Miyakogusa Predicted Gene
- Lj2g3v1705390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1705390.1 tr|A9U0R6|A9U0R6_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,37.04,2e-18,coiled-coil,NULL; FAMILY NOT NAMED,NULL;
DUF869,Protein of unknown function DUF869, plant;
seg,NULL,CUFF.37686.1
(281 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G36120.1 | Symbols: | Plant protein of unknown function (DUF... 212 3e-55
AT1G19835.2 | Symbols: | Plant protein of unknown function (DUF... 171 7e-43
AT1G19835.1 | Symbols: | Plant protein of unknown function (DUF... 171 7e-43
AT1G47900.2 | Symbols: | Plant protein of unknown function (DUF... 159 2e-39
AT1G47900.1 | Symbols: | Plant protein of unknown function (DUF... 159 2e-39
AT2G23360.1 | Symbols: | Plant protein of unknown function (DUF... 102 3e-22
AT3G05270.2 | Symbols: | Plant protein of unknown function (DUF... 66 3e-11
AT3G05270.1 | Symbols: | Plant protein of unknown function (DUF... 66 3e-11
AT3G19370.3 | Symbols: | Plant protein of unknown function (DUF... 65 4e-11
AT3G19370.2 | Symbols: | Plant protein of unknown function (DUF... 65 4e-11
AT3G19370.1 | Symbols: | Plant protein of unknown function (DUF... 65 4e-11
AT1G77580.2 | Symbols: | Plant protein of unknown function (DUF... 60 1e-09
AT1G77580.1 | Symbols: | Plant protein of unknown function (DUF... 59 2e-09
AT2G24470.1 | Symbols: | Plant protein of unknown function (DUF... 51 8e-07
>AT4G36120.1 | Symbols: | Plant protein of unknown function
(DUF869) | chr4:17093213-17096573 REVERSE LENGTH=996
Length = 996
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 162/271 (59%), Gaps = 21/271 (7%)
Query: 2 ECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSL 61
ECTRQIRIVKEES++KLQ+V+L K+ QW+KIK EL+ +I++L +GL A +NAAL RSL
Sbjct: 147 ECTRQIRIVKEESDKKLQDVILAKTSQWDKIKAELEGKIDELSEGLHRAASDNAALTRSL 206
Query: 62 QDSXXXXXXXXXXXXXXXXXXXXXXXXVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIM 121
Q+ +Q EKE++ LKY+LHV SKE++IRNEEK++ +
Sbjct: 207 QERSEMIVRISEERSKAEADVEKLKTNLQLAEKEISYLKYDLHVASKEVEIRNEEKNMSL 266
Query: 122 RSADVANKQQLEDVKNIAKLEGECQRLRVLLRKKLPGPAALAQMKLEIESSHHVISGPHL 181
+SAD+ANKQ LE VK IAKLE EC RLR LLRKKLPGPAA+AQMKLE+E H + P
Sbjct: 267 KSADIANKQHLEGVKKIAKLEAECHRLRGLLRKKLPGPAAMAQMKLEVEGLGHEFTDPRA 326
Query: 182 RKTGSL---------------------RESKFXXXXXXXXXXXXXXXXXXXASSNAELQA 220
++ S RE+ + ++ N ELQ
Sbjct: 327 QRNMSQNHNAHIAKAEISTDHKLEECKRENVYLTRRTLEMEEEIQTLKEHLSARNNELQV 386
Query: 221 SRNLYAKTVGILKSLEAEMQVLHQERSAQKS 251
SRN+ AKT+G LK LE +M + + +++A KS
Sbjct: 387 SRNVCAKTLGKLKILEGQMHMFNNDKNAPKS 417
>AT1G19835.2 | Symbols: | Plant protein of unknown function
(DUF869) | chr1:6856212-6859513 REVERSE LENGTH=982
Length = 982
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 144/267 (53%), Gaps = 29/267 (10%)
Query: 2 ECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSL 61
EC RQIR +KEE+EQKL +V+ K+ Q + ++ E +++I + ++ L EN AL RSL
Sbjct: 137 ECMRQIRSLKEENEQKLHDVIATKTNQMDNLRAEFESRIGEYEEELLRCGAENDALSRSL 196
Query: 62 QDSXXXXXXXXXXXXXXXXXXXXXXXXVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIM 121
Q+ ++S E+E+ +LKYE HV++KEL+IRNEEK++ M
Sbjct: 197 QERSNMLMRISEEKSQAESEIEHLKNNIESCEREINTLKYETHVITKELEIRNEEKNMSM 256
Query: 122 RSADVANKQQLEDVKNIAKLEGECQRLRVLLRKKLPGPAALAQMKLEIES--------SH 173
RSA+ ANKQ LE VK IAKLE ECQRLR L+RKKLPGPAALAQMK+E+ES H
Sbjct: 257 RSAEAANKQHLEGVKKIAKLEAECQRLRTLVRKKLPGPAALAQMKMEVESLGFGDHRQDH 316
Query: 174 HVISGP------------HLRKTGSL---------RESKFXXXXXXXXXXXXXXXXXXXA 212
P H+ + +E+ A
Sbjct: 317 RQRRSPVRPSSPLMSPMSHMSQVSEFSLDNMQKFHKENDLLTERLLAMEEETKMLKEALA 376
Query: 213 SSNAELQASRNLYAKTVGILKSLEAEM 239
N+ELQ SRNL AKT L++LEA+M
Sbjct: 377 KRNSELQVSRNLCAKTANRLQTLEAQM 403
>AT1G19835.1 | Symbols: | Plant protein of unknown function
(DUF869) | chr1:6856212-6859513 REVERSE LENGTH=982
Length = 982
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 144/267 (53%), Gaps = 29/267 (10%)
Query: 2 ECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSL 61
EC RQIR +KEE+EQKL +V+ K+ Q + ++ E +++I + ++ L EN AL RSL
Sbjct: 137 ECMRQIRSLKEENEQKLHDVIATKTNQMDNLRAEFESRIGEYEEELLRCGAENDALSRSL 196
Query: 62 QDSXXXXXXXXXXXXXXXXXXXXXXXXVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIM 121
Q+ ++S E+E+ +LKYE HV++KEL+IRNEEK++ M
Sbjct: 197 QERSNMLMRISEEKSQAESEIEHLKNNIESCEREINTLKYETHVITKELEIRNEEKNMSM 256
Query: 122 RSADVANKQQLEDVKNIAKLEGECQRLRVLLRKKLPGPAALAQMKLEIES--------SH 173
RSA+ ANKQ LE VK IAKLE ECQRLR L+RKKLPGPAALAQMK+E+ES H
Sbjct: 257 RSAEAANKQHLEGVKKIAKLEAECQRLRTLVRKKLPGPAALAQMKMEVESLGFGDHRQDH 316
Query: 174 HVISGP------------HLRKTGSL---------RESKFXXXXXXXXXXXXXXXXXXXA 212
P H+ + +E+ A
Sbjct: 317 RQRRSPVRPSSPLMSPMSHMSQVSEFSLDNMQKFHKENDLLTERLLAMEEETKMLKEALA 376
Query: 213 SSNAELQASRNLYAKTVGILKSLEAEM 239
N+ELQ SRNL AKT L++LEA+M
Sbjct: 377 KRNSELQVSRNLCAKTANRLQTLEAQM 403
>AT1G47900.2 | Symbols: | Plant protein of unknown function
(DUF869) | chr1:17647340-17651035 REVERSE LENGTH=1052
Length = 1052
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 154/279 (55%), Gaps = 31/279 (11%)
Query: 2 ECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSL 61
EC RQIR +K++ E KL +V L K++Q EK+ +E + ++ ++ L A ++ AL R+L
Sbjct: 187 ECMRQIRNLKKDHEVKLHDVALSKTKQIEKMTMEFEKRMCDYEQELLRSAADSDALSRTL 246
Query: 62 QDSXXXXXXXXXXXXXXXXXXXXXXXXVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIM 121
Q+ ++ E+E+ SLKYE+HV+SKEL+IRNEEK++ +
Sbjct: 247 QERSNMLVKVSEEKSRADAEIETLKSNLEMCEREIKSLKYEVHVVSKELEIRNEEKNMCI 306
Query: 122 RSADVANKQQLEDVKNIAKLEGECQRLRVLLRKKLPGPAALAQMKLEIES---------- 171
RSA+ ANKQ LE VK IAKLE ECQRLR L+RKKLPGPAALAQMKLE+E+
Sbjct: 307 RSAESANKQHLEGVKKIAKLEAECQRLRSLVRKKLPGPAALAQMKLEVENLGRDSGDARQ 366
Query: 172 --SHHVISGP-----HLRKTGS----------LRESKFXXXXXXXXXXXXXXXXXXXASS 214
S +S P TGS +E++F A
Sbjct: 367 KRSPVKVSSPCKSPGGYSSTGSEFSLDNAQKFQKENEFLTERLLAMEEETKMLKEALAKR 426
Query: 215 NAELQASRNLYAKTVGILKSLEAEMQVLHQERSAQKSVL 253
N+EL SRNL A++ L+SLEA++ Q+ ++QKS L
Sbjct: 427 NSELLESRNLCAQSTSKLQSLEAQL----QQNNSQKSSL 461
>AT1G47900.1 | Symbols: | Plant protein of unknown function
(DUF869) | chr1:17647340-17651035 REVERSE LENGTH=1054
Length = 1054
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 154/279 (55%), Gaps = 31/279 (11%)
Query: 2 ECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSL 61
EC RQIR +K++ E KL +V L K++Q EK+ +E + ++ ++ L A ++ AL R+L
Sbjct: 187 ECMRQIRNLKKDHEVKLHDVALSKTKQIEKMTMEFEKRMCDYEQELLRSAADSDALSRTL 246
Query: 62 QDSXXXXXXXXXXXXXXXXXXXXXXXXVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIM 121
Q+ ++ E+E+ SLKYE+HV+SKEL+IRNEEK++ +
Sbjct: 247 QERSNMLVKVSEEKSRADAEIETLKSNLEMCEREIKSLKYEVHVVSKELEIRNEEKNMCI 306
Query: 122 RSADVANKQQLEDVKNIAKLEGECQRLRVLLRKKLPGPAALAQMKLEIES---------- 171
RSA+ ANKQ LE VK IAKLE ECQRLR L+RKKLPGPAALAQMKLE+E+
Sbjct: 307 RSAESANKQHLEGVKKIAKLEAECQRLRSLVRKKLPGPAALAQMKLEVENLGRDSGDARQ 366
Query: 172 --SHHVISGP-----HLRKTGS----------LRESKFXXXXXXXXXXXXXXXXXXXASS 214
S +S P TGS +E++F A
Sbjct: 367 KRSPVKVSSPCKSPGGYSSTGSEFSLDNAQKFQKENEFLTERLLAMEEETKMLKEALAKR 426
Query: 215 NAELQASRNLYAKTVGILKSLEAEMQVLHQERSAQKSVL 253
N+EL SRNL A++ L+SLEA++ Q+ ++QKS L
Sbjct: 427 NSELLESRNLCAQSTSKLQSLEAQL----QQNNSQKSSL 461
>AT2G23360.1 | Symbols: | Plant protein of unknown function
(DUF869) | chr2:9949420-9952727 FORWARD LENGTH=898
Length = 898
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 128/243 (52%), Gaps = 7/243 (2%)
Query: 2 ECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSL 61
EC +Q+R V+EE E+++ + + SQ++E+ + ++ ++ K L E ENA L ++L
Sbjct: 100 ECVQQLRFVREEQERRMHDALTKASQEYERRLIVIKTELAGSGKRLAEAEGENAQLSKAL 159
Query: 62 QDSXXXXXXXXXXXXXXXXXXXXXXXXVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIM 121
++S EKE SL+YE+ V+ KEL++RNEE+
Sbjct: 160 LAKNKTVEDLNRERDRIEVDFNSLVSSLESKEKENVSLRYEVRVLEKELELRNEEREFSR 219
Query: 122 RSADVANKQQLEDVKNIAKLEGECQRLRVLLRKKLPGPAALAQMKLEIE--SSHHVISGP 179
R+A+ ++K LE+VK +AKLE ECQRLRVL+RK+LPGPAAL++M E+E V P
Sbjct: 220 RTAEASHKLHLENVKKVAKLESECQRLRVLVRKRLPGPAALSKMSNEVEMLGRRRVNGSP 279
Query: 180 HLRKTGSLRESKFXXXXXXXXXXXXXXXXXXXASSN--AELQASRNLYAKTVGILKSLEA 237
H + + K A + +ELQ SRN+Y++T L E+
Sbjct: 280 H---SPMIDSEKINNLTEQLCLLEEENKTLREALNKKVSELQFSRNMYSRTASRLLEFES 336
Query: 238 EMQ 240
++
Sbjct: 337 HLE 339
>AT3G05270.2 | Symbols: | Plant protein of unknown function
(DUF869) | chr3:1500803-1502926 REVERSE LENGTH=615
Length = 615
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 27/153 (17%)
Query: 2 ECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSL 61
EC RQ+ +EE QK++E + K ++WE K +L+A+I +L ++
Sbjct: 131 ECVRQLWQGREEQNQKIEEAINNKCKEWETTKSQLEARIEEL---------------QAR 175
Query: 62 QDSXXXXXXXXXXXXXXXXXXXXXXXXVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIM 121
QD +++ EKE ++LK +L S+E+ IR E+ +
Sbjct: 176 QD------------VTTSSVHEDLYPKLEALEKENSALKLQLLSKSEEVKIRTIERDLST 223
Query: 122 RSADVANKQQLEDVKNIAKLEGECQRLRVLLRK 154
++A+ A+KQQLE +K + KLE EC++LRV++R+
Sbjct: 224 QAAESASKQQLEGIKKLTKLEAECRKLRVMVRR 256
>AT3G05270.1 | Symbols: | Plant protein of unknown function
(DUF869) | chr3:1500803-1502926 REVERSE LENGTH=615
Length = 615
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 27/153 (17%)
Query: 2 ECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSL 61
EC RQ+ +EE QK++E + K ++WE K +L+A+I +L ++
Sbjct: 131 ECVRQLWQGREEQNQKIEEAINNKCKEWETTKSQLEARIEEL---------------QAR 175
Query: 62 QDSXXXXXXXXXXXXXXXXXXXXXXXXVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIM 121
QD +++ EKE ++LK +L S+E+ IR E+ +
Sbjct: 176 QD------------VTTSSVHEDLYPKLEALEKENSALKLQLLSKSEEVKIRTIERDLST 223
Query: 122 RSADVANKQQLEDVKNIAKLEGECQRLRVLLRK 154
++A+ A+KQQLE +K + KLE EC++LRV++R+
Sbjct: 224 QAAESASKQQLEGIKKLTKLEAECRKLRVMVRR 256
>AT3G19370.3 | Symbols: | Plant protein of unknown function
(DUF869) | chr3:6711046-6713494 FORWARD LENGTH=704
Length = 704
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 89 VQSYEKEVTSLKYELHVMSKELDIRNEEKSIIMRSADVANKQQLEDVKNIAKLEGECQRL 148
+ S EKE L+YE V+ K+L ++ EE RS ++ +KQQL +V I +LE ECQRL
Sbjct: 194 LDSTEKENAFLRYEYTVLEKDLQVKTEETEHTRRSMELTHKQQLRNVNKIVELEAECQRL 253
Query: 149 RVLLRKKLP 157
R+L RKK P
Sbjct: 254 RLLFRKKFP 262
>AT3G19370.2 | Symbols: | Plant protein of unknown function
(DUF869) | chr3:6711046-6713494 FORWARD LENGTH=704
Length = 704
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 89 VQSYEKEVTSLKYELHVMSKELDIRNEEKSIIMRSADVANKQQLEDVKNIAKLEGECQRL 148
+ S EKE L+YE V+ K+L ++ EE RS ++ +KQQL +V I +LE ECQRL
Sbjct: 194 LDSTEKENAFLRYEYTVLEKDLQVKTEETEHTRRSMELTHKQQLRNVNKIVELEAECQRL 253
Query: 149 RVLLRKKLP 157
R+L RKK P
Sbjct: 254 RLLFRKKFP 262
>AT3G19370.1 | Symbols: | Plant protein of unknown function
(DUF869) | chr3:6711046-6713494 FORWARD LENGTH=704
Length = 704
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 89 VQSYEKEVTSLKYELHVMSKELDIRNEEKSIIMRSADVANKQQLEDVKNIAKLEGECQRL 148
+ S EKE L+YE V+ K+L ++ EE RS ++ +KQQL +V I +LE ECQRL
Sbjct: 194 LDSTEKENAFLRYEYTVLEKDLQVKTEETEHTRRSMELTHKQQLRNVNKIVELEAECQRL 253
Query: 149 RVLLRKKLP 157
R+L RKK P
Sbjct: 254 RLLFRKKFP 262
>AT1G77580.2 | Symbols: | Plant protein of unknown function
(DUF869) | chr1:29144191-29146793 REVERSE LENGTH=779
Length = 779
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 35/152 (23%)
Query: 2 ECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSL 61
EC RQ+R ++E EQ++Q+ V+ ++Q ELQ+ L+ + E A ++ L
Sbjct: 134 ECVRQLRQARDEQEQRIQDAVIERTQ-------ELQSSRTSLENQIFETATKSEEL---- 182
Query: 62 QDSXXXXXXXXXXXXXXXXXXXXXXXXVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIM 121
+S KE L++EL +EL+IR E+ +
Sbjct: 183 ------------------------SQMAESVAKENVMLRHELLARCEELEIRTIERDLST 218
Query: 122 RSADVANKQQLEDVKNIAKLEGECQRLRVLLR 153
++A+ A+KQQL+ +K +AKLE EC++ R+L +
Sbjct: 219 QAAETASKQQLDSIKKVAKLEAECRKFRMLAK 250
>AT1G77580.1 | Symbols: | Plant protein of unknown function
(DUF869) | chr1:29144632-29146600 REVERSE LENGTH=629
Length = 629
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 35/152 (23%)
Query: 2 ECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSL 61
EC RQ+R ++E EQ++Q+ V+ ++Q ELQ+ L+ + E A ++ L
Sbjct: 100 ECVRQLRQARDEQEQRIQDAVIERTQ-------ELQSSRTSLENQIFETATKSEEL---- 148
Query: 62 QDSXXXXXXXXXXXXXXXXXXXXXXXXVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIM 121
+S KE L++EL +EL+IR E+ +
Sbjct: 149 ------------------------SQMAESVAKENVMLRHELLARCEELEIRTIERDLST 184
Query: 122 RSADVANKQQLEDVKNIAKLEGECQRLRVLLR 153
++A+ A+KQQL+ +K +AKLE EC++ R+L +
Sbjct: 185 QAAETASKQQLDSIKKVAKLEAECRKFRMLAK 216
>AT2G24470.1 | Symbols: | Plant protein of unknown function
(DUF869) | chr2:10395828-10396622 REVERSE LENGTH=92
Length = 92
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 12 EESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSLQ 62
++S+QKLQ+V L K+ W KIK L+ +I++L +GL A +NAAL RSLQ
Sbjct: 17 DKSDQKLQDVTLAKTTHWGKIKAMLEEKIDELSQGLHRVASDNAALTRSLQ 67