Miyakogusa Predicted Gene

Lj2g3v1728930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1728930.1 tr|B9HFC0|B9HFC0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_802970 PE=4
SV=1,63.77,5e-19,Methyltransf_29,Putative
S-adenosyl-L-methionine-dependent methyltransferase; SUBFAMILY NOT
NAMED,NU,CUFF.37742.1
         (97 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51070.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   102   4e-23
AT5G64030.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    82   1e-16
AT1G29470.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    79   9e-16
AT1G29470.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    79   9e-16
AT2G34300.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    77   3e-15
AT2G34300.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    77   3e-15
AT1G19430.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    70   4e-13
AT2G40280.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    65   9e-12
AT3G56080.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    50   3e-07
AT5G06050.1 | Symbols:  | Putative methyltransferase family prot...    49   6e-07
AT4G10440.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    47   3e-06
AT2G39750.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    47   4e-06
AT4G14360.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    46   4e-06
AT4G14360.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    46   4e-06
AT4G00740.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    46   5e-06
AT5G04060.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    46   6e-06
AT1G26850.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    45   7e-06
AT1G26850.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    45   7e-06

>AT3G51070.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:18969068-18972291 FORWARD LENGTH=895
          Length = 895

 Score =  102 bits (255), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/68 (64%), Positives = 58/68 (85%), Gaps = 2/68 (2%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEI--TYTKEQEGMLCAKR 86
           RC L+PVMAEVDRI+RPGG LIVRDE N I+EVE +LKSLHW++  T++K QEG+L A++
Sbjct: 827 RCNLVPVMAEVDRIVRPGGKLIVRDESNVIREVENMLKSLHWDVHLTFSKHQEGILSAQK 886

Query: 87  GTWRPDSA 94
           G WRP+++
Sbjct: 887 GFWRPETS 894


>AT5G64030.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:25624965-25628257 FORWARD LENGTH=829
          Length = 829

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/65 (52%), Positives = 50/65 (76%), Gaps = 2/65 (3%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEI--TYTKEQEGMLCAKR 86
           RC L  V+AEVDR++RP G LIVRD+  TI++VE ++K++ WE+  TY+KE+EG+L  ++
Sbjct: 754 RCNLTAVIAEVDRVLRPEGKLIVRDDAETIQQVEGMVKAMKWEVRMTYSKEKEGLLSVQK 813

Query: 87  GTWRP 91
             WRP
Sbjct: 814 SIWRP 818


>AT1G29470.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:10310424-10313369 REVERSE LENGTH=770
          Length = 770

 Score = 78.6 bits (192), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 2/68 (2%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEI--TYTKEQEGMLCAKR 86
           RC L+ VMAEVDRI+RP GT IVRD+  TI E+E ++KS+ W +  T++K+ EG+L  ++
Sbjct: 695 RCNLVGVMAEVDRILRPQGTFIVRDDMETIGEIEKMVKSMKWNVRMTHSKDGEGLLSVQK 754

Query: 87  GTWRPDSA 94
             WRP  A
Sbjct: 755 SWWRPTEA 762


>AT1G29470.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:10310424-10313369 REVERSE LENGTH=770
          Length = 770

 Score = 78.6 bits (192), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 2/68 (2%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEI--TYTKEQEGMLCAKR 86
           RC L+ VMAEVDRI+RP GT IVRD+  TI E+E ++KS+ W +  T++K+ EG+L  ++
Sbjct: 695 RCNLVGVMAEVDRILRPQGTFIVRDDMETIGEIEKMVKSMKWNVRMTHSKDGEGLLSVQK 754

Query: 87  GTWRPDSA 94
             WRP  A
Sbjct: 755 SWWRPTEA 762


>AT2G34300.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr2:14473916-14476811 REVERSE LENGTH=770
          Length = 770

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 2/66 (3%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEI--TYTKEQEGMLCAKR 86
           RC L+ VMAE+DRI+RP GT I+RD+  T+ EVE ++KS+ W++  T +K+ EG+L  ++
Sbjct: 695 RCNLVSVMAEIDRILRPQGTFIIRDDMETLGEVEKMVKSMKWKVKMTQSKDNEGLLSIEK 754

Query: 87  GTWRPD 92
             WRP+
Sbjct: 755 SWWRPE 760


>AT2G34300.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr2:14473916-14476811 REVERSE LENGTH=770
          Length = 770

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 2/66 (3%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEI--TYTKEQEGMLCAKR 86
           RC L+ VMAE+DRI+RP GT I+RD+  T+ EVE ++KS+ W++  T +K+ EG+L  ++
Sbjct: 695 RCNLVSVMAEIDRILRPQGTFIIRDDMETLGEVEKMVKSMKWKVKMTQSKDNEGLLSIEK 754

Query: 87  GTWRPD 92
             WRP+
Sbjct: 755 SWWRPE 760


>AT1G19430.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:6724669-6727533 REVERSE LENGTH=724
          Length = 724

 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 3/66 (4%)

Query: 29  RCKL-IPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEI--TYTKEQEGMLCAK 85
           RCK    ++ E+DR+ RPGG ++VRD+   ++ +E +L+SLHWEI  TY +++EGMLCA+
Sbjct: 659 RCKQPASIVVEMDRLTRPGGWVVVRDKVEILEPLEEILRSLHWEIRMTYAQDKEGMLCAQ 718

Query: 86  RGTWRP 91
           +  WRP
Sbjct: 719 KTLWRP 724


>AT2G40280.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr2:16825707-16828300 REVERSE LENGTH=589
          Length = 589

 Score = 65.1 bits (157), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 2/63 (3%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEGMLCAKRGT 88
           RC+++ V+AE+DRI+RPGG L+V+D   TI ++E++L SLHW     +++   L  ++G 
Sbjct: 523 RCEIVQVVAEIDRIVRPGGYLVVQDNMETIMKLESILGSLHWSTKIYEDR--FLVGRKGF 580

Query: 89  WRP 91
           WRP
Sbjct: 581 WRP 583


>AT3G56080.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:20810526-20812988 REVERSE LENGTH=610
          Length = 610

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEGMLCAKRGT 88
           RC L+ V+ E+DRI+RPGG L V+D    +K++  +L SL W     + +   L   + +
Sbjct: 550 RCDLMEVVVEIDRILRPGGYLAVQDTVEMLKKLNPILLSLRWSTNLYRGK--FLVGLKSS 607

Query: 89  WRP 91
           WRP
Sbjct: 608 WRP 610


>AT5G06050.1 | Symbols:  | Putative methyltransferase family protein
           | chr5:1820196-1823572 FORWARD LENGTH=682
          Length = 682

 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEG-------M 81
           RC +  +M E+DRI+RPGG + +RD  N   E++ +  ++ W  +  +  EG       +
Sbjct: 598 RCNMTTMMLEMDRILRPGGRVYIRDTINVTSELQEIGNAMRWHTSLRETAEGPHSSYRVL 657

Query: 82  LCAKR 86
           LC KR
Sbjct: 658 LCEKR 662


>AT4G10440.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:6459728-6461932 REVERSE LENGTH=633
          Length = 633

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 16  LHQNDLHLLFWLLRCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYT 75
           +H   L  L+   RC L  ++ E+DRI+RP GT+++RD   T+ +VE ++K + W+    
Sbjct: 538 IHAGGLFSLY-EHRCDLTLILLEMDRILRPEGTVVLRDNVETLNKVEKIVKGMKWKSQIV 596

Query: 76  KEQEG 80
             ++G
Sbjct: 597 DHEKG 601


>AT2G39750.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr2:16578986-16582281 REVERSE LENGTH=694
          Length = 694

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 7/65 (10%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYTKEQEG-------M 81
           RC++  ++ E+DRI+RPGG   +RD  + + E++ + K++ W  +     EG       +
Sbjct: 626 RCEMSTILLEMDRILRPGGRAYIRDSIDVMDEIQEITKAMGWHTSLRDTSEGPHASYRIL 685

Query: 82  LCAKR 86
            C KR
Sbjct: 686 TCEKR 690


>AT4G14360.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:8267869-8270191 REVERSE LENGTH=608
          Length = 608

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 31/47 (65%)

Query: 30  CKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYTK 76
           C  + ++ E+DRI+RP G +I+RD+   +  V+  LK+LHWE   TK
Sbjct: 531 CSEVDLLLEMDRILRPSGFIIIRDKQRVVDFVKKYLKALHWEEVGTK 577


>AT4G14360.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:8267869-8270191 REVERSE LENGTH=608
          Length = 608

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 31/47 (65%)

Query: 30  CKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYTK 76
           C  + ++ E+DRI+RP G +I+RD+   +  V+  LK+LHWE   TK
Sbjct: 531 CSEVDLLLEMDRILRPSGFIIIRDKQRVVDFVKKYLKALHWEEVGTK 577


>AT4G00740.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:307815-310298 REVERSE LENGTH=600
          Length = 600

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 6/68 (8%)

Query: 29  RCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEIT-YTKE-----QEGML 82
           RC L+ +M E+DRI+RP G +++RD P  + +V  +  ++ W  + + KE     +E +L
Sbjct: 527 RCSLVDLMVEMDRILRPEGKVVIRDSPEVLDKVARMAHAVRWSSSIHEKEPESHGREKIL 586

Query: 83  CAKRGTWR 90
            A +  W+
Sbjct: 587 IATKSLWK 594


>AT5G04060.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:1099271-1101810 FORWARD LENGTH=600
          Length = 600

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 12/92 (13%)

Query: 7   QPFSPI---LEKLHQNDL--HLLFWLLRCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEV 61
           +PFS      + LH + L  H   +   C L  +M E+DRIIRP G +I+RDE + +  V
Sbjct: 504 EPFSTYPRTYDLLHADHLFTHYKIYGEGCLLEDIMLEMDRIIRPQGFIIIRDEESIVSRV 563

Query: 62  EALLKSLHWEI-------TYTKEQEGMLCAKR 86
             L     WE+        Y K +  + C K+
Sbjct: 564 RDLAPKFLWEVEAHELQDKYKKTETVLFCRKK 595


>AT1G26850.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:9301146-9303432 REVERSE LENGTH=616
          Length = 616

 Score = 45.4 bits (106), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 16  LHQNDLHLLFWLLRCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYT 75
           +H N L  L+   +C    ++ E+DRI+RP G +I+RD+ +T+ +V+ ++  + W+    
Sbjct: 530 IHANHLFSLY-KNKCNADDILLEMDRILRPEGAVIIRDDVDTLIKVKRIIAGMRWDAKLV 588

Query: 76  KEQEGMLCAKR 86
             ++G L  ++
Sbjct: 589 DHEDGPLVPEK 599


>AT1G26850.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:9301146-9303432 REVERSE LENGTH=616
          Length = 616

 Score = 45.4 bits (106), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 16  LHQNDLHLLFWLLRCKLIPVMAEVDRIIRPGGTLIVRDEPNTIKEVEALLKSLHWEITYT 75
           +H N L  L+   +C    ++ E+DRI+RP G +I+RD+ +T+ +V+ ++  + W+    
Sbjct: 530 IHANHLFSLY-KNKCNADDILLEMDRILRPEGAVIIRDDVDTLIKVKRIIAGMRWDAKLV 588

Query: 76  KEQEGMLCAKR 86
             ++G L  ++
Sbjct: 589 DHEDGPLVPEK 599