Miyakogusa Predicted Gene

Lj2g3v1728810.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1728810.2 CUFF.37764.2
         (180 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24290.2 | Symbols:  | MAC/Perforin domain-containing protein...   169   9e-43
AT1G28380.1 | Symbols: NSL1 | MAC/Perforin domain-containing pro...   108   2e-24
AT1G29690.1 | Symbols: CAD1 | MAC/Perforin domain-containing pro...    91   3e-19
AT1G14780.1 | Symbols:  | MAC/Perforin domain-containing protein...    87   5e-18

>AT4G24290.2 | Symbols:  | MAC/Perforin domain-containing protein |
           chr4:12594856-12597815 FORWARD LENGTH=606
          Length = 606

 Score =  169 bits (428), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 87/177 (49%), Positives = 111/177 (62%), Gaps = 6/177 (3%)

Query: 5   LSDNANAYLSCDSHSCTSHKKVKWNCFSHVCTAPVESDDSVSIVTGAQLQVEN----NCL 60
           L D+ N  +  +SH    ++KV W  +SHVCT PVESDD +S+VTGAQL VE+    N L
Sbjct: 415 LEDDLNRSIRQESHDRRYYEKVNWKNYSHVCTEPVESDDDLSVVTGAQLHVESHGFKNVL 474

Query: 61  LLRLRFSKVIGGTLQRLPEWDQSSNLGQLRNIIFASSVHE--KEKKYTPKGGEVTIGSAA 118
            LRL FS+V+G TL +  EWD++        +I     H     +K  P+  +V I SA 
Sbjct: 475 FLRLCFSRVVGATLVKNSEWDEAVGFAPKSGLISTLISHHFTAAQKPPPRPADVNINSAI 534

Query: 119 YPTGPPSRVQTPSLLRFVDTAEIIRGPEHTPGYWVVSGARFSVQNGKIYLSVKYSLL 175
           YP GPP   Q P LL+FVDT+E+ RGP+ +PGYWVVSGAR  V+ GKI L VKYSL 
Sbjct: 535 YPGGPPVPTQAPKLLKFVDTSEMTRGPQESPGYWVVSGARLLVEKGKISLKVKYSLF 591


>AT1G28380.1 | Symbols: NSL1 | MAC/Perforin domain-containing
           protein | chr1:9963696-9966060 FORWARD LENGTH=612
          Length = 612

 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 88/169 (52%), Gaps = 16/169 (9%)

Query: 26  VKWNCFSHVCTAPVE-----SDDSVSIVTGAQLQVEN----NCLLLRLRFSKVIGGTLQR 76
           VKW  FSHVCT PV+     SDD+ SIVT A L+V+       L LRL FS +    + R
Sbjct: 442 VKWGIFSHVCTYPVQYNGARSDDTASIVTKAWLEVKGMGMRKVLFLRLGFS-LDASAVTR 500

Query: 77  LPEWDQSSNLGQLRNIIFASSVH-----EKEKKYTPKGGEVTIGSAAYPTGPPSRVQTPS 131
              WD  S   +   +    S             T    ++ I SA YP GP   V+ P 
Sbjct: 501 KSCWDNLSTNSRKSGVFSMISTRLSTGLSPNPATTKPQSKIDINSAVYPRGPSPPVK-PK 559

Query: 132 LLRFVDTAEIIRGPEHTPGYWVVSGARFSVQNGKIYLSVKYSLLNFVVQ 180
           LL  VDT E++RGPE  PGYWVV+GA+  V+ GKI +  KYSLL  + +
Sbjct: 560 LLSLVDTKEVMRGPEEQPGYWVVTGAKLCVEAGKISIKAKYSLLTVISE 608


>AT1G29690.1 | Symbols: CAD1 | MAC/Perforin domain-containing
           protein | chr1:10379310-10381861 REVERSE LENGTH=561
          Length = 561

 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 90/163 (55%), Gaps = 32/163 (19%)

Query: 26  VKWNCFSHVCTAPVESDDS-------VSIVTGAQLQV----ENNCLLLRLRFSKVIGGTL 74
           +KW  FSHV T+P+E  ++       V IVTGAQL V      N L L+L FSKV G T+
Sbjct: 420 IKWKNFSHVSTSPIEHTETHIGDLSGVHIVTGAQLGVWDFGSKNVLHLKLLFSKVPGCTI 479

Query: 75  QRLPEWDQSSNLGQLRNIIFASSVHEKEKKYTPKGGEVTIGSAAYPTGPPSRVQTPSLLR 134
           +R   WD +           ASS      +  P GG  T  S    +G     Q+  L +
Sbjct: 480 RR-SVWDHTP---------VASS-----GRLEP-GGPSTSSSTEEVSG-----QSGKLAK 518

Query: 135 FVDTAEIIRGPEHTPGYWVVSGARFSVQNGKIYLSVKYSLLNF 177
            VD++E+++GP+  PG+W+V+GA+  V+ GKI L VKYSLLN+
Sbjct: 519 IVDSSEMLKGPQDLPGHWLVTGAKLGVEKGKIVLRVKYSLLNY 561


>AT1G14780.1 | Symbols:  | MAC/Perforin domain-containing protein |
           chr1:5091020-5093873 FORWARD LENGTH=627
          Length = 627

 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 38/176 (21%)

Query: 31  FSHVCTAPVESD--------------DSVSIVTGAQLQVENN----CLLLRLRFSKVIGG 72
           FSHVCT PV+ D              D   IVTGAQL+V+ +     L LRLR++KV   
Sbjct: 452 FSHVCTVPVKYDPNWIKTTSNHKSQNDVAFIVTGAQLEVKKHGSKSVLHLRLRYTKVSDH 511

Query: 73  TLQRLPEWDQSSNLGQLRNIIFAS--------SVH----EKEKKYTPKGGEVTIGSAAYP 120
            + +   W         ++ IF+S        SVH    +K+K       EV + S  +P
Sbjct: 512 YVVQ-NSWVHGPIGTSQKSGIFSSMSMPLTSGSVHHNMIQKDKN------EVVLDSGVFP 564

Query: 121 TGPPSRVQTPSLLRFVDTAEIIRGPEHTPGYWVVSGARFSVQNGKIYLSVKYSLLN 176
            GPP       +++FVD +++ RGP+H+PG+W+V+G R  +  GK+ L VK++LL+
Sbjct: 565 GGPPVPANN-KIVKFVDLSQLCRGPQHSPGHWLVTGVRLYLDKGKLCLHVKFALLH 619