Miyakogusa Predicted Gene
- Lj2g3v1734790.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1734790.1 Non Chatacterized Hit- tr|G1NPI7|G1NPI7_MELGA
Uncharacterized protein (Fragment) OS=Meleagris gallop,28.04,2e-18,no
description,Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II;
RCC1/BLIP-I,CUFF.37778.1
(433 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48330.2 | Symbols: | Regulator of chromosome condensation (... 475 e-134
AT5G48330.1 | Symbols: | Regulator of chromosome condensation (... 474 e-134
AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensati... 115 5e-26
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 96 4e-20
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 96 5e-20
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 96 7e-20
AT5G16040.1 | Symbols: | Regulator of chromosome condensation (... 94 2e-19
AT5G08710.1 | Symbols: | Regulator of chromosome condensation (... 88 1e-17
AT3G02510.1 | Symbols: | Regulator of chromosome condensation (... 87 3e-17
AT4G14368.1 | Symbols: | Regulator of chromosome condensation (... 86 4e-17
AT3G53830.1 | Symbols: | Regulator of chromosome condensation (... 86 4e-17
AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensat... 85 1e-16
AT5G42140.1 | Symbols: | Regulator of chromosome condensation (... 84 3e-16
AT3G55580.1 | Symbols: | Regulator of chromosome condensation (... 82 6e-16
AT3G23270.1 | Symbols: | Regulator of chromosome condensation (... 80 2e-15
AT3G02510.2 | Symbols: | Regulator of chromosome condensation (... 79 5e-15
AT3G15430.2 | Symbols: | Regulator of chromosome condensation (... 78 2e-14
AT3G15430.1 | Symbols: | Regulator of chromosome condensation (... 78 2e-14
AT3G47660.1 | Symbols: | Regulator of chromosome condensation (... 76 4e-14
AT1G27060.1 | Symbols: | Regulator of chromosome condensation (... 75 7e-14
AT1G19880.1 | Symbols: | Regulator of chromosome condensation (... 75 7e-14
AT3G03790.1 | Symbols: | ankyrin repeat family protein / regula... 75 9e-14
AT3G03790.3 | Symbols: | ankyrin repeat family protein / regula... 75 9e-14
AT3G03790.2 | Symbols: | ankyrin repeat family protein / regula... 75 1e-13
AT5G60870.1 | Symbols: | Regulator of chromosome condensation (... 70 2e-12
AT1G69710.1 | Symbols: | Regulator of chromosome condensation (... 69 8e-12
AT1G65920.1 | Symbols: | Regulator of chromosome condensation (... 67 3e-11
AT5G11580.1 | Symbols: | Regulator of chromosome condensation (... 66 6e-11
AT5G60870.2 | Symbols: | Regulator of chromosome condensation (... 65 1e-10
AT3G26100.2 | Symbols: | Regulator of chromosome condensation (... 64 1e-10
AT3G26100.1 | Symbols: | Regulator of chromosome condensation (... 64 2e-10
AT5G60870.3 | Symbols: | Regulator of chromosome condensation (... 60 3e-09
AT3G02300.1 | Symbols: | Regulator of chromosome condensation (... 59 7e-09
>AT5G48330.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=454
Length = 454
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/431 (58%), Positives = 304/431 (70%), Gaps = 22/431 (5%)
Query: 13 RMFQVKAVQRWMSTVMSFGDGTHGALGLPSSAV-GVGLDAYEPTPIPSLPSDIVSVHAGH 71
R F + +R TVMSFGDG GALGL SS++ G+G+DAYEPT + +LPSDI S+ AGH
Sbjct: 34 RQFTSTSGER--RTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGH 91
Query: 72 YHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXX 131
YHSLAVTS G +WAWGRN+E QLG SR+S +EPK V GLENV
Sbjct: 92 YHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEGLENVNVQAAFASGVVSAA 151
Query: 132 XXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKL 191
WVWG+SKRGQLGLG G+ EA P+++E L+ E+V KVS GWGHALA TVDGK+
Sbjct: 152 IGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKV 211
Query: 192 FGWGYLADGRIGKMGNQLEESPLDS----------AAGTVSDLEVAEKRVLQGMEKENDM 241
FGWGY+ADGR+G +G LE S LDS AAG + +LE AEK+V++ M KENDM
Sbjct: 212 FGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDL-NLEAAEKKVVEAMSKENDM 270
Query: 242 PTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVD 301
P WEP LVEE V DIACG DHSLIL +G LLS GS+ YGQLGR++ DLG+ PVD
Sbjct: 271 PIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVD 330
Query: 302 ISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNLPSLIDALD 361
I+ P+SIAAGLGHSLAIC + G NI SWGWN+S QLGR P NLP ++ D
Sbjct: 331 ITESPISIAAGLGHSLAIC-------NRGERNILSWGWNRSRQLGRGKPENLPREVEGFD 383
Query: 362 GENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAV 421
GE+P SVS GRVHS+ +T KGE WVWG GKNGRLGL SS DE EP+LL+ +EG +LQAV
Sbjct: 384 GESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGC-VLQAV 442
Query: 422 SGFDHNLVLVA 432
+GFDH+L+LVA
Sbjct: 443 AGFDHSLILVA 453
>AT5G48330.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=455
Length = 455
Score = 474 bits (1219), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/432 (59%), Positives = 305/432 (70%), Gaps = 23/432 (5%)
Query: 13 RMFQVKAVQRWMSTVMSFGDGTHGALGLPSSAV-GVGLDAYEPTPIPSLPSDIVSVHAGH 71
R F + +R TVMSFGDG GALGL SS++ G+G+DAYEPT + +LPSDI S+ AGH
Sbjct: 34 RQFTSTSGER--RTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGH 91
Query: 72 YHSLAVTSQGHLWAWGRNNEAQLGP-GFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXX 130
YHSLAVTS G +WAWGRN+E QLG SSR+S +EPK V GLENV
Sbjct: 92 YHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSA 151
Query: 131 XXXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGK 190
WVWG+SKRGQLGLG G+ EA P+++E L+ E+V KVS GWGHALA TVDGK
Sbjct: 152 AIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGK 211
Query: 191 LFGWGYLADGRIGKMGNQLEESPLDS----------AAGTVSDLEVAEKRVLQGMEKEND 240
+FGWGY+ADGR+G +G LE S LDS AAG + +LE AEK+V++ M KEND
Sbjct: 212 VFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDL-NLEAAEKKVVEAMSKEND 270
Query: 241 MPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPV 300
MP WEP LVEE V DIACG DHSLIL +G LLS GS+ YGQLGR++ DLG+ PV
Sbjct: 271 MPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPV 330
Query: 301 DISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNLPSLIDAL 360
DI+ P+SIAAGLGHSLAIC + G NI SWGWN+S QLGR P NLP ++
Sbjct: 331 DITESPISIAAGLGHSLAIC-------NRGERNILSWGWNRSRQLGRGKPENLPREVEGF 383
Query: 361 DGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQA 420
DGE+P SVS GRVHS+ +T KGE WVWG GKNGRLGL SS DE EP+LL+ +EG +LQA
Sbjct: 384 DGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGC-VLQA 442
Query: 421 VSGFDHNLVLVA 432
V+GFDH+L+LVA
Sbjct: 443 VAGFDHSLILVA 454
>AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensation
(RCC1) family protein | chr5:25554821-25558587 REVERSE
LENGTH=440
Length = 440
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 173/397 (43%), Gaps = 66/397 (16%)
Query: 27 VMSFGDGTHGALGLPSSAVGVGLDAYEPTPIPSLPS-DIVSVHAGHYHSLAVTSQG-HLW 84
V S+G G G LG G D PT + +L IVSV G H++A + G ++
Sbjct: 36 VCSWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVY 90
Query: 85 AWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKS 144
+WG + +LG G SS + P + L ++ WG++
Sbjct: 91 SWGWGDFGRLGHGNSSDLFT---PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 147
Query: 145 KRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGK 204
+ GQLGLG +++ P K++A G + V+ G H A T DG L+GWG+ GR G
Sbjct: 148 QNGQLGLGD-TEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW---GRYGN 203
Query: 205 MGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACG 264
+G G +D V E+ G EK + +ACG
Sbjct: 204 LG-----------LGDRTDRLVPERVTSTGGEK--------------------MSMVACG 232
Query: 265 LDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDISFKPVS----IAAGLGHSLAIC 320
H++ + +GAL + G YGQLG + + P + S I+ G H++A+
Sbjct: 233 WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALT 292
Query: 321 ELDESDSSVGTTNIASWGWNQSSQLGRTGPGN-----LPSLIDALDGENPVSVSGGRVHS 375
SD + WGWN+ G+ G GN P + D + V VS G H+
Sbjct: 293 ----SDG-----KLYGWGWNK---FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 340
Query: 376 VALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTL 412
+A+T + ++ WG G NG+LG+ SVD P +++ L
Sbjct: 341 LAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 164/377 (43%), Gaps = 44/377 (11%)
Query: 57 IPSLPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLEN 116
+ + P ++ + AG HS+A+ S + +WGR + QLG G + R S + + G +
Sbjct: 10 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQI 69
Query: 117 VKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVS 176
V W WG G+LG G ++ P ++AL G + +++
Sbjct: 70 VSVTCGADHTVAYSQSGMEVYSWGWGDF--GRLGHGNS-SDLFTPLPIKALHGIRIKQIA 126
Query: 177 FGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGME 236
G H LA T++G++ WG +G++G G D V
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLG--------------LGDTEDSLV---------- 162
Query: 237 KENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLG 296
P+ ++ G+ + +A G +H+ + +G L G YG LG
Sbjct: 163 ----------PQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDR 212
Query: 297 IFPVDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN--LP 354
+ P + V+ G S+ C + S + + ++GW++ QLG + +P
Sbjct: 213 LVP-----ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIP 267
Query: 355 SLIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEG 414
++AL +SGG H++ALT+ G+++ WG K G++G+ +++D+ P+ + +
Sbjct: 268 HKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDD 327
Query: 415 FQILQAVSGFDHNLVLV 431
+++Q G+ H L +
Sbjct: 328 QKVVQVSCGWRHTLAVT 344
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 162/398 (40%), Gaps = 61/398 (15%)
Query: 43 SAVGVGLDAYEPTPIPS-LPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSS 101
S+ + +D+ P + S + D+ ++ G H++ VT QG ++WG +E +LG G S+
Sbjct: 288 SSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN 347
Query: 102 RESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAP 161
+PK++ L + WGK G LG G V+ V
Sbjct: 348 ---IQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPK 404
Query: 162 AKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTV 221
L G +V+ ++ G H T G+LF +G DG G +G+
Sbjct: 405 RVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFG---DGTFGVLGH-------------- 447
Query: 222 SDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFR-------- 273
D +V+ PR V+ L+G+ V ACG+ H+ +
Sbjct: 448 -----------------GDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS 490
Query: 274 ----NGALLSCGSDAYGQLGRARPDLGIFPVDIS--FKPVSIAAGLGHSLAICELDESDS 327
+G L + G G+LG + + P ++ +P GHSL + +
Sbjct: 491 SNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTV-------A 543
Query: 328 SVGTTNIASWGWNQSSQLGRT-GPGNLPSLIDALDGENPVS-VSGGRVHSVALTAKGEMW 385
+ ++ + G QLG + G P+ ++ ++ V ++ G H LT++ E++
Sbjct: 544 LTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVY 603
Query: 386 VWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSG 423
WG G NGRLG D P L+++L+ Q+ G
Sbjct: 604 TWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 30/199 (15%)
Query: 247 PRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGR------ARPDL--GIF 298
P+ +E + V +IACG H++++ + G S G ++ G+LG +P L +
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358
Query: 299 PVDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN-----L 353
+I +A G HS A+ + ++ +WG G G GN +
Sbjct: 359 TTNIEL----VACGEFHSCAV---------TLSGDLYTWG---KGDFGVLGHGNEVSHWV 402
Query: 354 PSLID-ALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTL 412
P ++ L+G + S++ G H+ +T+ G+++ +G G G LG F P +D+L
Sbjct: 403 PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL 462
Query: 413 EGFQILQAVSGFDHNLVLV 431
+G + ++A G H +V
Sbjct: 463 KGLRTVRAACGVWHTAAVV 481
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 308 SIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNL--PSLIDALDGENP 365
+IA G H++ + + ES SWG +LG N+ P LIDAL+ N
Sbjct: 312 NIACGGQHAVLVTKQGES---------FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNI 362
Query: 366 VSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLD-TLEGFQILQAVSGF 424
V+ G HS A+T G+++ WG G G LG + V + P ++ LEG + G
Sbjct: 363 ELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGP 422
Query: 425 DHNLVLVAG 433
H V+ +
Sbjct: 423 YHTAVVTSA 431
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 116/296 (39%), Gaps = 70/296 (23%)
Query: 157 EAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDS 216
+++ P LE+ +V ++ G HA+ T G+ F WG ++GR+G
Sbjct: 295 DSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGH------------ 342
Query: 217 AAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGA 276
G S+++ +P+L++ L ++ +ACG HS + +G
Sbjct: 343 --GVDSNIQ--------------------QPKLIDALNTTNIELVACGEFHSCAVTLSGD 380
Query: 277 LLSCGSDAYGQLGRARPDLGIFPVDISF-----KPVSIAAGLGHSLAICELDESDSSVGT 331
L + G +G LG P ++F SIA G H+ + +S G
Sbjct: 381 LYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVV-------TSAG- 432
Query: 332 TNIASWGWNQSSQLGRTGPGN-----LPSLIDALDGENPVSVSGGRVHSVALT------- 379
+ ++G G G G+ +P +D+L G V + G H+ A+
Sbjct: 433 -QLFTFG---DGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSS 488
Query: 380 -----AKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHNLVL 430
+ G+++ WG G GRLG + + P + L Q G H+L +
Sbjct: 489 SSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACG--HSLTV 542
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 164/399 (41%), Gaps = 63/399 (15%)
Query: 43 SAVGVGLDAYEPTPIPS-LPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSS 101
S++ + +D+ P + S + D+ ++ G H++ VT QG ++WG +E +LG G S+
Sbjct: 326 SSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN 385
Query: 102 RESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAP 161
+ PK++ L + WGK G LG G V+ V P
Sbjct: 386 VQ---HPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWV-P 441
Query: 162 AKLEAL-SGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGT 220
++ L G +V+ ++ G H T G+LF +G DG G +G+
Sbjct: 442 KRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFG---DGTFGVLGH------------- 485
Query: 221 VSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFR------- 273
D +V+ PR V+ L+G+ V ACG+ H+ +
Sbjct: 486 ------------------GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 527
Query: 274 -----NGALLSCGSDAYGQLGRARPDLGIFPVDIS--FKPVSIAAGLGHSLAICELDESD 326
+G L + G +LG + + P ++ +P GHSL +
Sbjct: 528 SSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTV------- 580
Query: 327 SSVGTTNIASWGWNQSSQLGRT-GPGNLPSLID-ALDGENPVSVSGGRVHSVALTAKGEM 384
+ + ++ + G QLG G +P+ +D L ++ G H LT++ E+
Sbjct: 581 ALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEV 640
Query: 385 WVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSG 423
+ WG G NGRLG + D P L+++L+ Q+ G
Sbjct: 641 YTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACG 679
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 247 PRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGR------ARPDL--GIF 298
P+ +E + V +IACG H++++ + G S G ++ G+LG P L +
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396
Query: 299 PVDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN-----L 353
+I +A G HS A+ + ++ +WG G G GN +
Sbjct: 397 TTNIEL----VACGEYHSCAV---------TLSGDLYTWG---KGDFGILGHGNEVSHWV 440
Query: 354 PSLIDAL-DGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTL 412
P ++ L +G + S++ G H+ +T+ G+++ +G G G LG F P +D+L
Sbjct: 441 PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL 500
Query: 413 EGFQILQAVSGFDHNLVLV 431
+G + ++A G H +V
Sbjct: 501 KGLRTVRAACGVWHTAAVV 519
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 308 SIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNL--PSLIDALDGENP 365
+IA G H++ + + ES SWG +LG N+ P LIDAL+ N
Sbjct: 350 NIACGGQHAVLVTKQGES---------FSWGEESEGRLGHGVDSNVQHPKLIDALNTTNI 400
Query: 366 VSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTL-EGFQILQAVSGF 424
V+ G HS A+T G+++ WG G G LG + V + P ++ L EG + G
Sbjct: 401 ELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGP 460
Query: 425 DHNLVLVAG 433
H V+ +
Sbjct: 461 YHTAVVTSA 469
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 166/399 (41%), Gaps = 63/399 (15%)
Query: 43 SAVGVGLDAYEPTPIPS-LPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSS 101
S++ + +D+ P + S + D+ ++ G H++ VT QG ++WG +E +LG G S+
Sbjct: 292 SSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN 351
Query: 102 RESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAP 161
+ PK++ L + WGK G LG G V+ V P
Sbjct: 352 VQ---HPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWV-P 407
Query: 162 AKLEAL-SGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGT 220
++ L G +V+ ++ G H T G+LF +G DG G +G+
Sbjct: 408 KRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFG---DGTFGVLGH------------- 451
Query: 221 VSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFR------- 273
D +V+ PR V+ L+G+ V ACG+ H+ +
Sbjct: 452 ------------------GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 493
Query: 274 -----NGALLSCGSDAYGQLGRARPDLGIFPVDIS--FKPVSIAAGLGHSLAICELDESD 326
+G L + G +LG + + P ++ +P GHSL +
Sbjct: 494 SSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTV------- 546
Query: 327 SSVGTTNIASWGWNQSSQLGRT-GPGNLPSLIDALDGENPV-SVSGGRVHSVALTAKGEM 384
+ + ++ + G QLG G +P+ +D ++ V ++ G H LT++ E+
Sbjct: 547 ALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEV 606
Query: 385 WVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSG 423
+ WG G NGRLG + D P L+++L+ Q+ G
Sbjct: 607 YTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACG 645
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 247 PRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGR------ARPDL--GIF 298
P+ +E + V +IACG H++++ + G S G ++ G+LG P L +
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362
Query: 299 PVDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN-----L 353
+I +A G HS A+ + ++ +WG G G GN +
Sbjct: 363 TTNIEL----VACGEYHSCAV---------TLSGDLYTWG---KGDFGILGHGNEVSHWV 406
Query: 354 PSLIDAL-DGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTL 412
P ++ L +G + S++ G H+ +T+ G+++ +G G G LG F P +D+L
Sbjct: 407 PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL 466
Query: 413 EGFQILQAVSGFDHNLVLV 431
+G + ++A G H +V
Sbjct: 467 KGLRTVRAACGVWHTAAVV 485
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 308 SIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNL--PSLIDALDGENP 365
+IA G H++ + + ES SWG +LG N+ P LIDAL+ N
Sbjct: 316 NIACGGQHAVLVTKQGES---------FSWGEESEGRLGHGVDSNVQHPKLIDALNTTNI 366
Query: 366 VSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTL-EGFQILQAVSGF 424
V+ G HS A+T G+++ WG G G LG + V + P ++ L EG + G
Sbjct: 367 ELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGP 426
Query: 425 DHNLVLVAG 433
H V+ +
Sbjct: 427 YHTAVVTSA 435
>AT5G16040.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:5240860-5243308 REVERSE
LENGTH=396
Length = 396
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 165/405 (40%), Gaps = 81/405 (20%)
Query: 25 STVMSFGDGTHGALGLPS---SAVGVGLDAYEPTPIPSLPSDIVSVHAGHYHSLAVTSQG 81
++V+++G G G LGL + + +DA EP ++ SV G +SLA+ G
Sbjct: 5 TSVIAWGSGEDGQLGLGTDEEKELASVVDALEPF-------NVRSVVGGSRNSLAICDDG 57
Query: 82 HLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVW 141
L+ WG N LG + ES P +V L NVK + W
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTES--TPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAW 115
Query: 142 GKSKRGQLGLGKGVTEAVAPAKLEALSGENVAK------VSFGWGHALAQTVDGKLFGWG 195
G ++ GQ G E P + + + + A+ V+ G H++ T +G ++ WG
Sbjct: 116 GGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWG 175
Query: 196 YLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRG 255
P G + + V + +QG+E
Sbjct: 176 ----------------QPW--PPGDIKQISVPVR--VQGLE------------------- 196
Query: 256 VHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDIS----FKPVSIAA 311
+V IA G H+L L +G L + G++ YGQLG +P+ + V IAA
Sbjct: 197 -NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAA 255
Query: 312 GLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN-------LPSLIDALDGEN 364
G HS A+ T +GW + GR G G+ LP ++ L GE+
Sbjct: 256 GGWHSTAL-----------TNEGEVYGWGRGEH-GRLGFGDNDKSSKMLPQKVNLLAGED 303
Query: 365 PVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILL 409
+ VS G HSVALT G ++ +G G +GRLG V +P+ L
Sbjct: 304 IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLEL 348
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 139/357 (38%), Gaps = 57/357 (15%)
Query: 85 AWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKS 144
AWG + QLG G +E +V LE + WG +
Sbjct: 9 AWGSGEDGQLGLGTDEEKEL---ASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65
Query: 145 KRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGK 204
+RG LG P+ +++L+ + + + G H LA G+ + WG G+ G
Sbjct: 66 QRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG- 124
Query: 205 MGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACG 264
EE D V V KR Q + V +A G
Sbjct: 125 -----EEPSKDETGRPVRRDIVIPKRCAQQLT---------------------VRQVAAG 158
Query: 265 LDHSLILFRNGALLSCGSDAYGQLGRARP--DLGIFPVDISFKPVS----IAAGLGHSLA 318
HS++L R G + + G+ P D+ V + + + IA G H+LA
Sbjct: 159 GTHSVVLTREGYVWT--------WGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLA 210
Query: 319 ICELDESDSSVGTTNIASWGWNQSSQLGR--TGPGNLPSLIDALDGENPVSVSGGRVHSV 376
+ E + +WG N+ QLG T P + P + LD V ++ G HS
Sbjct: 211 LKE---------DGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHST 261
Query: 377 ALTAKGEMWVWGSGKNGRLGLASS--VDEFEPILLDTLEGFQILQAVSGFDHNLVLV 431
ALT +GE++ WG G++GRLG + + P ++ L G I+Q G H++ L
Sbjct: 262 ALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALT 318
>AT5G08710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:2834858-2837866 REVERSE
LENGTH=434
Length = 434
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 177/438 (40%), Gaps = 68/438 (15%)
Query: 19 AVQRWMST------VMSFGDGTHGALGLPSSAVGVGLDAYEPTPIPSLPSD--IVSVHAG 70
RW+S+ +G G +G LGL + LD+ + S SD I +V G
Sbjct: 37 CCSRWVSSESGKRFAAMWGSGDYGRLGLGN------LDSQWTPAVCSALSDHSITAVACG 90
Query: 71 HYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXX 130
H+L +T ++A G N+ QLG S + +P V GL+
Sbjct: 91 GAHTLFLTETRRVFATGLNDCGQLG--VSDVKSHAMDPLEVSGLDK-DILHISAGYYHSA 147
Query: 131 XXXXXXXXWVWGKSKRGQLGLGKGVTEAV-APAKLEALSGENVAKVSFGWGHALAQTVDG 189
++WGK+ GQLGLGK V P K+EAL G + V+ G H++A T G
Sbjct: 148 AITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGG 207
Query: 190 KLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRL 249
++ L G L + L G+ + N T PRL
Sbjct: 208 EV----------------------LSWGGGGSGRLGHGHQSSLFGILRSNSEFT---PRL 242
Query: 250 VEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDISFKPVS- 308
++EL G+ V ++A GL HS NG+ G + ++G P IS P +
Sbjct: 243 IKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAE 302
Query: 309 -IAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGR--TGPGNLPSLIDALDGENP 365
+A G H+ + E + +WG N++ LG T + P ++ E+
Sbjct: 303 EVACGGYHTCVVTRGGE---------LYTWGSNENGCLGTDSTYVSHSPVRVEGPFLEST 353
Query: 366 VS-VSGGRVHSVALT-----------AKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLE 413
VS VS G H+ A++ + G V G G+LG S VD P ++D +
Sbjct: 354 VSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGK 413
Query: 414 GFQILQAVSGFDHNLVLV 431
+ + GF+H ++
Sbjct: 414 NVRAVHISCGFNHTAAVL 431
>AT3G02510.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522086-524536 REVERSE
LENGTH=393
Length = 393
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 164/404 (40%), Gaps = 79/404 (19%)
Query: 25 STVMSFGDGTHGALGLPSSAVGVGLDAYEPTPIPSL-PSDIVSVHAGHYHSLAVTSQGHL 83
++++++G G G LG +G + + +L P + SV +G +SLA+ G +
Sbjct: 5 TSIIAWGSGEDGQLG-----IGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTM 59
Query: 84 WAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGK 143
+ WG N LG + E N P V L NVK + WG
Sbjct: 60 FTWGWNQRGTLGHQPETKTE--NIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGG 117
Query: 144 SKRGQLG-------LGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGY 196
++ GQ G +G+ V + K A V +V+ G H++ T +G ++ WG
Sbjct: 118 NEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPK-LTVRQVAAGGTHSVVLTREGHVWTWG- 175
Query: 197 LADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGV 256
P G + + V + +QG+E
Sbjct: 176 ---------------QPW--PPGDIKQISVPVR--VQGLE-------------------- 196
Query: 257 HVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDIS----FKPVSIAAG 312
+V IA G H+L L +G LL+ G++ YGQLG PV + V IAAG
Sbjct: 197 NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAG 256
Query: 313 LGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN-------LPSLIDALDGENP 365
HS A+ + E +GW + GR G G+ +P ++ L E+
Sbjct: 257 GWHSTALTDKGE-----------VYGWGRGEH-GRLGLGDNDKSSKMVPQKVNLLAEEDI 304
Query: 366 VSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILL 409
+ VS G HSVALT G ++ +G G +GRLG V +P+ L
Sbjct: 305 IQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLEL 348
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 109/283 (38%), Gaps = 62/283 (21%)
Query: 64 IVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXX 123
+ V AG HS+ +T +GH+W WG+ P + + P V GLENV+
Sbjct: 152 VRQVAAGGTHSVVLTREGHVWTWGQ-------PWPPGDIKQISVPVRVQGLENVRLIAVG 204
Query: 124 XXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHAL 183
WG ++ GQLG G P ++ L + ++ G H+
Sbjct: 205 AFHNLALEEDGRLL--AWGNNEYGQLGTGD-TQPTSHPVPVQGLDDLTLVDIAAGGWHST 261
Query: 184 AQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPT 243
A T G+++GWG GR+G +G+ ND +
Sbjct: 262 ALTDKGEVYGWGRGEHGRLG-LGD-------------------------------NDKSS 289
Query: 244 VWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARP---------D 294
P+ V L ++ ++CG HS+ L R+G + S G +G+LG R
Sbjct: 290 KMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELP 349
Query: 295 LGIFPVDISFKPV-----------SIAAGLGHSLAICELDESD 326
+ I P + SF SIA G H+LAI E D
Sbjct: 350 IKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVEWKSDD 392
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 118/303 (38%), Gaps = 60/303 (19%)
Query: 141 WGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADG 200
WG + GQLG+G + A +EAL +V V G ++LA DG +F WG+
Sbjct: 10 WGSGEDGQLGIGTNEEKEWA-CVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGW---N 65
Query: 201 RIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVD 260
+ G +G+Q E K ++P+ V+ L V +
Sbjct: 66 QRGTLGHQPET-------------------------KTENIPS-----RVKALANVKITQ 95
Query: 261 IACGLDHSLILFRNGALLSCGSDAYGQLGR----------ARPDLGIFPVDISFKPV--S 308
A G H L + G + G + YGQ G R D+ + P + K
Sbjct: 96 AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI-VIPKRCAPKLTVRQ 154
Query: 309 IAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNLPSLIDALDGENPVSV 368
+AAG HS+ + T W W Q G ++P + L EN +
Sbjct: 155 VAAGGTHSVVL-----------TREGHVWTWGQPWPPGDIKQISVPVRVQGL--ENVRLI 201
Query: 369 SGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHNL 428
+ G H++AL G + WG+ + G+LG + P+ + L+ ++ +G H+
Sbjct: 202 AVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHST 261
Query: 429 VLV 431
L
Sbjct: 262 ALT 264
>AT4G14368.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr4:8274279-8278810 REVERSE
LENGTH=1106
Length = 1106
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 143/307 (46%), Gaps = 52/307 (16%)
Query: 139 WVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLA 198
+ W + G+LG G V + P +E L+ N+ V+ G H A + G LF WG
Sbjct: 292 FTWEEEAGGRLGHGIQV-DVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWG--- 347
Query: 199 DG--RIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVE-ELRG 255
DG +G +G+ SDL + W P+ V + G
Sbjct: 348 DGIHNVGLLGHG-------------SDL------------------SHWIPKRVSGPVEG 376
Query: 256 VHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDIS----FKPVSIAA 311
+ V+ +ACG HS + NG L + G A+G LG + +P ++ K + +A
Sbjct: 377 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVAC 436
Query: 312 GLGHSLAICE-LDESDSSVGTTNIASWGWNQSSQLGRTGPGN-----LPSLIDALDGENP 365
G+ H++AI E ++++ +S + + +WG ++LG GN LP+ + +L N
Sbjct: 437 GVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGH---GNKETYLLPTCVSSLIDYNF 493
Query: 366 VSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFD 425
++ G +VALT G ++ G +G+LG ++S + ++ D L G + ++ +S D
Sbjct: 494 NQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVG-EFVEEISCGD 552
Query: 426 HNLVLVA 432
H++ ++
Sbjct: 553 HHVAVLT 559
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 152/392 (38%), Gaps = 69/392 (17%)
Query: 43 SAVGVGLDAYEPTPIPS-LPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSS 101
++ V +D P P+ S + D+ + G H VT QG ++ W +LG G
Sbjct: 250 NSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGI--- 306
Query: 102 RESWNEPKMV--VGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAV 159
+ PK+V + L N+ W G G LG G ++ +
Sbjct: 307 QVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWI 366
Query: 160 APAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAG 219
+ G V V+ G H+ T +GKLF +G DG G +G+
Sbjct: 367 PKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFG---DGAFGVLGH------------ 411
Query: 220 TVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSL----ILFRNG 275
D +V P+ V+ L G+ + +ACG+ H++ ++ + G
Sbjct: 412 -------------------GDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTG 452
Query: 276 A------LLSCGSDAYGQLGRARPDLGIFP------VDISFKPVSIAAGLGHSLAICELD 323
L + G +LG + + P +D +F ++ GH+ +
Sbjct: 453 TSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIAC----GHTFTV---- 504
Query: 324 ESDSSVGTTNIASWGWNQSSQLGRTGP-GNLPSLI-DALDGENPVSVSGGRVHSVALTAK 381
+ + ++ + G QLG + G LP L+ D L GE +S G H LT++
Sbjct: 505 ---ALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSR 561
Query: 382 GEMWVWGSGKNGRLGLASSVDEFEPILLDTLE 413
E++ WG G NGRLG D P L++ L
Sbjct: 562 SEVFTWGKGSNGRLGHGDKDDRKTPTLVEALR 593
>AT3G53830.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:19940814-19943592 FORWARD
LENGTH=472
Length = 472
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 158 AVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSA 217
A P+ + G + V+ G H LA + G+++GWGY +G++G +G++++
Sbjct: 202 ATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLG-LGSRIKMVSSPHL 260
Query: 218 AGTVSDLEVAEKRVL---QGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRN 274
+ + ++R QG EP G ++ I+CG HS +
Sbjct: 261 IPCLESIGSGKERSFILHQGGTTTTSAQASREP-------GQYIKAISCGGRHSAAITDA 313
Query: 275 GALLSCGSDAYGQLGRARPDLGIFPVDIS----FKPVSIAAGLGHSLAICELDESDSSVG 330
G L++ G YGQ G + + P+ +S + S+AAGL H++ I SD V
Sbjct: 314 GGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICI----SSDGKV- 368
Query: 331 TTNIASWGWNQSSQLGRTGPGN---LPSLIDA--LDGENPVSVSGGRVHSVALTAKGEMW 385
++G NQ QLG TG + LP L+D L+G++ +VS G HS L G++
Sbjct: 369 ----YAFGGNQFGQLG-TGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLL 423
Query: 386 VWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHNLVL 430
WG K G+LGL + D P + L+G ++ + G+ H L+L
Sbjct: 424 CWGWNKYGQLGLGDTNDRNIPTQVQ-LDGCRLRKVACGWWHTLLL 467
>AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:28906952-28911325 FORWARD LENGTH=1103
Length = 1103
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 158/417 (37%), Gaps = 78/417 (18%)
Query: 42 SSAVGVGLDAYEPTPIPS-LPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSS 100
+S + D P P+ S + D+ + G H+ VT QG ++ WG + +LG G
Sbjct: 260 ASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIG- 318
Query: 101 SRESWNEPKMVVGL---ENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTE 157
+ P++V L +V W G G LG G ++
Sbjct: 319 --KDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISH 376
Query: 158 AVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSA 217
+ +L G +VA VS G H T G+LF +G DG G +G+
Sbjct: 377 WIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFG---DGTFGVLGH---------- 423
Query: 218 AGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFR---- 273
D TV PR VE L G+ + ++CG+ H+ +
Sbjct: 424 ---------------------GDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVT 462
Query: 274 --------NGALLSCGSDAYGQLGRARPDLGIFP------VDISFKPVSIAAGLGHSLAI 319
+G L + G +LG D + P +D +F ++ GHSL
Sbjct: 463 QSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIAC----GHSL-- 516
Query: 320 CELDESDSSVGTT---NIASWGWNQSSQLGR-TGPGNLPSLI-DALDGENPVSVSGGRVH 374
+VG T + + G QLG G LP L+ D L E +S G H
Sbjct: 517 --------TVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYH 568
Query: 375 SVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHNLVLV 431
ALT++ E++ WG G NGRLG D P +++ L+ + G ++ +
Sbjct: 569 VAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAIC 625
>AT5G42140.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:16837547-16841640 REVERSE LENGTH=1073
Length = 1073
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 157/423 (37%), Gaps = 84/423 (19%)
Query: 27 VMSFG-DGTHGALGLPSSAVGVGLDAYEPTPIPS-LPSDIVSVHAGHYHSLAVTSQGHLW 84
V FG D G LG S D P P+ S + D+ + G H+ V+ QG ++
Sbjct: 242 VTKFGADKNIGYLGSRS-------DVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVF 294
Query: 85 AWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKS 144
WG + +LG G + P+++ L + WG
Sbjct: 295 TWGEASGGRLGHGMG---KDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDG 351
Query: 145 KR--GQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRI 202
G LG G V+ + L G +A VS G H T G+LF +G DG
Sbjct: 352 THNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFG---DGTF 408
Query: 203 GKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIA 262
G +G+ D TV+ PR VE L G+ + +A
Sbjct: 409 GVLGH-------------------------------GDKETVFYPREVESLSGLRTIAVA 437
Query: 263 CGLDHSLILFR-----------NGALLSCGSDAYGQLG------RARPDLGIFPVDISFK 305
CG+ H+ + +G L + G +LG R +P +D +F
Sbjct: 438 CGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFH 497
Query: 306 PVSIAAGLGHSLAICELDESDSSVGTT---NIASWGWNQSSQLGR-TGPGNLPSLI-DAL 360
V+ GHSL +VG T + + G QLG G LP L+ D L
Sbjct: 498 RVAC----GHSL----------TVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKL 543
Query: 361 DGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQA 420
+ ++ G H LT++ E++ WG G NGRLG D P L+D L+ +
Sbjct: 544 TKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNI 603
Query: 421 VSG 423
G
Sbjct: 604 ACG 606
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 28/199 (14%)
Query: 247 PRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRAR------PDL--GIF 298
P+ +E + V IACG+ H+ ++ R G + + G + G+LG P L +
Sbjct: 263 PKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLA 322
Query: 299 PVDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN-----L 353
I F +A G H+ A+ T I +WG + + G G G +
Sbjct: 323 ATSIDF----VACGEFHTCAV---------TMTGEIYTWG-DGTHNAGLLGHGTDVSHWI 368
Query: 354 PSLIDA-LDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTL 412
P I L+G SVS G H+ +T+ G+++ +G G G LG F P +++L
Sbjct: 369 PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESL 428
Query: 413 EGFQILQAVSGFDHNLVLV 431
G + + G H +V
Sbjct: 429 SGLRTIAVACGVWHAAAIV 447
>AT3G55580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:20612766-20615730 FORWARD
LENGTH=488
Length = 488
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 174/419 (41%), Gaps = 57/419 (13%)
Query: 40 LPSSAVGVGLDAYEPTPIPSLPSDIV--SVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPG 97
L S V G P P P LP ++ AG H +AVT ++ WG G
Sbjct: 94 LGQSYVTSGKHGETPEPFP-LPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPTGRV 152
Query: 98 FSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGK-----SKRGQLGLG 152
F E + E V V G+ +K+ ++
Sbjct: 153 FGQVDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQ------VEGRGGGEPTKKRRISPS 206
Query: 153 KGVTE----------AVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRI 202
K E + P + G + V+ G H LA + G+++GWGY +G++
Sbjct: 207 KQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQL 266
Query: 203 GKMGNQLEESPLDSAAGTVSDLEVAE--KRVLQGMEKENDMPTVWEPRLVEELRGVHVVD 260
G +G+++ L S+ + +E + K G+ +M +V + + G +V
Sbjct: 267 G-LGSRVR---LVSSPHPIPCIEPSSYGKATSSGV----NMSSVVQ---CGRVLGSYVKK 315
Query: 261 IACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDIS----FKPVSIAAGLGHS 316
IACG HS ++ GALL+ G YGQ G+ D + P +S + +AAGL H+
Sbjct: 316 IACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHT 375
Query: 317 LAICELDESDSSVGTTNIASWGWNQSSQLGRTGPG---NLPSLIDA--LDGENPVSVSGG 371
C + D + ++G NQ QLG TG LP L++A L+ N ++S G
Sbjct: 376 --TCASSDGD-------VYAFGGNQFGQLG-TGCDQAETLPKLLEAPNLENVNVKTISCG 425
Query: 372 RVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHNLVL 430
H+ +T +G ++ WG K G+LG+ +D P + + F G+ H L+L
Sbjct: 426 ARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKDCFP-KNIACGWWHTLLL 483
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 27 VMSFGDGTHGALGLPSSAVGVGLDAYEPTPIPSLPS-DIVSVHAGHYHSLAVTSQGHLWA 85
+++FG G +G G S+ D PT + SL I V AG +H+ +S G ++A
Sbjct: 332 LLTFGWGLYGQCGQGSTD-----DELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYA 386
Query: 86 WGRNNEAQLGPGFSSSRESWNEPKMVVG--LENVKXXXXXXXXXXXXXXXXXXXXWVWGK 143
+G N QLG G + PK++ LENV + WG
Sbjct: 387 FGGNQFGQLGTGCDQAE---TLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGW 443
Query: 144 SKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHAL 183
+K GQLG+G V + APA++ + ++ GW H L
Sbjct: 444 NKYGQLGIGD-VIDRNAPAEVR-IKDCFPKNIACGWWHTL 481
>AT3G23270.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr3:8316436-8320337 FORWARD LENGTH=1045
Length = 1045
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 51/307 (16%)
Query: 139 WVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLA 198
+ WG+ G+LG G V + P +E L+ N+ V+ G H + G LF WG
Sbjct: 273 FTWGEEVGGRLGHGIQV-DISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWG--- 328
Query: 199 DG--RIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVE-ELRG 255
DG +G +G+ SD+ + W P+ V L G
Sbjct: 329 DGIHNVGLLGHG-------------SDI------------------SHWIPKRVSGPLEG 357
Query: 256 VHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDIS----FKPVSIAA 311
+ V+ +ACG HS + NG L + G A+G LG + +P ++ K V +A
Sbjct: 358 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVAC 417
Query: 312 GLGHSLAICE-LDESDSSVGTTNIASWGWNQSSQLGRTGPGN-----LPSLIDALDGENP 365
+ H+ AI E + ++ +S+ + + +WG ++LG GN LP+ + +L N
Sbjct: 418 SIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGH---GNKETYLLPTCVSSLIDYNF 474
Query: 366 VSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFD 425
++ G +VALT G ++ G +G+LG + S + ++ D L G + + G
Sbjct: 475 HKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAH 534
Query: 426 HNLVLVA 432
H VL +
Sbjct: 535 HVAVLTS 541
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 156/407 (38%), Gaps = 71/407 (17%)
Query: 47 VGLDAYEPTPIPS-LPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESW 105
V D P P+ S + D+ + G H VT QG ++ WG +LG G +
Sbjct: 235 VKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGI---QVDI 291
Query: 106 NEPKMV--VGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAK 163
+ PK+V + L N+ W G G LG G ++ +
Sbjct: 292 SRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRV 351
Query: 164 LEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSD 223
L G V V+ G H+ T +GKLF +G DG G +G+ ES
Sbjct: 352 SGPLEGLQVLSVACGTWHSALATANGKLFTFG---DGAFGVLGHGNRES----------- 397
Query: 224 LEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFR---------- 273
V P+ V+ L G+ V +AC + H+ +
Sbjct: 398 --------------------VSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMS 437
Query: 274 NGALLSCGSDAYGQLGRARPDLGIFP------VDISFKPVSIAAGLGHSLAICELDESDS 327
+ L + G +LG + + P +D +F ++ GH+ + +
Sbjct: 438 SRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIAC----GHTFTV-------A 486
Query: 328 SVGTTNIASWGWNQSSQLGRT-GPGNLPSLI-DALDGENPVSVSGGRVHSVALTAKGEMW 385
+ ++ + G QLG + G LP L+ D L GE ++ G H LT++ E++
Sbjct: 487 LTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVF 546
Query: 386 VWGSGKNGRLGLASSVDEFEPILLDTLEGFQI--LQAVSGFDHNLVL 430
WG G NGRLG + D+ P L++ L + L S F ++ +
Sbjct: 547 TWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICI 593
>AT3G02510.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522524-524536 REVERSE
LENGTH=310
Length = 310
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 133/324 (41%), Gaps = 55/324 (16%)
Query: 85 AWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKS 144
AWG + QLG G + +E W +V LE + WG +
Sbjct: 9 AWGSGEDGQLGIGTNEEKE-W--ACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 145 KRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGK 204
+RG LG P++++AL+ + + + G H LA G+ + WG G
Sbjct: 66 QRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG-------GN 118
Query: 205 MGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACG 264
Q E PL G + + ++ +P P+L V +A G
Sbjct: 119 EYGQCGEEPLKDEMG-------------RPVRRDIVIPKRCAPKLT-------VRQVAAG 158
Query: 265 LDHSLILFRNGALLSCGSDAYGQLGRARP--DLGIFPVDISFKPVS----IAAGLGHSLA 318
HS++L R G + + G+ P D+ V + + + IA G H+LA
Sbjct: 159 GTHSVVLTREGHVWT--------WGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLA 210
Query: 319 ICELDESDSSVGTTNIASWGWNQSSQLGR--TGPGNLPSLIDALDGENPVSVSGGRVHSV 376
+ E D + +WG N+ QLG T P + P + LD V ++ G HS
Sbjct: 211 L----EEDG-----RLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHST 261
Query: 377 ALTAKGEMWVWGSGKNGRLGLASS 400
ALT KGE++ WG G++GRLGL +
Sbjct: 262 ALTDKGEVYGWGRGEHGRLGLGDN 285
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 129/334 (38%), Gaps = 69/334 (20%)
Query: 25 STVMSFGDGTHGALGLPSSAVGVGLDAYEPTPIPSL-PSDIVSVHAGHYHSLAVTSQGHL 83
++++++G G G LG +G + + +L P + SV +G +SLA+ G +
Sbjct: 5 TSIIAWGSGEDGQLG-----IGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTM 59
Query: 84 WAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGK 143
+ WG N LG + E N P V L NVK + WG
Sbjct: 60 FTWGWNQRGTLGHQPETKTE--NIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGG 117
Query: 144 SKRGQLG-------LGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGY 196
++ GQ G +G+ V + K A V +V+ G H++ T +G ++ WG
Sbjct: 118 NEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPK-LTVRQVAAGGTHSVVLTREGHVWTWG- 175
Query: 197 LADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGV 256
P G + + V + +QG+E
Sbjct: 176 ---------------QPW--PPGDIKQISVPVR--VQGLE-------------------- 196
Query: 257 HVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDIS----FKPVSIAAG 312
+V IA G H+L L +G LL+ G++ YGQLG PV + V IAAG
Sbjct: 197 NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAG 256
Query: 313 LGHSLAICELDESDSSVGTTNIASWGWNQSSQLG 346
HS A+ + E + WG + +LG
Sbjct: 257 GWHSTALTDKGE---------VYGWGRGEHGRLG 281
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 118/303 (38%), Gaps = 60/303 (19%)
Query: 141 WGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADG 200
WG + GQLG+G + A +EAL +V V G ++LA DG +F WG+
Sbjct: 10 WGSGEDGQLGIGTNEEKEWA-CVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGW---N 65
Query: 201 RIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVD 260
+ G +G+Q E K ++P+ V+ L V +
Sbjct: 66 QRGTLGHQPET-------------------------KTENIPS-----RVKALANVKITQ 95
Query: 261 IACGLDHSLILFRNGALLSCGSDAYGQLGR----------ARPDLGIFPVDISFKPV--S 308
A G H L + G + G + YGQ G R D+ + P + K
Sbjct: 96 AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI-VIPKRCAPKLTVRQ 154
Query: 309 IAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNLPSLIDALDGENPVSV 368
+AAG HS+ + T W W Q G ++P + L EN +
Sbjct: 155 VAAGGTHSVVL-----------TREGHVWTWGQPWPPGDIKQISVPVRVQGL--ENVRLI 201
Query: 369 SGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHNL 428
+ G H++AL G + WG+ + G+LG + P+ + L+ ++ +G H+
Sbjct: 202 AVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHST 261
Query: 429 VLV 431
L
Sbjct: 262 ALT 264
>AT3G15430.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 244 VWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRA----RPDLGIFP 299
++ P+LVE L+G +A GL ++ L R G +CGS+ +GQLG RP +
Sbjct: 204 IFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVE 263
Query: 300 VDISFKP-VSIAAGLGHSLAICELDESDSSVGT-TNIASWGWNQSSQLGRTGPGNLPSLI 357
+ P V IAAG + LA+ + D S S G+ +N Q +L P +I
Sbjct: 264 FLKTIGPVVQIAAGPSYVLAVTQ-DGSVYSFGSGSNFCLGHGEQQDELQ-------PRVI 315
Query: 358 DAL--DGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGF 415
A G + + VS G H+VAL + G ++ WG G G LG D+ P +L L
Sbjct: 316 QAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNC 375
Query: 416 QILQAVSGFDHNLVLVAG 433
+Q + VLV G
Sbjct: 376 LAVQVCARKRKTFVLVEG 393
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 258 VVDIACGLDHSLILFRNGALLSCG---SDAYGQLGRARPDLGIFPVD-ISFKPVS-IAAG 312
V ++ +HS + ++G +L+CG S G L +RP V+ + P +AAG
Sbjct: 165 VAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAG 224
Query: 313 LGHSLAICELDESDSSVGTTNIASWGWNQSSQLGR--TGPGNLPSLIDALDGENP-VSVS 369
L ++ + S G + + G N QLG T +P +++ L P V ++
Sbjct: 225 LHFTVFL-------SREG--HAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIA 275
Query: 370 GGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTL--EGFQILQAVSGFDHN 427
G + +A+T G ++ +GSG N LG DE +P ++ +G IL+ +G +H
Sbjct: 276 AGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHA 335
Query: 428 LVL 430
+ L
Sbjct: 336 VAL 338
>AT3G15430.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 244 VWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRA----RPDLGIFP 299
++ P+LVE L+G +A GL ++ L R G +CGS+ +GQLG RP +
Sbjct: 204 IFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVE 263
Query: 300 VDISFKP-VSIAAGLGHSLAICELDESDSSVGT-TNIASWGWNQSSQLGRTGPGNLPSLI 357
+ P V IAAG + LA+ + D S S G+ +N Q +L P +I
Sbjct: 264 FLKTIGPVVQIAAGPSYVLAVTQ-DGSVYSFGSGSNFCLGHGEQQDELQ-------PRVI 315
Query: 358 DAL--DGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGF 415
A G + + VS G H+VAL + G ++ WG G G LG D+ P +L L
Sbjct: 316 QAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNC 375
Query: 416 QILQAVSGFDHNLVLVAG 433
+Q + VLV G
Sbjct: 376 LAVQVCARKRKTFVLVEG 393
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 258 VVDIACGLDHSLILFRNGALLSCG---SDAYGQLGRARPDLGIFPVD-ISFKPVS-IAAG 312
V ++ +HS + ++G +L+CG S G L +RP V+ + P +AAG
Sbjct: 165 VAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAG 224
Query: 313 LGHSLAICELDESDSSVGTTNIASWGWNQSSQLGR--TGPGNLPSLIDALDGENP-VSVS 369
L ++ + S G + + G N QLG T +P +++ L P V ++
Sbjct: 225 LHFTVFL-------SREG--HAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIA 275
Query: 370 GGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTL--EGFQILQAVSGFDHN 427
G + +A+T G ++ +GSG N LG DE +P ++ +G IL+ +G +H
Sbjct: 276 AGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHA 335
Query: 428 LVL 430
+ L
Sbjct: 336 VAL 338
>AT3G47660.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:17571192-17574805 FORWARD
LENGTH=954
Length = 954
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 159/425 (37%), Gaps = 78/425 (18%)
Query: 29 SFGDGTHGA-LGLPSSAVGVGLDAYEPTPIPS-LPSDIVSVHAGHYHSLAVTSQGHLWAW 86
S GDG G + S+ + D++ P + S + D S+ G +++ VT QG +++W
Sbjct: 264 SIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSW 323
Query: 87 GRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKR 146
G + +LG G S PK++ + WG
Sbjct: 324 GEESGGRLGHGVCS---YVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDH 380
Query: 147 --GQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGK 204
G LGLG G + L + G V +S G H T +GKLF +G DG G
Sbjct: 381 NAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG---DGTFGA 437
Query: 205 MGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACG 264
+G+ D + PR VE L G + ACG
Sbjct: 438 LGH-------------------------------GDRISTNIPREVEALNGCRTIKAACG 466
Query: 265 LDHSLILF-------RNGALLSCGSDAYGQLGRARPDLGIFPVDI------SFKPVSIAA 311
+ HS + +G L + G G+LG + + P + SF+ V+
Sbjct: 467 VWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQ 526
Query: 312 GLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN----LPSLIDALDGENPVS 367
+ +L++ Q +G P + PS I+ G++ V
Sbjct: 527 SITVALSM-------------------SGQVYAMGTADPSHDIVRAPSCIEGGLGKSFVQ 567
Query: 368 -VSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDH 426
V+ G H L +K E++ WG G NG+LG + P L+ L+G Q+ + V G ++
Sbjct: 568 EVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNY 627
Query: 427 NLVLV 431
+
Sbjct: 628 TATIC 632
>AT1G27060.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:9395023-9396673 FORWARD
LENGTH=386
Length = 386
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 156/385 (40%), Gaps = 52/385 (13%)
Query: 27 VMSFGDGTHGALGLPSSAVGVGLDAYEPT--PIPSLPSDIVSVHAGHYHSLAVTSQGHLW 84
V S+G GT G LG D P + SLPS I + G H +A+TS G ++
Sbjct: 17 VWSWGAGTDGQLGTTKLQ-----DELLPQLLSLTSLPS-ISMLACGGAHVIALTSGGKVF 70
Query: 85 AWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKS 144
WGR + QLG G + PK+V ++ + G
Sbjct: 71 TWGRGSSGQLGHG---DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNG 127
Query: 145 KRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGK 204
GQLG G ++ + PAK+ + ++V V+ G H+L ++ G+G G++G
Sbjct: 128 SFGQLGHGDTLSLST-PAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGF 186
Query: 205 MGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACG 264
++++ L P +V L+ V VV I+
Sbjct: 187 SSDRIKSVNL--------------------------------PCVVSGLKDVEVVRISAN 214
Query: 265 LDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDISFKPVSIAAGLGHSLAICELDE 324
DHS + +G S G G P P +SF+ V++ G H+L + +D
Sbjct: 215 GDHSAAISADGQFFSWGRGFCGGPDVHAPQ--SLPSPLSFREVAV--GWNHAL-LLTVDG 269
Query: 325 SDSSVGTTNIASWGWNQSSQLGRTGPGNLPSLIDALDGENPVSVSGGRVHSVALTAKGEM 384
+G+T + QL L + DG + ++ G HS A+T GE+
Sbjct: 270 EVFKLGSTLNKQ---PEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEV 326
Query: 385 WVWGSGKNGRLGLASSVDEFEPILL 409
WG G++G+LGL ++ D+ P L+
Sbjct: 327 KTWGWGEHGQLGLGNTNDQTSPELV 351
>AT1G19880.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:6900648-6903818 REVERSE
LENGTH=538
Length = 538
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 118/307 (38%), Gaps = 62/307 (20%)
Query: 149 LGLGKGVTEA--VAPAKLEALSGENVAKVSFGWG--HALAQTVDGKLFGWGYLADGRIGK 204
+G KG E V+P +L L G N+ V+ G H +A V+G+ + WG G++G
Sbjct: 33 IGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLG- 91
Query: 205 MGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACG 264
G + D PTV V L +V A G
Sbjct: 92 ----------------------------HGDMIQRDRPTV-----VSGLSKHKIVKAAAG 118
Query: 265 LDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDISFKPVSIAAGLGHSLAICELDE 324
+H++++ +G L G + YGQLG G V++ P+ + C D
Sbjct: 119 RNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADF 178
Query: 325 SD--SSVGTTNIASWGWNQSSQLGRTGPGNL----------------PSLIDALDGENPV 366
+ SS +I + G Q QLG P I +L GE V
Sbjct: 179 TVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIV 238
Query: 367 SVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDH 426
V+ G H+VA+ G ++ WG G GRLG DE+ P +D + +L
Sbjct: 239 KVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPP------ 292
Query: 427 NLVLVAG 433
N +L AG
Sbjct: 293 NAILSAG 299
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 153/392 (39%), Gaps = 53/392 (13%)
Query: 56 PIPSLPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLE 115
P+ + V+ +H +A+ +G + WGRN + QLG G R+ P +V GL
Sbjct: 52 PLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRD---RPTVVSGLS 108
Query: 116 NVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKG----VTEAVAPAKLEALSGEN 171
K +G +K GQLGLG V+ V L + +
Sbjct: 109 KHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDE 168
Query: 172 VAKVSFGWGHA--LAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEK 229
V V+ G L+ T + G G++G GT ++ + +
Sbjct: 169 VTNVACGADFTVWLSSTEGASILTAGLPQYGQLGH--------------GTDNEFNMKDS 214
Query: 230 RVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLG 289
V E + P+ + L G +V +ACG +H++ + +NG + + G YG+LG
Sbjct: 215 SVRLAYEAQP------RPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLG 268
Query: 290 -RARPD------LGIFPVDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQS 342
R + D + +F + P +I + G + + C + G + WG
Sbjct: 269 HREQKDEWAPRRIDVFQRNNVLPPNAILSA-GSANSAC-------TAGGGQLYMWG---- 316
Query: 343 SQLGRTGPG-NLPSLIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSV 401
++ G P + L G N + G +H + A WG + G LG +
Sbjct: 317 -KIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHF-VGADSSCISWGHAQYGELGYGPNG 374
Query: 402 DEFE--PILLDTLEGFQILQAVSGFDHNLVLV 431
+ P +D LEG ++ GF H++V+V
Sbjct: 375 QKSSAAPKKVDMLEGMHVMGVACGFCHSMVIV 406
>AT3G03790.1 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1078
Length = 1078
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 162/387 (41%), Gaps = 70/387 (18%)
Query: 21 QRWMSTVMSFGDGTHGALGLPSSAVGVGLDAYEPTPIPSLPSDIVS-VHAGHYHSLAVTS 79
++ S V S+G+G + LG + V P + SL + V A +HS+A+++
Sbjct: 146 EQQSSEVFSWGNGANYQLGTGNQHV-----QKVPGRVDSLHGCFIKLVSAAKFHSVAIST 200
Query: 80 QGHLWAWGRNNEAQLG-PGFS--SSRESWNEPKMVV-GLENVKXXXXXXXXXXXXXXXXX 135
G ++ WG +LG P F S + + P+ V+ GL + +
Sbjct: 201 HGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEG 260
Query: 136 XXXWVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWG 195
+ WG ++ GQLG T+A P K+ +L + VA VS H + G++F WG
Sbjct: 261 GDVYTWGSNREGQLGYTSVDTQAT-PRKVTSLKAKIVA-VSAANKHTAVVSDCGEVFTWG 318
Query: 196 YLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRG 255
+G++G GT ++ + + PRLV+ L+G
Sbjct: 319 CNKEGQLG--------------YGT------------------SNSASNYSPRLVDYLKG 346
Query: 256 VHVVDIACGLDHSLILFRNGALLSCGSDAYG--------QLGRARPDLGIFPVDISFKPV 307
IA H+L+L +G + + G L +A L F +
Sbjct: 347 KVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLT 406
Query: 308 SIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNLPSLIDALDGENPVS 367
+IAAG+ HSLA+ E + A + W S R + +L G+ VS
Sbjct: 407 AIAAGMVHSLALAE-----------DGAFFYWVSSDSNLRC------QQLHSLHGKTVVS 449
Query: 368 VSGGRVHSVALTAKGEMWVWGSGKNGR 394
+S G+ + A+T+ GE+++W GKNG+
Sbjct: 450 ISAGKYWASAVTSTGEVYMW-DGKNGK 475
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 247 PRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDISFKP 306
P V+ L G + ++ HS+ + +G + + G G+LG D+ + P
Sbjct: 174 PGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAV-ITP 232
Query: 307 VSIAAGLGHSLAICELDESDSSVGTT---NIASWGWNQSSQLGRTGPGN--LPSLIDALD 361
+ +GLG +V T ++ +WG N+ QLG T P + +L
Sbjct: 233 RQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLK 292
Query: 362 GENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGL--ASSVDEFEPILLDTLEGFQILQ 419
+ V+VS H+ ++ GE++ WG K G+LG ++S + P L+D L+G
Sbjct: 293 AKI-VAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTA 351
Query: 420 AVSGFDHNLVL 430
S H LVL
Sbjct: 352 IASSKYHTLVL 362
>AT3G03790.3 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-968011 FORWARD LENGTH=1099
Length = 1099
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 143/340 (42%), Gaps = 64/340 (18%)
Query: 67 VHAGHYHSLAVTSQGHLWAWGRNNEAQLG-PGFS--SSRESWNEPKMVV-GLENVKXXXX 122
V A +HS+A+++ G ++ WG +LG P F S + + P+ V+ GL + +
Sbjct: 191 VSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAV 250
Query: 123 XXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHA 182
+ WG ++ GQLG T+A P K+ +L + VA VS H
Sbjct: 251 AAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQAT-PRKVTSLKAKIVA-VSAANKHT 308
Query: 183 LAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMP 242
+ G++F WG +G++G GT ++
Sbjct: 309 AVVSDCGEVFTWGCNKEGQLG--------------YGT------------------SNSA 336
Query: 243 TVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYG--------QLGRARPD 294
+ + PRLV+ L+G IA H+L+L +G + + G L +A
Sbjct: 337 SNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIISRNLKKAGNT 396
Query: 295 LGIFPVDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNLP 354
L F + +IAAG+ HSLA+ E + A + W S R
Sbjct: 397 LLNFHRRRPLRLTAIAAGMVHSLALAE-----------DGAFFYWVSSDSNLRC------ 439
Query: 355 SLIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGR 394
+ +L G+ VS+S G+ + A+T+ GE+++W GKNG+
Sbjct: 440 QQLHSLHGKTVVSISAGKYWASAVTSTGEVYMW-DGKNGK 478
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 44/257 (17%)
Query: 139 WVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLA 198
+ WG QLG G + V P ++++L G + VS H++A + G+++ WG+
Sbjct: 156 FSWGNGANYQLGTGNQHVQKV-PGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 214
Query: 199 DGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHV 258
GR+G E + S V + ++V+ G L V
Sbjct: 215 GGRLGH-----PEFDIHSGQAAV----ITPRQVISG------------------LGSRRV 247
Query: 259 VDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDIS---FKPVSIAAGLGH 315
+A H++I G + + GS+ GQLG D P ++ K V+++A H
Sbjct: 248 KAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKAKIVAVSAANKH 307
Query: 316 SLAICELDESDSSVGTTNIASWGWNQSSQLG----RTGPGNLPSLIDALDGENPVSVSGG 371
+ + + E + +WG N+ QLG + P L+D L G+ +++
Sbjct: 308 TAVVSDCGE---------VFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASS 358
Query: 372 RVHSVALTAKGEMWVWG 388
+ H++ L GE++ WG
Sbjct: 359 KYHTLVLRNDGEVYTWG 375
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 247 PRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDISFKP 306
P V+ L G + ++ HS+ + +G + + G G+LG D+ + P
Sbjct: 177 PGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAV-ITP 235
Query: 307 VSIAAGLGHSLAICELDESDSSVGTT---NIASWGWNQSSQLGRTGPGN--LPSLIDALD 361
+ +GLG +V T ++ +WG N+ QLG T P + +L
Sbjct: 236 RQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLK 295
Query: 362 GENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGL--ASSVDEFEPILLDTLEGFQILQ 419
+ V+VS H+ ++ GE++ WG K G+LG ++S + P L+D L+G
Sbjct: 296 AKI-VAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTA 354
Query: 420 AVSGFDHNLVL 430
S H LVL
Sbjct: 355 IASSKYHTLVL 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 93/222 (41%), Gaps = 25/222 (11%)
Query: 27 VMSFGDGTHGALGLPSSAVGVGLDAYEPTP---IPSLPSDIV-SVHAGHYHSLAVTSQGH 82
V ++G G G LG P + G A TP I L S V +V A +H++ T G
Sbjct: 207 VYTWGFGRGGRLGHPEFDIHSG-QAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGD 265
Query: 83 LWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWG 142
++ WG N E QLG +S ++ P+ V L+ K + WG
Sbjct: 266 VYTWGSNREGQLG---YTSVDTQATPRKVTSLK-AKIVAVSAANKHTAVVSDCGEVFTWG 321
Query: 143 KSKRGQLGLGKGVTEA-VAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGY----- 196
+K GQLG G + + +P ++ L G+ ++ H L DG+++ WG+
Sbjct: 322 CNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTP 381
Query: 197 ---LADGRIGKMGNQL----EESPLD---SAAGTVSDLEVAE 228
+ + K GN L PL AAG V L +AE
Sbjct: 382 RRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAE 423
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 16/101 (15%)
Query: 299 PVDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNL---PS 355
PVD+ PV+ G E SSV T + SWG + QLG TG ++ P
Sbjct: 132 PVDLVSGPVAQVIG-----------EQQSSVAT-EVFSWGNGANYQLG-TGNQHVQKVPG 178
Query: 356 LIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLG 396
+D+L G VS + HSVA++ GE++ WG G+ GRLG
Sbjct: 179 RVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLG 219
>AT3G03790.2 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1081
Length = 1081
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 143/340 (42%), Gaps = 64/340 (18%)
Query: 67 VHAGHYHSLAVTSQGHLWAWGRNNEAQLG-PGFS--SSRESWNEPKMVV-GLENVKXXXX 122
V A +HS+A+++ G ++ WG +LG P F S + + P+ V+ GL + +
Sbjct: 191 VSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAV 250
Query: 123 XXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHA 182
+ WG ++ GQLG T+A P K+ +L + VA VS H
Sbjct: 251 AAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQAT-PRKVTSLKAKIVA-VSAANKHT 308
Query: 183 LAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMP 242
+ G++F WG +G++G GT ++
Sbjct: 309 AVVSDCGEVFTWGCNKEGQLG--------------YGT------------------SNSA 336
Query: 243 TVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYG--------QLGRARPD 294
+ + PRLV+ L+G IA H+L+L +G + + G L +A
Sbjct: 337 SNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIISRNLKKAGNT 396
Query: 295 LGIFPVDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNLP 354
L F + +IAAG+ HSLA+ E + A + W S R
Sbjct: 397 LLNFHRRRPLRLTAIAAGMVHSLALAE-----------DGAFFYWVSSDSNLRC------ 439
Query: 355 SLIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGR 394
+ +L G+ VS+S G+ + A+T+ GE+++W GKNG+
Sbjct: 440 QQLHSLHGKTVVSISAGKYWASAVTSTGEVYMW-DGKNGK 478
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 44/257 (17%)
Query: 139 WVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLA 198
+ WG QLG G + V P ++++L G + VS H++A + G+++ WG+
Sbjct: 156 FSWGNGANYQLGTGNQHVQKV-PGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 214
Query: 199 DGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHV 258
GR+G E + S V + ++V+ G L V
Sbjct: 215 GGRLGH-----PEFDIHSGQAAV----ITPRQVISG------------------LGSRRV 247
Query: 259 VDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDIS---FKPVSIAAGLGH 315
+A H++I G + + GS+ GQLG D P ++ K V+++A H
Sbjct: 248 KAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKAKIVAVSAANKH 307
Query: 316 SLAICELDESDSSVGTTNIASWGWNQSSQLG----RTGPGNLPSLIDALDGENPVSVSGG 371
+ + + E + +WG N+ QLG + P L+D L G+ +++
Sbjct: 308 TAVVSDCGE---------VFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASS 358
Query: 372 RVHSVALTAKGEMWVWG 388
+ H++ L GE++ WG
Sbjct: 359 KYHTLVLRNDGEVYTWG 375
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 247 PRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDISFKP 306
P V+ L G + ++ HS+ + +G + + G G+LG D+ + P
Sbjct: 177 PGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAV-ITP 235
Query: 307 VSIAAGLGHSLAICELDESDSSVGTT---NIASWGWNQSSQLGRTGPGN--LPSLIDALD 361
+ +GLG +V T ++ +WG N+ QLG T P + +L
Sbjct: 236 RQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLK 295
Query: 362 GENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGL--ASSVDEFEPILLDTLEGFQILQ 419
+ V+VS H+ ++ GE++ WG K G+LG ++S + P L+D L+G
Sbjct: 296 AKI-VAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTA 354
Query: 420 AVSGFDHNLVL 430
S H LVL
Sbjct: 355 IASSKYHTLVL 365
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 93/222 (41%), Gaps = 25/222 (11%)
Query: 27 VMSFGDGTHGALGLPSSAVGVGLDAYEPTP---IPSLPSDIV-SVHAGHYHSLAVTSQGH 82
V ++G G G LG P + G A TP I L S V +V A +H++ T G
Sbjct: 207 VYTWGFGRGGRLGHPEFDIHSG-QAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGD 265
Query: 83 LWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWG 142
++ WG N E QLG +S ++ P+ V L+ K + WG
Sbjct: 266 VYTWGSNREGQLG---YTSVDTQATPRKVTSLK-AKIVAVSAANKHTAVVSDCGEVFTWG 321
Query: 143 KSKRGQLGLGKGVTEA-VAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGY----- 196
+K GQLG G + + +P ++ L G+ ++ H L DG+++ WG+
Sbjct: 322 CNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTP 381
Query: 197 ---LADGRIGKMGNQL----EESPLD---SAAGTVSDLEVAE 228
+ + K GN L PL AAG V L +AE
Sbjct: 382 RRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAE 423
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 16/101 (15%)
Query: 299 PVDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNL---PS 355
PVD+ PV+ G E SSV T + SWG + QLG TG ++ P
Sbjct: 132 PVDLVSGPVAQVIG-----------EQQSSVAT-EVFSWGNGANYQLG-TGNQHVQKVPG 178
Query: 356 LIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLG 396
+D+L G VS + HSVA++ GE++ WG G+ GRLG
Sbjct: 179 RVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLG 219
>AT5G60870.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487771 REVERSE
LENGTH=445
Length = 445
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 147/336 (43%), Gaps = 57/336 (16%)
Query: 139 WVWGKSKRGQLGLGKGVTEAVAPAKLEALSGEN-VAKVSFGWGHALAQTVDGKLFGWGYL 197
W+WGK G+LG G+ +V L L E+ + ++ G H++A T G +F WGY
Sbjct: 122 WIWGKGDGGRLGFGQ--ENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGY- 178
Query: 198 ADGRIGKMGNQLEESPL------DSAAGTVSDLEVAEKRV----------LQGMEK---- 237
G G +G+++ L DS +S + + + G E+
Sbjct: 179 --GGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGR 236
Query: 238 --------ENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLG 289
N+ + P V+ L V V ++CG ++ L + G L + G+++ +LG
Sbjct: 237 LGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELG 295
Query: 290 RARPDLGIFPVDI----SFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQL 345
R G P+ + + IA G HSLA+ E + SWG QL
Sbjct: 296 RGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE---------EGKVLSWGHGGHGQL 346
Query: 346 GRTGPGN--LPSLIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVD- 402
G + N +P+ I+AL + V ++ G S A+T GE+W+WG+ K+ +LG+ +
Sbjct: 347 GSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEI 406
Query: 403 EFEPILL------DTLEGFQILQAVSGFDHNLVLVA 432
+ P+ + D + +++ G H L LV+
Sbjct: 407 QTTPVEVNFLTEEDECQPHKVISISIGASHALCLVS 442
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 127/324 (39%), Gaps = 79/324 (24%)
Query: 141 WGKSKRGQLGLG-------------------KGVTEAVAPAKLEALSGENVAKVSFGWGH 181
WG+ GQLG G + + A P +++A S +S G H
Sbjct: 53 WGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISCGLFH 112
Query: 182 ALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDM 241
+ T+DG L+ WG GR+G +EN
Sbjct: 113 S-GLTIDGDLWIWGKGDGGRLG-------------------------------FGQEN-- 138
Query: 242 PTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFP-- 299
+V+ P L + IA G HS+ L G + + G +G LG + P
Sbjct: 139 -SVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRR 197
Query: 300 VDISF--KPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQ---------SSQLGRT 348
VD S+ K +IA H+ AI E E + WG +
Sbjct: 198 VDDSWDCKISAIATSGTHTAAITESGE---------LYMWGREEGDGRLGLGPGRGPNEG 248
Query: 349 GPGNLPSLIDALDGENPV-SVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPI 407
G ++PS + AL PV SVS G ++ALT +G++W WG+ N LG ++ +EP+
Sbjct: 249 GGLSVPSKVKAL--TVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPM 306
Query: 408 LLDTLEGFQILQAVSGFDHNLVLV 431
+ +LEG +I Q G H+L L
Sbjct: 307 PVPSLEGVRITQIACGGYHSLALT 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 54 PTPIPSLPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVG 113
P+ + +L + SV G + ++A+T +G LW WG N+ +LG G + W EP V
Sbjct: 254 PSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGW-EPMPVPS 310
Query: 114 LENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVA 173
LE V+ WG GQLG + V P ++EAL+ + +
Sbjct: 311 LEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKV-PTEIEALADKKIV 369
Query: 174 KVSFGWGHALAQTVDGKLFGWGYLADGRIGKMG-NQLEESPLD 215
++ G + A T G+L+ WG D ++G G +++ +P++
Sbjct: 370 FIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVE 412
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 133/340 (39%), Gaps = 72/340 (21%)
Query: 64 IVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXX 123
I + G HS+A+T QG ++ WG LG +RE P+ V + K
Sbjct: 154 IRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKV-YTREL--VPRRVDDSWDCKISAIA 210
Query: 124 XXXXXXXXXXXXXXXWVWGKSK---------RGQLGLGKGVTEAVAPAKLEALSGENVAK 174
++WG+ + G G++ P+K++AL+ VA
Sbjct: 211 TSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLS---VPSKVKALT-VPVAS 266
Query: 175 VSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQG 234
VS G +A T +G+L+ WG ++ +G+ N L G
Sbjct: 267 VSCGGFFTMALTKEGQLWNWGANSNYELGRGDN------------------------LGG 302
Query: 235 MEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPD 294
WEP V L GV + IACG HSL L G +LS G +GQLG +
Sbjct: 303 ----------WEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLR 352
Query: 295 LGIFPVDISF----KPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGP 350
P +I K V IA+G S AI + E + WG + QLG G
Sbjct: 353 NQKVPTEIEALADKKIVFIASGGSSSAAITDGGE---------LWMWGNAKDFQLGVPGL 403
Query: 351 GNL---PSLIDALDGENP------VSVSGGRVHSVALTAK 381
+ P ++ L E+ +S+S G H++ L ++
Sbjct: 404 PEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 443
>AT1G69710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:26222325-26226530 FORWARD LENGTH=1041
Length = 1041
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 148/388 (38%), Gaps = 63/388 (16%)
Query: 63 DIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXX 122
D ++ G H++ VT QG +++WG +LG G + + +PK + + +
Sbjct: 301 DAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQ---KPKFISSVRGLGFKSL 357
Query: 123 XXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAV-APAKLEA-LSGENVAKVSFGWG 180
+ WG LG G + P ++ L G V+ V+ G
Sbjct: 358 ACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPW 417
Query: 181 HALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKEND 240
H G+LF +G DG G +G+ D
Sbjct: 418 HTAVVASSGQLFTFG---DGTFGALGH-------------------------------GD 443
Query: 241 MPTVWEPRLVEELRGVHVVDIACGLDHSLILFR-------------NGALLSCGSDAYGQ 287
+ PR VE L G+ V +ACG+ H+ + G + + G GQ
Sbjct: 444 RRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQ 503
Query: 288 LGRARPDLGIFP-VDISFKPVSIA-AGLGHSLAICELDESDSSVGTTNIASWGWNQSSQL 345
LG D + P IS +I GHSL + S +S G ++ + G QL
Sbjct: 504 LGHGDNDTKLLPECVISLTNENICQVACGHSLTV-----SRTSRG--HVYTMGSTAYGQL 556
Query: 346 GR-TGPGNLPSLIDALDGENPVS-VSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDE 403
G T GN P ++ E V ++ G H LT+K E++ WG G NG+LG + ++
Sbjct: 557 GNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENK 616
Query: 404 FEPILLDTLEGFQILQAVSGFDHNLVLV 431
EP ++ L Q+ G + V+
Sbjct: 617 REPAVVGFLREKQVKAITCGSNFTAVIC 644
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 122/293 (41%), Gaps = 53/293 (18%)
Query: 156 TEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADG--RIGKMGNQLEESP 213
T+A P + ++ G ++ G H A T G L+ WG DG + +G+ E S
Sbjct: 338 TDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWG---DGTHNVDLLGHGNESS- 393
Query: 214 LDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVE-ELRGVHVVDIACGLDHSLILF 272
W P+ V +L+G++V D+ACG H+ ++
Sbjct: 394 ------------------------------CWIPKRVTGDLQGLYVSDVACGPWHTAVVA 423
Query: 273 RNGALLSCGSDAYGQLGRARPDLGIFPVD----ISFKPVSIAAGLGHSLAICELD----- 323
+G L + G +G LG P + I +A G+ H+ A+ E+
Sbjct: 424 SSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASE 483
Query: 324 -ESDSSVGTTNIASWGWNQSSQLGR--TGPGNLPSLIDALDGENPVSVSGGRVHSVALTA 380
E DSS G + +WG + QLG LP + +L EN V+ G +V+ T+
Sbjct: 484 AEVDSSRG--QVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTS 541
Query: 381 KGEMWVWGSGKNGRLGLASSVDEF-EPILLDTLEGFQILQAVSGFDHNLVLVA 432
+G ++ GS G+LG ++ F E + D +E + + G H VL +
Sbjct: 542 RGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEA-SVEEIACGSYHVAVLTS 593
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 140/353 (39%), Gaps = 52/353 (14%)
Query: 50 DAYEPTPIPSLPS-DIVSVHAGHYHSLAVTSQGHLWAWG--RNNEAQLGPGFSSSRESWN 106
DA +P I S+ S+ G +H+ A+T G L++WG +N LG G SS W
Sbjct: 339 DAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESS--CWI 396
Query: 107 EPKMVVG-LENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAKLE 165
PK V G L+ + + +G G LG G + +V P ++E
Sbjct: 397 -PKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSV-PREVE 454
Query: 166 ALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLE 225
+L G V KV+ G H A + ++ N+ E+ +DS+ G V
Sbjct: 455 SLIGLIVTKVACGVWHTAA-----------------VVEVTNEASEAEVDSSRGQVFTWG 497
Query: 226 VAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRN--GALLSCGSD 283
EK G D T P V L ++ +ACG HSL + R G + + GS
Sbjct: 498 DGEK----GQLGHGDNDTKLLPECVISLTNENICQVACG--HSLTVSRTSRGHVYTMGST 551
Query: 284 AYGQLGRARPDLGIFPVDISFKPV-----SIAAGLGHSLAICELDESDSSVGTTNIASWG 338
AYGQLG G FP + V IA G H + E I +WG
Sbjct: 552 AYGQLGNPTAK-GNFPERVEGDIVEASVEEIACGSYHVAVLTSKSE---------IYTWG 601
Query: 339 WNQSSQLGRTGPGNL--PSLIDALDGENPVSVSGGRVHSVALTAKGEMWVWGS 389
+ QLG N P+++ L + +++ G + + WV GS
Sbjct: 602 KGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVICV--HKWVPGS 652
>AT1G65920.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:24525267-24529204 REVERSE LENGTH=1006
Length = 1006
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 138/319 (43%), Gaps = 27/319 (8%)
Query: 140 VWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLAD 199
+WG + G + K +A++P LE+ + +V +S G HA T G++F WG
Sbjct: 263 IWG-AITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNS 321
Query: 200 GRIG----------KMGNQLEESPLDSAAG----TVSDLEVAEKRV--LQGMEKENDMPT 243
G++G K LE+ + S A T + E E + + G E
Sbjct: 322 GKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQ 381
Query: 244 VWEPRLVEELRG-VHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDI 302
++ + L G + V+ +ACG H+ I+ +G L + GS +G LG + P ++
Sbjct: 382 FLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEV 441
Query: 303 S----FKPVSIAAGLGHSLAICELDESD---SSVGTTNIASWGWNQSSQLGRTGPGN--L 353
K +S++ G H+ AI E ++ + +WG +LG +
Sbjct: 442 ESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLV 501
Query: 354 PSLIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLE 413
P+ + L + + VS G +VAL+ G ++ GS +G+LG + D+ ++L L
Sbjct: 502 PTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLT 561
Query: 414 GFQILQAVSGFDHNLVLVA 432
+ SG H VL +
Sbjct: 562 RQFVKDIASGSHHVAVLTS 580
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 52/322 (16%)
Query: 139 WVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLA 198
+ WG G+LGL + + P ++E+L V V+ A T G+L+ WG +
Sbjct: 314 FCWGNGNSGKLGLKVNI-DIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG-ID 371
Query: 199 DGRIGKMGNQ-LEESPLDSAAGTVSDLEVA----EKRVLQ-------------GMEKEND 240
G I + G+Q L D G+++ L VA ++ G+
Sbjct: 372 GGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGS 431
Query: 241 MPTVWEPRLVEELRGVHVVDIACGLDHSLIL--------FRN----GALLSCGSDAYGQL 288
+ +V +P+ VE LR + V+ ++CG H+ + F N G L + G G+L
Sbjct: 432 LESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRL 491
Query: 289 GRARPDLGIFP------VDISFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQS 342
G A + P +D F VS L +L+I + + + G +
Sbjct: 492 GHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSI-----------SGTVYTMGSSIH 540
Query: 343 SQLG--RTGPGNLPSLIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASS 400
QLG R ++ ++ L + ++ G H LT+ G ++ WG G NG+LGL
Sbjct: 541 GQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDV 600
Query: 401 VDEFEPILLDTLEGFQILQAVS 422
D P+L++ L G +++++++
Sbjct: 601 RDRNSPVLVEPL-GDRLVESIA 621
>AT5G11580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:3718913-3721125 FORWARD
LENGTH=553
Length = 553
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 155/445 (34%), Gaps = 111/445 (24%)
Query: 26 TVMSFGDGTHGALGLPSSAVGVGLDAYEPTPI-PSLPSD-------IVSVHAGHYHSLAV 77
V S+G G G LG G ++ E P+ P+ IV V AG YHSLAV
Sbjct: 36 CVYSWGRGMFGRLG-------TGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAV 88
Query: 78 TSQGHLWAWGRNNEAQLG--------PGF-------SSSRESWNEPKMVVGLENVKXXXX 122
+ G +W WG N QLG P +S S N+ VG ++K
Sbjct: 89 SDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVG-SDLKVCTV 147
Query: 123 XXXXXXXXXXXXXXXXWVWGK--SKRGQLGLGKGVTEAVAPAKLEALSGENVAKVSFGWG 180
W+WG + + T P + G V KV+ G
Sbjct: 148 KAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDE 207
Query: 181 HALAQTVDGK-----------LFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEK 229
H +A G L+ WG G++G + P
Sbjct: 208 HVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARP---------------- 251
Query: 230 RVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHS-LILFRN------GALLSCGS 282
Q +E N + G+ V DIACG H+ L+ +R + G
Sbjct: 252 ---QTVETFN------------QKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGF 296
Query: 283 DAYGQLGRARPDLGIFPVDISFKP-----VSIAAGLGHSLAICELDESDSSVGTTNIASW 337
GQLG P +S P VS+ GL H+ SV ++ W
Sbjct: 297 GENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHT-----------SVVSSEGYVW 345
Query: 338 GWNQSSQLG----------RTGPGNLPSLID--ALDGENPVSVSGGRVHSVALTAKG-EM 384
W LG G ++P I + +PV VS G H+V + G ++
Sbjct: 346 SWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVDGGYKL 405
Query: 385 WVWGSGKNGRLGLASSVDEFEPILL 409
W WG G+NG LG + D + P L+
Sbjct: 406 WSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 97/228 (42%), Gaps = 50/228 (21%)
Query: 238 ENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGI 297
E+ PT+ L+ E ++ +A G H++ L +G + S G +G+LG + +
Sbjct: 2 EDKSPTL----LISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDEL 57
Query: 298 FPVDISF---------KPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRT 348
PV + F + V +AAG HSLA+ + D SV WG+N QLG
Sbjct: 58 VPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSD----DGSVWC-----WGYNIYGQLGFD 108
Query: 349 GPGNL-PSLIDAL-----------DGENPV-------SVSGGRVHSVALTAKGEMWVWG- 388
G +L P LI L D V +V G + S+A+ G +W+WG
Sbjct: 109 GENSLAPCLIKNLFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGN 168
Query: 389 -----SGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHNLVLV 431
S + RL S F PIL G +L+ G +H + LV
Sbjct: 169 VPPQDSEPDPRLSFTSIPIPF-PIL--DFHGRTVLKVACGDEHVVALV 213
>AT5G60870.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487564 REVERSE
LENGTH=383
Length = 383
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 147/343 (42%), Gaps = 64/343 (18%)
Query: 139 WVWGKSKRGQLGLGKGVTEAVAPAKLEALSGEN-VAKVSFGWGHALAQTVDGKLFGWGYL 197
W+WGK G+LG G+ +V L L E+ + ++ G H++A T G +F WGY
Sbjct: 53 WIWGKGDGGRLGFGQ--ENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGY- 109
Query: 198 ADGRIGKMGNQLEESPL------DSAAGTVSDLEVAEKRV----------LQGMEK---- 237
G G +G+++ L DS +S + + + G E+
Sbjct: 110 --GGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGR 167
Query: 238 --------ENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLG 289
N+ + P V+ L V V ++CG ++ L + G L + G+++ +LG
Sbjct: 168 LGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELG 226
Query: 290 RARPDLGIFPVDI----SFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQL 345
R G P+ + + IA G HSLA+ E + SWG QL
Sbjct: 227 RGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE---------EGKVLSWGHGGHGQL 277
Query: 346 GRTGPGN--LPSLIDALDGENPVSVSGGRVHSVA-------LTAKGEMWVWGSGKNGRLG 396
G + N +P+ I+AL + V ++ G S A LT GE+W+WG+ K+ +LG
Sbjct: 278 GSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKDFQLG 337
Query: 397 LASSVD-EFEPILL------DTLEGFQILQAVSGFDHNLVLVA 432
+ + + P+ + D + +++ G H L LV+
Sbjct: 338 VPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVS 380
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 117/288 (40%), Gaps = 60/288 (20%)
Query: 158 AVAPAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSA 217
A P +++A S +S G H+ T+DG L+ WG GR+G
Sbjct: 20 AQTPGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKGDGGRLG-------------- 64
Query: 218 AGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGAL 277
+EN +V+ P L + IA G HS+ L G +
Sbjct: 65 -----------------FGQEN---SVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDV 104
Query: 278 LSCGSDAYGQLGRARPDLGIFP--VDISF--KPVSIAAGLGHSLAICELDESDSSVGTTN 333
+ G +G LG + P VD S+ K +IA H+ AI E E
Sbjct: 105 FTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE--------- 155
Query: 334 IASWGWNQ---------SSQLGRTGPGNLPSLIDALDGENPV-SVSGGRVHSVALTAKGE 383
+ WG + G ++PS + AL PV SVS G ++ALT +G+
Sbjct: 156 LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKAL--TVPVASVSCGGFFTMALTKEGQ 213
Query: 384 MWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHNLVLV 431
+W WG+ N LG ++ +EP+ + +LEG +I Q G H+L L
Sbjct: 214 LWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALT 261
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 134/340 (39%), Gaps = 65/340 (19%)
Query: 64 IVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXX 123
I + G HS+A+T QG ++ WG LG + RE P+ V + K
Sbjct: 85 IRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYT-REL--VPRRVDDSWDCKISAIA 141
Query: 124 XXXXXXXXXXXXXXXWVWGKSK---------RGQLGLGKGVTEAVAPAKLEALSGENVAK 174
++WG+ + G G++ P+K++AL+ VA
Sbjct: 142 TSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLS---VPSKVKALT-VPVAS 197
Query: 175 VSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQG 234
VS G +A T +G+L+ WG ++ +G+ N L G
Sbjct: 198 VSCGGFFTMALTKEGQLWNWGANSNYELGRGDN------------------------LGG 233
Query: 235 MEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPD 294
WEP V L GV + IACG HSL L G +LS G +GQLG +
Sbjct: 234 ----------WEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLR 283
Query: 295 LGIFPVDISF----KPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGP 350
P +I K V IA+G S AI D + G + WG + QLG G
Sbjct: 284 NQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGG--ELWMWGNAKDFQLGVPGL 341
Query: 351 GNL---PSLIDALDGENP------VSVSGGRVHSVALTAK 381
+ P ++ L E+ +S+S G H++ L ++
Sbjct: 342 PEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 381
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 54 PTPIPSLPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVG 113
P+ + +L + SV G + ++A+T +G LW WG N+ +LG G + W EP V
Sbjct: 185 PSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGW-EPMPVPS 241
Query: 114 LENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVA 173
LE V+ WG GQLG + V P ++EAL+ + +
Sbjct: 242 LEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKV-PTEIEALADKKIV 300
Query: 174 KVSFGWGHALA-------QTVDGKLFGWGYLADGRIGKMG-NQLEESPLD 215
++ G + A T G+L+ WG D ++G G +++ +P++
Sbjct: 301 FIASGGSSSAAITGWDWFLTDGGELWMWGNAKDFQLGVPGLPEIQTTPVE 350
>AT3G26100.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538063-9540149 FORWARD
LENGTH=532
Length = 532
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 141/351 (40%), Gaps = 65/351 (18%)
Query: 69 AGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXX 128
AG HS+AVTS+G ++ +G NN QLG G + E+ +P V L+ V+
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTED-EARIQP--VRSLQGVRIIQAAAGAAR 206
Query: 129 XXXXXXXXXXWVWGKSKRGQLGL-GKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTV 187
+ GK G+ G+G P + +L V + + G +
Sbjct: 207 TMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSR 266
Query: 188 DGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEP 247
+GK++ + + DGR +G+Q E + + EP
Sbjct: 267 EGKVYTFSWGNDGR---LGHQTEAADV-------------------------------EP 292
Query: 248 R-LVEELRGVHVVDIACGLDHSLILF--RNG-ALLSCGSDAYGQLGRARPDLGIFPVDI- 302
R L+ L V VV IA G + L L NG ++ S G G+LG +P I
Sbjct: 293 RPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIE 352
Query: 303 -----SFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN----- 352
+ +P +AAG H+ + + + +WGW + LG GN
Sbjct: 353 QFQILNLQPRVVAAGAWHAAVVGQ---------DGRVCTWGWGRYGCLGH---GNEECES 400
Query: 353 LPSLIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDE 403
+P +++ L V V+ G + ++ G+++ +G G++ LG S DE
Sbjct: 401 VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDE 451
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 129/303 (42%), Gaps = 48/303 (15%)
Query: 165 EALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESP----------- 213
EA ++ G GH++A T G+++ +GY G++G G+ +E+
Sbjct: 138 EACCRREKSQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGH-GHTEDEARIQPVRSLQGVR 196
Query: 214 -LDSAAGTVSDLEVAEKRVLQGMEKEN---------DMPTVWEPRLVEELRGVHVVDIAC 263
+ +AAG + +++ + KE+ V P+LV L+ + VV A
Sbjct: 197 IIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAI 256
Query: 264 GLDHSLILFRNGALLSCGSDAYGQLG--------RARPDLGIFPVDISFKPVSIAAGLGH 315
G + +L R G + + G+LG RP LG P++ + V IAAG +
Sbjct: 257 GNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLG--PLE-NVPVVQIAAGYCY 313
Query: 316 SLAI-CELDESDSSVGTTNIASWGWNQSSQLG---RTGPGNLPSLIDALDGEN--PVSVS 369
LA+ C+ + ++ S G +LG RT P +I+ N P V+
Sbjct: 314 LLALACQPN-------GMSVYSVGCGLGGKLGHGSRTDE-KYPRVIEQFQILNLQPRVVA 365
Query: 370 GGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHNLV 429
G H+ + G + WG G+ G LG + E P +++ L + + +G D+
Sbjct: 366 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATG-DYTTF 424
Query: 430 LVA 432
+V+
Sbjct: 425 VVS 427
>AT3G26100.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538458-9540149 FORWARD
LENGTH=432
Length = 432
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 141/351 (40%), Gaps = 65/351 (18%)
Query: 69 AGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKXXXXXXXXXX 128
AG HS+AVTS+G ++ +G NN QLG G + E+ +P V L+ V+
Sbjct: 50 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTED-EARIQP--VRSLQGVRIIQAAAGAAR 106
Query: 129 XXXXXXXXXXWVWGKSKRGQLGL-GKGVTEAVAPAKLEALSGENVAKVSFGWGHALAQTV 187
+ GK G+ G+G P + +L V + + G +
Sbjct: 107 TMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSR 166
Query: 188 DGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEP 247
+GK++ + + DGR +G+Q E + + EP
Sbjct: 167 EGKVYTFSWGNDGR---LGHQTEAADV-------------------------------EP 192
Query: 248 R-LVEELRGVHVVDIACGLDHSLILFR--NG-ALLSCGSDAYGQLGRARPDLGIFPVDI- 302
R L+ L V VV IA G + L L NG ++ S G G+LG +P I
Sbjct: 193 RPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIE 252
Query: 303 -----SFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN----- 352
+ +P +AAG H+ + + + +WGW + LG GN
Sbjct: 253 QFQILNLQPRVVAAGAWHAAVVGQ---------DGRVCTWGWGRYGCLGH---GNEECES 300
Query: 353 LPSLIDALDGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDE 403
+P +++ L V V+ G + ++ G+++ +G G++ LG S DE
Sbjct: 301 VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDE 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 129/303 (42%), Gaps = 48/303 (15%)
Query: 165 EALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESP----------- 213
EA ++ G GH++A T G+++ +GY G++G G+ +E+
Sbjct: 38 EACCRREKSQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGH-GHTEDEARIQPVRSLQGVR 96
Query: 214 -LDSAAGTVSDLEVAEKRVLQGMEKEN---------DMPTVWEPRLVEELRGVHVVDIAC 263
+ +AAG + +++ + KE+ V P+LV L+ + VV A
Sbjct: 97 IIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAI 156
Query: 264 GLDHSLILFRNGALLSCGSDAYGQLGRA--------RPDLGIFPVDISFKPVSIAAGLGH 315
G + +L R G + + G+LG RP LG P++ + V IAAG +
Sbjct: 157 GNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLG--PLE-NVPVVQIAAGYCY 213
Query: 316 SLAI-CELDESDSSVGTTNIASWGWNQSSQLG---RTGPGNLPSLIDALDGEN--PVSVS 369
LA+ C+ + ++ S G +LG RT P +I+ N P V+
Sbjct: 214 LLALACQPN-------GMSVYSVGCGLGGKLGHGSRTDE-KYPRVIEQFQILNLQPRVVA 265
Query: 370 GGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLDTLEGFQILQAVSGFDHNLV 429
G H+ + G + WG G+ G LG + E P +++ L + + +G D+
Sbjct: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATG-DYTTF 324
Query: 430 LVA 432
+V+
Sbjct: 325 VVS 327
>AT5G60870.3 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487257 REVERSE
LENGTH=276
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 54 PTPIPSLPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVG 113
P+ + +L + SV G + ++A+T +G LW WG N+ +LG G + W EP V
Sbjct: 85 PSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGW-EPMPVPS 141
Query: 114 LENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTEAVAPAKLEALSGENVA 173
LE V+ WG GQLG + V P ++EAL+ + +
Sbjct: 142 LEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKV-PTEIEALADKKIV 200
Query: 174 KVSFGWGHALAQTVDGKLFGWGYLADGRIGKMG-NQLEESPLD 215
++ G + A T G+L+ WG D ++G G +++ +P++
Sbjct: 201 FIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVE 243
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 23/199 (11%)
Query: 247 PRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRARPDLGIFPVDI---- 302
P V+ L V V ++CG ++ L + G L + G+++ +LGR G P+ +
Sbjct: 85 PSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLE 143
Query: 303 SFKPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGN--LPSLIDAL 360
+ IA G HSLA+ E + SWG QLG + N +P+ I+AL
Sbjct: 144 GVRITQIACGGYHSLALTE---------EGKVLSWGHGGHGQLGSSSLRNQKVPTEIEAL 194
Query: 361 DGENPVSVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVD-EFEPILL------DTLE 413
+ V ++ G S A+T GE+W+WG+ K+ +LG+ + + P+ + D +
Sbjct: 195 ADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQ 254
Query: 414 GFQILQAVSGFDHNLVLVA 432
+++ G H L LV+
Sbjct: 255 PHKVISISIGASHALCLVS 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 46 GVGLDAYEPTPIPSLPS-DIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRES 104
G L +EP P+PSL I + G YHSLA+T +G + +WG QLG SSS +
Sbjct: 128 GDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLG---SSSLRN 184
Query: 105 WNEPKMVVGLENVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLGLGKGVTE-AVAPAK 163
P + L + K W+WG +K QLG+ G+ E P +
Sbjct: 185 QKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGV-PGLPEIQTTPVE 243
Query: 164 LEALSGEN------VAKVSFGWGHALA 184
+ L+ E+ V +S G HAL
Sbjct: 244 VNFLTEEDECQPHKVISISIGASHALC 270
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 98/234 (41%), Gaps = 57/234 (24%)
Query: 161 PAKLEALSGENVAKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGT 220
P+K++AL+ VA VS G +A T +G+L+ WG ++ +G+ N
Sbjct: 85 PSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDN------------- 130
Query: 221 VSDLEVAEKRVLQGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSC 280
L G WEP V L GV + IACG HSL L G +LS
Sbjct: 131 -----------LGG----------WEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 169
Query: 281 GSDAYGQLGRARPDLGIFPVDISF----KPVSIAAGLGHSLAICELDESDSSVGTTNIAS 336
G +GQLG + P +I K V IA+G S AI + E +
Sbjct: 170 GHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGE---------LWM 220
Query: 337 WGWNQSSQLGRTGPGNL---PSLIDALDGENP------VSVSGGRVHSVALTAK 381
WG + QLG G + P ++ L E+ +S+S G H++ L ++
Sbjct: 221 WGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 274
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 352 NLPSLIDALDGENPV-SVSGGRVHSVALTAKGEMWVWGSGKNGRLGLASSVDEFEPILLD 410
++PS + AL PV SVS G ++ALT +G++W WG+ N LG ++ +EP+ +
Sbjct: 83 SVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVP 140
Query: 411 TLEGFQILQAVSGFDHNLVLV 431
+LEG +I Q G H+L L
Sbjct: 141 SLEGVRITQIACGGYHSLALT 161
>AT3G02300.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:461551-463929 FORWARD
LENGTH=471
Length = 471
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 114/287 (39%), Gaps = 50/287 (17%)
Query: 64 IVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGL--------E 115
I V G H +A++ +G L AWG N + QLG G + E P+++ E
Sbjct: 168 IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTC--EGLQAPRVINAYAKFLDEAPE 225
Query: 116 NVKXXXXXXXXXXXXXXXXXXXXWVWGKSKRGQLG---LGKGVTEAVAPAKLEALSGENV 172
VK + WG GQLG L G E + P ++ L G ++
Sbjct: 226 LVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELI-PRRVVGLDGVSM 284
Query: 173 AKVSFGWGHALAQTVDGKLFGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVL 232
+V+ G H A +++G L+ W G QL P +VS+ + +L
Sbjct: 285 KEVACGGVHTCALSLEGALYAW-------GGGQAGQLGLGPQSGFFFSVSN---GSEMLL 334
Query: 233 QGMEKENDMPTVWEPRLVEELRGVHVVDIACGLDHSLILFRNGALLSCGSDAYGQLGRAR 292
+ ++P + P V +ACG H+L+ R G + G ++YGQ +
Sbjct: 335 R------NVPVLVIP--------TDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEK 380
Query: 293 PDLGIFPVDISF---KPVSIAAGLGHSLA---------ICELDESDS 327
+P + + + +AAG GHS +CE +DS
Sbjct: 381 SSYAWYPSPVDWCVGQVRKLAAGGGHSAVLTDAFSLKELCEFQLADS 427
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 129/321 (40%), Gaps = 75/321 (23%)
Query: 139 WVWGKSKRGQLGLGKG-----VTEAVAPAKLEALSGENVA--KVSFGWGHALAQTVDGKL 191
+VWG ++ GQ G + + + + P +G N +S G H A DG L
Sbjct: 23 YVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASDGSL 82
Query: 192 FGWGYLADGRIGKMGNQLEESPLDSAAGTVSDLEVAEKRVLQGMEKENDMPTVWEPRLVE 251
F WG G++G GT EV K P+ V+
Sbjct: 83 FAWGANEYGQLGD--------------GT----EVGRKH----------------PKKVK 108
Query: 252 ELRGVHVVDIACGLDHSLILFR----NGALLSCGSDAYGQ-LGRARPDL--GIFPVDISF 304
+L+ V ++CG + + +G L + +GQ G P L G FP +
Sbjct: 109 QLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAI 168
Query: 305 KPVSIAAGLGHSLAICELDESDSSVGTTNIASWGWNQSSQLGR--TGPG-NLPSLIDA-- 359
+ VS G H +A+ E + +WG+N+ QLGR T G P +I+A
Sbjct: 169 RQVS--CGTAHVVALSE---------EGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYA 217
Query: 360 --LDGENP-----VSVSGGRVHSVALTAKGEMWVWGSGKNGRLG---LASSVDEFEPILL 409
LD E P + +S G H+ AL+ GE++ WG G G+LG L S E P +
Sbjct: 218 KFLD-EAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRV 276
Query: 410 DTLEGFQILQAVSGFDHNLVL 430
L+G + + G H L
Sbjct: 277 VGLDGVSMKEVACGGVHTCAL 297