Miyakogusa Predicted Gene

Lj2g3v1734650.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1734650.1 tr|Q05JX7|Q05JX7_LOTJA Isoflavone reductase
homolog OS=Lotus japonicus GN=R7 PE=2 SV=1,99.06,0,NmrA,NmrA-like; no
description,NAD(P)-binding domain; no description,NULL; NAD(P)-binding
Rossmann-f,CUFF.38665.1
         (318 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G39230.1 | Symbols:  | NmrA-like negative transcriptional reg...   340   1e-93
AT1G75280.1 | Symbols:  | NmrA-like negative transcriptional reg...   337   7e-93
AT1G75290.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   335   2e-92
AT1G75300.1 | Symbols:  | NmrA-like negative transcriptional reg...   310   9e-85
AT1G19540.1 | Symbols:  | NmrA-like negative transcriptional reg...   290   6e-79
AT4G34540.1 | Symbols:  | NmrA-like negative transcriptional reg...   246   1e-65
AT1G32100.1 | Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 | ...   240   9e-64
AT4G13660.1 | Symbols: ATPRR2, PRR2 | pinoresinol reductase 2 | ...   238   6e-63

>AT4G39230.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr4:18266024-18267604
           REVERSE LENGTH=308
          Length = 308

 Score =  340 bits (871), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 170/319 (53%), Positives = 222/319 (69%), Gaps = 12/319 (3%)

Query: 1   MAPQDRILVIGPTGAIGRHVIWASVKAGNPTYALVRKNSVTIEKPKLITAANPETKEELI 60
           M  + +IL IG TG IG++++ AS ++G+PT  LVR +++T             ++   I
Sbjct: 1   MTSKSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLT-----------SPSRSSTI 49

Query: 61  DNFKSLGVILLEGDISDHESLVKAMKQVDIVICTTGRLLILDQVKIIAAIKEAGNIKRFF 120
           +NFK+LGV  L GD+ DH SLV ++KQ D+VI T G  L+  Q KII+AIKEAGN+KRFF
Sbjct: 50  ENFKNLGVQFLLGDLDDHTSLVNSIKQADVVISTVGHSLLGHQYKIISAIKEAGNVKRFF 109

Query: 121 PSEFGLDVDRHEAVDPVREVFVEKAGIRRVVEAEGIPYTYLCCHAFTGYFLRNLAQLDAT 180
           PSEFG DVDR   V+P +  +  KA IRR +EAEGIPYTY+ C+ F GYFL  LAQ  AT
Sbjct: 110 PSEFGNDVDRVFTVEPAKSAYATKAKIRRTIEAEGIPYTYVSCNFFAGYFLPTLAQPGAT 169

Query: 181 VPPRDKVIILGDGNVKGAYITEADVGTFTVLAANDPRTLNKAVHIRLPANYLTANEIMAL 240
             PRDKVI+LGDGN K  +  E D+GT+T+ A +DPRTLNK ++IR P N  + N++++L
Sbjct: 170 SAPRDKVIVLGDGNPKAVFNKEEDIGTYTINAVDDPRTLNKILYIRPPMNTYSFNDLVSL 229

Query: 241 WEKKIGKTLEKTYVPEEQVLKDIKESGFPHNYLLALYHSQQLKGD-AVYEIDPAKDAEAH 299
           WE KIGKTLE+ YVPEEQ+LK I ES  P N +L+L H   +KG    +EI+P+   EA 
Sbjct: 230 WENKIGKTLERIYVPEEQLLKQIIESSPPLNVMLSLCHCVFVKGGHTSFEIEPSFGVEAS 289

Query: 300 ELYPDVKFTTADEYLNQFV 318
           ELYPDVK+TT DE LNQ+V
Sbjct: 290 ELYPDVKYTTVDEILNQYV 308


>AT1G75280.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr1:28252030-28253355
           FORWARD LENGTH=310
          Length = 310

 Score =  337 bits (863), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 170/316 (53%), Positives = 220/316 (69%), Gaps = 13/316 (4%)

Query: 4   QDRILVIGPTGAIGRHVIWASVKAGNPTYALVRKNSVTIEKPKLITAANPETKEELIDNF 63
           + +ILVIG TG IG+ ++ AS KAG+ T+ALVR+   T+  P          K + + +F
Sbjct: 5   KSKILVIGGTGYIGKFLVEASAKAGHSTFALVRE--ATLSDP---------VKGKTVQSF 53

Query: 64  KSLGVILLEGDISDHESLVKAMKQVDIVICTTGRLLILDQVKIIAAIKEAGNIKRFFPSE 123
           K LGV +L GD++DHESLVKA+KQVD+VI T G + ILDQ KII+AIKEAGN+KRF PSE
Sbjct: 54  KDLGVTILHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSE 113

Query: 124 FGLDVDRHEAVDPVREVFVEKAGIRRVVEAEGIPYTYLCCHAFTGYFLRNLAQLDA--TV 181
           FG+DVDR  AV+P +  F  K  IRR +EAEGIPYTY     F GY+L  L Q +   T 
Sbjct: 114 FGVDVDRTSAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTS 173

Query: 182 PPRDKVIILGDGNVKGAYITEADVGTFTVLAANDPRTLNKAVHIRLPANYLTANEIMALW 241
           PPRDKV ILGDGN K     E D+  +T+ A +DPRTLNK ++I+   N L+ NEI+ LW
Sbjct: 174 PPRDKVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLW 233

Query: 242 EKKIGKTLEKTYVPEEQVLKDIKESGFPHNYLLALYHSQQLKGDAVYEIDPAKDAEAHEL 301
           EKKIGK+LEKT++PEEQ+LK I+ES  P N +L++ H+  + GD    I+P+   EA EL
Sbjct: 234 EKKIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGDTNISIEPSFGVEASEL 293

Query: 302 YPDVKFTTADEYLNQF 317
           YPDVK+T+ DEYL+ F
Sbjct: 294 YPDVKYTSVDEYLSYF 309


>AT1G75290.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr1:28253890-28255173 FORWARD LENGTH=318
          Length = 318

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 171/317 (53%), Positives = 221/317 (69%), Gaps = 14/317 (4%)

Query: 4   QDRILVIGPTGAIGRHVIWASVKAGNPTYALVRKNSVTIEKPKLITAANPETKEELIDNF 63
           + +ILVIG TG IG+ +I ASVKAG+ T ALVR+ S++          +P  K + + NF
Sbjct: 5   KSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASLS----------DP-NKGKTVQNF 53

Query: 64  KSLGVILLEGDISDHESLVKAMKQVDIVICTTGRLLILDQVKIIAAIKEAGNIKRFFPSE 123
           K  GV LL GD++DHESLVKA+KQ D+VI T G + ILDQ KII+AIKEAGN+KRF PSE
Sbjct: 54  KDFGVTLLHGDLNDHESLVKAIKQADVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSE 113

Query: 124 FGLDVDRHEAVDPVREVFVEKAGIRRVVEAEGIPYTYLCCHAFTGYFLRNLAQLDA--TV 181
           FG+DVD+  AV+P +  F  K   RR +EAEGIPYTYL  + F GY+L  L QL+   T 
Sbjct: 114 FGMDVDKSSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTS 173

Query: 182 PPRDKVIILGDGNVKGAYITEADVGTFTVLAANDPRTLNKAVHIRLPANYLTANEIMALW 241
           PPRDKV I GDGNVK     E D+  +T+ A +DPRTLNK ++I  P N L+ NEI+ LW
Sbjct: 174 PPRDKVKIFGDGNVKAVINKEEDIAAYTIKAVDDPRTLNKTLYINPPNNTLSMNEIVTLW 233

Query: 242 EKKIGKTLEKTYVPEEQVLKDIKESGFPHNYLLALYHSQQLKGDAV-YEIDPAKDAEAHE 300
           EKKIGK++EK Y+ EEQ+ K I+ES  P N LL++ H+  +KGD   + I+P+   EA E
Sbjct: 234 EKKIGKSVEKIYMSEEQIFKSIQESPVPFNVLLSINHAVFVKGDQTNFTIEPSFGFEASE 293

Query: 301 LYPDVKFTTADEYLNQF 317
           LYPD+K+T+ DEYL+ F
Sbjct: 294 LYPDIKYTSIDEYLSYF 310


>AT1G75300.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr1:28255552-28256927
           FORWARD LENGTH=322
          Length = 322

 Score =  310 bits (794), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 163/331 (49%), Positives = 216/331 (65%), Gaps = 31/331 (9%)

Query: 4   QDRILVIGPTGAIGRHVIWASVKAGNPTYALVRKNSVTIEKPKLITAANPETKEELIDNF 63
           + +ILVIG TG +G  ++  S KAGNPT+ALVR+ S++          +P  K + I +F
Sbjct: 5   KSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASLS----------DP-VKSKTIQSF 53

Query: 64  KSLGVILLEGDISDHESLVKAMKQVDIVICTTGRLLILDQVKIIAAIKEAGNIKRFFPSE 123
           K LGV +L GD++DHESLVKA+KQVD+VI T G   I DQ KII+AIKEAGN+KRF P+E
Sbjct: 54  KDLGVTILHGDLNDHESLVKAIKQVDVVISTIGHKQIFDQTKIISAIKEAGNVKRFLPAE 113

Query: 124 FGLDVDRHEAVDPVREVFVEKAGIRRVVEAEGIPYTYLCCHAFTGYFLRNLAQL------ 177
           FG+DV+R  AV+P + +F  K  IRR +EAEGIPYTY+  +   G++LR L Q       
Sbjct: 114 FGIDVERTSAVEPAKSLFAGKVQIRRAIEAEGIPYTYVVSNCSAGFYLRTLLQFESGLIS 173

Query: 178 ----------DATVPPRDKVIILGDGNVKGAYITEADVGTFTVLAANDPRTLNKAVHIRL 227
                     D  VPPRDKV ILGDGN K     E DV  + + A +D RTLNK ++I  
Sbjct: 174 HTRDKAIIFGDKNVPPRDKVTILGDGNAKVVINKEEDVAAYMIKAVDDLRTLNKTLYISP 233

Query: 228 PANYLTANEIMALWEKKIGKTLEKTYVPEEQVLKDIKESGFPHNYLLALYHSQQLKGDAV 287
           P N L+ NE++ LWEKKIGK+LEKT++ EEQ+LK I+    P +   ++ H+  +KGD  
Sbjct: 234 PNNILSMNEMVTLWEKKIGKSLEKTHISEEQILKSIQ---VPIDVFKSINHAVFVKGDQT 290

Query: 288 -YEIDPAKDAEAHELYPDVKFTTADEYLNQF 317
            + I+P    EA  LYPDVK+T+ DEYL+QF
Sbjct: 291 SFTIEPWFGEEASVLYPDVKYTSIDEYLSQF 321


>AT1G19540.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr1:6765713-6767247 FORWARD
           LENGTH=310
          Length = 310

 Score =  290 bits (743), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 157/318 (49%), Positives = 212/318 (66%), Gaps = 16/318 (5%)

Query: 6   RILVIGPTGAIGRHVIWASVKAGNPTYALVRKNSVTIEKPKLITAANPETKEELIDNFKS 65
           +ILVIG TG IG+ ++  S K+G+ T+ALVR+ S+          ++P  K +L++ FK 
Sbjct: 4   KILVIGATGLIGKVLVEESAKSGHATFALVREASL----------SDP-VKAQLVERFKD 52

Query: 66  LGVILLEGDISDHESLVKAMKQVDIVICTTGRLL--ILDQVKIIAAIKEAGNIKRFFPSE 123
           LGV +L G +SD ESLVKA+KQVD+VI   GR    IL+Q  II AIKE+GN+KRF PSE
Sbjct: 53  LGVTILYGSLSDKESLVKAIKQVDVVISAVGRFQTEILNQTNIIDAIKESGNVKRFLPSE 112

Query: 124 FGLDVDRHEAVDPVREVFVEKAGIRRVVEAEGIPYTYLCCHAFTGYFLRNLAQ--LDATV 181
           FG DVDR  A++P    F+ KA IRR +EA  IPYTY+    F G F+  L Q  L    
Sbjct: 113 FGNDVDRTVAIEPTLSEFITKAQIRRAIEAAKIPYTYVVSGCFAGLFVPCLGQCHLRLRS 172

Query: 182 PPRDKVIILGDGNVKGAYITEADVGTFTVLAANDPRTLNKAVHIRLPANYLTANEIMALW 241
           PPRDKV I   GN K    TE D+  +T+ A +DPRTLNK ++I  P   ++ N+++ LW
Sbjct: 173 PPRDKVSIYDTGNGKAIVNTEEDIVAYTLKAVDDPRTLNKILYIHPPNYIVSQNDMVGLW 232

Query: 242 EKKIGKTLEKTYVPEEQVLKDIKESGFPHNYLLALYHSQQLKGD-AVYEIDPAKDAEAHE 300
           E+KIGKTLEKTYV EE++LK I+ES  P ++L+ L H+  +K D   + IDP+   EA E
Sbjct: 233 EEKIGKTLEKTYVSEEELLKTIQESKPPMDFLVGLIHTILVKSDFTSFTIDPSFGVEASE 292

Query: 301 LYPDVKFTTADEYLNQFV 318
           LYP+VK+T+ DE+LN+F+
Sbjct: 293 LYPEVKYTSVDEFLNRFI 310


>AT4G34540.1 | Symbols:  | NmrA-like negative transcriptional
           regulator family protein | chr4:16500506-16501932
           FORWARD LENGTH=306
          Length = 306

 Score =  246 bits (629), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 190/319 (59%), Gaps = 23/319 (7%)

Query: 4   QDRILVIGPTGAIGRHVIWASVKAGNPTYALVRKNSVTIEKPKLITAANPETKEELIDNF 63
           + R+L+IG TG +G ++   S+++G+PT+AL+R  +++                   D  
Sbjct: 7   KSRVLIIGATGRLGNYLTRFSIESGHPTFALIRNTTLS-------------------DKL 47

Query: 64  KSL---GVILLEGDISDHESLVKAMKQVDIVICTTGRLLILDQVKIIAAIKEAGNIKRFF 120
           KSL   GV LL+G + D  SL +A+ +VD+VI       +LDQ  ++  IK+AG+IKRF 
Sbjct: 48  KSLSDAGVTLLKGSLEDEGSLAEAVSKVDVVISAIPSKHVLDQKLLVRVIKQAGSIKRFI 107

Query: 121 PSEFGLDVDRHEAVDPVREVFVEKAGIRRVVEAEGIPYTYLCCHAFTGYFLRNLAQLDAT 180
           P+E+G + D+ +  D   + + +K+ IR ++E+EGIPYTY+CC  F    L +L Q    
Sbjct: 108 PAEYGANPDKTQVSDLDHDFYSKKSEIRHMIESEGIPYTYICCGLFMRVLLPSLVQPGLQ 167

Query: 181 VPPRDKVIILGDGNVKGAYITEADVGTFTVLAANDPRTLNKAVHIRLPANYLTANEIMAL 240
            PP DKV + GDGNVK  ++ + DV  FT+   +DPRTLNK +++  P N  + N+++ L
Sbjct: 168 SPPTDKVTVFGDGNVKAVFVNDVDVAAFTIKTIDDPRTLNKTLYLSPPGNICSMNDLVEL 227

Query: 241 WEKKIGKTLEKTYVPEEQVLKDIKESGFPHNYLLALYHSQQLKGDAVY-EIDPAKDAEAH 299
           WE KI K LEKT+  E Q+LK IKE+ +P N  +   +S  +KGD  Y +I+        
Sbjct: 228 WEGKIEKKLEKTFATENQLLKKIKETPYPDNMEMVFIYSVFIKGDHTYFDIESCGGVNGT 287

Query: 300 ELYPDVKFTTADEYLNQFV 318
           ELYPDVK+ T  E+L+  +
Sbjct: 288 ELYPDVKYMTVSEFLDTLL 306


>AT1G32100.1 | Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 |
           chr1:11546472-11547953 REVERSE LENGTH=317
          Length = 317

 Score =  240 bits (613), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 190/320 (59%), Gaps = 20/320 (6%)

Query: 6   RILVIGPTGAIGRHVIWASVKAGNPTYALVRKN-SVTIEKPKLITAANPETKEELIDNFK 64
           R+LV+G TG IG+ ++ A +  G+ TY L R    + IEK +L  +            FK
Sbjct: 11  RVLVVGATGYIGKRIVRACLAEGHETYVLQRPEIGLEIEKVQLFLS------------FK 58

Query: 65  SLGVILLEGDISDHESLVKAMKQVDIVICTTGRLL-----ILDQVKIIAAIKEAGNIKRF 119
            LG  ++EG  SDH+SLV A+K VD+V+     +      IL Q+K++ AIKEAGN+KRF
Sbjct: 59  KLGARIVEGSFSDHQSLVSAVKLVDVVVSAMSGVHFRSHNILVQLKLVEAIKEAGNVKRF 118

Query: 120 FPSEFGLDVDRH-EAVDPVREVFVEKAGIRRVVEAEGIPYTYLCCHAFTGYFLRNLAQLD 178
            PSEFG+D  R   A+ P RE F +K  +R+ +EA GIPYTY+    F  YF  NL+Q+ 
Sbjct: 119 LPSEFGMDPPRMGHALPPGRETFDQKMEVRQAIEAAGIPYTYVVGACFAAYFAGNLSQMV 178

Query: 179 ATVPPRDKVIILGDGNVKGAYITEADVGTFTVLAANDPRTLNKAVHIRLPANYLTANEIM 238
             +PP++KV I GDGNVK  +  E D+  +T    NDPRTLNK V+IR P N LT  E++
Sbjct: 179 TLLPPKEKVNIYGDGNVKVVFADEDDIAKYTAKTLNDPRTLNKTVNIRPPDNVLTQLELV 238

Query: 239 ALWEKKIGKTLEKTYVPEEQVLKDIKESGFPHNYLLALYHSQQLKGDAVYEIDPAKDAEA 298
            +WEK  GK LEKT +  +  L +I++   PH   +  ++    +G  + + +  +D EA
Sbjct: 239 QIWEKLTGKELEKTNIAAQDFLANIEQMEIPHQAGIGHFYHIFYEG-CLTDHEVGEDEEA 297

Query: 299 HELYPDVKFTTADEYLNQFV 318
             LYPDVK+   D+YL  F+
Sbjct: 298 SSLYPDVKYKRMDDYLRMFL 317


>AT4G13660.1 | Symbols: ATPRR2, PRR2 | pinoresinol reductase 2 |
           chr4:7946283-7948252 FORWARD LENGTH=317
          Length = 317

 Score =  238 bits (606), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 136/320 (42%), Positives = 186/320 (58%), Gaps = 20/320 (6%)

Query: 6   RILVIGPTGAIGRHVIWASVKAGNPTYALVRKN-SVTIEKPKLITAANPETKEELIDNFK 64
           R+LV+G TG++GR ++ A +  G+ TY L R    V IEK +L+ +            FK
Sbjct: 11  RVLVVGGTGSLGRRIVSACLAEGHETYVLQRPEIGVDIEKVQLLLS------------FK 58

Query: 65  SLGVILLEGDISDHESLVKAMKQVDIVICTTGRLLILD-----QVKIIAAIKEAGNIKRF 119
            LG  L+EG  SDH+SLV A+KQVD+V+     +         Q+K++AAIKEAGN+KRF
Sbjct: 59  RLGAHLVEGSFSDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRF 118

Query: 120 FPSEFGLDVDRH-EAVDPVREVFVEKAGIRRVVEAEGIPYTYLCCHAFTGYFLRNLAQLD 178
            PSEFG+D  R   A+ P  E F +K  IR  ++A GI +TYL    F  YF  NL+Q+ 
Sbjct: 119 LPSEFGMDPSRMGHAMPPGSETFDQKMEIRNAIKAAGISHTYLVGACFAAYFGGNLSQMG 178

Query: 179 ATVPPRDKVIILGDGNVKGAYITEADVGTFTVLAANDPRTLNKAVHIRLPANYLTANEIM 238
              PP++KV I GDGNVK  ++ E D+  +T    NDPRTLNK V++R   N LT  E++
Sbjct: 179 TLFPPKNKVDIYGDGNVKVVFVDEDDMAKYTAKTLNDPRTLNKTVYVRPTDNILTQMELV 238

Query: 239 ALWEKKIGKTLEKTYVPEEQVLKDIKESGFPHNYLLALYHSQQLKGDAVYEIDPAKDAEA 298
            +WEK   K LEKTYV     L DI++    H   L  ++    +G  + + +   D EA
Sbjct: 239 QIWEKLTEKELEKTYVSGNDFLADIEDKEISHQAGLGHFYHIYYEG-CLTDHEVGDDEEA 297

Query: 299 HELYPDVKFTTADEYLNQFV 318
            +LYPDVK+   DEYL  FV
Sbjct: 298 TKLYPDVKYKRMDEYLKIFV 317