Miyakogusa Predicted Gene

Lj2g3v1757320.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1757320.1 Non Chatacterized Hit- tr|C6TMS6|C6TMS6_SOYBN
Putative uncharacterized protein (Fragment)
OS=Glycine,73.44,2e-19,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL,CUFF.37803.1
         (70 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50845.1 | Symbols:  | Protein of unknown function (DUF59) | ...   114   2e-26
AT1G68310.1 | Symbols: AE7 | Protein of unknown function (DUF59)...   107   2e-24
AT1G68310.2 | Symbols: AE7 | Protein of unknown function (DUF59)...   107   2e-24
AT3G09380.1 | Symbols:  | Protein of unknown function (DUF59) | ...    76   5e-15

>AT3G50845.1 | Symbols:  | Protein of unknown function (DUF59) |
           chr3:18900107-18901209 REVERSE LENGTH=154
          Length = 154

 Score =  114 bits (284), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/70 (77%), Positives = 60/70 (85%)

Query: 1   MATVIGLCLRVKLKHYFPPHYKVDIKVSPGSHADEESVNKQLNDKERIAAALENPNLRQL 60
           MA +IGLCLR KLK     HYKVDI+VSPGSHADE SVNKQLNDKER+ AALENPNLRQL
Sbjct: 85  MANIIGLCLRAKLKECLQLHYKVDIRVSPGSHADEVSVNKQLNDKERVVAALENPNLRQL 144

Query: 61  VDECLSSNEL 70
           VDEC+ S+E+
Sbjct: 145 VDECIYSDEI 154


>AT1G68310.1 | Symbols: AE7 | Protein of unknown function (DUF59) |
           chr1:25599812-25601239 FORWARD LENGTH=159
          Length = 159

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 59/69 (85%)

Query: 1   MATVIGLCLRVKLKHYFPPHYKVDIKVSPGSHADEESVNKQLNDKERIAAALENPNLRQL 60
           MATVIGLC+RVKL    P  YK+DI+V+PGSHA E+++NKQLNDKER+AAALENPNL ++
Sbjct: 91  MATVIGLCVRVKLLRSLPSRYKIDIRVAPGSHATEDALNKQLNDKERVAAALENPNLVEM 150

Query: 61  VDECLSSNE 69
           VDECL S E
Sbjct: 151 VDECLPSEE 159


>AT1G68310.2 | Symbols: AE7 | Protein of unknown function (DUF59) |
           chr1:25599812-25601239 FORWARD LENGTH=157
          Length = 157

 Score =  107 bits (266), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 59/69 (85%)

Query: 1   MATVIGLCLRVKLKHYFPPHYKVDIKVSPGSHADEESVNKQLNDKERIAAALENPNLRQL 60
           MATVIGLC+RVKL    P  YK+DI+V+PGSHA E+++NKQLNDKER+AAALENPNL ++
Sbjct: 89  MATVIGLCVRVKLLRSLPSRYKIDIRVAPGSHATEDALNKQLNDKERVAAALENPNLVEM 148

Query: 61  VDECLSSNE 69
           VDECL S E
Sbjct: 149 VDECLPSEE 157


>AT3G09380.1 | Symbols:  | Protein of unknown function (DUF59) |
           chr3:2885265-2886116 REVERSE LENGTH=156
          Length = 156

 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 47/65 (72%)

Query: 1   MATVIGLCLRVKLKHYFPPHYKVDIKVSPGSHADEESVNKQLNDKERIAAALENPNLRQL 60
           + T IGLC+ VKL    P  +KVD++V+PGSH  E +VNKQL DKER+ AALENP L  L
Sbjct: 89  LPTHIGLCILVKLVQSLPARFKVDVRVAPGSHDKETTVNKQLGDKERVTAALENPELVAL 148

Query: 61  VDECL 65
           +++ +
Sbjct: 149 LNKMM 153