Miyakogusa Predicted Gene

Lj2g3v1671000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1671000.1 tr|G7JXJ9|G7JXJ9_MEDTR 3-dehydroquinate synthase
OS=Medicago truncatula GN=MTR_5g022580 PE=3
SV=1,81.98,0,DHQ_synthase,NULL; DHQ_synthase,3-dehydroquinate synthase
AroB; aroB: 3-dehydroquinate synthase,3-de,CUFF.37668.1
         (455 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66120.2 | Symbols:  | 3-dehydroquinate synthase, putative | ...   639   0.0  
AT5G66120.1 | Symbols:  | 3-dehydroquinate synthase, putative | ...   591   e-169

>AT5G66120.2 | Symbols:  | 3-dehydroquinate synthase, putative |
           chr5:26431516-26433649 REVERSE LENGTH=442
          Length = 442

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/386 (79%), Positives = 341/386 (88%), Gaps = 1/386 (0%)

Query: 71  ICASSSQVM-DPSAPIIEPGVPAIVDVDLGNRSYPIYIGSGLLQKPELLQRHVHGKRVLV 129
           + A +SQ+M +P         P +V+VDLG+RSYPIYIG+GLL   ELLQRHVHGKRVLV
Sbjct: 57  VRAGASQLMNEPLNDQRSISSPTVVEVDLGDRSYPIYIGAGLLDHSELLQRHVHGKRVLV 116

Query: 130 VTNETVAPLYLDKVIDALTKGNPNVSVESVILPDGEQYKNMDTLMKVFDKAIESRLDRRC 189
           VTN+ VAPLYLDK IDALT+GNPNV+VESVILPDGE+YK+MDTLMKVFDKAIESRLDRRC
Sbjct: 117 VTNDRVAPLYLDKTIDALTRGNPNVTVESVILPDGEKYKDMDTLMKVFDKAIESRLDRRC 176

Query: 190 TFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAF 249
           TFVALGGGVIGDMCG+AAA++LRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAF
Sbjct: 177 TFVALGGGVIGDMCGYAAASYLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAF 236

Query: 250 YQPQCVLIDTDTLSTLPERELASGFGEVIKYGLIRDAEFFEWQEKNMQALMARDPNALAY 309
           YQPQCVL+DTDTL+TLP+RE+ASG  EVIKYGLIRDAEFFEWQEKN++AL+ARDP ALA+
Sbjct: 237 YQPQCVLVDTDTLNTLPDREMASGLAEVIKYGLIRDAEFFEWQEKNIEALLARDPAALAF 296

Query: 310 AIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAAD 369
           AIKRSCENKA+VVS DEKESGLRATLNLGHTFGHAIETG GYG+WLHGEAVAAGTVMA D
Sbjct: 297 AIKRSCENKADVVSQDEKESGLRATLNLGHTFGHAIETGFGYGEWLHGEAVAAGTVMAVD 356

Query: 370 MSYRLGWIDDSIVRRVRDILIQAKLPIAPPETMTVDIFKNVMAVDKKVADXXXXXXXXXX 429
           MSYRLGWID+SIV+RV  IL++AKLP  PPE+MTV +FK++MAVDKKVAD          
Sbjct: 357 MSYRLGWIDESIVKRVNKILVRAKLPTTPPESMTVSMFKSIMAVDKKVADGLLRLILLKG 416

Query: 430 XXXNCVFTGDYDRKALDDTLNAFCKS 455
              NCVFTGDYDR+ALD TL AF KS
Sbjct: 417 PLGNCVFTGDYDREALDATLRAFSKS 442


>AT5G66120.1 | Symbols:  | 3-dehydroquinate synthase, putative |
           chr5:26431516-26433079 REVERSE LENGTH=338
          Length = 338

 Score =  591 bits (1523), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 280/336 (83%), Positives = 307/336 (91%)

Query: 120 RHVHGKRVLVVTNETVAPLYLDKVIDALTKGNPNVSVESVILPDGEQYKNMDTLMKVFDK 179
           RHVHGKRVLVVTN+ VAPLYLDK IDALT+GNPNV+VESVILPDGE+YK+MDTLMKVFDK
Sbjct: 3   RHVHGKRVLVVTNDRVAPLYLDKTIDALTRGNPNVTVESVILPDGEKYKDMDTLMKVFDK 62

Query: 180 AIESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTVMAQVDSSVGGKTGINH 239
           AIESRLDRRCTFVALGGGVIGDMCG+AAA++LRGVNFIQIPTTVMAQVDSSVGGKTGINH
Sbjct: 63  AIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGVNFIQIPTTVMAQVDSSVGGKTGINH 122

Query: 240 RLGKNLIGAFYQPQCVLIDTDTLSTLPERELASGFGEVIKYGLIRDAEFFEWQEKNMQAL 299
           RLGKNLIGAFYQPQCVL+DTDTL+TLP+RE+ASG  EVIKYGLIRDAEFFEWQEKN++AL
Sbjct: 123 RLGKNLIGAFYQPQCVLVDTDTLNTLPDREMASGLAEVIKYGLIRDAEFFEWQEKNIEAL 182

Query: 300 MARDPNALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGVGYGQWLHGEA 359
           +ARDP ALA+AIKRSCENKA+VVS DEKESGLRATLNLGHTFGHAIETG GYG+WLHGEA
Sbjct: 183 LARDPAALAFAIKRSCENKADVVSQDEKESGLRATLNLGHTFGHAIETGFGYGEWLHGEA 242

Query: 360 VAAGTVMAADMSYRLGWIDDSIVRRVRDILIQAKLPIAPPETMTVDIFKNVMAVDKKVAD 419
           VAAGTVMA DMSYRLGWID+SIV+RV  IL++AKLP  PPE+MTV +FK++MAVDKKVAD
Sbjct: 243 VAAGTVMAVDMSYRLGWIDESIVKRVNKILVRAKLPTTPPESMTVSMFKSIMAVDKKVAD 302

Query: 420 XXXXXXXXXXXXXNCVFTGDYDRKALDDTLNAFCKS 455
                        NCVFTGDYDR+ALD TL AF KS
Sbjct: 303 GLLRLILLKGPLGNCVFTGDYDREALDATLRAFSKS 338