Miyakogusa Predicted Gene
- Lj2g3v1695290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1695290.1 Non Chatacterized Hit- tr|C6TN52|C6TN52_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,60.92,0.000000000000002,FAMILY NOT NAMED,NULL;
coiled-coil,NULL,CUFF.37679.1
(344 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17990.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 353 1e-97
AT5G66250.3 | Symbols: | kinectin-related | chr5:26469050-26470... 305 2e-83
AT5G66250.2 | Symbols: | kinectin-related | chr5:26469050-26470... 305 2e-83
AT5G66250.1 | Symbols: | kinectin-related | chr5:26469050-26470... 305 2e-83
AT5G66250.4 | Symbols: | kinectin-related | chr5:26469050-26470... 294 6e-80
AT4G36105.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 184 6e-47
AT4G36105.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 184 7e-47
>AT2G17990.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast
hits to 6129 proteins in 783 species: Archae - 220;
Bacteria - 1045; Metazoa - 3605; Fungi - 575; Plants -
442; Viruses - 38; Other Eukaryotes - 1653 (source: NCBI
BLink). | chr2:7827480-7828596 FORWARD LENGTH=338
Length = 338
Score = 353 bits (906), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/349 (55%), Positives = 258/349 (73%), Gaps = 16/349 (4%)
Query: 1 MAADEDICMSDLKSQLSQLHDTWKQEIERSQSQMDLLQAKLMEVKDCIQ-GSDGDAKKEL 59
MA E+ +S S + + W+ E+E + Q+D L+A+L++VK ++ GS+ DA+KEL
Sbjct: 1 MAGKEETDVSAQGSLTREATEIWRSELESRRFQVDSLEAELVDVKAYLEFGSEEDARKEL 60
Query: 60 EVLLRRVNTSATLLTYLKSKARLMAVPH-LAHTSCGIKPLE---GVGFVDKNGTPLSGWS 115
VL RV ++AT+L YL+SKAR++A+P LA+ SCG++ +E G+ V+K+G
Sbjct: 61 GVLSGRVRSTATMLRYLRSKARVLAIPDDLANVSCGVEQIEELKGLNLVEKDGG------ 114
Query: 116 SDVELSSFNDADEESWIGISRQHGFLDEQDAAYIGDVLKSVNMVGDVMEVLVKRVLLAES 175
SS +D + R G L +D AY ++L+S+ MV DV++ LV+RV +AES
Sbjct: 115 -----SSSSDGARNTNPETRRYSGSLGVEDGAYTNEMLQSIEMVTDVLDSLVRRVTVAES 169
Query: 176 ETAVEKEKASLCQEEIKRKSARLENMSMKLEEMQHFVLSTNSIINEMQQRVEDLVEETTR 235
E+AV+KE+A L +EEI RK+ ++EN+S+KLEEM+ F TNS++NEM++R+E+LVEET R
Sbjct: 170 ESAVQKERALLGEEEISRKTIQIENLSVKLEEMERFAYGTNSVLNEMRERIEELVEETMR 229
Query: 236 QSQRAAENEEELSRVKQEFESLKSYVSGLITVRETLLSSEKQFQTIEKLFEKLVAKTTQL 295
Q ++A ENEEEL RVK+EFESLKSYVS VRETLLSSE+QF+TIE+LFE+LV KTTQL
Sbjct: 230 QREKAVENEEELCRVKREFESLKSYVSTFTNVRETLLSSERQFKTIEELFERLVTKTTQL 289
Query: 296 EGEKMQKEAEVQKLMEENVKLNAQLDKKEAQLLALNEQCKVMALSASNM 344
EGEK QKE EVQKLMEENVKL A LDKKEAQLLALNEQCKVMALSASN+
Sbjct: 290 EGEKAQKEVEVQKLMEENVKLTALLDKKEAQLLALNEQCKVMALSASNI 338
>AT5G66250.3 | Symbols: | kinectin-related | chr5:26469050-26470376
FORWARD LENGTH=306
Length = 306
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/344 (51%), Positives = 232/344 (67%), Gaps = 42/344 (12%)
Query: 1 MAADEDICMSDLKSQLSQ-LHDTW-KQEIERSQS-QMDLLQAKLMEVKDCIQGSDGDAKK 57
MA E + S L+S++++ HD W + +E+S+S + +L+ + + +D S A+K
Sbjct: 1 MAEKEVVSASTLESKITEDHHDIWIRGAMEKSRSSNISVLKDRFIAAEDSALVSKDVAQK 60
Query: 58 ELEVLLRRVNTSATLLTYLKSKARLMAVPHLAHTSCGIKPLEGVGFVDKNGTPLSGWSSD 117
++E+LLRRV T+ LLTYLKSKA +A LA+ S L+
Sbjct: 61 DIEILLRRVKTATALLTYLKSKATTVAAADLANLSLETDQLQDT---------------- 104
Query: 118 VELSSFNDADEESWIGISRQHGFLDEQDAAYIGDVLKSVNMVGDVMEVLVKRVLLAESET 177
+DE D Y+ ++L+ V V VME L +R +AESE
Sbjct: 105 -----------------------IDEHDGTYVTEMLQHVETVTGVMESLARRAFIAESEA 141
Query: 178 AVEKEKASLCQEEIKRKSARLENMSMKLEEMQHFVLSTNSIINEMQQRVEDLVEETTRQS 237
A+EK K L QEEI+RK +LENMS+KLE+M+ F L T+SI+ EM+QRV+DLVEET+RQ
Sbjct: 142 AIEKGKVVLSQEEIQRKVGQLENMSVKLEDMEKFALGTSSILCEMRQRVDDLVEETSRQK 201
Query: 238 QRAAENEEELSRVKQEFESLKSYVSGLITVRETLLSSEKQFQTIEKLFEKLVAKTTQLEG 297
QRA ENE ELSRV+++FESLKSYV+ LI+VRETL+SSEKQFQTIE+LFE+LVAKTTQLE
Sbjct: 202 QRATENELELSRVRRDFESLKSYVTSLISVRETLVSSEKQFQTIERLFERLVAKTTQLES 261
Query: 298 EKMQKEAEVQKLMEENVKLNAQLDKKEAQLLALNEQCKVMALSA 341
EK+QKEAEVQKLMEENV+L A +DKKEAQLLA+NEQCK+MALS+
Sbjct: 262 EKVQKEAEVQKLMEENVRLTALVDKKEAQLLAMNEQCKMMALSS 305
>AT5G66250.2 | Symbols: | kinectin-related | chr5:26469050-26470376
FORWARD LENGTH=306
Length = 306
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/344 (51%), Positives = 232/344 (67%), Gaps = 42/344 (12%)
Query: 1 MAADEDICMSDLKSQLSQ-LHDTW-KQEIERSQS-QMDLLQAKLMEVKDCIQGSDGDAKK 57
MA E + S L+S++++ HD W + +E+S+S + +L+ + + +D S A+K
Sbjct: 1 MAEKEVVSASTLESKITEDHHDIWIRGAMEKSRSSNISVLKDRFIAAEDSALVSKDVAQK 60
Query: 58 ELEVLLRRVNTSATLLTYLKSKARLMAVPHLAHTSCGIKPLEGVGFVDKNGTPLSGWSSD 117
++E+LLRRV T+ LLTYLKSKA +A LA+ S L+
Sbjct: 61 DIEILLRRVKTATALLTYLKSKATTVAAADLANLSLETDQLQDT---------------- 104
Query: 118 VELSSFNDADEESWIGISRQHGFLDEQDAAYIGDVLKSVNMVGDVMEVLVKRVLLAESET 177
+DE D Y+ ++L+ V V VME L +R +AESE
Sbjct: 105 -----------------------IDEHDGTYVTEMLQHVETVTGVMESLARRAFIAESEA 141
Query: 178 AVEKEKASLCQEEIKRKSARLENMSMKLEEMQHFVLSTNSIINEMQQRVEDLVEETTRQS 237
A+EK K L QEEI+RK +LENMS+KLE+M+ F L T+SI+ EM+QRV+DLVEET+RQ
Sbjct: 142 AIEKGKVVLSQEEIQRKVGQLENMSVKLEDMEKFALGTSSILCEMRQRVDDLVEETSRQK 201
Query: 238 QRAAENEEELSRVKQEFESLKSYVSGLITVRETLLSSEKQFQTIEKLFEKLVAKTTQLEG 297
QRA ENE ELSRV+++FESLKSYV+ LI+VRETL+SSEKQFQTIE+LFE+LVAKTTQLE
Sbjct: 202 QRATENELELSRVRRDFESLKSYVTSLISVRETLVSSEKQFQTIERLFERLVAKTTQLES 261
Query: 298 EKMQKEAEVQKLMEENVKLNAQLDKKEAQLLALNEQCKVMALSA 341
EK+QKEAEVQKLMEENV+L A +DKKEAQLLA+NEQCK+MALS+
Sbjct: 262 EKVQKEAEVQKLMEENVRLTALVDKKEAQLLAMNEQCKMMALSS 305
>AT5G66250.1 | Symbols: | kinectin-related | chr5:26469050-26470376
FORWARD LENGTH=306
Length = 306
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/344 (51%), Positives = 232/344 (67%), Gaps = 42/344 (12%)
Query: 1 MAADEDICMSDLKSQLSQ-LHDTW-KQEIERSQS-QMDLLQAKLMEVKDCIQGSDGDAKK 57
MA E + S L+S++++ HD W + +E+S+S + +L+ + + +D S A+K
Sbjct: 1 MAEKEVVSASTLESKITEDHHDIWIRGAMEKSRSSNISVLKDRFIAAEDSALVSKDVAQK 60
Query: 58 ELEVLLRRVNTSATLLTYLKSKARLMAVPHLAHTSCGIKPLEGVGFVDKNGTPLSGWSSD 117
++E+LLRRV T+ LLTYLKSKA +A LA+ S L+
Sbjct: 61 DIEILLRRVKTATALLTYLKSKATTVAAADLANLSLETDQLQDT---------------- 104
Query: 118 VELSSFNDADEESWIGISRQHGFLDEQDAAYIGDVLKSVNMVGDVMEVLVKRVLLAESET 177
+DE D Y+ ++L+ V V VME L +R +AESE
Sbjct: 105 -----------------------IDEHDGTYVTEMLQHVETVTGVMESLARRAFIAESEA 141
Query: 178 AVEKEKASLCQEEIKRKSARLENMSMKLEEMQHFVLSTNSIINEMQQRVEDLVEETTRQS 237
A+EK K L QEEI+RK +LENMS+KLE+M+ F L T+SI+ EM+QRV+DLVEET+RQ
Sbjct: 142 AIEKGKVVLSQEEIQRKVGQLENMSVKLEDMEKFALGTSSILCEMRQRVDDLVEETSRQK 201
Query: 238 QRAAENEEELSRVKQEFESLKSYVSGLITVRETLLSSEKQFQTIEKLFEKLVAKTTQLEG 297
QRA ENE ELSRV+++FESLKSYV+ LI+VRETL+SSEKQFQTIE+LFE+LVAKTTQLE
Sbjct: 202 QRATENELELSRVRRDFESLKSYVTSLISVRETLVSSEKQFQTIERLFERLVAKTTQLES 261
Query: 298 EKMQKEAEVQKLMEENVKLNAQLDKKEAQLLALNEQCKVMALSA 341
EK+QKEAEVQKLMEENV+L A +DKKEAQLLA+NEQCK+MALS+
Sbjct: 262 EKVQKEAEVQKLMEENVRLTALVDKKEAQLLAMNEQCKMMALSS 305
>AT5G66250.4 | Symbols: | kinectin-related | chr5:26469050-26470376
FORWARD LENGTH=326
Length = 326
Score = 294 bits (753), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 177/364 (48%), Positives = 232/364 (63%), Gaps = 62/364 (17%)
Query: 1 MAADEDICMSDLKSQLSQ-LHDTW-KQEIERSQS-QMDLLQAKLMEVKDCIQGSDGDAKK 57
MA E + S L+S++++ HD W + +E+S+S + +L+ + + +D S A+K
Sbjct: 1 MAEKEVVSASTLESKITEDHHDIWIRGAMEKSRSSNISVLKDRFIAAEDSALVSKDVAQK 60
Query: 58 ELEVLLRRVNTSATLLTYLKSKARLMAVPHLAHTSCGIKPLEGVGFVDKNGTPLSGWSSD 117
++E+LLRRV T+ LLTYLKSKA +A LA+ S L+
Sbjct: 61 DIEILLRRVKTATALLTYLKSKATTVAAADLANLSLETDQLQDT---------------- 104
Query: 118 VELSSFNDADEESWIGISRQHGFLDEQDAAYIGDVLKSVNMVGDVMEVLVKRVLLAESET 177
+DE D Y+ ++L+ V V VME L +R +AESE
Sbjct: 105 -----------------------IDEHDGTYVTEMLQHVETVTGVMESLARRAFIAESEA 141
Query: 178 AVEKEKASLCQEEIKRKSARLENMSMKLEEMQHFVLSTNSIINEMQQRVEDLVEETTRQS 237
A+EK K L QEEI+RK +LENMS+KLE+M+ F L T+SI+ EM+QRV+DLVEET+RQ
Sbjct: 142 AIEKGKVVLSQEEIQRKVGQLENMSVKLEDMEKFALGTSSILCEMRQRVDDLVEETSRQK 201
Query: 238 QRAAENEEELSRVKQEFESLKSYVSGLITVRETLLSSEKQFQTIEKLFE----------- 286
QRA ENE ELSRV+++FESLKSYV+ LI+VRETL+SSEKQFQTIE+LFE
Sbjct: 202 QRATENELELSRVRRDFESLKSYVTSLISVRETLVSSEKQFQTIERLFERFIIVSKFAFM 261
Query: 287 ---------KLVAKTTQLEGEKMQKEAEVQKLMEENVKLNAQLDKKEAQLLALNEQCKVM 337
KLVAKTTQLE EK+QKEAEVQKLMEENV+L A +DKKEAQLLA+NEQCK+M
Sbjct: 262 ASCFRGYKQKLVAKTTQLESEKVQKEAEVQKLMEENVRLTALVDKKEAQLLAMNEQCKMM 321
Query: 338 ALSA 341
ALS+
Sbjct: 322 ALSS 325
>AT4G36105.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: leaf apex,
cauline leaf, flower, carpel, leaf; EXPRESSED DURING:
LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1). | chr4:17083965-17084951 FORWARD
LENGTH=251
Length = 251
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 173/304 (56%), Gaps = 74/304 (24%)
Query: 46 DCIQGSDGDAKKELEVLLRRVNTSATLLTYLKSKARLMAVPHLAHTSCGIKPLEGVGFVD 105
DC S+ DA+KEL+VLL RV ++AT L+YL+SKAR++AVP L S G + L+
Sbjct: 17 DC---SEEDARKELKVLLDRVKSAATSLSYLRSKARILAVPGL---SLGAQQLQL----- 65
Query: 106 KNGTPLSGWSSDVELSSFNDADEESWIGISRQHGFLDEQDAAYIGDVLKSVNMV-GDVME 164
D+ + G ++ L +D Y + L+S+ MV D +E
Sbjct: 66 --------------------KDDTTLAGTNKNKDSLVIEDGVYTLNTLQSIEMVITDALE 105
Query: 165 VLVKRVLLAESETAVEKEKASLCQEEIKRKSARLENMSMKLEEMQHFVLSTNSIINEMQQ 224
L++RV AESET KEK +C+EEI RK+ +++N+S++LE+ + V++
Sbjct: 106 SLLRRVTAAESETCSHKEKVIICEEEITRKTVQIQNLSLRLEQTERIVMT---------- 155
Query: 225 RVEDLVEETTRQSQRAAENEEELSRVKQEFESLKSYVSGLITVRETLLSSEKQ-FQTIE- 282
E ESLK+ ++ V +TLLSS ++ FQTIE
Sbjct: 156 ----------------------------ECESLKNALTASNNVLDTLLSSSRRHFQTIEA 187
Query: 283 --KLFEKLVAKTTQLEGEKMQKEAEVQKLMEENVKLNAQLDKKEAQLLALNEQCKVMALS 340
KL LVAK+TQLEGEK QKE +VQKLMEEN+KL LDKKEAQLLALNEQCKVMAL+
Sbjct: 188 RYKLQSMLVAKSTQLEGEKAQKEVQVQKLMEENMKLTTLLDKKEAQLLALNEQCKVMALN 247
Query: 341 ASNM 344
ASN+
Sbjct: 248 ASNI 251
>AT4G36105.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus;
EXPRESSED IN: 6 plant structures; EXPRESSED DURING:
LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:17083965-17084951 FORWARD LENGTH=245
Length = 245
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 172/301 (57%), Gaps = 74/301 (24%)
Query: 46 DCIQGSDGDAKKELEVLLRRVNTSATLLTYLKSKARLMAVPHLAHTSCGIKPLEGVGFVD 105
DC S+ DA+KEL+VLL RV ++AT L+YL+SKAR++AVP L S G + L+
Sbjct: 17 DC---SEEDARKELKVLLDRVKSAATSLSYLRSKARILAVPGL---SLGAQQLQL----- 65
Query: 106 KNGTPLSGWSSDVELSSFNDADEESWIGISRQHGFLDEQDAAYIGDVLKSVNMV-GDVME 164
D+ + G ++ L +D Y + L+S+ MV D +E
Sbjct: 66 --------------------KDDTTLAGTNKNKDSLVIEDGVYTLNTLQSIEMVITDALE 105
Query: 165 VLVKRVLLAESETAVEKEKASLCQEEIKRKSARLENMSMKLEEMQHFVLSTNSIINEMQQ 224
L++RV AESET KEK +C+EEI RK+ +++N+S++LE+ + V++
Sbjct: 106 SLLRRVTAAESETCSHKEKVIICEEEITRKTVQIQNLSLRLEQTERIVMT---------- 155
Query: 225 RVEDLVEETTRQSQRAAENEEELSRVKQEFESLKSYVSGLITVRETLLSSEKQ-FQTIEK 283
E ESLK+ ++ V +TLLSS ++ FQTIE
Sbjct: 156 ----------------------------ECESLKNALTASNNVLDTLLSSSRRHFQTIEA 187
Query: 284 LFEKLVAKTTQLEGEKMQKEAEVQKLMEENVKLNAQLDKKEAQLLALNEQCKVMALSASN 343
+LVAK+TQLEGEK QKE +VQKLMEEN+KL LDKKEAQLLALNEQCKVMAL+ASN
Sbjct: 188 ---RLVAKSTQLEGEKAQKEVQVQKLMEENMKLTTLLDKKEAQLLALNEQCKVMALNASN 244
Query: 344 M 344
+
Sbjct: 245 I 245