Miyakogusa Predicted Gene

Lj2g3v1695200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1695200.1 Non Chatacterized Hit- tr|H9V2B0|H9V2B0_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,64.18,0.0000000000002,FAMILY NOT NAMED,NULL; ARM
repeat,Armadillo-type fold; no description,Armadillo-like helical;
seg,NU,NODE_29960_length_1288_cov_94.891304.path1.1
         (320 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66200.1 | Symbols: ARO2 | armadillo repeat only 2 | chr5:264...   401   e-112
AT4G34940.1 | Symbols: ARO1 | armadillo repeat only 1 | chr4:166...   382   e-106
AT4G36030.1 | Symbols: ARO3 | armadillo repeat only 3 | chr4:170...   362   e-100
AT3G26600.1 | Symbols: ARO4 | armadillo repeat only 4 | chr3:976...   211   6e-55

>AT5G66200.1 | Symbols: ARO2 | armadillo repeat only 2 |
           chr5:26453648-26455603 REVERSE LENGTH=651
          Length = 651

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/260 (75%), Positives = 223/260 (85%)

Query: 60  KGRDNEDPETKASMKEMAARALWHLAKGNVPICRSITESRALLCFAVLLEKGEEKVQYNS 119
           K R+ ED  TK  +K MAARALW LAKGN  IC+SITESRALLCFAVL+EKG+E+V+YNS
Sbjct: 392 KTRELEDSATKCQIKAMAARALWKLAKGNSTICKSITESRALLCFAVLIEKGDEEVRYNS 451

Query: 120 AMAVMEITAVAEKDADLRKSAFKPNSPACKAVVDQLLKIIEKADSDLLIPCVSAIGNLAR 179
           AMA+MEITAVAE+DADLR+SAFKPNSPACKAVVDQ+L+IIE ADS+LLIPC+  IGNLAR
Sbjct: 452 AMALMEITAVAEQDADLRRSAFKPNSPACKAVVDQVLRIIEIADSELLIPCIRTIGNLAR 511

Query: 180 TFRATETRMIGPLVRLLDEREAEVYREASIALTKFACTDNYLHLDHSKAIITAGGAKHLI 239
           TFRATETRMIGPLV+LLDERE EV  EA+ ALTKFACT NYLH DHS+ II AGG KHL+
Sbjct: 512 TFRATETRMIGPLVKLLDEREPEVTGEAAAALTKFACTANYLHKDHSRGIIEAGGGKHLV 571

Query: 240 QLVYFGEQMVQIPALVLLSYIALHVPDSEELAQDEVLGVLEWASKQSSMTHDETLEALLQ 299
           QL YFGE  VQIPAL LL YIAL+VPDSE+LA+DEVL VLEWASKQS +T  E+LEALLQ
Sbjct: 572 QLAYFGEGGVQIPALELLCYIALNVPDSEQLAKDEVLAVLEWASKQSWVTQLESLEALLQ 631

Query: 300 ESKSRLELYQSRGSRFHKLH 319
           E+K  L+LYQ RGSR +  +
Sbjct: 632 EAKRGLDLYQQRGSRGYNFN 651


>AT4G34940.1 | Symbols: ARO1 | armadillo repeat only 1 |
           chr4:16639760-16641754 FORWARD LENGTH=664
          Length = 664

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/262 (70%), Positives = 226/262 (86%), Gaps = 1/262 (0%)

Query: 56  GINMKGRDNEDPETKASMKEMAARALWHLAKGNVPICRSITESRALLCFAVLLEKGEEKV 115
           G ++KGR+ EDP TKA MK MAARALW L++GN+ ICRSITESRALLCFAVLLEKG+++V
Sbjct: 403 GTSIKGREYEDPATKAQMKAMAARALWQLSRGNLQICRSITESRALLCFAVLLEKGDDEV 462

Query: 116 QYNSAMAVMEITAVAEKDADLRKSAFKPNSPACKAVVDQLLKIIEKADSDLLIPCVSAIG 175
           +  SA+A+MEIT VAE+  +LR+SAFKP SPA KAVV+QLLK+IE    DLLIPC+ +IG
Sbjct: 463 KSYSALAMMEITDVAEQYPELRRSAFKPTSPAAKAVVEQLLKVIENEILDLLIPCIKSIG 522

Query: 176 NLARTFRATETRMIGPLVRLLDEREAEVYREASIALTKFACTDNYLHLDHSKAIITAGGA 235
           +L+RTFRATETR+IGPLV+LLDEREAE+  EA++AL KF+CT+N+L  +HSKAII AGGA
Sbjct: 523 SLSRTFRATETRIIGPLVKLLDEREAEIAMEAAVALIKFSCTENFLRDNHSKAIIAAGGA 582

Query: 236 KHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELAQDEVLGVLEWASKQSSMTHDETLE 295
           KHLIQLVYFGEQMVQ+PAL+LL YIAL+VPDSE LAQ+EVL VLEW++KQ+ +    T++
Sbjct: 583 KHLIQLVYFGEQMVQVPALMLLCYIALNVPDSETLAQEEVLVVLEWSTKQAHLVEAPTID 642

Query: 296 ALLQESKSRLELYQSRGSR-FH 316
            +L E+KSRLELYQSRGSR FH
Sbjct: 643 EILPEAKSRLELYQSRGSRGFH 664


>AT4G36030.1 | Symbols: ARO3 | armadillo repeat only 3 |
           chr4:17045084-17047096 REVERSE LENGTH=670
          Length = 670

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/260 (68%), Positives = 216/260 (83%), Gaps = 3/260 (1%)

Query: 60  KGRDNEDPETKASMKEMAARALWHLAKGNVPICRSITESRALLCFAVLLEKGEEKVQYNS 119
           +GR+ EDP TK  MK MAARALW LA GN  ICR ITESRALLCFAVLL+KG+E+ +YN+
Sbjct: 410 RGRELEDPVTKTYMKAMAARALWKLAVGNSSICRVITESRALLCFAVLLDKGDEETKYNT 469

Query: 120 AMAVMEITAVAEKDADLRKSAFKPNSPACKAVVDQLLKIIEKAD--SDLLIPCVSAIGNL 177
           AMA+MEITAVAE++ADLR+SAF+  SPACKAVVDQL +I+E AD  SDLLIPCV +IGNL
Sbjct: 470 AMAIMEITAVAEENADLRRSAFRRTSPACKAVVDQLFRIVENADAGSDLLIPCVRSIGNL 529

Query: 178 ARTFRATETRMIGPLVRLLDEREAEVYREASIALTKFACTDNYLHLDHSKAIITAGGAKH 237
           ARTF++ ET MI PLV+LLD+ E ++  E +IAL KFA  DN+L  +HS+ II AGG+K 
Sbjct: 530 ARTFKSAETHMIVPLVKLLDDGEPDLAAEVAIALAKFATEDNFLGKEHSRTIIEAGGSKL 589

Query: 238 LIQLVYFGEQMVQIPALVLLSYIALHVPDSEELAQDEVLGVLEWASKQSSMTHDETLEAL 297
           L+QL YFGE   QIPA+VLLSY+A++VPDSE+LA+DEVL VLEW+SKQ+++  DE +EAL
Sbjct: 590 LVQLAYFGENGAQIPAMVLLSYVAMNVPDSEQLAKDEVLTVLEWSSKQANVLEDEDMEAL 649

Query: 298 LQESKSRLELYQSRGSR-FH 316
           L E+KSRLELYQSRGSR FH
Sbjct: 650 LYEAKSRLELYQSRGSRGFH 669


>AT3G26600.1 | Symbols: ARO4 | armadillo repeat only 4 |
           chr3:9769889-9771736 FORWARD LENGTH=615
          Length = 615

 Score =  211 bits (536), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 120/259 (46%), Positives = 166/259 (64%), Gaps = 2/259 (0%)

Query: 53  SHSGINMKGRDNEDPETKASMKEMAARALWHLAKGNVPICRSITESRALLCFAVLLEKGE 112
           S +G   K RDNE+PE K  +K   A ALW LA+GNV   R ITE++ LL  A ++EK  
Sbjct: 346 SRTGNFKKERDNENPEVKHELKVNCAEALWMLARGNVANSRRITETKGLLSLAKIVEKEV 405

Query: 113 EKVQYNSAMAVMEITAVAEKDADLRKSAFKPNSPACKAVVDQLLKIIEKADSDLL-IPCV 171
            ++QYN  M +MEITA AE  ADLR++AFK NSPA KAV+DQ+L II+  DS +L IP +
Sbjct: 406 GELQYNCLMTLMEITAAAESSADLRRAAFKTNSPAAKAVIDQMLWIIKDVDSPILKIPAI 465

Query: 172 SAIGNLARTFRATETRMIGPLVRLLDEREAEVYREASIALTKFACTDNYLHLDHSKAIIT 231
            +IG+LARTF A ETRMI PLV  L     EV   A I+L KF C +N+L  +HSK II 
Sbjct: 466 QSIGSLARTFPARETRMIKPLVEKLGSSNQEVAITAVISLQKFVCPENFLCAEHSKNIIE 525

Query: 232 AGGAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELAQDEVLGVLEWASKQSSMTHD 291
            G    L++L+   EQ +Q+  L LL Y++++  + ++L Q +VL VLE A + + + + 
Sbjct: 526 YGAIPLLMKLIRNVEQQMQLQCLALLCYLSVNASNHQQLEQAKVLTVLEGAERLAGLQNM 585

Query: 292 ETLEALLQESKSRLELYQS 310
           E L  L+ ++  +L LY +
Sbjct: 586 E-LRELVSKAIYQLSLYNA 603