +++G K ++A+ + +IE+
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E +KKM+ GL P+ ++ G K +EALKLF E G + + + +
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTI 449
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ K K D+A + KM+S GI PN SY ++ G C+ + A +LE G
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Query: 300 SPNMTTFVDLVDGFVK---EQGVAEAKGAIRTL-IEKGFVVNEKAVKGF 344
PN T+ L+DG + EQ E + + IE VV + + G
Sbjct: 510 KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGL 558
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 189 FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
+++M G+ PN + ++++GLCK+ + +AL++ M+ KG +I Y A+++G+ K
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
+ A +F ++ G++P+ Y L+ G + A + +ML+ G ++ T
Sbjct: 667 RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 306 FVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE-----------------KAVKGFLDMK 348
+ L+DG +K+ + A + G V +E K VK F +MK
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 349 K 349
K
Sbjct: 787 K 787
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+F KM++ G PN+V +++ K+G +++AL+ + M G P + +++G+
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K K ++A ++F + G++ N F ++ LCK + +A E +M G PN+
Sbjct: 421 KGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
++ +++ G +++ + A+ ++EKG N +D
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 67/132 (50%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++DG K+G + A+ + M G P ++ YT+++ G K ++ D A + +M++
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G+ + +Y L+ G CK S ++ A E+LE G +P+ + L+ GF + A
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 323 KGAIRTLIEKGF 334
+ +++ G
Sbjct: 709 LDLYKKMLKDGL 720
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 39/203 (19%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A E+ KM+ G+ PN V+ ++ G C+ + A +F + EKG P Y+ +
Sbjct: 460 DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-- 297
++G + H +A + M S+ I N Y ++ GLCK + A E M+E
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 579
Query: 298 ----------------------------------GHSPNMTTFVDLVDGFVKEQGVAEAK 323
G SPN+ T+ L++G K + +A
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 324 GAIRTLIEKGFVVNEKAVKGFLD 346
+ KG ++ A +D
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALID 662
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A +F ++ E GL P+ +++ G G + AL L+ M + G ++ YT +
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K A ++ +MQ+ G+ P+ YTV+V GL K + + EM +
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
+PN+ + ++ G +E + EA +++KG +
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 185 ADEIFKKMKETGL-IPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
A+ + ++MKE L +P+ +++ K G + +A++L M G +V T+++
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLI 346
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K + A +F KM+ G SPN+ +++VL++ K ++ A EF +M G +
Sbjct: 347 TGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P++ ++ G++K Q EA
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEA 428
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 16/196 (8%)
Query: 181 MPEDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
M +A E FK+ ++ + + V D L K G V+EA +L M+++G +P+++ YT
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYT 427
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+++GY K DA + +M NG+SP+ +Y VLV GL + ++ E M
Sbjct: 428 TLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAE 487
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK------GFV-------VNEKAVKGF 344
G PN T +++G + V EA+ +L +K FV +++KA K F
Sbjct: 488 GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAF 547
Query: 345 LDMKKPFSPSVWEAIF 360
+ ++ P SV+ +F
Sbjct: 548 VRLEYPLRKSVYIKLF 563
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +F M E GLIP+ M+ C+ +Q+A LF M+++G P++V YT ++
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Query: 241 EGYTKA----HKA---------DDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 287
+ Y K H+ A + R+ + GI + YTVL+ CK + L+ A
Sbjct: 669 DRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQA 728
Query: 288 FEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
E M+++G P+M + L+ + ++ + A + L +K
Sbjct: 729 AELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 175 NSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIP 231
N N P +A KM GL N V +L CK + EAL+ F R+
Sbjct: 331 NMNLP----EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFL 386
Query: 232 EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 291
+ V Y + +K + ++A + ++M+ GI P+ +YT L+ G C ++ DA +
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 292 VEMLEAGHSPNMTTFVDLVDGFVK 315
EM+ G SP++ T+ LV G +
Sbjct: 447 DEMIGNGMSPDLITYNVLVSGLAR 470
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+ + +M+E G + +A++D CK+ + EAL M KG VI + +++
Sbjct: 302 AESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQ 361
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
Y K +A F++ + I + Y V L K R+++AFE EM + G P
Sbjct: 362 CYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVP 421
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ + L+DG+ + V +A I +I G
Sbjct: 422 DVINYTTLIDGYCLQGKVVDALDLIDEMIGNG 453
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++ KKM + P M+ CK V+EA LF M E+G IP++ YT +
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK--------CSRL-----QD 286
+ Y + ++ A+ +F M+ GI P+ +YTVL+ K CS +
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRK 692
Query: 287 AFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF---------VVN 337
A E E AG ++ + L+D K + +A +I+ G +++
Sbjct: 693 ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLIS 752
Query: 338 EKAVKGFLDM 347
KG++DM
Sbjct: 753 SYFRKGYIDM 762
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M E + PN V A++D K+G + EA KL M ++ P+ + Y ++
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ ++ D+AK++F+ M S PN +Y L+ G CKC R++D E EM + G
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
N T+ ++ GF + A+ + ++
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + +M + G P+ V +++GLCK G + AL L M +VI+ ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ K + A +F +M++ GI PN +Y L+ LC R DA MLE +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ TF L+D F KE + EA+ +I++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 7/170 (4%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++F +M+ G+ PN V ++++ LC G +A +L M EK P +V + A+
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + K K +A+++ +M I P+ +Y +L+ G C +RL +A + M+
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN----EKAVKGFL 345
PN+ T+ L++GF K + V + R + ++G V N ++GF
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++FK M +PN +++G CK V++ ++LF M ++G + V YT +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ +A D A+ +F++M SN + + +Y++L+ GLC +L A + ++
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
N+ + +++G K V EA
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEA 522
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 7/172 (4%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM+ + N V ++D LCK V+ A+ LF M KG P +V Y +++
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ DA R+ M I+PN ++ L+ K +L +A + EM++ P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA----VKGFLDMKK 349
+ T+ L++GF + EAK + ++ K + N + + GF K+
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
ED E+F++M + GL+ N V ++ G + G A +F M +I+ Y+ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE-FCVEMLEAG 298
+ G K D A IF+ +Q + + N F Y +++G+CK ++ +A++ FC
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC----SLS 530
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P++ T+ ++ G ++ + EA R + E G
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 66/121 (54%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
V +A+ LFG M + P IV + ++ K +K + + +MQ+ GIS + ++Y++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ C+ S+L A +M++ G+ P++ T L++G+ + +++A + ++E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 334 F 334
+
Sbjct: 184 Y 184
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 178 QPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q + A +FK+M + I +L GLC G + AL +F +++ I
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
IY ++EG KA K +A +F + I P+ +Y ++ GLC LQ+A + +M
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
E G PN T+ L+ +++ A + I+ + GFV
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFV 602
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+++ ++M + + P+ + +++G C + EA ++F M K +P I Y ++
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEFCVEMLEA 297
G+ K + +D +FR+M G+ N +YT ++QG + C Q F+ +M+
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK---QMVSN 462
Query: 298 GHSPNMTTFVDLVDGF 313
++ T+ L+ G
Sbjct: 463 RVPTDIMTYSILLHGL 478
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM + G P+ V ++L+G C + +A+ L M E G P+ +T ++
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +KA +A + +M G P+ +Y +V GLCK + A +M A
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
N+ F ++D K + V A + KG
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 152 FDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGL 208
F + +G+ E+ + LS+ K +DA ++F M ++ P+ V +L +
Sbjct: 43 FASASGDYREILRNRLSDIIK---------VDDAVDLFGDMVKSRPFPSIVEFNKLLSAV 93
Query: 209 CKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNA 268
K + + L M+ G ++ Y+ + + + + A + KM G P+
Sbjct: 94 AKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDI 153
Query: 269 FSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRT 328
+ + L+ G C R+ DA +M+E G+ P+ TF L+ G +EA +
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 329 LIEKG 333
++++G
Sbjct: 214 MVQRG 218
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%)
Query: 205 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
++ C+ + AL + M + G P+IV ++++ GY + + DA + +M G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
P+ F++T L+ GL ++ +A +M++ G P++ T+ +V+G K
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
IFK ++++ + N M++G+CK G V EA LF + K P++V Y ++ G
Sbjct: 490 IFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLC 546
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG-LCKCSRLQDAFEFCVEMLEAGHSPNM 303
+A +FRKM+ +G PN+ +Y L++ L C R A E EM +G +
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA-ELIKEMRSSGFVGDA 605
Query: 304 TTF 306
+T
Sbjct: 606 STI 608
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + KM GL + V +++G+CK G + AL L M E P++VIY+A++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ K DA+ +F +M GI+PN F+Y ++ G C R DA +M+E +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 301 PNMTTFVDLVDGFVKEQGVAEAK 323
P++ TF L+ VKE + EA+
Sbjct: 364 PDVLTFNALISASVKEGKLFEAE 386
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +F +M E GL P + +++GLC +G V EA L M KG ++V Y +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G K A + KM+ I P+ Y+ ++ LCK DA EMLE G +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ T+ ++DGF ++A+ +R +IE+
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM+ET + P+ V A++D LCKDG +A LF M EKG P + Y +++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ + DA+R+ R M I+P+ ++ L+ K +L +A + C EML P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 302 NMTTFVDLVDGFVKEQGVAEAK 323
+ T+ ++ GF K +AK
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAK 421
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F++M G+ P+ + +L G C++ ++EAL+LF +++ + V Y ++
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K K D+A +F + +G+ P+ +Y V++ G C S + DA +M + GH P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ +T+ L+ G +K + ++ I + GF
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+++ +M + P+ V +M+ G CK +A +F LM P++V + ++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTII 439
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ Y +A + D+ ++ R++ G+ N +Y L+ G C+ L A + EM+ G
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P+ T L+ GF + + + EA
Sbjct: 500 PDTITCNILLYGFCENEKLEEA 521
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + + M E + P+ + A++ K+G + EA KL M + P+ V Y +++
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K ++ DDAK +F M S P+ ++ ++ C+ R+ + + E+ G
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N TT+ L+ GF + + A+ + +I G
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 189 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI--------------- 230
F K+ + G P+ V +L GLC + + EAL LFG M E G +
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
P ++ + ++ G + +A + KM G+ + +Y +V G+CK + A
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+M E P++ + ++D K+ ++A+ ++EKG N +D
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
++ +++ GL+ N ++ G C+ + A LF M G P+ + ++ G+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ K ++A +F +Q + I + +Y +++ G+CK S++ +A++ + G P++
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 304 TTFVDLVDGFVKEQGVAEA 322
T+ ++ GF + +++A
Sbjct: 573 QTYNVMISGFCGKSAISDA 591
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A E+F+ ++ + + + VA ++ G+CK V EA LF + G P++ Y +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ DA +F KM+ NG P+ +Y L++G K + + E EM G
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 300 SPNMTT 305
S + T
Sbjct: 639 SGDAFT 644
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+ +A+ F M V V+ + + ++ D A ++RKM+ I N +S+ +
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L++ C C +L + ++ + G P++ TF L+ G E ++EA ++E G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 334 FV 335
F+
Sbjct: 207 FL 208
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +F M P+ V ++D C+ V E ++L + +G + Y +
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
+ G+ + + A+ +F++M S+G+ P+ + +L+ G C+ +L++A E
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 217 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 276
A+ L+ M + I + +++ + HK + F K+ G P+ ++ L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 277 GLCKCSRLQDA---FEFCVE------------MLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
GLC R+ +A F + VE M+E G +P + TF L++G E V E
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 322 AKGAIRTLIEKGFVVN 337
A + ++ KG ++
Sbjct: 245 AAALVNKMVGKGLHID 260
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 205 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
++ CK G V+EA+KLF M E G P +V + V++G + D+A KM G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
P +Y++LV+GL + R+ DA+ EM + G PN+ + +L+D F++ + +A
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 325 AIRTLIEKGFVVNEKA----VKGF 344
++ KG + +KG+
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGY 410
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ E F +M + PN V ++ C+ G + AL+L M+ KG P YT++
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G + + ++AK +F +M+ G+ PN F YT L+ G K ++ EM
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
PN T+ ++ G+ ++ V EA + + EKG V + K F+
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F + G+ P+ +L L + Q+ + F ++ KG P++ ++T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAIN 268
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ K K ++A ++F KM+ G++PN ++ ++ GL C R +AF F +M+E G P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ T+ LV G + + + +A ++ + +KGF N +D
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A ++F KM+E G+ PN V ++DGL G EA M E+G P ++ Y+ +
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V+G T+A + DA + ++M G PN Y L+ + L A E M+ G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
S +T+ L+ G+ K A+ ++ ++ GF VN+
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ + MK G+ PN+ +++ G+ V+EA LF MR +G P + YTA+++
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY K + + + R+M S + PN +YTV++ G + + +A EM E G P
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
+ T+ + + G++K+ GV EA
Sbjct: 784 DSITYKEFIYGYLKQGGVLEA 804
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A + + K G++P+ M+DG CK +E + F M K P V+Y +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y ++ + A + M+ GISPN+ +YT L++G+ SR+++A EM G
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ + L+DG+ K + + + +R + K
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + K+M + G PN + ++D + G + +A+++ LM KG Y ++
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY K +AD+A+R+ ++M S G + N S+T ++ LC A F EML S
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
P L+ G K ++A + KGFVV+ + L
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +M + GL P+ ++ GL V+EA++ + + G +P++ Y+ +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G KA + ++ + F +M S + PN Y L++ C+ RL A E +M G
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAK 323
SPN T+ L+ G V EAK
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAK 700
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++ GLCK G +AL+L+ KG + + A++ G +A K D+A RI +++
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G + SY L+ G C +L +AF F EM++ G P+ T+ L+ G V EA
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 65/121 (53%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A+L GLC+ G + EA ++ + +G + + V Y ++ G K D+A +M
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G+ P+ ++Y++L+ GL +++++A +F + G P++ T+ ++DG K + E
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 323 K 323
+
Sbjct: 630 Q 630
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 186 DEIFKKMKET---GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
DE F+ KE G + + V+ ++ G C + EA M ++G P+ Y+ +
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G +K ++A + + + NG+ P+ ++Y+V++ G CK R ++ EF EM+
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 300 SPNMTTFVDLVDGFVK 315
PN + L+ + +
Sbjct: 642 QPNTVVYNHLIRAYCR 657
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A +F++M+ GL PN A++DG K G + + L M K P + YT +
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 289
+ GY + +A R+ +M+ GI P++ +Y + G K + +AF+
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 136 VVNKLGDSFLDKFKLGFDNKAGNSSEVAASN-LSEEAKSANS-----NQPAMPEDADEIF 189
V N L DSF++ G NKA ++ S LS + + N+ + ++A+ +
Sbjct: 367 VYNNLIDSFIEA---GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 190 KKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
K+M G N +++ LC + AL+ G M + P + T ++ G K
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 483
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
K A ++ + + G + + L+ GLC+ +L +AF E+L G + ++
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 307 VDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
L+ G ++ + EA + ++++G
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGL 571
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 205 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
++ CK G V+EA+KLF M E G P +V + V++G + D+A KM G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
P +Y++LV+GL + R+ DA+ EM + G PN+ + +L+D F++ + +A
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 325 AIRTLIEKGFVVNEKA----VKGF 344
++ KG + +KG+
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGY 410
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ E F +M + PN V ++ C+ G + AL+L M+ KG P YT++
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G + + ++AK +F +M+ G+ PN F YT L+ G K ++ EM
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
PN T+ ++ G+ ++ V EA + + EKG V + K F+
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F + G+ P+ +L L + Q+ + F ++ KG P++ ++T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAIN 268
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ K K ++A ++F KM+ G++PN ++ ++ GL C R +AF F +M+E G P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ T+ LV G + + + +A ++ + +KGF N +D
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A ++F KM+E G+ PN V ++DGL G EA M E+G P ++ Y+ +
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V+G T+A + DA + ++M G PN Y L+ + L A E M+ G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
S +T+ L+ G+ K A+ ++ ++ GF VN+
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ + MK G+ PN+ +++ G+ V+EA LF MR +G P + YTA+++
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY K + + + R+M S + PN +YTV++ G + + +A EM E G P
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
+ T+ + + G++K+ GV EA
Sbjct: 784 DSITYKEFIYGYLKQGGVLEA 804
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A + + K G++P+ M+DG CK +E + F M K P V+Y +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y ++ + A + M+ GISPN+ +YT L++G+ SR+++A EM G
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ + L+DG+ K + + + +R + K
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + K+M + G PN + ++D + G + +A+++ LM KG Y ++
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY K +AD+A+R+ ++M S G + N S+T ++ LC A F EML S
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
P L+ G K ++A + KGFVV+ + L
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +M + GL P+ ++ GL V+EA++ + + G +P++ Y+ +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G KA + ++ + F +M S + PN Y L++ C+ RL A E +M G
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAK 323
SPN T+ L+ G V EAK
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAK 700
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++ GLCK G +AL+L+ KG + + A++ G +A K D+A RI +++
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G + SY L+ G C +L +AF F EM++ G P+ T+ L+ G V EA
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 65/121 (53%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A+L GLC+ G + EA ++ + +G + + V Y ++ G K D+A +M
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G+ P+ ++Y++L+ GL +++++A +F + G P++ T+ ++DG K + E
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 323 K 323
+
Sbjct: 630 Q 630
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 186 DEIFKKMKET---GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
DE F+ KE G + + V+ ++ G C + EA M ++G P+ Y+ +
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G +K ++A + + + NG+ P+ ++Y+V++ G CK R ++ EF EM+
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 300 SPNMTTFVDLVDGFVK 315
PN + L+ + +
Sbjct: 642 QPNTVVYNHLIRAYCR 657
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A +F++M+ GL PN A++DG K G + + L M K P + YT +
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 289
+ GY + +A R+ +M+ GI P++ +Y + G K + +AF+
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 136 VVNKLGDSFLDKFKLGFDNKAGNSSEVAASN-LSEEAKSANS-----NQPAMPEDADEIF 189
V N L DSF++ G NKA ++ S LS + + N+ + ++A+ +
Sbjct: 367 VYNNLIDSFIEA---GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 190 KKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
K+M G N +++ LC + AL+ G M + P + T ++ G K
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 483
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
K A ++ + + G + + L+ GLC+ +L +AF E+L G + ++
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 307 VDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
L+ G ++ + EA + ++++G
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGL 571
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+ D+ +KM+E G P+ V ++ C+ G ++EA L+ +M + +P++V YT+++
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G K + +A + F +M GI P+ SY L+ CK +Q + + EML
Sbjct: 314 KGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAI----RTLIEKGFVVNEKAVKGFLDMKKPFS 352
P+ T +V+GFV+E + A + R ++ F V + + KPF+
Sbjct: 374 PDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFA 429
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
ED +++ M G+ PN + + C D +E M E+G P++V Y +
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V Y + + +A +++ M + P+ +YT L++GLCK R+++A + M++ G
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
P+ ++ L+ + KE + ++K + ++
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEML 368
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 51/120 (42%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+++ +++ +M G P + + + + KM+ G P+ +Y
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
LV C+ RL++AF M P++ T+ L+ G K+ V EA ++++G
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 14/230 (6%)
Query: 126 QGRNMSDTNKVVNKLGDSF-----LDKFKLGFD--NKAGNSSEVAASNLSEEAKSANSNQ 178
Q + ++ T V N L D + +D+ + +D + G ++V N ++ N+
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN----TIASCFNR 446
Query: 179 PAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVI 235
++A + +M E G+ + V+ ++D CK+G V+EA +LF M KG P +
Sbjct: 447 LKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT 506
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 295
Y ++ Y K K +A+++ M++NG+ P++++YT L+ G C + +A EM
Sbjct: 507 YNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG 566
Query: 296 EAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
G N T+ ++ G K EA G + KG+ ++ K +
Sbjct: 567 LKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 145/341 (42%), Gaps = 37/341 (10%)
Query: 8 VHKPVSSSQMERLVSLLNSKQPVRHFSFTDDCSGDIKQLMGESDDVSIHKLDPHFSDSSR 67
V K +S + +V L+ +K+ R D C ++++ ++++ L R
Sbjct: 181 VKKGLSIDERSCIVFLVAAKKRRR----IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCR 236
Query: 68 EGSEPIPNRALR--GTQPVNPHSREYNR--GSRSSRPRFDGNRG-----RPDDVEMTNKS 118
G + ++ + + P + YN + + F G G + D V + NK
Sbjct: 237 RGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV-VYNKV 295
Query: 119 SQT---DIGFQGRNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSAN 175
+ T ++ + MSD K+ +++ + ++ + V S +S + N
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIE-----------SDVHVYTSLISWNCRKGN 344
Query: 176 SNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPE 232
+ + +F ++ E GL P++ A++DG+CK G + A L M+ KG
Sbjct: 345 MKRAFL------LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 233 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 292
V++ +++GY + D+A I+ M+ G + F+ + + R +A ++
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 293 EMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
M+E G + ++ +L+D + KE V EAK + KG
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 161 EVAASNLSEEAKSANSNQPAMPEDAD-----EIFKKMKETGLIPNAVA---MLDGLCKDG 212
E + + EA + N+ A + D + K MK+ G++ N V +++ K+G
Sbjct: 249 EFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNG 308
Query: 213 LVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT 272
+ +A KLF MRE+G ++ +YT+++ + A +F ++ G+SP++++Y
Sbjct: 309 KMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYG 368
Query: 273 VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
L+ G+CK + A EM G + F L+DG+ ++ V EA + +K
Sbjct: 369 ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
Query: 333 GF 334
GF
Sbjct: 429 GF 430
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 211 DGLVQEALKLFGLMREKG-TIPE---IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISP 266
+G+ +E L++F M +KG +I E IV A K + D IFR+M +G+
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAA----KKRRRIDLCLEIFRRMVDSGVKI 222
Query: 267 NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAI 326
+S T++V+GLC+ ++ + + E G P T+ +++ +VK++ + +G +
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 327 RTLIEKGFVVNE 338
+ + + G V N+
Sbjct: 283 KVMKKDGVVYNK 294
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + KMK+ PN ++D LC G EA+ LF M E G P+ +YT +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + D+A + M NG+ PN +Y L++G CK + A +MLE
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNL 360
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAV 341
P++ T+ L+ G + A + + E G V N++ V
Sbjct: 361 VPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++FK+M + G N V+ ++ GL + + EAL L M++ P + YT +++
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ + +A +F++M +GI P+ YTVL+Q C L +A MLE G P
Sbjct: 269 ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
N+ T+ L+ GF K + V +A G + ++E+ V
Sbjct: 329 NVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLV 361
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 141 GDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPN 200
GDSF K+KL S +A L EE K ++ +M E + P+
Sbjct: 109 GDSFEIKYKLTPKCYNNLLSSLARFGLVEEMK--------------RLYTEMLEDLVSPD 154
Query: 201 AVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
+++G CK G V EA + + + G P+ YT+ + G+ + + D A ++F+
Sbjct: 155 IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFK 214
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQ 317
+M NG N SYT L+ GL + ++ +A V+M + PN+ T+ L+D
Sbjct: 215 EMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSG 274
Query: 318 GVAEAKGAIRTLIEKGF 334
+EA + + E G
Sbjct: 275 QKSEAMNLFKQMSESGI 291
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+ + G C+ V A K+F M + G V YT ++ G +A K D+A + KM+ +
Sbjct: 195 SFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDD 254
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
PN +YTVL+ LC + +A +M E+G P+ + L+ F + EA
Sbjct: 255 NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEA 314
Query: 323 KGAIRTLIEKGFVVN----EKAVKGF 344
G + ++E G + N +KGF
Sbjct: 315 SGLLEHMLENGLMPNVITYNALIKGF 340
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 295
Y ++ + ++ KR++ +M + +SP+ +++ LV G CK + +A ++ ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 296 EAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE----KAVKGFLDMKK 349
+AG P+ T+ + G + + V A + + + G NE + + G + KK
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + KM GL + V +++G+CK G + AL L M E P++VIY+A++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ K DA+ +F +M GI+PN F+Y ++ G C R DA +M+E +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 301 PNMTTFVDLVDGFVKEQGVAEAK 323
P++ TF L+ VKE + EA+
Sbjct: 364 PDVLTFNALISASVKEGKLFEAE 386
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +F +M E GL P + +++GLC +G V EA L M KG ++V Y +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G K A + KM+ I P+ Y+ ++ LCK DA EMLE G +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
PN+ T+ ++DGF ++A+ +R +IE+
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + KM+ET + P+ V A++D LCKDG +A LF M EKG P + Y +++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ + DA+R+ R M I+P+ ++ L+ K +L +A + C EML P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 302 NMTTFVDLVDGFVKEQGVAEAK 323
+ T+ ++ GF K +AK
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAK 421
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F++M G+ P+ + +L G C++ ++EAL+LF +++ + V Y ++
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K K D+A +F + +G+ P+ +Y V++ G C S + DA +M + GH P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
+ +T+ L+ G +K + ++ I + GF + +K D+
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADL 651
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+++ +M + P+ V +M+ G CK +A +F LM P++V + ++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTII 439
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ Y +A + D+ ++ R++ G+ N +Y L+ G C+ L A + EM+ G
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P+ T L+ GF + + + EA
Sbjct: 500 PDTITCNILLYGFCENEKLEEA 521
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + + M E + P+ + A++ K+G + EA KL M + P+ V Y +++
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K ++ DDAK +F M S P+ ++ ++ C+ R+ + + E+ G
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N TT+ L+ GF + + A+ + +I G
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 189 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI--------------- 230
F K+ + G P+ V +L GLC + + EAL LFG M E G +
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
P ++ + ++ G + +A + KM G+ + +Y +V G+CK + A
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+M E P++ + ++D K+ ++A+ ++EKG N +D
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
++ +++ GL+ N ++ G C+ + A LF M G P+ + ++ G+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ K ++A +F +Q + I + +Y +++ G+CK S++ +A++ + G P++
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 304 TTFVDLVDGFVKEQGVAEA 322
T+ ++ GF + +++A
Sbjct: 573 QTYNVMISGFCGKSAISDA 591
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+ +A+ F M V V+ + + ++ D A ++RKM+ I N +S+ +
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L++ C C +L + ++ + G P++ TF L+ G E ++EA ++E G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 334 FV 335
F+
Sbjct: 207 FL 208
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA +F M P+ V ++D C+ V E ++L + +G + Y +
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
+ G+ + + A+ +F++M S+G+ P+ + +L+ G C+ +L++A E
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 217 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 276
A+ L+ M + I + +++ + HK + F K+ G P+ ++ L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 277 GLCKCSRLQDA---FEFCVE------------MLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
GLC R+ +A F + VE M+E G +P + TF L++G E V E
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 322 AKGAIRTLIEKGFVVN 337
A + ++ KG ++
Sbjct: 245 AAALVNKMVGKGLHID 260
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++AD M + G IP+ +L LC++GLV A+ F M + G P ++ +T++
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 293
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-G 298
++G K A + +M NG PN +++T L+ GLCK + AF ++++ +
Sbjct: 294 IDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT 353
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+ PN+ T+ ++ G+ KE + A+ + E+G N
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ + E A+ +F +M G++P++ + M+ G +DG +QEA + M ++G IP+
Sbjct: 194 ELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNA 253
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
T ++ + + A FRKM G PN ++T L+ GLCK ++ AFE EM
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKP 350
+ G PN+ T L+DG K R EK F + K V+ D KP
Sbjct: 314 VRNGWKPNVYTHTALIDGLCK-----------RGWTEKAFRLFLKLVRS--DTYKP 356
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 185 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+ +F +MKE GL PN +++G CK G A +L LM ++G +P I Y A ++
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K +A +A + K S G+ + +YT+L+Q CK + + A F M + G
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
+M L+ F +++ + E++ + ++ G +
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 167 LSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGL 223
+ E+ K + NQ A F +M +TG + ++ C+ ++E+ +LF L
Sbjct: 470 IQEQCKQNDINQ------ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
+ G IP YT+++ Y K D A + F M+ +G P++F+Y L+ GLCK S
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
+ +A + M++ G SP T V L + K A A + L +K ++
Sbjct: 584 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWI 635
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 8/175 (4%)
Query: 183 EDADEIFKKMKETGLI-PNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
E A +F K+ + PN +M+ G CK+ + A LF M+E+G P + YT
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ G+ KA A + M G PN ++Y + LCK SR +A+E + G
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGFLDMKK 349
+ T+ L+ K+ + +A + + GF +N + F KK
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 513
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 192 MKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 248
M+ GL P+++ M L+ + GL++ A +F M +G +P+ Y +V G + K
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 249 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVD 308
+A R M G P+ + T+++ LC+ + A + +M++ G PN+ F
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 309 LVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
L+DG K+ + +A + ++ G+ N +D
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A E+ K GL + V ++ CK + +AL F M + G ++ + ++
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ + K +++R+F+ + S G+ P +YT ++ CK + A ++ M G
Sbjct: 506 AAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 565
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
P+ T+ L+ G K+ V EA +I++G
Sbjct: 566 PDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 17/302 (5%)
Query: 36 TDDCSGDIKQLMGESDDVSIHKLDPHFSDSSREGSEPIPNRALRGTQPVNPHSREYNRGS 95
T SG + SDD +I F SRE + P A Q NP N S
Sbjct: 243 TRYASGGCDYSVHSSDDRTIISSVEGFGKPSREMMKVTPRTAPTPRQHCNPGYVVENVSS 302
Query: 96 RSSRPRFDGNRGRPDDVEMTNKSSQTDIGFQGRNMSDTNKVVNKLGDSFLDKFKLGFDNK 155
R ++ G + + N + D + + + N LG + K + GF +
Sbjct: 303 ILRRFKW----GHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHD 358
Query: 156 AGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDG 212
G++ NL + N+ + +M G PN V ++ +
Sbjct: 359 -GHTYTTMVGNLGRAKQFGEINK---------LLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 213 LVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT 272
++EA+ +F M+E G P+ V Y +++ + KA D A ++++MQ G+SP+ F+Y+
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 273 VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
V++ L K L A EM+ G +PN+ TF ++ K + A R +
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 333 GF 334
GF
Sbjct: 529 GF 530
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +++++M+E GL P+ +++ L K G + A +LF M +G P +V + ++
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ KA + A +++R MQ+ G P+ +Y+++++ L C L++A EM P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
+ + LVD + K V +A + +++ G N L
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +F +M+E G P+ V ++D K G + A+ ++ M+E G P+ Y+ +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ KA A R+F +M G +PN ++ +++ K + A + +M AG
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
P+ T+ +++ + EA+G + K +V +E +D+
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDL 578
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++++ M+ G P+ V +++ L G ++EA +F M+ K +P+ +Y +
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V+ + KA D A + ++ M G+ PN + L+ + R+ +A+ ML G
Sbjct: 576 VDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Query: 300 SPNMTTFVDLV 310
P++ T+ L+
Sbjct: 636 HPSLQTYTLLL 646
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%)
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
E KL M G P V Y ++ Y +A+ +A +F +MQ G P+ +Y L+
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI 436
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
K L A + M EAG SP+ T+ +++ K + A ++ +G
Sbjct: 437 DIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT 496
Query: 336 VN 337
N
Sbjct: 497 PN 498
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Query: 192 MKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 248
M + P + +M+DG CK V +A ++ M KG P++V ++ ++ GY KA +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 249 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVD 308
D+ IF +M GI N +YT L+ G C+ L A + EM+ G +P+ TF
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 309 LVDGFVKEQGVAEAKGAIRTL 329
++ G ++ + +A + L
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
M P + Y ++++G+ K + DDAKR+ M S G SP+ +++ L+ G CK R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ + E EM G N T+ L+ GF + + A+ + +I G
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 110
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 182 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREK---GTIPEIVI 235
P A + M+E G+ P + ++DGL + G + EA K F M E G P++V
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYF--MDETVKVGCTPDVVC 364
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 295
YT ++ GY + + A+ +F++M G PN F+Y +++G C + ++A EM
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 296 EAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
G +PN + LV+ V EA ++ ++EKG V+
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVH 466
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 186 DEIFKKMKETGLIPNA----VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
D ++++M E G P+ + M + G +L M + G P++ Y ++
Sbjct: 242 DWVYEQMLEDGFTPDVLTYNIVMFANF-RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH 300
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+K A + M+ G+ P +T L+ GL + +L+ F E ++ G +P
Sbjct: 301 HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTP 360
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ + ++ G++ + +A+ + + EKG
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++K+M+ + N V A++DG CK G +Q A +++ M E P ++YT +
Sbjct: 215 EVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ + +D+A + KM + G+ + +Y V++ GLC +L++A E +M ++
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
P+M F +++ + K + A LIE+GF + A+ +D
Sbjct: 335 VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 186 DEIFKKMKETGLI-----PNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
DE+F M G++ PN V +D CK G +Q ALK F M+ P +V +T
Sbjct: 146 DEVFVYM---GVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFT 202
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+++GY KA + A ++++M+ +S N +YT L+ G CK +Q A E M+E
Sbjct: 203 CLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 298 GHSPNMTTFVDLVDGFVK 315
PN + ++DGF +
Sbjct: 263 RVEPNSLVYTTIIDGFFQ 280
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ K+ E G P+ VA M+DG+ K+G + EA+ F + + V+YT +++
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMYTVLID 411
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K + +R+F K+ G+ P+ F YT + GLCK L DAF+ M++ G
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++ + L+ G + + EA+ ++ G
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++D LCK+G E +LF + E G +P+ +YT+ + G K DA ++ +M
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G+ + +YT L+ GL + +A + EML +G SP+ F L+ + KE +A A
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Query: 323 KGAIRTLIEKGFV 335
+ + +G V
Sbjct: 528 SDLLLDMQRRGLV 540
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEA-LKLFGLMREKGTI--PEIVIYTA 238
A++I M G P+ ++ ++DG C++G ++ A L L L G I P+IV + +
Sbjct: 75 AEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNS 134
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+ G++K D+ ++ + SPN +Y+ + CK LQ A + M
Sbjct: 135 LFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA 193
Query: 299 HSPNMTTFVDLVDGFVK----EQGVAEAKGAIRTLIEKGFVVNEKAVKGF 344
SPN+ TF L+DG+ K E V+ K R + V + GF
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + KM G+ + A ++ GLC +G ++EA ++ M + +P++VI+T +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAF-EFCVEMLEAG 298
+ Y K+ + A ++ K+ G P+ + + ++ G+ K +L +A FC+E
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE----- 399
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
N + L+D KE E + + E G V
Sbjct: 400 -KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV 435
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A EI + M+++ L+P+ V M++ K G ++ A+ ++ + E+G P++V + +
Sbjct: 320 KEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G K + +A F ++N + YTVL+ LCK + ++ EAG
Sbjct: 380 IDGIAKNGQLHEAIVYFCIEKANDVM-----YTVLIDALCKEGDFIEVERLFSKISEAGL 434
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA 340
P+ + + G K+ + +A ++++G +++ A
Sbjct: 435 VPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA 475
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 197 LIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIF 256
+IP +V ML GLCK G + EAL LF M+ G P++V Y+ V+ G K K D A ++
Sbjct: 363 IIPCSV-MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 257 RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKE 316
+M I PN+ ++ L+ GLC+ L +A ++ +G + ++ + ++DG+ K
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 317 QGVAEAKGAIRTLIEKGF 334
+ EA + +IE G
Sbjct: 482 GCIEEALELFKVVIETGI 499
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +M + ++PN+ A+L GLC+ G++ EA L + G +IV+Y V++
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY K+ ++A +F+ + GI+P+ ++ L+ G CK + +A + + G +P
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 536
Query: 302 NMTTFVDLVDGF 313
++ ++ L+D +
Sbjct: 537 SVVSYTTLMDAY 548
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 166 NLSEEAKSANSNQPAMPED--ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGL 223
NL+ +S NS E +++K++K+ + ++DGLC+ +++A+
Sbjct: 154 NLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYS-TVVDGLCRQQKLEDAVLFLRT 212
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
K P +V + +++ GY K D AK F + G+ P+ +S+ +L+ GLC
Sbjct: 213 SEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGS 272
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ +A E +M + G P+ T+ L GF ++ A IR +++KG
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 9/179 (5%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q M +A + + +G + V ++DG K G ++EAL+LF ++ E G P +
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+ +++ GY K +A++I ++ G++P+ SYT L+ C + E EM
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSP 353
G P T+ + G + +R E+ F EK +G DM+ P
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR---ERIF---EKCKQGLRDMESEGIP 617
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
EDA + + + P+ V+ ++ G CK G V A F + + G +P + + +
Sbjct: 204 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 263
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G +A + M +G+ P++ +Y +L +G + A+E +ML+ G
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
SP++ T+ L+ G + + ++ ++ +GF +N
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 39/189 (20%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT--- 237
+A E+ M + G+ P++V + G G++ A ++ M +KG P+++ YT
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Query: 238 ---------------------------------AVVEGYTKAHKADDAKRIFRKMQSNGI 264
++ G K + D+A +F +M+++G+
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
SP+ +Y++++ GLCK + A EM + PN T L+ G ++ + EA+
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 325 AIRTLIEKG 333
+ +LI G
Sbjct: 455 LLDSLISSG 463
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 197 LIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIF 256
+IP +V ML GLCK G + EAL LF M+ G P++V Y+ V+ G K K D A ++
Sbjct: 363 IIPCSV-MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 257 RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKE 316
+M I PN+ ++ L+ GLC+ L +A ++ +G + ++ + ++DG+ K
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 317 QGVAEAKGAIRTLIEKGF 334
+ EA + +IE G
Sbjct: 482 GCIEEALELFKVVIETGI 499
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +M + ++PN+ A+L GLC+ G++ EA L + G +IV+Y V++
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY K+ ++A +F+ + GI+P+ ++ L+ G CK + +A + + G +P
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 536
Query: 302 NMTTFVDLVDGF 313
++ ++ L+D +
Sbjct: 537 SVVSYTTLMDAY 548
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 166 NLSEEAKSANSNQPAMPED--ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGL 223
NL+ +S NS E +++K++K+ + ++DGLC+ +++A+
Sbjct: 154 NLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYS-TVVDGLCRQQKLEDAVLFLRT 212
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
K P +V + +++ GY K D AK F + G+ P+ +S+ +L+ GLC
Sbjct: 213 SEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGS 272
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ +A E +M + G P+ T+ L GF ++ A IR +++KG
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 9/179 (5%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q M +A + + +G + V ++DG K G ++EAL+LF ++ E G P +
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+ +++ GY K +A++I ++ G++P+ SYT L+ C + E EM
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSP 353
G P T+ + G + +R E+ F EK +G DM+ P
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR---ERIF---EKCKQGLRDMESEGIP 617
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
EDA + + + P+ V+ ++ G CK G V A F + + G +P + + +
Sbjct: 204 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 263
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G +A + M +G+ P++ +Y +L +G + A+E +ML+ G
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
SP++ T+ L+ G + + ++ ++ +GF +N
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 39/189 (20%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT--- 237
+A E+ M + G+ P++V + G G++ A ++ M +KG P+++ YT
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Query: 238 ---------------------------------AVVEGYTKAHKADDAKRIFRKMQSNGI 264
++ G K + D+A +F +M+++G+
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
SP+ +Y++++ GLCK + A EM + PN T L+ G ++ + EA+
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 325 AIRTLIEKG 333
+ +LI G
Sbjct: 455 LLDSLISSG 463
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 185 ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
A+ I KK++ T + +++ G C G + +AL+L+ M KG P I +T ++ G
Sbjct: 461 AEMINKKLEPT--VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+A DA ++F +M + PN +Y V+++G C+ + AFEF EM E G P+
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
++ L+ G +EAK + L + +NE G L
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 191 KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAH 247
+M +TGL + ++++G CK G + A M K P +V YT+++ GY
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 248 KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFV 307
K + A R++ +M GI+P+ +++T L+ GL + ++DA + EM E PN T+
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 308 DLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
+++G+ +E +++A ++ + EKG V
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ + DA ++F +M E + PN V M++G C++G + +A + M EKG +P+
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
Y ++ G +A +AK + N YT L+ G C+ +L++A C EM
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMK 348
++ G ++ + L+DG +K + G ++ + ++G ++ +D K
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 185 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +M G+ P+ +L GL + GL+++A+KLF M E P V Y ++E
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY + A ++M GI P+ +SY L+ GLC + +A F V+ L G+
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF-VDGLHKGNCE 609
Query: 302 -NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N + L+ GF +E + EA + ++++G
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++++GL K G ++EAL L + + G P + +Y A+++ K K +A+ +F +M
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G+ PN +Y++L+ C+ +L A F EM++ G ++ + L++G K ++ A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 323 KGAIRTLIEK 332
+G + +I K
Sbjct: 457 EGFMAEMINK 466
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 160 SEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQE 216
SE A S+L E + + E+A + K++ + G+ PN A++D LCK E
Sbjct: 331 SEAAVSSLVEGLR-----KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 217 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 276
A LF M + G P V Y+ +++ + + K D A +M G+ + + Y L+
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 277 GLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
G CK + A F EM+ P + T+ L+ G+ + + +A + KG
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+A+ +F +M + GL PN V ++D C+ G + AL G M + G + Y ++
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ K A+ +M + + P +YT L+ G C ++ A EM G
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
+P++ TF L+ G + + +A
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDA 526
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 205 LDGLCKDGLVQEALK------LFGLMRE---KGTIPEIVIYTAVVEGYTKAHKADDAKRI 255
LD +C L+ +LK FGL++E +G P+ VIYT++++ +K +A I
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 256 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
+ M + G PN +YT ++ GLCK + +A C +M PN T+ +D K
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 316 EQGVAEAKGAIRTLIEKGFVVNEKA----VKGF 344
+ + + I KG + N ++GF
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 160 SEVAASNLSEEAKSANSNQPAMPEDAD-----EIFKKMKETGLIPNAVA---MLDGLCKD 211
+E+A N+ + N E+ D E K+M E G++P+ + ++ GLC
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 212 GLVQEALKLF--GLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 269
G EA K+F GL + + EI YT ++ G+ + K ++A + ++M G+ +
Sbjct: 591 GQASEA-KVFVDGLHKGNCELNEIC-YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 270 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
Y VL+ G K + F EM + G P+ + ++D K EA G +
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 330 IEKGFVVNE 338
I +G V NE
Sbjct: 709 INEGCVPNE 717
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 3/165 (1%)
Query: 185 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+F M G+ P+ ++ LC+ + A ++ M G IV Y +++
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K K +A I + + + P+ +Y LV GLCK + E EML SP
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ LV+G K + EA ++ +++ G N +D
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 38/196 (19%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMRE------------- 226
++A I+ M G +PN V A+++GLCK G V EA L M+
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 227 ----------------------KGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
KG + Y ++ G+ + + ++A + +M +G+
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
SP+ +YT ++ LC+ + ++ A E M E G P+ + L+ G + +A
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 325 AIRTLIEKGFVVNEKA 340
++ +G + N K
Sbjct: 879 LRNEMLRQGLIPNNKT 894
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 184 DADEIFKKM-KETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
D +FK M + L+P A+L GL K A++LF M G P++ IYT V
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + AK + M++ G N Y VL+ GLCK ++ +A ++
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 300 SPNMTTFVDLVDGFVKEQ 317
P++ T+ LV G K Q
Sbjct: 294 KPDVVTYCTLVYGLCKVQ 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ M+ TG N V ++DGLCK V EA+ + + K P++V Y +V
Sbjct: 246 AKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVY 305
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K + + + +M SP+ + + LV+GL K ++++A +++ G SP
Sbjct: 306 GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
N+ + L+D K + EA+ + + G N+ +DM
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIF---RKM 259
+L G C++G ++EAL + M ++G ++V Y +++G K HK D K F ++M
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK-HK--DRKLFFGLLKEM 673
Query: 260 QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGV 319
G+ P+ YT ++ K ++AF M+ G PN T+ +++G K V
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 320 AEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
EA+ + V N+ FLD+
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDI 761
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 214 VQEALKLFGLMREK-GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT 272
V + + +F +M K +PE+ +A++ G K A +F M S GI P+ + YT
Sbjct: 172 VLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYT 231
Query: 273 VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
+++ LC+ L A E M G N+ + L+DG K+Q V EA G
Sbjct: 232 GVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVG 283
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 196 GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDA 252
GLIPN ++ ++ CK A KL M E+G P+IV Y ++ G + DDA
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Query: 253 KRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDG 312
+ K+ G+SP+A Y +L+ GLCK R A EML+ P+ + L+DG
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Query: 313 FVKEQGVAEAKGAIRTLIEKGF---VVNEKA-VKGF 344
F++ EA+ +EKG VV+ A +KGF
Sbjct: 495 FIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGF 530
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++F E G+ + V AM+ G C+ G++ EAL M E+ +P+ Y+ +
Sbjct: 502 DEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++GY K A +IFR M+ N PN +YT L+ G C + A E EM
Sbjct: 562 IDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
Query: 300 SPNMTTFVDLVDGFVKEQGVAE 321
PN+ T+ L+ KE E
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLE 643
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA + K+ + G+ P+A ++ GLCK G A LF M ++ +P+ +Y +
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ ++ D+A+++F G+ + + +++G C+ L +A M E
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
P+ T+ ++DG+VK+Q +A A R +
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +F +M + ++P+A ++DG + G EA K+F L EKG ++V + A+++
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ ++ D+A +M + P+ F+Y+ ++ G K + A + M + P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 302 NMTTFVDLVDGF 313
N+ T+ L++GF
Sbjct: 589 NVVTYTSLINGF 600
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 184 DADEIFKKMKETG-LIPN--AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA +++ +M + G + N ++ G+C +G V+ KL KG IP IV Y ++
Sbjct: 188 DARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTII 247
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK 280
GY K ++A +F++++ G P ++ ++ G CK
Sbjct: 248 GGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 38/189 (20%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKG----------- 228
E+A +FK++K G +P M++G CK+G + +L ++E+G
Sbjct: 257 ENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNI 316
Query: 229 ------------------------TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
P++ Y ++ K K + A + G+
Sbjct: 317 IDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGL 376
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
PN SY L+Q CK A + ++M E G P++ T+ L+ G V + +A
Sbjct: 377 IPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVN 436
Query: 325 AIRTLIEKG 333
LI++G
Sbjct: 437 MKVKLIDRG 445
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 198 IPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKR 254
+P+ +A +L L K + +A K++ M ++G + +V+G K + ++
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 255 IFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFV 314
+ G PN Y ++ G CK +++A+ E+ G P + TF +++GF
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 315 KEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMK 348
KE + + + E+G V+ + +D K
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAK 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDG-LVQEALKLFGLMREKGTIPEIVIYTAVV 240
A+E FK+M+ L+PN V ++ L K+ +++A+ + LM +P V + ++
Sbjct: 609 AEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Query: 241 EGYTKAH--------------KADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD 286
+G+ K ++ F +M+S+G S +A +Y + LC ++
Sbjct: 669 QGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKT 728
Query: 287 AFEFCVEMLEAGHSPNMTTFVDLVDGF 313
A F +M++ G SP+ +F ++ GF
Sbjct: 729 ACMFQDKMVKKGFSPDPVSFAAILHGF 755
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 17/276 (6%)
Query: 62 FSDSSREGSEPIPNRALRGTQPVNPHSREYNRGSRSSRPRFDGNRGRPDDVEMTNKSSQT 121
FS+SS E + AL Q N N S R R+ G + + N +
Sbjct: 274 FSNSSVEMMKGPSGTALTSRQYCNSGHIVENVSSVLRRFRW----GPAAEEALQNLGLRI 329
Query: 122 DIGFQGRNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAM 181
D + + N N LG + K + GF + G++ NL + N+
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHD-GHTYTTMVGNLGRAKQFGAINK--- 385
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
+ +M G PN V ++ + + EA+ +F M+E G P+ V Y
Sbjct: 386 ------LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++ + KA D A ++++MQ+ G+SP+ F+Y+V++ L K L A + EM++ G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+PN+ T+ ++D K + A R + GF
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +++++M+ GL P+ +++ L K G + A KLF M ++G P +V Y +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ KA +A +++R MQ+ G P+ +Y+++++ L C L++A EM + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
+ + LVD + K V +A + ++ G N L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F +M + G PN V M+D K Q ALKL+ M+ G P+ V Y+ V+E
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
++A+ +F +MQ P+ Y +LV K ++ A+++ ML AG P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
N+ T L+ F++ +AEA ++ ++ G
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++++ M+ G P+ V +++ L G ++EA +F M++K IP+ +Y +
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V+ + KA + A + ++ M G+ PN + L+ + +++ +A+E ML G
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 300 SPNMTTFVDLV 310
P++ T+ L+
Sbjct: 641 RPSLQTYTLLL 651
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A +I ++M G+ + V A+L G K G E K+F M+ + +P ++ Y+ +
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++GY+K +A IFR+ +S G+ + Y+ L+ LCK + A EM + G
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 300 SPNMTTFVDLVDGF 313
SPN+ T+ ++D F
Sbjct: 581 SPNVVTYNSIIDAF 594
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A EI +M ++PN V+ ++DG K G EAL LFG MR G + V Y ++
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
YTK ++++A I R+M S GI + +Y L+ G K + + + EM P
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
N+ T+ L+DG+ K EA R G + +D
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 126 QGRNMSDTNKVVNKLGDSFLDK--FKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPE 183
QG+ S + + G + K F+ F GN+ ++ +S +S + E
Sbjct: 232 QGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSG------LHE 285
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGL-VQEALKLFGLMREKGTIPEIVIYTAV 239
+A +F MKE GL PN V A++D K G+ ++ K F M+ G P+ + + ++
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ ++ + A+ +F +M + I + FSY L+ +CK ++ AFE +M
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
PN+ ++ ++DGF K EA
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEA 428
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +F +M+ G+ + V+ +L K G +EAL + M G ++V Y A+
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ GY K K D+ K++F +M+ + PN +Y+ L+ G K ++A E E AG
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
++ + L+D K V A I + ++G N +D
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+LD +CK G + A ++ M K +P +V Y+ V++G+ KA + D+A +F +M+ G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
I+ + SY L+ K R ++A + EM G ++ T+ L+ G+ K+ E K
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++ ++F +MK ++PN + ++DG K GL +EA+++F + G ++V+Y+A+
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
++ K A + +M GISPN +Y ++ + + + + ++
Sbjct: 556 IDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 17/276 (6%)
Query: 62 FSDSSREGSEPIPNRALRGTQPVNPHSREYNRGSRSSRPRFDGNRGRPDDVEMTNKSSQT 121
FS+SS E + AL Q N N S R R+ G + + N +
Sbjct: 274 FSNSSVEMMKGPSGTALTSRQYCNSGHIVENVSSVLRRFRW----GPAAEEALQNLGLRI 329
Query: 122 DIGFQGRNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAM 181
D + + N N LG + K + GF + G++ NL + N+
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHD-GHTYTTMVGNLGRAKQFGAINK--- 385
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
+ +M G PN V ++ + + EA+ +F M+E G P+ V Y
Sbjct: 386 ------LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++ + KA D A ++++MQ+ G+SP+ F+Y+V++ L K L A + EM++ G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+PN+ T+ ++D K + A R + GF
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +++++M+ GL P+ +++ L K G + A KLF M ++G P +V Y +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ KA +A +++R MQ+ G P+ +Y+++++ L C L++A EM + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
+ + LVD + K V +A + ++ G N L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F +M + G PN V M+D K Q ALKL+ M+ G P+ V Y+ V+E
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
++A+ +F +MQ P+ Y +LV K ++ A+++ ML AG P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
N+ T L+ F++ +AEA ++ ++ G
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++++ M+ G P+ V +++ L G ++EA +F M++K IP+ +Y +
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V+ + KA + A + ++ M G+ PN + L+ + +++ +A+E ML G
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 300 SPNMTTFVDLV 310
P++ T+ L+
Sbjct: 641 RPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 17/276 (6%)
Query: 62 FSDSSREGSEPIPNRALRGTQPVNPHSREYNRGSRSSRPRFDGNRGRPDDVEMTNKSSQT 121
FS+SS E + AL Q N N S R R+ G + + N +
Sbjct: 274 FSNSSVEMMKGPSGTALTSRQYCNSGHIVENVSSVLRRFRW----GPAAEEALQNLGLRI 329
Query: 122 DIGFQGRNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAM 181
D + + N N LG + K + GF + G++ NL + N+
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHD-GHTYTTMVGNLGRAKQFGAINK--- 385
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
+ +M G PN V ++ + + EA+ +F M+E G P+ V Y
Sbjct: 386 ------LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++ + KA D A ++++MQ+ G+SP+ F+Y+V++ L K L A + EM++ G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+PN+ T+ ++D K + A R + GF
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +++++M+ GL P+ +++ L K G + A KLF M ++G P +V Y +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ KA +A +++R MQ+ G P+ +Y+++++ L C L++A EM + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
+ + LVD + K V +A + ++ G N L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F +M + G PN V M+D K Q ALKL+ M+ G P+ V Y+ V+E
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
++A+ +F +MQ P+ Y +LV K ++ A+++ ML AG P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
N+ T L+ F++ +AEA ++ ++ G
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++++ M+ G P+ V +++ L G ++EA +F M++K IP+ +Y +
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V+ + KA + A + ++ M G+ PN + L+ + +++ +A+E ML G
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 300 SPNMTTFVDLV 310
P++ T+ L+
Sbjct: 641 RPSLQTYTLLL 651
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 187 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+F +MK + P+ ++DGLCK + +A +LF M + +P ++ Y +++GY
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
KA + + ++ +M+++ I P+ ++ L++GL K ++DA EM + G P+
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
TF L DG+ + A G T ++ G +N
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A++ KMK G+ P+ ++ G + + + M + GT+P +V Y +
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ K K +A+ + R M+ G+SP Y +L+ G C +++DAF F EML+ G
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
N+ T+ L+DG ++EA+ + + KG
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 100/251 (39%), Gaps = 52/251 (20%)
Query: 148 FKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMP--------------EDADEIFKKMK 193
F + FD + N AA + E A + A E A+EI +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 194 ETGLIPNAV---AMLDGLCKDG-LVQEALKLFGL-------------------------- 223
GL+PN V M+DG C+ G LV +K+ +
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 224 --------MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
M+ KG P + Y ++ GY + ++ D I ++M+ NG PN SY L+
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
LCK S+L +A +M + G SP + + L+DG + + +A + +++KG
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 336 VNEKAVKGFLD 346
+N +D
Sbjct: 562 LNLVTYNTLID 572
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+I K+M++ G +PN V+ +++ LCK + EA + M ++G P++ IY +++G
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K +DA R ++M GI N +Y L+ GL +L +A + +E+ G P++
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 304 TTFVDLVDGF 313
T+ L+ G+
Sbjct: 600 FTYNSLISGY 609
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
PE + ++ ++MK + P+ + +L GL K G+V++A + M++ G +P+ ++
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+ +GY+ KA+ A ++ +G+ NA++ ++L+ LCK +++ A E + G
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN + ++DG+ ++ + A+ I + ++G
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 38/174 (21%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---------------------------------- 203
+ M EDA+ + K+MK+ G +P+A
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 204 ----MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM 259
+L+ LCK+G +++A ++ G KG +P VIY +++GY + A+ M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 260 QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF 313
+ G+ P+ +Y L++ C+ +++A + +M G SP++ T+ L+ G+
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 177 NQPAMPEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEI 233
N+ M +A ++F ++ G+ P++ +LD L K + + +F + E P
Sbjct: 120 NESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSK 179
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
+Y ++ K +F +M+ + I P+ F Y VL+ GLCK R+ DA + E
Sbjct: 180 FMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 294 MLEAGHSPNMTTFVDLVDGFVK 315
ML P++ T+ L+DG+ K
Sbjct: 240 MLARRLLPSLITYNTLIDGYCK 261
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA+++F +M L+P+ + ++DG CK G +++ K+ M+ P ++ + ++
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G KA +DA+ + ++M+ G P+AF++++L G + + A +++G
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVK 351
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
N T L++ KE + +A+ + + KG V NE +D
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
V + L+LF M+ P + IY +++G K + +DA+++F +M + + P+ +Y
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGH-SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
L+ G CK + +F+ E ++A H P++ TF L+ G K V +A+ ++ + +
Sbjct: 255 LIDGYCKAGNPEKSFKV-RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
Query: 333 GFV 335
GFV
Sbjct: 314 GFV 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + + M++ G+ P ++DG C G +++A + M +KG +V Y ++
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G + K +A+ + ++ G+ P+ F+Y L+ G +Q EM +G
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 301 PNMTTFVDLVDGFVKE 316
P + T+ L+ KE
Sbjct: 632 PTLKTYHLLISLCTKE 647
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 161 EVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEA 217
E +A+ + K A S + + P KK+ L+PN + + GLCK G +++A
Sbjct: 690 EASATTCLKTQKIAESVENSTP-------KKL----LVPNNIVYNVAIAGLCKAGKLEDA 738
Query: 218 LKLFG-LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 276
KLF L+ IP+ YT ++ G A + A + +M GI PN +Y L++
Sbjct: 739 RKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIK 798
Query: 277 GLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
GLCK + A ++ + G +PN T+ L+DG VK VAEA +IEKG V
Sbjct: 799 GLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ + E+A+ +F+ +KE L+ + ++DG C+ G +++A+++ M E G
Sbjct: 308 KKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTT 367
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
I +++ GY K+ + +A++IF +M + P+ +Y LV G C+ + +A + C +M
Sbjct: 368 ICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPF--- 351
+ P + T+ L+ G+ + + + ++++G +E + L+
Sbjct: 428 CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDF 487
Query: 352 --SPSVWEAIFGK 362
+ +WE + +
Sbjct: 488 NEAMKLWENVLAR 500
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 177 NQPAMPEDAD---EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI 230
N AM D + + + M E G+ N V +++ G CK GL++EA +F L++EK +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
+ +Y +++GY + + DA R+ M G+ N L+ G CK +L +A +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
M + P+ T+ LVDG+ + V EA
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 184 DADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A++IF +M + L P+ ++DG C+ G V EALKL M +K +P ++ Y ++
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY++ D +++ M G++ + S + L++ L K +A + +L G
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 301 PNMTTFVDLVDGFVKEQGVAEAK 323
+ T ++ G K + V EAK
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAK 526
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 184 DADEIFKKMKET--GLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
D +F K E+ GL N V ++++G G V+ ++ LM E+G +V YT+
Sbjct: 242 DKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTS 301
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++GY K ++A+ +F ++ + + Y VL+ G C+ +++DA M+E G
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAK 323
N T L++G+ K + EA+
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAE 386
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Query: 158 NSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLV 214
N+ E++ S L E AM ++++ + GL+ + + M+ GLCK V
Sbjct: 468 NADEISCSTLLEALFKLGDFNEAM-----KLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 215 QEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVL 274
EA ++ + P + Y A+ GY K +A + M+ GI P Y L
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL 582
Query: 275 VQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ G K L + +E+ G +P + T+ L+ G+ + +A +IEKG
Sbjct: 583 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Query: 335 VVN 337
+N
Sbjct: 643 TLN 645
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 226 EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSRL 284
+K +P ++Y + G KA K +DA+++F + S+ P+ ++YT+L+ G +
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 285 QDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGF 344
AF EM G PN+ T+ L+ G K V A+ + L +KG N
Sbjct: 772 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTL 831
Query: 345 LD 346
+D
Sbjct: 832 ID 833
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M E G+ N ++++G CK G + EA ++F M + P+ Y +V
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY +A D+A ++ +M + P +Y +L++G + D ML+ G +
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA----VKGFLDMKK 349
+ + L++ K EA ++ +G + + + G M+K
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEK 521
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A+ G K G ++EA + M KG P I +Y ++ G K + + ++++
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 605
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G++P +Y L+ G C + A+ C EM+E G + N+ + + + + EA
Sbjct: 606 GLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA 665
Query: 323 KGAIRTLIEKGFVV-NEKAVKGFLD 346
++ +++ ++ +++K FL+
Sbjct: 666 CLLLQKIVDFDLLLPGYQSLKEFLE 690
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 20/185 (10%)
Query: 182 PEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQE-------------------ALKLFG 222
P D I K E GL+ NA+ + D + G + AL ++
Sbjct: 155 PTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYD 214
Query: 223 LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKC 281
M P++ + VV Y ++ D A ++ +S+ G+ N +Y L+ G
Sbjct: 215 QMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 282 SRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAV 341
++ M E G S N+ T+ L+ G+ K+ + EA+ L EK V ++
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 342 KGFLD 346
+D
Sbjct: 335 GVLMD 339
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 3/180 (1%)
Query: 164 ASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKL 220
A+++S A + + A ++ M ++GL PN V ++ G C+ +QEA K+
Sbjct: 271 ATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKV 330
Query: 221 FGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK 280
FG M+ P V Y ++ GY++ + A R + M NGI + +Y L+ GLCK
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK 390
Query: 281 CSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA 340
++ + A +F E+ + PN +TF L+ G + +++I G NE+
Sbjct: 391 QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+ + M+ G V+ ++ G C+ GL+ ALKL +M + G P +V + ++ G+
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+A K +A ++F +M++ ++PN +Y L+ G + + AF F +M+ G ++
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
T+ L+ G K+ +A ++ L ++ V N +
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++F +MK + PN V +++G + G + A + + M G +I+ Y A+
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K K A + +++ + PN+ +++ L+ G C FE M+ +G
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC 444
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAV 341
PN TF LV F + + A +R ++ + ++ + V
Sbjct: 445 HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTV 486
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + F +MK+ G +P + A + L G V AL+ + MR P V+
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY ++ K D + + M+ G SY L+ G C+ L A + M ++G
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
PN+ TF L+ GF + + EA
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEA 327
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 185 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +++M+ + PN + + G C+ G + + ++L M G V Y ++
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ + A ++ M +G+ PN ++ L+ G C+ +LQ+A + EM +P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 302 NMTTFVDLVDGFVKE 316
N T+ L++G+ ++
Sbjct: 342 NTVTYNTLINGYSQQ 356
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 3/180 (1%)
Query: 164 ASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKL 220
A+++S A + + A ++ M ++GL PN V ++ G C+ +QEA K+
Sbjct: 271 ATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKV 330
Query: 221 FGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK 280
FG M+ P V Y ++ GY++ + A R + M NGI + +Y L+ GLCK
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK 390
Query: 281 CSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA 340
++ + A +F E+ + PN +TF L+ G + +++I G NE+
Sbjct: 391 QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+ + M+ G V+ ++ G C+ GL+ ALKL +M + G P +V + ++ G+
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+A K +A ++F +M++ ++PN +Y L+ G + + AF F +M+ G ++
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
T+ L+ G K+ +A ++ L ++ V N +
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++F +MK + PN V +++G + G + A + + M G +I+ Y A+
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K K A + +++ + PN+ +++ L+ G C FE M+ +G
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC 444
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAV 341
PN TF LV F + + A +R ++ + ++ + V
Sbjct: 445 HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTV 486
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + F +MK+ G +P + A + L G V AL+ + MR P V+
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY ++ K D + + M+ G SY L+ G C+ L A + M ++G
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
PN+ TF L+ GF + + EA
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEA 327
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 185 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +++M+ + PN + + G C+ G + + ++L M G V Y ++
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ + A ++ M +G+ PN ++ L+ G C+ +LQ+A + EM +P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 302 NMTTFVDLVDGFVKE 316
N T+ L++G+ ++
Sbjct: 342 NTVTYNTLINGYSQQ 356
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 183 EDADEIFKKMK-ETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
++A+E+ +MK E +PNAV ++DG C+ G ++ A ++ M+E P +V
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+V G + H + A F M+ G+ N +Y L+ C S ++ A + +MLEAG
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
SP+ + L+ G + + +A + L E GF
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E+ +MKE + PN V ++ G+C+ + A+ F M ++G +V Y +
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + A + KM G SP+A Y L+ GLC+ R DA ++ E G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
S ++ + +++ G ++ AE + T +EK
Sbjct: 543 SLDLLAY-NMLIGLFCDKNNAEKVYEMLTDMEK 574
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 45/193 (23%)
Query: 186 DEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGT------------- 229
+++ KM E + P+ V + ++ LCK V EAL++F MR K T
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 230 -----------------------------IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQ 260
+P V Y +++GY +A K + AK + +M+
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 261 SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVA 320
+ I PN + +V G+C+ L A F ++M + G N+ T++ L+ V
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 321 EAKGAIRTLIEKG 333
+A ++E G
Sbjct: 494 KAMYWYEKMLEAG 506
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTA 238
E + + ++M+E GL P A++D C G + EALKLF M + P VIY
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ ++K A + +M+ + PN +Y L + L + ++ + + EM+E
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 299 HSPNMTTFVDLVD 311
PN T L++
Sbjct: 718 CEPNQITMEILME 730
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 183 EDADEIFKKMK-ETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
++A+E+ +MK E +PNAV ++DG C+ G ++ A ++ M+E P +V
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+V G + H + A F M+ G+ N +Y L+ C S ++ A + +MLEAG
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
SP+ + L+ G + + +A + L E GF
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E+ +MKE + PN V ++ G+C+ + A+ F M ++G +V Y +
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + A + KM G SP+A Y L+ GLC+ R DA ++ E G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
S ++ + +++ G ++ AE + T +EK
Sbjct: 543 SLDLLAY-NMLIGLFCDKNNAEKVYEMLTDMEK 574
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 45/193 (23%)
Query: 186 DEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGT------------- 229
+++ KM E + P+ V + ++ LCK V EAL++F MR K T
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 230 -----------------------------IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQ 260
+P V Y +++GY +A K + AK + +M+
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 261 SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVA 320
+ I PN + +V G+C+ L A F ++M + G N+ T++ L+ V
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 321 EAKGAIRTLIEKG 333
+A ++E G
Sbjct: 494 KAMYWYEKMLEAG 506
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ K+M E G+ PN ML G + G ++ A + F M+++ ++V YT VV
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ A + A+ +F +M G+ P+ +Y ++Q LCK +++A EM+ G+ P
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 302 NMTTFVDLVDGF 313
N+TT+ L+ G
Sbjct: 334 NVTTYNVLIRGL 345
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P+ A ++F M E G + + +LD LCK V++A +LF +R + ++ + V Y
Sbjct: 142 PDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNV 200
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ G+ + A + ++M GI+PN +Y +++G + +++ A+EF +EM +
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
++ T+ +V GF + A+ +I +G +
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +F +M G++P+ AM+ LCK V+ A+ +F M +G P + Y ++
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G A + + + ++M++ G PN +Y ++++ +CS ++ A +M P
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 302 NMTTFVDLVDG-FVKEQ 317
N+ T+ L+ G FV+++
Sbjct: 404 NLDTYNILISGMFVRKR 420
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
+A+KLF M E G ++ + +++ K+ + + A +FR ++ S + +Y V++
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVIL 202
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
G C R A E EM+E G +PN+TT+ ++ GF + G IR
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR-------AGQIR-------- 247
Query: 336 VNEKAVKGFLDMKK 349
A + FL+MKK
Sbjct: 248 ---HAWEFFLEMKK 258
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Query: 185 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E F +MK+ + ++ G G ++ A +F M +G +P + Y A+++
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K ++A +F +M G PN +Y VL++GL E M G P
Sbjct: 309 VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368
Query: 302 NMTTFVDLVDGFVKEQGVAEAKG 324
N T+ ++ + + V +A G
Sbjct: 369 NFQTYNMMIRYYSECSEVEKALG 391
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 217 ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 276
AL M+E G P ++ YT +++GY + + D AK +FR+M G PN F+Y +++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 277 GLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQG-VAEAKGAIRTLIEKGFV 335
GLC ++A EM G +PN + LV G++++ G ++EA+ I+ +++KG
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV-GYLRKAGKLSEARKVIKEMVKKGHY 826
Query: 336 VN 337
V+
Sbjct: 827 VH 828
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 185 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +++ KE GL+ + + ++ GLCK G ++E L++ MRE P++ YTA+++
Sbjct: 247 ALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIK 306
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
D + R++ +M+ + I P+ +Y LV GLCK R++ +E +EM
Sbjct: 307 TLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+ + L++GFV + V A L++ G++ +
Sbjct: 367 DREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIAD 402
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
++ +M+ + P+ +A ++ GLCKDG V+ +LF M+ K + + IY ++EG+
Sbjct: 320 VWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFV 379
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K A ++ + +G + Y +++GLC +++ A++ +E P+
Sbjct: 380 ADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFE 439
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGF 344
T ++ +V +++ + + E G+ V++ + F
Sbjct: 440 TLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFF 479
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ EI ++M+E P+ AM+ L +G + +L+++ MR P+++ Y +
Sbjct: 280 EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V G K + + +F +M+ I + Y VL++G +++ A +++++G+
Sbjct: 340 VVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY 399
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
++ + ++ G V +A + IE+
Sbjct: 400 IADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEE 432
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++ GLC G ++AL+L G+M G P+IV Y +++G+ K+++ + A +F+ ++S
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 264 I-SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
+ SP+ +YT ++ G CK ++++A +ML G P TF LVDG+ K
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + M G+ P V ++DG K G + A ++ G M G P++V +T+++
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY + + R++ +M + G+ PNAF+Y++L+ LC +RL A E ++
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P + ++DGF K V EA
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEA 436
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 185 ADEIFKKMKETGLI-PNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
A E+FK +K + P+ V +M+ G CK G ++EA L M G P V + +V
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY KA + A+ I KM S G P+ ++T L+ G C+ ++ F EM G
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
PN T+ L++ E + +A+ + L K +
Sbjct: 380 PNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
++++M G+ PNA +++ LC + + +A +L G + K IP+ +Y V++G+
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
KA K ++A I +M+ P+ ++T+L+ G C R+ +A +M+ G SP+
Sbjct: 429 KAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
T L+ +K G+A+ + + KG
Sbjct: 489 TVSSLLSCLLK-AGMAKEAYHLNQIARKG 516
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+EI KM G P+ V +++DG C+ G V + +L+ M +G P Y+ ++
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
++ A+ + ++ S I P F Y ++ G CK ++ +A EM + P
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ TF L+ G + + EA ++ G
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++ GLC G ++AL+L G+M G P+IV Y +++G+ K+++ + A +F+ ++S
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 264 I-SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
+ SP+ +YT ++ G CK ++++A +ML G P TF LVDG+ K
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + M G+ P V ++DG K G + A ++ G M G P++V +T+++
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY + + R++ +M + G+ PNAF+Y++L+ LC +RL A E ++
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
P + ++DGF K V EA
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEA 436
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 185 ADEIFKKMKETGLI-PNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
A E+FK +K + P+ V +M+ G CK G ++EA L M G P V + +V
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY KA + A+ I KM S G P+ ++T L+ G C+ ++ F EM G
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
PN T+ L++ E + +A+ + L K +
Sbjct: 380 PNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
++++M G+ PNA +++ LC + + +A +L G + K IP+ +Y V++G+
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
KA K ++A I +M+ P+ ++T+L+ G C R+ +A +M+ G SP+
Sbjct: 429 KAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
T L+ +K G+A+ + + KG
Sbjct: 489 TVSSLLSCLLK-AGMAKEAYHLNQIARKG 516
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+EI KM G P+ V +++DG C+ G V + +L+ M +G P Y+ ++
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
++ A+ + ++ S I P F Y ++ G CK ++ +A EM + P
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ TF L+ G + + EA ++ G
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A F KM G+ P ML G ++ AL+ F M+ +G P+ + ++
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ + K D+A+++F +M+ N I P+ SYT +++G R+ D EM +G P
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
N TT+ L+ G + EAK ++ ++ K
Sbjct: 359 NATTYSTLLPGLCDAGKMVEAKNILKNMMAK 389
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 202 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 261
V +++ K G+VQE++K+F M++ G I Y ++ + + + AKR F KM S
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 262 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
G+ P +Y +++ G RL+ A F +M G SP+ TF +++GF + + + E
Sbjct: 249 EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDE 308
Query: 322 AK 323
A+
Sbjct: 309 AE 310
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 178 QPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ + +++ +IF+KMK+ G+ I + ++ + + G A + F M +G P
Sbjct: 197 KAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRH 256
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
Y ++ G+ + + + A R F M++ GISP+ ++ ++ G C+ ++ +A + VEM
Sbjct: 257 TYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM 316
Query: 295 LEAGHSPNMTTFVDLVDGFV 314
P++ ++ ++ G++
Sbjct: 317 KGNKIGPSVVSYTTMIKGYL 336
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 192 MKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 248
MK GL P+ V +++D CKD +++A KL MRE+ P+++ YT V+ G +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 249 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
D A+ + ++M+ G P+ +Y ++ C RL DA + EM++ G SPN TT+
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++ KM+E P+ + ++ GL G +A ++ M+E G P++ Y A
Sbjct: 263 EKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAA 322
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + A + DA ++ +M G+SPNA +Y + + L + L ++E V ML
Sbjct: 323 IRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNEC 382
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN + + L+ F + + V A ++ KGF
Sbjct: 383 LPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
M+ KG P++V Y ++++ Y K + + A ++ KM+ +P+ +YT ++ GL +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKG 343
A E EM E G P++ + + F + + +A + +++KG N
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 344 FL 345
F
Sbjct: 357 FF 358
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 183 EDADEIFKKMK-ETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
++A+E+ +MK E PNAV ++DG C+ G ++ A ++ M+E P +V
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+V G + H + A F M+ G+ N +Y L+ C S ++ A + +MLEAG
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
SP+ + L+ G + + +A + L E GF
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E+ +MKE + PN V ++ G+C+ + A+ F M ++G +V Y +
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + A + KM G SP+A Y L+ GLC+ R DA ++ E G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 300 SPNMTTFVDLVDGF 313
S ++ + L+ F
Sbjct: 543 SLDLLAYNMLIGLF 556
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 186 DEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVI------Y 236
+++ KM E + P+ V + ++ LCK V EAL++F MR K T VI +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQ-SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 295
+++G K + +A+ + +M+ +PNA +Y L+ G C+ +L+ A E M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 296 EAGHSPNMTTFVDLVDGFVKEQGVAEA 322
E PN+ T +V G + G+ A
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTA 238
E + + ++M+E GL P A++D C G + EALKLF M + P VIY
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ ++K A + +M+ + PN +Y L + L + ++ + + EM+E
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 299 HSPNMTTFVDLVD 311
PN T L++
Sbjct: 718 CEPNQITMEILME 730
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +M G P+AV+ ++ +C+ GLV+E +L P + +Y A++
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALIN 254
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K H A + R+M GISPN SY+ L+ LC +++ AF F +ML+ G P
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 302 NMTTFVDLVDG 312
N+ T LV G
Sbjct: 315 NIYTLSSLVKG 325
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 42/191 (21%)
Query: 184 DADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
DA +++ +M + GL PN VA ++ G C G + +A+ +F M E G P I Y ++
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM----- 294
+ G+ K D A I+ KM ++G PN YT +V+ LC+ S+ ++A E +E+
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA-ESLIEIMSKEN 452
Query: 295 ------------------------------LEAGHS--PNMTTFVDLVDGFVKEQGVAEA 322
+E H PN+ T+ +L+DG K + EA
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Query: 323 KGAIRTLIEKG 333
G R + +G
Sbjct: 513 YGLTREIFMRG 523
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q + E A E+F ++KE G P+ +LD L + +Q ++ M+ G P +
Sbjct: 123 QVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVF 182
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
Y +++ K +K D AK++ +M + G P+A SYT ++ +C+ +++ E
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE----- 237
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
L P ++ + L++G KE A +R ++EKG
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGI 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A I+ KM +G PN V M++ LC+ +EA L +M ++ P + + A ++
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 242 GYTKAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G A + D A+++FR+M Q + PN +Y L+ GL K +R+++A+ E+ G
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 301 PNMTTFVDLVDG 312
+ +T+ L+ G
Sbjct: 526 WSSSTYNTLLHG 537
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 123/307 (40%), Gaps = 37/307 (12%)
Query: 46 LMGESDDVSIHKLDPHFSDSSREGSEP------IPNRALRGTQPVNPHSREYNRGSRSSR 99
L+GE+ I+ + + D R+G EP + +AL V+ G++
Sbjct: 156 LLGENRIQMIYMV---YRDMKRDGFEPNVFTYNVLLKALCKNNKVD--------GAKKLL 204
Query: 100 PRFDGNRGRPDDVEMTNK-SSQTDIGF--QGRNMSDTNKVVNKLGDSFLDKFKLGFDNKA 156
PD V T SS ++G +GR +++ + V + ++ ++ D K
Sbjct: 205 VEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKG 264
Query: 157 GNS--SEVAASNLSEEAKS--------ANSNQPAMPEDADEIFKKMKETGLIPNAV---A 203
E+ +S S NS Q E A +M + G PN +
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQI---ELAFSFLTQMLKRGCHPNIYTLSS 321
Query: 204 MLDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++ G G +AL L+ ++R G P +V Y +V+G+ A +F M+
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G SPN +Y L+ G K L A +ML +G PN+ + ++V+ + EA
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 323 KGAIRTL 329
+ I +
Sbjct: 442 ESLIEIM 448
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A+++GLCK+ + A +L M EKG P ++ Y+ ++ + + + A +M
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-GHSPNMTTFVDLVDGFVKEQGVAE 321
G PN ++ + LV+G DA + +M+ G PN+ + LV GF + +
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 322 AKGAIRTLIEKG 333
A + E G
Sbjct: 371 AVSVFSHMEEIG 382
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIP-EIVIYTAVVE 241
E EI K +P A + GLC G + A K+F M ++ P IV Y +++
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G KA++ ++A + R++ G+ ++ +Y L+ G C A + +M+ G SP
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ T ++ + K QG AE + L+ G
Sbjct: 562 DEITMNMIILAYCK-QGKAERAAQMLDLVSCG 592
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+L G C GL AL+L G M G P+ + ++ Y K KA+ A ++ + S
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSC 591
Query: 263 G---ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFV 314
G P+ SYT ++ GLC+ + +D M+ AG P++ T+ L++ F+
Sbjct: 592 GRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 38/202 (18%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A + K MKE GL P+A + ++ C++G + A++ M G +P+IV Y V
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 240 VEGYTKAHKADDAKRIFRK-----------------------------------MQSNGI 264
+ K KAD A IF K M SNGI
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
P+ +Y ++ LC+ + +AFE V+M P++ T+ ++ GF K + +A
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 325 AIRTLIEKGFVVNEKAVKGFLD 346
+ +++ G NE ++
Sbjct: 530 VLESMVGNGCRPNETTYTVLIE 551
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 168 SEEAKSANSNQPAMPEDADEI-----FKKMKETGLIPNAV---AMLDGLCKDGLVQEALK 219
S + S N+ A+ D+I +M G+ P+ + +M+ LC++G+V EA +
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 220 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 278
L MR P +V Y V+ G+ KAH+ +DA + M NG PN +YTVL++G+
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 185 ADEIFKKMKET---GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
DE K M E GL P+ ++ G+CK+G+V A ++ + KG P+++ Y
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ K ++ +++ KM S PN +Y++L+ LC+ ++++A M E G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF---VVNEKAVKGFL 345
+P+ ++ L+ F +E + A + T+I G +VN V L
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ +++ KM PN V ++ LC+DG ++EA+ L LM+EKG P+ Y +
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + + + D A M S+G P+ +Y ++ LCK + A E ++ E G
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 300 SPNMTTF 306
SPN +++
Sbjct: 435 SPNSSSY 441
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
V E L+ FG P++ Y A++ G+ K ++ DDA R+ +M+S SP+ +Y +
Sbjct: 146 VMEILEKFGQ-------PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ LC +L A + ++L P + T+ L++ + E GV EA + ++ +G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 334 F 334
Sbjct: 259 L 259
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A EIF K+ E G PN+ + M L G AL + M G P+ + Y ++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + D+A + M+S P+ +Y +++ G CK R++DA M+ G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 300 SPNMTTFVDLVDGF 313
PN TT+ L++G
Sbjct: 540 RPNETTYTVLIEGI 553
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA + +M+ P+ V M+ LC G + ALK+ + P ++ YT +
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+E D+A ++ +M S G+ P+ F+Y +++G+CK + AFE + G
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 300 SPNMTTFVDLVDGFVKE 316
P++ ++ L+ + +
Sbjct: 295 EPDVISYNILLRALLNQ 311
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A+++G CK + +A ++ MR K P+ V Y ++ K D A ++ ++ S+
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
P +YT+L++ + +A + EML G P+M T+ ++ G KE V A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 323 KGAIRTLIEKG 333
+R L KG
Sbjct: 283 FEMVRNLELKG 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 211 DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFS 270
+G V EALKL M +G P++ Y ++ G K D A + R ++ G P+ S
Sbjct: 241 EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300
Query: 271 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
Y +L++ L + ++ + +M PN+ T+ L+ ++ + EA ++ +
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 331 EKGF 334
EKG
Sbjct: 361 EKGL 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ M + A E+ + ++ G P+ ++ +L L G +E KL M + P +V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
Y+ ++ + K ++A + + M+ G++P+A+SY L+ C+ RL A EF M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 295 LEAGHSPNMTTF 306
+ G P++ +
Sbjct: 395 ISDGCLPDIVNY 406
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 189 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
F +M G+ P+ V ++D CK G A ++F M +G +P Y ++ Y
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 526
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
+ DD KR+ KM+S GI PN ++T LV K R DA E EM G P+ T
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 586
Query: 306 FVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ L++ + + +A A R + G
Sbjct: 587 YNALINAYAQRGLSEQAVNAFRVMTSDGL 615
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D + KMK G++PN V ++D K G +A++ M+ G P +Y A+
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 590
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y + ++ A FR M S+G+ P+ + L+ + R +AF M E G
Sbjct: 591 INAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 650
Query: 300 SPNMTTFVDLVDGFVK 315
P++ T+ L+ ++
Sbjct: 651 KPDVVTYTTLMKALIR 666
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 182 PEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P A ++ + TGL V+++ L G EA LF +R+ G P Y A
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++GY K DA+ + +M+ G+SP+ +Y++L+ R + A EM
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 299 HSPNMTTFVDLVDGF 313
PN F L+ GF
Sbjct: 405 VQPNSFVFSRLLAGF 419
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+E+F+ M+ G +P A M++ + +L G M+ +G +P +V +T +V+
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
Y K+ + +DA +M+S G+ P++ Y L+ + + A M G P
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
++ L++ F +++ AEA ++ + E G
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++ G K G +AL+L G+ + G + +++ + + +A+ +F +++ +G
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
I P +Y L++G K L+DA EM + G SP+ T+ L+D +V A+
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 324 GAIRTL----IEKGFVVNEKAVKGFLD 346
++ + ++ V + + GF D
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRD 421
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A + K+M+ + PN+ +L G G Q+ ++ M+ G P+ Y V
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + K + D A F +M S GI P+ ++ L+ CK R A E M G
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
P TT+ +++ + ++ + K + + +G + N
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 187 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
++ K+MK G+ P+ ++D K + A+ F M +G P+ V + +++ +
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K + A+ +F M+ G P A +Y +++ R D +M G PN+
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 304 TTFVDLVDGFVK 315
T LVD + K
Sbjct: 550 VTHTTLVDVYGK 561
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 39/193 (20%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI---- 230
Q +DA ++F +M+ +G P++VA +LDG CK G + EA +L L + G +
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 231 -------------------------------PEIVIYTAVVEGYTKAHKADDAKRIFRKM 259
P+I++YT +++G +KA K +DA ++ M
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 260 QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGV 319
S GISP+ + Y +++ LC L++ +EM E P+ T L+ + V
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 320 AEAKGAIRTLIEK 332
EA+ I T IEK
Sbjct: 425 REAE-EIFTEIEK 436
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +M + PN ++DGL K G +A K+F M +G P V YT ++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G + ADDA+++F +MQ++G P++ ++ L+ G CK R+ +AFE + G
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
+ + L+DG + + +A
Sbjct: 302 GLRGYSSLIDGLFRARRYTQA 322
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNA----VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
M E A E F +MKE P+ V + + ++ A ++ M + P + +
Sbjct: 142 MAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTF 201
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
+++G K + DA+++F M GISPN +YT+L+ GLC+ DA + EM
Sbjct: 202 GILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQT 261
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+G+ P+ L+DGF K + EA +R + GFV+ + +D
Sbjct: 262 SGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA ++F M G+ PN V ++ GLC+ G +A KLF M+ G P+ V + A++
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G+ K + +A + R + +G Y+ L+ GL + R AFE ML+
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK 335
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P++ + L+ G K + +A + ++ KG
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E++ M + + P+ + ++ GL K G +++ALKL M KG P+ Y AV++
Sbjct: 322 AFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIK 381
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
++ + + +M P+A ++T+L+ +C+ +++A E E+ ++G SP
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSP 441
Query: 302 NMTTFVDLVDGFVKEQGVAEAK 323
++ TF L+DG K + EA+
Sbjct: 442 SVATFNALIDGLCKSGELKEAR 463
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 42/163 (25%)
Query: 181 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEA----------------LKL- 220
+ +A+EIF +++++G P+ A++DGLCK G ++EA L+L
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLS 482
Query: 221 ------FGLMREKGTI----------------PEIVIYTAVVEGYTKAHKADDAKRIFRK 258
F M E G+I P+IV Y ++ G+ +A D A ++
Sbjct: 483 HSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNV 542
Query: 259 MQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+Q G+SP++ +Y L+ GL + R ++AF+ + HSP
Sbjct: 543 LQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP 585
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 42/175 (24%)
Query: 181 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+ E+ + +M ET P+A ++ +C++GLV+EA ++F + + G P + +
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 238 AVVEGYTKAHKADDAKRIFRKMQ------------------------------------- 260
A+++G K+ + +A+ + KM+
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAH 507
Query: 261 --SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF 313
G SP+ SY VL+ G C+ + A + + G SP+ T+ L++G
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLF-GLMREKGTIPEIVIYTA 238
++A ++ +M + N V +++GLCK G +A ++ L++EK Y +
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS 595
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++G+ K D A +R+M NG SPN ++T L+ G CK +R+ A E EM
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV----VNEKAVKGFLDMKK 349
++ + L+DGF K+ + A L E G + V + GF ++ K
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 182 PEDADEIFKKMKET----GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
PE A EIF E+ G + N + +L CK G V A +M +KG P +V Y
Sbjct: 431 PEAALEIFNDSFESWIAHGFMCNKIFLL--FCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++ + + D A+ IF +M G+ PN F+Y++L+ G K Q+A++ +M +
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS 548
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLI-EKGFVVNEKAVKGFLD 346
N + +++G K ++AK ++ LI EK + ++ + +D
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIID 598
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 185 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ +MK L +P A++DG CK ++ A LF + E G +P + +Y +++
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ K D A +++KM ++GIS + F+YT ++ GL K + A + E+L+ G P
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
+ + LV+G K+ +A + + +K
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A E +++M E G PN V ++++G CK + AL++ M+ ++ Y A+
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ K + A +F ++ G+ PN Y L+ G ++ A + +M+ G
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
S ++ T+ ++DG +K+ + A L++ G V +E
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 185 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +++KKM G+ + M+DGL KDG + A L+ + + G +P+ +++ +V
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +K + A ++ +M+ ++PN Y+ ++ G + L +AF EMLE G
Sbjct: 774 GLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVH 833
Query: 302 NMTTFVDLVDGFVKE 316
+ T F LV G V++
Sbjct: 834 DDTVFNLLVSGRVEK 848
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 76/191 (39%), Gaps = 37/191 (19%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F +M+E GL P+ V M++ CK+ +++A++ + M+ P V+ +++
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 242 GYTKAH----------------------------------KADDAKRIFRKMQSNGISPN 267
G KA K D A + M+ GI PN
Sbjct: 424 GCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 268 AFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIR 327
Y ++ C+ + A EMLE G PN T+ L+DGF K + A I
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 328 TLIEKGFVVNE 338
+ F NE
Sbjct: 544 QMNASNFEANE 554
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 162 VAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEAL 218
VA N++ + S + PE+A +IF+++ G P+ + + CK + AL
Sbjct: 235 VAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMAL 294
Query: 219 KLFGLMREKGTIPEIV-IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG 277
L MR K +P YT+V+ + K ++A R+ +M GI + + T LV G
Sbjct: 295 DLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNG 354
Query: 278 LCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
CK + L A + M E G +P+ F +V+ F K + +A
Sbjct: 355 YCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 4/186 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +F ++ E GL+PN +++ G G + A+ L+ M G ++ YT +++
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K + A ++ ++ GI P+ + VLV GL K + A + EM + +P
Sbjct: 739 GLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSVWEAIFG 361
N+ + ++ G +E + EA ++EKG +V++ V L + P I
Sbjct: 799 NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG-IVHDDTVFNLLVSGRVEKPPAASKISS 857
Query: 362 KKAPQM 367
+P+M
Sbjct: 858 LASPEM 863
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++ K+G ++EA+++ M G ++ T++V GY K ++ A +F +M+
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK----EQG 318
G++P+ ++V+V+ CK ++ A EF + M +P+ ++ G +K E
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAA 434
Query: 319 VAEAKGAIRTLIEKGFVVNE 338
+ + + I GF+ N+
Sbjct: 435 LEIFNDSFESWIAHGFMCNK 454
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 39/216 (18%)
Query: 183 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A + +M G+ + A ++++G CK + +AL LF M E+G P+ V+++ +
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVM 386
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR-------LQDAFE--- 289
VE + K + + A + +M+S I+P++ ++QG K D+FE
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI 446
Query: 290 ------------FC-----------VEMLEA-GHSPNMTTFVDLVDGFVKEQGVAEAKGA 325
FC ++M+E G PN+ + +++ + + + A+
Sbjct: 447 AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSI 506
Query: 326 IRTLIEKGFVVNEKAVKGFLD--MKKPFSPSVWEAI 359
++EKG N +D K + W+ I
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 193 KETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDA 252
K +P +L L + L+ EA +++ M G + V ++ + K ++A
Sbjct: 199 KVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEA 258
Query: 253 KRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGHSPNMTTFVDLVD 311
+IFR++ S G P+ +++ VQ CK L A + EM + G + T+ ++
Sbjct: 259 VKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIV 318
Query: 312 GFVKEQGVAEA 322
FVKE + EA
Sbjct: 319 AFVKEGNMEEA 329
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCK---DGLVQEALKLFGLMREKGTIPEIVIYTA 238
A ++ + MK G PN V+ ++DG CK +G + +A + M E P + +
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++G+ K + ++F++M + PN SY L+ GLC ++ +A +M+ AG
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEA 322
PN+ T+ L++GF K + EA
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEA 385
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
++FK+M + + PN ++ +++GLC G + EA+ + M G P ++ Y A++ G+
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K +A +F ++ G P Y +L+ CK ++ D F EM G P++
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
T+ L+ G + + AK L KG
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 87/159 (54%), Gaps = 5/159 (3%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D + ++M+ G++P+ ++ GLC++G ++ A KLF + KG +P++V + +
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHIL 476
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM-LEAG 298
+EGY + ++ A + ++M G+ P +Y ++++G CK L+ A +M E
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
N+ ++ L+ G+ ++ + +A + ++EKG V N
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
AD + K+M E + PN ++DG KD + ++K+F M ++ P ++ Y +++
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K +A + KM S G+ PN +Y L+ G CK L++A + + G P
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 302 NMTTFVDLVDGFVK 315
+ L+D + K
Sbjct: 400 TTRMYNMLIDAYCK 413
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 181 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
M ++A ++F +K G +P ++D CK G + + L M +G +P++ Y
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++ G + + AK++F ++ S G+ P+ ++ +L++G C+ + A EM +
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
G P T+ ++ G+ KE G +A +RT +EK
Sbjct: 500 GLKPRHLTYNIVMKGYCKE-GNLKAATNMRTQMEK 533
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKL-------FGLMREK-------GTIPEIVIYTAVVEGY 243
I +A++M D +C + ++ + L L F L E G + ++
Sbjct: 139 IFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIAL 198
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K +++ D + ++++M I PN F++ V++ LCK ++ A + +M G SPN+
Sbjct: 199 LKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNV 258
Query: 304 TTFVDLVDGFVKEQG---VAEAKGAIRTLIE 331
++ L+DG+ K G + +A ++ ++E
Sbjct: 259 VSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 187 EIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E ++KM GL P+ V +++G CK+G + A + M +G P+ + YT +++G+
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ + A I ++M NGI + ++ LV G+CK R+ DA EML AG P+
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 304 TTFVDLVDGFVKE 316
T+ ++D F K+
Sbjct: 486 VTYTMMMDAFCKK 498
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +F +M + GLIPN V ++ G ++G + + + M KG P+IV+Y +V
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ K A+ I M G+ P+ +YT L+ G C+ ++ A E EM + G
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ F LV G KE V +A+ A+R ++ G
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A I M GL P+ + ++DG C+ G V+ AL++ M + G + V ++A+V
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K + DA+R R+M GI P+ +YT+++ CK Q F+ EM GH P
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
++ T+ L++G K + A + ++ G V ++ L+
Sbjct: 519 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA ++F ++ + L P V+ +++G CK G + E +L M + T P++ Y+A++
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
K +K D A +F +M G+ PN +T L+ G + + E +ML G
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
P++ + LV+GF K + A+ + +I +G
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A+++ LCK+ + A LF M ++G IP VI+T ++ G+++ + D K ++KM S
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G+ P+ Y LV G CK L A M+ G P+ T+ L+DGF + V A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A EI K+M + G+ + V A++ G+CK+G V +A + M G P+ V YT +
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++ + K A ++ ++MQS+G P+ +Y VL+ GLCK ++++A ML G
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551
Query: 300 SPNMTTFVDLVDG 312
P+ T+ L++G
Sbjct: 552 VPDDITYNTLLEG 564
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+++ CK+G + +A K+F + ++ P +V + ++ GY K D+ R+ +M+ +
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
P+ F+Y+ L+ LCK +++ A EM + G PN F L+ G + + K
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 324 GAIRTLIEKGF----VVNEKAVKGF 344
+ + ++ KG V+ V GF
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGF 390
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 51/106 (48%)
Query: 233 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 292
+ ++ ++ + K DA+++F ++ + P S+ L+ G CK L + F
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 293 EMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
+M ++ P++ T+ L++ KE + A G + ++G + N+
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
+ ++ +L LCK +++A+++ LM G IP+ YT +V K A ++
Sbjct: 106 VAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVE 165
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQ 317
KM+ +G N +Y LV+GLC L + +F +++ G +PN T+ L++ KE+
Sbjct: 166 KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKER 225
Query: 318 GVAEAKGAIRTLIEKG 333
G EA + +I KG
Sbjct: 226 GTDEAVKLLDEIIVKG 241
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + + M +G+IP+A A +++ LCK G V A++L M + G V Y A+V
Sbjct: 125 AIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVR 184
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G + + + ++ G++PNAF+Y+ L++ K +A + E++ G P
Sbjct: 185 GLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP 244
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
N+ ++ L+ GF KE +A R L KGF N
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+ +++ + GL PNA +L+ K+ EA+KL + KG P +V Y ++ G+
Sbjct: 197 QFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGF 256
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K + DDA +FR++ + G N SY +L++ LC R ++A EM +P++
Sbjct: 257 CKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSV 316
Query: 304 TTFVDLVDGF 313
T+ L++
Sbjct: 317 VTYNILINSL 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +KM++ G N V A++ GLC G + ++L+ + +KG P Y+ ++E
Sbjct: 160 AMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLE 219
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K D+A ++ ++ G PN SY VL+ G CK R DA E+ G
Sbjct: 220 AAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
Query: 302 NMTTFVDLV-----DGFVKEQG--VAEAKGAIR--TLIEKGFVVNEKAVKG 343
N+ ++ L+ DG +E +AE G R +++ ++N A G
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHG 330
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 228 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 287
G P + T ++ KA++ A R+ M S+GI P+A +YT LV LCK + A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 288 FEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+ +M + G+ N T+ LV G + ++ + L++KG N
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPN 210
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQ-S 261
+++ LC+ G A +L M G P+ Y+A++ G A + M+ S
Sbjct: 428 SVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEES 487
Query: 262 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
P ++ ++ GLCK R A E M+E PN TT+ LV+G E +
Sbjct: 488 ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELEL 547
Query: 322 AKGAIRTL 329
AK + L
Sbjct: 548 AKEVLDEL 555
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+PE A+ F ++KE G P+ +M+ + +V +A + M+E+G P + Y
Sbjct: 610 LPE-AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+++ ++++ ++ I R++ + GI P+ SY ++ C+ +R++DA EM +
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
G P++ T+ + + + EA G +R +I+ G N+ +D
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD 777
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 182 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P++A ++ +M G P+ V +++ +DG++ EA++L M EKGT P++ YT
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ G+ +A K + A IF +M++ G PN ++ ++ + + + E+ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
SP++ T+ L+ F + +E G + + GFV
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 188 IFKKMKETGLIPNAVAM--LDGLCKDG-LVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ +KMK G+ P+A L CK G L QEA ++F M+ G + V Y A+++ Y
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K+H+ +A ++ +M NG SP+ +Y L+ + L +A E +M E G P++
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
T+ L+ GF + V A + G N F+ M
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 181 MPEDADEIFKKMKETGLIP-----NAVAMLDGLCKD-GLVQEALKLFGLMREKGTIPEIV 234
M A+ + MKE G P N++ + D G +E L+ + KG P+I+
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE---ILAKGIKPDII 700
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
Y V+ Y + + DA RIF +M+++GI P+ +Y + S ++A M
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
++ G PN T+ +VDG+ K EAK + L
Sbjct: 761 IKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++++M + G+ P+ +L L + G+ +++ K+ M + P + Y ++
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y + + ++ S I P A LV KC L +A E+ E G
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
SP++TT +V + + Q VA+A G + + E+GF
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+IF ++ GL P+ V +L ++G+ E +F M+ G +PE + ++ Y
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
++ + A ++R+M G++P+ +Y ++ L + + + + EM + PN
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF--VVNEKAV 341
T+ L+ + + + G + +L E+ + V+ +AV
Sbjct: 560 LTYCSLLHAYANGKEI----GLMHSLAEEVYSGVIEPRAV 595
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A IF++M+ G PN A + G E +K+F + G P+IV + +
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + + + +F++M+ G P ++ L+ +C + A ML+AG
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+P+++T+ ++ + G+ E + +E G
Sbjct: 521 TPDLSTYNTVLAALAR-GGMWEQSEKVLAEMEDG 553
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 186 DEIFKKMKETGLIPNAVA--MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
D K+ ++ N+V ++ L K+G V A +F ++E G ++ YT+++ +
Sbjct: 159 DWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAF 218
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-GHSPN 302
+ + +A +F+KM+ +G P +Y V++ K + VE +++ G +P+
Sbjct: 219 ANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPD 278
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
T+ L+ + EA + GF ++ LD+
Sbjct: 279 AYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++D +C ++EA+ L + G P+ +Y +++G+ K +A +++KM+ G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
+ P+ +Y L+ GL K R+++A + M++AG+ P+ T+ L++G ++ E+
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK---GESL 352
Query: 324 GAIRTLIE 331
GA+ L E
Sbjct: 353 GALSLLEE 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A ++KKMKE G+ P+ + ++ GL K G V+EA M + G P+ YT+++
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G + ++ A + +M++ G +PN +Y L+ GLCK + E M +G
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Query: 301 PNMTTFVDLVDGFVKEQGVAEA 322
+ LV VK VAEA
Sbjct: 403 LESNGYATLVRSLVKSGKVAEA 424
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + K+ G P+ ++ G C EA+ ++ M+E+G P+ + Y ++
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G +KA + ++A+ + M G P+ +YT L+ G+C+ A EM G +
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA 367
Query: 301 PNMTTFVDLVDGFVKEQ 317
PN T+ L+ G K +
Sbjct: 368 PNDCTYNTLLHGLCKAR 384
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTA 238
++A ++ K++ E P+ +L LCK + + MR+ + P++V +T
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++ + +A + K+ + G P+ F Y +++G C S+ +A +M E G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
P+ T+ L+ G K V EA+ ++T+++ G+
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 20/233 (8%)
Query: 125 FQGRNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNS-SEVAASNLSEEAKSANSNQPAMPE 183
F+ N+SD + N + + L F N S +A N + K + P
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVN--DTVKLFQHILKSQPN 117
Query: 184 DADEIFKKMKETGLIPNAVAMLDGLCK--DGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
F+ + T LI +L C+ D + ++ LM G P+ V V
Sbjct: 118 -----FRPGRSTFLI-----LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVR 167
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGHS 300
+ + D+AK + +++ P+ ++Y L++ LCKC L +EF EM +
Sbjct: 168 SLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK 227
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGFLDMKK 349
P++ +F L+D + + EA + L GF + +KGF + K
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 183 EDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A K M + G P+ ++++G+C+ G AL L M +G P Y +
Sbjct: 317 EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 376
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 289
+ G KA D ++ M+S+G+ + Y LV+ L K ++ +A+E
Sbjct: 377 LHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYE 426
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 8/184 (4%)
Query: 157 GNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGL 213
G V+ S L E A++ + A +F++M++ G++ N V +++ ++G
Sbjct: 321 GFCDVVSYSTLIETFCRASNTRKAY-----RLFEEMRQKGMVMNVVTYTSLIKAFLREGN 375
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
A KL M E G P+ + YT +++ K+ D A +F M + I+P+A SY
Sbjct: 376 SSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNS 435
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
L+ GLC+ R+ +A + +M P+ TF ++ G ++ + ++ A +++KG
Sbjct: 436 LISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Query: 334 FVVN 337
F ++
Sbjct: 496 FTLD 499
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 186 DEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
D + M+ G IP+ A LD LC++ V A++ F M ++G P++V YT ++ G
Sbjct: 99 DALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILING 158
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
+A K DA I+ M +G+SP+ + LV GLC ++ A+E E +++
Sbjct: 159 LFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKL 218
Query: 303 MTTFVD-LVDGFVKEQGVAEAKGAIRTLIEK 332
T + L+ GF K G E A+++ + K
Sbjct: 219 STVVYNALISGFCK-AGRIEKAEALKSYMSK 248
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 22/189 (11%)
Query: 161 EVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKL 220
++A ++EE KSA ++K + ++ NA ++ G CK G +++A L
Sbjct: 201 DLAYEMVAEEIKSA----------------RVKLSTVVYNA--LISGFCKAGRIEKAEAL 242
Query: 221 FGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK 280
M + G P++V Y ++ Y + A+ + +M +GI +A+SY L++ C+
Sbjct: 243 KSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Query: 281 CSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN--- 337
S + F V+ +E ++ ++ L++ F + +A + +KG V+N
Sbjct: 303 VSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 338 -EKAVKGFL 345
+K FL
Sbjct: 363 YTSLIKAFL 371
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 181 MPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLM---REKGTIPEIVIYT 237
M + A+ + +M +G+ +A + L + V K + M E ++V Y+
Sbjct: 270 MLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYS 329
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++E + +A A R+F +M+ G+ N +YT L++ + A + +M E
Sbjct: 330 TLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
G SP+ + ++D K V +A G +IE
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+ +F++M G +P+ V ++DG CK + AL+LF M+ KG +P V Y + +
Sbjct: 266 EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
Query: 241 EGYTKAHKADDAKRIFRKMQSNGIS-PNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
Y+ ++ + A + R M+ G P + +YT L+ L + R +A + VEM+EAG
Sbjct: 326 RYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL 385
Query: 300 SPNMTTFVDLVDGFVKE 316
P T+ + D E
Sbjct: 386 VPREYTYKLVCDALSSE 402
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
+ EA ++F M +G +P++V Y +++G K ++ A +F M++ G PN +Y
Sbjct: 264 MWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNS 323
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHS-PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
++ + ++ A E M + GH P +T+ L+ V+ + AEA+ + ++E
Sbjct: 324 FIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEA 383
Query: 333 GFVVNEKAVKGFLD 346
G V E K D
Sbjct: 384 GLVPREYTYKLVCD 397
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++ L ++G V+EAL F M+E P++ Y ++ + A+ + +MQ
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLP 229
Query: 263 GIS--PNAFSYTVLVQGLCK------C-----SRLQDAFEFCVEMLEAGHSPNMTTFVDL 309
G P+ ++YT+L+ C+ C R+ +A EML G P++ T+ L
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCL 289
Query: 310 VDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
+DG K + A + KG V N+ F+
Sbjct: 290 IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 184 DADEIFK---KMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
D DE + M+ G P V ++L LC+DG ++EA +L M K P+ +
Sbjct: 322 DIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCN 381
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++ Y K A ++ +KM +G+ + +SY L+ G CK L++A E M+E
Sbjct: 382 TLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEK 441
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
G SP T+ LVDGF + E + ++G + +G +
Sbjct: 442 GFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 178 QPAMPEDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ M D+ +F++++ GL P+ +L+ L K L K+F M + G + I
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIH 204
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+Y +V +K+ + A+++ +M+ G+ P+ F+Y L+ CK S +A M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
+G +PN+ T+ + GF +E + EA R +
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ +M +A + +M+ +G+ PN V + + G ++G ++EA +LF +++ T V
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANH-V 308
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
YT +++GY + + D+A R+ M+S G SP +Y +++ LC+ R+++A EM
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
P+ T L++ + K + + A + +IE G ++ + K +
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 184 DADEIFKKMKE--TGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
+A +F+++K+ T ++DG C+ + EAL+L +M +G P +V Y +++
Sbjct: 291 EATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ + +A R+ +M I P+ + L+ CK + A + +M+E+G
Sbjct: 351 KLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL 410
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+M ++ L+ GF K + AK + ++IEKGF
Sbjct: 411 DMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 136 VVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKET 195
V +L D+ FK K G + + N+ A S + + PE A+++ +M+E
Sbjct: 179 VKQRLTDTVWKIFKKMV--KLGVVANIHVYNVLVHACSKSGD----PEKAEKLLSEMEEK 232
Query: 196 GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDA 252
G+ P+ ++ CK + EAL + M G P IV Y + + G+++ + +A
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 253 KRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDG 312
R+FR+++ + ++ N +YT L+ G C+ + + +A M G SP + T+ ++
Sbjct: 293 TRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRK 351
Query: 313 FVKEQGVAEA 322
++ + EA
Sbjct: 352 LCEDGRIREA 361
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 3/163 (1%)
Query: 185 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ KKM E+GL + + A++ G CK ++ A + M EKG P Y+ +V+
Sbjct: 396 AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVD 455
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ +K D+ ++ + + G+ + Y L++ +CK ++ A M + G
Sbjct: 456 GFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVG 515
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGF 344
+ F + + + V EA + + +VN K K
Sbjct: 516 DSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 182 PEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
PED +F + +I A K G++ +++ +F +R G P + T ++
Sbjct: 129 PEDVSHVFSWL----MIYYA--------KAGMINDSIVVFEQIRSCGLKPHLQACTVLLN 176
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K D +IF+KM G+ N Y VLV K + A + EM E G P
Sbjct: 177 SLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFP 236
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
++ T+ L+ + K+ EA
Sbjct: 237 DIFTYNTLISVYCKKSMHFEA 257
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++ +EI M +T P + +++GLCK L+ A+ F M E+ +P+IV Y V
Sbjct: 331 DEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTV 390
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ +K DDA + +++ P +Y ++ GL K ++ A E +ML+AG
Sbjct: 391 LGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI 450
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P+ T L+ GF + V EA ++ +G
Sbjct: 451 FPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 177 NQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEI 233
++ M +DA E+ +K T P + +++DGL K GL+++AL+L+ M + G P+
Sbjct: 395 SKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDD 454
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
+ +++ G+ +A+ ++A ++ ++ + G +Y +++QGLCK ++ A E
Sbjct: 455 ITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEI 514
Query: 294 MLEAGHSPNMTTFVDLVDGFVKEQGVA 320
ML G P+ T + +V G V+E G+
Sbjct: 515 MLTGGCKPDETIYTAIVKG-VEEMGMG 540
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 5/175 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
I + M +G +P+ + ++ LCK G ++ AL L M G+ P+++ Y V+
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
A+ A R ++ NG P +YTVLV+ +C+ A E +M G P++
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSVWEAI 359
T+ LV+ + + E I+ ++ G +N L S W+ +
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL--HSLCSHEYWDEV 333
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 7/170 (4%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + F +M E +P+ V +L + K+G+V +A++L GL++ P ++ Y +V++
Sbjct: 368 AIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K A ++ +M GI P+ + L+ G C+ + +++A + E G+
Sbjct: 428 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 487
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGFLDM 347
+T+ ++ G K++ + A + ++ G + VKG +M
Sbjct: 488 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEM 537
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ + M G P+ V ++++ C+ G ++E + + G V Y ++
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
D+ + I M P +Y +L+ GLCK L A +F +MLE P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
++ T+ ++ KE V +A
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDA 403
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ +++ K+M E+G P+ ++ +++GL + G + +++++F ++ KG +P+ +Y A+
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + A D++ R +R+M PN +Y+ LV GL K ++ DA E EML G
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Query: 300 SPNMTTFVDLVDGFVK 315
P LV F+K
Sbjct: 392 LPT----TGLVTSFLK 403
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
M+ G K G V+E K+ M E G P+ + Y+ ++EG + + +D+ IF ++ G
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
P+A Y ++ ++ + ML+ PN+ T+ LV G +K + V++A
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 324 GAIRTLIEKGFVVNEKAVKGFLDMKKPFSP 353
++ +G + V FL + P
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGP 410
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 155 KAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLV 214
K G +V + E N N P + +++ KK K + + ++L C+ G
Sbjct: 319 KHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVS-SILQCYCQMGNF 377
Query: 215 QEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVL 274
EA LF RE + V Y + K K ++A +FR+M GI+P+ +YT L
Sbjct: 378 SEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTL 437
Query: 275 VQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG- 333
+ G C + DAF+ +EM G +P++ + L G EA ++ + +G
Sbjct: 438 IGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGV 497
Query: 334 ---FVVNEKAVKGFLD 346
+V + ++G +D
Sbjct: 498 KPTYVTHNMVIEGLID 513
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 184 DADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A ++FK+ +ET + + V D L K G V+EA++LF M KG P+++ YT ++
Sbjct: 379 EAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G K DA + +M G +P+ Y VL GL Q+AFE M G
Sbjct: 439 GGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVK 498
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTL----------IEKGFVVN---EKAVKGFLDM 347
P T +++G + + +A+ +L + KGF + A + F+ +
Sbjct: 499 PTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRL 558
Query: 348 KKPFSPSVWEAIF 360
+ P SV+ +F
Sbjct: 559 EFPLPKSVYFTLF 571
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+FK MK ++P+ V +L + L +E M+ P++ YT +++
Sbjct: 720 LFKDMKRREIVPDVVTYTVLLKNKPERNLSRE-------MKAFDVKPDVFYYTVLIDWQC 772
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K +AKRIF +M +G+ P+A YT L+ CK L++A M+E+G P++
Sbjct: 773 KIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVV 832
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ L+ G + V +A ++ ++EKG
Sbjct: 833 PYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++D CK G + EA ++F M E G P+ YTA++ K +AK IF +M +
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES 825
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
G+ P+ YT L+ G C+ + A + EMLE G P
Sbjct: 826 GVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 184 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A IF +M E+G+ P+A A++ CK G ++EA +F M E G P++V YTA++
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPN 267
G + A ++ ++M GI P
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGIKPT 865
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 203 AMLDGLCKDGLVQEA---LKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM 259
+LD LCK+G V+EA L+ G + +P + I+ ++ G+ ++ K A++++ +M
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 260 QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGV 319
++ + P +Y L++G C+ R+Q A E EM A N F ++DG + +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 320 AEAKGAIRTLIEKGFV 335
+EA G ++E+ FV
Sbjct: 337 SEALG----MMERFFV 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 9/172 (5%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++ CK G + A K+ +M +G P Y + ++K +K ++ ++ K+
Sbjct: 360 SLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEA 419
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G SP+ +Y ++++ LC+ +L A + EM G P++ T L+ + + + EA
Sbjct: 420 GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Query: 323 ---------KGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSVWEAIFGKKAP 365
+G I I + N KG DM K S + KK P
Sbjct: 480 FEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLP 531
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ ++MK + N + ++DGL + G + EAL + + P IV Y ++V+
Sbjct: 304 AMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVK 363
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ KA A +I + M + G+ P +Y + K ++ ++ +++EAGHSP
Sbjct: 364 NFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP 423
Query: 302 NMTTF 306
+ T+
Sbjct: 424 DRLTY 428
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 58/130 (44%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+L+G + +++A KL+ M+ P +V Y ++EGY + + A + +M+
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE 315
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
+ N + ++ GL + RL +A P + T+ LV F K + A
Sbjct: 316 MEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGAS 375
Query: 324 GAIRTLIEKG 333
++ ++ +G
Sbjct: 376 KILKMMMTRG 385
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A++++++MK + P V +++G C+ VQ A+++ M+ +++ +++
Sbjct: 269 AEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIID 328
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +A + +A + + P +Y LV+ CK L A + M+ G P
Sbjct: 329 GLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDP 388
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
TT+ F K E LIE G
Sbjct: 389 TTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 180 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
+M ++ + +K+ E G IP++ A + L K + E ++F +G P Y
Sbjct: 334 SMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGY 393
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
+V+ A + + R ++M +G+ + +SY ++ LCK R+++A F EM +
Sbjct: 394 LVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQD 453
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
G SPN+ TF + G+ V + G + L+ GF
Sbjct: 454 RGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGF 491
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 187 EIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+ K+++++G + ++ + GL + +F + G P +Y AV++
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K++ D A F++M+S+G P+ F+Y +L+ G+CK + +A +M + G+ PN+
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNV 250
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
T+ L+DGF+ V EA + + + NE ++ F+
Sbjct: 251 FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+ D K+M GL+ + A++D LCK ++ A M+++G P +V + +
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY+ + K+ +G P+ ++++++ LC+ ++DAF+ EMLE G
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 301 PNMTTFVDLV 310
PN T+ L+
Sbjct: 528 PNEITYNILI 537
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ +K+ G P+ + +++ LC+ +++A F M E G P + Y ++
Sbjct: 482 VLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCC 541
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
D + ++F KM+ NG+SP+ ++Y +Q CK +++ A E ML G P+
Sbjct: 542 STGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
T+ L+ + +EA+ ++ G V
Sbjct: 602 TYSTLIKALSESGRESEAREMFSSIERHGCV 632
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 5/151 (3%)
Query: 189 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
F++M+ G P+ ++ G+CK G+V EA++L M ++G P + YT +++G+
Sbjct: 203 FQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
A + D+A + M+ ++PN + V G+ +C AFE V +E +
Sbjct: 263 AGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVG 322
Query: 306 FVDLVDGFVKEQGVAEAKGA-IRTLIEKGFV 335
+ D V + +A+ G +R + E+G++
Sbjct: 323 Y-DAVLYCLSNNSMAKETGQFLRKIGERGYI 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A +M++ G+ PN V L G G V++ + + G P+++ ++ +
Sbjct: 442 ENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLI 501
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ +A + DA F++M GI PN +Y +L++ C + + +M E G
Sbjct: 502 INCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGL 561
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
SP++ + + F K + V +A+ ++T++ G
Sbjct: 562 SPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 180 AMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
+ + +++F ++ G+ P+ A++D L K + A F MR G P+ Y
Sbjct: 159 GLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTY 218
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
++ G K D+A R+ ++M+ G PN F+YT+L+ G R+ +A + M
Sbjct: 219 NILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRV 278
Query: 297 AGHSPNMTTFVDLVDGFVK 315
+PN T V G +
Sbjct: 279 RKLNPNEATIRTFVHGIFR 297
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 52/111 (46%)
Query: 228 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 287
G + + Y AV++ KA + ++A +MQ GISPN ++ + G ++
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 288 FEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
++L G P++ TF +++ + + + +A + ++E G NE
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 185 ADEIFKKMKET-GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
A ++F +M+ T G+ P++ +++G CK+ +V EA ++F M P++V Y ++
Sbjct: 192 AHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTII 251
Query: 241 EGYTKAHKADDAKRIFRKM--QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+G +A K A + M ++ + PN SYT LV+G C + +A +ML G
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAI 326
PN T+ L+ G + E K +
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREK-GTIPEIVIYTA 238
+++ ++F+ MK+ G+ P+ + ++L L K G A LF MR G P+ +
Sbjct: 155 QESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNT 214
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ G+ K D+A RIF+ M+ +P+ +Y ++ GLC+ +++ A ML+
Sbjct: 215 LINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA 274
Query: 299 H--SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGF 344
PN+ ++ LV G+ +Q + EA ++ +G V +KG
Sbjct: 275 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 180 AMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGT--IPEIV 234
+M ++A IFK M+ P+ V ++DGLC+ G V+ A + M +K T P +V
Sbjct: 223 SMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVV 282
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
YT +V GY + D+A +F M S G+ PNA +Y L++GL + R
Sbjct: 283 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 212 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQ-SNGISPNAFS 270
GL QE++KLF M++ G P ++ + +++ K + A +F +M+ + G++P++++
Sbjct: 152 GLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYT 211
Query: 271 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
+ L+ G CK S + +AF +M +P++ T+ ++DG + V A + ++
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 331 EKG 333
+K
Sbjct: 272 KKA 274
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 85/187 (45%), Gaps = 2/187 (1%)
Query: 183 EDADEIFKKMKETGLI--PNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+ A+++F+++ + G+ P+ ++ G C++G + A +L LM + +P++ Y ++
Sbjct: 447 KQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLI 506
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G K +A A ++M + P A ++ ++ L K ++F MLE
Sbjct: 507 DGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIR 566
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSVWEAIF 360
N+ +V +A +R L + G++V + + G+L + + +F
Sbjct: 567 QNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLF 626
Query: 361 GKKAPQM 367
+ QM
Sbjct: 627 CLEKSQM 633
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEAL-KLFGLMREKGTIPEIVIYTA 238
E + E+ +MK + P+ + +++ + GL E L LF MR +G P+IV Y
Sbjct: 193 ETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 252
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ D+A+ +FR M GI P+ +Y+ LV+ K RL+ + EM G
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
P++T++ L++ + K + EA G + G N L++
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Query: 180 AMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
+ ++A+ +F+ M + G++P+ +++ K +++ L G M G++P+I Y
Sbjct: 261 GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSY 320
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
++E Y K+ +A +F +MQ+ G +PNA +Y+VL+ + R D + +EM
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 297 AGHSPNMTTFVDLVDGF 313
+ P+ T+ L++ F
Sbjct: 381 SNTDPDAATYNILIEVF 397
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q +D ++F +MK + P+A +++ + G +E + LF M E+ P++
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
Y ++ K +DA++I + M +N I P++ +YT +++ + + ++A M
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN----------------- 337
E G +P++ TF L+ F + V E++ + L++ G N
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 338 EKAVKGFLDMKK 349
E+AVK ++DM+K
Sbjct: 544 EEAVKTYVDMEK 555
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+F +M+ G+ P+ V +L GL EA +F M + G +P++ Y+ +VE +
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K + + + +M S G P+ SY VL++ K +++A +M AG +PN
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 305 TFVDLVDGF 313
T+ L++ F
Sbjct: 354 TYSVLLNLF 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E ++ +M G +P+ + +L+ K G ++EA+ +F M+ G P Y+ +
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + ++ + DD +++F +M+S+ P+A +Y +L++ + ++ +M+E
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
P+M T+ ++ K +A+ ++ + V + KA G ++
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 465
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A IFK +K+ G P+ V M+ G C+ G + A KL+ M +KG P Y ++
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K + + + +M NG S +++G C + +AFE M E G +
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 301 PNMTTFVDLVDGFVKEQGV 319
PN T+ L+ GF KE V
Sbjct: 421 PNAITYNALIKGFCKENKV 439
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++ GLC + EA +F +++KG P+ V+YT ++ G+ + A++++ +M G
Sbjct: 289 IIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKG 348
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
+ PN F+Y V++ G K + F EML G+ M + ++ GF EA
Sbjct: 349 MRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAF 408
Query: 324 GAIRTLIEKGFVVN----EKAVKGF 344
+ + E G N +KGF
Sbjct: 409 EIFKNMSETGVTPNAITYNALIKGF 433
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%)
Query: 196 GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 255
G + + M+ G C G EA ++F M E G P + Y A+++G+ K +K + ++
Sbjct: 386 GTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKL 445
Query: 256 FRKMQSNGISPNAFSYTVLVQGL 278
++++++ G+ P+ +Y LV+ L
Sbjct: 446 YKELKALGLKPSGMAYAALVRNL 468
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 7/168 (4%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+ E+ K+ + GL P ++ G C+ G ++ M P + IY ++
Sbjct: 231 EGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKII 290
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+G K +A IF+ ++ G +P+ YT +++G C+ L A + EM++ G
Sbjct: 291 KGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMR 350
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGF 344
PN + ++ G K ++ + ++ G+ + +KGF
Sbjct: 351 PNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 208 LCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKAD--------------DAK 253
L ++GLV+EA++++ ++++ G +V +V+ G KA K D D++
Sbjct: 155 LSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSE 214
Query: 254 RI-------------------FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
RI ++ G+ P + Y L+ G C+ E M
Sbjct: 215 RIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTM 274
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGFLD 346
+ H P+M + ++ G + EA + L +KG+ VV ++GF +
Sbjct: 275 IAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCE 330
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 187 EIFKKMKETGLIPNAV-AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
E+ K+M E+ + ++ LC G V E +L ++G P +Y ++ G+ +
Sbjct: 201 ELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCE 260
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
+ M + P+ + Y +++GLC + +A+ + + G++P+
Sbjct: 261 IGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVV 320
Query: 306 FVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA 340
+ ++ GF ++ + A+ +I+KG NE A
Sbjct: 321 YTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFA 355
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A EIFK M ETG+ PNA+ A++ G CK+ V++ LKL+ ++ G P + Y A+
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 240 V 240
V
Sbjct: 465 V 465
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Query: 205 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
+DGLCK G + +A++ + G +P+ V YT V+ GY + + A+ ++ +M +
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
P+ +Y VL+ G K RL+ AF++ EM + G PN+ T L+ G K + EA
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 325 AIRTLIEKGFVVNEKAVKGFLDMKKPFSPSVWEAI 359
+ + E+G N+ + + F WE +
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLISKNCDFEK--WEEV 674
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E +K+ GL+P+ V ++ G ++G + A L+ M K P ++ Y ++
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ KA + + A + +M+ G+ PN ++ L+ G+CK + +A+ + +M E G P
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPP 653
Query: 302 NMTTFVDLV 310
N ++ L+
Sbjct: 654 NKYSYTMLI 662
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Query: 181 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
M A +++ M E G++P + MLD K G ++ K++ M+ + V Y
Sbjct: 218 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 277
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++ G++K K ++A+R M+ +G + +S+ L++G CK DA+ EML A
Sbjct: 278 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSV 355
G P +T+ + + +A+ + ++ V + G++ M K S+
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASL 395
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +F ++ + P+ V ++DGLC+ G ++ A +L M + P+++ YT +V
Sbjct: 392 EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-GH 299
+G+ K A ++ +M GI P+ ++YT G + AF EM+ H
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH 511
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGFLD 346
+P++T + +DG K + +A R + G V ++G+L+
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA + +M G+ P + LC G + +A +L M P++V Y +
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTL 380
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ GY K K +A +F +++ I P+ +Y L+ GLC+ L+ A EM
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P++ T+ LV GFVK ++ A ++ KG
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +M L P+ + ++ G K G +++A + M+++G P ++ + A++
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G KA D+A R KM+ GI PN +SYT+L+ C + ++ + EML+ P
Sbjct: 629 GMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
+ T L K+ E + R L+
Sbjct: 689 DGYTHRALFKHLEKDHESREVEFLERLLL 717
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 152 FDNKAGNSSEVAASNLSEEAKSANSNQPAMPE-----DADEIFKKMKETGLIPNAVA--- 203
FD+ G + E+ + + + N A+ + DA E+ M P+ V+
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNT 379
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++ G K G EA LF +R P IV Y +++G ++ + A+R+ +M +
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
I P+ +YT LV+G K L A E EML G P+
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
MLD + G +Q +F LM+EKG + + V YT+++ + + D A R++ +M+ N
Sbjct: 127 TMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDN 186
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFV-------- 314
G P SYT ++ L R+++A E EML + SPN T+ L++ V
Sbjct: 187 GCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEA 246
Query: 315 -------KEQGVAEAKGAIRTLIEKGFVVNEKA 340
+E GV K A LI K E +
Sbjct: 247 LDIFFKMQEIGVQPDKAACNILIAKALKFGETS 279
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+F MKE G++ + V +++ + G V A++L+ MR+ G P +V YTA ++
Sbjct: 144 VFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLF 203
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM- 303
+ ++A ++++M + +SPN +YTVL++ L + ++A + +M E G P+
Sbjct: 204 ADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKA 263
Query: 304 --------------TTFVDLVDGFVKEQGVA 320
T+F+ V ++KE GV
Sbjct: 264 ACNILIAKALKFGETSFMTRVLVYMKENGVV 294
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 64/113 (56%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++D +C ++EA+ L + G P+ +Y +++G+ K +A +++KM+ G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKE 316
+ P+ +Y L+ GL K R+++A + M++AG+ P+ T+ L++G ++
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 22/234 (9%)
Query: 125 FQGRNMSDTNKVVNKLGDSFLDKFKLGFDNKAGNS--SEVAASNLSEEAKSANSNQPAMP 182
F+ N+SD + N + + L F N S S ++ + + +QP
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPN-- 117
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCK--DGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
F+ + T LI +L C+ D + ++ LM G P+ V V
Sbjct: 118 ------FRPGRSTFLI-----LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAV 166
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGH 299
+ + D+AK + +++ P+ ++Y L++ LCKC L +EF EM +
Sbjct: 167 RSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDV 226
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF----VVNEKAVKGFLDMKK 349
P++ +F L+D + + EA + L GF + +KGF + K
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 159 SSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQ 215
++++A +L E + ++A ++ K++ E P+ +L LCK +
Sbjct: 161 TTDIAVRSLCETGRV---------DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 216 EALKLFGLMREKGTI-PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVL 274
+ MR+ + P++V +T +++ + +A + K+ + G P+ F Y +
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 275 VQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
++G C S+ +A +M E G P+ T+ L+ G K V EA+ ++T+++ G+
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
DE+ ++MK+ G P+ VA +++ CK +EA++ F M ++ P I+ +++
Sbjct: 251 VDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLIN 310
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K +DA F + +S+G A +Y LV C R++DA++ EM G P
Sbjct: 311 GLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGP 370
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTL-IEKGFVVNEKAVKGFLDMKK-PFSPSVWEAI 359
N T+ ++ ++ Q EA +T+ E E V+ F + ++ + +W+ +
Sbjct: 371 NARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEM 430
Query: 360 FGK 362
GK
Sbjct: 431 KGK 433
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 117 KSSQTDIGFQGRNMSDTNKVVNKLGDSFLDKFKLGF----DNKAGNSSEVAASNLSEEAK 172
K ++ GF+ S+ N ++ LG + +FKL + D KA LS+E
Sbjct: 116 KWAENQKGFK-HTTSNYNALIESLGK--IKQFKLIWSLVDDMKAKKL-------LSKETF 165
Query: 173 SANSNQPAMPEDADEI---FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMRE 226
+ S + A E F KM+E G + MLD L K V +A K+F M++
Sbjct: 166 ALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKK 225
Query: 227 KGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD 286
K P+I YT ++EG+ + + R+M+ G P+ +Y +++ CK + ++
Sbjct: 226 KRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEE 285
Query: 287 AFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
A F EM + P+ F L++G E+ + +A
Sbjct: 286 AIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 72/136 (52%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++G K G + +AL+ + M ++ P++ + ++ GY ++ K D A +FR+M+
Sbjct: 198 TVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEK 257
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G PN S+ L++G ++++ + EM+E G + T LVDG +E V +A
Sbjct: 258 GCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDA 317
Query: 323 KGAIRTLIEKGFVVNE 338
G + L+ K + +E
Sbjct: 318 CGLVLDLLNKRVLPSE 333
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 3/203 (1%)
Query: 145 LDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAM 204
LD F+ D+ S +AA++ ++ S A P E L P +
Sbjct: 106 LDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPE--LEPIFRSA 163
Query: 205 LDGLCKDGLVQEALKLFGLM-REKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+D C+ + AL F M R P + +Y VV GY K+ D A R +++M
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
P+ ++ +L+ G C+ S+ A + EM E G PN+ +F L+ GF+ + E
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 324 GAIRTLIEKGFVVNEKAVKGFLD 346
+IE G +E + +D
Sbjct: 284 KMAYEMIELGCRFSEATCEILVD 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 66/130 (50%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++++ LC + A+++ + +KG P + T +VEG K+ + + A KM +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
GI P++ ++ +L++ LC DA + G+ P+ TT+ LV GF KE E
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 323 KGAIRTLIEK 332
+ + +++K
Sbjct: 458 EVLVNEMLDK 467
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F++MKE G PN V+ ++ G G ++E +K+ M E G +V+
Sbjct: 247 ALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVD 306
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G + + DDA + + + + P+ F Y LV+ LC ++ A E E+ + G +P
Sbjct: 307 GLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
LV+G K +A G + ++ G +
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGIL 400
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+++G C+ AL LF M+EKG P +V + ++ G+ + K ++ ++ +M G
Sbjct: 234 LINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
+ + +LV GLC+ R+ DA +++L P+ + LV+ E A
Sbjct: 294 CRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM 353
Query: 324 GAIRTLIEKG----FVVNEKAVKGF 344
+ L +KG F+ V+G
Sbjct: 354 EMMEELWKKGQTPCFIACTTLVEGL 378
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Query: 150 LGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLC 209
L NK SE +L E+ N AM E +E++KK + I +++GL
Sbjct: 322 LDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM-EMMEELWKKGQTPCFIA-CTTLVEGLR 379
Query: 210 KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 269
K G ++A M G +P+ V + ++ + + DA R+ S G P+
Sbjct: 380 KSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDET 439
Query: 270 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF 313
+Y VLV G K R ++ EML+ P++ T+ L+DG
Sbjct: 440 TYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+AD +F +M GL P +M+DG CK+G + L M E P+++ YT+++
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G + + +A + +M+ PN ++ L+QGLCKC +A + EM E
Sbjct: 692 HGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEME 751
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P+ ++ LV F+ + + G R ++ KG
Sbjct: 752 PDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 185 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ KKM+ G I + ++ LC++G +A K + +G + +V TA ++
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G K D +FR + +NG P+ +Y VL++ LCK R +A EM+ G P
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
+ T+ ++DG+ KE + I + E
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYE 677
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+F+ + G P+ +A ++ LCK EA LF M KG P + Y ++++G+
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K + D +M + +P+ +YT L+ GLC R +A EM PN
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
TF+ L+ G K EA R + EK
Sbjct: 720 ITFMALIQGLCKCGWSGEALVYFREMEEK 748
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 196 GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 255
G + + A +DGL K+ V L+LF + G P+++ Y +++ KA + +A +
Sbjct: 577 GHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADIL 636
Query: 256 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
F +M S G+ P +Y ++ G CK + V M E +P++ T+ L+ G
Sbjct: 637 FNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCA 696
Query: 316 EQGVAEA 322
+EA
Sbjct: 697 SGRPSEA 703
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA--MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
E A +F ++ G + ++ ++ CK G V +A +L ++ E+ Y ++
Sbjct: 231 ERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLI 290
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K + D A ++F KM+ G++ + Y VL+ GLCK L+ A +E+ +G
Sbjct: 291 HGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIP 350
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
P+ L+ F +E ++ I I+K
Sbjct: 351 PDRGILGKLLCSFSEESELSRITEVIIGDIDK 382
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + + + GLIP + +++G+CK+G +E+LKL G M++ G P +
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYG 517
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ A + +KM+ G P T LV+ LC+ R DA ++ ++ G
Sbjct: 518 CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLG 577
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+M +DG +K +GV R + G
Sbjct: 578 HMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 218 LKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG 277
++LF M ++G + V YT +++G +A D A+ IF++M S+G+ P+ +Y +L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 278 LCKCSRL---------QDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRT 328
LCK +L +D ++ + G PN+ T+ ++ GF K+ EA R
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 329 LIEKG 333
+ E G
Sbjct: 121 MKEDG 125
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEAL---------KLFGLMREKGTIPE 232
A EIFK+M G+ P+ + +LDGLCK+G +++AL LF + KG P
Sbjct: 35 AQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPN 94
Query: 233 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQ 276
+V YT ++ G+ K ++A +FRKM+ +G P++ +Y L++
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR 138
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+F++M + GL+ N V ++ GL + G A ++F M G P+I+ Y +++G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 244 TK---------AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
K A K +D +F + G+ PN +YT ++ G CK ++A+ +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 295 LEAGHSPNMTTFVDLV-----DG-------FVKEQ------GVAEAKGAIRTLIEKGFVV 336
E G P+ T+ L+ DG +KE G A G + ++ G
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG--- 178
Query: 337 NEKAVKGFLDM 347
+ KGFL+M
Sbjct: 179 --RLDKGFLEM 187
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 184 DADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+ADE+F+K+ G+ P+ V M +DG C G + A L M P+ V Y ++
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G K ++A+ + +M+ GI P+ SY L+ G K + AF EML G +
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA 340
P + T+ L+ G K Q A+ +R + +G V N+ +
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSS 609
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ ++MKE GL+P++V+ ++ G +G ++ A M ++G +P Y ++
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G +K + A+ + R+++ GI ++ +Y +L+ G C+ + AF EM+ G P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
T+ L+ ++ EA ++ KG
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 39/188 (20%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI-------- 255
M++ LCK+G +++A G+M G P IV Y +V+G++ + + A+ I
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 256 ------------------------FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 291
R+M+ G+ P++ SY +L++G L+ AF +
Sbjct: 291 FQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYR 350
Query: 292 VEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA----VKGFL-- 345
EM++ G P T+ L+ G E + A+ IR + EKG V++ + G+
Sbjct: 351 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQH 410
Query: 346 -DMKKPFS 352
D KK F+
Sbjct: 411 GDAKKAFA 418
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + K+M + P+ V ++ GLC +G +EA +L G M+ +G P+ + Y ++
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY+K A + +M S G +P +Y L++GL K + A E EM G P
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 302 NMTTFVDLVDGF 313
N ++F +++
Sbjct: 606 NDSSFCSVIEAM 617
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 209 CKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNA 268
C+ +V EA++ F LM+EKG P+ ++ ++ ++ ++A + M I N
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225
Query: 269 FSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRT 328
+++ +++ LCK +L+ A F M G P + T+ LV GF + A+ I
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285
Query: 329 LIEKGF 334
+ KGF
Sbjct: 286 MKSKGF 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A+ + ++++E G++ ++V +++G C+ G ++A L M G P YT++
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + +K +A +F K+ G+ P+ L+ G C + AF EM
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAK 323
+P+ T+ L+ G E EA+
Sbjct: 499 NPDDVTYNCLMRGLCGEGKFEEAR 522
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++ LC+ +EA +LF + KG P++V+ +++G+ D A + ++M
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
I+P+ +Y L++GLC + ++A E EM G P+ ++ L+ G+ K+ A
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Query: 323 KGAIRTLIEKGF 334
++ GF
Sbjct: 557 FMVRDEMLSLGF 568
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A E+ +MK G+ P+ ++ ++ G K G + A + M G P ++ Y A+
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 278
++G +K + + A+ + R+M+S GI PN S+ +++ +
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA ++ ++K +G P+ ++ G CK + +A++++G M+ G +P+ ++Y +
Sbjct: 306 KDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCL 365
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G KA K +A ++F KM G+ + ++Y +L+ GL + R + F ++ + G
Sbjct: 366 LDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQ 425
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
+ TF + +E + A + + +GF V+ + L
Sbjct: 426 FVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 185 ADEIFKKMKETGLI------PNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVI 235
A +FK+MKE + P+ +++ LC G ++AL ++ ++ G P+
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 295
Y +++G K+++ DDA RI+ +MQ NG P+ Y L+ G K ++ +A + +M+
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 296 EAGHSPNMTTFVDLVDGFVKEQGVAEA 322
+ G + T+ L+DG + G AEA
Sbjct: 387 QEGVRASCWTYNILIDGLFR-NGRAEA 412
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 212 GLVQEALKLFGLMREKGTI------PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGIS 265
G + AL LF M+E+ ++ P+I Y +++ KA DA ++ +++ +G
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 266 PNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGA 325
P+ +Y +L+QG CK R+ DA EM G P+ + L+DG +K + V EA
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 326 IRTLIEKG 333
++++G
Sbjct: 382 FEKMVQEG 389
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 60/108 (55%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
I ++ GL K G A + + ++G +IV+Y ++ KA + D+A ++F
Sbjct: 665 IATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFD 724
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
M+SNGI+P+ SY +++ K +L++A+++ ML+AG PN T
Sbjct: 725 HMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA I+ +M+ G +P+ + +LDG K V EA +LF M ++G Y +
Sbjct: 341 DDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNIL 400
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G + +A+ +F ++ G +A +++++ LC+ +L+ A + EM G
Sbjct: 401 IDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGF 460
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVV 336
S ++ T L+ GF K QG + K + I +G +V
Sbjct: 461 SVDLVTISSLLIGFHK-QGRWDWKEKLMKHIREGNLV 496
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A +I + MK+T ++P+ +++GLC G ++E L+L M+ P++V Y +
Sbjct: 292 KEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-G 298
++G + + +A+++ +M+++G+ N ++ + ++ LCK + + E+++ G
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
SP++ T+ L+ ++K ++ A +R + +KG +N + LD
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ ++M + G+ N + + LD LCK+ + EA L ++G I + V Y ++
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIM 494
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ + K + A ++ +M+ I+P ++ L+ GLC + + A E E+ E+G P
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
+ +TF ++ G+ KE V +A
Sbjct: 555 DDSTFNSIILGYCKEGRVEKA 575
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 183 EDADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
EDA + ++M E + P+ V +L + K G + + +L M++ G +P V Y
Sbjct: 221 EDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+V GY K +A +I M+ + P+ +Y +L+ GLC +++ E M
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
P++ T+ L+DG + EA+ + + G N+
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCK---DGLVQEALKLFGLMREKGTIPEIVI 235
P A +IF+KM L PN + +L GL + + A ++F M + G +
Sbjct: 147 PHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQT 206
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+ +V GY K +DA + +M S ++P+ +Y +++ + K RL D E ++M
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
+ G PN T+ +LV G+ K + EA
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEA 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 184 DADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEAL--KLFGLMREKGTIPEIVIYTA 238
+A ++ ++M+ G+ N V L LCK+ +EA+ K+ L+ G P+IV Y
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEE-KREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++ Y K A + R+M GI N + ++ LCK +L +A + G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEA 322
+ T+ L+ GF +E+ V +A
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKA 505
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+L+GLCK+G+ ++AL F + E+ + + V Y ++ + K K +A + +M+ G
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEF 290
+ P+ F+Y + L + +L + E
Sbjct: 656 LEPDRFTYNSFISLLMEDGKLSETDEL 682
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 196 GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 255
GL+ + M D L K G + EA L G M+++ P++VIY +V + +A R+
Sbjct: 290 GLVNYGILMSD-LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRV 348
Query: 256 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
+MQ G PNA +Y +++ G C+ ML + H P TFV +V G +K
Sbjct: 349 LTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIK 408
Query: 316 EQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
+ A + + +K A + L
Sbjct: 409 GGNLDHACFVLEVMGKKNLSFGSGAWQNLL 438
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + + M + + PNAV ++ GLC G EA KL M +G P +V Y ++
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K + D+AK + +M+ I P+ Y +LV LC R+ +A+ EM G P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 302 NMTTFVDLVDGFVK 315
N T+ ++DGF +
Sbjct: 360 NAATYRMMIDGFCR 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A F K+ L PN+V+ ++ G + A K+F M E P +V Y ++
Sbjct: 168 EKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSL 227
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + AK + M I PNA ++ +L++GLC +A + +M G
Sbjct: 228 IGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGC 287
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAK 323
P + + L+ K + EAK
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAK 311
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 189 FKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
F KMK + P+ ++DG CK V++AL L M EKG P Y +++ K
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
A + + A +F++++ N + ++ Y V+++ KC +L +A + EM G P++
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 306 FVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ L+ G VK + EA +R + E G
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
Query: 183 EDADEIFKKMKET-GLIPNAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A+E+FK++KE G + + V M+ K G + EA+ LF M+ +G+ P++ Y A+
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G KA ++A + RKM+ NG + S+ +++ G + + A E + +G
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
P+ T+ L+ F EA +R + +KGF + LD
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILD 627
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 190 KKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKG-TIPEIVIYTAVVEGYTKAHK 248
+K K T N+V ++ L ++G ++ +++ M +G P+ + Y+A++ Y K +
Sbjct: 191 RKCKPTSSTYNSVILM--LMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGR 248
Query: 249 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVD 308
D A R+F +M+ N + P YT L+ K +++ A + EM AG SP + T+ +
Sbjct: 249 NDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 308
Query: 309 LVDGFVKEQGVAEAKGAIRTLIEKGF 334
L+ G K V EA G + ++ G
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGL 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 178 QPAMPEDADEIFKKMKETG-LIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEI 233
Q E E++ +M G P+ + A++ K G A++LF M++ P
Sbjct: 209 QEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTE 268
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
IYT ++ Y K K + A +F +M+ G SP ++YT L++GL K R+ +A+ F +
Sbjct: 269 KIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKD 328
Query: 294 MLEAGHSPNMTTFVDLVD 311
ML G +P++ +L++
Sbjct: 329 MLRDGLTPDVVFLNNLMN 346
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 41/189 (21%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVI---- 235
E A ++F++MK G P ++ GL K G V EA + M G P++V
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNL 344
Query: 236 -------------------------------YTAVVEGY--TKAHKADDAKRIFRKMQSN 262
Y V++ +KAH + F KM+++
Sbjct: 345 MNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH-VSEVSSWFDKMKAD 403
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
+SP+ F+Y++L+ G CK +R++ A EM E G P + L++ K + A
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 323 KGAIRTLIE 331
+ L E
Sbjct: 464 NELFKELKE 472
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 39/191 (20%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A +F +MK+ + P +L K G V++AL LF M+ G P + YT +
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM----- 294
++G KA + D+A ++ M +G++P+ L+ L K R+++ EM
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 295 ----------LEA-----GH----------------SPNMTTFVDLVDGFVKEQGVAEAK 323
++A H SP+ T+ L+DG+ K V +A
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKAL 429
Query: 324 GAIRTLIEKGF 334
+ + EKGF
Sbjct: 430 LLLEEMDEKGF 440
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A I M+E GL P +++ L K G V EA + F M E G P+ + Y ++
Sbjct: 566 AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 625
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
Y + + D+A + ++ + + P++F+YTVL+ G K ++ ++ +MLE G SP
Sbjct: 626 TYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Query: 302 NMTTFVDLVDGFVKE 316
N+ + L+ F+K+
Sbjct: 686 NVVLYTALIGHFLKK 700
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 8/190 (4%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q + ED + ++E +P+ + +++ LCK A + M E G P +
Sbjct: 524 QENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVA 583
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
IY++++ K + +A+ F KM +GI P+ +Y +++ + R+ +A E E+
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF---VVNEKAVKGFLDMKKPF 351
++ P+ T+ L+ GFVK + + + ++E G VV A+ G K F
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF 703
Query: 352 SPSVWEAIFG 361
S +FG
Sbjct: 704 KFSF--TLFG 711
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ K+K++ +IPN ++ G C G + EA M+++G +P +V YT +++
Sbjct: 779 AMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ +A + A +F + P+ Y+ L++GLC R DA +EM ++G +P
Sbjct: 838 SHIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIR 327
N ++ L+ + EA ++
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVK 920
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+ +F M+ G + V ++ CKD + A++L+ M E+ + I+ ++
Sbjct: 255 EAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI 314
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH- 299
G+ K D + +F +M G+ N F+Y +++ CK + A V G
Sbjct: 315 HGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVN--NTGSE 372
Query: 300 --SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
S N+ + +L+ GF K+ G+ +A + +++ G V
Sbjct: 373 DISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV 410
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI--PEIVIYT 237
++A + M++ G++PN V ++ + G ++ A+ LF +GT P+ V+Y+
Sbjct: 811 DEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF-----EGTNCEPDQVMYS 865
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+++G + DA + +MQ +GI+PN SY L+Q LC +A + +M
Sbjct: 866 TLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAAL 925
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
P L+ +E+ + EA+ +++ G
Sbjct: 926 DIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A+E F KM E+G+ P+ +A M++ ++G + EA +L + + P YT ++
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ K + + KM +G+SPN YT L+ K + +F M E
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 301 PNMTTFVDLVDGFVK 315
+ ++ L+ G +
Sbjct: 720 HDHIAYITLLSGLWR 734
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 181 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV-IY 236
M + +F +M + G+ N M+ CK+G V AL+LF I V Y
Sbjct: 322 MLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCY 381
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
T ++ G+ K D A + +M NGI P+ +Y VL++ L KC L+ A +L+
Sbjct: 382 TNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILD 441
Query: 297 AGHSPN 302
G N
Sbjct: 442 NGCGIN 447
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
M+ LCK G V+E+ M+++G P++ +Y A++E KA AK+++ +M G
Sbjct: 403 MISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEG 462
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
N +Y VL++ L + +++ +MLE G P+ T ++ L++G KE + A
Sbjct: 463 CKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM 522
Query: 324 GAIRTLIEK 332
R +E+
Sbjct: 523 EVFRKCMER 531
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 189 FKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
++MK+ GL P+ A+++ CK +++ A KL+ M +G + Y ++ ++
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+A+++ R+F KM GI P+ Y L++GLCK ++++ A E + +E H
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDH 533
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 182 PEDADEIFKKMKETGLIPNAVAMLD----GLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
P+ A E M TG +P A+ L LC+ +K + L+ KG E+ Y+
Sbjct: 343 PDSAVEFLVYMVSTGKLP-AIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYS 401
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++ KA + ++ ++M+ G++P+ Y L++ CK ++ A + EM
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
G N+TT+ L+ +E E+ ++E+G
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGI 498
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 180 AMPEDADEIFKKMKETGLIPNAV----AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVI 235
+MP+ A ++FK+M+E A+ +L+ + + LF G P +
Sbjct: 92 SMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQT 151
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 295
Y +++ K + + A+ M G P+ FSY+ ++ L K +L DA E EM
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 296 EAGHSPNMTTFVDLVDGFVKEQ 317
E G +P++T + L+DGF+KE+
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEK 233
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++D LCK ++EA L M + G + A++ G + + +A R+M N
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G P SY +L+ GLCK + +A F EMLE G P++ T+ L+ G +++ + A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 323 KGAIRTLIEKGF 334
++ G
Sbjct: 554 LELWHQFLQSGL 565
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A+ +F ++ E + V ML G C+ G ++E+L+L+ +M K ++ IV Y +
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNIL 365
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G + K D+A I+R M + G + + +Y + + GLC + A E+ +G
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
++ + ++D K++ + EA ++ + + G +N +
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALI 471
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 185 ADEIFKKMKE-TGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
A E++ ++ E + + PN M+ GL K G V + LK++ M++ ++ Y++++
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G A D A+ +F ++ S + +Y ++ G C+C +++++ E ++E +S
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNS 356
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
N+ ++ L+ G ++ + EA R + KG+ ++ F+
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFI 401
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A ++M + G P V+ ++ GLCK G EA M E G P++ Y+ ++
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G + K D A ++ + +G+ + + +L+ GLC +L DA M +
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 301 PNMTTFVDLVDGFVK 315
N+ T+ L++GF K
Sbjct: 602 ANLVTYNTLMEGFFK 616
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTA 238
+DA E+F +M E G+ P+ ++DG K+ + A++L+ L+ + P + +
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ G +K + DD +I+ +M+ N + ++Y+ L+ GLC + A E+ E
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK---GFVVNEKAVKGFLD 346
S ++ T+ ++ GF + + E+ R + K V +KG L+
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLE 371
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E++ + ++GL + + ++ GLC G + +A+ + M + +V Y ++E
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ K ++ A I+ M G+ P+ SY +++GLC C + A EF + G P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 302 NMTTFVDLVDGFV 314
+ T+ LV V
Sbjct: 673 TVYTWNILVRAVV 685
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A + K+M + G+ N+ A++ GL +D + EA M + G P +V Y +
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G KA K +A ++M NG P+ +Y++L+ GLC+ ++ A E + L++G
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Query: 300 SPNMTTFVDLVDGF 313
++ L+ G
Sbjct: 566 ETDVMMHNILIHGL 579
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
+ +F + G+ PN ++ CK ++A M ++G P++ Y+ V+
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE-AGHS 300
KA K DDA +F +M G++P+ Y +L+ G K + A E +LE +
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252
Query: 301 PNMTTFVDLVDGFVK 315
PN+ T ++ G K
Sbjct: 253 PNVKTHNIMISGLSK 267
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 183 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D +I+++MK+ + +++ GLC G V +A +F + E+ ++V Y +
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ + K ++ ++R M+ S N SY +L++GL + ++ +A M G+
Sbjct: 332 LGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ + TT+ + G V +A G ++ + G ++ A +D
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIID 437
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 205 LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
+ LCK +EA L M G P V Y+ ++ G+ ++AK++F+ M + G
Sbjct: 264 IQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC 323
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
P++ Y L+ LCK + A C E +E P+ + LV+G K+ V EAK
Sbjct: 324 KPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKE 383
Query: 325 AIRTLIEK 332
I + EK
Sbjct: 384 LIGQVKEK 391
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
M+ C+ G + + M KG P + ++ G+ K+D+ ++ M+ G
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 252
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
++ +Y + +Q LCK + ++A ML AG PN T+ L+ GF E EAK
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 312
Query: 324 GAIRTLIEKG 333
+ ++ +G
Sbjct: 313 KLFKIMVNRG 322
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A +F++M + G+ P A +LD G+V++A +F MR P++ YT +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y A + A++ F++++ +G PN +Y L++G K + ++ E +M +G
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
N T ++D + + A G + + G ++KA L +
Sbjct: 451 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSL 498
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%)
Query: 202 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 261
+ ++ K G A ++ ++ + G+ P ++ YTA++E Y + K ++A+ IFR+MQS
Sbjct: 143 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 202
Query: 262 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+G P+A +Y ++++ + + ++A E +L+ SP
Sbjct: 203 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP 242
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 183 EDADEIFKKM---KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
++A+E+F+ + K++ L P+ M+ K G ++A K+F M KG V Y
Sbjct: 226 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 285
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
+++ + ++K + +I+ +MQ + I P+ SY +L++ + R ++A EML+
Sbjct: 286 NSLM-SFETSYK--EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 342
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
AG P + L+D F V +AK +++
Sbjct: 343 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 197 LIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIF 256
L+ N V +DG + G AL + LM G P + A++ GY K + DA +
Sbjct: 406 LLWNVV--IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVK 463
Query: 257 RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKE 316
+M+S I P+ +Y +L+ C L+ AF+ EML G P++ T+ +LV G +
Sbjct: 464 NEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWK 523
Query: 317 QGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFS 352
+ +A+ + + G ++ FL + K ++
Sbjct: 524 GRLKKAESLLSRIQATGITIDHVP---FLILAKKYT 556
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 190 KKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
KKM +G+IP + +L+GLCK G +++A L MRE G P V Y +++G
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSV 204
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK 280
+ D A +F M GI PN + ++V LC+
Sbjct: 205 NNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E++K+M + + ++V ++ GLC G + A M ++G P++ Y ++
Sbjct: 284 ALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 343
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K K D+A + MQ+ G++P+ SY V++QGLC + A EF + ML++ P
Sbjct: 344 ALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLP 403
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFL 345
+ + ++DG+ + + A + ++ G N + G++
Sbjct: 404 EVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV 451
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A ++ M+ G+ P+ ++ ++ GLC G V A + M + +PE++++ V
Sbjct: 352 DEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVV 411
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++GY + A + M S G+ PN ++ L+ G K RL DA+ EM
Sbjct: 412 IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI 471
Query: 300 SPNMTTF 306
P+ TT+
Sbjct: 472 HPDTTTY 478
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 42/182 (23%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIP-------- 231
E AD + ++M+E G PN V+ ++ GLC V +AL LF M + G P
Sbjct: 173 EKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNII 232
Query: 232 -------------------------------EIVIYTAVVEGYTKAHKADDAKRIFRKMQ 260
+IVI T +++ K A ++++M
Sbjct: 233 VHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMS 292
Query: 261 SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVA 320
+ ++ Y V+++GLC + A+ F +M++ G +P++ T+ L+ KE
Sbjct: 293 QKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352
Query: 321 EA 322
EA
Sbjct: 353 EA 354
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++ LC G + AL L M G IP ++ + ++ G KA + A + R+M+
Sbjct: 126 SIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREM 185
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKE 316
G SPN SY L++GLC + + A M + G PN T +V ++
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQK 239
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 2/164 (1%)
Query: 159 SSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEAL 218
+ + L ++ N+N+ + E D + I ++D K+G V +AL
Sbjct: 228 TCNIIVHALCQKGVIGNNNKKLLEEILDS--SQANAPLDIVICTILMDSCFKNGNVVQAL 285
Query: 219 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 278
+++ M +K + V+Y ++ G + A M G++P+ F+Y L+ L
Sbjct: 286 EVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 345
Query: 279 CKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
CK + +A + M G +P+ ++ ++ G V A
Sbjct: 346 CKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+EI K ++++ L P+ V+ ++ G C+ GL+QEA+++ M E+G P I Y V
Sbjct: 685 AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
GYT + + + M N PN ++ ++V G C+ + +A +F
Sbjct: 745 GYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDF 793
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A + K+M+E ++V ++ + G +EA + +M +KG +P + YT V+
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ Y KA K D+A ++F M+ G PN +Y ++ L K SR + + +M G S
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 301 PNMTTF 306
PN T+
Sbjct: 454 PNRATW 459
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
++ F K+ G P+ V +ML ++ + +A + +RE G P++V Y ++++
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
Y + + A+ I + ++ + + P+ SY +++G C+ +Q+A EM E G P
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ T+ V G+ AE + I + + NE K +D
Sbjct: 735 CIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A E F ++K G P V A+L K G+ EAL + M E + V Y +V
Sbjct: 299 EAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV 358
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
Y +A + +A + M G+ PNA +YT ++ K + +A + M EAG
Sbjct: 359 AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418
Query: 301 PNMTTF 306
PN T+
Sbjct: 419 PNTCTY 424
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + + M + G++PNA+ ++D K G EALKLF M+E G +P Y AV
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV--EMLEA 297
+ K ++++ ++ M+SNG SPN ++ ++ LC ++ D F V EM
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCG-NKGMDKFVNRVFREMKSC 485
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
G P+ TF L+ + + +A + GF
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
M + A+ I + ++E GL P+ V +++D + G +A ++ + + P++V Y
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
V++G+ + +A R+ +M GI P F+Y V G + + M +
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEA 322
PN TF +VDG+ + +EA
Sbjct: 766 DCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 8/170 (4%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGL---MREKGTIPEIVIY 236
E A ++F++MKE G P V +LD K G + K+ G+ MR KG +
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG--RSWRKILGVLDEMRSKGLKFDEFTC 284
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
+ V+ + +AK F +++S G P +Y L+Q K +A EM E
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ T+ +LV +V+ EA G I + +KG + N +D
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+L ++GL++EA + F ++ G P V Y A+++ + KA +A + ++M+ N
Sbjct: 286 TVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEEN 345
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
++ +Y LV + ++A M + G PN T+ ++D + K EA
Sbjct: 346 SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEA 405
Query: 323 KGAIRTLIEKGFVVNEKAVKGFLDM 347
++ E G V N L +
Sbjct: 406 LKLFYSMKEAGCVPNTCTYNAVLSL 430
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 17/172 (9%)
Query: 171 AKSANSNQPAMPEDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEA----LKLFGL 223
AKS N+ D + K G+ + +AM +D L K+ ++ A LKLF
Sbjct: 214 AKSGKYNKAV-----DAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT 268
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
++ P+ + ++ G+ KA K DDA+ + M+ +P+ +YT V+ CK
Sbjct: 269 IK-----PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
+ E EM E G +PN+ T+ ++ K + VAEA G + E G V
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCV 375
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+DA + MK T P+ V + ++ CK+G + ++ MRE G P +V YT V
Sbjct: 290 DDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIV 349
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+ K+ + +A ++ KM+ +G P+A Y+ L+ L K R +DA E +M G
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 138 NKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGL 197
NK D+FL+ K + + +A ++L + NS E A E+F K+ +T +
Sbjct: 220 NKAVDAFLEMEK----SYGVKTDTIAMNSLMDALVKENS-----IEHAHEVFLKLFDT-I 269
Query: 198 IPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKR 254
P+A ++ G CK +A + LM+ P++V YT+ VE Y K
Sbjct: 270 KPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNE 329
Query: 255 IFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLV 310
+ +M+ NG +PN +YT+++ L K ++ +A +M E G P+ + L+
Sbjct: 330 MLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
+E+ ++M+E G PN V ++ L K V EAL ++ M+E G +P+ Y++++
Sbjct: 327 VNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIH 386
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EAGH- 299
+K + DA IF M + G+ + Y ++ SR + A M E G
Sbjct: 387 ILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGES 446
Query: 300 -SPNMTTFVDLV 310
SPN+ T+ L+
Sbjct: 447 CSPNVETYAPLL 458
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 51/208 (24%)
Query: 188 IFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+++KMKE G +P+A +++ L K G ++A ++F M +G ++++Y ++
Sbjct: 365 VYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAAL 424
Query: 245 KAHKADDAKRIFRKMQ--------------------------------------SNGISP 266
+ + A R+ ++M+ N +S
Sbjct: 425 HHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSI 484
Query: 267 NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAI 326
+ +Y +L++GLC ++++A F E + G P +T LVD K + +AEAK I
Sbjct: 485 DVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEK-KNMAEAKLKI 543
Query: 327 RTLIEKGFVVNEKAVKGFLDMKKPFSPS 354
++L++ K +D P S S
Sbjct: 544 QSLVQS---------KTMIDSHSPLSVS 562
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A +F++M + G+ P A +LD G+V++A +F MR P++ YT +
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y A + A++ F++++ +G PN +Y L++G K + ++ E +M +G
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
N T ++D + + A G + + G ++KA L +
Sbjct: 458 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSL 505
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%)
Query: 202 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 261
+ ++ K G A ++ ++ + G+ P ++ YTA++E Y + K ++A+ IFR+MQS
Sbjct: 150 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 209
Query: 262 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+G P+A +Y ++++ + + ++A E +L+ SP
Sbjct: 210 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP 249
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 183 EDADEIFKKM---KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIY 236
++A+E+F+ + K++ L P+ M+ K G ++A K+F M KG V Y
Sbjct: 233 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 292
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
+++ + ++K + +I+ +MQ + I P+ SY +L++ + R ++A EML+
Sbjct: 293 NSLM-SFETSYK--EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 349
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
AG P + L+D F V +AK +++
Sbjct: 350 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 220 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGL 278
LF M + G P++ +V+GY + +DA RIF +M PN+F+Y L+ GL
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 279 CKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
C R +A E EM G PN ++ LV+ F + +A + +IE G VV+
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 339 KAVKGFLD 346
+ + +D
Sbjct: 395 ISYRTLVD 402
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTI-PEIVIYTA 238
E +F++M ++G+ P+ A+ + G V +AL++F M P Y
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ G + +A+ + +M+ G PN SY LV + DA + EM+E G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
+ ++ LVD ++ EA + L EK V
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV 426
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 185 ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
A + F++M+E +I +L C++G +EA++L M ++G P +V + ++ GY
Sbjct: 235 ATKFFRRMRERDVIAWNSVLL-AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ K D A + +KM++ GI+ + F++T ++ GL A + +M AG PN
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVK-GFLD 346
T + V + + +I +G V+ AVK GF+D
Sbjct: 354 TIMSAV-----------SACSCLKVINQGSEVHSIAVKMGFID 385
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
Query: 180 AMPEDADEIFKKMKETGLIPNAVAMLDGLCKDG---LVQEALKLFGLMREKGTIPEIVIY 236
M A ++F+KM G++PNAV ++ + ++ + ++ + + G I ++++
Sbjct: 331 GMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVG 390
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
++V+ Y+K K +DA+++F +++ + +++ ++ G C+ A+E M +
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQD 446
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEA 322
A PN+ T+ ++ G++K EA
Sbjct: 447 ANLRPNIITWNTMISGYIKNGDEGEA 472
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
EDA ++F +K + +M+ G C+ G +A +LF M++ P I+ + ++ G
Sbjct: 404 EDARKVFDSVKNKD-VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 243 YTKAHKADDAKRIFRKMQSNG-ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
Y K +A +F++M+ +G + N ++ +++ G + + +A E +M + P
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 302 NMTTFVDLV 310
N T + L+
Sbjct: 523 NSVTILSLL 531
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
++F+KMK+ G P+ ++ + G V EA+ +F + P+I+ Y +++
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K D+A F++MQ G++P+ +Y+ L++ K R++ A+ EML G PN+
Sbjct: 523 GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
T+ L+D K AEA + ++G
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 7/148 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A IF++++ + P+ ++ +++ L K+G V EA F M+EKG P++V Y+ +
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+E + K + + A +F +M G PN +Y +L+ L K R +A + +M + G
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIR 327
+P+ T+ L + Q V+ K IR
Sbjct: 614 TPDSITYTVL----ERLQSVSHGKSRIR 637
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%)
Query: 202 VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS 261
++ML+ LC G EA+++ + EKG + + ++Y V K + +F KM+
Sbjct: 411 MSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK 470
Query: 262 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
+G SP+ F+Y +L+ + + +A E+ + P++ ++ L++ K V E
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDE 530
Query: 322 AKGAIRTLIEKGF 334
A + + EKG
Sbjct: 531 AHVRFKEMQEKGL 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+LD L KD ++A ++F M+++ + YT ++ + K D+A +F +M + G
Sbjct: 244 LLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEG 300
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
++ N Y L+Q L K + A + M+E G PN T+ L++ V E +
Sbjct: 301 LTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLD 360
Query: 324 GAI 326
G +
Sbjct: 361 GVV 363
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
Query: 183 EDADEIFKKMKE-TGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
++A + FK++ E G+ P+ V M+ LC+ G + + L +F + + G P+++ +
Sbjct: 174 DEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNT 233
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++E + + + RI+ M+S +SPN SY V+GL + + DA M G
Sbjct: 234 LLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEG 293
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
SP++ T+ L+ + + + E + EKG
Sbjct: 294 ISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 22/186 (11%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+D IF+++++ G P+ ++ +L+ + L E +++ LM+ K P I Y +
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V G T+ K DA + M++ GISP+ +Y L+ + L++ + EM E G
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL----DMKKPFSPSV 355
+P+ T+ L+ K KG + +E V+E+A+K L +M KP V
Sbjct: 330 TPDTVTYCMLIPLLCK-------KGDLDRAVE----VSEEAIKHKLLSRPNMYKP----V 374
Query: 356 WEAIFG 361
E + G
Sbjct: 375 VERLMG 380
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 212 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKM-QSNGISPNAFS 270
G+ + A KLF M E + + A++ Y + K D+A + F+++ + GI+P+ +
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 271 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
Y +++ LC+ + D E+ + G P++ +F L++ F + + E
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVE 246
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Query: 185 ADEIFKKMK-ETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
A +++K MK +G P+A+ ++D L K EA L M + G P + Y+A++
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY KA K ++A+ F M +G P+ +Y+V++ L + + + A+ +M+ GH+
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT 540
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
P+ T + ++ G +KE + + IR + E
Sbjct: 541 PSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+ +A+ +F +++ G P+AV ++L ++ ++ +++ M++ G + + Y
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 238 AVVEGYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
++ Y K + D A ++++ M+ +G +P+A +YTVL+ L K +R +A EML+
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
G P + T+ L+ G+ K EA+ ++ G + A LD+
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDV 517
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 184 DADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+ +I+ MK G +P M++ LCK V++A + M E E+ I+ +++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ YT +++++++ G+ P+ +Y L+ C+ R ++ + +M G
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
P + T+ L+ F K++ + +A+ L+ KG
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 182 PEDADEIFKKMKETGL----IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
PE A ++ + + G P +++ K L Q+A + G +R+ G P++ +
Sbjct: 732 PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+++ Y + + A+ IF M +G SP S +L+ LC RL++ + E+ +
Sbjct: 792 SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
G + ++ + ++D F + + E K ++ G++
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL 889
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQE--ALKLFGLMREKGTIPEIVIYTAV 239
A E+ M++ G +P+ ++ +++ K G + A++L ++R G P+ + Y +
Sbjct: 244 AQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTL 303
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ ++ D A ++F M+++ P+ ++Y ++ +C +A +E+ G
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
P+ T+ L+ F +E+ + K + + + GF +E + M
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 183 EDADEIFKKMKETG-----LIPNAVAMLDGLCKDGLVQEALKLFGLMR-EKGTIPEIVIY 236
E E++++M++ G + N + + G K G + AL+L+ M+ G P+ + Y
Sbjct: 384 EKVKEVYQQMQKMGFGKDEMTYNTIIHMYG--KQGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
T +++ KA++ +A + +M GI P +Y+ L+ G K + ++A + ML
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFL 345
+G P+ + ++D ++ +A G R +I G + + E + G +
Sbjct: 502 SGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLM 554
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P A E+ ++ +GL P+A+ +L +D + A+K+F M P++ Y A
Sbjct: 278 PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNA 337
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ Y + A +A+R+F +++ G P+A +Y L+ + + E +M + G
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 299 HSPNMTTFVDLVDGFVKE 316
+ T+ ++ + K+
Sbjct: 398 FGKDEMTYNTIIHMYGKQ 415
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%)
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
M+ G IP+ + +++ Y K + D+A R+F++M G PNA++Y+ LV+G+C+ R
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
+ F EM G PN + ++ L+ E+ + EA + ++
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDML 320
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Query: 190 KKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKA 246
K+MK G+IP+ + + K V EA+++F M G+ P Y+ +V+G +
Sbjct: 212 KQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 247 HKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTF 306
+ +++MQ G+ PN Y VL+ L RL +A E +ML SP+M T+
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTY 331
Query: 307 VDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
++ + +EA + ++ V+ E+ + +D
Sbjct: 332 NTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 178 QPAMPEDADEIFKKMKETGLIP---NAVAMLDGLCKD-GLVQEALKLFGLMREKGTIPEI 233
+ +PE F KM E P + +LD L G +Q+A +LF R G +P
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNT 190
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
Y +++ + A ++F KM + P+ SY +L+QG C+ ++ A E +
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 294 MLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG----FVVNEKAVKGFLDMKK 349
ML G P+ T L+ G + E K + +I KG F V+ VKGF K
Sbjct: 251 MLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A E+FK + G++PN + ++ C + + A +LFG M E+ +P++ Y +
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ + + + A + M + G P+ L+ GLC + ++ EM+ G
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGF 287
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
SP+ + LV GF V EA + +++ G
Sbjct: 288 SPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F KM E ++P+ + ++ G C+ G V A++L M KG +P+ ++
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIG 264
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G D+ K+ +M S G SP+ LV+G C ++++A + +++ G +
Sbjct: 265 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Query: 302 NMTTF 306
+ T+
Sbjct: 325 HSDTW 329
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
I A+++ ++GL ++A ++F ++E G P++ +Y A++E Y++A A IF
Sbjct: 299 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 358
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQ 317
MQ G P+ SY ++V + DA EM G +P M + + L+ + K +
Sbjct: 359 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR 418
Query: 318 GVAEAKGAIRTLIEKG-----FVVN 337
V + + ++ + E G FV+N
Sbjct: 419 DVTKCEAIVKEMSENGVEPDTFVLN 443
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A ++F++MK P M++ K + KL+ MR P I YTA+
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 305
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V + + + A+ IF ++Q +G+ P+ + Y L++ + A E M G
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 365
Query: 300 SPNMTTFVDLVDGF 313
P+ ++ +VD +
Sbjct: 366 EPDRASYNIMVDAY 379
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 181 MPEDADEIFKKMKETGLIPNAV------AMLDGLCK-DGLVQEALKLFGLMREKGTIPEI 233
+ E A+ + +M+ + P + A ++GL K G +EA+ +F M+ P
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEF 290
Y ++ Y KA K+ + +++ +M+S+ PN +YT LV + C + ++ FE
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE- 323
Query: 291 CVEMLEAGHSPNMTTFVDLVDGF 313
++ E G P++ + L++ +
Sbjct: 324 --QLQEDGLEPDVYVYNALMESY 344
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E F K K G++P+A ++ G + A K+F M E+ + +++ Y A+++
Sbjct: 192 AQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLD 251
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K+ D ++F++M + G+ P+A+S+ + + C + A++ M P
Sbjct: 252 ALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVP 311
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
N+ TF ++ K + V +A + +I+KG
Sbjct: 312 NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++F +M E + + +A +LD LCK G V K+F M G P+ + +
Sbjct: 227 ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
Y A A ++ +M+ + PN +++ +++ LCK ++ DA+ EM++ G +P
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP 346
Query: 302 NMTTF 306
+ T+
Sbjct: 347 DTWTY 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A ++ +MK L+PN ++ LCK+ V +A L M +KG P+ Y +++
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMA 356
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ + + A ++ +M P+ +Y ++++ L + R A E M E P
Sbjct: 357 YHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYP 416
Query: 302 NMTTFVDLVDGFVKEQG-VAEAKGAIRTLIEKG 333
+ T+ ++ G V+++G + EA +I++G
Sbjct: 417 TVATYTVMIHGLVRKKGKLEEACRYFEMMIDEG 449
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Query: 181 MPEDADEIFKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+P +A F +M E G+ P + +L LC V A + FG + G +P Y+
Sbjct: 153 LPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYS 212
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+V G+ + A A+++F +M + +Y L+ LCK + ++ EM
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAI 326
G P+ +F + + V A +
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+ M+E G+ P+ V +++ G ++ +++ M E G P+I ++ + +GY
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE-AGHSPN 302
+A + + A++I +M+ G+ PN YT ++ G C ++ A + +M G SPN
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPN 706
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPS 354
+TT+ L+ GF + + +A+ ++ + K V K ++ D K S
Sbjct: 707 LTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVS 758
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 186 DEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
D I +M + PN +++G C++G ++EAL+ F M+E G P + ++ ++++G
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
+ + D + M+ G+ P+ +++ L+ ++ E +MLE G P+
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 303 MTTFVDLVDGFVK 315
+ F L G+ +
Sbjct: 636 IHAFSILAKGYAR 648
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLM-REKGTIPEIVIYTA 238
+ A +IF+KMKE+G P A ++ G K G ++E+ +L +M R++ P
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 465
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV-EMLEA 297
+V+ + K ++A I KMQS G+ P+ ++ L + + A + + ML
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG-----FVVNEKAVKGFLDM 347
PN+ T +V+G+ +E + EA + E G FV N +KGFL++
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNS-LIKGFLNI 579
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 22/184 (11%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ K+++ GL P+ + A+++ + G + +A+K+F M+E G P + +++GY
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 245 KAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K K +++ R+ M + + PN + +LVQ C ++++A+ +M G P++
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 304 TTFVDLVDGFVKEQGVAEAKGAI--RTLIEK--------GFVVN--------EKAVKGFL 345
TF L + + A+ I R L K G +VN E+A++ F
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 346 DMKK 349
MK+
Sbjct: 556 RMKE 559
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
+EI+ M E G+ P+ A + G + G ++A ++ MR+ G P +VIYT ++
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Query: 242 GYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G+ A + A ++++KM G+SPN +Y L+ G + + A E +M
Sbjct: 680 GWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVV 739
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGA 325
P T + DG+ K GV+ + A
Sbjct: 740 PTRKTMQLIADGW-KSIGVSNSNDA 763
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P++A IF + E G P+ + ++ L + L L + + G P+ +++ A
Sbjct: 335 PQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNA 394
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-EA 297
++ +++ D A +IF KM+ +G P A ++ L++G K +L+++ ML +
Sbjct: 395 IINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE 454
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
PN T LV + ++ + EA + + G
Sbjct: 455 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG 490
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
+++GL + G QEA +F + E+G P ++ YT +V T+ + K++ NG
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
+ P+ + ++ + L A + +M E+G P +TF L+ G+ K
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+FK++KE G P V +++ K G + +AL++ +M+E+G + Y+ ++ G+
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K +A +F M G+ P+ Y ++ C + A + EM + H P
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 305 TFVDLVDGFVK 315
TF+ ++ G+ K
Sbjct: 591 TFMPIIHGYAK 601
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 125/289 (43%), Gaps = 30/289 (10%)
Query: 91 YNRGSRSSRPRFDGNRGRPDDVEMTNK--SSQTDIGFQGRNMSDTNKVVNKLGDSFLDKF 148
Y R R R R R + T++ +S GR+M + V K+ + ++
Sbjct: 319 YGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMS 378
Query: 149 KLGFD------NKAGNSSEVAASNLSEEAKSANSN--------------QPAMPEDADEI 188
+ + +KAG++ AA +EAK + Q E A+ +
Sbjct: 379 LVTYSVIVGGFSKAGHAE--AADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEAL 436
Query: 189 FKKMKETGL-IPNAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTK 245
++M+E G+ P A+ M+DG ++ L +F ++E G P +V Y ++ YTK
Sbjct: 437 VREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTK 496
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
K A + R M+ G+ N +Y++++ G K +AF +M++ G P++
Sbjct: 497 VGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVIL 556
Query: 306 FVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPS 354
+ +++ F G+ AI+T+ E + + + F+ + ++ S
Sbjct: 557 YNNIISAFC---GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++DG + G V EA L M+++G P+I YT+ + +KA + A + +M++ G
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA- 322
+ PN +YT L++G + S + A EM G P+ + L+ + +AEA
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
Query: 323 --KGAI---RTLIEKGFVVN 337
G + + ++E G +V+
Sbjct: 855 IYSGVMTICKEMVEAGLIVD 874
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+F M+ G +P +++GL + +++A+++ M G YT +++GY
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
A F ++Q+ G+ + F+Y L++ CK R+Q A EM N
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ L+DG+ + V EA I+ + ++G
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEG 759
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 185 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E F +++ GL I A+L CK G +Q AL + M + +Y +++
Sbjct: 678 AFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILID 737
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
G+ + +A + ++M+ G+ P+ +YT + K + A + EM G P
Sbjct: 738 GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP 797
Query: 302 NMTTFVDLVDGFVK 315
N+ T+ L+ G+ +
Sbjct: 798 NIKTYTTLIKGWAR 811
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 15/175 (8%)
Query: 184 DADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A ++ ++MK+ G+ P+ + + K G + A + M G P I YT ++
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF------CVEM 294
+G+ +A + A + +M++ GI P+ Y L+ L + + +A+ + C EM
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEM 866
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF---VVNEKAVKGFLD 346
+EAG +M T V K + + G + ++K F + GFLD
Sbjct: 867 VEAGLIVDMGTAVHWSKCLCK---IEASGGELTETLQKTFPPDWSSHHHHHGFLD 918
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E+ + MKE G+ N M++G K A +F M ++G P++++Y ++
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ D A + ++MQ P ++ ++ G K ++ + E M G P
Sbjct: 563 AFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE----KAVKGF 344
+ TF L++G V+++ + +A + + G NE K ++G+
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 18/180 (10%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A + F ++K+TGL + V +++ C++G EA+KL G M+ + + Y +
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVI 379
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G + ++++A ++ + S G+ N SY +++ LC L+ A +F M E G
Sbjct: 380 LRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSVWEAI 359
P+ T+ +LV E G E +R LI GFL + P W A+
Sbjct: 440 WPHHATWNELVVRLC-ESGYTEI--GVRVLI------------GFLRIGLIPGPKSWGAV 484
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 183 EDADEIFKKM-KETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
++A E+F+ M + G+ P+ V M++G C+ G V+ A K+ M++ G P + Y+A
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ G+ K K +AK+ F +++ G+ + YT L+ C+ +A + EM +
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 299 HSPNMTTFVDLVDGFVKE---------------QGVAEAKGAIRTLIEKGFVVN---EKA 340
+ T+ ++ G E +GV KG+ R +I N EKA
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYR-IILNALCCNGELEKA 427
Query: 341 VK 342
VK
Sbjct: 428 VK 429
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 196 GLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKG-TIPEIVIYTAVVEGYTKAHKADD 251
GL PN ++ CK+G + A + M+ G + P + Y+ +++ ++ +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 252 AKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLV 310
A +F M S GISP+ ++ V++ G C+ ++ A + M + G +PN+ + L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 311 DGFVKEQGVAEAK 323
+GF K + EAK
Sbjct: 311 NGFCKVGKIQEAK 323
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
I A+++ ++GL ++A ++F ++E G P++ +Y A++E Y++A A IF
Sbjct: 321 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 380
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQ 317
MQ G P+ SY ++V + DA EM G +P M + + L+ + K +
Sbjct: 381 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR 440
Query: 318 GVAEAKGAIRTLIEKG-----FVVN 337
V + + ++ + E G FV+N
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVLN 465
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A ++F++MK P M++ K + KL+ MR P I YTA+
Sbjct: 268 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V + + + A+ IF ++Q +G+ P+ + Y L++ + A E M G
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 387
Query: 300 SPNMTTFVDLVDGF 313
P+ ++ +VD +
Sbjct: 388 EPDRASYNIMVDAY 401
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 181 MPEDADEIFKKMKETGLIPNAV------AMLDGLCK-DGLVQEALKLFGLMREKGTIPEI 233
+ E A+ + +M+ + P + A ++GL K G +EA+ +F M+ P
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 234 VIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCK---CSRLQDAFEF 290
Y ++ Y KA K+ + +++ +M+S+ PN +YT LV + C + ++ FE
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE- 345
Query: 291 CVEMLEAGHSPNMTTFVDLVDGF 313
++ E G P++ + L++ +
Sbjct: 346 --QLQEDGLEPDVYVYNALMESY 366
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E F++M +TGL+P+ V A+LD K G V+E L L+ G P+ + ++ + +
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ +A D + + ++M+S + PN Y L++ + + + A EMLEAG +P
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 302 NMTTFVDLVDGFVKEQGVAEA 322
N T LV + K + +A
Sbjct: 360 NEKTLTALVKIYGKARWARDA 380
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 213 LVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT 272
L +A++ F M + G +P+ V Y+A+++ Y+K+ K ++ ++ + + G P+A +++
Sbjct: 236 LYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFS 295
Query: 273 VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
VL + + EM PN+ + L++ + A+ ++E
Sbjct: 296 VLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEA 355
Query: 333 GFVVNEKAVKGFLDM--KKPFSP---SVWEAIFGKKAP 365
G NEK + + + K ++ +WE + KK P
Sbjct: 356 GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWP 393
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
AD + K+M GL P+ + +M++G C G + +A +L M + + V Y+ ++E
Sbjct: 184 ADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILE 243
Query: 242 GYTKAHKADDAKRIFRKMQSNG----ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
G K+ + A + +M+ ISPNA +YT+++Q C+ R+++A M
Sbjct: 244 GVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNR 303
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
G PN T L+ G ++ E A+ LI+K
Sbjct: 304 GCMPNRVTACVLIQGVLEND---EDVKALSKLIDK 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 176 SNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPE 232
NQ + ++A + +K E + + VA ++ G + A L M G P+
Sbjct: 140 CNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPD 199
Query: 233 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 292
++ YT+++ GY A K DDA R+ ++M + N+ +Y+ +++G+CK ++ A E
Sbjct: 200 VITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLA 259
Query: 293 EM-LEAGH---SPNMTTFVDLVDGFVKEQGVAEA 322
EM E G SPN T+ ++ F +++ V EA
Sbjct: 260 EMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEA 293
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 181 MPEDADEIFKKMKETGLIPNAVAMLDG---------LCKDGLVQEALKLFGLMREKGTIP 231
+P A EI++ M++T ++LDG L K G + A KLF M+E+ P
Sbjct: 293 LPYKAFEIYESMEKTD------SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRP 346
Query: 232 EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 291
+++++V+ KA + D + +++ +MQ G P+A + L+ K +L A
Sbjct: 347 SFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLW 406
Query: 292 VEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
EM ++G PN + +++ K + A + + + GF+ L+M
Sbjct: 407 DEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEM 462
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 187 EIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+++ +M+ G P+A V+++D K G + AL+L+ M++ G P +YT ++E +
Sbjct: 369 KVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESH 428
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
K+ K + A +F+ M+ G P +Y+ L++ ++ A + M AG P +
Sbjct: 429 AKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGL 488
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
++++ L+ ++ V A + + G+ V+
Sbjct: 489 SSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 183 EDADEIFKKMKETGL-----IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
E A FKK +E+G N + ML GL +A +++ M + ++ + Y
Sbjct: 260 EVAFCCFKKAQESGCKIDTQTYNNLMML--FLNKGLPYKAFEIYESMEKTDSLLDGSTYE 317
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++ K+ + D A ++F++M+ + P+ ++ LV + K RL + + +EM
Sbjct: 318 LIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGF 377
Query: 298 GHSPNMTTFVDLVDGFVK 315
GH P+ T FV L+D + K
Sbjct: 378 GHRPSATMFVSLIDSYAK 395
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+ A ++ +MK++G PN +++ K G ++ A+ +F M + G +P Y+ +
Sbjct: 400 DTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCL 459
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+E + + + D A +I+ M + G+ P SY L+ L + A + +EM G+
Sbjct: 460 LEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGY 519
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
S ++ D++ ++K+ V A +R + G N ++ +
Sbjct: 520 SVDVCA-SDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFE 565
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 184 DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
DA ++F E LI +L + GL EAL+LF M+ +G P ++ + ++
Sbjct: 428 DAKKVFDSTVEKDLILWN-TLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL 486
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
+ + D+AK +F +MQS+GI PN S+T ++ G+ + ++A F +M E+G PN
Sbjct: 487 LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+ + +A +F M+ G+ PN + ++ L ++G V EA +F M+ G IP ++
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLI 512
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRL 284
+T ++ G + +++A RKMQ +G+ PNAFS TV L C+ L
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV---ALSACAHL 559
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
I A ++D K G + +A K+F EK +++++ ++ Y ++ + +A R+F
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLFY 465
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQ 317
MQ G+ PN ++ +++ L + ++ +A + ++M +G PN+ ++ +++G V+
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 318 GVAEAKGAIRTLIEKGF 334
EA +R + E G
Sbjct: 526 CSEEAILFLRKMQESGL 542
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
+P +P+ A E+F++M + G P+ V M+D LCK G V EAL + M P
Sbjct: 250 EPNLPK-AREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
IY+ +V Y ++ ++A F +M+ +G+ + + L+ CK +R+++ + EM
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 295 LEAGHSPN 302
G +PN
Sbjct: 369 KSKGVTPN 376
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A F M++ L PN VA +L LCK V++A ++F MR++ T P+ Y+ +
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT-PDSKTYSIL 243
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+EG+ K A+ +FR+M G P+ +Y+++V LCK R+ +A M +
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 300 SPNMTTFVDLVDGFVKEQGVAEA 322
P + LV + E + EA
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEA 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 167 LSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGL 223
LS KS N + A E+F+ M++ P++ +L+G K+ + +A ++F
Sbjct: 210 LSALCKSKNVRK------AQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFRE 262
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
M + G P+IV Y+ +V+ KA + D+A I R M + P F Y+VLV +R
Sbjct: 263 MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENR 322
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKG 343
L++A + +EM +G ++ F L+ F K + ++ + KG N K+
Sbjct: 323 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 382
Query: 344 FL 345
L
Sbjct: 383 IL 384
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ K+MK G+ PN+ + +L L + G EA +F M K P+ YT V++ +
Sbjct: 364 VLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFC 422
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ + + A ++++ M+ G+ P+ +++VL+ GLC+ Q A EM+E G P+
Sbjct: 423 EKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEK-GFVVNE 338
TF L +KE E + ++ L EK +VNE
Sbjct: 483 TFGRLRQLLIKE----EREDVLKFLNEKMNVLVNE 513
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 220 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 279
L MR+K + + + V+ Y +A K D+A F M+ + PN ++ L+ LC
Sbjct: 156 LINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALC 214
Query: 280 KCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
K ++ A E E + +P+ T+ L++G+ KE + +A+ R +I+ G
Sbjct: 215 KSKNVRKAQEV-FENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG 267
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+++K+M G + N ++ CK+ + EAL +F M + G P +V + +++G
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 244 TKAHKADDAKRIFRKM---QSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
K A ++ KM N +SPNA +Y ++ G CK RL A +M+++G
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
N T+ LVD + + EA + KG VVN
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVN 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 71/144 (49%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A++D + G EAL+L M KG + VIY ++V + A + R M S
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
+ + F+ ++V+GLC+ +++A EF ++ E ++ L+ FV+++ +A A
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 323 KGAIRTLIEKGFVVNEKAVKGFLD 346
+ +++ +G ++ + +D
Sbjct: 451 DQILGSMLVQGLSLDAISFGTLID 474
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 219 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 278
K++ M G + + + V+ + K K +A +F +M G+ PN S+ +++ G
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 279 CKCSRLQDAFEFCVEM-LEAGH--SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
CK ++ A + +M + +G+ SPN T+ +++GF K + A+ +++ G
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 336 VNEKAVKGFLD 346
NE+ +D
Sbjct: 324 CNERTYGALVD 334
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
AD+I M GL +A++ ++DG K+G ++ AL+++ M + +VIY ++V
Sbjct: 450 ADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVN 509
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM--LEAGH 299
G +K A A+ + M+ I +Y L+ K +++A + +M +
Sbjct: 510 GLSKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTGNVEEADDILSKMQKQDGEK 565
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
S ++ TF +++ K +AK ++ ++E+G V
Sbjct: 566 SVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVV 601
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++ GLC+ G ++ AL+L ++ + P ++ ++ ++ G+ K ++A ++ +M+
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
I P+ ++ +L+ GL K R+++ + M G PN T+ +++ G + ++ EAK
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 324 GAIRTLIEKG----FVVNEKAVKGFLDMK 348
+ +I G F+ +K V G + K
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETK 356
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 7/207 (3%)
Query: 129 NMSDTNKVVNKLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEI 188
N+ + K+ +++ F+ KLG + A N+ + + N A + DE
Sbjct: 175 NLLVSAKLFDEIHKIFVSAPKLGVEIDA------CCLNILIKGLCESGNLEAALQLLDE- 227
Query: 189 FKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 248
F + K + ++ G C G +EA KL M ++ P+ + + ++ G K +
Sbjct: 228 FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGR 287
Query: 249 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVD 308
++ + +M+ G PN +Y ++ GL R +A E +M+ G P+ ++
Sbjct: 288 VEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKK 347
Query: 309 LVDGFVKEQGVAEAKGAIRTLIEKGFV 335
+V G + + V E +R ++ GFV
Sbjct: 348 MVLGLCETKSVVEMDWVLRQMVNHGFV 374
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+A ++ ++M++ + P+ + ++ GL K G V+E + L M+ KG P Y V
Sbjct: 254 EEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEV 313
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G + +AK + +M S G+ P+ SY +V GLC+ + + +M+ G
Sbjct: 314 LYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Query: 300 SPNMTTFVDLVDGFV 314
P + +V V
Sbjct: 374 VPKTLMWWKVVQCVV 388
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 69/131 (52%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
L LC+ G + A+K++ ++ ++ + ++A+++ + K + A +F++
Sbjct: 424 VYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILE 483
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
+ SYTV ++GL + R+++A+ C +M E G PN T+ ++ G KE+ +
Sbjct: 484 KYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKV 543
Query: 323 KGAIRTLIEKG 333
+ +R I++G
Sbjct: 544 RKILRECIQEG 554
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ K+M G PN +L C+ G V EA ++ GLM G + +++ +V G+
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
++ + A +F KM G SPN +YT L++G + +AF ++ G +P++
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
++ + + EA+ +L ++ V
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLV 349
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 182 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P+ A ++F KM + G PN V +++ G G+V EA + ++ +G P+IV+
Sbjct: 263 PQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNL 322
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 279
++ YT+ + ++A+++F ++ + P+ +++ ++ LC
Sbjct: 323 MIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 200 NAVAML-DGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRK 258
N +ML G + G Q+A+ LF M + G P +V YT++++G+ D+A + K
Sbjct: 248 NVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSK 307
Query: 259 MQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLV 310
+QS G++P+ +++ + R ++A + + + P+ TF ++
Sbjct: 308 VQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASIL 359
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 183 EDADEIFKKMKE-TGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
E + I+++M+E G PN + +++ C GL+ EA K++ M+ +G + +IV Y
Sbjct: 262 EMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNT 321
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ G + AK +FR M GI +Y LV G CK + EM G
Sbjct: 322 MIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKG 381
Query: 299 HSPNMTTFVDLVDGFVKE---QGVAEAKGAIRTLIEKGF 334
+ T LV+G + Q V EA ++ + +
Sbjct: 382 FEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAM 420
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 199 PNAV---AMLDGLCKDGLVQEALKLFGLMREK-GTIPEIVIYTAVVEGYTKAHKADDAKR 254
PNA +M+ ++G + +++ M E+ G P + Y ++E Y +A++
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 255 IFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFV 314
++ +M+ G+ + +Y ++ GLC + A E +M G T+ LV+G+
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 315 KEQGVAEAKGAIRTLIEKGF----VVNEKAVKGFLD 346
K V R + KGF + E V+G D
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCD 398
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 176 SNQPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKL-FGLMREKGTIP 231
+Q +DA ++F +M + + P V ++ GLCKD V+EALK+ +++ G P
Sbjct: 162 CSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRP 221
Query: 232 EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 291
+ IY ++++ + + A ++ + I +A Y+ L+ L K R +
Sbjct: 222 TVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMIL 281
Query: 292 VEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF---VVNEKAVKG-FLDM 347
EM E G P+ T+ L++GF E A + ++EKG V++ + G F +
Sbjct: 282 EEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRI 341
Query: 348 KKPFSPSVWE 357
KK WE
Sbjct: 342 KK------WE 345
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 66/143 (46%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++ L K G E + M EKG P+ V Y ++ G+ + ++ A R+ +M
Sbjct: 263 TLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEK 322
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G+ P+ SY +++ + + ++A +M G SP+ ++ + DG + EA
Sbjct: 323 GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Query: 323 KGAIRTLIEKGFVVNEKAVKGFL 345
+ ++ KG+ ++GFL
Sbjct: 383 AVILDEMLFKGYKPRRDRLEGFL 405
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 231 PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
P+ Y ++ G +++ DDA ++F +M + P ++ L+ GLCK SR+++A +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 291 CVEMLEA-GHSPNMTTFVDLVDGFVK 315
+ML+ G P + + L+ +
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQ 235
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 187 EIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E +KKM G+ + + +D +CK G +A+KL+ M+ + ++V Y V+
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ + R+FR+M+ G PN ++ +++ LC+ R++DA+ EM + G P+
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 304 TTFVDL 309
T++ L
Sbjct: 330 ITYMCL 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+F++M+E G PN ++ LC+DG +++A ++ M ++G P+ + Y + ++
Sbjct: 281 VFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FS 337
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ K + +F +M +G+ P +Y +L++ + LQ M E+G +P+
Sbjct: 338 RLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSA 397
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ ++D +++ + A+ +IE+G
Sbjct: 398 AYNAVIDALIQKGMLDMAREYEEEMIERGL 427
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 181 MPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
MP DA ++F +M + +I + ++ G K+G + EA K+F LM E+ +V +TA+V
Sbjct: 63 MPRDARKLFDEMPDRNII-SWNGLVSGYMKNGEIDEARKVFDLMPERN----VVSWTALV 117
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY K D A+ +F KM N S+TV++ G + R+ DA + EM+ +
Sbjct: 118 KGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKL-YEMIPDKDN 172
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGF 344
T+ ++ G KE V EA+ + E+ + V G+
Sbjct: 173 IARTS---MIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGY 213
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+M+ GLCK+G V EA ++F M E+ ++ +T +V GY + ++ DDA++IF M
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERS----VITWTTMVTGYGQNNRVDDARKIFDVMPEK 232
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEF 290
S+T ++ G + R++DA E
Sbjct: 233 ----TEVSWTSMLMGYVQNGRIEDAEEL 256
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 182 PEDADEIFKKMKETGLIP---NAVAMLDGLCKDGLVQEALKLFGLMREKG---TIPEIVI 235
P+ A ++ ++M E G P A +D C+ G+V EA LF M KG + P
Sbjct: 284 PKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKT 343
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML 295
+ ++ K KA++ + +M S G P+ +Y +++G+C ++ +A++F EM
Sbjct: 344 FALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 296 EAGHSPNMTTF 306
G+ P++ T+
Sbjct: 404 NKGYPPDIVTY 414
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNA------VAMLDGLCKDGLVQEALKLFGLMREKGTIP 231
Q M ++A ++F M G +A M+ L K+ +E +L G M G +P
Sbjct: 315 QAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLP 374
Query: 232 EIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFC 291
++ Y V+EG A K D+A + +M + G P+ +Y ++ LC+ + +A +
Sbjct: 375 DVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY 434
Query: 292 VEMLEAGHSPNMTTFVDLVDGF 313
M+E+ +P++ T+ L+ F
Sbjct: 435 GRMVESRCAPSVQTYNMLISMF 456
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 37/168 (22%)
Query: 204 MLDGLCKDGLVQE----------------------------------ALKLFGLMREKGT 229
+LD LCK GLV+E A+KL M E G
Sbjct: 240 LLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGH 299
Query: 230 IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGIS---PNAFSYTVLVQGLCKCSRLQD 286
PE Y A ++ + +A D+A +F M + G + P A ++ +++ L K + ++
Sbjct: 300 KPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEE 359
Query: 287 AFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
FE M+ G P+++T+ D+++G + V EA + + KG+
Sbjct: 360 CFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ E+ +M TG +P+ +++G+C V EA K M KG P+IV Y
Sbjct: 358 EECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCF 417
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + K D+A +++ +M + +P+ +Y +L+ + AF EM +
Sbjct: 418 LRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDC 477
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
++ T+ +++G EA + ++ KG + + FL
Sbjct: 478 VQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 229 TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAF 288
T PEI + +++ K + + + R+M+ + + P+A ++ VL G C+ + A
Sbjct: 230 TQPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAM 288
Query: 289 EFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
+ EM+EAGH P T+ +D F + V EA +I KG V+ K F M
Sbjct: 289 KLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 347
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ +F+ M GL PN V A++ G+ AL + G +++ G IP++V YT +
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y ++ + AK +F M+ PN +Y L+ L +A E +M + G
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 300 SPNMTTFVDLV 310
PN+ + L+
Sbjct: 457 KPNVVSVCTLL 467
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++L K G V EA +F M+ G P+++ YT+++ Y + K A +F +M++N
Sbjct: 570 SVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 629
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLV 310
GI P++ + CS L AF + G N+ +DL+
Sbjct: 630 GIEPDSIA----------CSALMRAFN------KGGQPSNVFVLMDLM 661
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 182 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV---- 234
P A E+F M++ PN V A++D +G + EA+++F M + G P +V
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 465
Query: 235 -------------------------------IYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
Y + + Y A + + A +++ M+
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 525
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
+ ++ ++T+L+ G C+ S+ +A + EM + + ++ + K+ V EA+
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%)
Query: 212 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSY 271
G ++ +F M +G P IV Y A++ Y + A + ++ NGI P+ SY
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 272 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
T L+ + + A E + M + PN+ T+ L+D + +AEA R + +
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 332 KGFVVNEKAVKGFL 345
G N +V L
Sbjct: 454 DGIKPNVVSVCTLL 467
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 183 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ ++I+ +M E + I + A L GL + +E + LF ++ P++ +TA+
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++G+ K D+A +++++ NG P F + L+ +CK L+ A+E C E+
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Query: 300 SPNMTTFVDLVDGFVK 315
+ ++VD VK
Sbjct: 349 LVDEAVLQEVVDALVK 364
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 3/175 (1%)
Query: 176 SNQPAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPE 232
+ Q +P+ A E F+KM G P+ V AM+D + G V AL L+ R + +
Sbjct: 220 ARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRID 279
Query: 233 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 292
V ++ ++ Y + D I+ +M++ G+ PN Y L+ + + R A
Sbjct: 280 AVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYK 339
Query: 293 EMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDM 347
+++ G +PN +T+ LV + + + +A R + EKG + L M
Sbjct: 340 DLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSM 394
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
I+++MK G+ PN V ++D + + +A ++ + G P Y A+V Y
Sbjct: 302 IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYG 361
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD-AFEFCVEMLEAGHS-PN 302
+A DDA I+R+M+ G+S Y L+ +C +R D AFE +M P+
Sbjct: 362 RARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCETCDPD 420
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
TF L+ + V+EA+ A+ + E GF
Sbjct: 421 SWTFSSLITVYACSGRVSEAEAALLQMREAGF 452
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 13/275 (4%)
Query: 71 EPIPNRALRGTQPVNPHSREYNRGSRSSRPRFDGNRGRPDDVEMTNKSSQTDI--GFQGR 128
EP +++ P +P + + R S SR D N++ D+ GF G+
Sbjct: 80 EPTASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLDACKPNEADVCDVITGFGGK 139
Query: 129 NMSDTNKVVNKLGDSFLDKFKLGFDNKAGN---SSEVAASNLSEEAKSANSNQPAMPEDA 185
+ + + VV + + L +N S EV N++ + + + E +
Sbjct: 140 -LFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDL----EKS 194
Query: 186 DEIFKKMKETGLIP-NAVAMLDGLC--KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
+++F +M E G+ P NA C ++G+ + A++ F M G P+ V A+++
Sbjct: 195 EKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDA 254
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
Y +A D A ++ + ++ +A +++ L++ EM G PN
Sbjct: 255 YGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPN 314
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+ + L+D + + +AK + LI GF N
Sbjct: 315 LVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPN 349
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Query: 184 DADEIFKKMKE-TGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
+A + K M+E G+ PN V +++ LCK +EA ++F M EKG P I Y A
Sbjct: 355 EARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAF 414
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ ++ + KM+ G P +Y +L++ LC+ + EM E
Sbjct: 415 MR---ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTV 471
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
P++++++ ++ G + EA G + + +KG NE
Sbjct: 472 GPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE 510
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 16/217 (7%)
Query: 132 DTNKVVNKLGDSFLDKFKLGFDN-KAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFK 190
D K +N K ++G D+ ++ S+ N+S+ N+ P DA
Sbjct: 212 DVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSF-- 269
Query: 191 KMKETGLIPNAVAMLDGLCK-DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKA 249
N V L+G C G +EA +++ M G ++V Y++++ Y+K
Sbjct: 270 ---------NIV--LNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSL 318
Query: 250 DDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM-LEAGHSPNMTTFVD 308
+ ++F +M+ I P+ Y +V L K S + +A M E G PN+ T+
Sbjct: 319 NKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNS 378
Query: 309 LVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
L+ K + EAK ++EKG + F+
Sbjct: 379 LIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM 415
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 185 ADEIFKKMKETGLIPNAVAMLDGLCK---DGL-VQEALKLFGLMREKGTIPEIVIYTAVV 240
A EI+++M +G +P ++ + + GL + +A+++F R G + IYT ++
Sbjct: 793 ASEIYERMHTSG-VPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMI 851
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA-GH 299
Y K K +A +F +MQ GI P SY ++V+ +C SRL + ++ +E G
Sbjct: 852 MHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGR 910
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+++T++ L+ + + AEA+ I + EKG
Sbjct: 911 CTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+++ +M E G+ PN ++ K G +EALK FG M+ G +PE V Y++V+
Sbjct: 279 DLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLS 338
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
KA + A ++ M+S GI P+ ++ ++ K A +M
Sbjct: 339 VKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 3/154 (1%)
Query: 185 ADEIFKKMKETGLIPNAVAMLDGLC---KDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A+E F +M E G P+AVA LC + G L + ++E+ + +Y ++
Sbjct: 207 AEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLS 266
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K ++ +M G+ PN F+YT++V K ++A + EM G P
Sbjct: 267 SLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVP 326
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
T+ ++ VK +A G + +G V
Sbjct: 327 EEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV 360
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 203 AMLDGLCKD----GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRK 258
A+ DG+ + G EA ++ MR G P+ + Y+ +V G KA + ++A+ + +
Sbjct: 371 AVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQ 430
Query: 259 MQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF----- 313
M++ G P+ ++T+L+QG CK + L A MLE G + L+DGF
Sbjct: 431 MEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNK 490
Query: 314 -----------VKEQGVAEAKGAIRTLIEKGFVV--NEKAVKGFLDMKKPFSPSVWEAIF 360
VK V + + LI+K + +E+A+ MKK P+ EA
Sbjct: 491 FEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFD 550
Query: 361 GKKA 364
G A
Sbjct: 551 GYLA 554
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ +F+ M GL PN V A++ G+ AL + G +++ G IP++V YT +
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 264
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y ++ + AK +F M+ PN +Y L+ L +A E +M + G
Sbjct: 265 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 300 SPNMTTFVDLV 310
PN+ + L+
Sbjct: 325 KPNVVSVCTLL 335
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++L K G V EA +F M+ G P+++ YT+++ Y + K A +F +M++N
Sbjct: 438 SVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 497
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLV 310
GI P++ + CS L AF + G N+ +DL+
Sbjct: 498 GIEPDSIA----------CSALMRAFN------KGGQPSNVFVLMDLM 529
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 182 PEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIV---- 234
P A E+F M++ PN V A++D +G + EA+++F M + G P +V
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 333
Query: 235 -------------------------------IYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
Y + + Y A + + A +++ M+
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 393
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
+ ++ ++T+L+ G C+ S+ +A + EM + + ++ + K+ V EA+
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%)
Query: 212 GLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSY 271
G ++ +F M +G P IV Y A++ Y + A + ++ NGI P+ SY
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 272 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
T L+ + + A E + M + PN+ T+ L+D + +AEA R + +
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 332 KGFVVNEKAVKGFL 345
G N +V L
Sbjct: 322 DGIKPNVVSVCTLL 335
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 26/193 (13%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
EIF+KM E G+ + ++ C +GL +EAL + M +KG ++Y +++ Y
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQ-DAFEFCV-EMLEAGHSP 301
K++ ++ + +F +M+ G+ P+A +Y +L+ + R+Q D E + EM + G P
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYAR--RMQPDIVETLLREMEDLGLEP 447
Query: 302 NMTTFVDLVDGF----------------VKEQGVAEAKGAIRTLIEKGFV--VNEKAVKG 343
N+ ++ L+ + +K+ G+ + + LI V +EKA
Sbjct: 448 NVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 344 FLDM-KKPFSPSV 355
F +M K+ PSV
Sbjct: 508 FEEMCKEGIKPSV 520
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+ E+A I +M++ G+ N + ++D K ++E LF MR+KG P Y
Sbjct: 359 LKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN 418
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD-AFEFCVEMLE 296
+++ Y + + D + + R+M+ G+ PN SYT L+ + ++ D A + + M +
Sbjct: 419 ILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKK 478
Query: 297 AGHSPNMTTFVDLVDGF 313
G P+ ++ L+ +
Sbjct: 479 VGLKPSSHSYTALIHAY 495
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 192 MKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHK 248
MKE G P +++ K+ +++ L+ M + P +V YTA++ GY K
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 249 ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVD 308
++A FR M+ G SP+ +Y+ + LC+ + +DA + EML+ G +P+ F
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 309 LVDGFVKE 316
+ G +E
Sbjct: 1000 VFYGLNRE 1007
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 219 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 278
+L M + G +I +T ++ Y KA K +F KM+ +G +A +Y ++++ L
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 279 CKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGV 319
C R A EF EM+E G + + T+ L+D K + V
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKV 310
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A E+ +++K + +A ++ GLC+ + +AL++ +M+ + + + +Y +
Sbjct: 346 KEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRR-KLDDSNVYGII 404
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ GY + + A F ++ +G P +YT ++Q L K + + EM+E G
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
P+ +V G + + VAEA ++ EKG
Sbjct: 465 EPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 185 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A E F+ +K++G P ++ L K ++ LF M E G P+ V TAVV
Sbjct: 417 ALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVA 476
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
G+ ++ +A ++F M+ GI P SY++ V+ LC+ SR + + +M
Sbjct: 477 GHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 184 DADEIFKKMKETGLIPNAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
DA EI MK L + V ++ G + V +AL+ F ++++ G P + YT +++
Sbjct: 382 DALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQ 441
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
K + + +F +M NGI P++ + T +V G +R+ +A++ M E G P
Sbjct: 442 HLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKP 501
Query: 302 NMTTFVDLVDGFVKE 316
++ FVKE
Sbjct: 502 TWKSY----SIFVKE 512
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 179 PAMPEDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVI 235
+ +DA+ + +M++ G+ P+A+ ++ G G ++AL + G M+EKG P +V
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE---FCV 292
+TA+ G +K +A ++F KMQ G+ PNA + + L++ L S L E FC+
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++ GL L+++A L M ++G P+ + + ++ GY K + A + KM+
Sbjct: 296 SLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK 355
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLV 310
G++PN S+T + G K ++A + ++M E G PN T L+
Sbjct: 356 GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 103/263 (39%), Gaps = 70/263 (26%)
Query: 128 RNMSDTNKVVNKLGDSFLDKFKLGF-DNKAGNSSEVAASNLSEEAKSANS-----NQPAM 181
RN+S N +++ KLG+ D+ G E+ L + + NS +
Sbjct: 153 RNLSSWNSILSSYT-------KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGL 205
Query: 182 PEDADEIFKKMKETGLIPN---------AVA----------------------------- 203
+DA + K+M+ GL P+ AVA
Sbjct: 206 SKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETT 265
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++D K G + A +F +M K IV + ++V G + A DA+ + +M+ G
Sbjct: 266 LIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEG 321
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDG----------- 312
I P+A ++ L G + + A + +M E G +PN+ ++ + G
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 381
Query: 313 --FVK--EQGVAEAKGAIRTLIE 331
F+K E+GV + TL++
Sbjct: 382 KVFIKMQEEGVGPNAATMSTLLK 404
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 182 PEDADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI------- 230
P++A +IF +M + L P+ A + L + GL++E LK+ MR+K T
Sbjct: 271 PQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQ 330
Query: 231 --------PEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCS 282
P++V+Y A++ + +F +++ NG+ PN +Y + ++ + +
Sbjct: 331 KNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESG 390
Query: 283 RLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
+ +F +M +G +P T+ LV +E + EA A+R + +KG +
Sbjct: 391 KFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVI 443
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
M+ K L ++AL LF M+ +GT P+ Y ++ + D+A+RI +M +G
Sbjct: 521 MIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG 580
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
P +Y ++ + L DA + M + G PN + L++GF + V EA
Sbjct: 581 CKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAI 640
Query: 324 GAIRTLIEKGFVVNEKAVKGFL 345
R + E G N + +
Sbjct: 641 QYFRMMEEHGVQSNHIVLTSLI 662
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 7/176 (3%)
Query: 151 GFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAV---AMLDG 207
G N +G ++V N+ +A + + E A +FK MK G P+ ++
Sbjct: 504 GKRNMSGQRNDVLEYNVMIKAY----GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQM 559
Query: 208 LCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPN 267
L LV EA ++ M + G P Y A++ Y + DA ++ M+ G+ PN
Sbjct: 560 LAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPN 619
Query: 268 AFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
Y L+ G + +++A ++ M E G N L+ + K + EA+
Sbjct: 620 EVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 139 KLGDSFLDKFKLGFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLI 198
KL + L FK G N+ E ++L + + + ++A I +M ++G
Sbjct: 529 KLHEKALSLFK-GMKNQGTWPDECTYNSLFQMLAGVD-----LVDEAQRILAEMLDSGCK 582
Query: 199 PNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRI 255
P AM+ + GL+ +A+ L+ M + G P V+Y +++ G+ ++ ++A +
Sbjct: 583 PGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQY 642
Query: 256 FRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
FR M+ +G+ N T L++ K L++A +M ++ P++ ++
Sbjct: 643 FRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCAD 702
Query: 316 EQGVAEAKGAIRTLIEKG 333
V+EA+ L EKG
Sbjct: 703 LGIVSEAESIFNALREKG 720
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Query: 183 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++ ++ + M E G+ + M+ LCK EA L + P V Y+ +
Sbjct: 234 DEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLL 293
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ D+A +F M NG P++ Y L+ LCK + A C E +E
Sbjct: 294 IHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNW 353
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
P+ + LV+G V EAK I + EK
Sbjct: 354 VPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 183 EDADEIFKKM-KETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
++A+ ++ +M K G+ P+ M+ LC+ G + + M K P +
Sbjct: 163 KEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGL 222
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
+++G+ K K D+ +++ R M G+ +Y +++Q LCK + +A ++
Sbjct: 223 MIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCR 282
Query: 299 HSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
PN T+ L+ GF E+ + EA ++ G+
Sbjct: 283 MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGY 318
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 3/162 (1%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
I +M+ + P A + M+DG K+ E K+ +M E G + Y +++
Sbjct: 204 IVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K K+ +AK + + S + PN+ +Y++L+ G C L +A M+ G+ P+
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ L+ K A R +EK +V + +K ++
Sbjct: 324 CYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVN 365
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
Query: 181 MPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+ E+A +F K+KE + P+ + M+ G C G + EA KL+ LM ++G +I
Sbjct: 196 LVEEAKFVFIKLKEF-IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGK 254
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
++E K ++ D+A ++F M S G + Y V++ LCK R+ A + EM E
Sbjct: 255 KIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRE 314
Query: 297 AGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKK 349
G + T+ L+ G + ++ V EA G + + + +KG + +K+
Sbjct: 315 RGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKR 367
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 183 EDADEIFKKM--------KETGLIPNAVA--------MLDGLCKDGLVQEALKLFGLMR- 225
E ++FKK+ E L+P A ++ G K+G V + ++ MR
Sbjct: 383 EGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRR 442
Query: 226 --EKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
++ + P+ V YT VV + A D A+++ +M G+ N +Y VL++G CK +
Sbjct: 443 QDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQ 502
Query: 284 LQDAFEFCVEMLE-AGHSPNMTTFVDLVDGFV 314
+ A + EM E AG P++ ++ ++DG +
Sbjct: 503 IDRAEDLLREMTEDAGIEPDVVSYNIIIDGCI 534
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
Query: 185 ADEIFKKMKE-TGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
A+++ ++M E G+ P+ V+ ++DG AL F MR +G P + YT ++
Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 241 EGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + + + A R+F +M ++ + + ++ +LV+G C+ ++DA M E G
Sbjct: 566 KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA 340
PN+ T+ L +G + + +A + + E+ V ++A
Sbjct: 626 YPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEA 666
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 183 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E +EI+ KM E + I A L GL + +E + LFG ++ G P++ + A+
Sbjct: 232 ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM 291
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G K D+A+ ++++ +G P+ ++ +L+ +CK + A E E +
Sbjct: 292 IRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRY 351
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIR 327
TT LVD VK EA+ ++
Sbjct: 352 LVGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 188 IFKKMKETGLIPNAVAMLDGLCKDGL-----------VQEALK--------LFGLMREKG 228
+ K + E +P AVA+LD + GL + LK ++ M EK
Sbjct: 186 LIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKN 245
Query: 229 TIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAF 288
+I Y A + G K+ + +F +++++G+ P+ FS+ +++G ++ +A
Sbjct: 246 VAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAE 305
Query: 289 EFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
+ E+++ G+ P+ TF L+ K A + K ++V + ++ +D
Sbjct: 306 AWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVD 363
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 173 SANSNQPAMPEDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGT 229
SA N+ + + + +K G +P+ V + ++ LC +G V EAL++ + KG
Sbjct: 256 SAYCNEQKLIQSM-VLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG 314
Query: 230 IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFE 289
++V +V+GY K A+R F +M+ G PN +Y +L+ G C L A +
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 290 FCVEMLEAGHSPNMTTFVDLVDGF 313
+M N TF L+ G
Sbjct: 375 TFNDMKTDAIRWNFATFNTLIRGL 398
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 34/164 (20%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMRE-------------- 226
D ++ + MK +G+ PNAV +L LCK+G V A L M+E
Sbjct: 200 DGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYC 259
Query: 227 -----------------KGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 269
G +P++V T V+E + +A + +++S G +
Sbjct: 260 NEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVV 319
Query: 270 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF 313
+ LV+G C +++ A F +EM G+ PN+ T+ L+ G+
Sbjct: 320 ACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGY 363
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
EDA E KM++ L P AV L LC+ G + + + M +G +P I++ +
Sbjct: 442 EDALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCL 499
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y++ K +++ + M + G P + ++ ++ G CK ++ + +F +M E G
Sbjct: 500 IHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGC 559
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
P+ ++ L++ + + +A ++EK V
Sbjct: 560 VPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 87/185 (47%), Gaps = 19/185 (10%)
Query: 186 DEIFKKMKE----TGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
D +++ + E GL P+ V ++ G + L++ + + L+ + G P + ++ +
Sbjct: 93 DTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNS 152
Query: 239 VVEGYTKAHKADDAKRIF-RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
+++ K D A+ F RKM ++GI + ++Y +L++GL +R+ D F+ M +
Sbjct: 153 ILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTS 211
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE----------KGFVVNEKAVKGFLDM 347
G +PN + L+ K V A+ + + E + +K ++ + +
Sbjct: 212 GVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLL 271
Query: 348 KKPFS 352
+K FS
Sbjct: 272 EKCFS 276
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 224 MREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR 283
M G ++ Y +++G + ++ D ++ + M+++G++PNA Y L+ LCK +
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 284 LQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
+ A EM E PN TF L+ + EQ + ++ + GFV
Sbjct: 233 VGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFV 280
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A E+ ++++ G + VA ++ G C G ++ A + F M KG +P + Y ++
Sbjct: 301 EALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLI 360
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE---A 297
GY D A F M+++ I N ++ L++GL R D + +EM++
Sbjct: 361 AGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKI-LEMMQDSDT 419
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEA 322
H + + ++ GF KE +A
Sbjct: 420 VHGARIDPYNCVIYGFYKENRWEDA 444
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 185 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
ADE+ +MK GL+PN V M L K GL + +L + G + Y +++
Sbjct: 291 ADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMD 350
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
G +KA K ++A+ IF M+ G+ + ++ ++++ LC+ R ++A E
Sbjct: 351 GLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKAD-DAKRIFRKMQS 261
++L L K+G + +KLF M+ G P++V Y ++ G K A + ++
Sbjct: 171 SILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPH 230
Query: 262 NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
NGI ++ Y ++ R ++A F +M GHSPN+ + L++ + + +
Sbjct: 231 NGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKK 290
Query: 322 AKGAIRTLIEKGFVVNEKAVKGFL 345
A + + G V N+ + L
Sbjct: 291 ADELMTEMKSIGLVPNKVMMTTLL 314
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
EDA +F +MKE +I + M+ GL ++G QEALKLF M+ GT P + V+
Sbjct: 310 EDALRVFNQMKERDVITWS-TMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 243 YTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ A +D FR M+ GI P Y ++ L K +L DA + EM P
Sbjct: 369 CSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEP 425
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLI 330
+ T+ L+ ++ + A+ A + +I
Sbjct: 426 DAVTWRTLLGACRVQRNMVLAEYAAKKVI 454
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q M ++AD +F +++ + PN V+ +L + L EA+ LF LM+ K +V
Sbjct: 342 QLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVV 401
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
Y +++ Y K + + A + ++MQS GI PNA +Y+ ++ K +L A ++
Sbjct: 402 TYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
+G + + ++ + + + AK + L
Sbjct: 462 RSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
Query: 184 DADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +F +MKE + M+D + +V+EA +LF +R+ P +V Y ++
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
Y +A +A +FR MQ I N +Y +++ K + A EM G
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNE 338
PN T+ ++ + K + A + L G +++
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 197 LIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIF 256
L N + + LC +A+ +F ++ G P++V Y +++ Y KA +A+ +
Sbjct: 227 LYSNLIELSRRLCD---YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLI 283
Query: 257 RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKE 316
++M G+ PN SY+ L+ + + +A EM E + ++TT ++D + +
Sbjct: 284 KEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 343
Query: 317 QGVAEA 322
V EA
Sbjct: 344 DMVKEA 349
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 9/181 (4%)
Query: 185 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +F +M++ L P+ ++ K+G+ AL M + ++V+Y+ ++E
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ A IF +++ +GI+P+ +Y ++ K ++A EM EAG P
Sbjct: 234 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKA------VKGFLDMKKPFSPSV 355
N ++ L+ +V+ EA + E ++ V G LDM K
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 356 W 356
W
Sbjct: 354 W 354
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A I+++M + PN + M+ K G + ++L+L+ M+++G P I +Y ++V
Sbjct: 277 EAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV 336
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
T+ D+A ++ +K+ G+ P++ +Y +++ LC+ +L A M+ S
Sbjct: 337 YVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLS 396
Query: 301 PNMTTF 306
P + TF
Sbjct: 397 PTVDTF 402
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 172 KSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIP 231
+ A +N + +I K K T +L LC+ G +++A + F L +K
Sbjct: 198 RYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEE-FMLASKKLFPV 256
Query: 232 EIVIYTAVVEGYTKAHK-ADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
++ + ++ G+ +AKRI+R+M + I+PN SY+ ++ K L D+
Sbjct: 257 DVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRL 316
Query: 291 CVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
EM + G +P + + LV +E EA ++ L E+G
Sbjct: 317 YDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGL 360
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%)
Query: 228 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 287
G +P+++ Y +++GYT+ D+A + R+M+ GI P+ +Y L+ G K L
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 288 FEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
+ EML +G SP+M ++ L+ + K
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFK 130
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGL-MREKGTIPEIVIYTAVVEG 242
++F +M +GL P+ + ++ K G EA K+ + G +P I Y +++
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
K+ D+A +F+ ++S + P +Y +L+ GLCK R+ E+ ++G++PN
Sbjct: 164 LCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPN 222
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKK 349
T+ ++ + K + + EK ++ FL MKK
Sbjct: 223 AVTYTTMLKMYFKTKRI------------------EKGLQLFLKMKK 251
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A E+FK +K + + P + +++GLCK V + +++ G P V YT +
Sbjct: 171 DNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTM 229
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG- 298
++ Y K + + ++F KM+ G + + F+ +V L K R ++A+E E++ +G
Sbjct: 230 LKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGT 289
Query: 299 HSPNMTTFVDLVDGFVKE 316
S ++ ++ L++ + K+
Sbjct: 290 RSQDIVSYNTLLNLYFKD 307
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A+ + G++P+ + ++ G + + EA + MRE G P++ Y ++
Sbjct: 30 ERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSL 89
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE-AG 298
+ G K + ++F +M +G+SP+ +SY L+ K R +AF+ E + AG
Sbjct: 90 ISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAG 149
Query: 299 HSPNMTTFVDLVDGFVK 315
P + T+ L+D K
Sbjct: 150 LVPGIDTYNILLDALCK 166
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 185 ADEIF-KKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
A E+F +M + G PN+V +DG CK EAL+LF M + I T ++
Sbjct: 228 ATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLI 287
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
G A A+++F ++ G++P+ +Y L+ L KC + A + EM E G
Sbjct: 288 HGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIE 347
Query: 301 PNMTTFVDLVDGFVKEQ-----GVAEAKGAI--RTLIEK 332
P+ TF + G +K + GV E + R+L+ K
Sbjct: 348 PDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPK 386
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 181 MPEDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
+ + A+E+ MK+ + + N + ML+ + G ++ A + M G P I+ Y
Sbjct: 294 LYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYN 353
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEA 297
++ GY K K + A+ +F ++ + G+ P+ SY +++G + ++A + E+
Sbjct: 354 TLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRC 413
Query: 298 GHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
G+ PN L++ + + GAI+T+
Sbjct: 414 GYKPNSFNLFTLIN---LQAKYGDRDGAIKTI 442
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 185 ADEIFKKMKETGLIPNA--VAMLDGLC-KDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + F M E G+ PN + ML GL K+ V+EA F MR+ G + E Y++++
Sbjct: 229 ASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESA-YSSMIT 287
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
YT+ D A+ + M+ + + ++ V++ + +++ A V M AG SP
Sbjct: 288 IYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSP 347
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
N+ + L+ G+ K + A+G L G +E + + ++
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIE 392
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMRE-KGTIPEIVIYTAV 239
+A++++ +K +G++ + + ++ K G ++EA + +M E K +P++ ++ +
Sbjct: 576 EAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDM 635
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSR------LQDAFEFCVE 293
+ Y K D + ++ +++ +GI N Y ++ C C+R L FE E
Sbjct: 636 LRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVIN--C-CARALPLDELSGTFE---E 689
Query: 294 MLEAGHSPNMTTFVDLVDGFVK 315
M+ G +PN TF L+D + K
Sbjct: 690 MIRYGFTPNTVTFNVLLDVYGK 711
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 182 PEDADEIFKKMKETGLIPNA---VAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTA 238
P+ A ++ M G+ P + ML K+ + +AL F +RE+G + +Y
Sbjct: 619 PKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQV 677
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
++ G KA+K DDA +M+ G+ P+ Y V +Q LC + +A E ++G
Sbjct: 678 MIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737
Query: 299 HSPNMTTFVD--LVDGFVKEQGVAEAKGAIRTLIEK 332
+T F+ L+ +K +GV EA +R + +K
Sbjct: 738 R--RITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDK 771
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 188 IFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIP-EIVIYTAVVEGY 243
I K+MKE P+ + ++LD L + GLV E L + M+E ++ I+ Y V+ G
Sbjct: 199 ILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGM 258
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
KA + D I+ +M GI P+ SYT ++ L + ++++ EM + P++
Sbjct: 259 RKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSV 318
Query: 304 TTFVDLVDGFVK 315
+ L+D K
Sbjct: 319 YVYRALIDCLKK 330
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
+ N +++ LC V +A KL MR +G +P++V +T ++ GY + + + A ++F
Sbjct: 162 LTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFD 221
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT-----FVDLVDG 312
+M+ GI PN+ + +VL+ G K ++ + E+ E + T+ F +LVD
Sbjct: 222 EMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDS 281
Query: 313 FVKE 316
+E
Sbjct: 282 MCRE 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 199 PNAVAM---LDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTAVVEGYTKAHKADDAKR 254
P+AV + + GL G +EAL + +M E P +V Y AV+ G K HK D+A
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 255 IFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFV 314
+F +++ ++ ++ +Y +++ GLC +++ A +F +++ + + + G
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 315 KEQGVAEAKGAIRTLIEKGFVVN 337
+ +++A + L + G + N
Sbjct: 601 QSGYLSDACHFLYDLADSGAIPN 623
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
Q E D + + M E + P VA ++ GL K EA+ +FG + + +
Sbjct: 496 QGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADST 555
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
Y +++G +K D AK+ + + +AF Y ++GLC+ L DA F ++
Sbjct: 556 TYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDL 615
Query: 295 LEAGHSPNMTTF 306
++G PN+ +
Sbjct: 616 ADSGAIPNVVCY 627
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 203 AMLDGLCKDGLVQEALKLF-GLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIF-RKMQ 260
+++GLCK G V +A+K+ +M K P+ V V+ G +A++A + R M
Sbjct: 452 TVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMP 511
Query: 261 SNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVA 320
N I P +Y +++GL K + +A ++ +A + + TT+ ++DG V
Sbjct: 512 ENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVD 571
Query: 321 EAK 323
AK
Sbjct: 572 MAK 574
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A L GLC+ G + +A + + G IP +V Y V+ +++ +A +I +M+ N
Sbjct: 594 AFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKN 653
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVE 293
G +P+A ++ +L +L D+ + VE
Sbjct: 654 GQAPDAVTWRIL-------DKLHDSMDLTVE 677
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 219 KLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGL 278
+L G +E +P + Y ++ ++ DA ++ M++ G P+ ++T L+ G
Sbjct: 150 RLIGFKKE--FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGY 207
Query: 279 CKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
C+ L+ A + EM G PN T L+ GF+K + V + ++ L E
Sbjct: 208 CEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE 260
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 187 EIFKKMK---ETGLIPNAVA-MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
E+++ MK +T + A A ++D +C++G + ++ M ++ Y +++
Sbjct: 257 ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDS 316
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
+ + A RI M+S G+ P SY ++ GLCK A++ E E P+
Sbjct: 317 LCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPS 376
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEK 332
T+ L++ KE +A+ + ++ K
Sbjct: 377 EYTYKLLMESLCKELDTGKARNVLELMLRK 406
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A++++ +M GL+P+ + +M+ GLCK + +A K+ + ++
Sbjct: 64 AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVS---------KSCSTFNTLIN 114
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY KA + D +F +M GI N +YT L+ G + A + EM+ G
Sbjct: 115 GYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYS 174
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVV 336
+ TF D++ + E + A+ L++K +V
Sbjct: 175 SSITFRDILPQLCSRK---ELRKAVAMLLQKSSMV 206
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 43/160 (26%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQE---------------------------- 216
+FK M+E+ + + ++ GLCK G E
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 217 ---ALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTV 273
A KL+ M +G +P+ + Y +++ G K +K A++ +S + ++
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNT 111
Query: 274 LVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF 313
L+ G CK +R++D EM G N+ T+ L+ GF
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 220 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 279
+F +MRE + Y ++ G KA K D+A IF + +G+ P+ +Y +++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 280 KCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
+ S L A + EM+ G P+ T+ ++ G K+ +A+A+
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQAR 100
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 188 IFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFG-LMREKGTIPEIVIYTAVVEGYTKA 246
+F + T NA+ + + + E++ LF ++ +P +V Y ++ +
Sbjct: 172 VFSNTRPTVFTCNAI--IAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDE 229
Query: 247 HKADDAKRIFRKMQSNG-ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
D+A ++R + +N +P++ +Y L +GL + R+ DA EML G + + T
Sbjct: 230 GNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTV 289
Query: 306 FVDLVDGFV 314
+ +L+ G++
Sbjct: 290 YNNLIRGYL 298
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A + K+ + G I V ++L K G + EA LF +M E+ IV A++
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLT 116
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
GY K + ++A +FR+M N + S+TV++ LC R +DA E EM E
Sbjct: 117 GYVKCRRMNEAWTLFREMPKNVV-----SWTVMLTALCDDGRSEDAVELFDEMPE----R 167
Query: 302 NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLD 346
N+ ++ LV G ++ + +AK + + V +KG+++
Sbjct: 168 NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIE 212
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
EDA E+F +M E ++ + ++ GL ++G +++A ++F M + ++V + A+++G
Sbjct: 155 EDAVELFDEMPERNVV-SWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKG 209
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
Y + ++AK +F M N ++T +V G C+ +++A+ EM E N
Sbjct: 210 YIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPE----RN 261
Query: 303 MTTFVDLVDGFVKEQGVAEA 322
+ ++ ++ GF + EA
Sbjct: 262 IVSWTAMISGFAWNELYREA 281
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 182 PEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMRE---KGTIPEIVIYTA 238
P +A +FK + ETG P+ ++ L + ++ + ++ E GT + + + A
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNA 120
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
V+ ++++ +DA + KM+ G++P +Y L++G + + + E MLE G
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 299 H---SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ PN+ TF LV + K++ V EA ++ + E G
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A+++ + G +++A++ M+E G P Y +++GY A K + + + M
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 263 G---ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGV 319
G + PN ++ VLVQ CK ++++A+E +M E G P+ T+ + +V++
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 320 AEAKGAIRTLIEKGFVVNEKA 340
A+ + +EK V+ EKA
Sbjct: 240 VRAESEV---VEK-MVMKEKA 256
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLF-GLMREKGTIPEIVIYTA 238
E A ++FK+M + G+ P+A A + G + ++A +L L+ E + P +VI+T
Sbjct: 347 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE--SRPNVVIFTT 404
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
V+ G+ DDA R+F KM G+SPN ++ L+ G + + A E M G
Sbjct: 405 VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 464
Query: 299 HSPNMTTFVDLVDGF 313
P +TF+ L + +
Sbjct: 465 VKPENSTFLLLAEAW 479
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 43/176 (24%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI---PEIVIY 236
EDA + KMKE GL P ++ G G + + +L LM E+G + P I +
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT------------------------ 272
+V+ + K K ++A + +KM+ G+ P+ +Y
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 273 -------------VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
++V G C+ R++D F M E N+ F L++GFV+
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 95/248 (38%), Gaps = 80/248 (32%)
Query: 183 EDADEIFKKMKETGLIPNAVA--------------------------------------- 203
E+A E+ KKM+E G+ P+ V
Sbjct: 205 EEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCG 264
Query: 204 -MLDGLCKDGLVQEALK-----------------------------------LFGLMREK 227
++ G C++G V++ L+ + LM+E
Sbjct: 265 IVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKEC 324
Query: 228 GTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDA 287
+++ Y+ V+ ++ A + A ++F++M G+ P+A +Y++L +G + + A
Sbjct: 325 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA 384
Query: 288 FEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN----EKAVKG 343
E +E L PN+ F ++ G+ + +A + + G N E + G
Sbjct: 385 EEL-LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 443
Query: 344 FLDMKKPF 351
+L++K+P+
Sbjct: 444 YLEVKQPW 451
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 182 PEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMRE---KGTIPEIVIYTA 238
P +A +FK + ETG P+ ++ L + ++ + ++ E GT + + + A
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNA 120
Query: 239 VVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAG 298
V+ ++++ +DA + KM+ G++P +Y L++G + + + E MLE G
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 299 H---SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ PN+ TF LV + K++ V EA ++ + E G
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 218 LKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG 277
+++ LM+E +++ Y+ V+ ++ A + A ++F++M G+ P+A +Y++L +G
Sbjct: 340 VQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 399
Query: 278 LCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
+ + A E +E L PN+ F ++ G+ + +A + + G N
Sbjct: 400 YVRAKEPKKAEEL-LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 458
Query: 338 ----EKAVKGFLDMKKPF 351
E + G+L++K+P+
Sbjct: 459 IKTFETLMWGYLEVKQPW 476
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A+++ + G +++A++ M+E G P Y +++GY A K + + + M
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 263 G---ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGV 319
G + PN ++ VLVQ CK ++++A+E +M E G P+ T+ + +V++
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 320 AEAKGAIRTLIEKGFVVNEKA 340
A+ + +EK V+ EKA
Sbjct: 240 VRAESEV---VEK-MVMKEKA 256
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A ++FK+M + G+ P+A A + G + ++A +L + + P +VI+T V
Sbjct: 372 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTV 430
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ G+ DDA R+F KM G+SPN ++ L+ G + + A E M G
Sbjct: 431 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 490
Query: 300 SPNMTTFVDLVDGF 313
P +TF+ L + +
Sbjct: 491 KPENSTFLLLAEAW 504
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 43/176 (24%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTI---PEIVIY 236
EDA + KMKE GL P ++ G G + + +L LM E+G + P I +
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 237 TAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYT------------------------ 272
+V+ + K K ++A + +KM+ G+ P+ +Y
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 273 -------------VLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
++V G C+ R++D F M E N+ F L++GFV+
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 183 EDADEIFKKMKETGL---IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E+ D + K M++ + + + ++DG G V+EA +L +M +K E +Y +
Sbjct: 263 EELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLI 322
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+ GY++ + ++ +M S G++PN +Y VL+ GLCK ++ +A F E+
Sbjct: 323 MNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL 377
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 7/189 (3%)
Query: 152 FDNKAGNSSEVAASNLSEE-AKSANSNQPAMPEDADEIFKKMKETGLIPNA---VAMLDG 207
F+ N S S EE AKS S++ E +I K+MK+ L + +++
Sbjct: 98 FNWARSNPSYTPTSMEYEELAKSLASHKKY--ESMWKILKQMKDLSLDISGETLCFIIEQ 155
Query: 208 LCKDGLVQEALKLF-GLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISP 266
K+G V +A++LF G+ + G + +Y +++ A + R+M G+ P
Sbjct: 156 YGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKP 215
Query: 267 NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAI 326
+ +Y +LV G C ++++A EF EM G +P L++G + + AK +
Sbjct: 216 DKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMV 275
Query: 327 RTLIEKGFV 335
+ + GFV
Sbjct: 276 SKMTKGGFV 284
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E+ KM + G +P+ +++ + K G V+ ++++ + G +I Y +
Sbjct: 269 ESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTL 328
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ +K K D+A R+ +G P Y +++G+C+ DAF F +M H
Sbjct: 329 IPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAH 388
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFV 335
PN + L+ + +A + + E G V
Sbjct: 389 PPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLV 424
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 7/153 (4%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++L LC + A L M KG P+ Y +V G+ A K +A+ +M
Sbjct: 187 SLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRR 246
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G +P A +L++GL L+ A E +M + G P++ TF L++ K
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKS------ 300
Query: 323 KGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPSV 355
G + IE + + + +D K P+V
Sbjct: 301 -GEVEFCIEMYYTACKLGLCVDIDTYKTLIPAV 332
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 181 MPEDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
M A + ++M GL P+ +++G C G ++EA + M +G P
Sbjct: 197 MFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRD 256
Query: 238 AVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEML-- 295
++EG A + AK + KM G P+ ++ +L++ + K + EFC+EM
Sbjct: 257 LLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV----EFCIEMYYT 312
Query: 296 --EAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ G ++ T+ L+ K + EA + +E G
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG 352
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
++A E +M G P A +++GL G ++ A ++ M + G +P+I + +
Sbjct: 234 KEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNIL 293
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+E +K+ + + ++ G+ + +Y L+ + K ++ +AF +E GH
Sbjct: 294 IEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGH 353
Query: 300 SPNMTTFVDLVDGFVK 315
P + + ++ G +
Sbjct: 354 KPFPSLYAPIIKGMCR 369
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 7/163 (4%)
Query: 154 NKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGL---IPNAVAMLDGLCK 210
K G ++ N+ EA S + E E++ + GL I ++ + K
Sbjct: 279 TKGGFVPDIQTFNILIEAISKSGEV----EFCIEMYYTACKLGLCVDIDTYKTLIPAVSK 334
Query: 211 DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFS 270
G + EA +L E G P +Y +++G + DDA F M+ PN
Sbjct: 335 IGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPV 394
Query: 271 YTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF 313
YT+L+ + + DA + VEM E G P F + DG
Sbjct: 395 YTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGL 437
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 191 KMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPE-----IVIYTAVVEGYTK 245
K++ + + N V L+ L ++G EALKLF ++++ P + + +V GY
Sbjct: 305 KVRMSAMAYNYV--LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCA 362
Query: 246 AHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTT 305
K ++A +FR+M SP+ S+ L+ LC L +A + EM E P+ T
Sbjct: 363 GGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYT 422
Query: 306 FVDLVDGFVKEQGVAEAKGAIRTLIE 331
+ L+D KE + E +T++E
Sbjct: 423 YGLLMDTCFKEGKIDEGAAYYKTMVE 448
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 63/130 (48%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
M++G C G +EA+++F M + P+ + + ++ +A++++ +M+
Sbjct: 355 VMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEK 414
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
+ P+ ++Y +L+ K ++ + + M+E+ PN+ + L D +K + +A
Sbjct: 415 NVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA 474
Query: 323 KGAIRTLIEK 332
K ++ K
Sbjct: 475 KSFFDMMVSK 484
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 184 DADEIFKKMKETGLIP-NAV--AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA + M G P NAV ++ K G + EA ++ LM +G P++ YT ++
Sbjct: 390 DAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVII 449
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
GY K D+A+ I + + + +Y L++G CK +A + EM G
Sbjct: 450 SGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQ 509
Query: 301 PNMTTFVDLVDGF-VKEQGVAEAKGAIRTLIEKGFVVN 337
PN + L+ F +K +A+ + +KG +N
Sbjct: 510 PNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 547
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
++ LC+ V++A L M KG P ++ VV +K D+AK + + M+S G
Sbjct: 378 VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRG 437
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
+ P+ ++YTV++ G K + +A E E + + T+ L+ G+ K + EA
Sbjct: 438 LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEA 496
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
E A E+F M+E + + A L+GL +G ++ L+LF LM++ G P V + +V+ G
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSA-LNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG 350
Query: 243 YTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
+ D+ +R F M++ GI P Y LV + RL+DA +M H+
Sbjct: 351 CSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAA 410
Query: 302 NMTTFV 307
++ +
Sbjct: 411 VWSSLL 416
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
+ A +F++M + ++ + +M+ G ++GL EA+KLF M E+G P++ TAV+
Sbjct: 348 DSAKAVFREMSDRSVV-SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
+ D+ KR+ ++ N + + F L+ KC +Q+A EM +
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM----RVKD 462
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLI-EKGFVVNEKAVKGFL 345
+ ++ ++ G+ K EA L+ EK F +E+ V L
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 210 KDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAF 269
K+G + A K+F M ++G +YT V + +A+R+ +M+ +G+SP
Sbjct: 316 KEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE 375
Query: 270 SYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
++ L+ G + + E+C M+ G P+ + F ++V K + V A +
Sbjct: 376 TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKS 435
Query: 330 IEKGFVVNEKA----VKGFLD 346
I+KGFV +E ++GF++
Sbjct: 436 IDKGFVPDEHTYSHLIRGFIE 456
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 214 VQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKAD--DAKRIFRKMQSNGISPNAFSY 271
++E++ L + K + + + Y+ VV Y KA + D A+++F +M G S N+F Y
Sbjct: 285 IEESMSLLKRLLMKNMVVDTIGYSIVV--YAKAKEGDLVSARKVFDEMLQRGFSANSFVY 342
Query: 272 TVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVK 315
TV V+ C+ +++A EM E+G SP TF L+ GF +
Sbjct: 343 TVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFAR 386
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 184 DADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +K + + P+ V+ M++ L K G + +A++L+ M + P++ I V+
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM-LEAGH 299
+ + +A +FR++ G PN +Y L++ LCK R + +E EM L+ G
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 300 -SPNMTTFVDLV 310
SPN TF L+
Sbjct: 385 CSPNDVTFSYLL 396
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Query: 183 EDADEIF-KKMKETGLIPNAVAM-LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
E A+ +F + +E G A+ M L+G C G V EA + + + P++V Y ++
Sbjct: 230 EFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMI 289
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
TK K A ++R M +P+ ++ LC R+ +A E E+ E G
Sbjct: 290 NALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPD 349
Query: 301 PNMTTFVDLVDGFVK 315
PN+ T+ L+ K
Sbjct: 350 PNVVTYNSLLKHLCK 364
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A E+F+ M G+ P+ ++ L + + MRE G + + + Y AV
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ + K + + A+ ++++M I P+ Y VL+ +Q A + M EAG
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
N + L+ + K + EA+ R L++
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 18/200 (9%)
Query: 163 AASNLSEEAKSANSN---QPAMPEDADEIFKKMKE----TGLIPNAVAMLDGLCKDGLVQ 215
A N+S E SAN + + +A+ +F +E T + N + G+ K +
Sbjct: 465 VAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKS--CE 522
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLV 275
+A +LF M G P+ Y +V+ A + KM+ G + Y ++
Sbjct: 523 KACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVI 582
Query: 276 QGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF- 334
K +L A E EM+E P++ + L++ F V +A + + E G
Sbjct: 583 SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIP 642
Query: 335 ---VVNEKAVK-----GFLD 346
V+ +K G+LD
Sbjct: 643 GNSVIYNSLIKLYTKVGYLD 662
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 220 LFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLC 279
L LM + P+ + Y V++G+ A D A+R++ M G PN Y ++ LC
Sbjct: 269 LLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLC 328
Query: 280 KCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAI 326
K A+ C + + PN+ T L+ G VK+ + +AK +
Sbjct: 329 KAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM 375
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A + ++K + + PNA + G CK V+EAL M+ G P ++ YT +
Sbjct: 207 EQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTI 265
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y + + + +M++NG PN+ +YT ++ L ++A M +G
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRT-LIEKGFVVNEKAVKGFLDM 347
P+ + L+ + + EA+ R + E G +N + M
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A + ++K + + PNA + G CK V+EAL M+ G P ++ YT +
Sbjct: 207 EQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTI 265
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ Y + + + +M++NG PN+ +YT ++ L ++A M +G
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRT-LIEKGFVVNEKAVKGFLDM 347
P+ + L+ + + EA+ R + E G +N + M
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 216 EALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVL 274
+A LF +M +G P I +YT+++ Y K+ D A M+S + P+ F++TVL
Sbjct: 162 QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVL 221
Query: 275 VQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKG 333
+ CK R +EM G + T+ ++DG+ K E + + +IE G
Sbjct: 222 ISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG 280
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 185 ADEIFKKMKETGLIPNAVA----------MLDGLCKDGLVQEALKLFGLMREKGTIPEIV 234
A EI++ + + G PN ++ +L K G+ + ++L M +KG P+
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 235 IYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+ AV+ +KA + A +IF+ M NG P SY L+ L K +AF M
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQ 317
++ G PN+ + + +Q
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQ 542
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
A +IFK M + G P + A+L L K L EA +++ M + G P + YT +
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSP 301
T K + + ++M S GI P+ ++ ++ G + A+E+ M P
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEP 596
Query: 302 NMTTFVDLVDGF 313
N T+ L++
Sbjct: 597 NEITYEMLIEAL 608
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++D K G++ EA +F M ++ ++V + A+V GY++ + +DA R+F KMQ
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNM----SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDG 312
I + +++ + G + +A C +ML +G PN T + ++ G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 181 MPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
M ++A+ +F M ++ + AM+ G + G ++A++LF M+E+ ++V ++A +
Sbjct: 279 MMDEANTVFSNMSVKDVV-SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQD-------AFEFCVE 293
GY + +A + R+M S+GI PN + ++ G L A ++ ++
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 294 MLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
+ + GH L+D + K + V A+ +L
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 37/188 (19%)
Query: 182 PEDADEIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGT--------- 229
PE A EI ++M+ G+ +A +L L K G ++ A L+ M +KG
Sbjct: 190 PEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNV 249
Query: 230 -------------------------IPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGI 264
P+ + Y ++ Y + D+AK+++ ++ N
Sbjct: 250 RIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNC 309
Query: 265 SPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKG 324
+PNA ++ L+ LC + + + + P+ T LV G V+ + +AKG
Sbjct: 310 APNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKG 369
Query: 325 AIRTLIEK 332
IRT+ +K
Sbjct: 370 LIRTVKKK 377
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 35/199 (17%)
Query: 178 QPAMPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYT 237
Q ++A +F++M ++ + AM+DGL K+G V EA +LF M E+ I+ +
Sbjct: 183 QRGRIDEAMNLFERMPRRDVV-SWTAMVDGLAKNGKVDEARRLFDCMPERN----IISWN 237
Query: 238 AVVEGYTKAHKADDAKRIFRKM----------------------QSNGI-----SPNAFS 270
A++ GY + ++ D+A ++F+ M ++ G+ N S
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVIS 297
Query: 271 YTVLVQGLCKCSRLQDAFEFCVEMLEAGH-SPNMTTFVDLVDGFVKEQGVAEAKGAIRTL 329
+T ++ G + ++A +ML G PN+ T+V ++ G+ E + I L
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ-QIHQL 356
Query: 330 IEKGF-VVNEKAVKGFLDM 347
I K NE L+M
Sbjct: 357 ISKSVHQKNEIVTSALLNM 375
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 185 ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
A+ +F++M E ++ + M+DG + G + +AL+LF M E+ IV + ++V+
Sbjct: 128 AEMLFQEMPERNVV-SWNTMIDGYAQSGRIDKALELFDEMPERN----IVSWNSMVKALV 182
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
+ + D+A +F +M + S+T +V GL K ++ +A + + N+
Sbjct: 183 QRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEA----RRLFDCMPERNII 234
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
++ ++ G+ + + EA + + E+ F + GF+
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFI 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
+P ++ LCK G + EA KLF + E+ ++V +T V+ GY K +A+ +F
Sbjct: 46 VPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARELFD 101
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQ 317
++ S N ++T +V G + +L A EM E N+ ++ ++DG+ +
Sbjct: 102 RVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPE----RNVVSWNTMIDGYAQSG 154
Query: 318 GVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
+ +A + E+ V VK +
Sbjct: 155 RIDKALELFDEMPERNIVSWNSMVKALV 182
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++ LCK +EA+ LFG M E G P+ Y ++ +A + + + KM+S
Sbjct: 327 VLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSA 386
Query: 263 GISP--NAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVA 320
G N Y ++ LC RL+ A M G P + T+ L+ +
Sbjct: 387 GYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLT 446
Query: 321 EAKGAIRTLIEKGFVVNEKAVK 342
A G + +KG V+ K +
Sbjct: 447 RANGLYKEAAKKGIAVSPKEYR 468
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADD-------AKRIF 256
++ G C + EA +L G M G Y +++ K + D +++
Sbjct: 251 LISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVL 310
Query: 257 RKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKE 316
+M+ G+ N ++ VL+ LCK R ++A M E G P+ T++ L+ +
Sbjct: 311 LEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQA 370
Query: 317 QGVAEAKGAIRTLIEKGF--VVNEKAVKGFLDM 347
+ E I + G+ ++N+K GFL +
Sbjct: 371 ARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKI 403
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%)
Query: 208 LCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPN 267
L + G +E + + M+ P++V YT V++G A ++F ++ G++P+
Sbjct: 261 LVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPD 320
Query: 268 AFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAK 323
++Y V + GLCK + ++ A + M + G PN+ T+ L+ VK ++ AK
Sbjct: 321 VYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAK 376
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query: 185 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVE 241
AD++F ++ GL P+ ++GLCK ++ ALK+ M + G+ P +V Y +++
Sbjct: 305 ADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIK 364
Query: 242 GYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQG-------LCKCSRLQDAF 288
KA AK ++++M++NG++ N+ ++ +++ +C L++AF
Sbjct: 365 ALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAF 418
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 188 IFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
+ +MK + P+ V +L G+ D +A KLF + G P++ Y + G
Sbjct: 273 VLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLC 332
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMT 304
K + + A ++ M G PN +Y +L++ L K L A EM G + N
Sbjct: 333 KQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSH 392
Query: 305 TFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
TF ++ +++ V A G L+E+ F +N
Sbjct: 393 TFDIMISAYIEVDEVVCAHG----LLEEAFNMN 421
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 184 DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
+A ++F + E L+ AM+ G + EAL L M+ G P+++ + A++ G+
Sbjct: 170 NARKVFSDLGEQDLVVFN-AMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGF 228
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ + I M +G P+ S+T ++ GL + + AF+ +ML G PN
Sbjct: 229 SHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNS 288
Query: 304 TTFVDLV 310
T + L+
Sbjct: 289 ATIITLL 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
+++D K G V A K+F + E+ ++V++ A++ GY +AD+A + + M+
Sbjct: 157 SLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
GI P+ ++ L+ G + E M G+ P++ ++ ++ G V +A
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKA 272
Query: 323 KGAIRTLIEKGFVVNEKAVKGFL 345
A + ++ G N + L
Sbjct: 273 FDAFKQMLTHGLYPNSATIITLL 295
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 183 EDADEIFKKMKE-------TGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVI 235
E A ++F+ ++E G+ + ML G CK ++A +LF M +G + +
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVML-GKCKQP--EKAHELFQEMINEGCVVNHEV 187
Query: 236 YTAVVEGYTKAHKADDAKRIFRKMQS-NGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
YTA+V Y+++ + D A + +M+S + P+ +Y++L++ + + +M
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDM 247
Query: 295 LEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAI 326
G PN T+ L+D + K + E + +
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTL 279
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 151 GFDNKAGNSSEVAASNLSEEAKSANSNQPAMPEDADEIFKKMKETGLIPNAVAMLDGLCK 210
GF KAG S V+ +N + S N P A +F+ M+E I + +M+ GL
Sbjct: 293 GFVEKAGYSWIVSVNNALIDMYSRCGNVPM----ARLVFEGMQEKRCIVSWTSMIAGLAM 348
Query: 211 DGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQS-NGISPNAF 269
G +EA++LF M G P+ + + +++ + A ++ + F +M+ I P
Sbjct: 349 HGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIE 408
Query: 270 SYTVLVQGLCKCSRLQDAFEFCVEM 294
Y +V + +LQ A++F +M
Sbjct: 409 HYGCMVDLYGRSGKLQKAYDFICQM 433
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 185 ADEIFKKMKETGLIP----NAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
A E+F ++E + +L L K G A KLF M E+G P + +YTA++
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALL 166
Query: 241 EGYTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
YT+++ DDA I KM+S P+ F+Y+ L++ S+ EM E
Sbjct: 167 AAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLI 226
Query: 300 SPNMTTFVDLVDGF 313
+PN T ++ G+
Sbjct: 227 TPNTVTQNIVLSGY 240
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 184 DADEIFKK--MKET-GLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
DA +F + +KET L+ NA+ + GL G ++E+L+LF MRE P+ + + ++
Sbjct: 294 DAWSVFYRASVKETDALMWNAI--IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLL 351
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ +A F+ ++ +G P + Y +V L + ++DA +F EM
Sbjct: 352 AACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM---PIK 408
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIE 331
P + L++G + + A+ + LIE
Sbjct: 409 PTGSMLGALLNGCINHGNLELAETVGKKLIE 439
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
AM+ G +G+ EA LF M EK P +V +T ++ Y+ + + + F M+ +
Sbjct: 402 AMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDH 461
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+ P+A Y ++V L + RL++A+E M
Sbjct: 462 NLEPSADHYGIMVDMLGRAGRLEEAYELIKSM 493
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
E A + +M E GL PN A+L K G + +++ G + + G + I TA+
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTAL 334
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
V+ Y K + D A +F M I S+T ++QG R A + +M+ +G
Sbjct: 335 VDMYAKCGELDCAATVFSNMNHKDI----LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE 390
Query: 300 SPNMTTFVDLV 310
P+ F+ ++
Sbjct: 391 KPDEVVFLAVL 401
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
M+ G K G +EA KLF +M E ++V +T ++ G+ K ++A++ F +M
Sbjct: 172 VMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEK 227
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
+ S+ ++ G + +DA +ML G PN TT+V ++ +
Sbjct: 228 SV----VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT 283
Query: 323 KGAIRTLIEKGFVVNEKAVKGFLDM 347
+ ++ + EK +N LDM
Sbjct: 284 RSLVKLIDEKRVRLNCFVKTALLDM 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
E+A + F +M E ++ + AML G ++G ++AL+LF M G P + V+
Sbjct: 215 ENARKYFDRMPEKSVV-SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
+ + + + + + N F T L+ KC +Q A E+ G N
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRN 330
Query: 303 MTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGF 344
+ T+ ++ G+ + ++ A+ T+ ++ V + G+
Sbjct: 331 LVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGY 372
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 11/181 (6%)
Query: 184 DADEIFKKMKETGLIPNAVAM---LDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+A +F KM E G+IP+ V M + G+++ ++ + G + ++ I +A+V
Sbjct: 1015 EAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALV 1074
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+ Y+K + A +F + N F + +++GL Q+A + +M
Sbjct: 1075 DMYSKCGSLERALLVFFNLPKK----NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVK 1130
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKKPFSPS--VWEA 358
PN TFV + V E + R++I+ +V+ V+ + M FS + ++EA
Sbjct: 1131 PNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSN--VEHYGGMVHLFSKAGLIYEA 1188
Query: 359 I 359
+
Sbjct: 1189 L 1189
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
++++GL G QEALK+F M + P V + +V T A D+ +RI+R M +
Sbjct: 1103 SIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDD 1162
Query: 263 -GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAE 321
I N Y +V K + +A E M PN + L+DG + +
Sbjct: 1163 YSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM---EFEPNAVIWGALLDGCRIHKNLVI 1219
Query: 322 AKGAIRTLI 330
A+ A L+
Sbjct: 1220 AEIAFNKLM 1228
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 187 EIFKKMKETGLIPNAVA---MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
E+ +MK GL PN + ++D G V+ A+++ M GT P++V YT ++
Sbjct: 545 ELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKIC 604
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV----EMLEAGH 299
+ A +F +M+ I PN +Y L++ K L + + C+ +M AG+
Sbjct: 605 AENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQ-CLAIYQDMRNAGY 663
Query: 300 SPNMTTFVDLV----DGFVKEQGVAEAK 323
PN +L+ +G ++E G ++ K
Sbjct: 664 KPNDHFLKELIEEWCEGVIQENGQSQDK 691
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 185 ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYT 244
A +F M++ + +M+ G G + EA LF E+ + ++V++TA++ GY
Sbjct: 201 ARAVFDSMRDKN-VKCWTSMVFGYVSTGRIDEARVLF----ERSPVKDVVLWTAMMNGYV 255
Query: 245 KAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQ 285
+ ++ D+A +FR MQ+ GI P+ F L+ G + L+
Sbjct: 256 QFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 33/171 (19%)
Query: 204 MLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSNG 263
M+ GLC++G V EA +F MRE+ +V +T ++ GY + ++ D A+++F M
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERN----VVTWTTMITGYRQNNRVDVARKLFEVMPEK- 232
Query: 264 ISPNAFSYTVLVQGLCKCSRLQDAFEF-----------CVEML----EAGHSPNMTTFVD 308
S+T ++ G R++DA EF C M+ E G D
Sbjct: 233 ---TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFD 289
Query: 309 LVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFLDMKK----PFSPSV 355
L++ ++ A +G I+ KGF + +A+ F M+K P PS+
Sbjct: 290 LME----DRDNATWRGMIKAYERKGFEL--EALDLFAQMQKQGVRPSFPSL 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 181 MPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVV 240
+P++A ++F +M E ++ + ++ G K+ ++ EA +F LM E+ +V +TA+V
Sbjct: 63 LPKEARQLFDEMSERNVV-SWNGLVSGYIKNRMIVEARNVFELMPERN----VVSWTAMV 117
Query: 241 EGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHS 300
+GY + +A+ +F +M N S+TV+ GL R+ A + +M+
Sbjct: 118 KGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKL-YDMMPV--- 169
Query: 301 PNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGF 344
++ +++ G +E V EA+ + E+ V + G+
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGY 213
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
+ A +F M+ +I + +M+ G K G L+ F M E+G P V Y A++
Sbjct: 526 DTASRVFNFMENRNVI-SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 243 YTKAHKADDAKRIFRKM-QSNGISPNAFSYTVLVQGLCKCSRLQDAFEF 290
+ + R F M + + I P Y +V LC+ L DAFEF
Sbjct: 585 CSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
E A E+F M E + + AM+ G + G +++A F + +G +V +TA++ G
Sbjct: 172 EKARELFYSMMEKNEV-SWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITG 226
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPN 302
Y KA K + A+ +F+ M N N ++ ++ G + SR +D + MLE G PN
Sbjct: 227 YMKAKKVELAEAMFKDMTVN---KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 192 MKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGT----------IPEIVI--- 235
M G+ PN A+ LC +G V++AL L+ +M KG I E +I
Sbjct: 970 MISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKG 1029
Query: 236 ---------------------YTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVL 274
Y +++ + D A + M N P + SY +
Sbjct: 1030 EIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSV 1089
Query: 275 VQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGF 334
+ GL + ++L A +F EM+E G SP+++T+ LV F + V E++ I++++ G
Sbjct: 1090 INGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGE 1149
Query: 335 VVNEKAVKGFLD 346
+++ K +D
Sbjct: 1150 SPSQEMFKTVID 1161
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 185 ADEIFKKMKETGLI-PNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
A++ ++ G++ PN ++ L G + A+ L M + +IP Y +V+ G
Sbjct: 1034 AEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGL 1093
Query: 244 TKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNM 303
+ ++ D A +M G+SP+ +++ LV C+ ++ ++ M+ G SP+
Sbjct: 1094 LRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQ 1153
Query: 304 TTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVN 337
F ++D F E+ +A + + + G+ V+
Sbjct: 1154 EMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVD 1187
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 191 KMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKAD 250
K+K G + + +L C +++A KLF M E+ +V + ++ GY+KA +
Sbjct: 201 KLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER----NLVTWNVMLNGYSKAGLIE 256
Query: 251 DAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLV 310
A+ +F ++ I S+ ++ G + ++L +A + EML G P+ VDL+
Sbjct: 257 QAEELFDQITEKDI----VSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 311 DGFVKEQGVAEAKGAIRTLIEKGF 334
+ G ++ T++++GF
Sbjct: 313 SASARSVGSSKGLQLHGTIVKRGF 336
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 185 ADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMR-EKGTIPEIVIYTAVVEGY 243
A +F M E I + AML G K GL +E L+LF LMR EK P+ V AV+ G
Sbjct: 308 ARRLFDNMPERTAI-SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGC 366
Query: 244 TKAHKADDAKRIFRKMQSN--GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEM 294
+ D IF M + G P Y +V L + R+ +AFEF M
Sbjct: 367 SHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRM 419
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 203 AMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFRKMQSN 262
A++ K + +AL+LF +E G + +V +TA++ G+ + ++A +F +M+
Sbjct: 335 ALMVAYSKCTAMLDALRLF---KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 263 GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQGVAEA 322
G+ PN F+Y+V++ L S E ++++ + + T L+D +VK V EA
Sbjct: 392 GVRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 323 KGAIRTLIEKGFVVNEKAVKGF 344
+ +K V + G+
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGY 469
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
E A +F+ MK+ ++ +M+ G G V++A ++F + K +IV+Y A+VEG
Sbjct: 192 ESARTVFETMKDENVVC-CTSMISGYMNQGFVEDAEEIFNTTKVK----DIVVYNAMVEG 246
Query: 243 YTKAHKADDAKR---IFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
++++ + AKR ++ MQ G PN ++ ++ + + + +++++G
Sbjct: 247 FSRS--GETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGV 304
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGF 344
++ L+D + K G+ +A+ + EK + G+
Sbjct: 305 YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 184 DADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGY 243
DA +F +M+E + + +M+DG K+G +EAL+LF M+E P V + +
Sbjct: 326 DARRVFDQMQEKNVF-SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSAC 384
Query: 244 TKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLE 296
+ + D IF MQ + + P Y +V + + L AFEF M E
Sbjct: 385 SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPE 438
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 4/167 (2%)
Query: 183 EDADEIFKKMKETGLIPN---AVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 239
ED + I KKM + G+ P+ A A++ K G + A + F ++ G P+ IY A+
Sbjct: 401 EDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAM 460
Query: 240 VEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGH 299
+ GY A K +R+ ++MQ+ + + Y L++ + A M A
Sbjct: 461 ILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASD 520
Query: 300 SP-NMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
P + + V+ + K V +AK + + G ++K + +
Sbjct: 521 GPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLV 567
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
+DA ++F+ M + M+ G + GL++E+L F M G +P+ + +++++
Sbjct: 291 DDASKLFRMMSRADTVTWN-CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 243 YTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKC---SRLQDAFEFCVEMLEAGH 299
+K + K+I + + IS + F + L+ KC S Q+ F C +
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC-------N 402
Query: 300 SPNMTTFVDLVDGFVKEQGVAEAKGAIRTLIEKGFVVNEKAVKGFL 345
S ++ F ++ G++ ++ R L++ NE + L
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 194 ETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAK 253
E G + A+A ++ C+ +A LF M +KG +V Y+ +++ Y K + DA
Sbjct: 385 EAGQVTYAIA-INAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 443
Query: 254 RIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGF 313
R+ KM+ G PN + Y L+ + L+ A + EM A P+ ++ ++ +
Sbjct: 444 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAY 503
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 183 EDADEIFKKMKETGLIPNAV---AMLDGLCK-------DGLVQEALKLFGLMREKGTIPE 232
++A + + MK G+ P+ ++L LC+ GLV EAL + MR P
Sbjct: 225 KEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPT 284
Query: 233 IVIYTAVVEGYTKAHKADDAKRIFRKMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCV 292
+ Y ++ + + ++ +I +M+ +G P+ SY +V+ L R +
Sbjct: 285 SMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVD 344
Query: 293 EMLEAGHSPNMTTFVDLV 310
EM+E G P + DL+
Sbjct: 345 EMIERGFRPERKFYYDLI 362
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Query: 198 IPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKADDAKRIFR 257
+ N++ L C D V A K+F M EK ++V + +V+ G+ + K ++A ++
Sbjct: 158 VQNSLLHLYANCGD--VASAYKVFDKMPEK----DLVAWNSVINGFAENGKPEEALALYT 211
Query: 258 KMQSNGISPNAFSYTVLVQGLCKCSRLQDAFEFCVEMLEAGHSPNMTTFVDLVDGFVKEQ 317
+M S GI P+ F+ L+ K L V M++ G + N+ + L+D + +
Sbjct: 212 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 271
Query: 318 GVAEAKGAIRTLIEKGFVVNEKAVKGF 344
V EAK +++K V + G
Sbjct: 272 RVEEAKTLFDEMVDKNSVSWTSLIVGL 298
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 183 EDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEG 242
E A +FK E + +M+ GL G Q+AL+LFG M+E+G P V AV+
Sbjct: 420 ERAFMVFKTATEKD-VALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTA 478
Query: 243 YTKAHKADDAKRIFRKMQSN-GISPNAFSYTVLVQGLCKCSRLQDA 287
+ + ++ +F M+ G P Y LV LC+ R+++A
Sbjct: 479 CSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEA 524
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 191 KMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAVVEGYTKAHKAD 250
+M E G+ A + GL ++GLV +AL++F L +E+ +V +T+++ G + K
Sbjct: 314 EMMEAGVCN---AYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 251 DAKRIFRKMQSNGISPN 267
+A +FR+MQ G+ PN
Sbjct: 371 EALELFREMQVAGVKPN 387