Miyakogusa Predicted Gene

Lj2g3v1705450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1705450.1 Non Chatacterized Hit- tr|Q8GZ09|Q8GZ09_ARATH
Putative uncharacterized protein OS=Arabidopsis thalia,59.26,2e-18,
,CUFF.37692.1
         (210 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66290.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   258   1e-69

>AT5G66290.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: N-terminal
           protein myristoylation; LOCATED IN: cellular_component
           unknown; EXPRESSED IN: 14 plant structures; EXPRESSED
           DURING: 7 growth stages; Has 1807 Blast hits to 1807
           proteins in 277 species: Archae - 0; Bacteria - 0;
           Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
           Other Eukaryotes - 339 (source: NCBI BLink). |
           chr5:26477917-26479441 REVERSE LENGTH=202
          Length = 202

 Score =  258 bits (660), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 132/208 (63%), Positives = 163/208 (78%), Gaps = 7/208 (3%)

Query: 1   MGASESTF-SSAQTAGDKITTVSERLEVSDPILERLKSLKITPPILTSPPQTEGSLTDIL 59
           MGAS+ST   S +  GD ITT+S R E+ DPILE LK+L ++ PIL SPP TE SLTDIL
Sbjct: 1   MGASDSTLLGSQENRGDVITTISHRSEIVDPILENLKALTVSRPILKSPP-TESSLTDIL 59

Query: 60  VRKPSSSSASATVNPKVLLELFSMYRDFQGEKVHEISKRQEEIENRIEVADALAIKLLQR 119
           VRK  SSS+S TV+P++L+ELFS+YR++Q  K  EI+KRQE+IEN+IEVADALA KLLQR
Sbjct: 60  VRKALSSSSSNTVDPQILVELFSIYREWQENKAQEITKRQEDIENKIEVADALATKLLQR 119

Query: 120 FNHSMSTMKTASQHLSGVHSLQVEIGELKGRLTEVISNCDALCKRIEAEGPESLRSSIKP 179
           FNHS+S M+T +QHLS VH LQVE+GELKGRLTEVISNCD LCKRI +EGPESLRS++ P
Sbjct: 120 FNHSVSAMRTTAQHLSQVHGLQVELGELKGRLTEVISNCDTLCKRINSEGPESLRSTVAP 179

Query: 180 FAIATAADQEKCSSSLNSQTVSETHPPA 207
           F++A+       S S+N+ T   + P A
Sbjct: 180 FSLASPD-----SVSINTTTTLSSKPEA 202