Miyakogusa Predicted Gene

Lj2g3v1730230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1730230.1 Non Chatacterized Hit- tr|B9RPI9|B9RPI9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,60.61,0.0000000000001,seg,NULL; coiled-coil,NULL,CUFF.37908.1
         (426 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50910.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   252   4e-67
AT5G66480.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   173   2e-43

>AT3G50910.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G66480.1); Has 76 Blast hits to 75 proteins in
           28 species: Archae - 0; Bacteria - 10; Metazoa - 7;
           Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes -
           8 (source: NCBI BLink). | chr3:18920189-18921999 FORWARD
           LENGTH=447
          Length = 447

 Score =  252 bits (643), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 176/451 (39%), Positives = 241/451 (53%), Gaps = 51/451 (11%)

Query: 1   MPTFTAIALDTLLEXXXXXXXXXXXXXXEFH-------KLERTTSAPKSKAP------RP 47
           MPTF+AIALD +LE                        KLE+     K K P      RP
Sbjct: 1   MPTFSAIALDRMLEPGASTSVESVPSTTNLFYSKPPISKLEKG----KGKLPNERTVTRP 56

Query: 48  RLKPALYATPEVKPLQDAPSSSFPPSPYIVNHKCRGP-RLLKSSSEASVLS--HQNVNGD 104
            + PALYATP+  PL ++PSS  P   YI+NHK RGP RLLKSSSEA+V+S  HQ    +
Sbjct: 57  LMSPALYATPDAIPLPNSPSSFPPSP-YIINHKSRGPPRLLKSSSEANVVSSSHQKTLEE 115

Query: 105 QKVNDKELENVVSSSAGDLQVTFTKPEL-EDKQVNGVCG-------------------GE 144
           + +   E +  VS        +F   E+ ED   NGV                       
Sbjct: 116 ETIT-AETDVKVSPRRRSTSFSFPITEVTEDDYSNGVHARTVGNYNFDGIVDGPVGNWSP 174

Query: 145 LDRSNGHREPENGSLTDVLLREKALA----LNSERDREIEDFFDTQDSLSFTSNTDGEDN 200
           LD  +G+ + E  +  + L R   L+    + ++++ E EDF+D  +S SFTSNTD E +
Sbjct: 175 LDGKSGNGKSELDNAANGLERVNGLSEPVPIKTDKESESEDFYDPGESASFTSNTDVEGD 234

Query: 201 AGTELSMKFSSPGGEFYDAWEELSSKGTPQKSTTYDVXXXXXXXXXXXXXXIEKRKQAEE 260
           AG E S + ++P GEFYDAW+ELS+    Q S   ++              IEKRKQ EE
Sbjct: 235 AGDESSQRLATPVGEFYDAWDELSTDSGMQSSVN-NIESELSEIRLSLLMEIEKRKQTEE 293

Query: 261 SLNNFRNQWESVRQGLCQAGIILPSDLSVVAEGEQPNHDPVQDLCQQIYVARFISNIVGR 320
           +L   +  W+ +R+ + Q G+ +P D +        N +  ++L  Q+ +ARF+S+ +GR
Sbjct: 294 ALEQMQIHWQRLREQMAQVGLFVPIDPTASTN----NMNLSEELRCQLEIARFVSDSLGR 349

Query: 321 GTVRAEVEKEMEAQLESKNFEITRLLERLRCYETMNREMSQRNQEAVEMAXXXXXXXXXX 380
           G  +AEVE EME+ LE+KNFEITRL +RL  YE +NREMSQRNQEA+E+A          
Sbjct: 350 GMAKAEVEMEMESMLETKNFEITRLSDRLHYYEAVNREMSQRNQEAIEVARRERQKRKKR 409

Query: 381 XXWIWGSLTTVIALSTAAIAWSYLPTGNGSS 411
             WIWGS+   I L +AA+AWSY+P    SS
Sbjct: 410 QRWIWGSIAATITLGSAALAWSYIPAAKPSS 440


>AT5G66480.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT3G50910.1); Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr5:26544737-26546476 REVERSE LENGTH=444
          Length = 444

 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 150/439 (34%), Positives = 218/439 (49%), Gaps = 35/439 (7%)

Query: 1   MPTFTAIALD-TLLEXXXXXXXXXXXXXXEFHKLERTTSAPKSKA-PRPRLKPALYATPE 58
           MPTF+A AL  +L                +   L   +  PK K   RP++ P+LYAT +
Sbjct: 1   MPTFSAAALGRSLNSGTSLSSKFPSTLQSKPSILNDESKQPKEKTFTRPQMSPSLYATTK 60

Query: 59  VKPLQDAPSSSFPPSPYIVNHKCRGPRLLKSSSEASVLSHQNVNGDQKVNDKELENVVSS 118
             P  ++PSS  P   YI+NHK RGP L    SE    SH   +G++K++        +S
Sbjct: 61  EIPHPNSPSSYPPSP-YIINHKARGPVLFNRDSEVDGPSHPITSGEEKISGNVDVEATAS 119

Query: 119 SAGDLQVTFTKPE-LEDKQVNGV----------------CGGELDRSNGHREPENGSL-- 159
            +    ++F   E +     NGV                 G  L+  +G R+  NG +  
Sbjct: 120 LSKSTSLSFPITEAIAVDHTNGVHTQGIHERPVWDCSPPLGTFLNEKSG-RDISNGGIGS 178

Query: 160 ---TDVLLREKALA----LNSERDREIEDFFDTQDSLSFTSNTDGEDNAGTELSMKFSSP 212
              T  L  +  L     + ++++ E E+F++  + +SFTSNT+ ED    E S   ++ 
Sbjct: 179 NNATSNLEWQSYLLEPVRIKADKELEPENFYNPGELVSFTSNTEVEDFERAESSHSLATH 238

Query: 213 GGEFYDAWEELSSKGTPQKSTTYDVXXXXXXXXXXXXXXIEKRKQAEESLNNFRNQWESV 272
            GEFYDA +ELS+    Q S   ++              IE+R+QAE +L   +  W  +
Sbjct: 239 VGEFYDACDELSTDSGMQSSAN-NIESEVREMRLGLLMEIERRRQAEATLEQMQVHWRRL 297

Query: 273 RQGLCQAGIILPSDLSVVAEGEQPNHDPVQDLCQQIYVARFISNIVGRGTVRAEVEKEME 332
           R  L   G+ LP D +      Q + +   +L  Q+ V RF+S+ +G    + EVE EME
Sbjct: 298 RDQLADVGMFLPLDPT----RSQYSMNLADELRCQLEVTRFVSDTLGSDLAKTEVEMEME 353

Query: 333 AQLESKNFEITRLLERLRCYETMNREMSQRNQEAVEMAXXXXXXXXXXXXWIWGSLTTVI 392
           A+LE+KNFEITRL +RL  YET+N+EMSQRNQEA+E+A            WIWGS+   I
Sbjct: 354 AELEAKNFEITRLSDRLHYYETVNQEMSQRNQEAIEVARRDGQKRKRRQRWIWGSIAATI 413

Query: 393 ALSTAAIAWSYLPTGNGSS 411
            L +  +AWSYLP G  SS
Sbjct: 414 TLGSGVLAWSYLPPGMLSS 432