Miyakogusa Predicted Gene
- Lj2g3v1670990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1670990.1 Non Chatacterized Hit- tr|I3T9Y4|I3T9Y4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.48,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; RHO,Small GTPase
superfamily, Rho type; R,CUFF.37653.1
(197 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 357 4e-99
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 357 4e-99
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 357 4e-99
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |... 353 3e-98
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP... 343 4e-95
AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 342 1e-94
AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 342 1e-94
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-l... 342 1e-94
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related... 336 5e-93
AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-l... 331 2e-91
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-lik... 313 5e-86
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-relat... 310 6e-85
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | RHO-r... 300 6e-82
AT3G51290.2 | Symbols: | Protein of unknown function (DUF630) ;... 297 3e-81
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-lik... 289 7e-79
AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-bindi... 95 3e-20
AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 95 3e-20
AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 95 3e-20
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | R... 95 3e-20
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-relat... 94 5e-20
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 92 2e-19
AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 92 2e-19
AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 92 2e-19
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTP... 92 2e-19
AT5G59840.1 | Symbols: | Ras-related small GTP-binding family p... 92 3e-19
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 91 4e-19
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, R... 90 9e-19
AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homo... 89 2e-18
AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 87 8e-18
AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 87 8e-18
AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 87 8e-18
AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E... 87 9e-18
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-rela... 87 9e-18
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 87 1e-17
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 86 1e-17
AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A... 86 1e-17
AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C... 85 3e-17
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 84 7e-17
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase hom... 84 8e-17
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | Ras-rel... 84 8e-17
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RAB... 84 9e-17
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB... 83 9e-17
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small... 83 9e-17
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase ho... 83 1e-16
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase hom... 83 1e-16
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, R... 82 2e-16
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase ho... 82 2e-16
AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G... 82 2e-16
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 82 3e-16
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D... 81 4e-16
AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D... 81 4e-16
AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C... 81 5e-16
AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F... 80 6e-16
AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |... 80 8e-16
AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B... 80 9e-16
AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I... 80 1e-15
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 80 1e-15
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 79 1e-15
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase hom... 79 1e-15
AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B... 79 2e-15
AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H | chr2:... 79 2e-15
AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E... 79 2e-15
AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A... 78 5e-15
AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A... 77 8e-15
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPas... 76 2e-14
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB G... 76 2e-14
AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D... 75 2e-14
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RA... 75 3e-14
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase ... 75 3e-14
AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homol... 75 3e-14
AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A... 74 5e-14
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase ho... 74 6e-14
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homo... 74 6e-14
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 73 1e-13
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 73 1e-13
AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 73 1e-13
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, R... 72 2e-13
AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 | chr5:972... 72 2e-13
AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |... 72 2e-13
AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 72 3e-13
AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 72 3e-13
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase h... 72 3e-13
AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A | chr5:25... 71 6e-13
AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protei... 70 8e-13
AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A | chr4:61... 69 2e-12
AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 | c... 69 2e-12
AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 67 9e-12
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:223922... 67 9e-12
AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear pr... 67 1e-11
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear... 67 1e-11
AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 65 3e-11
AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 | ... 62 2e-10
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 62 3e-10
AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 52 3e-07
AT2G21880.2 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homo... 50 7e-07
AT3G05310.1 | Symbols: MIRO3 | MIRO-related GTP-ase 3 | chr3:151... 49 3e-06
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 357 bits (915), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 175/197 (88%), Positives = 178/197 (90%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+ VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVLXX 180
DLRDDKQF IDHPGAVPITTAQGEEL+KLI APAYIECSSKTQENVK VFDAAIRVVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXXCSIL 197
CSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 357 bits (915), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 175/197 (88%), Positives = 178/197 (90%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+ VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVLXX 180
DLRDDKQF IDHPGAVPITTAQGEEL+KLI APAYIECSSKTQENVK VFDAAIRVVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXXCSIL 197
CSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 |
RHO-related protein from plants 1 |
chr3:19043197-19044215 FORWARD LENGTH=197
Length = 197
Score = 357 bits (915), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 175/197 (88%), Positives = 177/197 (89%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
MSASRF+KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGS VNLGLWD
Sbjct: 1 MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVLXX 180
DLRDDKQF IDHPGAVPITTAQGEELRK I AP YIECSSKTQENVKAVFDAAIRVVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXXCSIL 197
CSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |
RAC-like 6 | chr4:17024051-17025514 REVERSE LENGTH=197
Length = 197
Score = 353 bits (907), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 173/197 (87%), Positives = 177/197 (89%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+ VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVLXX 180
DLRDDKQF IDHPGAVPITT QGEEL+KLI APAYIECSSK+QENVK VFDAAIRVVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXXCSIL 197
CSIL
Sbjct: 181 PKQKKKKNKAQKACSIL 197
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP
binding protein 5 | chr1:28475964-28477377 FORWARD
LENGTH=196
Length = 196
Score = 343 bits (881), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 164/178 (92%), Positives = 173/178 (97%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+ VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
DLRDDKQF IDHPGAVPITT QGEEL+KLI +P YIECSSKTQ+NVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178
>AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 342 bits (876), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 160/178 (89%), Positives = 174/178 (97%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+G+ +NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENVSKKW+PEL+HYAPGVPIILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
DLRDDKQF +HPGAVPI+TAQGEEL+KLI APAYIECS+KTQ+NVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVL 178
>AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 342 bits (876), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 160/178 (89%), Positives = 174/178 (97%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+G+ +NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENVSKKW+PEL+HYAPGVPIILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
DLRDDKQF +HPGAVPI+TAQGEEL+KLI APAYIECS+KTQ+NVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVL 178
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-like
3 | chr4:16673176-16674540 FORWARD LENGTH=198
Length = 198
Score = 342 bits (876), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 160/178 (89%), Positives = 174/178 (97%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+G+ +NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENVSKKW+PEL+HYAPGVPIILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
DLRDDKQF +HPGAVPI+TAQGEEL+KLI APAYIECS+KTQ+NVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVL 178
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related
protein from plants 2 | chr1:6967223-6968603 FORWARD
LENGTH=195
Length = 195
Score = 336 bits (862), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 160/176 (90%), Positives = 170/176 (96%)
Query: 3 ASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWDTA 62
ASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+ VNLGLWDTA
Sbjct: 2 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTA 61
Query: 63 GQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDL 122
GQEDYNRLRPLSYRGADVFILAFSLISKASYEN++KKWIPEL+HYAPGVPIILVGTKLDL
Sbjct: 62 GQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDL 121
Query: 123 RDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
RDDKQF IDHPGAVPITT QGEEL+KLI + YIECSSKTQ+NVKAVFDAAI+VVL
Sbjct: 122 RDDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVL 177
>AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-like
2 | chr5:18643761-18645758 FORWARD LENGTH=201
Length = 201
Score = 331 bits (849), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 155/178 (87%), Positives = 166/178 (93%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GS VNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+ KKW+PELKHYAPG+PI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
DLRDDKQF DHPGA ITTAQGEELRK+I A Y+ECSSKTQ+NVKAVFD AIRV L
Sbjct: 121 DLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178
>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-like
10 | chr5:25237236-25238939 FORWARD LENGTH=215
Length = 215
Score = 313 bits (802), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 163/177 (92%)
Query: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWDT 61
SAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANVVV G+ VNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLD 121
AGQEDYNRLRPLSYRGADVF+L+FSL+S+ASYENV KKWIPEL+H+APGVP++LVGTKLD
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGTKLD 123
Query: 122 LRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
LR+DK + DHPG P+TTAQGEELRKLI A YIECSSKTQ+NVKAVFD+AI+ V+
Sbjct: 124 LREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAIKEVI 180
>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-related
protein from plants 10 | chr3:17731561-17733241 FORWARD
LENGTH=208
Length = 208
Score = 310 bits (793), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 161/177 (90%)
Query: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWDT 61
SAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFS NVVV G VNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLD 121
AGQEDYNRLRPLSYRGADVF+LAFSLIS+ASYENV KKWIPEL+H+APGVPI+LVGTK+D
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKMD 123
Query: 122 LRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
LR+D+ + DHPG P+TT+QGEELRK I A YIECSSKTQ+NVKAVFDAAI+VV+
Sbjct: 124 LREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVI 180
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 |
RHO-related protein from plants 9 |
chr4:14278289-14279705 FORWARD LENGTH=209
Length = 209
Score = 300 bits (767), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 158/178 (88%), Gaps = 2/178 (1%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
MSAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV V+G IVNLGLWD
Sbjct: 1 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
TAGQEDY+RLRPLSYRGAD+F+LAFSLISKASYENV KKW+PEL+ +AP VPI+LVGTKL
Sbjct: 61 TAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKL 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
DLRDDK + DH IT+ QGEELRK I A AYIECSSKTQ+NVKAVFD AI+VVL
Sbjct: 121 DLRDDKGYLADHTNV--ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 176
>AT3G51290.2 | Symbols: | Protein of unknown function (DUF630)
;Protein of unknown function (DUF632) |
chr3:19039980-19044215 FORWARD LENGTH=798
Length = 798
Score = 297 bits (761), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 143/164 (87%), Positives = 144/164 (87%)
Query: 34 DYVPTVFDNFSANVVVNGSIVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 93
DYVPTVFDNFSANVVVNGS VNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY
Sbjct: 635 DYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 694
Query: 94 ENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAP 153
ENVSKKWIPELKHYAPGVPI+LVGTKLDLRDDKQF IDHPGAVPITTAQGEELRK I AP
Sbjct: 695 ENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAP 754
Query: 154 AYIECSSKTQENVKAVFDAAIRVVLXXXXXXXXXXXXXXXCSIL 197
YIECSSKTQENVKAVFDAAIRVVL CSIL
Sbjct: 755 TYIECSSKTQENVKAVFDAAIRVVLQPPKQKKKKSKAQKACSIL 798
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-like 9
| chr2:18429276-18430636 FORWARD LENGTH=209
Length = 209
Score = 289 bits (740), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 140/192 (72%), Positives = 157/192 (81%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWDTAGQE 65
FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF+ANV+V+G VNLGLWDTAGQE
Sbjct: 18 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQE 77
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDD 125
DYNR+RPLSYRGADVFILAFSLIS+ S+EN++KKW+PEL+HYAP VPI+LVGTK DLRD+
Sbjct: 78 DYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTKSDLRDN 137
Query: 126 KQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVLXXXXXXX 185
QF ++PGA I QG+ELRK I A AYIECSSK Q NVKAVFD AI+VVL
Sbjct: 138 MQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKVVLHPPSKTK 197
Query: 186 XXXXXXXXCSIL 197
C +L
Sbjct: 198 KRKRKIGLCHVL 209
>AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-binding
family protein | chr3:20318597-20320737 FORWARD
LENGTH=193
Length = 193
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGSIVNLGLWDTAGQ 64
+K V +GD VGK+C+++ + F TV +F + + + + V +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E Y+ L PL YRGA V ++ + + S S++ ++ W+ EL KH +P + + LVG K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFD 171
+ ++ + T G EL + N +IE S+KT +N+ +F+
Sbjct: 153 EKRE----------VPTEDGMELAEK-NGMFFIETSAKTADNINQLFE 189
>AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ K+ AVP TA+G+ L + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ K+ AVP TA+G+ L + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | RAB
GTPase homolog 8A | chr3:16917908-16919740 FORWARD
LENGTH=216
Length = 216
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ K+ AVP TA+G+ L + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-related
small GTP-binding family protein |
chr3:20318597-20320782 FORWARD LENGTH=202
Length = 202
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGSIVNLGLWDTAGQ 64
+K V +GD VGK+C+++ + F TV +F + + + + V +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E Y+ L PL YRGA V ++ + + S S++ ++ W+ EL KH +P + + LVG K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFD 171
+ ++ + T G EL + N +IE S+KT +N+ +F+
Sbjct: 153 EKRE----------VPTEDGMELAEK-NGMFFIETSAKTADNINQLFE 189
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RAB homolog 1 |
chr5:18244495-18246060 FORWARD LENGTH=200
Length = 200
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQED 66
K V +GD GK+ L++ + + F T+ F S + VN + V +WDTAGQE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDD 125
Y+ L P+ YRGA I+ F + ++AS+E +KKW+ EL+ P + + L G K DL D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFER-AKKWVQELQAQGNPNMVMALAGNKADLLDA 130
Query: 126 KQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
++ +A+ E+ N+ ++E S+KT NVK +F
Sbjct: 131 RK-----------VSAEEAEIYAQENSLFFMETSAKTATNVKDIF 164
>AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ K+ AVP ++G+ L + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMK-FFETSAKTNLNVEEVF 170
>AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ K+ AVP ++G+ L + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMK-FFETSAKTNLNVEEVF 170
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTPase
homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ K+ AVP ++G+ L + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMK-FFETSAKTNLNVEEVF 170
>AT5G59840.1 | Symbols: | Ras-related small GTP-binding family
protein | chr5:24107450-24109049 REVERSE LENGTH=216
Length = 216
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ K+ AVP + Q I + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVPKSKGQALADEYGIK---FFETSAKTNLNVEEVF 170
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding
family protein | chr4:10687441-10689449 REVERSE
LENGTH=200
Length = 200
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQED 66
K V +GD GK+ L++ + + F T+ F S + VN + V +WDTAGQE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDD 125
Y+ L P+ YRGA I+ F + ++AS+E +KKW+ EL+ P + + L G K DL D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSDLLDA 130
Query: 126 KQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
++ TA+ + N ++E S+KT NVK +F
Sbjct: 131 RK-----------VTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5
| RAS 5 | chr1:400350-401788 REVERSE LENGTH=203
Length = 203
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K + +GD VGK+CLL+ ++ +++ Y+ T+ +F V +G + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLR 123
E + + YRGA I+ + + + S+ NV K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKSDLT 126
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDA 172
+++ A+P TA+ I P ++E S+K NV+ F A
Sbjct: 127 ENR--------AIPYETAKA--FADEIGIP-FMETSAKDATNVEQAFMA 164
>AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog
A1B | chr1:5787489-5789147 REVERSE LENGTH=216
Length = 216
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ + V+G +V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E Y + YRGA +L + + +A++ENV +W+ ELK H P + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENVD-RWLKELKNHTDPNIVVMLVGNKSDLR 131
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
H AVP T G+ + + ++E S+ NV+ F
Sbjct: 132 --------HLLAVP--TEDGKSYAEQ-ESLCFMETSALEATNVEDAF 167
>AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 15/176 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSI-VNLGLWDTAGQ 64
K + +GD VGK+ LL+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDL 122
E + L YRGA I+ + + + ++ N+S W E+ Y+ I LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 RDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
++ ++ +G + + ++ECS+KT+ NV+ F+ + +L
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELVLKIL 176
>AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 15/176 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSI-VNLGLWDTAGQ 64
K + +GD VGK+ LL+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDL 122
E + L YRGA I+ + + + ++ N+S W E+ Y+ I LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 RDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
++ ++ +G + + ++ECS+KT+ NV+ F+ + +L
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELVLKIL 176
>AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 15/176 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSI-VNLGLWDTAGQ 64
K + +GD VGK+ LL+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDL 122
E + L YRGA I+ + + + ++ N+S W E+ Y+ I LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 RDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
++ ++ +G + + ++ECS+KT+ NV+ F+ + +L
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELVLKIL 176
>AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E |
chr4:10183903-10185223 REVERSE LENGTH=217
Length = 217
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ V V+ I+ LWDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E Y + YRGA +L + + ++ENV ++W+ EL+ H V I+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDITRHITFENV-ERWLKELRDHTDANVVIMLVGNKADLR 131
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
H AVP A+ R+ + ++E S+ NV+ F
Sbjct: 132 --------HLRAVPTEEARSFSERENM---FFMETSALDATNVEQAF 167
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related
small GTP-binding family protein |
chr2:18411778-18413883 REVERSE LENGTH=208
Length = 208
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSIVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + + V L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDD 125
+ L P R + V ++ + + S+ S+ N + KWI E++ V ++LVG K DL D
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNTT-KWIDEVRTERGSDVIVVLVGNKTDLVDK 129
Query: 126 KQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+Q I+ A+ EL + +IE S+K N+KA+F
Sbjct: 130 RQVSIEEA------EAKARELNVM-----FIETSAKAGFNIKALF 163
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988839 REVERSE LENGTH=211
Length = 211
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 91/172 (52%), Gaps = 14/172 (8%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLW 59
MS K + +GD VGK+CLL+ +T F + T+ F A +V V+G + L +W
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGT 118
DTAGQE + + YRGA +L + + + ++ +++ W+ + + +A P + I+L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANPNMSIMLIGN 119
Query: 119 KLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
K DL + ++ +G++ K + ++E S++T +NV+ F
Sbjct: 120 KCDLAHKR----------AVSKEEGQQFAKE-HGLLFLEASARTAQNVEEAF 160
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RAB GTPase homolog C2A | chr5:885741-887061
REVERSE LENGTH=210
Length = 210
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVNGSIVNLGLWDTAGQED 66
K + +GD VGK+ LL+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLVSFISSSVE-DLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQER 73
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDLRD 124
+ L YRGA IL + + + ++ N+ W E++ Y+ + LVG K+D
Sbjct: 74 FRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRES 133
Query: 125 DKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFD 171
++ ++ +G L K +N ++ECS++T++NV+ F+
Sbjct: 134 ER----------GVSREEGIALAKELNC-MFLECSARTRQNVEQCFE 169
>AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A |
chr1:27687033-27687987 FORWARD LENGTH=233
Length = 233
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVNGSIVNLGLWDTAGQ 64
K V +GD AVGK+ LL ++ + F D PT+ F+ NV V I+ +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR 123
E + + YRGA +L + + + +++N+ KKW+ EL+ +A P ++LVG K DLR
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRTTFDNI-KKWLFELRDFANPETVVVLVGNKSDLR 131
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
++ D T A+ E L ++E S+ NV+ F
Sbjct: 132 QSREVEEDEGK----TLAESEGL-------YFLETSALENVNVEEAF 167
>AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C |
chr4:18506112-18507459 FORWARD LENGTH=214
Length = 214
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSIVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y PT+ D S + + V L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG---VPIILVGTKLDLR 123
+ L P R + V I+ + + ++ ++ N S KWI ++ H G V I+LVG K DL
Sbjct: 71 FRSLIPSYIRDSSVAIVVYDVSNRQTFLNTS-KWIEDV-HRERGQSNVIIVLVGNKTDLV 128
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ +Q I ++GE+ K +IE S+K N+KA+F
Sbjct: 129 EKRQVSI----------SEGEDKGKEYGV-MFIETSAKENFNIKALF 164
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C |
chr4:9644908-9646220 REVERSE LENGTH=211
Length = 211
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 91/172 (52%), Gaps = 14/172 (8%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLW 59
MS + K + +GD VGK+CLL+ +T F + T+ F A ++ ++ + L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGT 118
DTAGQE + + YRGA +L + + + ++ +++ W+ + + +A + I+L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGN 119
Query: 119 KLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
K DL + ++T +GE+ K + ++E S+KT +NV+ F
Sbjct: 120 KCDLAHRR----------AVSTEEGEQFAKE-HGLIFMEASAKTAQNVEEAF 160
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase
homolog 1C | chr4:9773721-9775424 REVERSE LENGTH=202
Length = 202
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K + +GD VGK+CLL+ + +++ Y+ T+ +F V +G + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR 123
E + + YRGA I+ + + S+ NV K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKCDLT 126
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDA 172
K ++T + + P ++E S+K NV+ F A
Sbjct: 127 SQK----------VVSTETAKAFADELGIP-FLETSAKNATNVEEAFMA 164
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 |
Ras-related small GTP-binding family protein |
chr1:1951089-1952686 REVERSE LENGTH=216
Length = 216
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ V G +V +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E Y + YRGA +L + + A++EN + +W+ EL+ H P + ++L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLR 131
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RABH1d
| RAB GTPase homolog H1D | chr2:9466568-9467688 FORWARD
LENGTH=207
Length = 207
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSIVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + + V L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIILVGTKLDLRDD 125
+ L P R + V ++ + + ++ S+ N S KWI E+++ G V I+LVG K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVVVYDVANRLSFLNTS-KWIEEVRNERAGDVIIVLVGNKTDLVEK 129
Query: 126 KQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+Q I+ ++G E +IE S+K N+K +F
Sbjct: 130 RQVSIEEG------DSKGREY-----GVMFIETSAKAGFNIKPLF 163
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB
GTPase homolog A1D | chr4:10320156-10321339 REVERSE
LENGTH=214
Length = 214
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ + VN ++ +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E Y + YRGA +L + + +++ENV ++W+ EL+ H P + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLRELRDHTDPNIVVMLVGNKSDLR 131
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small
GTP-binding family protein | chr3:3709490-3711397
REVERSE LENGTH=205
Length = 205
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K + +GD +VGK+CLL+ + + + Y+ T+ +F + +G + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR 123
E + + YRGA I+ + S+ NV K+W+ E+ YA V +L+G K D+
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDCTEMESFNNV-KQWLSEIDRYANESVCKLLIGNKNDMV 126
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ K ++T G L + P ++E S+K NV+ F
Sbjct: 127 ESK----------VVSTETGRALADELGIP-FLETSAKDSINVEQAF 162
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase
homolog E1E | chr3:3034687-3036379 FORWARD LENGTH=218
Length = 218
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +TF T ++ T+ +F V ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E + + YRGA +L + + ++S+ N+ + W+ + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ K+ AVP T++G+ L + E S+KT +NV+ VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNQNVEQVF 170
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase
homolog 1A | chr5:19167029-19168718 FORWARD LENGTH=202
Length = 202
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K + +GD VGK+CLL+ + +++ Y+ T+ +F V +G + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR 123
E + + YRGA I+ + + S+ NV K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKNDLT 126
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDA 172
K ++T + + P ++E S+K NV+ F A
Sbjct: 127 SQK----------VVSTETAKAFADELGIP-FLETSAKNATNVEEAFMA 164
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A,
RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE
LENGTH=217
Length = 217
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ + V G V +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR 123
E Y + YRGA +L + + ++ENVS +W+ EL+ +A + I+L+G K DL+
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVS-RWLKELRDHADSNIVIMLIGNKTDLK 130
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
H AV AQ ++ + ++IE S+ NV+ F
Sbjct: 131 --------HLRAVATEDAQSYAEKEGL---SFIETSALEALNVEKAF 166
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase
homolog B1A | chr4:9641980-9643541 REVERSE LENGTH=205
Length = 205
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLW 59
MS + K + +GD VGK+CLL+ +T F + T+ F A + ++ + L +W
Sbjct: 1 MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGT 118
DTAGQE + + YRG +L + + + ++ +++ W+ E + H + + +L+G
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLA-SWLEEARQHASENMTTMLIGN 119
Query: 119 KLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
K DL D + ++T +GE+ + + ++E S+KT NV+ F
Sbjct: 120 KCDLEDKR----------TVSTEEGEQFARE-HGLIFMEASAKTAHNVEEAF 160
>AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G |
chr3:5069239-5070025 FORWARD LENGTH=217
Length = 217
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQED 66
K V +GD VGK+ LL +T N F + T+ F+ + V+ IV +WDTAGQE
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
Y + YRGA +L + + ++ENV ++W+ EL+ H + I+LVG K DLR
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTEANIVIMLVGNKADLR 131
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883679-885158 FORWARD
LENGTH=216
Length = 216
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +TF T ++ T+ +F V ++G + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLR 123
E + + YRGA +L + + ++S+ N+ + W+ + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ K+ AVP TA+G+ L + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVENVF 170
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D |
chr3:3879495-3880437 REVERSE LENGTH=222
Length = 222
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQED 66
K V +GD AVGKT LL + N F D T+ F + +V++ V +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQER 76
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDD 125
Y + YRGA +L + + + S+++++ KW+ EL+ H + I+L+G K DL
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA-KWLEELRGHADKNIVIMLIGNKCDLGSL 135
Query: 126 KQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+ AVP AQ R+ + ++E S+ NV+ F
Sbjct: 136 R--------AVPTEDAQEFAQRENL---FFMETSALEATNVETAF 169
>AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D |
chr2:13473781-13474957 REVERSE LENGTH=219
Length = 219
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
K V +GD AVGK+ LL Y N F T+ F + N+ + G V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E + + YRGA ++ + + ++++E+V +W+ ELK H V +LVG K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDISRRSTFESVG-RWLDELKTHSDTTVARMLVGNKCDLE 130
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIR 175
+ ++ A+ T ++E S+ NVK F+ IR
Sbjct: 131 SIRAVSVEEGKALAET-----------EGLFFMETSALDSTNVKTAFEMVIR 171
>AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C |
chr5:18559318-18560639 FORWARD LENGTH=216
Length = 216
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ + V+ ++ +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E Y + YRGA +L + + +++ENV + W+ EL+ H P + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ETWLKELRNHTDPNIVVMLVGNKSDLR 131
>AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F |
chr5:24484750-24485565 FORWARD LENGTH=217
Length = 217
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ + V+ IV +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E Y + YRGA +L + + ++ENV ++W+ EL+ H + I+ VG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMFVGNKADLR 131
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
H AV A+ R+ ++E S+ NV+ F
Sbjct: 132 --------HLRAVSTEDAKAFAERE---NTFFMETSALESMNVENAF 167
>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
RAB GTPase homolog G3F | chr3:6484266-6486005 FORWARD
LENGTH=206
Length = 206
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAP----GVPIILVGTK 119
E + L YRGAD +L + + S S+EN++ W E L +P P +L+G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFENLN-NWREEFLIQASPSDPENFPFVLIGNK 126
Query: 120 LDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
+D+ D + A ++G N P Y E S+K NV+ F + L
Sbjct: 127 VDVDDGNSRVVSEKKAKAWCASKG-------NIP-YFETSAKVGTNVEEAFQCIAKDAL 177
>AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B |
chr1:6265416-6266659 REVERSE LENGTH=229
Length = 229
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVNGSIVNLGLWDTAGQ 64
K V +GD AVGK+ LL ++ + F D PT+ +F+ NV V + +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHY-APGVPIILVGTKLDLR 123
E + + YRGA +L + + + +++N+ +KW+ EL+ + +P ++LVG K DL
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRITFKNI-EKWLSELRGFSSPETVVVLVGNKSDLG 131
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPA--YIECSSKTQENVKAVFDAAI 174
++ + EE + L + ++E S+ +NV+ F + I
Sbjct: 132 QSRE-------------VEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMI 171
>AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I |
chr1:10036966-10037698 REVERSE LENGTH=218
Length = 218
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGSIVNLGLWDTAGQ 64
K V GD VGK+ LL +T N F D T+ F+ ++ + IV +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E Y + YRGA +L + + ++ENV ++W+ EL+ H + I+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 131
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
P-loop containing nucleoside triphosphate hydrolases
superfamily protein | chr2:17929899-17930904 REVERSE
LENGTH=214
Length = 214
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
K V +GD AVGK+ LL Y N F + T+ F + +++++G V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E + + YRGA ++ + + +++ENV +W+ EL H V +L+G K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDITRSSTFENVG-RWLDELNTHSDTTVAKMLIGNKCDLE 130
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVV 177
+ ++ ++ A+ E L ++E S+ NVK F+ IR +
Sbjct: 131 SIRAVSVEEGKSL----AESEGL-------FFMETSALDSTNVKTAFEMVIREI 173
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB
GTPase homolog A5E | chr1:1748314-1749350 FORWARD
LENGTH=261
Length = 261
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
K V +GD AVGK+ LL Y N F + T+ F + ++ + G V +WDTAGQ
Sbjct: 55 LFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQ 114
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E + + YRGA ++ + + + ++E+V +W+ ELK H V +LVG K DL
Sbjct: 115 ERFRAVTSAYYRGAVGALVVYDITRRTTFESVG-RWLDELKIHSDTTVARMLVGNKCDLE 173
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAI 174
+ + ++ A+ A+ E L ++E S+ NVK F+ I
Sbjct: 174 NIRAVSVEEGKAL----AEEEGL-------FFVETSALDSTNVKTAFEMVI 213
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase
homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
Length = 237
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQED 66
K V +GD AVGKT LL +T N F D T+ F + + G +V +WDTAGQE
Sbjct: 30 KVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQER 89
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII-LVGTKLDL 122
Y + YRGA ++ + + + S+++V+ +W+ EL+ +A +I LVG K DL
Sbjct: 90 YRAVTSAYYRGALGAMVVYDITKRLSFDHVA-RWVEELRAHADDSAVIMLVGNKADL 145
>AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B |
chr3:2372485-2373482 REVERSE LENGTH=217
Length = 217
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 14/175 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD AVGK+ LL ++ + F T+ T+ F +V + G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
E + + YRGA ++ + + ++E+V K+W+ EL H V +LVG K DL
Sbjct: 72 ERFRAVTSAYYRGAFGALIVYDITRGDTFESV-KRWLQELNTHCDTAVAQMLVGNKCDLE 130
Query: 124 DDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
D + ++ A+ A+ E L ++E S+ NV F+ IR +
Sbjct: 131 DIRAVSVEEGKAL----AEEEGL-------FFMETSALDATNVDKAFEIVIREIF 174
>AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H |
chr2:14337366-14338251 REVERSE LENGTH=218
Length = 218
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGSIVNLGLWDTAGQ 64
K V GD VGK+ LL +T N F D T+ F+ ++ V+ IV +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDL 122
E Y + YRGA +L + + ++ENV ++W+ EL+ H I+LVG K DL
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANTVIMLVGNKADL 130
>AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E |
chr5:3219991-3221301 FORWARD LENGTH=207
Length = 207
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSIVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + + V L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDD 125
+ L P R + V ++ + + ++ S+ N S KWI +++ V I+LVG K DL D
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTS-KWIEDVRTERGSDVIIVLVGNKTDLVDK 129
Query: 126 KQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+Q I+ +G+ + +IE S+K N+K +F
Sbjct: 130 RQVSIE----------EGDNKARDYGV-IFIETSAKAGFNIKPLF 163
>AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=206
Length = 206
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSIVNLGLWDTAGQED 66
K V +GD VGKT ++ + F T Y T+ D S L LWDTAGQE
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQER 68
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDD 125
+ L P R + V ++ + + SK S+ N S KWI E++ V I+LVG K DL +
Sbjct: 69 FKSLVPSYIRDSSVAVIVYDVASKQSFINTS-KWIEEVRAERGSYVIIVLVGNKTDLVNK 127
Query: 126 KQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+Q I+ +GE + A ++E S+K N+K +F
Sbjct: 128 RQVSIE----------EGENKAREFGA-LFMETSAKAGFNIKPLF 161
>AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A |
chr5:19277596-19278366 REVERSE LENGTH=221
Length = 221
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWD 60
S K V +GD AVGK+ LL + + F + T+ F + +NG + +WD
Sbjct: 10 SEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWD 69
Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTK 119
TAGQE + + YRGA +L + + + ++ ++ +W+ EL H V ILVG K
Sbjct: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIG-RWLNELHTHSDMNVVTILVGNK 128
Query: 120 LDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVV 177
DL+D ++ ++TA+G+ L + ++E S+ NV A F+ ++ +
Sbjct: 129 SDLKDLRE----------VSTAEGKALAE-AQGLFFMETSALDSSNVAAAFETVVKEI 175
>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPase
homolog G3B | chr1:8049247-8050494 FORWARD LENGTH=203
Length = 203
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLG 57
MS R +K + +GD VGKT L+ Y +N F Y T+ +F + + ++ +V L
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAP----GVP 112
+WDTAGQE + L YRGAD +L + + S+E++ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLD-NWHNEFLTRASPRDPMAFP 119
Query: 113 IILVGTKLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDA 172
IL+G K+D ID + ++ + E Y E S+K NV F
Sbjct: 120 FILLGNKVD--------IDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLC 171
Query: 173 AIRVVL 178
++ L
Sbjct: 172 ITKLAL 177
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB
GTPase homolog A4B | chr4:18542722-18543779 FORWARD
LENGTH=224
Length = 224
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQED 66
K V +GD AVGK+ LL + + F D T+ F + + + +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQER 78
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDD 125
Y + YRGA +L + + + ++E++ +W+ EL+ H + IIL+G K DL D
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDMTKRETFEHIP-RWLEELRAHADKNIVIILIGNKSDLEDQ 137
Query: 126 K 126
+
Sbjct: 138 R 138
>AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D |
chr1:19468150-19469449 REVERSE LENGTH=206
Length = 206
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLG 57
MS+ R +K + +GD VGKT L+ + + F Y T+ +F + V ++ I L
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAP----GVP 112
+WDTAGQE + L YRGAD +L + + S++N++ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLN-NWREEFLIQASPSDPENFP 119
Query: 113 IILVGTKLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFD 171
+++G K D+ K + A ++G N P Y E S+K NV A F+
Sbjct: 120 FVVLGNKTDVDGGKSRVVSEKKAKAWCASKG-------NIP-YFETSAKEGFNVDAAFE 170
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB
GTPase homolog A2B | chr1:2276270-2277154 FORWARD
LENGTH=214
Length = 214
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 122
E Y + YRGA +L + + + ++ENV +W+ EL+ +A + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENV-LRWLRELRDHADSNIVIMMAGNKSDL 129
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase
homolog A2D | chr5:23876858-23878244 FORWARD LENGTH=217
Length = 217
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD VGKT +L +T N F + T+ F+ + V G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 122
E Y + YRGA +L + + + +++NV +W+ EL+ +A + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMAGNKADL 129
>AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homolog
A4C | chr5:19421533-19422473 REVERSE LENGTH=223
Length = 223
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQED 66
K V +GD AVGK+ LL ++ N F + T+ F + ++ + +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQER 76
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDL 122
Y + YRGA +L + + + S+++V+ +W+ EL+ H + I+L+G K DL
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDITKRQSFDHVA-RWLEELRGHADKNIVIMLIGNKTDL 132
>AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A |
chr5:26083437-26084550 FORWARD LENGTH=226
Length = 226
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSAN-VVVNGSIVNLGLWDTAGQED 66
K V +GD AVGK+ +L Y + F D T+ F +V++ V +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQER 78
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDD 125
Y + YRGA +L + + + +++++ +W+ EL+ H + IIL+G K DL D
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDITRRQTFDHIP-RWLEELRAHADKNIVIILIGNKSDLVDQ 137
Query: 126 KQFCIDHPGAVPITTAQG-EELRKLINAPAYIECSSKTQENVKAVF 170
+ A+P A+ E L ++E S+ NV++ F
Sbjct: 138 R--------AIPTEDAKEFAEKEGLF----FLETSAFNATNVESAF 171
>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase
homolog G3C | chr3:5459270-5460556 FORWARD LENGTH=206
Length = 206
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLG 57
M++ R +K + +GD VGKT L+ + + F Y T+ +F + V ++ I L
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAP----GVP 112
+WDTAGQE + L YRGAD +L + S+EN++ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLN-NWREEFLIQASPSDPENFP 119
Query: 113 IILVGTKLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDA 172
+++G K D+ K + A ++G N P Y E S+K NV A F+
Sbjct: 120 FVVLGNKTDVDGGKSRVVTEKKAKSWCASKG-------NIP-YFETSAKDGVNVDAAFEC 171
Query: 173 AIRVVL 178
+ L
Sbjct: 172 IAKNAL 177
>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homolog
7A | chr2:9324899-9326170 REVERSE LENGTH=212
Length = 212
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y F Y T+ +F + + ++ V L +WDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQ 68
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP----GVPIILVGTKL 120
E + L YRGAD +L + + + S+E ++ LK P P +L+G K
Sbjct: 69 ERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLIGNKT 128
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
D+ + + A+ ++G N P Y E S+K N+ F + + L
Sbjct: 129 DVDGGNSRVVSNKRAIEWCGSKG-------NIP-YHETSAKEDTNIDEAFLSVAHIAL 178
>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAP----GVPIILVGTK 119
E + L YRGAD +L + + S S+E+++ W E L +P P +++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLN-NWREEFLIQASPSDPENFPFVVIGNK 126
Query: 120 LDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+D+ + A ++G N P Y E S+K NV+ F
Sbjct: 127 IDVDGGSSRVVSEKKARAWCASKG-------NIP-YYETSAKVGTNVEDAF 169
>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAP----GVPIILVGTK 119
E + L YRGAD +L + + S S+E+++ W E L +P P +++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLN-NWREEFLIQASPSDPENFPFVVIGNK 126
Query: 120 LDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+D+ + A ++G N P Y E S+K NV+ F
Sbjct: 127 IDVDGGSSRVVSEKKARAWCASKG-------NIP-YYETSAKVGTNVEDAF 169
>AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=206
Length = 206
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y F Y T+ +F + + + +V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAPG----VPIILVGTK 119
E + L YRGAD L + + S++N+ + W E LK +P P I++G K
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQASPSDPKTFPFIVLGNK 126
Query: 120 LDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
+D+ + A + G N P Y E S+K NV F
Sbjct: 127 IDVDGGSSRVVSDKKAADWCASNG-------NIP-YFETSAKDDFNVDEAF 169
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C,
RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362
REVERSE LENGTH=217
Length = 217
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSIVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V G + +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 122
E Y + YRGA +L + + + +++NV +W+ EL+ +A + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNV-LRWLRELRDHADSNIVIMMAGNKSDL 129
>AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWDTAGQED 66
++ V VGD GK+ L+++ +++FP + VP V ++ + + + + DT+ + +
Sbjct: 18 VRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTSSRPE 76
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK 126
+ + AD +L ++ + E +S+ W+PEL+ +PII+ G KLD RDD
Sbjct: 77 DRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDFRDDN 136
Query: 127 QFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
V + +++ IECS+ Q + VF A + VL
Sbjct: 137 -------NQVSLEQVMSPIMQQFREIETCIECSALKQLQAQEVFYYAQKTVL 181
>AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWDTAGQED 66
++ V VGD GK+ L+++ +++FP + VP V ++ + + + + DT+ + +
Sbjct: 18 VRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTSSRPE 76
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK 126
+ + AD +L ++ + E +S+ W+PEL+ +PII+ G KLD RDD
Sbjct: 77 DRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDFRDDN 136
Query: 127 QFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
V + +++ IECS+ Q + VF A + VL
Sbjct: 137 -------NQVSLEQVMSPIMQQFREIETCIECSALKQLQAQEVFYYAQKTVL 181
>AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVNGSIVNLGLWDTAGQED 66
K + +GD VGK+ LL+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDLRD 124
+ L +RG+ IL + + + ++ N++ W E++ Y+ I LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 125 DKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFD 171
+++ ++ +G L K +N + ECS++T+ENV F+
Sbjct: 134 ERK----------VSREEGMALAKDLNC-LFHECSARTRENVNGCFE 169
>AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVNGSIVNLGLWDTAGQED 66
K + +GD VGK+ LL+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDLRD 124
+ L +RG+ IL + + + ++ N++ W E++ Y+ I LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 125 DKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFD 171
+++ ++ +G L K +N + ECS++T+ENV F+
Sbjct: 134 ERK----------VSREEGMALAKDLNC-LFHECSARTRENVNGCFE 169
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase
homolog C2B | chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVNGSIVNLGLWDTAGQED 66
K + +GD VGK+ LL+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 67 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDLRD 124
+ L +RG+ IL + + + ++ N++ W E++ Y+ I LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 125 DKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFD 171
+++ ++ +G L K +N + ECS++T+ENV F+
Sbjct: 134 ERK----------VSREEGMALAKDLNC-LFHECSARTRENVNGCFE 169
>AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=213
Length = 213
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSIVNLGLW------- 59
K V +GD VGKT ++ + F T Y T+ D S L LW
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSLG 68
Query: 60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGT 118
DTAGQE + L P R + V ++ + + SK S+ N S KWI E++ V I+LVG
Sbjct: 69 DTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINTS-KWIEEVRAERGSYVIIVLVGN 127
Query: 119 KLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
K DL + +Q I+ +GE + A ++E S+K N+K +F
Sbjct: 128 KTDLVNKRQVSIE----------EGENKAREFGA-LFMETSAKAGFNIKPLF 168
>AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protein 4
| chr5:22351576-22353058 REVERSE LENGTH=222
Length = 222
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSIVNLGLWDTAGQE 65
K + VGDG GKT L + + F + PT+ D + + N + WDTAGQE
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDL 122
Y+ L+ Y I+ F + ++ +Y N+ +W +L+ +PI+L G K+D+
Sbjct: 74 KYSGLKDAYYIHGQCAIIMFDVTARHTYMNID-RWYRDLRRVCKNIPIVLCGNKVDV 129
>AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=211
Length = 211
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y F Y T+ +F + + + +V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGV----------PII 114
E + L YRGAD L + + S++N+ + W E A + P I
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQAWNIGMCPSDPKTFPFI 126
Query: 115 LVGTKLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
++G K+D+ + A + G N P Y E S+K NV F
Sbjct: 127 VLGNKIDVDGGSSRVVSDKKAADWCASNG-------NIP-YFETSAKDDFNVDEAF 174
>AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 |
chr3:23329200-23332692 REVERSE LENGTH=643
Length = 643
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWDTAGQED 66
++ GD GK+ L+ + S TFP D VP V + + + + DT D
Sbjct: 15 LRVAVAGDKGTGKSSLISAVASETFP-DNVPRVLPPITLPADAFPDYIPITIVDTPSSID 73
Query: 67 YNRLRPLS-YRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDD 125
NR++ + +R ADV +L ++ ++ + +S W+PEL+ P+I+VG KLDLRD+
Sbjct: 74 -NRIKLIEEFRKADVVLLTYACDQPSTLDRLSSYWLPELRRLEIKAPVIVVGCKLDLRDE 132
Query: 126 KQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
+ PI +E R++ IECS+ T V VF A + VL
Sbjct: 133 RSPARLEDIMSPIM----KEYREIETC---IECSALTLIQVPDVFYFASKAVL 178
>AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=217
Length = 217
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y F Y T+ +F + + + +V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGV------------- 111
E + L YRGAD L + + S++N+ + W E A +
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQAWNIGMWTIAEASPSDP 126
Query: 112 ---PIILVGTKLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKA 168
P I++G K+D+ + A + G N P Y E S+K NV
Sbjct: 127 KTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNG-------NIP-YFETSAKDDFNVDE 178
Query: 169 VF 170
F
Sbjct: 179 AF 180
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 |
chr5:22392285-22393957 FORWARD LENGTH=221
Length = 221
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSIVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + N + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRD 124
+ LR Y I+ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear
protein 2 | chr5:6762817-6764381 FORWARD LENGTH=221
Length = 221
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSIVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + N + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRD 124
+ LR Y I+ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear
protein-1 | chr5:6760364-6761747 FORWARD LENGTH=221
Length = 221
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSIVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + N + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRD 124
+ LR Y I+ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883713-885158 FORWARD
LENGTH=206
Length = 206
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 47 VVVNGSIVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-K 105
V ++G + L +WDTAGQE + + YRGA +L + + ++S+ N+ + W+ + +
Sbjct: 47 VELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQ 105
Query: 106 HYAPGVPIILVGTKLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQEN 165
H + V ILVG K D+ + K+ AVP TA+G+ L + E S+KT N
Sbjct: 106 HASDNVNKILVGNKADMDESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLN 155
Query: 166 VKAVF 170
V+ VF
Sbjct: 156 VENVF 160
>AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 |
chr5:15864166-15865782 REVERSE LENGTH=204
Length = 204
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVF-DNFSANVVVNGSIVNLGLWDTAGQE 65
+K + +GD VGKT LL Y F + T++ D + + + V L +WDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 66 DYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAPGV----PIILVGTKL 120
+ L YR D +L + + + ++E++ W E +K P P +L+G K
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESID-NWHDEFIKQANPETPTKFPFVLMGNKT 124
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVF 170
D+ + K + A ++G Y E S+K + NV+ F
Sbjct: 125 DVNNGKPRVVAKEIADQWCGSKGN--------IVYFETSAKAKINVEEAF 166
>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988587 REVERSE LENGTH=165
Length = 165
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 47 VVVNGSIVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKH 106
V V+G + L +WDTAGQE + + YRGA +L + + + ++ +++ W+ + +
Sbjct: 2 VTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQ 60
Query: 107 YA-PGVPIILVGTKLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQEN 165
+A P + I+L+G K DL + ++ +G++ K + ++E S++T +N
Sbjct: 61 HANPNMSIMLIGNKCDLAHKR----------AVSKEEGQQFAKE-HGLLFLEASARTAQN 109
Query: 166 VKAVF 170
V+ F
Sbjct: 110 VEEAF 114
>AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133405-6134959 FORWARD LENGTH=172
Length = 172
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 15/142 (10%)
Query: 35 YVPTVFDNF-SANVVVNGSIVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 93
Y T+ +F + + + +V L +WDTAGQE + L YRGAD L + + S+
Sbjct: 3 YKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSF 62
Query: 94 ENVSKKWIPE-LKHYAPG----VPIILVGTKLDLRDDKQFCIDHPGAVPITTAQGEELRK 148
+N+ + W E LK +P P I++G K+D+ + A + G
Sbjct: 63 DNL-ETWHEEFLKQASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNG----- 116
Query: 149 LINAPAYIECSSKTQENVKAVF 170
N P Y E S+K NV F
Sbjct: 117 --NIP-YFETSAKDDFNVDEAF 135
>AT2G21880.2 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homolog
7A | chr2:9324899-9326170 REVERSE LENGTH=204
Length = 204
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 21/178 (11%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSIVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y F Y T+ +F + + ++ V L
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTL-------- 60
Query: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP----GVPIILVGTKL 120
+ + L YRGAD +L + + + S+E ++ LK P P +L+G K
Sbjct: 61 QRFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLIGNKT 120
Query: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIRVVL 178
D+ + + A+ ++G N P Y E S+K N+ F + + L
Sbjct: 121 DVDGGNSRVVSNKRAIEWCGSKG-------NIP-YHETSAKEDTNIDEAFLSVAHIAL 170
>AT3G05310.1 | Symbols: MIRO3 | MIRO-related GTP-ase 3 |
chr3:1510160-1513301 FORWARD LENGTH=648
Length = 648
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 30/183 (16%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTF--------PTDYVPTVF--DNFSANVVVNGSIVNL 56
I+ V VG+ GK+ L+++ NTF P +P+ F D A V+
Sbjct: 15 IRIVVVGEKGSGKSSLIMAAARNTFHPNIPSLLPYTNLPSEFFPDRIPATVI-------- 66
Query: 57 GLWDTAGQ-EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIIL 115
DT+ + ED ++ R AD +L F+ + + +SK W+P + VPII+
Sbjct: 67 ---DTSSRPEDKGKVVK-EVRQADAIVLTFAFDRPETLDRLSKYWLPLFRQLEVRVPIIV 122
Query: 116 VGTKLDLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKTQENVKAVFDAAIR 175
G ++D ++ +H IT+A ++ R++ + I+ S++ + K V A +
Sbjct: 123 AGYEVDNKE----AYNHFSIEQITSALMKQYREVETS---IQWSAQRLDQAKDVLYYAQK 175
Query: 176 VVL 178
V+
Sbjct: 176 AVI 178