Miyakogusa Predicted Gene

Lj2g3v1691070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1691070.1 tr|B9NAQ8|B9NAQ8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_787432 PE=4
SV=1,42.64,7e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Senescence,Senescence/spartin-associated,CUFF.37657.1
         (229 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17840.1 | Symbols: ERD7 | Senescence/dehydration-associated ...   315   1e-86
AT3G51250.1 | Symbols:  | Senescence/dehydration-associated prot...   300   6e-82
AT4G35985.1 | Symbols:  | Senescence/dehydration-associated prot...   290   4e-79
AT4G15450.1 | Symbols:  | Senescence/dehydration-associated prot...   142   1e-34
AT3G21600.1 | Symbols:  | Senescence/dehydration-associated prot...   119   2e-27
AT3G21600.2 | Symbols:  | Senescence/dehydration-associated prot...    86   2e-17
AT3G21590.1 | Symbols:  | Senescence/dehydration-associated prot...    67   1e-11

>AT2G17840.1 | Symbols: ERD7 | Senescence/dehydration-associated
           protein-related | chr2:7755923-7757798 REVERSE
           LENGTH=452
          Length = 452

 Score =  315 bits (808), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 150/208 (72%), Positives = 176/208 (84%), Gaps = 1/208 (0%)

Query: 1   MMEERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKR 60
           ++E + +AYWTTLAPNVEDYS   A++IA GSGH++KGILWCGDVT+DRL WGN  MK+R
Sbjct: 231 IVERQCSAYWTTLAPNVEDYSGKAAKLIATGSGHLIKGILWCGDVTMDRLIWGNGFMKRR 290

Query: 61  LSSGSR-SEISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFF 119
           LS   + SE+ P TLKRIRRVKR+T+MTE VAN +LSGV+KVSGFFTSS+ N+KVGKKFF
Sbjct: 291 LSKAEKESEVHPDTLKRIRRVKRMTKMTESVANSILSGVLKVSGFFTSSVANTKVGKKFF 350

Query: 120 SLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGLNXX 179
           SLLPGEV+LASLDGF+KVCDAVEVAG+NVMSTSSTVTTELVDH+YG +AAEAT+EGL+  
Sbjct: 351 SLLPGEVILASLDGFNKVCDAVEVAGRNVMSTSSTVTTELVDHKYGGKAAEATNEGLDAA 410

Query: 180 XXXXXXXXXXFKIRKAINPKSVFKPTTL 207
                     FKIRKAINPKSV KP+TL
Sbjct: 411 GYALGTAWVAFKIRKAINPKSVLKPSTL 438


>AT3G51250.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr3:19028227-19030442 FORWARD
           LENGTH=463
          Length = 463

 Score =  300 bits (768), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 144/208 (69%), Positives = 174/208 (83%), Gaps = 1/208 (0%)

Query: 1   MMEERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKR 60
           ++E + AAYWTTLAPNVEDY+ +TA+MIA+GSG +++GILWCGDVTV+RL  GN+VMK R
Sbjct: 242 VVEGQCAAYWTTLAPNVEDYTHSTAKMIASGSGKLIRGILWCGDVTVERLKKGNEVMKNR 301

Query: 61  LSSGSRS-EISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFF 119
           LS   +  ++SP+TL+RI+RVKRVT+MTEKVA G+LSGVVKVSGF T S+ NSK GKK F
Sbjct: 302 LSRAEKEKDVSPETLRRIKRVKRVTQMTEKVATGVLSGVVKVSGFITGSMANSKAGKKLF 361

Query: 120 SLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGLNXX 179
            LLPGE+VLASLDGFSK+CDAVEVAGKNVMSTSSTVTTELV+HRYG +AAEAT+EGL+  
Sbjct: 362 GLLPGEIVLASLDGFSKICDAVEVAGKNVMSTSSTVTTELVNHRYGTKAAEATNEGLDAA 421

Query: 180 XXXXXXXXXXFKIRKAINPKSVFKPTTL 207
                     FKIRKA NPK+V KP++L
Sbjct: 422 GHAFGTAWVAFKIRKAFNPKNVIKPSSL 449


>AT4G35985.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr4:17032268-17033862 REVERSE
           LENGTH=448
          Length = 448

 Score =  290 bits (743), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 133/208 (63%), Positives = 172/208 (82%), Gaps = 1/208 (0%)

Query: 1   MMEERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKR 60
           M+E++  AYWTTLAPNVEDYS   A++IAAGSG ++KGILWCGD+T+DRL WGN  MKK+
Sbjct: 221 MVEKQCTAYWTTLAPNVEDYSGVAAKLIAAGSGQLIKGILWCGDLTMDRLMWGNDFMKKK 280

Query: 61  LSSGSRS-EISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFF 119
           LS   +  ++SP TLKR++RVK++T+MTEKVANG+LSGVVKVSGFF+SS++NSK G+K F
Sbjct: 281 LSKAEKERQVSPGTLKRLKRVKKMTKMTEKVANGVLSGVVKVSGFFSSSVINSKAGQKLF 340

Query: 120 SLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGLNXX 179
            LLPGE+VLA+LDGF+KVCDAVEVAG++VM T+S VTTE+VDH+YG + A+AT+EGL+  
Sbjct: 341 GLLPGEMVLATLDGFNKVCDAVEVAGRHVMKTTSDVTTEIVDHKYGAKTAQATNEGLSAA 400

Query: 180 XXXXXXXXXXFKIRKAINPKSVFKPTTL 207
                     FKIR+A+NPKS  KP++L
Sbjct: 401 GHAFGTAWTVFKIRQALNPKSAMKPSSL 428


>AT4G15450.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr4:8839437-8841162 FORWARD
           LENGTH=381
          Length = 381

 Score =  142 bits (359), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 117/198 (59%), Gaps = 7/198 (3%)

Query: 10  WTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVM-----KKRLSSG 64
           W   AP +EDY++  A+ IA G+GH+++G+  C +   ++++ G ++M     KK  +S 
Sbjct: 171 WKEFAPKIEDYNNVVAKAIAGGTGHIIRGMFKCSNAYTNQVHKGGEIMITKAEKKNGASS 230

Query: 65  SRSEISP--QTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFFSLL 122
            R+  +   Q  K ++RV++++R TEK++  +L+GV  VSG     +V SK GK FFS++
Sbjct: 231 KRNATTNKNQINKNLQRVRKLSRATEKLSKTMLNGVGVVSGSVMGPVVKSKPGKAFFSMV 290

Query: 123 PGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGLNXXXXX 182
           PGEV+LASLD  +K+ DA E A +  +S +S  TT +V  R GE A EAT + L      
Sbjct: 291 PGEVLLASLDALNKLLDAAEAAERQTLSATSKATTRMVSERLGESAGEATKDVLGTVGHA 350

Query: 183 XXXXXXXFKIRKAINPKS 200
                  F IRKA +P S
Sbjct: 351 AGTAWNVFNIRKAFSPSS 368


>AT3G21600.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr3:7606735-7608364 REVERSE
           LENGTH=374
          Length = 374

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 11/202 (5%)

Query: 10  WTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKRLSSGSRS-- 67
           W   AP +EDY++  A+ IA G+GH+++GI    +   ++++ G  +M  +     R+  
Sbjct: 160 WQEFAPRIEDYNNVVAKAIAGGTGHIIRGIFSLSNAYSNQVHKGGDIMITKAEESQRNGS 219

Query: 68  ---------EISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKF 118
                    E        ++RV+++++ TE ++  +L+G   VSG     ++ SK G  F
Sbjct: 220 YNNGNSSGNEKKNGINTHLQRVRKLSKATENLSKTMLNGAGVVSGSVMVPMMKSKPGMAF 279

Query: 119 FSLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGLNX 178
           FS++PGEV+LASLD  +K+ DA E A +  +S +S   T +V  R+G+ A EAT + L  
Sbjct: 280 FSMVPGEVLLASLDALNKILDATEAAERQTLSATSRAATRMVSERFGDNAGEATGDVLAT 339

Query: 179 XXXXXXXXXXXFKIRKAINPKS 200
                       KIRK   P S
Sbjct: 340 AGHAAGTAWNVLKIRKTFYPSS 361


>AT3G21600.2 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr3:7607077-7608364 REVERSE
           LENGTH=299
          Length = 299

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 11/138 (7%)

Query: 10  WTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKRLSSGSRS-- 67
           W   AP +EDY++  A+ IA G+GH+++GI    +   ++++ G  +M  +     R+  
Sbjct: 160 WQEFAPRIEDYNNVVAKAIAGGTGHIIRGIFSLSNAYSNQVHKGGDIMITKAEESQRNGS 219

Query: 68  ---------EISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKF 118
                    E        ++RV+++++ TE ++  +L+G   VSG     ++ SK G  F
Sbjct: 220 YNNGNSSGNEKKNGINTHLQRVRKLSKATENLSKTMLNGAGVVSGSVMVPMMKSKPGMAF 279

Query: 119 FSLLPGEVVLASLDGFSK 136
           FS++PGEV+LASLD  SK
Sbjct: 280 FSMVPGEVLLASLDALSK 297


>AT3G21590.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr3:7604636-7605789 REVERSE
           LENGTH=198
          Length = 198

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 11/135 (8%)

Query: 18  EDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNW-GNKVMKKRLSSGSRSEIS------ 70
           E  SST+A+ IA G+GH++KGI  C +    +++  G    +    SG  S+I       
Sbjct: 62  EKSSSTSAKAIAVGTGHIIKGIFTCSNSYSKKIHEEGTIAEEDEERSGDISQIDGGGNNE 121

Query: 71  ----PQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFFSLLPGEV 126
                +  K ++R +++ +++E +    L G   VS    + +V SK+GK   S  PGEV
Sbjct: 122 TNKKNKLNKNLQRAEKLWKVSEAIGMAALEGGDLVSSSMIAPVVKSKLGKALLSTAPGEV 181

Query: 127 VLASLDGFSKVCDAV 141
           +LASLD F K  D V
Sbjct: 182 ILASLDSFHKHFDVV 196