Miyakogusa Predicted Gene
- Lj2g3v1728900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1728900.1 tr|G7KGA2|G7KGA2_MEDTR Short internode related
sequence OS=Medicago truncatula GN=MTR_5g021130 PE=4
,57.64,0,seg,NULL; DUF702,Protein of unknown function DUF702; FAMILY
NOT NAMED,NULL; put_zinc_LRP1: putative ,CUFF.37739.1
(321 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51060.1 | Symbols: STY1, SRS1 | Lateral root primordium (LRP... 201 6e-52
AT5G66350.1 | Symbols: SHI | Lateral root primordium (LRP) prote... 187 9e-48
AT1G19790.2 | Symbols: SRS7 | SHI-related sequence 7 | chr1:6838... 175 3e-44
AT1G19790.1 | Symbols: SRS7 | SHI-related sequence 7 | chr1:6838... 175 3e-44
AT1G75520.1 | Symbols: SRS5 | SHI-related sequence 5 | chr1:2835... 168 5e-42
AT2G21400.1 | Symbols: SRS3 | SHI-related sequence3 | chr2:91583... 134 1e-31
AT4G36260.1 | Symbols: STY2, SRS2 | Lateral root primordium (LRP... 132 5e-31
AT5G12330.4 | Symbols: LRP1 | Lateral root primordium (LRP) prot... 125 4e-29
AT5G12330.1 | Symbols: LRP1 | Lateral root primordium (LRP) prot... 124 9e-29
AT5G12330.2 | Symbols: LRP1 | Lateral root primordium (LRP) prot... 124 9e-29
AT2G18120.1 | Symbols: SRS4 | SHI-related sequence 4 | chr2:7876... 120 1e-27
AT3G54430.1 | Symbols: SRS6 | SHI-related sequence 6 | chr3:2014... 99 4e-21
AT5G33210.2 | Symbols: SRS8 | SHI-related sequence 8 | chr5:1246... 84 2e-16
AT5G33210.1 | Symbols: SRS8 | SHI-related sequence 8 | chr5:1246... 82 4e-16
AT5G12330.3 | Symbols: LRP1 | Lateral root primordium (LRP) prot... 81 9e-16
>AT3G51060.1 | Symbols: STY1, SRS1 | Lateral root primordium (LRP)
protein-related | chr3:18964606-18966130 FORWARD
LENGTH=370
Length = 370
Score = 201 bits (510), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 177/377 (46%), Gaps = 65/377 (17%)
Query: 1 MAGLFSLXXXXXXXNDAEDQQHHHQQNEIPPPPDS-SLFWYSNKNHDDVV---------- 49
MAG FSL + Q H+ N PPPP S + WY N N +
Sbjct: 1 MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60
Query: 50 --SSSYRGFEIWNXXXXXXXXXXXXXXXXXXXXDLYTSAAALGVGPSE------------ 95
+++ E+W DLY+SAA LGVGPS
Sbjct: 61 SSNAALGTLELWQNHNQQEIMFQHQQHQQRL--DLYSSAAGLGVGPSNHNQFDISGETST 118
Query: 96 -------AXXXXXXXXXXXXXXXXXCQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKST 148
A CQDCGNQAKKDC H+RCRTCCKSRGF+C TH++ST
Sbjct: 119 AGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRST 178
Query: 149 WVPASKXXXXXXXXXXXXXXXXXXXDHG----HNVHNP-TSSSLACTLLPPNPSHSGGLE 203
WVPA+K H + P TSSSL CT + PSHS GLE
Sbjct: 179 WVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRI---PSHS-GLE 234
Query: 204 EVNFPAVVSTPAEFKCVRVSSVDEADEEYAYSTAVNIGGHVFRGILYD--HGPDGNXXXX 261
NFPA VS+ A F+CVRVSSV++ +EE+AY TAV+IGGH+F+GILYD G G
Sbjct: 235 VGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYN 294
Query: 262 XXXXXXXXXXXXVVQPLNLISAAGNTTA--------VGAI----------VDPSSLYPAP 303
Q LNLI+A T A +G I +DP++LYP P
Sbjct: 295 VVAAGESSSGGGGAQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAALYPTP 354
Query: 304 LNAFMPASGTQFFPHPR 320
+N FM +GTQFFP+PR
Sbjct: 355 INTFM--AGTQFFPNPR 369
>AT5G66350.1 | Symbols: SHI | Lateral root primordium (LRP)
protein-related | chr5:26504714-26506143 REVERSE
LENGTH=331
Length = 331
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 161/349 (46%), Gaps = 48/349 (13%)
Query: 1 MAGLFSLXXXXXXXNDAEDQQHHHQQNEIPPPPDSSLFWYSNKNHD---DVVSSSYRG-F 56
MAG FSL H N S W N N + SY+G
Sbjct: 1 MAGFFSLGHGGGGNTP---DNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTL 57
Query: 57 EIWNXXXXXXXXXXXXXXXXXXXXDLYTSAAALGVGPSE------AXXXXXXXXXXXXXX 110
E+W DLYTSAA LGVGPS +
Sbjct: 58 ELWQHPNNQEIIFQQQQQQQQRL-DLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSG 116
Query: 111 XXXCQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXX 170
CQDCGNQ+KKDC H+RCRTCCKSRG DC TH+KSTWVPA+K
Sbjct: 117 GPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQ 176
Query: 171 XXXDHGHNVHN---PTSSSLACTLLPPNPSHSGGLEEVNFPAVVSTPAEFKCVRVSSVDE 227
S+S+A T +P N ++ GLE NFP VS+ A F+CVRVSSVD+
Sbjct: 177 LGGSVPKRQRERIPARSTSMAYTRIPSN--NTSGLEVGNFPPEVSSSAVFRCVRVSSVDD 234
Query: 228 ADEEYAYSTAVNIGGHVFRGILYDHGPDGNXXXXXXXXXXXXXXXXVVQPLNLISA---- 283
+EEYAY TAV+IGGHVF+G+LYD GP QPLNLI+A
Sbjct: 235 EEEEYAYKTAVSIGGHVFKGVLYDQGP-----------AERSSSGGGSQPLNLITAGPSA 283
Query: 284 -------AGNTTAVGAI----VDPSSL-YPAPLNAFMPASGTQFFPHPR 320
+ N VG+ +DP+SL YP P+N FM +GT FF + R
Sbjct: 284 SSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFM--TGTHFFSNSR 330
>AT1G19790.2 | Symbols: SRS7 | SHI-related sequence 7 |
chr1:6838400-6839831 REVERSE LENGTH=345
Length = 345
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 126/229 (55%), Gaps = 25/229 (10%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXXXXX 173
CQDCGNQAKKDCPH+RCRTCCKSRGFDCQTH+KSTWV A+K
Sbjct: 119 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDA 178
Query: 174 D-------------HGHNVHNPTSSSLACTLLPPNPSHSGGLEEVNFPAVVSTPAEFKCV 220
+ N S+LACT + + S GLE + P +S+PA F+C+
Sbjct: 179 NSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVN--ASSSGLETSHLPPEISSPAVFRCM 236
Query: 221 RVSSVDEADEEYAYSTAVNIGGHVFRGILYDHGPDGNXXXXXXXXXXXXXXXXVVQPLNL 280
RVSS+D+ DEEYAY TAV+IGGHVF+GILYD GP + + ++
Sbjct: 237 RVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHLNLMDS 296
Query: 281 ISAAGNTTAVGAI------VDPSSLYPA---PLNAFMPASGTQFFPHPR 320
+A T AV A+ +DPSSLY A P NAF+ A GT FF R
Sbjct: 297 TPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFNAFV-AGGTPFFASSR 344
>AT1G19790.1 | Symbols: SRS7 | SHI-related sequence 7 |
chr1:6838400-6839831 REVERSE LENGTH=345
Length = 345
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 126/229 (55%), Gaps = 25/229 (10%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXXXXX 173
CQDCGNQAKKDCPH+RCRTCCKSRGFDCQTH+KSTWV A+K
Sbjct: 119 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDA 178
Query: 174 D-------------HGHNVHNPTSSSLACTLLPPNPSHSGGLEEVNFPAVVSTPAEFKCV 220
+ N S+LACT + + S GLE + P +S+PA F+C+
Sbjct: 179 NSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVN--ASSSGLETSHLPPEISSPAVFRCM 236
Query: 221 RVSSVDEADEEYAYSTAVNIGGHVFRGILYDHGPDGNXXXXXXXXXXXXXXXXVVQPLNL 280
RVSS+D+ DEEYAY TAV+IGGHVF+GILYD GP + + ++
Sbjct: 237 RVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHLNLMDS 296
Query: 281 ISAAGNTTAVGAI------VDPSSLYPA---PLNAFMPASGTQFFPHPR 320
+A T AV A+ +DPSSLY A P NAF+ A GT FF R
Sbjct: 297 TPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFNAFV-AGGTPFFASSR 344
>AT1G75520.1 | Symbols: SRS5 | SHI-related sequence 5 |
chr1:28351779-28353179 REVERSE LENGTH=346
Length = 346
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 121/225 (53%), Gaps = 22/225 (9%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXX-----------XXXXX 162
CQDCGNQAKKDCPH+RCRTCCKSRGF CQTH+KSTWVPA+K
Sbjct: 125 CQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHSASSR 184
Query: 163 XXXXXXXXXXXDHGHNVHNPT-----SSSLACTLLPPNPSHSGGLEEVNFPAVVSTPAEF 217
G N + S+LA T + S+SG + P V++PA F
Sbjct: 185 ETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNSPAIF 244
Query: 218 KCVRVSSV--DEADEEYAYSTAVNIGGHVFRGILYDHGPDGNXXXXXXXXXXXXXXXXVV 275
+CVRVSS+ DE D+ YAY TAVNIGGH+F+GILYD GP+ V
Sbjct: 245 RCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTATTTNVE 304
Query: 276 QPLNLISAAGNTTAVGAIVDPSSLYPAPLNAFMPASGTQFFPHPR 320
+ N G ++DPSSLYPA LN+F+ +GT FF PR
Sbjct: 305 ETATKTVTGNNNN--GLMLDPSSLYPAQLNSFI--AGTPFFTPPR 345
>AT2G21400.1 | Symbols: SRS3 | SHI-related sequence3 |
chr2:9158390-9159541 FORWARD LENGTH=174
Length = 174
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 87/141 (61%), Gaps = 27/141 (19%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXXXXX 173
C+DCGNQAKKDC ++RCRTCCKS+ F CQTH+KSTWVPA +
Sbjct: 9 CEDCGNQAKKDCVYMRCRTCCKSKAFHCQTHIKSTWVPAYR------------------R 50
Query: 174 DHGHNVHNPTSSSL-ACTLLPPNPSHSGGLEEVNFPAVVSTPAEFKCVRVSSVDEADEEY 232
H + P S+S+ + P H FPA +S+ A+F+CV+VSS+D+ E+Y
Sbjct: 51 SHHKHQSQPLSTSIPKGVQIHTTPGH--------FPAELSSLADFRCVKVSSIDDGKEQY 102
Query: 233 AYSTAVNIGGHVFRGILYDHG 253
AY T VNIGGHVFRGIL+D G
Sbjct: 103 AYQTTVNIGGHVFRGILHDQG 123
>AT4G36260.1 | Symbols: STY2, SRS2 | Lateral root primordium (LRP)
protein-related | chr4:17155705-17157006 REVERSE
LENGTH=322
Length = 322
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 115/227 (50%), Gaps = 22/227 (9%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXXXXX 173
C+DCGNQAKKDC H+RCRTCCKSRGFDC TH++STW+P ++
Sbjct: 94 CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGS 153
Query: 174 DHGHNV----------HNPTSSSLACTLLPPNPSHSGGLEEVNFPAVVSTPAEFKCVRVS 223
G +PT + + P+ S + E +FP VS+ A F+CV++S
Sbjct: 154 GSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEVSSDALFRCVKMS 213
Query: 224 SVDE-ADEEYAYSTAVNIGGHVFRGILYDHGPD----GNXXXXXXXXXXXXXXXXVVQPL 278
VD+ D +YAY T VNIGGH+F+GILYD GP+ P
Sbjct: 214 GVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPESSYMSGGSGGSDHQSSSAGGGGGGHPF 273
Query: 279 N--LISAAGNTTAVGAIVDPSS--LYPAPL--NAFMPASGTQFFPHP 319
N +++ G + VDP+S Y + + + FMP GTQF+ +P
Sbjct: 274 NPPVVTDGGGGVSSAMFVDPNSGGYYSSNMTTSVFMPP-GTQFYQNP 319
>AT5G12330.4 | Symbols: LRP1 | Lateral root primordium (LRP)
protein-related | chr5:3987677-3989408 REVERSE
LENGTH=407
Length = 407
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 80/158 (50%), Gaps = 18/158 (11%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXXXXX 173
CQDCGNQAKK+C RCRTCCKSRGFDC TH+KSTWV A++
Sbjct: 199 CQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVMPTGANPTAGSSL 258
Query: 174 DHGHNVHNP------------TSSSLACTLLPP------NPSHSGGLEEVNFPAVVSTPA 215
P +S + + PP + GG +P V A
Sbjct: 259 STSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREAWPGQVRAAA 318
Query: 216 EFKCVRVSSVDEADEEYAYSTAVNIGGHVFRGILYDHG 253
FKCVRV++V++ D+EYAY V IGGHVF+G LYD G
Sbjct: 319 VFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQG 356
>AT5G12330.1 | Symbols: LRP1 | Lateral root primordium (LRP)
protein-related | chr5:3987677-3989074 REVERSE
LENGTH=320
Length = 320
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 80/158 (50%), Gaps = 18/158 (11%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXXXXX 173
CQDCGNQAKK+C RCRTCCKSRGFDC TH+KSTWV A++
Sbjct: 112 CQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVMPTGANPTAGSSL 171
Query: 174 DHGHNVHNP------------TSSSLACTLLPP------NPSHSGGLEEVNFPAVVSTPA 215
P +S + + PP + GG +P V A
Sbjct: 172 STSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREAWPGQVRAAA 231
Query: 216 EFKCVRVSSVDEADEEYAYSTAVNIGGHVFRGILYDHG 253
FKCVRV++V++ D+EYAY V IGGHVF+G LYD G
Sbjct: 232 VFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQG 269
>AT5G12330.2 | Symbols: LRP1 | Lateral root primordium (LRP)
protein-related | chr5:3987677-3989074 REVERSE
LENGTH=320
Length = 320
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 80/158 (50%), Gaps = 18/158 (11%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXXXXX 173
CQDCGNQAKK+C RCRTCCKSRGFDC TH+KSTWV A++
Sbjct: 112 CQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVMPTGANPTAGSSL 171
Query: 174 DHGHNVHNP------------TSSSLACTLLPP------NPSHSGGLEEVNFPAVVSTPA 215
P +S + + PP + GG +P V A
Sbjct: 172 STSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREAWPGQVRAAA 231
Query: 216 EFKCVRVSSVDEADEEYAYSTAVNIGGHVFRGILYDHG 253
FKCVRV++V++ D+EYAY V IGGHVF+G LYD G
Sbjct: 232 VFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQG 269
>AT2G18120.1 | Symbols: SRS4 | SHI-related sequence 4 |
chr2:7876722-7877681 REVERSE LENGTH=222
Length = 222
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXXXXX 173
CQ+CGNQAKK C H RCRTCCKS G C TH++STW+P +K
Sbjct: 72 CQECGNQAKKGCTHGRCRTCCKSNGLHCPTHVRSTWIPIAKRRERQQQLQTP-------- 123
Query: 174 DHGHNVHNPTSSSLACTLLPPNPSH----SGGLE--EVNFPAVVSTPAEFKCVRVSSVDE 227
NPT S H S GLE E FP VS+ A F+CVR+S D+
Sbjct: 124 -----TSNPTGGSGRVGKYRDINQHATLDSSGLEMGETRFPDEVSSDALFRCVRMSGTDD 178
Query: 228 ADEEYAYSTAVNIGGHVFRGILYDHGPD 255
+ +YAY T V I GH+F+GILY+ GP+
Sbjct: 179 GEGQYAYQTTVGIAGHLFKGILYNQGPE 206
>AT3G54430.1 | Symbols: SRS6 | SHI-related sequence 6 |
chr3:20147224-20147851 REVERSE LENGTH=183
Length = 183
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXXXXX 173
C+DCGN+AKK+C RCRTCCKSRG++C TH+KSTW+P+S
Sbjct: 41 CRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSS-----------ATRSSSSPS 89
Query: 174 DHGHNVHNPTSSSLACTLLPPNPSHSGGLEEVNFPAVVSTPAEFKCVRVSSVDEADE-EY 232
+ + SS +LLP S P + PA FK RV+++ ++ E
Sbjct: 90 ERKKKLKIDKQSSPNVSLLPTTTSRQERGFREGLPGKIEAPAVFKRTRVTAISNNEQAEI 149
Query: 233 AYSTAVNIGGHVFRGILYDHGPDGN 257
Y V I GH+F+G L+ +G D N
Sbjct: 150 GYQATVTISGHIFKGFLHYYGVDHN 174
>AT5G33210.2 | Symbols: SRS8 | SHI-related sequence 8 |
chr5:12464858-12465473 REVERSE LENGTH=106
Length = 106
Score = 83.6 bits (205), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXXXXXXXXX 173
CQD GNQAKKDC H+RCRTCCKSRGF+C TH++STWVPA+K
Sbjct: 17 CQDFGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPATKRRERQQQLATVQPQTQLPR 76
Query: 174 DHG----HNVHNP-TSSSLACTLLPPNPSHSG 200
H + P TSSSL CT + P HSG
Sbjct: 77 GESVPKRHRENLPATSSSLVCTRI---PFHSG 105
>AT5G33210.1 | Symbols: SRS8 | SHI-related sequence 8 |
chr5:12465057-12465713 REVERSE LENGTH=173
Length = 173
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASKXXXXXXXXXXXX------X 167
CQD GNQAKKDC H+RCRTCCKSRGF+C TH++STWVPA+K
Sbjct: 52 CQDFGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPATKRRERQQQLATVQPQTQLPR 111
Query: 168 XXXXXXDHGHNVHNPTSSSLACTLLPPNPSHSG 200
H N+ TSSSL CT + P HSG
Sbjct: 112 GESVPKRHRENL-PATSSSLVCTRI---PFHSG 140
>AT5G12330.3 | Symbols: LRP1 | Lateral root primordium (LRP)
protein-related | chr5:3988394-3989074 REVERSE
LENGTH=226
Length = 226
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 114 CQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHLKSTWVPASK 154
CQDCGNQAKK+C RCRTCCKSRGFDC TH+KSTWV A++
Sbjct: 112 CQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAAR 152