Miyakogusa Predicted Gene

Lj2g3v1758470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1758470.1 Non Chatacterized Hit- tr|A9NW37|A9NW37_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,65.62,9e-19,seg,NULL; DUF1195,Protein of unknown function
DUF1195,CUFF.37987.1
         (173 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65650.1 | Symbols:  | Protein of unknown function (DUF1195) ...   224   2e-59
AT4G36660.1 | Symbols:  | Protein of unknown function (DUF1195) ...   216   5e-57
AT1G19380.1 | Symbols:  | Protein of unknown function (DUF1195) ...   116   9e-27

>AT5G65650.1 | Symbols:  | Protein of unknown function (DUF1195) |
           chr5:26239588-26241195 FORWARD LENGTH=185
          Length = 185

 Score =  224 bits (571), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 110/178 (61%), Positives = 130/178 (73%), Gaps = 7/178 (3%)

Query: 1   MKDDDGLPTTTAP------TAKKDNLDSGLFGKGRYKFWXXXXXXXXXFWSMFTGTVSLR 54
           MKD D LP +T+       T KK+   S LF KGRYKFW         FWSM TGTV+LR
Sbjct: 1   MKDGDSLPISTSSVAATTVTGKKETGYSALFSKGRYKFWALAAILLLAFWSMLTGTVNLR 60

Query: 55  WS-GNLNSLSNDLDTPIHDDLDVLEMEEREKVVRHMWDVYTNSRRIRLPRFWQEAFEAAY 113
           WS GN+N  ++DL  PIH+DLDVLEMEEREKVV+HMWDVY N RRIRLPRFWQEAFEAAY
Sbjct: 61  WSAGNINHFTDDLVFPIHEDLDVLEMEEREKVVKHMWDVYNNGRRIRLPRFWQEAFEAAY 120

Query: 114 EELTSDAPGVRDAAITEIAKMSVRSIDFDPPPIQSTRAQEFSKSLKQVEKGKGATTSR 171
           EELTSD P V +AAI+EIA+MS+RSI  DPPP+ ST  +E +K+LK  +KG+    S+
Sbjct: 121 EELTSDVPDVVEAAISEIARMSIRSIVIDPPPLHSTNVRELTKTLKLADKGRATQISK 178


>AT4G36660.1 | Symbols:  | Protein of unknown function (DUF1195) |
           chr4:17285953-17287281 REVERSE LENGTH=179
          Length = 179

 Score =  216 bits (551), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 112/179 (62%), Positives = 132/179 (73%), Gaps = 10/179 (5%)

Query: 1   MKDDDGLPTTTA---------PTAKKDNLDSGLFGKGRYKFWXXXXXXXXXFWSMFTGTV 51
           MK+DD LPTTT            +KK++ DS LFG+GRYKFW         FWSMFTGTV
Sbjct: 1   MKEDDALPTTTTTGTATGTAMANSKKESSDSVLFGRGRYKFWAFAAILLLAFWSMFTGTV 60

Query: 52  SLRWS-GNLNSLSNDLDTPIHDDLDVLEMEEREKVVRHMWDVYTNSRRIRLPRFWQEAFE 110
           +LR S GNLN LS DL  P +D+LDVLEMEEREKVV+HMWDVYTNSRRI+LPRFWQEAF 
Sbjct: 61  TLRLSTGNLNRLSEDLGIPNYDNLDVLEMEEREKVVKHMWDVYTNSRRIKLPRFWQEAFV 120

Query: 111 AAYEELTSDAPGVRDAAITEIAKMSVRSIDFDPPPIQSTRAQEFSKSLKQVEKGKGATT 169
           AAYEELTSD PGVR+AAI EIAKMS RSI  DPPP +S  A++  ++LK++     A++
Sbjct: 121 AAYEELTSDVPGVREAAIGEIAKMSARSITLDPPPSRSMSARDLGRNLKRILHKPAASS 179


>AT1G19380.1 | Symbols:  | Protein of unknown function (DUF1195) |
           chr1:6698129-6698662 FORWARD LENGTH=147
          Length = 147

 Score =  116 bits (290), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 72/107 (67%)

Query: 30  YKFWXXXXXXXXXFWSMFTGTVSLRWSGNLNSLSNDLDTPIHDDLDVLEMEEREKVVRHM 89
           YK W         F SM TG+VSL+  G  +S          DDLDVLE+EEREKVVR M
Sbjct: 25  YKLWVLIAVLLLAFGSMLTGSVSLKGIGLFHSADGVNAFSFGDDLDVLEIEEREKVVRQM 84

Query: 90  WDVYTNSRRIRLPRFWQEAFEAAYEELTSDAPGVRDAAITEIAKMSV 136
           WDVY  S  +++PRFW+EAFEAAYE L SD+  VR+AA+++IAK+S+
Sbjct: 85  WDVYGRSGGVKVPRFWREAFEAAYEFLISDSAAVRNAAVSDIAKLSL 131