Miyakogusa Predicted Gene

Lj2g3v1730240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1730240.1 Non Chatacterized Hit- tr|B9S6D3|B9S6D3_RICCO
Putative uncharacterized protein OS=Ricinus communis G,45,2e-19,
,CUFF.37915.1
         (137 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18210.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    79   1e-15
AT4G36500.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    69   1e-12
AT3G50900.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    64   2e-11
AT5G66490.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    60   5e-10

>AT2G18210.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT4G36500.1); Has 50 Blast hits to 50 proteins in
           7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr2:7925392-7925766 REVERSE
           LENGTH=124
          Length = 124

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 5/62 (8%)

Query: 79  PTKRATNNPKEKSHPIFSLFE-FRR--KKKATAKPEFTRYLEYMKEGGMWDVNSNQPVIY 135
           PTK    +  + SHPIFSLF+ +RR  KKKATAKPEF+RY EY+KE GMWD+ SN PVIY
Sbjct: 65  PTKTVVTS--KLSHPIFSLFDGYRRHNKKKATAKPEFSRYHEYLKESGMWDLRSNSPVIY 122

Query: 136 FK 137
           FK
Sbjct: 123 FK 124


>AT4G36500.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
           growth stages; BEST Arabidopsis thaliana protein match
           is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast
           hits to 50 proteins in 7 species: Archae - 0; Bacteria -
           0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0;
           Other Eukaryotes - 0 (source: NCBI BLink). |
           chr4:17226139-17226507 REVERSE LENGTH=122
          Length = 122

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/47 (70%), Positives = 39/47 (82%)

Query: 91  SHPIFSLFEFRRKKKATAKPEFTRYLEYMKEGGMWDVNSNQPVIYFK 137
           SHPIFSLF  ++KK  T KPEF+RYLEY+KEGGMWD  +N PVIY+K
Sbjct: 76  SHPIFSLFYGKKKKSTTTKPEFSRYLEYLKEGGMWDARANAPVIYYK 122


>AT3G50900.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G66490.1); Has 45 Blast hits to 45 proteins in
           7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr3:18918122-18918466 FORWARD
           LENGTH=114
          Length = 114

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 33/132 (25%)

Query: 21  MFKSLSTRPGPSKYEKMDKDSAAGGGTSNEEMXXXXXXXXXXXXXXXXXXXXINLHRNPT 80
           MF+++STR     YEK+  + A     S+                           RNP 
Sbjct: 1   MFRAMSTRKIHGGYEKLGDEEARLKRVSS------------------VPASVYGHSRNPV 42

Query: 81  KRATNNPKEK-----SHPIFSLFE--FRRKKK--------ATAKPEFTRYLEYMKEGGMW 125
           +     P  K      HP+FS F+  F+RKKK        ATAKPEF RY+EY++EGG+W
Sbjct: 43  QEVKKTPTAKPTGGSVHPLFSFFDVHFQRKKKNTAKKKSLATAKPEFARYMEYVREGGVW 102

Query: 126 DVNSNQPVIYFK 137
           D +SN PVI+++
Sbjct: 103 DPSSNAPVIHYR 114


>AT5G66490.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: plasma membrane;
           EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9
           growth stages; BEST Arabidopsis thaliana protein match
           is: unknown protein (TAIR:AT3G50900.1); Has 1807 Blast
           hits to 1807 proteins in 277 species: Archae - 0;
           Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
           Viruses - 0; Other Eukaryotes - 339 (source: NCBI
           BLink). | chr5:26547423-26547752 REVERSE LENGTH=109
          Length = 109

 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 59/127 (46%), Gaps = 28/127 (22%)

Query: 21  MFKSLSTRPGPSKYEKMDKDSAAGGGTSNEEMXXXXXXXXXXXXXXXXXXXXINLHRNPT 80
           M ++LSTR     Y+K+  +  AG G                           N H    
Sbjct: 1   MIRALSTRKVRGSYKKLGDEEEAGAGL----------------LEVKPESVPTNPHGQSP 44

Query: 81  KRATNNPKEK----SHPIFSLFEF------RRKKKATAKPEFTRYLEYMKEGGMWDVNSN 130
           K   N P EK    +HP+FS FE       ++K   TAKPEF RYLEY+KEGG+WD  SN
Sbjct: 45  K--VNKPVEKTRGSAHPLFSFFEMSLKRKKKKKSTTTAKPEFARYLEYVKEGGVWDNTSN 102

Query: 131 QPVIYFK 137
            P IY++
Sbjct: 103 GPAIYYR 109