Miyakogusa Predicted Gene
- Lj2g3v1707550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1707550.1 Non Chatacterized Hit- tr|I3S268|I3S268_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.39,0,ATP-synt_C,ATPase, F0/V0 complex, subunit C; V-TYPE
PROTON ATPASE PROTEOLIPID SUBUNIT,NULL; seg,NULL,CUFF.37702.1
(164 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75630.1 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kD... 220 3e-58
AT4G34720.1 | Symbols: AVA-P1, VHA-C1, ATVHA-C1 | ATPase, F0/V0 ... 219 5e-58
AT4G38920.1 | Symbols: AVA-P3, ATVHA-C3, VHA-C3 | vacuolar-type ... 219 5e-58
AT2G16510.1 | Symbols: | ATPase, F0/V0 complex, subunit C prote... 219 5e-58
AT1G19910.1 | Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | ATPase, F0/V0... 218 1e-57
AT1G75630.2 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kD... 203 4e-53
AT4G32530.1 | Symbols: | ATPase, F0/V0 complex, subunit C prote... 55 2e-08
AT2G25610.1 | Symbols: | ATPase, F0/V0 complex, subunit C prote... 55 2e-08
>AT1G75630.1 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kDa
proteolipid subunit 4 | chr1:28400662-28402032 FORWARD
LENGTH=166
Length = 166
Score = 220 bits (561), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/163 (73%), Positives = 121/163 (74%)
Query: 2 AGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61
+GFSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 4 SGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 63
Query: 62 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 121
GVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVR
Sbjct: 64 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 123
Query: 122 ANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
ANAQQPKLFVGM YGLIVGIILSSRAGQSRAE
Sbjct: 124 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166
>AT4G34720.1 | Symbols: AVA-P1, VHA-C1, ATVHA-C1 | ATPase, F0/V0
complex, subunit C protein | chr4:16568223-16569165
REVERSE LENGTH=164
Length = 164
Score = 219 bits (559), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 121/164 (73%)
Query: 1 MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
M+ FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1 MSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
Query: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGV
Sbjct: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120
Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
RANAQQPKLFVGM YGLIVGIILSSRAGQSRAE
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
>AT4G38920.1 | Symbols: AVA-P3, ATVHA-C3, VHA-C3 | vacuolar-type
H(+)-ATPase C3 | chr4:18147330-18148853 FORWARD
LENGTH=164
Length = 164
Score = 219 bits (559), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 121/164 (73%)
Query: 1 MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
M+ FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1 MSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
Query: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGV
Sbjct: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120
Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
RANAQQPKLFVGM YGLIVGIILSSRAGQSRAE
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
>AT2G16510.1 | Symbols: | ATPase, F0/V0 complex, subunit C protein
| chr2:7160007-7160811 REVERSE LENGTH=164
Length = 164
Score = 219 bits (559), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 121/164 (73%)
Query: 1 MAGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
M+ FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1 MSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
Query: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGV
Sbjct: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120
Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
RANAQQPKLFVGM YGLIVGIILSSRAGQSRAE
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
>AT1G19910.1 | Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | ATPase, F0/V0
complex, subunit C protein | chr1:6913317-6914322
FORWARD LENGTH=165
Length = 165
Score = 218 bits (555), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/161 (73%), Positives = 119/161 (73%)
Query: 4 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 63
FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV
Sbjct: 5 FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 64
Query: 64 LGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRAN 123
LGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVRAN
Sbjct: 65 LGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRAN 124
Query: 124 AQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
AQQPKLFVGM YGLIVGIILSSRAGQSRAE
Sbjct: 125 AQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
>AT1G75630.2 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kDa
proteolipid subunit 4 | chr1:28400662-28402032 FORWARD
LENGTH=200
Length = 200
Score = 203 bits (516), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/197 (60%), Positives = 121/197 (61%), Gaps = 34/197 (17%)
Query: 2 AGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61
+GFSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 4 SGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 63
Query: 62 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 121
GVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVR
Sbjct: 64 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 123
Query: 122 ----------------------------------ANAQQPKLFVGMXXXXXXXXXXXXYG 147
ANAQQPKLFVGM YG
Sbjct: 124 VVDCNPDSKIKIYSFTTSFLSNLSQKELFIDLLSANAQQPKLFVGMILILIFAEALALYG 183
Query: 148 LIVGIILSSRAGQSRAE 164
LIVGIILSSRAGQSRAE
Sbjct: 184 LIVGIILSSRAGQSRAE 200
>AT4G32530.1 | Symbols: | ATPase, F0/V0 complex, subunit C protein
| chr4:15693399-15694958 REVERSE LENGTH=180
Length = 180
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 25 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGIN--PK 82
S +GAA+G +G + + P + K+++ V+ + IYG+I+A+I+ T + P
Sbjct: 37 SVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPS 96
Query: 83 AKSY---YLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXX 139
+K Y L GY + +GI+G + ++AQ LFV +
Sbjct: 97 SKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIF 156
Query: 140 XXXXXXYGLIVGIILSSRA 158
+G+IVGII+S++A
Sbjct: 157 GSALGLFGVIVGIIMSAQA 175
>AT2G25610.1 | Symbols: | ATPase, F0/V0 complex, subunit C protein
| chr2:10901585-10902494 REVERSE LENGTH=178
Length = 178
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 25 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGIN--PK 82
S +GAA+G +G + + P + K+++ V+ + IYG+I+A+I+ T + P
Sbjct: 35 SVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPS 94
Query: 83 AKSY---YLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXX 139
+K Y L GY + +GI+G + ++AQ LFV +
Sbjct: 95 SKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIF 154
Query: 140 XXXXXXYGLIVGIILSSRA 158
+G+IVGII+S++A
Sbjct: 155 GSALGLFGVIVGIIMSAQA 173