Miyakogusa Predicted Gene
- Lj2g3v1670940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1670940.1 tr|G7JXL5|G7JXL5_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,72.97,0,seg,NULL; PPR,Pentatricopeptide repeat; PGR3
(PROTON GRADIENT REGULATION 3),NULL; FAMILY NOT NAMED,N,CUFF.37646.1
(614 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 457 e-128
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 8e-70
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 260 2e-69
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 250 3e-66
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 5e-62
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 4e-61
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 2e-60
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 4e-60
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 225 7e-59
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 224 1e-58
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 1e-57
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 220 2e-57
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 218 1e-56
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 211 1e-54
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 206 5e-53
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 205 8e-53
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 204 1e-52
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 204 2e-52
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 2e-52
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 202 5e-52
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 6e-52
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 201 1e-51
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 199 5e-51
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 1e-50
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 2e-50
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 195 7e-50
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 3e-49
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 4e-49
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 192 7e-49
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 5e-47
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 5e-47
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 6e-47
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 184 1e-46
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 3e-46
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 5e-46
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 1e-45
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 6e-45
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 2e-44
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 176 3e-44
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 4e-44
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 8e-44
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 1e-43
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 2e-43
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 4e-43
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 8e-43
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 172 8e-43
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 170 2e-42
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 3e-42
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 169 8e-42
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 8e-42
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 167 2e-41
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 167 2e-41
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 3e-41
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 6e-41
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 7e-41
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 165 8e-41
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 1e-40
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 7e-40
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 8e-40
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 9e-40
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 160 2e-39
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 8e-39
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 9e-39
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 158 1e-38
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 2e-38
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 4e-38
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 156 5e-38
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 155 1e-37
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 1e-37
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 3e-37
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 153 4e-37
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 4e-37
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 2e-36
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 150 2e-36
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 150 2e-36
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 3e-36
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 6e-36
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 7e-36
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 7e-36
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 4e-35
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 144 1e-34
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 3e-34
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 1e-33
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 4e-32
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 123 3e-28
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 8e-28
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 97 2e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 88 2e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 81 3e-15
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 80 4e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 9e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 75 1e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 70 6e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 65 2e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 64 2e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 9e-10
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 60 5e-09
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 60 6e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 59 7e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 8e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 53 5e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 52 9e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 50 4e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 306/482 (63%), Gaps = 27/482 (5%)
Query: 89 LLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFP 148
LL +S +T+ I+R +C N V AY S P A FYF LRF F P
Sbjct: 60 LLKSSSRFGDSSYTVSIYRSIGK---LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVP 116
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
+SYTFV LI T C+ SG+ CH Q IK+G D VLPVQNSL+HMY CG + +A+ LF
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLF 176
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
+ RD+ SWNS++ G + GD+ +AH LFD MPDKN+++WNIMIS +L A NPG ++
Sbjct: 177 VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSIS 236
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
LFREM G +GN +T+V ++ ACGRSARLKEGRSVH S+IR F SS+++DTALIDMY
Sbjct: 237 LFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYG 296
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV-GMDKVKGEVEID 387
KC+ V LA R+F+ ++ RN V+WN MIL HC+HG PE GL LF+ M+ GM
Sbjct: 297 KCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM---------- 346
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
L+PDEVTF+G+ G+SY+ M D F +KPNF H WCMAN
Sbjct: 347 -----------LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN 395
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
L ++AG +EAE+ L+N+ D D++ ES WANLL+ RF + LGE AK L++ P
Sbjct: 396 LYSSAGFPEEAEEALKNLP--DEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHE 567
N Y L+ IY+V +WE+V+ V++++KER++G IPG LVDLK IVH ++ K E
Sbjct: 454 LNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCKEAE 513
Query: 568 GI 569
+
Sbjct: 514 KV 515
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 255/489 (52%), Gaps = 33/489 (6%)
Query: 105 IFRYFNNPLDTFCVNTVISAYC---KSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCG 161
IF + L++F N +I A S H Y R R P+ +TF L+ S
Sbjct: 14 IFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFH 73
Query: 162 NTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNS 221
N + G++ HAQ++ G D V+ SL++MY+ CGD++ A+ +FD ++DL +WNS
Sbjct: 74 NPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNS 133
Query: 222 MVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREM-----GSV 276
+V+ Y +AG + A LFD MP++N+++W+ +I+G++ AL LFREM
Sbjct: 134 VVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEA 193
Query: 277 GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELA 336
++ N TM V++ACGR L++G+ VH I + ++L TALIDMY KC +E A
Sbjct: 194 FVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 337 TRVFERM-TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRG 395
RVF + + +++ +++AMI ++G ++ LF EM D +
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNI--------------- 298
Query: 396 VVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLV 455
P+ VTF+GI G+SYFK M + FG+ P+ H CM +L +GL+
Sbjct: 299 ----NPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLI 354
Query: 456 DEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQF 515
EAE + +M M + ++W +LL+ R D+ E K L+++ P N Y
Sbjct: 355 KEAESFIASMP-----MEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVL 409
Query: 516 LLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMM 575
L +YA +W V ++ M+ + + +PG S V+++ +VH F V ++ + E + M
Sbjct: 410 LSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAM 469
Query: 576 MDELARRFR 584
+DE+ +R R
Sbjct: 470 LDEIMQRLR 478
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 248/487 (50%), Gaps = 42/487 (8%)
Query: 116 FCVNTVISAYCKSHDPH--LAQVFYFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKC 172
F NT+I + +S + +A ++ + F PN +TF ++ +C TG I G++
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF-DSMLARDLAS------------- 218
H +K GF V ++L+ MY CG ++ ARVLF +++ +D+
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 219 WNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL 278
WN M+DGY+ GD +A LFD M +++V+WN MISG+ A+++FREM +
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATR 338
+ N T+V V+ A R L+ G +H R +L +ALIDMY KC +E A
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 339 VFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVR 398
VFER+ N+++W+AMI G IHG D + F +M GV
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-----------------RQAGV-- 371
Query: 399 LQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEA 458
+P +V +I + GR YF QM V GL+P H CM +LL +GL+DEA
Sbjct: 372 -RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 459 EKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLI 518
E+ + NM + + ++W LL CR + +V +G++ A +L+DM P + Y L
Sbjct: 431 EEFILNMP-----IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSN 485
Query: 519 IYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDE 578
+YA W VS ++ MKE+ + PG SL+D+ ++H F V + H + +N M+ E
Sbjct: 486 MYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVE 545
Query: 579 LARRFRM 585
++ + R+
Sbjct: 546 ISDKLRL 552
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 50/214 (23%)
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG--YA 266
D++ A ++ + + D L DL AH +F+ MP +N +WN +I GF ++ A
Sbjct: 54 DTLAAAEILRFCATSD--LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIA 111
Query: 267 LKLFREMGSVG-LKGNATTMVCVVTACGRSARLKEGRSVHG---------------SIIR 310
+ LF EM S ++ N T V+ AC ++ +++EG+ +HG +++R
Sbjct: 112 ITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVR 171
Query: 311 MF------------------------------SRSSLILDTALIDMYCKCRRVELATRVF 340
M+ ++L +ID Y + + A +F
Sbjct: 172 MYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLF 231
Query: 341 ERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
++M R++VSWN MI G+ ++G +D + +F EM
Sbjct: 232 DKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/505 (30%), Positives = 255/505 (50%), Gaps = 30/505 (5%)
Query: 81 RIPFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFR 140
R P L L ++ + +L +F +P D F I+ + A + Y +
Sbjct: 62 RYPVLNLKLHRAYASHGKIRHSLALFHQTIDP-DLFLFTAAINTASINGLKDQAFLLYVQ 120
Query: 141 SLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGD 200
L PN +TF L+ SC SG+ H V+K G V L+ +YA GD
Sbjct: 121 LLSSEINPNEFTFSSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGD 176
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKA 260
V A+ +FD M R L S +M+ Y + G++ +A ALFD M ++++V+WN+MI G+ +
Sbjct: 177 VVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQH 236
Query: 261 RNPGYALKLFREMGSVGL-KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
P AL LF+++ + G K + T+V ++AC + L+ GR +H + R ++ +
Sbjct: 237 GFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKV 296
Query: 320 DTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDK 379
T LIDMY KC +E A VF +++V+WNAMI G+ +HG +D L LF+EM
Sbjct: 297 CTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM----- 351
Query: 380 VKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNF 439
+G+ LQP ++TFIG G F+ M +G+KP
Sbjct: 352 --------------QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKI 397
Query: 440 AHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFA 499
H C+ +LL AG + A + ++NM +M +S+LW+++L C+ D LG++ A
Sbjct: 398 EHYGCLVSLLGRAGQLKRAYETIKNM-----NMDADSVLWSSVLGSCKLHGDFVLGKEIA 452
Query: 500 KLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNF 559
+ L+ + KN Y L IYA +E V+ V+ LMKE+ + PG S ++++ VH F
Sbjct: 453 EYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEF 512
Query: 560 KVSEKRHEGIEAVNMMMDELARRFR 584
+ ++ H + + M+ +++ R +
Sbjct: 513 RAGDREHSKSKEIYTMLRKISERIK 537
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 253/490 (51%), Gaps = 28/490 (5%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
FL+ + S +S+ + + ++F F+ P DTF N +I + S +P + + Y R L
Sbjct: 52 FLSFCISSTSSDF--LPYAQIVFDGFDRP-DTFLWNLMIRGFSCSDEPERSLLLYQRMLC 108
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV 203
N+YTF L+ +C N + HAQ+ K G+++ + NSLI+ YA G+ ++
Sbjct: 109 SSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKL 168
Query: 204 ARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP 263
A +LFD + D SWNS++ GY++AG + A LF M +KN ++W MISG+++A
Sbjct: 169 AHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMN 228
Query: 264 GYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTAL 323
AL+LF EM + ++ + ++ ++AC + L++G+ +H + + R +L L
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288
Query: 324 IDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGE 383
IDMY KC +E A VF+ + +++ +W A+I G+ HG + +S F EM M
Sbjct: 289 IDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG----- 343
Query: 384 VEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLW 443
++P+ +TF + G+ F M + LKP H
Sbjct: 344 ---------------IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG 388
Query: 444 CMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLV 503
C+ +LL AGL+DEA++ ++ M + +++W LL CR +++ LGE+ ++L+
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMP-----LKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
Query: 504 DMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSE 563
+ P + Y I+A+ +W+ + ++LMKE+ + +PG S + L+ H F +
Sbjct: 444 AIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGD 503
Query: 564 KRHEGIEAVN 573
+ H IE +
Sbjct: 504 RSHPEIEKIQ 513
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 253/499 (50%), Gaps = 29/499 (5%)
Query: 88 TLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF 147
+ ++ +NL G + IF NP + F N +I + +P A FY + L+ R +
Sbjct: 58 STFNKPTNLLGYAYG--IFSQIQNP-NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIW 114
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P++ TF LI + C++ G + H+Q+++ GF + + V+NSL+HMYA+CG + A +
Sbjct: 115 PDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRI 174
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F M RD+ SW SMV GY + G + +A +FD MP +NL TW+IMI+G+ K A+
Sbjct: 175 FGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAI 234
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
LF M G+ N T MV V+++C L+ G + +++ +LIL TAL+DM+
Sbjct: 235 DLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMF 294
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
+C +E A VFE + + +SW+++I G +HG + F +M+ + +
Sbjct: 295 WRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI------- 347
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
P +VTF + G ++ M G++P H C+ +
Sbjct: 348 -------------PRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
+L AG + EAE + M + + + LL C+ ++ + E+ +L+ + P
Sbjct: 395 MLGRAGKLAEAENFILKM-----HVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKP 449
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVS-EKRH 566
++ Y L IYA A QW+ + +++ +MKE+ + PG SL+++ ++ F + +++H
Sbjct: 450 EHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKH 509
Query: 567 EGIEAVNMMMDELARRFRM 585
+ + +E+ + R+
Sbjct: 510 PEMGKIRRKWEEILGKIRL 528
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 234/471 (49%), Gaps = 25/471 (5%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N +I+ Y K + A Y P+ T + L+ SC G + G++ +
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
V +NG +P+ N+L+ M++ CGD+ AR +FD++ R + SW +M+ GY G L
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+ LFD M +K++V WN MI G ++A+ AL LF+EM + K + TM+ ++AC
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
+ L G +H I + ++ L T+L+DMY KC + A VF + RN +++ A
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTA 460
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
+I G +HG +S F+EM+ D G+ PDE+TFIG+
Sbjct: 461 IIGGLALHGDASTAISYFNEMI-----------------DAGIA---PDEITFIGLLSAC 500
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
GR YF QM F L P H M +LL AGL++EA++ + +M M
Sbjct: 501 CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP-----ME 555
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQ 533
++ +W LL CR +V LGE+ AK L+++ P + Y L +Y A WE+ +
Sbjct: 556 ADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRAR 615
Query: 534 KLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
++M ER + IPG S +++ IV F V +K E + + L R R
Sbjct: 616 RMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 176/420 (41%), Gaps = 53/420 (12%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRF---RFFPNSYTFVP 155
+D+++ I + NP + F N I + +S +P + + Y + LR P+ +T+
Sbjct: 103 LDYSVKILKGIENP-NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPV 161
Query: 156 LIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARD 215
L C + G V+K + V V N+ IHM+A CGD++ AR +FD RD
Sbjct: 162 LFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRD 221
Query: 216 LASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGS 275
L SWN +++GY + G+ A+ +++ M S
Sbjct: 222 LVSWNCLINGYKKIGEAEK-------------------------------AIYVYKLMES 250
Query: 276 VGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVEL 335
G+K + TM+ +V++C L G+ + + R ++ L AL+DM+ KC +
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRG 395
A R+F+ + R +VSW MI G+ G + LFD+M D V I S A RG
Sbjct: 311 ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG 370
Query: 396 VVRL-----------QPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWC 444
L +PDE+T I G + + + + L N A
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG-IWIHRYIEKYSLSLNVALGTS 429
Query: 445 MANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVD 504
+ ++ A G + EA ++ F G +R S+ + ++ D + ++D
Sbjct: 430 LVDMYAKCGNISEA------LSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMID 483
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 238/493 (48%), Gaps = 66/493 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ YTF ++ +C +G IV GRK H K G S L V N L+ MY CG + AR++
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 208 FDSMLARDLASWNSMVDGYLE----------------------AGDLSS----------- 234
D M RD+ SWNS+V GY + AG ++S
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTE 257
Query: 235 ----AHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
+F M K+LV+WN+MI ++K P A++L+ M + G + +A ++ V+
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
ACG ++ L G+ +HG I R +L+L+ ALIDMY KC +E A VFE M +R++VS
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIX 410
W AMI + G D ++LF ++ D G+V PD + F+
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKL-----------------QDSGLV---PDSIAFVTTL 417
Query: 411 XXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDG 470
GRS FK MTD + + P HL CM +LL AG V EA + +++M+
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMS---- 473
Query: 471 DMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVS 530
M +W LL CR D +G A L + P+ Y L IYA A +WE V+
Sbjct: 474 -MEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVT 532
Query: 531 TVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR----MP 586
++ +MK + L PG+S V++ I+H F V ++ H + + +D L ++ + +P
Sbjct: 533 NIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVP 592
Query: 587 SVDSGQSSVRHKE 599
+S V ++
Sbjct: 593 DSESALHDVEEED 605
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 96/179 (53%), Gaps = 4/179 (2%)
Query: 200 DVQVARVLFDSMLARDLASWNSM----VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMIS 255
D++ R + ++ DL +S+ + Y D++SA +FD +P++N++ N+MI
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 256 GFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRS 315
++ G +K+F M ++ + T CV+ AC S + GR +HGS ++ S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 316 SLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+L + L+ MY KC + A V + M+ R++VSWN++++G+ + +D L + EM
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 35/259 (13%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N +I Y K+ P A Y R F P++ + ++ +CG+T + G+K H + +
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
L ++N+LI MYA CG ++ AR +F++M +RD+ SW +M+ Y +G A AL
Sbjct: 338 KKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
F + D LV ++ V + AC + L
Sbjct: 398 FSKLQDSGLVP-------------------------------DSIAFVTTLAACSHAGLL 426
Query: 299 KEGRSVHGSIIRMFSRSSLILDTA-LIDMYCKCRRVELATRVFERMT-NRNLVSWNAMIL 356
+EGRS + + + + A ++D+ + +V+ A R + M+ N W A+ L
Sbjct: 427 EEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGAL-L 485
Query: 357 GHC-IHGSPEDGLSLFDEM 374
G C +H + GL D++
Sbjct: 486 GACRVHSDTDIGLLAADKL 504
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 237/469 (50%), Gaps = 25/469 (5%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D F N +IS Y + + + R P S T + ++ +C ++ H
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
V + + L ++N+L++ YA CG++ +A +F SM ARD+ SW S+V GY+E G+L
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLK 319
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
A FD MP ++ ++W IMI G+L+A +L++FREM S G+ + TMV V+TAC
Sbjct: 320 LARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
L+ G + I + ++ +++ ALIDMY KC E A +VF M R+ +W A
Sbjct: 380 HLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTA 439
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
M++G +G ++ + +F +M M +QPD++T++G+
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMS--------------------IQPDDITYLGVLSAC 479
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
R +F +M ++P+ H CM ++L AGLV EA + LR M M+
Sbjct: 480 NHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP-----MN 534
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQ 533
S++W LL R D + E AK ++++ P N A Y L IYA +W+++ V+
Sbjct: 535 PNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVR 594
Query: 534 KLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARR 582
+ + + + PG SL+++ H F +K H E + M ++ELA+
Sbjct: 595 RKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQE 643
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 162/383 (42%), Gaps = 45/383 (11%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLI- 157
V + +F P D N +I + K Y L+ P+S+TF L+
Sbjct: 84 VSYAYKLFVKIPEP-DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN 142
Query: 158 GSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA 217
G + G + G+K H V+K G S L VQN+L+ MY+ CG + +AR +FD D+
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVF 202
Query: 218 SWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG 277
SWN M+ GY + + L M ++NLV+
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEM-ERNLVS---------------------------- 233
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELAT 337
+ T++ V++AC + + VH + + SL L+ AL++ Y C +++A
Sbjct: 234 --PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAV 291
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID---ESPCADR 394
R+F M R+++SW +++ G+ G+ + + FD+M D++ + ID + C +
Sbjct: 292 RIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNE 351
Query: 395 GV--------VRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
+ + PDE T + + G + K D +K + +
Sbjct: 352 SLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE-WIKTYIDKNKIKNDVVVGNALI 410
Query: 447 NLLANAGLVDEAEKCLRNMAKFD 469
++ G ++A+K +M + D
Sbjct: 411 DMYFKCGCSEKAQKVFHDMDQRD 433
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 244/489 (49%), Gaps = 28/489 (5%)
Query: 96 LCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVF-YFRSLRFRFFP--NSYT 152
LC + + IF F+ P +T V++AY S H + F +FR + R P N +
Sbjct: 70 LCNLSYARFIFDRFSFP-NTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFI 128
Query: 153 FVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYAD-CGDVQVARVLFDSM 211
+ ++ S S H + K+GF + VQ +L+H YA + +AR LFD M
Sbjct: 129 YPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEM 188
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
R++ SW +M+ GY +GD+S+A ALF+ MP++++ +WN +++ + A+ LFR
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 272 EM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKC 330
M ++ N T+VCV++AC ++ L+ + +H R S + + +L+D+Y KC
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC 308
Query: 331 RRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESP 390
+E A+ VF+ + ++L +WN+MI +HG E+ +++F+EM+ ++
Sbjct: 309 GNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLN------------ 356
Query: 391 CADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLA 450
+ ++PD +TFIG+ GR YF MT+ FG++P H C+ +LL
Sbjct: 357 -----INDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLG 411
Query: 451 NAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNL 510
AG DEA + + M M + +W +LL C+ + L E K LV + P N
Sbjct: 412 RAGRFDEALEVMSTM-----KMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNG 466
Query: 511 ACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIE 570
+ +Y WE +K++K + PG S +++ VH F +K H E
Sbjct: 467 GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETE 526
Query: 571 AVNMMMDEL 579
+ M++D L
Sbjct: 527 EIYMILDSL 535
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 150/495 (30%), Positives = 245/495 (49%), Gaps = 30/495 (6%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSL--RFRFFPNSYTFVPL 156
+++ L+F N+ + F NT+I + +S P +A + L P T+ +
Sbjct: 74 MNYAYLVFTRINHK-NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 157 IGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDL 216
+ G G GR+ H VIK G + ++N+++HMY CG + A +F M+ D+
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 217 ASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV 276
+WNSM+ G+ + G + A LFD MP +N V+WN MISGF++ AL +FREM
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 277 GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELA 336
+K + TMV ++ AC ++GR +H I+R + I+ TALIDMYCKC +E
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 337 TRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGV 396
VFE + L WN+MILG +G E + LF E+ +R
Sbjct: 313 LNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSEL------------------ERS- 353
Query: 397 VRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVD 456
L+PD V+FIG+ +F+ M + + ++P+ H M N+L AGL++
Sbjct: 354 -GLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLE 412
Query: 457 EAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFL 516
EAE ++NM + ++++W++LL+ CR +V + ++ AK L + P Y L
Sbjct: 413 EAEALIKNMP-----VEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLL 467
Query: 517 LIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMM 576
YA +E + LMKER++ G S +++ + VH F H + ++
Sbjct: 468 SNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLL 527
Query: 577 DELARRFRMPSVDSG 591
D L + + ++ SG
Sbjct: 528 DIL--NWDVSTIKSG 540
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 223/440 (50%), Gaps = 27/440 (6%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ + F L+ +C N G I GR+ H I + + + V++SL+ MYA CG + A+ +
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FDS+ ++ SW +MV GY ++G A LF ++P KNL +W +ISGF+++ A
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 268 KLFREMGSVGLKG-NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
+F EM + + + +V AC A GR VHG +I + S + + ALIDM
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDM 282
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y KC V A +F RM +R++VSW ++I+G HG E L+L+D+MV
Sbjct: 283 YAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMV----------- 331
Query: 387 DESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
GV +P+EVTF+G+ GR F+ MT +G++P+ H C+
Sbjct: 332 ------SHGV---KPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLL 382
Query: 447 NLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMY 506
+LL +GL+DEAE + M F D WA LL+ C+ + +G + A LV +
Sbjct: 383 DLLGRSGLLDEAENLIHTMP-FPPD----EPTWAALLSACKRQGRGQMGIRIADHLVSSF 437
Query: 507 P-KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKR 565
K+ + Y L IYA A+ W VS ++ + E + PG S V+++ F E
Sbjct: 438 KLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETS 497
Query: 566 HEGIEAVNMMMDELARRFRM 585
H E + ++ +L R+
Sbjct: 498 HPLKEDIFRLLKKLEEEMRI 517
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 36/215 (16%)
Query: 160 CGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASW 219
C + + + HA ++K G P+ N+L+++Y CG
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCG-------------------- 52
Query: 220 NSMVDGYLEAGDLSSAHAL--FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG 277
+++HAL FD MP ++ + W +++ +A G L +F +GS
Sbjct: 53 -------------AASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSS 99
Query: 278 -LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELA 336
L+ + +V AC + GR VH I + ++ ++L+DMY KC + A
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 337 TRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLF 371
VF+ + +N +SW AM+ G+ G E+ L LF
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 141/465 (30%), Positives = 244/465 (52%), Gaps = 42/465 (9%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DTF N ++S Y ++ + AQ F+ R F ++ ++ +I G + R+
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMP----FKDAASWNTMITGYARRGEMEKARELF 178
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+++ S N++I Y +CGD++ A F R + +W +M+ GY++A +
Sbjct: 179 YSMMEKNEVS----WNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 234 SAHALF-DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
A A+F D+ +KNLVTWN MISG+++ P LKLFR M G++ N++ + + C
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILD----TALIDMYCKCRRVELATRVFERMTNRNL 348
+ L+ GR +H ++ S+S+L D T+LI MYCKC + A ++FE M +++
Sbjct: 295 SELSALQLGRQIH----QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 350
Query: 349 VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIG 408
V+WNAMI G+ HG+ + L LF EM+ +++PD +TF+
Sbjct: 351 VAWNAMISGYAQHGNADKALCLFREMIDN--------------------KIRPDWITFVA 390
Query: 409 IXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKF 468
+ G +YF+ M + ++P H CM +LL AG ++EA K +R+M
Sbjct: 391 VLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP-- 448
Query: 469 DGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWEN 528
+ ++ LL CR ++V L E A+ L+ + +N A Y L IYA +WE+
Sbjct: 449 ---FRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWED 505
Query: 529 VSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVN 573
V+ V+K MKE + +PG S ++++ VH+F+ S++ H +++++
Sbjct: 506 VARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 14/222 (6%)
Query: 156 LIGSCGNTGCIVSG-RKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR 214
+I C +G I R H KN + + LI + D + A LFD +
Sbjct: 67 IIARCVRSGDIDGALRVFHGMRAKN----TITWNSLLIGISKDPSRMMEAHQLFDEIPEP 122
Query: 215 DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMG 274
D S+N M+ Y+ + A + FD MP K+ +WN MI+G+ + A +LF M
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM- 181
Query: 275 SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVE 334
++ N + +++ L++ ++ ++ TA+I Y K ++VE
Sbjct: 182 ---MEKNEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 335 LATRVFERMT-NRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
LA +F+ MT N+NLV+WNAMI G+ + PEDGL LF M+
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML 276
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 246/512 (48%), Gaps = 47/512 (9%)
Query: 86 ARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFY----FRS 141
+ LL R + + + +F + N TF N +I AY H PH + V Y F
Sbjct: 19 TKDLLQRLLLIPNLVYARKLFDHHQNSC-TFLYNKLIQAYYVHHQPHESIVLYNLLSFDG 77
Query: 142 LRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDV 201
LR P+ +TF + + + R H+Q ++GF+S +LI YA G +
Sbjct: 78 LR----PSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGAL 133
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKAR 261
AR +FD M RD+ WN+M+ GY GD+ +A LFD MP KN+ +W +ISGF +
Sbjct: 134 CCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNG 193
Query: 262 NPGYALKLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD 320
N ALK+F M +K N T+V V+ AC L+ GR + G ++R + D
Sbjct: 194 NYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG-----YARENGFFD 248
Query: 321 -----TALIDMYCKCRRVELATRVFERMTN-RNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
A I+MY KC +++A R+FE + N RNL SWN+MI HG ++ L+LF +M
Sbjct: 249 NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM 308
Query: 375 VGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFG 434
+ +GE +PD VTF+G+ G+ FK M +V
Sbjct: 309 LR----EGE----------------KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHK 348
Query: 435 LKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYL 494
+ P H CM +LL G + EA ++ M M ++++W LL C F +V +
Sbjct: 349 ISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMP-----MKPDAVVWGTLLGACSFHGNVEI 403
Query: 495 GEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPG-SSLVDLK 553
E ++ L + P N + IYA +W+ V ++KLMK+ + G S V++
Sbjct: 404 AEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVG 463
Query: 554 YIVHNFKVSEKRHEGIEAVNMMMDELARRFRM 585
VH F V +K H + +++E+ RR ++
Sbjct: 464 VDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 495
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 244/485 (50%), Gaps = 33/485 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKC 172
D N++IS + + A + + LR P+ +T ++ +C N + G++
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA--SWNSMVDGYLEAG 230
H+ ++ GFD V N+LI MY+ CG V+ AR L + +DL + +++DGY++ G
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361
Query: 231 DLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
D++ A +F + D+++V W MI G+ + + G A+ LFR M G + N+ T+ +++
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM-TNRNLV 349
A L G+ +HGS ++ S+ + ALI MY K + A+R F+ + R+ V
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 350 SWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGI 409
SW +MI+ HG E+ L LF+ M+ ++G L+PD +T++G+
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETML----MEG----------------LRPDHITYVGV 521
Query: 410 XXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFD 469
GR YF M DV + P +H CM +L AGL+ EA++ + M
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP--- 578
Query: 470 GDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENV 529
+ + + W +LL+ CR +++ LG+ A+ L+ + P+N Y L +Y+ +WE
Sbjct: 579 --IEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEA 636
Query: 530 STVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMM----DELARRFRM 585
+ ++K MK+ R+ G S +++K+ VH F V + H + M M DE+ + +
Sbjct: 637 AKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYV 696
Query: 586 PSVDS 590
P S
Sbjct: 697 PDTAS 701
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 163/331 (49%), Gaps = 37/331 (11%)
Query: 81 RIPFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFR 140
R F T+LS S +D T F D+ T+I Y H A
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR-DSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 141 SLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGD 200
++ P +T ++ S T C+ +G+K H+ ++K G + V NSL++MYA CGD
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKA 260
+A+ +FD M+ RD++SWN+M+ +++ G + A A F+ M ++++VTWN MISGF +
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 261 RNPGYALKLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLI 318
AL +F +M L + T+ V++AC +L G+ +H I+ F S ++
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 319 LDTALIDMYCKCRRVELATRVFER---------------------------------MTN 345
L+ ALI MY +C VE A R+ E+ + +
Sbjct: 317 LN-ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEMVG 376
R++V+W AMI+G+ HGS + ++LF MVG
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVG 406
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H +VIK+G + + N+L+++Y+ G AR LFD M R SWN+++ Y + GD+
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV---GLKGNATTMVCVV 289
S FD +P ++ V+W MI G+ +N G K R MG + G++ T+ V+
Sbjct: 97 DSTCEFFDQLPQRDSVSWTTMIVGY---KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLV 349
+ + ++ G+ VH I+++ R ++ + +L++MY KC +A VF+RM R++
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 350 SWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
SWNAMI H G + ++ F++M D V
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 248/504 (49%), Gaps = 64/504 (12%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF--PNSYTFVPLIGSCGN 162
+F P++ F NT+I Y + + ++ +R +R P+++T+ LI +
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNS-ISAFSLYREMRVSGLVEPDTHTYPFLIKAVTT 133
Query: 163 TGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSM 222
+ G H+ VI++GF S++ VQNSL+H+YA+CG
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG----------------------- 170
Query: 223 VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
D++SA+ +FD MP+K+LV WN +I+GF + P AL L+ EM S G+K +
Sbjct: 171 --------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDG 222
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T+V +++AC + L G+ VH +I++ +L L+D+Y +C RVE A +F+
Sbjct: 223 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE 282
Query: 343 MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPD 402
M ++N VSW ++I+G ++G ++ + LF M+ +G L P
Sbjct: 283 MVDKNSVSWTSLIVGLAVNGFGKEAIELFKY---MESTEG----------------LLPC 323
Query: 403 EVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCL 462
E+TF+GI G YF++M + + ++P H CM +LLA AG V +A + +
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 463 RNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKL-LVDMYPKNLACYQFLLIIYA 521
++M M ++W LL C D L E FA++ ++ + P + Y L +YA
Sbjct: 384 KSMP-----MQPNVVIWRTLLGACTVHGDSDLAE-FARIQILQLEPNHSGDYVLLSNMYA 437
Query: 522 VAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELAR 581
+W +V ++K M + +PG SLV++ VH F + +K H +A+ + E+
Sbjct: 438 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 497
Query: 582 RFR----MPSVDSGQSSVRHKENN 601
R R +P + + V +E
Sbjct: 498 RLRSEGYVPQISNVYVDVEEEEKE 521
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 247/533 (46%), Gaps = 68/533 (12%)
Query: 109 FNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRF-FPNSYTFVPLIGSCGNTGCIV 167
F P D F NT++ Y +S +PH + + +R F FP+S++F +I + N +
Sbjct: 65 FPEP-DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 168 SGRKCHAQVIKNGFDSVLPVQNSLIHMYADCG---------------------------- 199
+G + H Q +K+G +S L V +LI MY CG
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACF 183
Query: 200 ---DVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISG 256
DV AR +FD ML R+ SWN M+ GY++AG+L SA +F MP ++ V+W+ MI G
Sbjct: 184 RGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVG 243
Query: 257 FLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSS 316
+ + FRE+ G+ N ++ V++AC +S + G+ +HG + +
Sbjct: 244 IAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI 303
Query: 317 LILDTALIDMYCKCRRVELATRVFERMT-NRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+ ++ ALIDMY +C V +A VFE M R +VSW +MI G +HG E+ + LF+EM
Sbjct: 304 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 376 GMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGL 435
+ PD ++FI + G YF +M V+ +
Sbjct: 364 AYG--------------------VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHI 403
Query: 436 KPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLG 495
+P H CM +L +G + +A + M + +++W LL C ++ L
Sbjct: 404 EPEIEHYGCMVDLYGRSGKLQKAYDFICQMP-----IPPTAIVWRTLLGACSSHGNIELA 458
Query: 496 EQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYI 555
EQ + L ++ P N L YA A +W++V++++K M +R+ SLV++
Sbjct: 459 EQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKT 518
Query: 556 VHNFKVSEKR-------HEGIEAVNMMMDELARRFRMPSVDSGQSSVRHKENN 601
++ F EK+ HE ++ + + + + A P V S V +E
Sbjct: 519 MYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAG--YTPEVASALYDVEEEEKE 569
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 226/442 (51%), Gaps = 27/442 (6%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPH-LAQVFYFRSLRFRFFPNSYTFVPLI 157
V + +FR+ NP TFC NT+I C H+P L+ +F +R R P + P +
Sbjct: 64 VSYATSVFRFITNP-STFCFNTIIR-ICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFV 121
Query: 158 -GSCG--NTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR 214
+C G + + H Q ++ G S L N+LI +Y+ + A LFD R
Sbjct: 122 FKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQR 181
Query: 215 DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMG 274
D+ ++N ++DG ++A ++ A LFD MP ++LV+WN +ISG+ + + A+KLF EM
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 275 SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVE 334
++GLK + +V ++AC +S ++G+++H R L T L+D Y KC ++
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 335 LATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADR 394
A +FE +++ L +WNAMI G +HG+ E + F +MV
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSG---------------- 345
Query: 395 GVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGL 454
++PD VTFI + R+ F QM ++ + H CMA+LL AGL
Sbjct: 346 ----IKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGL 401
Query: 455 VDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQ 514
++EA + + M K DG + + W+ LL CR ++ + E+ A + + P++ Y+
Sbjct: 402 IEEAAEMIEQMPK-DGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYK 460
Query: 515 FLLIIYAVAAQWENVSTVQKLM 536
++ +YA A +WE V V++++
Sbjct: 461 VMVEMYANAERWEEVVKVREII 482
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 228/472 (48%), Gaps = 25/472 (5%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D NT+I YC+ A + P+ ++ +CG TG + R +
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+I+N + +L+ MYA G + +AR F M R+L +MV GY + G L
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 295
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
A +FD K+LV W MIS ++++ P AL++F EM G+K + +M V++AC
Sbjct: 296 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 355
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
L + + VH I S L ++ ALI+MY KC ++ VFE+M RN+VSW++
Sbjct: 356 NLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSS 415
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
MI +HG D LSLF M K E ++P+EVTF+G+
Sbjct: 416 MINALSMHGEASDALSLFARM------KQE--------------NVEPNEVTFVGVLYGC 455
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
G+ F MTD + + P H CM +L A L+ EA + + +M ++
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP-----VA 510
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQ 533
++W +L++ CR ++ LG+ AK ++++ P + + IYA +WE+V ++
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIR 570
Query: 534 KLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRM 585
++M+E+ + G S +D H F + +KRH+ + +DE+ + ++
Sbjct: 571 RVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKL 622
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 144/359 (40%), Gaps = 56/359 (15%)
Query: 101 FTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSC 160
+ L +F +P ++ N + +S +P +FY R + ++F+P++ +
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 161 GNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWN 220
+ G + H K V+ + MYA CG + AR
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYAR--------------- 166
Query: 221 SMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
+FD M +++VTWN MI + + A KLF EM +
Sbjct: 167 ----------------NVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP 210
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF 340
+ + +V+ACGR+ ++ R+++ +I R L TAL+ MY +++A F
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 341 ERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQ 400
+M+ RNL AM+ G+ G +D +FD+ D V I +D
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESD------Y 324
Query: 401 PDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAE 459
P E + F++M G+KP+ ++ + + AN G++D+A+
Sbjct: 325 PQEALRV------------------FEEMC-CSGIKPDVVSMFSVISACANLGILDKAK 364
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 248 VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGS 307
+ +N + ++ P + ++ + VG + + + + ++ A + + L EG +HG
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 308 IIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDG 367
++ + ++T +DMY C R+ A VF+ M++R++V+WN MI +C G ++
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 368 LSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFK 427
LF+EM D V+ PDE+ I R+ ++
Sbjct: 197 FKLFEEM-----------------KDSNVM---PDEMILCNIVSACGRTGNMRYNRAIYE 236
Query: 428 QMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMA 466
+ + ++ + L + + A AG +D A + R M+
Sbjct: 237 FLIEN-DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 225/436 (51%), Gaps = 26/436 (5%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ + + I SC I+ G+ CH V++NGF+S + N+LI MY C A +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD M + + +WNS+V GY+E G++ +A F+ MP+KN+V+WN +ISG ++ A+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 268 KLFREMGSV-GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
++F M S G+ + TM+ + +ACG L + ++ I + + + L T L+DM
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
+ +C E A +F +TNR++ +W A I + G+ E + LFD+M+
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI----------- 563
Query: 387 DESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
++G L+PD V F+G G+ F M + G+ P H CM
Sbjct: 564 ------EQG---LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 447 NLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMY 506
+LL AGL++EA + + +M M ++W +LLA CR + +V + A+ + +
Sbjct: 615 DLLGRAGLLEEAVQLIEDMP-----MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 507 PKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
P+ Y L +YA A +W +++ V+ MKE+ L PG+S + ++ H F ++ H
Sbjct: 670 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESH 729
Query: 567 EGIEAVNMMMDELARR 582
+ + M+DE+++R
Sbjct: 730 PEMPNIEAMLDEVSQR 745
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 32/261 (12%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQ 175
F N++I Y S + A + + R + P+ YTF + +C + +G + H
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSA 235
++K G+ A+DL NS+V Y E G+L SA
Sbjct: 160 IVKMGY-------------------------------AKDLFVQNSLVHFYAECGELDSA 188
Query: 236 HALFDVMPDKNLVTWNIMISGFLKARNPGYALKLF-REMGSVGLKGNATTMVCVVTACGR 294
+FD M ++N+V+W MI G+ + A+ LF R + + N+ TMVCV++AC +
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248
Query: 295 SARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAM 354
L+ G V+ I + ++ +AL+DMY KC +++A R+F+ NL NAM
Sbjct: 249 LEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 308
Query: 355 ILGHCIHGSPEDGLSLFDEMV 375
+ G + L +F+ M+
Sbjct: 309 ASNYVRQGLTREALGVFNLMM 329
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 32/256 (12%)
Query: 120 TVISAYCKSHDPHLAQVFYFRSLR-FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
++I Y + A +FR +R PNS T V +I +C + +G K +A +
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
+G + + ++L+ MY C + VA+ LFD A +L N+M Y+ G A +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
F++M D G++ + +M+ +++C + +
Sbjct: 325 FNLMMDS-------------------------------GVRPDRISMLSAISSCSQLRNI 353
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
G+S HG ++R S + ALIDMY KC R + A R+F+RM+N+ +V+WN+++ G+
Sbjct: 354 LWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGY 413
Query: 359 CIHGSPEDGLSLFDEM 374
+G + F+ M
Sbjct: 414 VENGEVDAAWETFETM 429
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%)
Query: 250 WNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII 309
+N +I G+ + A+ LF M + G+ + T ++AC +S G +HG I+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 310 RMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLS 369
+M L + +L+ Y +C ++ A +VF+ M+ RN+VSW +MI G+ +D +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 370 LFDEMVGMDKV 380
LF MV ++V
Sbjct: 222 LFFRMVRDEEV 232
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 225/436 (51%), Gaps = 26/436 (5%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ + + I SC I+ G+ CH V++NGF+S + N+LI MY C A +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD M + + +WNS+V GY+E G++ +A F+ MP+KN+V+WN +ISG ++ A+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 268 KLFREMGSV-GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
++F M S G+ + TM+ + +ACG L + ++ I + + + L T L+DM
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
+ +C E A +F +TNR++ +W A I + G+ E + LFD+M+
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI----------- 563
Query: 387 DESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
++G L+PD V F+G G+ F M + G+ P H CM
Sbjct: 564 ------EQG---LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 447 NLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMY 506
+LL AGL++EA + + +M M ++W +LLA CR + +V + A+ + +
Sbjct: 615 DLLGRAGLLEEAVQLIEDMP-----MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 507 PKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
P+ Y L +YA A +W +++ V+ MKE+ L PG+S + ++ H F ++ H
Sbjct: 670 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESH 729
Query: 567 EGIEAVNMMMDELARR 582
+ + M+DE+++R
Sbjct: 730 PEMPNIEAMLDEVSQR 745
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 32/261 (12%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQ 175
F N++I Y S + A + + R + P+ YTF + +C + +G + H
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSA 235
++K G+ A+DL NS+V Y E G+L SA
Sbjct: 160 IVKMGY-------------------------------AKDLFVQNSLVHFYAECGELDSA 188
Query: 236 HALFDVMPDKNLVTWNIMISGFLKARNPGYALKLF-REMGSVGLKGNATTMVCVVTACGR 294
+FD M ++N+V+W MI G+ + A+ LF R + + N+ TMVCV++AC +
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248
Query: 295 SARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAM 354
L+ G V+ I + ++ +AL+DMY KC +++A R+F+ NL NAM
Sbjct: 249 LEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 308
Query: 355 ILGHCIHGSPEDGLSLFDEMV 375
+ G + L +F+ M+
Sbjct: 309 ASNYVRQGLTREALGVFNLMM 329
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 32/256 (12%)
Query: 120 TVISAYCKSHDPHLAQVFYFRSLR-FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
++I Y + A +FR +R PNS T V +I +C + +G K +A +
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
+G + + ++L+ MY C + VA+ LFD A +L N+M Y+ G A +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
F++M D G++ + +M+ +++C + +
Sbjct: 325 FNLMMDS-------------------------------GVRPDRISMLSAISSCSQLRNI 353
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
G+S HG ++R S + ALIDMY KC R + A R+F+RM+N+ +V+WN+++ G+
Sbjct: 354 LWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGY 413
Query: 359 CIHGSPEDGLSLFDEM 374
+G + F+ M
Sbjct: 414 VENGEVDAAWETFETM 429
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%)
Query: 250 WNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII 309
+N +I G+ + A+ LF M + G+ + T ++AC +S G +HG I+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 310 RMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLS 369
+M L + +L+ Y +C ++ A +VF+ M+ RN+VSW +MI G+ +D +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 370 LFDEMVGMDKV 380
LF MV ++V
Sbjct: 222 LFFRMVRDEEV 232
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 225/491 (45%), Gaps = 32/491 (6%)
Query: 109 FNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVS 168
F NP F VI Y A Y + P S+TF L+ +CG +
Sbjct: 111 FRNP---FLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 169 GRKCHAQVIK-NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYL 227
GR+ HAQ + GF V V N++I MY C + AR +FD M RD+ SW ++ Y
Sbjct: 168 GRQFHAQTFRLRGFCFVY-VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYA 226
Query: 228 EAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVC 287
G++ A LF+ +P K++V W M++GF + P AL+ F M G++ + T+
Sbjct: 227 RVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 288 VVTACGRSARLKEG-RSVHGSIIRMFSRSS-LILDTALIDMYCKCRRVELATRVFERMTN 345
++AC + K R+V + +S S +++ +ALIDMY KC VE A VF M N
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVT 405
+N+ ++++MILG HG ++ L LF MV ++K P+ VT
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIK-------------------PNTVT 387
Query: 406 FIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNM 465
F+G GR F M FG++P H CM +LL G + EA + ++ M
Sbjct: 388 FVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM 447
Query: 466 AKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQ 525
+ + +W LL CR + + E A+ L ++ P + Y L +YA A
Sbjct: 448 S-----VEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGD 502
Query: 526 WENVSTVQKLMKERRLGIIPGSS-LVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
W V V+KL+KE+ L P S +VD +H F H + ++EL R
Sbjct: 503 WGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLT 562
Query: 585 MPSVDSGQSSV 595
+ SSV
Sbjct: 563 VLGYQPDLSSV 573
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 33/213 (15%)
Query: 170 RKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ--VARVLFDSMLARDLASWNSMVDGYL 227
++ H V++ G D + LI G AR + + + R+ W +++ GY
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 228 EAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVC 287
G A A++ M + + + S LK
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLK---------------------------- 157
Query: 288 VVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRN 347
ACG L GR H R+ + + +IDMY KC ++ A +VF+ M R+
Sbjct: 158 ---ACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERD 214
Query: 348 LVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
++SW +I + G+ E LF+ + D V
Sbjct: 215 VISWTELIAAYARVGNMECAAELFESLPTKDMV 247
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 235/479 (49%), Gaps = 35/479 (7%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRS-LRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
N++I+ + + + P + + F+ L R P+ T +I +C + I G++ H +V+
Sbjct: 222 NSLITCF-EQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 178 KNG-FDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
KN + + + N+ + MYA C ++ AR +FDSM R++ + SM+ GY A +A
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 237 ALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA 296
+F M ++N+V+WN +I+G+ + AL LF + + + ++ AC A
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 297 RLKEGRSVHGSIIRMF------SRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
L G H +++ + + +LIDMY KC VE VF +M R+ VS
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIX 410
WNAMI+G +G + L LF EM+ GE +PD +T IG+
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLE----SGE----------------KPDHITMIGVL 500
Query: 411 XXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDG 470
GR YF MT FG+ P H CM +LL AG ++EA+ + M
Sbjct: 501 SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP---- 556
Query: 471 DMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVS 530
M +S++W +LLA C+ R++ LG+ A+ L+++ P N Y L +YA +WE+V
Sbjct: 557 -MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 531 TVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRMPSVD 589
V+K M++ + PG S + ++ H F V +K H + ++ ++D L R P D
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR-PEQD 673
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 136/264 (51%), Gaps = 21/264 (7%)
Query: 147 FPNSYTFVPLIGSCGNTG-CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
F +S F L+ SC + + R HA VIK+GF + + +QN LI Y+ CG ++ R
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
+FD M R++ +WNS+V G + G L A +LF MP+++ TWN M+SGF +
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
AL F M G N + V++AC + +G VH I + S + + +AL+D
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVE 385
MY KC V A RVF+ M +RN+VSWN++I +G + L +F M+
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML---------- 245
Query: 386 IDESPCADRGVVRLQPDEVTFIGI 409
ES R++PDEVT +
Sbjct: 246 --ES--------RVEPDEVTLASV 259
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 65/286 (22%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSL-RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
N+++S + + HD + YF + + F N Y+F ++ +C + G + H+ +
Sbjct: 121 NSMVSGFAQ-HDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
K+ F S + + ++L+ MY+ CG+V A+ +FD M R++ SWNS++ + + G A
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSAR 297
+F +M L++R ++ + T+ V++AC +
Sbjct: 240 VFQMM---------------LESR----------------VEPDEVTLASVISACASLSA 268
Query: 298 LKEGRSVHGSIIRMFS-RSSLILDTALIDMYCKCRRVELATRVFE--------------- 341
+K G+ VHG +++ R+ +IL A +DMY KC R++ A +F+
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 342 ----------------RMTNRNLVSWNAMILGHCIHGSPEDGLSLF 371
+M RN+VSWNA+I G+ +G E+ LSLF
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 233/490 (47%), Gaps = 33/490 (6%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N ++S + +S A V + + F P+ T ++ S G++ + GR H VIK
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
G V +++I MY G V LF+ + N+ + G G + A +
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 239 FDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGR 294
F++ ++ N+V+W +I+G + AL+LFREM G+K N T+ ++ ACG
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 295 SARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAM 354
A L GRS HG +R+ ++ + +ALIDMY KC R+ L+ VF M +NLV WN++
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSL 460
Query: 355 ILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXX 414
+ G +HG ++ +S+F+ ++ RL+PD ++F +
Sbjct: 461 MNGFSMHGKAKEVMSIFESLMR--------------------TRLKPDFISFTSLLSACG 500
Query: 415 XXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSR 474
G YFK M++ +G+KP H CM NLL AG + EA ++ M F+ D
Sbjct: 501 QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP-FEPD--- 556
Query: 475 ESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQK 534
S +W LL CR + +V L E A+ L + P+N Y L IYA W V +++
Sbjct: 557 -SCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRN 615
Query: 535 LMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRM----PSVDS 590
M+ L PG S + +K V+ +K H I+ + MDE+++ R P++D
Sbjct: 616 KMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDF 675
Query: 591 GQSSVRHKEN 600
V +E
Sbjct: 676 ALHDVEEQEQ 685
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 5/293 (1%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
+++ L++ SN + L+ + +P + +++I A K+ + + R
Sbjct: 51 YISAKLIASYSNYNCFNDADLVLQSIPDP-TIYSFSSLIYALTKAKLFTQSIGVFSRMFS 109
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV 203
P+S+ L C G++ H +G D VQ S+ HMY CG +
Sbjct: 110 HGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 204 ARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMP----DKNLVTWNIMISGFLK 259
AR +FD M +D+ + ++++ Y G L + M + N+V+WN ++SGF +
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
+ A+ +F+++ +G + T+ V+ + G S L GR +HG +I+ +
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCV 289
Query: 320 DTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFD 372
+A+IDMY K V +F + NA I G +G + L +F+
Sbjct: 290 ISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 224 DGYLEAGDLSS---------AHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMG 274
DGY+ A ++S A + +PD + +++ +I KA+ ++ +F M
Sbjct: 49 DGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMF 108
Query: 275 SVGLKGNATTMVCVVTACGRSARLKEGRSVHG-SIIRMFSRSSLILDTALIDMYCKCRRV 333
S GL ++ + + C + K G+ +H S + + + ++ MY +C R+
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV-QGSMFHMYMRCGRM 167
Query: 334 ELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
A +VF+RM+++++V+ +A++ + G E+ + + EM
Sbjct: 168 GDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 244/489 (49%), Gaps = 33/489 (6%)
Query: 83 PFLARTL-LSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRS 141
PF+++TL S S+ VD+ ++P + N VI + S +P + Y +
Sbjct: 41 PFVSQTLSFSALSSSGDVDYAYKFLSKLSDP-PNYGWNFVIRGFSNSRNPEKSISVYIQM 99
Query: 142 LRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDV 201
LRF P+ T+ L+ S G H V+K+G + L + N+LIHMY D
Sbjct: 100 LRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQ 159
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKAR 261
AR LFD M ++L +WNS++D Y ++GD+ SA +FD M ++++VTW+ MI G++K
Sbjct: 160 ASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRG 219
Query: 262 NPGYALKLFREMGSVG-LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD 320
AL++F +M +G K N TMV V+ AC L G++VH I+ + ++IL
Sbjct: 220 EYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ 279
Query: 321 TALIDMYCKCRRVELATRVFERMTNR--NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
T+LIDMY KC + A VF R + + + + WNA+I G HG + L LF +M
Sbjct: 280 TSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM---- 335
Query: 379 KVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPN 438
E +ID PDE+TF+ + +FK + + G +P
Sbjct: 336 ---RESKID-------------PDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPK 378
Query: 439 FAHLWCMANLLANAGLVDEAEKCLRNMA-KFDGDMSRESMLWANLLALCRFRRDVYLGEQ 497
H CM ++L+ AGLV +A + M K G SML A LL C ++ L E
Sbjct: 379 SEHYACMVDVLSRAGLVKDAHDFISEMPIKPTG-----SMLGA-LLNGCINHGNLELAET 432
Query: 498 FAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVH 557
K L+++ P N Y L +YA+ Q+ ++++ M+++ + I G S++DL H
Sbjct: 433 VGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRH 492
Query: 558 NFKVSEKRH 566
F +K H
Sbjct: 493 RFIAHDKTH 501
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 241/496 (48%), Gaps = 33/496 (6%)
Query: 108 YFNNPLD------TFCVNTVISAYCKSHDPHLAQVFYFRSLRF--RFFPNSYTFVPLIGS 159
Y N LD F +N++I A+CKS P + FY R L P++YT L+ +
Sbjct: 58 YANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQA 117
Query: 160 CGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASW 219
C +G + H I+ GFD+ VQ LI +YA+ G + +F+S+ D
Sbjct: 118 CTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCR 177
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
+MV GD+ A LF+ MP+++ + WN MISG+ + AL +F M G+K
Sbjct: 178 TAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVK 237
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
N M+ V++AC + L +GR H I R + ++ L T L+D+Y KC +E A V
Sbjct: 238 VNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEV 297
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRL 399
F M +N+ +W++ + G ++G E L LF M K G +
Sbjct: 298 FWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLM----KQDG----------------V 337
Query: 400 QPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAE 459
P+ VTF+ + G+ +F M + FG++P H C+ +L A AG +++A
Sbjct: 338 TPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAV 397
Query: 460 KCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLII 519
++ M M + +W++LL R +++ LG +K ++++ N Y L I
Sbjct: 398 SIIQQMP-----MKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNI 452
Query: 520 YAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDEL 579
YA + W+NVS V++ MK + + PG S++++ VH F V +K H ++ + ++
Sbjct: 453 YADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDI 512
Query: 580 ARRFRMPSVDSGQSSV 595
+RR R+ + + V
Sbjct: 513 SRRLRLAGYKADTTPV 528
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 226/456 (49%), Gaps = 30/456 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFY--FRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRK 171
D NT++ Y + + H A FY FR +F N ++F L+ +C + + R+
Sbjct: 143 DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKF--NEFSFAGLLTACVKSRQLQLNRQ 200
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
H QV+ GF S + + S+I YA CG ++ A+ FD M +D+ W +++ GY + GD
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGD 260
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
+ +A LF MP+KN V+W +I+G+++ + AL LFR+M ++G+K T + A
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR-NLVS 350
A L+ G+ +HG +IR R + I+ ++LIDMY K +E + RVF ++ + V
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF 380
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIX 410
WN MI HG L + D+M+ R+QP+ T + I
Sbjct: 381 WNTMISALAQHGLGHKALRMLDDMIKF--------------------RVQPNRTTLVVIL 420
Query: 411 XXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDG 470
G +F+ MT G+ P+ H C+ +LL AG E + + M F+
Sbjct: 421 NACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP-FEP 479
Query: 471 DMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVS 530
D +W +L +CR + LG++ A L+ + P++ A Y L IYA +WE V
Sbjct: 480 D----KHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVE 535
Query: 531 TVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
++ +MK+RR+ S ++++ V F VS+ H
Sbjct: 536 KLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSH 571
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 13/323 (4%)
Query: 153 FVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSV-LPVQNSLIHMYADCGDVQVARVLFDSM 211
L+ CG+T + G+ H + GF + N LI MY CG A +FD M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
R+L SWN+MV GY+++G L A +FD MP++++V+WN M+ G+ + N AL ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
E G+K N + ++TAC +S +L+ R HG ++ S+++L ++ID Y KC
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID---E 388
++E A R F+ MT +++ W +I G+ G E LF EM + V I
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 389 SPCADRGV--------VRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFA 440
+R + + ++P++ TF G+ M ++PN
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAI 347
Query: 441 HLWCMANLLANAGLVDEAEKCLR 463
+ + ++ + +G ++ +E+ R
Sbjct: 348 VISSLIDMYSKSGSLEASERVFR 370
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 108/267 (40%), Gaps = 22/267 (8%)
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI-IRMFSRSSLILDTALI 324
A+ + G++ + ++ CG + LK+G+ +H + I F R + +L LI
Sbjct: 30 AVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLI 89
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
MY KC + A +VF++M RNL SWN M+ G+ G +FD M D V
Sbjct: 90 GMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNT 149
Query: 385 ---------EIDESPCADRGVVR--LQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVF 433
+ E+ + R ++ +E +F G+ R Q+ V
Sbjct: 150 MVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVL-VA 208
Query: 434 GLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVY 493
G N + + A G ++ A++C FD ++ +W L++ D+
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRC------FDEMTVKDIHIWTTLISGYAKLGDME 262
Query: 494 LGEQFAKLLVDMYPKNLACYQFLLIIY 520
E KL +M KN + L+ Y
Sbjct: 263 AAE---KLFCEMPEKNPVSWTALIAGY 286
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 227/468 (48%), Gaps = 32/468 (6%)
Query: 89 LLSRASNLCGV----DFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRF 144
LL+ ++CG D+ +F + NP + N +I Y P L + +F S++
Sbjct: 38 LLAHFISICGSLSNSDYANRVFSHIQNP-NVLVFNAMIKCYSLV-GPPLESLSFFSSMKS 95
Query: 145 R-FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV 203
R + + YT+ PL+ SC + + G+ H ++I+ GF + ++ ++ +Y G +
Sbjct: 96 RGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGD 155
Query: 204 ARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP 263
A+ +FD M R++ WN M+ G+ ++GD+ LF M ++++V+WN MIS K
Sbjct: 156 AQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRD 215
Query: 264 GYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLILDTA 322
AL+LF EM G + T+V V+ L G+ +H + + + + A
Sbjct: 216 REALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNA 275
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
L+D YCK +E AT +F +M RN+VSWN +I G ++G E G+ LFD M+ KV
Sbjct: 276 LVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKV-- 333
Query: 383 EVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHL 442
P+E TF+G+ G F M + F L+ H
Sbjct: 334 -----------------APNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHY 376
Query: 443 WCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLL 502
M +L++ +G + EA K L+NM ++ + +W +LL+ CR DV L E A L
Sbjct: 377 GAMVDLMSRSGRITEAFKFLKNMP-----VNANAAMWGSLLSACRSHGDVKLAEVAAMEL 431
Query: 503 VDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLV 550
V + P N Y L +YA +W++V V+ LMK+ RL G S +
Sbjct: 432 VKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 235/479 (49%), Gaps = 31/479 (6%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVF--YFRS 141
F+ ++ + +D+ +F +NP + F N++I AY +H+ V Y +
Sbjct: 43 FMVTKMVDFCDKIEDMDYATRLFNQVSNP-NVFLYNSIIRAY--THNSLYCDVIRIYKQL 99
Query: 142 LRFRF-FPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGD 200
LR F P+ +TF + SC + G G++ H + K G + +N+LI MY D
Sbjct: 100 LRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKA 260
+ A +FD M RD+ SWNS++ GY G + A LF +M DK +V+W MISG+
Sbjct: 160 LVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI 219
Query: 261 RNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD 320
A+ FREM G++ + +++ V+ +C + L+ G+ +H R +
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVC 279
Query: 321 TALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
ALI+MY KC + A ++F +M ++++SW+ MI G+ HG+ + F+EM
Sbjct: 280 NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEM------ 333
Query: 381 KGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFA 440
+++P+ +TF+G+ G YF M + ++P
Sbjct: 334 --------------QRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE 379
Query: 441 HLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAK 500
H C+ ++LA AG ++ A + + M M +S +W +LL+ CR ++ +
Sbjct: 380 HYGCLIDVLARAGKLERAVEITKTMP-----MKPDSKIWGSLLSSCRTPGNLDVALVAMD 434
Query: 501 LLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNF 559
LV++ P+++ Y L IYA +WE+VS ++K+++ + PG SL+++ IV F
Sbjct: 435 HLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEF 493
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 236/487 (48%), Gaps = 33/487 (6%)
Query: 111 NPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGR 170
N D NT+I+ Y +S A+ + S + +T+ ++ + R
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESP----VQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 171 KCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAG 230
+ ++ + S N+++ Y +++A+ LFD M R++++WN+M+ GY + G
Sbjct: 302 ELFDKMPERNEVS----WNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCG 357
Query: 231 DLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
+S A LFD MP ++ V+W MI+G+ ++ + AL+LF +M G + N ++ ++
Sbjct: 358 KISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALS 417
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
C L+ G+ +HG +++ + + AL+ MYCKC +E A +F+ M +++VS
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIX 410
WN MI G+ HG E L F+ M K +G L+PD+ T + +
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESM----KREG----------------LKPDDATMVAVL 517
Query: 411 XXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDG 470
GR YF MT +G+ PN H CM +LL AGL+++A ++NM F+
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP-FEP 576
Query: 471 DMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVS 530
D + +W LL R + L E A + M P+N Y L +YA + +W +V
Sbjct: 577 D----AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 632
Query: 531 TVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRMPSVDS 590
++ M+++ + +PG S ++++ H F V ++ H + + ++EL R + S
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 692
Query: 591 GQSSVRH 597
S V H
Sbjct: 693 KTSVVLH 699
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 8/185 (4%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
N +I Y G+ ++AR LFD M RDL SWN M+ GY+ +L A LF++MP++++
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
+WN M+SG+ + A +F M + N + +++A ++++++E +
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEA----CML 210
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGL 368
+ +L+ L+ + K +++ A + F+ M R++VSWN +I G+ G ++
Sbjct: 211 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 270
Query: 369 SLFDE 373
LFDE
Sbjct: 271 QLFDE 275
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
N L+ + + AR FDSM RD+ SWN+++ GY ++G + A LFD P +++
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
TW M+SG+++ R A +LF +M + N + ++ + R++ + +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDV- 337
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGL 368
M R+ +T +I Y +C ++ A +F++M R+ VSW AMI G+ G + L
Sbjct: 338 --MPCRNVSTWNT-MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394
Query: 369 SLFDEM 374
LF +M
Sbjct: 395 RLFVQM 400
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 121/249 (48%), Gaps = 15/249 (6%)
Query: 138 YFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSG--RKCHAQVIKNGFDSV----LPVQNSL 191
Y R+ R + +P S G ++SG R ++ + FD + L N +
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNG-MISGYLRNGEFELARKLFDEMPERDLVSWNVM 132
Query: 192 IHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWN 251
I Y ++ AR LF+ M RD+ SWN+M+ GY + G + A ++FD MP+KN V+WN
Sbjct: 133 IKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWN 192
Query: 252 IMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM 311
++S +++ A LF+ + L + C++ + ++ E R S M
Sbjct: 193 ALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDS---M 245
Query: 312 FSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLF 371
R + +T +I Y + +++ A ++F+ +++ +W AM+ G+ + E+ LF
Sbjct: 246 NVRDVVSWNT-IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 372 DEMVGMDKV 380
D+M ++V
Sbjct: 305 DKMPERNEV 313
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 64/160 (40%), Gaps = 39/160 (24%)
Query: 215 DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMG 274
D+ WN + Y+ G + A +F MP + V++N MISG+L+ A KLF EM
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM- 121
Query: 275 SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVE 334
L+ +I Y + R +
Sbjct: 122 --------------------------------------PERDLVSWNVMIKGYVRNRNLG 143
Query: 335 LATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
A +FE M R++ SWN M+ G+ +G +D S+FD M
Sbjct: 144 KARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM 183
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 245/532 (46%), Gaps = 32/532 (6%)
Query: 60 SCQTPRHXXXXXXXXXXXXXXRIPFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVN 119
SC+ H + F+ L+ S L VD+ +F Y +NP + +
Sbjct: 38 SCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP-NVYLYT 96
Query: 120 TVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKN 179
+I + S Y R + P++Y ++ +C C R+ HAQV+K
Sbjct: 97 AMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVC----REIHAQVLKL 152
Query: 180 GFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALF 239
GF S V ++ +Y G++ A+ +FD M RD + M++ Y E G + A LF
Sbjct: 153 GFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELF 212
Query: 240 DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLK 299
+ K+ V W MI G ++ + AL+LFREM + N T VCV++AC L+
Sbjct: 213 QDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALE 272
Query: 300 EGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHC 359
GR VH + S + ALI+MY +C + A RVF M +++++S+N MI G
Sbjct: 273 LGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLA 332
Query: 360 IHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXX 419
+HG+ + ++ F +MV +RG +P++VT + +
Sbjct: 333 MHGASVEAINEFRDMV-----------------NRG---FRPNQVTLVALLNACSHGGLL 372
Query: 420 XXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLW 479
G F M VF ++P H C+ +LL G ++EA + + N+ + + ++
Sbjct: 373 DIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP-----IEPDHIML 427
Query: 480 ANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKER 539
LL+ C+ ++ LGE+ AK L + + Y L +YA + +W+ + +++ M++
Sbjct: 428 GTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDS 487
Query: 540 RLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELAR--RFRMPSVD 589
+ PG S +++ +H F V + H EA+ + EL R RF+ +D
Sbjct: 488 GIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKENQID 539
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 228/484 (47%), Gaps = 63/484 (13%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLR-FRFFPNSYTFVPLIGSCGNTGCIVSGRK 171
LD N VIS+Y ++ D + A + +FR ++ F ++ F ++ N + GR+
Sbjct: 314 LDFVSYNVVISSYSQA-DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
H Q + DS+L V NSL+ MYA C +F+
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCE-------MFEE--------------------- 404
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
A +F +P + V+W +ISG+++ G LKLF +M L+ + +T V+ A
Sbjct: 405 ---AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
A L G+ +H IIR + ++ + L+DMY KC ++ A +VFE M +RN VSW
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 521
Query: 352 NAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXX 411
NA+I H +G E + F +M+ ES LQPD V+ +G+
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMI------------ESG--------LQPDSVSILGVLT 561
Query: 412 XXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGD 471
G YF+ M+ ++G+ P H CM +LL G EAEK + M F+ D
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP-FEPD 620
Query: 472 MSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP-KNLACYQFLLIIYAVAAQWENVS 530
++W+++L CR ++ L E+ A+ L M ++ A Y + IYA A +WE V
Sbjct: 621 ----EIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 676
Query: 531 TVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH----EGIEAVNMMMDELARRFRMP 586
V+K M+ER + +P S V++ + +H F +++ H E + +N + E+ R P
Sbjct: 677 DVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKP 736
Query: 587 SVDS 590
S
Sbjct: 737 DTSS 740
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 20/254 (7%)
Query: 125 YCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSV 184
YC S++ + R LR P+ TF+ R+ A++IK GFD+
Sbjct: 4 YCNSNEVRSRTLATLRQLRQ---PSPATFL-------------DTRRVDARIIKTGFDTD 47
Query: 185 LPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPD 244
N ++ G V AR ++D M ++ S N+M+ G+++ GD+SSA LFD MPD
Sbjct: 48 TCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPD 107
Query: 245 KNLVTWNIMISGFLKARNPGYALKLFREM--GSVGLKGNATTMVCVVTACGRSARLKEGR 302
+ +VTW I++ + + + A KLFR+M S + T ++ C +
Sbjct: 108 RTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG 167
Query: 303 SVHGSIIRMFSRSS--LILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCI 360
VH +++ ++ L + L+ YC+ RR++LA +FE + ++ V++N +I G+
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 361 HGSPEDGLSLFDEM 374
G + + LF +M
Sbjct: 228 DGLYTESIHLFLKM 241
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 161/407 (39%), Gaps = 67/407 (16%)
Query: 83 PFL--ARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFR 140
PFL + LL + +D ++F D+ NT+I+ Y K + + +
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK-DSVTFNTLITGYEKDGLYTESIHLFLK 240
Query: 141 SLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGD 200
+ P+ +TF ++ + G++ HA + GF
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGF------------------- 281
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKA 260
+RD + N ++D Y + + LFD MP+ + V++N++IS + +A
Sbjct: 282 ------------SRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 261 RNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD 320
+L FREM +G +++ + L+ GR +H + + S L +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 321 TALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
+L+DMY KC E A +F+ + R VSW A+I G+ G GL LF +M G +
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-- 447
Query: 381 KGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFA 440
L+ D+ TF + G KQ+ N
Sbjct: 448 ------------------LRADQSTFATVLKASASFASLLLG----KQLHAFIIRSGN-- 483
Query: 441 HLWCMANLLANAGLVDEAEKC--LRNMAKFDGDM-SRESMLWANLLA 484
+ N+ + +GLVD KC +++ + +M R ++ W L++
Sbjct: 484 ----LENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 147 FPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDS--VLPVQNSLIHMYADCGDVQVA 204
P+ TF L+ C + + + HA +K GFD+ L V N L+ Y + + +A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 205 RVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG 264
VLF+ + +D ++N+++ GY + G + + LF M + SG LKA
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA---- 259
Query: 265 YALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHG-SIIRMFSRSSLILDTAL 323
VGL A G+ +H S+ FSR + + +
Sbjct: 260 ----------VVGLHDFAL-----------------GQQLHALSVTTGFSRDASV-GNQI 291
Query: 324 IDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM--VGMDK 379
+D Y K RV +F+ M + VS+N +I + E L F EM +G D+
Sbjct: 292 LDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDR 349
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 226/483 (46%), Gaps = 63/483 (13%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+F P + C N V+ +S P Y + P+ YTF ++ +C
Sbjct: 68 LFDEIPKPDVSIC-NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLE 126
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFD--------------- 209
+G H +V+++GF V+N+LI +A+CGD+ +A LFD
Sbjct: 127 WRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTS 186
Query: 210 ----------------SMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIM 253
M +D +WN M+ G L+ ++ SA LFD +K++VTWN M
Sbjct: 187 GYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAM 246
Query: 254 ISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS 313
ISG++ P AL +F+EM G + T++ +++AC L+ G+ +H I+ S
Sbjct: 247 ISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETAS 306
Query: 314 RSSLI-----LDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGL 368
SS I + ALIDMY KC ++ A VF + +R+L +WN +I+G +H + E +
Sbjct: 307 VSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHA-EGSI 365
Query: 369 SLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQ 428
+F+EM + ++ P+EVTFIG+ GR YF
Sbjct: 366 EMFEEMQRL--------------------KVWPNEVTFIGVILACSHSGRVDEGRKYFSL 405
Query: 429 MTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRF 488
M D++ ++PN H CM ++L AG ++EA + +M + +++W LL C+
Sbjct: 406 MRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK-----IEPNAIVWRTLLGACKI 460
Query: 489 RRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSS 548
+V LG+ + L+ M Y L IYA QW+ V V+K+ + R+ G S
Sbjct: 461 YGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVS 520
Query: 549 LVD 551
L++
Sbjct: 521 LIE 523
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 135/328 (41%), Gaps = 31/328 (9%)
Query: 194 MYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEA------GDLSSAHALFDVMPDKNL 247
++ +C +++ + + SM+ L S S+V + + G L AH LFD +P ++
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 248 VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGS 307
N ++ G ++ P + L+ EM G+ + T V+ AC + G + HG
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 308 IIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDG 367
++R + + ALI + C + +A+ +F+ + V+W++M G+ G ++
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 368 LSLFDEMVGMDKVKGEVEIDES-PCADRGVVR------LQPDEVTFIGIXXXXXXXXXXX 420
+ LFDEM D+V V I C + R + D VT+ +
Sbjct: 198 MRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 421 XGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWA 480
FK+M D G P+ + +LL+ ++ GD+ L
Sbjct: 258 EALGIFKEMRDA-GEHPDVV---TILSLLSACAVL--------------GDLETGKRLHI 299
Query: 481 NLLALCRFRRDVYLGEQFAKLLVDMYPK 508
+L +Y+G L+DMY K
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAK 327
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 220/466 (47%), Gaps = 29/466 (6%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+F +P D N +I Y K A YF+ + P+ YT + L+ CG+
Sbjct: 188 VFARMPHP-DVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLS 246
Query: 165 CIVSGRKCHAQVIKNG--FDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSM 222
I G+ H + + G + S L + N+L+ MY C + +A+ FD+M +D+ SWN+M
Sbjct: 247 DIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTM 306
Query: 223 VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK-LFREMGSV-GLKG 280
V G++ GD+ +A A+FD MP ++LV+WN ++ G+ K ++ LF EM V +K
Sbjct: 307 VVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKP 366
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF 340
+ TMV +++ + L GR VHG +IR+ + L +ALIDMYCKC +E A VF
Sbjct: 367 DRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF 426
Query: 341 ERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQ 400
+ T +++ W +MI G HG+ + L LF M + GV
Sbjct: 427 KTATEKDVALWTSMITGLAFHGNGQQALQLFGRM-----------------QEEGVT--- 466
Query: 401 PDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEK 460
P+ VT + + G F M D FG P H + +LL AG V+EA
Sbjct: 467 PNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEA-- 524
Query: 461 CLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIY 520
+++ + M +W ++L+ CR D+ E L+ + P+ Y L IY
Sbjct: 525 --KDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIY 582
Query: 521 AVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
A +W ++ M+ R + G S V +H F +EK++
Sbjct: 583 ATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQN 628
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 183/426 (42%), Gaps = 68/426 (15%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIG 158
+D L+F F + F NT+ISA S + Y +R R P+ TF+ L+
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFG--LYSSMIRHRVSPDRQTFLYLMK 141
Query: 159 SCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLAS 218
+ + + ++ H +I +G L + N L
Sbjct: 142 A---SSFLSEVKQIHCHIIVSG---CLSLGNYL--------------------------- 168
Query: 219 WNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL 278
WNS+V Y+E G+ A +F MP ++ ++N+MI G+ K ALKL+ +M S G+
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIR---MFSRSSLILDTALIDMYCKCRRVEL 335
+ + T++ ++ CG + ++ G+ VHG I R ++S S+LIL AL+DMY KC+ L
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYS-SNLILSNALLDMYFKCKESGL 287
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI---DESPCA 392
A R F+ M +++ SWN M++G G E ++FD+M D V + + C
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 393 DRGVVRL----------QPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHL 442
R V L +PD VT + + GR V GL L
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW-------VHGL---VIRL 397
Query: 443 WCMANLLANAGLVDEAEKC---LRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFA 499
+ ++ L+D KC R F ++ LW +++ F + G+Q
Sbjct: 398 QLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN---GQQAL 454
Query: 500 KLLVDM 505
+L M
Sbjct: 455 QLFGRM 460
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/561 (27%), Positives = 244/561 (43%), Gaps = 92/561 (16%)
Query: 85 LARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRF 144
+A L+S S + + +F P C N++I A+ ++ P+ A + RF
Sbjct: 53 IAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC-NSLIRAHAQNSQPYQAFFVFSEMQRF 111
Query: 145 RFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV- 203
F +++T+ L+ +C + + H + K G S + V N+LI Y+ CG + V
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVR 171
Query: 204 --------------------------------ARVLFDSMLARDLASWNSMVDGYL---- 227
AR LFD M RDL SWN+M+DGY
Sbjct: 172 DAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCRE 231
Query: 228 ---------------------------EAGDLSSAHALFDVMP--DKNLVTWNIMISGFL 258
+AGD+ A +FD MP KN+VTW I+I+G+
Sbjct: 232 MSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYA 291
Query: 259 KARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLI 318
+ A +L +M + GLK +A ++ ++ AC S L G +H + R S+
Sbjct: 292 EKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAY 351
Query: 319 LDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
+ AL+DMY KC ++ A VF + ++LVSWN M+ G +HG ++ + LF M
Sbjct: 352 VLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM---- 407
Query: 379 KVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPN 438
+ +G ++PD+VTFI + G YF M V+ L P
Sbjct: 408 RREG----------------IRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQ 451
Query: 439 FAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQF 498
H C+ +LL G + EA K ++ M M ++W LL CR +V + ++
Sbjct: 452 VEHYGCLVDLLGRVGRLKEAIKVVQTMP-----MEPNVVIWGALLGACRMHNEVDIAKEV 506
Query: 499 AKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHN 558
LV + P + Y L IYA A WE V+ ++ MK + G+S V+L+ +H
Sbjct: 507 LDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHE 566
Query: 559 FKVSEKRHEGIEAVNMMMDEL 579
F V +K H + + M+ L
Sbjct: 567 FTVFDKSHPKSDQIYQMLGSL 587
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 219/438 (50%), Gaps = 61/438 (13%)
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLE 228
G H+ VI++GF S++ VQNSL+H+YA+CG
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCG----------------------------- 37
Query: 229 AGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCV 288
D++SA+ +FD MP+K+LV WN +I+GF + P AL L+ EM S G+K + T+V +
Sbjct: 38 --DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 95
Query: 289 VTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL 348
++AC + L G+ VH +I++ +L L+D+Y +C RVE A +F+ M ++N
Sbjct: 96 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 155
Query: 349 VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIG 408
VSW ++I+G ++G ++ + LF M+ +G L P E+TF+G
Sbjct: 156 VSWTSLIVGLAVNGFGKEAIELFKY---MESTEG----------------LLPCEITFVG 196
Query: 409 IXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKF 468
I G YF++M + + ++P H CM +LLA AG V +A + +++M
Sbjct: 197 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP-- 254
Query: 469 DGDMSRESMLWANLLALCRFRRDVYLGEQFAKL-LVDMYPKNLACYQFLLIIYAVAAQWE 527
M ++W LL C D L E FA++ ++ + P + Y L +YA +W
Sbjct: 255 ---MQPNVVIWRTLLGACTVHGDSDLAE-FARIQILQLEPNHSGDYVLLSNMYASEQRWS 310
Query: 528 NVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR--- 584
+V ++K M + +PG SLV++ VH F + +K H +A+ + E+ R R
Sbjct: 311 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 370
Query: 585 -MPSVDSGQSSVRHKENN 601
+P + + V +E
Sbjct: 371 YVPQISNVYVDVEEEEKE 388
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N+VI+ + ++ P A Y P+ +T V L+ +C G + G++ H
Sbjct: 53 DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 112
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+IK G L N L+ +YA CG V+ A+ LFD M+ ++ SW S++ G
Sbjct: 113 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG-------- 164
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV-GLKGNATTMVCVVTAC 292
+ ++GF K A++LF+ M S GL T V ++ AC
Sbjct: 165 ------------------LAVNGFGKE-----AIELFKYMESTEGLLPCEITFVGILYAC 201
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTA-LIDMYCKCRRVELATRVFERMTNR-NLVS 350
+KEG + + I ++D+ + +V+ A + M + N+V
Sbjct: 202 SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 261
Query: 351 WNAMILGHCIHGSPE 365
W ++ +HG +
Sbjct: 262 WRTLLGACTVHGDSD 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 27/188 (14%)
Query: 296 ARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
A ++ G ++H +IR S + + +L+ +Y C V A +VF++M ++LV+WN++I
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 356 LGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXX 415
G +G PE+ L+L+ EM KG ++PD T + +
Sbjct: 62 NGFAENGKPEEALALYTEM----NSKG----------------IKPDGFTIVSLLSACAK 101
Query: 416 XXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRE 475
G+ M V GL N + +L A G V+EA+ FD + +
Sbjct: 102 IGALTLGKRVHVYMIKV-GLTRNLHSSNVLLDLYARCGRVEEAKTL------FDEMVDKN 154
Query: 476 SMLWANLL 483
S+ W +L+
Sbjct: 155 SVSWTSLI 162
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 222/468 (47%), Gaps = 58/468 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N +IS Y ++ + A + ++ P+ T V ++ +C +G I GR+ H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+ +GF S L + N+LI +Y+ C G+L
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKC-------------------------------GELE 318
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+A LF+ +P K++++WN +I G+ AL LF+EM G N TM+ ++ AC
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 294 RSARLKEGRSVHGSIIRMFS--RSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
+ GR +H I + ++ L T+LIDMY KC +E A +VF + +++L SW
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 352 NAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXX 411
NAMI G +HG + LF M + +QPD++TF+G+
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRK--------------------IGIQPDDITFVGLLS 478
Query: 412 XXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGD 471
GR F+ MT + + P H CM +LL ++GL EAE+ + M
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME----- 533
Query: 472 MSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVST 531
M + ++W +LL C+ +V LGE FA+ L+ + P+N Y L IYA A +W V+
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 593
Query: 532 VQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDEL 579
+ L+ ++ + +PG S +++ +VH F + +K H + M++E+
Sbjct: 594 TRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 163/304 (53%), Gaps = 3/304 (0%)
Query: 98 GVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLI 157
G+ + + +F+ P + NT+ + S DP A Y + PNSYTF ++
Sbjct: 83 GLPYAISVFKTIQEP-NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141
Query: 158 GSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA 217
SC + G++ H V+K G D L V SLI MY G ++ A +FD RD+
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 201
Query: 218 SWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG 277
S+ +++ GY G + +A LFD +P K++V+WN MISG+ + N AL+LF++M
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 261
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELAT 337
++ + +TMV VV+AC +S ++ GR VH I S+L + ALID+Y KC +E A
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 321
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE--SPCADRG 395
+FER+ ++++SWN +I G+ ++ L LF EM+ + +V + CA G
Sbjct: 322 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381
Query: 396 VVRL 399
+ +
Sbjct: 382 AIDI 385
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 228/481 (47%), Gaps = 59/481 (12%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N +I + +S+DP L+ + + P+S+T L+ +C + G++ H +I+
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
N L RDL + S++ Y+ G+L + AL
Sbjct: 525 N-------------------------------WLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
FD M DK+LV+WN +I+G+L+ P AL +FR+M G++ +M+ V AC L
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
+ GR H ++ + +LIDMY K + +++VF + ++ SWNAMI+G+
Sbjct: 614 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY 673
Query: 359 CIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXX 418
IHG ++ + LF+EM + G PD++TF+G+
Sbjct: 674 GIHGLAKEAIKLFEEM----QRTGH----------------NPDDLTFLGVLTACNHSGL 713
Query: 419 XXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRES-- 476
G Y QM FGLKPN H C+ ++L AG +D+A LR +A+ +MS E+
Sbjct: 714 IHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKA---LRVVAE---EMSEEADV 767
Query: 477 MLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLM 536
+W +LL+ CR +++ +GE+ A L ++ P+ Y L +YA +WE+V V++ M
Sbjct: 768 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827
Query: 537 KERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRMPSVDSGQSSVR 596
E L G S ++L V +F V E+ +G E + + L + SV+
Sbjct: 828 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 887
Query: 597 H 597
H
Sbjct: 888 H 888
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 118/277 (42%), Gaps = 32/277 (11%)
Query: 114 DTFCVNTVISAYCKS--HDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRK 171
+ F N VIS+Y ++ +D L S P+ +T+ +I +C + G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTT-DLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
H V+K G + V N+L+ Y G V A LFD M R+L SWNSM+ + + G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
+ L M ++N G + T+V V+
Sbjct: 269 SEESFLLLGEMMEEN---------------------------GDGAFMPDVATLVTVLPV 301
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
C R + G+ VHG +++ L+L+ AL+DMY KC + A +F+ N+N+VSW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 352 NAMILGHCIHGSPEDGLSLFDEMV--GMDKVKGEVEI 386
N M+ G G + +M+ G D EV I
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI 398
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 35/222 (15%)
Query: 146 FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
F P+ T V ++ C I G+ H +K D L + N+L+ MY+ C
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC------- 340
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
G +++A +F + +KN+V+WN M+ GF +
Sbjct: 341 ------------------------GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHG 376
Query: 266 ALKLFREM--GSVGLKGNATTMVCVVTACGRSARLKEGRSVHG-SIIRMFSRSSLILDTA 322
+ R+M G +K + T++ V C + L + +H S+ + F + L+ + A
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN-A 435
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSP 364
+ Y KC + A RVF + ++ + SWNA+I GH P
Sbjct: 436 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 477
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 41/226 (18%)
Query: 156 LIGSCGNTGCIVSGRKCHAQV-----IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDS 210
L+ + G I GRK H V ++N D VL + +I MYA CG +R +FD+
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRN--DDVLCTR--IITMYAMCGSPDDSRFVFDA 145
Query: 211 MLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLF 270
+ +++L WN+++ Y S + L+D + L+ F
Sbjct: 146 LRSKNLFQWNAVISSY-------SRNELYDEV------------------------LETF 174
Query: 271 REM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCK 329
EM + L + T CV+ AC + + G +VHG +++ + + AL+ Y
Sbjct: 175 IEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGT 234
Query: 330 CRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
V A ++F+ M RNLVSWN+MI +G E+ L EM+
Sbjct: 235 HGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/491 (27%), Positives = 240/491 (48%), Gaps = 31/491 (6%)
Query: 94 SNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPH---LAQVFYFRSLRFRFFPNS 150
SN + + +F + P +T+ NT+I A +P+ +A Y + P++
Sbjct: 58 SNAGHLRYAYSVFTHQPCP-NTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDT 116
Query: 151 YTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDS 210
+TF ++ + GR+ H QV+ GFDS + V LI MY CG + AR +FD
Sbjct: 117 FTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDE 176
Query: 211 MLARDLASWNSMVDGYLEAGDLSSAHALFDVMP--DKNLVTWNIMISGFLKARNPGYALK 268
ML +D+ WN+++ GY + G++ A +L ++MP +N V+W +ISG+ K+ A++
Sbjct: 177 MLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIE 236
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
+F+ M ++ + T++ V++AC L+ G + + ++ L+ A+IDMY
Sbjct: 237 VFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYA 296
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
K + A VFE + RN+V+W +I G HG + L++F+ MV
Sbjct: 297 KSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMV------------- 343
Query: 389 SPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANL 448
GV +P++VTFI I G+ F M +G+ PN H CM +L
Sbjct: 344 ----KAGV---RPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 449 LANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPK 508
L AG + EA++ +++M + +W +LLA D+ LGE+ L+ + P
Sbjct: 397 LGRAGKLREADEVIKSMP-----FKANAAIWGSLLAASNVHHDLELGERALSELIKLEPN 451
Query: 509 NLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEG 568
N Y L +Y+ +W+ ++ +MK + + G S ++++ V+ F + H
Sbjct: 452 NSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQ 511
Query: 569 IEAVNMMMDEL 579
+E ++ ++ E+
Sbjct: 512 VERIHEILQEM 522
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 214/452 (47%), Gaps = 55/452 (12%)
Query: 147 FPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV 206
F +S V +I +C H+ VIK GFD + V N+L+ YA G+
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE------ 233
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
G ++ A +FD + DK+ V++N ++S + ++ A
Sbjct: 234 -----------------------GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 267 LKLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
++FR + + + NA T+ V+ A S L+ G+ +H +IRM +I+ T++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVE 385
MYCKC RVE A + F+RM N+N+ SW AMI G+ +HG L LF M+
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI---------- 380
Query: 386 IDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCM 445
D GV +P+ +TF+ + G +F M FG++P H CM
Sbjct: 381 -------DSGV---RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCM 430
Query: 446 ANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDM 505
+LL AG + +A ++ M M +S++W++LLA CR ++V L E L ++
Sbjct: 431 VDLLGRAGFLQKAYDLIQRMK-----MKPDSIIWSSLLAACRIHKNVELAEISVARLFEL 485
Query: 506 YPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKR 565
N Y L IYA A +W++V V+ +MK R L PG SL++L VH F + ++
Sbjct: 486 DSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEE 545
Query: 566 HEGIEAVNMMMDELARRFRMPSVDSGQSSVRH 597
H E + + EL R+ S SSV H
Sbjct: 546 HPQREKIYEFLAELNRKLLEAGYVSNTSSVCH 577
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 135/280 (48%), Gaps = 32/280 (11%)
Query: 100 DFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGS 159
+ T L RY + D F N+VI+ +S D A + + + +P +F I +
Sbjct: 27 NLTTLFNRYVDKT-DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 160 CGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASW 219
C + I SG++ H Q G+ S + V ++LI MY+ CG ++ AR +FD + R++ SW
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 220 NSMVDGYLEAGDLSSAHALF-DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL 278
SM+ GY G+ A +LF D++ D+N + A+ L
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDEN---------------DDDDAMFL--------- 181
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSII-RMFSRSSLILDTALIDMYCKCRR--VEL 335
++ +V V++AC R S+H +I R F R + +T L+D Y K V +
Sbjct: 182 --DSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNT-LLDAYAKGGEGGVAV 238
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
A ++F+++ +++ VS+N+++ + G + +F +V
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 13/238 (5%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFP-NSYTFVPLIGSCGNTGCIVSGRKC 172
D N+++S Y +S + A + R ++ + N+ T ++ + ++G + G+
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H QVI+ G + + V S+I MY CG V+ AR FD M +++ SW +M+ GY G
Sbjct: 310 HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHA 369
Query: 233 SSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREM-GSVGLKGNATTMVC 287
+ A LF M D N +T+ +++ A + F M G G++ C
Sbjct: 370 AKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGC 429
Query: 288 VVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELA----TRVFE 341
+V GR+ L++ + I RM + I+ ++L+ + VELA R+FE
Sbjct: 430 MVDLLGRAGFLQKAYDL---IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 240/516 (46%), Gaps = 73/516 (14%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHD---PHLAQVFYFR 140
FL +L +S+ V++ +F N +F NT+I A C +HD A + Y +
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENH-SSFMWNTLIRA-C-AHDVSRKEEAFMLYRK 140
Query: 141 SL-RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCG 199
L R P+ +TF ++ +C G++ H Q++K+GF + V N LIH+Y CG
Sbjct: 141 MLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 200
Query: 200 DVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLK 259
+ +AR +FD MP+++LV+WN MI ++
Sbjct: 201 CLDLAR-------------------------------KVFDEMPERSLVSWNSMIDALVR 229
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRS---S 316
AL+LFREM + + TM V++AC L G H ++R
Sbjct: 230 FGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 317 LILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVG 376
+++ +LI+MYCKC + +A +VF+ M R+L SWNAMILG HG E+ ++ FD MV
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV- 347
Query: 377 MDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLK 436
DK + ++P+ VTF+G+ GR YF M + ++
Sbjct: 348 -DKREN----------------VRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIE 390
Query: 437 PNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLL-ALCRFRRDVYLG 495
P H C+ +L+A AG + EA + +M M ++++W +LL A C+ V L
Sbjct: 391 PALEHYGCIVDLIARAGYITEAIDMVMSMP-----MKPDAVIWRSLLDACCKKGASVELS 445
Query: 496 EQFAKLLV----DMYPKNLAC---YQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSS 548
E+ A+ ++ D N C Y L +YA A++W +V V+KLM E + PG S
Sbjct: 446 EEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 505
Query: 549 LVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
+++ I H F + H + + + + R R
Sbjct: 506 SIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLR 541
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 221/442 (50%), Gaps = 29/442 (6%)
Query: 148 PNSYTFVPLIGSCGN--TGCIVSGRKCHAQVIKNGFD-SVLPVQNSLIHMYADCGDVQVA 204
PN TF+ L+ CG+ +G G H K G D + + V ++I MY+ G + A
Sbjct: 69 PNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKA 128
Query: 205 RVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG 264
R++FD M ++ +WN+M+DGY+ +G + +A +FD MP+++L++W MI+GF+K
Sbjct: 129 RLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQE 188
Query: 265 YALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
AL FREM G+K + ++ + AC L G VH ++ ++++ + +LI
Sbjct: 189 EALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLI 248
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
D+YC+C VE A +VF M R +VSWN++I+G +G+ + L F +M + KG
Sbjct: 249 DLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM----QEKG-- 302
Query: 385 EIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWC 444
+PD VTF G G YF+ M + + P H C
Sbjct: 303 --------------FKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGC 348
Query: 445 MANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALC-RFRRDVYLGEQFAKLLV 503
+ +L + AG +++A K +++M M ++ +LLA C ++ L E+ K L
Sbjct: 349 LVDLYSRAGRLEDALKLVQSMP-----MKPNEVVIGSLLAACSNHGNNIVLAERLMKHLT 403
Query: 504 DMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSE 563
D+ K+ + Y L +YA +WE S +++ MK L PG S +++ +H F +
Sbjct: 404 DLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGD 463
Query: 564 KRHEGIEAVNMMMDELARRFRM 585
H + +++ ++ R+
Sbjct: 464 NAHVETTYIREVLELISSDLRL 485
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 224/472 (47%), Gaps = 26/472 (5%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N++I+ + + P A + + + T V ++ +C + GR+
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+ + +N + L + N+++ MY CG ++ A+ LFD+M +D +W +M+DGY + D
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMG-SVGLKGNATTMVCVVTAC 292
+A + + MP K++V WN +IS + + P AL +F E+ +K N T+V ++AC
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
+ L+ GR +H I + R + + +ALI MY KC +E + VF + R++ W+
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX 412
AMI G +HG + + +F +M + ++P+ VTF +
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEAN--------------------VKPNGVTFTNVFCA 475
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
S F QM +G+ P H C+ ++L +G +++A K + M +
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP-----I 530
Query: 473 SRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTV 532
+ +W LL C+ ++ L E L+++ P+N + L IYA +WENVS +
Sbjct: 531 PPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSEL 590
Query: 533 QKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
+K M+ L PG S +++ ++H F + H E V + E+ + +
Sbjct: 591 RKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK 642
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 146/302 (48%), Gaps = 37/302 (12%)
Query: 83 PFLARTLLSRA--SNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFR 140
P+ A L + A S+ +++ +F P ++F NT+I AY DP L+ ++ F
Sbjct: 62 PYSASKLFAMAALSSFASLEYARKVFDEIPKP-NSFAWNTLIRAYASGPDPVLS-IWAFL 119
Query: 141 SL--RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADC 198
+ + +PN YTF LI + + G+ H +K+ S + V NSLIH Y C
Sbjct: 120 DMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC 179
Query: 199 GDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFL 258
GD+ A +F ++ +D+ SWNSM++G+++ G PDK
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS-----------PDK------------- 215
Query: 259 KARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLI 318
AL+LF++M S +K + TMV V++AC + L+ GR V I +L
Sbjct: 216 -------ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 319 LDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
L A++DMY KC +E A R+F+ M ++ V+W M+ G+ I E + + M D
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 379 KV 380
V
Sbjct: 329 IV 330
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 207/436 (47%), Gaps = 26/436 (5%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
+ +T+ +I +C G + G++ HA V++ D NSL+ +Y CG AR +F
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIF 343
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
+ M A+DL SWN+++ GY+ +G + A +F M +KN+++W IMISG + LK
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
LF M G + + +C G+ H ++++ SSL ALI MY
Sbjct: 404 LFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYA 463
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
KC VE A +VF M + VSWNA+I HG + + +++EM+ KG
Sbjct: 464 KCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK----KG------ 513
Query: 389 SPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANL 448
++PD +T + + GR YF M V+ + P H + +L
Sbjct: 514 ----------IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDL 563
Query: 449 LANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPK 508
L +G +AE + ++ + +W LL+ CR ++ LG A L + P+
Sbjct: 564 LCRSGKFSDAESVIESLP-----FKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 509 NLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEG 568
+ Y L ++A QWE V+ V+KLM++R + S ++++ VH F V + H
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Query: 569 IEAVNMMMDELARRFR 584
EAV + + +L + R
Sbjct: 679 AEAVYIYLQDLGKEMR 694
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 193/423 (45%), Gaps = 35/423 (8%)
Query: 85 LARTLLSRASNLCGV-DFTLLIFRYFNNPL---DTFCVNTVISAYCKSHDPHLAQVFYFR 140
+ART + S C D TL + P+ DT N +I+ + ++D + A + +
Sbjct: 81 IARTTM--VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 141 SLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC---HAQVIKNGFDSVLPVQNSLIHMYAD 197
F P+++TF ++ G ++C HA +K+G + V N+L+ +Y+
Sbjct: 139 MKHEGFKPDNFTFASVLA--GLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK 196
Query: 198 CGD----VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDK-NLVTWNI 252
C + AR +FD +L +D SW +M+ GY++ G L + M D LV +N
Sbjct: 197 CASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNA 256
Query: 253 MISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMF 312
MISG++ AL++ R M S G++ + T V+ AC + L+ G+ VH ++R
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR- 315
Query: 313 SRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFD 372
S D +L+ +Y KC + + A +FE+M ++LVSWNA++ G+ G + +F
Sbjct: 316 EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFK 375
Query: 373 EMVGMDKVKGEVEID---ESPCADRGVV--------RLQPDEVTFIGIXXXXXXXXXXXX 421
EM + + + I E+ + G+ +P + F G
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 422 GRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWAN 481
G+ Y Q+ + G + + + + A G+V+EA + R M D S+ W
Sbjct: 436 GQQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD------SVSWNA 488
Query: 482 LLA 484
L+A
Sbjct: 489 LIA 491
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 33/237 (13%)
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
R F P Y F I SC G +G++ HAQ++K GFDS L N+LI MYA CG V+
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVE 469
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
AR +F +M D SWN+++ + G +
Sbjct: 470 EARQVFRTMPCLDSVSWNALIAALGQHG-------------------------------H 498
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
A+ ++ EM G++ + T++ V+TAC + + +GR S+ ++ A
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 323 -LIDMYCKCRRVELATRVFERMTNRNLVS-WNAMILGHCIHGSPEDGLSLFDEMVGM 377
LID+ C+ + A V E + + W A++ G +HG+ E G+ D++ G+
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGL 615
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 12/218 (5%)
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLE 228
R H +I GF + N LI +Y ++ AR LFD + D + +MV GY
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 229 AGDLSSAHALFDVMPD--KNLVTWNIMISGFLKARNPGY-ALKLFREMGSVGLKGNATTM 285
+GD++ A +F+ P ++ V +N MI+GF N GY A+ LF +M G K + T
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGF-SHNNDGYSAINLFCKMKHEGFKPDNFTF 151
Query: 286 VCVVTACGRSA-RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRR----VELATRVF 340
V+ A K+ H + ++ + + AL+ +Y KC + A +VF
Sbjct: 152 ASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 341 ERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
+ + ++ SW M+ G+ +G + G L + GMD
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLE---GMD 246
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/548 (24%), Positives = 242/548 (44%), Gaps = 59/548 (10%)
Query: 56 LLQSSCQTPRHXXXXXXXXXXXXXXRIPFLARTL--LSRASNLCGVDFTLLIFRYFNNPL 113
LL S C + R + F+A+ + + + + + +F + P
Sbjct: 34 LLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP- 92
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N++ Y + +P + L P++YTF L+ +C + GR+ H
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+K G D + V +LI+MY +C DV AR +FD ++ + +N+M+ GY
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGY------- 205
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+ P AL LFREM LK N T++ V+++C
Sbjct: 206 ------------------------ARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCA 241
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
L G+ +H + + ++TALIDM+ KC ++ A +FE+M ++ +W+A
Sbjct: 242 LLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSA 301
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
MI+ + HG E + +F+ M + +QPDE+TF+G+
Sbjct: 302 MIVAYANHGKAEKSMLMFERMRSEN--------------------VQPDEITFLGLLNAC 341
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
GR YF QM FG+ P+ H M +LL+ AG +++A + + + +S
Sbjct: 342 SHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP-----IS 396
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQ 533
MLW LLA C ++ L E+ ++ + ++ + Y L +YA +WE V +++
Sbjct: 397 PTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLR 456
Query: 534 KLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRMPSVDSGQS 593
K+MK+R+ +PG S +++ +VH F + ++ +DE+ + ++ S
Sbjct: 457 KVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTS 516
Query: 594 SVRHKENN 601
V H N
Sbjct: 517 MVVHANMN 524
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 203/428 (47%), Gaps = 33/428 (7%)
Query: 160 CGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASW 219
C + K H VIK GF+ LP +N+LIH+Y G V+ A LF + + + SW
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESW 363
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPD--------KNLVTWNIMISGFLKARNPGYALKLFR 271
NS++ +++AG L A +LF + + N+VTW +I G +L+ FR
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
+M + N+ T+ C+++ C L GR +HG +IR ++++ AL++MY KC
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCG 483
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPC 391
+ + VFE + +++L+SWN++I G+ +HG E LS+FD M+
Sbjct: 484 LLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSG------------- 530
Query: 392 ADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLAN 451
PD + + + GR F M+ FGL+P H C+ +LL
Sbjct: 531 -------FHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGR 583
Query: 452 AGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLA 511
G + EA + ++NM M + + LL CR ++V + E A L + P+
Sbjct: 584 VGFLKEASEIVKNMP-----MEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTG 638
Query: 512 CYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEA 571
Y L IY+ +WE + V+ L K++ L + GSS +++K + F E
Sbjct: 639 SYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFET 698
Query: 572 VNMMMDEL 579
+ ++++L
Sbjct: 699 IYPVLEDL 706
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 120/269 (44%), Gaps = 10/269 (3%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLI-GSCGNTGCIVSGRKCHAQVI 177
N+++ A SH + + +R +R R +PLI +C G R H QVI
Sbjct: 127 NSILKANV-SHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
+ G L V N L+ +Y G + A LF M R+ SWN M+ G+ + D SA
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 238 LFDVM------PDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
+F+ M PD+ VTW ++S + LK F M G + + +
Sbjct: 246 IFEWMQREEFKPDE--VTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSV 303
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
C L VHG +I+ L ALI +Y K +V+ A +F ++ N+ + SW
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESW 363
Query: 352 NAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
N++I G ++ LSLF E+ M+ V
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHV 392
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 6/173 (3%)
Query: 138 YFRSLRF-RFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYA 196
YFR ++F + NS T ++ C + GR+ H VI+ + VQN+L++MYA
Sbjct: 421 YFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYA 480
Query: 197 DCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISG 256
CG + ++F+++ +DL SWNS++ GY G A ++FD M I +
Sbjct: 481 KCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVA 540
Query: 257 FLKARNPGYALKLFREM-----GSVGLKGNATTMVCVVTACGRSARLKEGRSV 304
L A + ++ RE+ GL+ C+V GR LKE +
Sbjct: 541 VLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEI 593
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 111/273 (40%), Gaps = 51/273 (18%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLR-------FRFFPNSYTFVPLIGSCGNTGC 165
L FC T Y P V + SL F +F + L+G C
Sbjct: 18 LRNFCFLTSQCPYTSISSPDTVSVSSYYSLTSNNDQSLFHYFDH------LLGLCLTAQ- 70
Query: 166 IVSGRKCHAQVIKNGFD-SVLPVQNSLIHMYADCGDVQVARVLFDSM---LARDLASWNS 221
R+ HAQV+ + F + +LI +YA G + AR +F+++ L DL WNS
Sbjct: 71 --QCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNS 128
Query: 222 MVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGN 281
++ + +H L++ AL+L+R M GL G+
Sbjct: 129 ILKA-------NVSHGLYE------------------------NALELYRGMRQRGLTGD 157
Query: 282 ATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFE 341
+ ++ AC R R+ H +I++ + +L + L+ +Y K R+ A +F
Sbjct: 158 GYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFV 217
Query: 342 RMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
M RN +SWN MI G E + +F+ M
Sbjct: 218 EMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWM 250
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/534 (26%), Positives = 248/534 (46%), Gaps = 69/534 (12%)
Query: 85 LARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRF 144
+A L+S +S L D++L IFR + + F +N +I ++ + + LR
Sbjct: 62 VAAQLVSCSSLLKSPDYSLSIFRN-SEERNPFVLNALIRGLTENARFESSVRHFILMLRL 120
Query: 145 RFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCG----- 199
P+ TF ++ S G GR HA +KN D V+ SL+ MYA G
Sbjct: 121 GVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHA 180
Query: 200 ------------------------------DVQVARVLFDSMLARDLASWNSMVDGYLEA 229
D+ +A LF SM R+ SW++++ GY+++
Sbjct: 181 FQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDS 240
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
G+L+ A LF++MP+KN+V+W +I+GF + + A+ + EM GLK N T+ V+
Sbjct: 241 GELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVL 300
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLV 349
+AC +S L G +HG I+ + + TAL+DMY KC ++ A VF M +++++
Sbjct: 301 SACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL 360
Query: 350 SWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGI 409
SW AMI G +HG + F +M+ GE +PDEV F+ +
Sbjct: 361 SWTAMIQGWAVHGRFHQAIQCFRQMM----YSGE----------------KPDEVVFLAV 400
Query: 410 XXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFD 469
G ++F M + ++P H + +LL AG ++EA + + NM +
Sbjct: 401 LTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP-IN 459
Query: 470 GDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENV 529
D++ WA L C+ + E ++ L+++ P+ Y FL +A ++V
Sbjct: 460 PDLT----TWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDV 515
Query: 530 S----TVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDEL 579
++QK +KER LG S ++L ++ F + H+ + + + +DE+
Sbjct: 516 EKRRLSLQKRIKERSLGW----SYIELDGQLNKFSAGDYSHKLTQEIGLKLDEI 565
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 147/371 (39%), Gaps = 27/371 (7%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ F+ LI +C +T + R HAQ+++ G S V L+ + + +
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSI 82
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F + R+ N+++ G E S+ F +M + + LK+ +
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 268 KLFREMGSVGLKG----NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTAL 323
L R + + LK ++ + +V ++ +LK V + S+++ L
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 324 IDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVK-- 381
I+ YC+ + + +AT +F M RN SW+ +I G+ G LF+ M + V
Sbjct: 203 INGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWT 262
Query: 382 ---------GEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDV 432
G+ E S + L+P+E T + G + D
Sbjct: 263 TLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN 322
Query: 433 FGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESML--WAN----LLALC 486
G+K + A + ++ A G +D A NM D +S +M+ WA A+
Sbjct: 323 -GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKD-ILSWTAMIQGWAVHGRFHQAIQ 380
Query: 487 RFRRDVYLGEQ 497
FR+ +Y GE+
Sbjct: 381 CFRQMMYSGEK 391
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 233/503 (46%), Gaps = 58/503 (11%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSL- 142
FL L+ GV IF N+ +D +IS Y + ++ + FR L
Sbjct: 376 FLTSALIDAYFKCRGVSMAQNIFSQCNS-VDVVVFTAMISGYLH-NGLYIDSLEMFRWLV 433
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
+ + PN T V ++ G + GR+ H +IK GFD+ + ++I MYA CG +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
+A + +F+ + +++V+WN MI+ ++ N
Sbjct: 494 LA-------------------------------YEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
P A+ +FR+MG G+ + ++ ++AC G+++HG +I+ S + ++
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST 582
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
LIDMY KC ++ A VF+ M +N+VSWN++I HG +D L LF EMV ++
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR- 641
Query: 383 EVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHL 442
PD++TF+ I G +F+ MT+ +G++P H
Sbjct: 642 ------------------PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHY 683
Query: 443 WCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLL 502
C+ +L AG + EA + +++M F D +W LL CR ++V L E + L
Sbjct: 684 ACVVDLFGRAGRLTEAYETVKSMP-FPPDAG----VWGTLLGACRLHKNVELAEVASSKL 738
Query: 503 VDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVS 562
+D+ P N Y + +A A +WE+V+ V+ LMKER + IPG S +++ H F
Sbjct: 739 MDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSG 798
Query: 563 EKRHEGIEAVNMMMDELARRFRM 585
+ H + +++ L R+
Sbjct: 799 DVNHPESSHIYSLLNSLLGELRL 821
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 32/290 (11%)
Query: 85 LARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRF 144
+ +LLS S D +FR + DT N +IS Y +S + F++ +
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRA-DTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 145 RFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVA 204
P++ TF L+ S + ++ H ++++
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS------------------------ 370
Query: 205 RVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG 264
++ D+ ++++D Y + +S A +F ++V + MISG+L
Sbjct: 371 -------ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 265 YALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
+L++FR + V + N T+V ++ G LK GR +HG II+ + + A+I
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
DMY KC R+ LA +FER++ R++VSWN+MI +P + +F +M
Sbjct: 484 DMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N++IS++ ++ + A FYF+ L F P+ TF L+ +C V
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSS 166
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
G D V +SLI Y + G + V LFD +L +D WN M++GY + G L S
Sbjct: 167 LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS---- 222
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
+K F M + NA T CV++ C +
Sbjct: 223 ---------------------------VIKGFSVMRMDQISPNAVTFDCVLSVCASKLLI 255
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
G +HG ++ + +L+ MY KC R + A+++F M+ + V+WN MI G+
Sbjct: 256 DLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGY 315
Query: 359 CIHGSPEDGLSLFDEMV 375
G E+ L+ F EM+
Sbjct: 316 VQSGLMEESLTFFYEMI 332
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 51/262 (19%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN+ TF ++ C + I G + H V+ +G D ++NSL+ MY+ CG
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR------- 289
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD A LF +M + VTWN MISG++++ +L
Sbjct: 290 FDD------------------------ASKLFRMMSRADTVTWNCMISGYVQSGLMEESL 325
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
F EM S G+ +A T ++ + + L+ + +H I+R + L +ALID Y
Sbjct: 326 TFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAY 385
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
KCR V +A +F + + ++V + AMI G+ +G D L +F +V
Sbjct: 386 FKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK----------- 434
Query: 388 ESPCADRGVVRLQPDEVTFIGI 409
V++ P+E+T + I
Sbjct: 435 ---------VKISPNEITLVSI 447
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 44/268 (16%)
Query: 122 ISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTF----VP-----LIGSCGNTGCIVSGRKC 172
IS+ K P +A Y +SL R NS F +P L+ +C N + G++
Sbjct: 3 ISSVAKRFAPAIAP--YKKSLPLR---NSSRFLEETIPRRLSLLLQACSNPNLLRQGKQV 57
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
HA +I N ++ MYA CG +F + R
Sbjct: 58 HAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR----------------- 100
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
++ WN +IS F++ AL + +M G+ + +T C+V AC
Sbjct: 101 ------------SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
K + ++ + + + ++LI Y + ++++ +++F+R+ ++ V WN
Sbjct: 149 VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKV 380
M+ G+ G+ + + F M MD++
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVM-RMDQI 235
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 217/500 (43%), Gaps = 31/500 (6%)
Query: 97 CGVDFTLLIFRYFNNPLD---------TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF 147
C + F + F LD F N +IS + + L F
Sbjct: 142 CSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFK 201
Query: 148 PNSYTFVPLIGSC-GNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV 206
P+ YTF L+ +C ++ +V GR HA ++KNG+ S + +NS++ Y G A
Sbjct: 202 PDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMR 261
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
+S+ SWNS++D ++ G+ A +F + P+KN+VTW MI+G+ + + A
Sbjct: 262 ELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQA 321
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
L+ F EM G+ + V+ AC A L G+ +HG +I + + AL+++
Sbjct: 322 LRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNL 381
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y KC ++ A R F + N++LVSWN M+ +HG + L L+D M+
Sbjct: 382 YAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASG-------- 433
Query: 387 DESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
++PD VTFIG+ G F+ M + + H+ CM
Sbjct: 434 ------------IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 447 NLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMY 506
++ G + EA+ + D S S W LL C LG + +K+L
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTDSSNNSS-WETLLGACSTHWHTELGREVSKVLKIAE 540
Query: 507 PKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
P + L +Y +W+ V++ M ER + PG S +++ V F V + H
Sbjct: 541 PSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSH 600
Query: 567 EGIEAVNMMMDELARRFRMP 586
+E ++ ++ L R P
Sbjct: 601 PRLEELSETLNCLQHEMRNP 620
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 136/298 (45%), Gaps = 36/298 (12%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRK 171
LDT NT++++Y + H + F LRF P+ Y+F ++ +C + G + GRK
Sbjct: 33 LDTVAWNTMLTSYSRL-GLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRK 91
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSML--ARDLASWNSMVDGYLEA 229
+ VI++GF + LPV NSLI MY C D A +F M +R+ +W S++ Y+ A
Sbjct: 92 IQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNA 151
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
+A +F MP + WNIMISG L LF+EM K + T ++
Sbjct: 152 EQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLM 211
Query: 290 TAC-GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCK------------------- 329
AC S+ + GR VH +++ S++ +++ Y K
Sbjct: 212 NACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQ 271
Query: 330 ---------CRRV---ELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
C ++ E A VF +N+V+W MI G+ +G E L F EM+
Sbjct: 272 VSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMM 329
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
S + ++G ++SA +FD MP+ + V WN M++ + + A+ LF ++ K
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKC--------- 330
+ + +++ C +K GR + +IR +SL ++ +LIDMY KC
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 331 ------------------------RRVELATRVFERMTNRNLVSWNAMILGHCIHGSPED 366
+ E A VF M R +WN MI GH G E
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 367 GLSLFDEMV 375
LSLF EM+
Sbjct: 188 CLSLFKEML 196
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 238/504 (47%), Gaps = 63/504 (12%)
Query: 83 PFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSL 142
PFLA L+ S+L VD+ +F + N + A + Y++
Sbjct: 112 PFLATKLIGMYSDLGSVDYARKVFDK-TRKRTIYVWNALFRALTLAGHGEEVLGLYWKMN 170
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVS----GRKCHAQVIKNGFDSVLPVQNSLIHMYADC 198
R + +T+ ++ +C + C V+ G++ HA + + G+ S + + +L+ MYA
Sbjct: 171 RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARF 230
Query: 199 GDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFL 258
G V D AS+ +F MP +N+V+W+ MI+ +
Sbjct: 231 GCV-------------DYASY------------------VFGGMPVRNVVSWSAMIACYA 259
Query: 259 KARNPGYALKLFREM--GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSS 316
K AL+ FREM + N+ TMV V+ AC A L++G+ +HG I+R S
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 317 LILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVG 376
L + +AL+ MY +C ++E+ RVF+RM +R++VSWN++I + +HG + + +F+EM+
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 377 MDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLK 436
P VTF+ + G+ F+ M G+K
Sbjct: 380 NGA--------------------SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIK 419
Query: 437 PNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGE 496
P H CM +LL A +DEA K +++M G +W +LL CR +V L E
Sbjct: 420 PQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPG-----PKVWGSLLGSCRIHGNVELAE 474
Query: 497 QFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIV 556
+ ++ L + PKN Y L IYA A W+ V V+KL++ R L +PG ++++ +
Sbjct: 475 RASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKM 534
Query: 557 HNFKVSEKRHEGIEAVNMMMDELA 580
++F ++ + +E ++ + +LA
Sbjct: 535 YSFVSVDEFNPLMEQIHAFLVKLA 558
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 39/261 (14%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N +I + CK + L Q R L P+ T+ LI CG+ + + H ++
Sbjct: 50 NQLIQSLCK--EGKLKQAI--RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
NG D + LI MY+D G V AR +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYAR-------------------------------KV 134
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA-- 296
FD + + WN + A + L L+ +M +G++ + T V+ AC S
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 297 --RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAM 354
L +G+ +H + R S + + T L+DMY + V+ A+ VF M RN+VSW+AM
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 355 ILGHCIHGSPEDGLSLFDEMV 375
I + +G + L F EM+
Sbjct: 255 IACYAKNGKAFEALRTFREMM 275
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 138/553 (24%), Positives = 244/553 (44%), Gaps = 94/553 (16%)
Query: 93 ASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR--FFPNS 150
+++ G+ + +F D+F N++I AY ++ + Y R LR F P++
Sbjct: 20 SASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALY-RDLRKETCFAPDN 78
Query: 151 YTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDS 210
+TF L SC + C+ G + H+Q+ + GF + + V ++ MYA G + AR FD
Sbjct: 79 FTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDE 138
Query: 211 MLARDLASWNSMV--------------------------------DGYLEAGDLSSAHAL 238
M R SW +++ DG++++GD++SA L
Sbjct: 139 MPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL 198
Query: 239 FDVMPDKNLVTW-------------------------------NIMISGFLKARNPGYAL 267
FD M K ++TW N MI G+ + + P +
Sbjct: 199 FDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGI 258
Query: 268 KLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
+LF+EM + L + T++ V+ A + L G H + R + + TA++DM
Sbjct: 259 RLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDM 318
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y KC +E A R+F+ M + + SWNAMI G+ ++G+ L LF M
Sbjct: 319 YSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM------------ 366
Query: 387 DESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
++ +PDE+T + + GR +F M ++ GL H CM
Sbjct: 367 ---------MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMV 416
Query: 447 NLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMY 506
+LL AG + EAE + NM ++ ++ L+ C +D+ E+ K V++
Sbjct: 417 DLLGRAGSLKEAEDLITNMP-----FEPNGIILSSFLSACGQYKDIERAERILKKAVELE 471
Query: 507 PKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
P+N Y L +YA +W++ V+ +M++ + G SL+++ YIV F + H
Sbjct: 472 PQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTH 531
Query: 567 EGIEAVNMMMDEL 579
++++++ +L
Sbjct: 532 PHRRSIHLVLGDL 544
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/552 (25%), Positives = 244/552 (44%), Gaps = 62/552 (11%)
Query: 61 CQTPRHXXXXXXXXXXXXXXRIPFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNT 120
C TP+ + L ++ ++ +D + P + F N
Sbjct: 783 CSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEP-NVFVYNA 841
Query: 121 VISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNG 180
+ + P + Y R LR P+SYT+ L+ + G A + K G
Sbjct: 842 LFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--GESLQAHIWKFG 899
Query: 181 FDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV----------------- 223
F + +Q +LI Y+ G ++ AR +FD M RD +W +MV
Sbjct: 900 FGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLAN 959
Query: 224 --------------DGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKL 269
+GY+ G+L A +LF+ MP K++++W MI G+ + + A+ +
Sbjct: 960 QMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAV 1019
Query: 270 FREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCK 329
F +M G+ + TM V++AC L+ G+ VH ++ + + +AL+DMY K
Sbjct: 1020 FYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSK 1079
Query: 330 CRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDES 389
C +E A VF + +NL WN++I G HG ++ L +F +M M+ VK
Sbjct: 1080 CGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM-EMESVK-------- 1130
Query: 390 PCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLL 449
P+ VTF+ + GR ++ M D + + N H M +L
Sbjct: 1131 -----------PNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLF 1179
Query: 450 ANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGE-QFAKLLVDMYPK 508
+ AGL+ EA + + NM + +++W LL CR +++ + E F KL+V + P
Sbjct: 1180 SKAGLIYEALELIGNM-----EFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMV-LEPM 1233
Query: 509 NLACYQFLLIIYAVAAQWENVSTVQKLMKERRL-GIIPGSSLVDLKYIVHNFKVSEKRHE 567
N Y L+ +YA +W +V+ ++ M+E + I PG+S + + H F ++K H
Sbjct: 1234 NSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHS 1293
Query: 568 GIEAVNMMMDEL 579
+ V +++DE+
Sbjct: 1294 ASDEVCLLLDEI 1305
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 222/498 (44%), Gaps = 58/498 (11%)
Query: 85 LARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCV-NTVISAYCKSHDPHLAQVFYFRSLR 143
+A T +S +D L+F + T N++ AY + A Y LR
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR 249
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV 203
F P+ TF+ L SC N + GR H+ I G D + N+ I MY+
Sbjct: 250 EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS------- 302
Query: 204 ARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP 263
++ D SA LFD+M + V+W +MISG+ + +
Sbjct: 303 ------------------------KSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 338
Query: 264 GYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHG-SIIRMFSRSSLILDTA 322
AL LF M G K + T++ +++ CG+ L+ G+ + + I R ++++ A
Sbjct: 339 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA 398
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
LIDMY KC + A +F+ + +V+W MI G+ ++G + L LF +M+ +D
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD---- 454
Query: 383 EVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHL 442
+P+ +TF+ + G YF M V+ + P H
Sbjct: 455 ----------------YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY 498
Query: 443 WCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLL 502
CM +LL G ++EA + +RNM+ ++ +W LL C+ R+V + EQ A+ L
Sbjct: 499 SCMVDLLGRKGKLEEALELIRNMSA-----KPDAGIWGALLNACKIHRNVKIAEQAAESL 553
Query: 503 VDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVS 562
++ P+ A Y + IYA A W+ + ++ +MK+R + PG S++ + H+F V
Sbjct: 554 FNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVG 613
Query: 563 EKRHEGIEAVNMMMDELA 580
E H E + ++ L+
Sbjct: 614 EHGHVENEVIYFTLNGLS 631
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%)
Query: 250 WNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII 309
WN+ I + +P +L LFREM G + N T V AC R A + VH +I
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 310 RMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLS 369
+ S + + TA +DM+ KC V+ A +VFERM R+ +WNAM+ G C G + S
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 370 LFDEM 374
LF EM
Sbjct: 140 LFREM 144
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 35/256 (13%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSL-RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
N I +DP + + FR + R F PN++TF + +C + HA +I
Sbjct: 21 NLQIREAVNRNDP-VESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
K+ F S + V + + M+ C V A +F+ M RD +WN+M+ G+ ++G
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH------ 133
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSAR 297
DK A LFREM + ++ T++ ++ +
Sbjct: 134 -----TDK--------------------AFSLFREMRLNEITPDSVTVMTLIQSASFEKS 168
Query: 298 LKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT--NRNLVSWNAMI 355
LK ++H IR+ + + I Y KC ++ A VFE + +R +VSWN+M
Sbjct: 169 LKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF 228
Query: 356 LGHCIHGSPEDGLSLF 371
+ + G D L+
Sbjct: 229 KAYSVFGEAFDAFGLY 244
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 217/467 (46%), Gaps = 65/467 (13%)
Query: 119 NTVISAY--CKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQV 176
T+ISAY CK H L + LR PN YT+ ++ SC + R H +
Sbjct: 131 TTMISAYSKCKIHQKALELLVLM--LRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGI 185
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
IK G +S + V+++LI ++A G+ + A
Sbjct: 186 IKEGLESDVFVRSALIDVFAKLGEPE-------------------------------DAL 214
Query: 237 ALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA 296
++FD M + + WN +I GF + AL+LF+ M G T+ V+ AC A
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMIL 356
L+ G H I++ LIL+ AL+DMYCKC +E A RVF +M R++++W+ MI
Sbjct: 275 LLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 357 GHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXX 416
G +G ++ L LF+ M K G +P+ +T +G+
Sbjct: 333 GLAQNGYSQEALKLFERM----KSSGT----------------KPNYITIVGVLFACSHA 372
Query: 417 XXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRES 476
G YF+ M ++G+ P H CM +LL AG +D+A K L M + ++
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM-----ECEPDA 427
Query: 477 MLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLM 536
+ W LL CR +R++ L E AK ++ + P++ Y L IYA + +W++V ++ M
Sbjct: 428 VTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRM 487
Query: 537 KERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRF 583
++R + PG S +++ +H F + + H I V+ +++L R
Sbjct: 488 RDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 36/248 (14%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N++I + ++ +A + R R F T ++ +C + G + H
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
++K +D L + N+L+ MY CG ++ A +F+ M RD+ +W++M+ G + G
Sbjct: 284 VHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG--- 338
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
ALKLF M S G K N T+V V+ AC
Sbjct: 339 ----------------------------YSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTA-LIDMYCKCRRVELATRVFERMT-NRNLVSW 351
+ L++G S+ +++ + +ID+ K +++ A ++ M + V+W
Sbjct: 371 HAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTW 430
Query: 352 NAMILGHC 359
+ LG C
Sbjct: 431 RTL-LGAC 437
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 240/510 (47%), Gaps = 68/510 (13%)
Query: 88 TLLSRASNLCGVDFTLLIFRYFNNPLDTFCV--NTVISAYCKSH-DPHLAQVFY-FRSLR 143
+L A + CG F L + F+ L+ V NT+I Y ++ + +F R+
Sbjct: 100 NVLINAYSKCG--FVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG 157
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV 203
F+F + +T ++ +CG + +K H +K D L V +L+ +YA CG ++
Sbjct: 158 FKF--SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK- 214
Query: 204 ARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP 263
A +F+ M DK+ VTW+ M++G+++ +N
Sbjct: 215 ------------------------------DAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 264 GYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTAL 323
AL L+R + L+ N T+ V+ AC A L EG+ +H I + S++ + ++
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 324 IDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGE 383
+DMY KC + + +F + +NL WN +I G H P++ + LF++M + G
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM----QQDG- 359
Query: 384 VEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLW 443
+ P+EVTF + GR +FK M +GL PN H
Sbjct: 360 ---------------MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 444 CMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLV 503
CM ++L AGL+ EA + ++++ FD S +W +LLA CR +++ L E A+ L
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIP-FDPTAS----IWGSLLASCRVYKNLELAEVAAEKLF 459
Query: 504 DMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSE 563
++ P+N + L IYA QWE ++ +KL+++ + + G S +D+K VH F V E
Sbjct: 460 ELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGE 519
Query: 564 KRHEGIEAVNMMMDELARRFR----MPSVD 589
H I + +D L +FR PSV+
Sbjct: 520 SGHPRIREICSTLDNLVIKFRKFGYKPSVE 549
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 31/246 (12%)
Query: 147 FPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV 206
F N ++ C G ++ + CH ++I+ + + + N LI+ Y+ CG V++AR
Sbjct: 58 FSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQ 117
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
+FD ML R L SWN+M+ Y + R A
Sbjct: 118 VFDGMLERSLVSWNTMIGLY-------------------------------TRNRMESEA 146
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
L +F EM + G K + T+ V++ACG + E + +H ++ +L + TAL+D+
Sbjct: 147 LDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDL 206
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y KC ++ A +VFE M +++ V+W++M+ G+ + + E+ L L+ M + + +
Sbjct: 207 YAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTL 266
Query: 387 DESPCA 392
CA
Sbjct: 267 SSVICA 272
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 233/502 (46%), Gaps = 59/502 (11%)
Query: 86 ARTLLSRASNLC----GVDFTLLIFRYFNNPL-DTFCVNTVISAYCKSHDPHLAQVFYFR 140
+R+LL++ L + +T L+F + PL D F N+VI + K P +Y R
Sbjct: 40 SRSLLTKLITLACSARAIAYTHLLF--LSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRR 97
Query: 141 SLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGD 200
L P++YTF +I SC + + G+ H + +GF VQ +L+ Y+ CGD
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKA 260
++ AR +FD M + + +WNS+V G+ + G + D+
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNG-----------LADE--------------- 191
Query: 261 RNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD 320
A+++F +M G + ++ T V +++AC ++ + G VH II ++ L
Sbjct: 192 -----AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG 246
Query: 321 TALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
TALI++Y +C V A VF++M N+ +W AMI + HG + + LF++M
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM------ 300
Query: 381 KGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFA 440
E D P P+ VTF+ + GRS +K+MT + L P
Sbjct: 301 ----EDDCGPI---------PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVE 347
Query: 441 HLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAK 500
H CM ++L AG +DEA K + + + LW +L C+ R+ LG + AK
Sbjct: 348 HHVCMVDMLGRAGFLDEAYKFIHQLDA--TGKATAPALWTAMLGACKMHRNYDLGVEIAK 405
Query: 501 LLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFK 560
L+ + P N + L IYA++ + + VS ++ M L G S+++++ + F
Sbjct: 406 RLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFS 465
Query: 561 VSEKRHEGIEAVNMMMDELARR 582
+ ++ H+ + ++ L R
Sbjct: 466 MGDESHQETGEIYRYLETLISR 487
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 238/522 (45%), Gaps = 64/522 (12%)
Query: 84 FLARTLLSRAS-NLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSL 142
F++ L+ S N C + +L R+ D N +++ Y +SHD H +
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFERH---NFDLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
+ + +T + +CG I G++ HA IK+G+D L V + ++ MY CGD+
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
A+ FDS+ D +W +M+ G +E G+
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGE------------------------------- 598
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
A +F +M +G+ + T+ + A L++GR +H + +++ + + T+
Sbjct: 599 EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTS 658
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
L+DMY KC ++ A +F+R+ N+ +WNAM++G HG ++ L LF +M +
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG---- 714
Query: 383 EVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHL 442
++PD+VTFIG+ + + M +G+KP H
Sbjct: 715 ----------------IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 443 WCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLL 502
C+A+ L AGLV +AE + +M+ M + ++ LLA CR + D G++ A L
Sbjct: 759 SCLADALGRAGLVKQAENLIESMS-----MEASASMYRTLLAACRVQGDTETGKRVATKL 813
Query: 503 VDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVS 562
+++ P + + Y L +YA A++W+ + + +MK ++ PG S +++K +H F V
Sbjct: 814 LELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVD 873
Query: 563 EKRHEGIEAVNMMMDELARRFR----MPSVDSGQSSVRHKEN 600
++ + E + + ++ R + +P D V +E
Sbjct: 874 DRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEK 915
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 149/335 (44%), Gaps = 44/335 (13%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHD---PHLAQVFY-F 139
FL L+S S + + +F + D N++++AY +S + ++ Q F F
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDR-DLVSWNSILAAYAQSSECVVENIQQAFLLF 133
Query: 140 RSLRFRF-FPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADC 198
R LR + + T P++ C ++G + + H K G D V +L+++Y
Sbjct: 134 RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKF 193
Query: 199 GDVQVARVLFDSMLARDLASWNSMVDGYLEAG------DLSSAHALFDVMPDK------- 245
G V+ +VLF+ M RD+ WN M+ YLE G DLSSA + P++
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253
Query: 246 -------------------------NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
++ N +S +L + LK F +M ++
Sbjct: 254 RISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF 340
+ T + ++ + L G+ VH +++ L + +LI+MYCK R+ A VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 341 ERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+ M+ R+L+SWN++I G +G + + LF +++
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 408
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 152 TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM 211
TF+ ++ + + G++ H +K G D +L V NSLI+MY AR +FD+M
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
RDL SWNS++ G + G A LF ++L R
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLF---------------------------MQLLR 409
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEG----RSVHGSIIRMFSRSSLILDTALIDMY 327
GLK + TM V+ A ++ L EG + VH I++ + S + TALID Y
Sbjct: 410 ----CGLKPDQYTMTSVLKA---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ R ++ A +FER N +LV+WNAM+ G+ L LF M
Sbjct: 463 SRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 247/500 (49%), Gaps = 31/500 (6%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLA-QVFYFRSL 142
+++ +L+ ++L ++ T +F D N +IS+Y + A VF S
Sbjct: 82 YVSNSLMGMYASLGKIEITHKVFDEMPQR-DVVSWNGLISSYVGNGRFEDAIGVFKRMSQ 140
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
+ T V + +C + G + + V+ F+ + + N+L+ M+ CG +
Sbjct: 141 ESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLD 199
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
AR +FDSM +++ W SMV GY+ G + A LF+ P K++V W M++G+++
Sbjct: 200 KARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNR 259
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
AL+LFR M + G++ + +V ++T C ++ L++G+ +HG I ++ TA
Sbjct: 260 FDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA 319
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
L+DMY KC +E A VF + R+ SW ++I G ++G L L+ EM +
Sbjct: 320 LVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVG---- 375
Query: 383 EVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHL 442
VRL D +TF+ + GR F MT+ ++P H
Sbjct: 376 --------------VRL--DAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC 419
Query: 443 WCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESM--LWANLLALCRFRRDVYLGEQFAK 500
C+ +LL AGL+DEAE+ + M G+ S E++ ++ +LL+ R +V + E+ A+
Sbjct: 420 SCLIDLLCRAGLLDEAEELIDKMR---GE-SDETLVPVYCSLLSAARNYGNVKIAERVAE 475
Query: 501 LLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFK 560
L + + + + L +YA A +WE+V+ V++ MK+ + PG S +++ + H F
Sbjct: 476 KLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFI 535
Query: 561 VSEK--RHEGIEAVNMMMDE 578
V + H ++ +N M+ +
Sbjct: 536 VGDDLLSHPKMDEINSMLHQ 555
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 32/235 (13%)
Query: 139 FRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYAD 197
F LR + +P+++T ++ S G ++ G K H +K G + V NSL+ MYA
Sbjct: 34 FGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYAS 93
Query: 198 CGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGF 257
G +++ +FD M RD+ SWN ++ Y+ G A +F M ++
Sbjct: 94 LGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQES----------- 142
Query: 258 LKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSL 317
LK + T+V ++AC L+ G ++ ++ F S
Sbjct: 143 -------------------NLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR 183
Query: 318 ILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFD 372
I AL+DM+CKC ++ A VF+ M ++N+ W +M+ G+ G ++ LF+
Sbjct: 184 I-GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFE 237
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 246 NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVH 305
+L+ +N M+ ++ L LF E+ GL + T+ V+ + GR ++ EG VH
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 306 GSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPE 365
G ++ + +L+ MY ++E+ +VF+ M R++VSWN +I + +G E
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 366 DGLSLFDEM 374
D + +F M
Sbjct: 130 DAIGVFKRM 138
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 211/430 (49%), Gaps = 29/430 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D T+I + + A V+Y LR P+ V L+ + + G + H
Sbjct: 269 DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLH 328
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
++K GFD +Q ++IH YA D+++A F++ + +AS N+++ G+++ G +
Sbjct: 329 GTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVE 388
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREM-GSVGLKGNATTMVCVVTAC 292
A +FD DK++ +WN MISG+ ++ +P AL LFREM S +K +A TMV V +A
Sbjct: 389 QAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAI 448
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN---RNLV 349
L+EG+ H + + L A+IDMY KC +E A +F + N +
Sbjct: 449 SSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTIS 508
Query: 350 SWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGI 409
WNA+I G HG + L L+ ++ + ++P+ +TF+G+
Sbjct: 509 PWNAIICGSATHGHAKLALDLYSDLQSLP--------------------IKPNSITFVGV 548
Query: 410 XXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFD 469
G++YF+ M G++P+ H CM +LL AG ++EA++ ++ M
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP--- 605
Query: 470 GDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENV 529
+ + M+W LL+ R +V + E A L + P + C L +YA A +WE+V
Sbjct: 606 --VKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDV 663
Query: 530 STVQKLMKER 539
+ V++ M+ R
Sbjct: 664 ALVREEMRTR 673
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 131/236 (55%)
Query: 152 TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM 211
V +GSC ++ + GR+ H +V+K+G DS + NS+++MYA C + A +F
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
D AS+N MVDGY+ + L A LFDVMP+++ V++ +I G+ + A++LFR
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
EM ++G+ N T+ V++AC + + R + I++ + + T L+ MYC C
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
++ A ++F+ M RNLV+WN M+ G+ G E LFD++ D V ID
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 146/299 (48%), Gaps = 35/299 (11%)
Query: 117 CVN--TVISAYCKSHDPHLAQVFYFRSLR-FRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
CV+ T+I Y +++ A FR +R N T +I +C + G I R
Sbjct: 138 CVSYTTLIKGYAQNNQWSEAMEL-FREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQ 196
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+ IK + + V +L+HMY C ++ AR LFD M R+L +WN M++GY +AG +
Sbjct: 197 SLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIE 256
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
A LFD + +K++V+W MI G L+ AL + EM G+K + MV +++A
Sbjct: 257 QAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASA 316
Query: 294 RSARLKEGRSVHGSIIRM------FSRSSLI-------------------------LDTA 322
RS +G +HG+I++ F ++++I A
Sbjct: 317 RSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNA 376
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVK 381
LI + K VE A VF++ ++++ SWNAMI G+ SP+ L LF EM+ +VK
Sbjct: 377 LIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVK 435
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 226/487 (46%), Gaps = 58/487 (11%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIG 158
+++ IFR ++P TF NT+I Y A FY ++ P+++T+ L+
Sbjct: 82 MNYAASIFRGIDDPC-TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 159 SCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLAS 218
+C I G++ H QV K G ++ + VQNSLI+MY C
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRC-------------------- 180
Query: 219 WNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGS-VG 277
G++ + A+F+ + K +W+ M+S L LFR M S
Sbjct: 181 -----------GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETN 229
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELAT 337
LK + MV + AC + L G S+HG ++R S ++I+ T+L+DMY KC ++ A
Sbjct: 230 LKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKAL 289
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVV 397
+F++M RN ++++AMI G +HG E L +F +M+
Sbjct: 290 HIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEG------------------- 330
Query: 398 RLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDE 457
L+PD V ++ + GR F +M ++P H C+ +LL AGL++E
Sbjct: 331 -LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 458 AEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLL 517
A + ++++ + + ++W L+ CR R+++ LG+ A+ L+ + N Y +
Sbjct: 390 ALETIQSIP-----IEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 518 IIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMD 577
+Y+ W++V+ + + + L PG S+V+LK H F ++ H + + M+
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLH 504
Query: 578 ELARRFR 584
++ + +
Sbjct: 505 QMEWQLK 511
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 204/426 (47%), Gaps = 56/426 (13%)
Query: 157 IGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDL 216
+ +C + G++ HAQ +GF S LP QN+L+ +Y+ CG ++ + + F+
Sbjct: 598 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT----- 652
Query: 217 ASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV 276
EAGD + WN ++SGF ++ N AL++F M
Sbjct: 653 -----------EAGDN---------------IAWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 277 GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELA 336
G+ N T V A +A +K+G+ VH I + S + ALI MY KC + A
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Query: 337 TRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGV 396
+ F ++ +N VSWNA+I + HG + L FD+M+ +
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN------------------ 788
Query: 397 VRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVD 456
++P+ VT +G+ G +YF+ M +GL P H C+ ++L AGL+
Sbjct: 789 --VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLS 846
Query: 457 EAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFL 516
A++ ++ M + ++++W LL+ C +++ +GE A L+++ P++ A Y L
Sbjct: 847 RAKEFIQEMP-----IKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 517 LIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMM 576
+YAV+ +W+ ++ MKE+ + PG S +++K +H+F V ++ H + ++
Sbjct: 902 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYF 961
Query: 577 DELARR 582
+L +R
Sbjct: 962 QDLTKR 967
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 32/237 (13%)
Query: 139 FRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYAD 197
FR ++ PN YT+ ++ +C G + G + H+Q+IK F V + LI MYA
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537
Query: 198 CGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGF 257
G + A W+ ++ K++V+W MI+G+
Sbjct: 538 LGKLDTA--------------WDILIR-----------------FAGKDVVSWTTMIAGY 566
Query: 258 LKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSL 317
+ AL FR+M G++ + + V+AC LKEG+ +H S L
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 318 ILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
AL+ +Y +C ++E + FE+ + ++WNA++ G G+ E+ L +F M
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 31/290 (10%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D NT+I+ + A + R P+S T L+ +C G + G++ H
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 412
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
A K GF S ++ +L+++YA C D++ A +D +LE
Sbjct: 413 AYTTKLGFASNNKIEGALLNLYAKCADIETA------------------LDYFLET---- 450
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+N+V WN+M+ + + + ++FR+M + N T ++ C
Sbjct: 451 ---------EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
R L+ G +H II+ + + + + LIDMY K +++ A + R +++VSW
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTT 561
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDE 403
MI G+ + + L+ F +M+ EV + + A G+ L+ +
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P Y F ++ +C + G + H V+K GF S V N+L+ +Y
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY------------ 333
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
G+L SA +F M ++ VT+N +I+G + A+
Sbjct: 334 -------------------FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
+LF+ M GL+ ++ T+ +V AC L G+ +H ++ S+ ++ AL+++Y
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
KC +E A F N+V WN M++ + + + +F +M
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 148 PNSYTFVPLIGSCGNT-GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV 206
PN T L+ C T G + GRK H+Q++K G DS + L Y GD+ A
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFK 141
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
+FD M R + +WN M+ K L + N++ G
Sbjct: 142 VFDEMPERTIFTWNKMI---------------------KELASRNLI----------GEV 170
Query: 267 LKLFREMGSVGLKGNATTMVCVVTAC-GRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
LF M S + N T V+ AC G S +H I+ R S ++ LID
Sbjct: 171 FGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLID 230
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+Y + V+LA RVF+ + ++ SW AMI G + + + LF +M
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N ++S + +S + A + R R N++TF + + T + G++ H
Sbjct: 656 DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH 715
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
A + K G+DS V N+LI MYA CG + A F + ++ SWN++++ Y + G S
Sbjct: 716 AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGS 775
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNP----GYALKLFREMGS-VGLKGNATTMVCV 288
A FD M N+ ++ + G L A + + F M S GL VCV
Sbjct: 776 EALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCV 835
Query: 289 VTACGRSARLKEGR 302
V R+ L +
Sbjct: 836 VDMLTRAGLLSRAK 849
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 34/245 (13%)
Query: 133 LAQVF--YFRSLRFRFFPNSYTFVPLIGSC-GNTGCIVSGRKCHAQVIKNGFDSVLPVQN 189
+ +VF + R + PN TF ++ +C G + + HA+++ G V N
Sbjct: 167 IGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCN 226
Query: 190 SLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVT 249
LI +Y+ G V +AR +FD + K+ +
Sbjct: 227 PLIDLYSRNGFVDLAR-------------------------------RVFDGLRLKDHSS 255
Query: 250 WNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII 309
W MISG K A++LF +M +G+ V++AC + L+ G +HG ++
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 310 RMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLS 369
++ S + AL+ +Y + A +F M+ R+ V++N +I G G E +
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 370 LFDEM 374
LF M
Sbjct: 376 LFKRM 380
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 220/474 (46%), Gaps = 30/474 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D N++IS Y +S + Y L F PN T + + +CG + ++ G +
Sbjct: 197 DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEV 256
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H ++I+N L + N++I YA CG + AR LFD M +D ++ +++ GY+ G +
Sbjct: 257 HKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLV 316
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
A ALF M L TWN MISG ++ + + FREM G + N T+ ++ +
Sbjct: 317 KEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSL 376
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
S+ LK G+ +H IR + +++ + T++ID Y K + A RVF+ +R+L++W
Sbjct: 377 TYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWT 436
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX 412
A+I + +HG + SLFD+M C + +PD+VT +
Sbjct: 437 AIITAYAVHGDSDSACSLFDQM---------------QC-----LGTKPDDVTLTAVLSA 476
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
+ F M + ++P H CM ++L+ AG + +A + + M +
Sbjct: 477 FAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP-----I 531
Query: 473 SRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTV 532
+ +W LL D+ + L +M P+N Y + +Y A +WE V
Sbjct: 532 DPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMV 591
Query: 533 QKLMKERRLGIIPGSSLVDLKYIVHNFKVS----EKRHEGIEAVNMMMDELARR 582
+ MK L IPG+S ++ + + +F E+ E E + +++ ++ +
Sbjct: 592 RNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDK 645
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 30/206 (14%)
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLE 228
R+ H VI+ GFDS + V N +I Y C +++ AR +FD M RD+ SWNSM+ GY +
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQ 210
Query: 229 AGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCV 288
+G ++ M + K N T++ V
Sbjct: 211 SGSFEDCKKMYKAM------------------------------LACSDFKPNGVTVISV 240
Query: 289 VTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL 348
ACG+S+ L G VH +I + L L A+I Y KC ++ A +F+ M+ ++
Sbjct: 241 FQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDS 300
Query: 349 VSWNAMILGHCIHGSPEDGLSLFDEM 374
V++ A+I G+ HG ++ ++LF EM
Sbjct: 301 VTYGAIISGYMAHGLVKEAMALFSEM 326
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
D+ LA L S+ + D + +A H +FD + +N ++N ++ + A
Sbjct: 56 DNFLASKLISFYTRQDRFRQA-----LH-VFDEITVRNAFSYNALLIAYTSREMYFDAFS 109
Query: 269 LFRE-MGSVGLKGNAT-----TMVCVVTACGRSARLKEG---RSVHGSIIRMFSRSSLIL 319
LF +GS +A ++ CV+ A G R VHG +IR S + +
Sbjct: 110 LFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFV 169
Query: 320 DTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDK 379
+I Y KC +E A +VF+ M+ R++VSWN+MI G+ GS ED ++ M+
Sbjct: 170 GNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSD 229
Query: 380 VK 381
K
Sbjct: 230 FK 231
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 218/475 (45%), Gaps = 58/475 (12%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIG 158
V + I +P + F N+VI AY S P +A + L FP+ Y+F ++
Sbjct: 90 VSYAHSILNRIGSP-NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLK 148
Query: 159 SCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR------------- 205
+C GR+ H IK+G + + V+N+L+++Y G ++AR
Sbjct: 149 ACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS 208
Query: 206 ------------------VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNL 247
LFD M R++ SWN M+ GY AG + A +FD MP +++
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 248 VTWNIMISGFLKARNPGYALKLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHG 306
V+WN M++ + L++F +M K + T+V V++AC L +G VH
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 307 SIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPED 366
I + L TAL+DMY KC +++ A VF + R++ +WN++I +HG +D
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 367 GLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYF 426
L +F EMV +G +P+ +TFIG+ R F
Sbjct: 389 ALEIFSEMV----YEG----------------FKPNGITFIGVLSACNHVGMLDQARKLF 428
Query: 427 KQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALC 486
+ M+ V+ ++P H CM +LL G ++EAE+ + + + S+L +LL C
Sbjct: 429 EMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA-----SILLESLLGAC 483
Query: 487 RFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRL 541
+ + E+ A L+++ ++ + Y + +YA +WE V ++ M+ R+
Sbjct: 484 KRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERV 538
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%)
Query: 228 EAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVC 287
E +S AH++ + + N T N +I + + P AL +FREM + + +
Sbjct: 86 EPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTF 145
Query: 288 VVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRN 347
V+ AC +EGR +HG I+ + + ++ L+++Y + E+A +V +RM R+
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRD 205
Query: 348 LVSWNAMILGHCIHGSPEDGLSLFDEM 374
VSWN+++ + G ++ +LFDEM
Sbjct: 206 AVSWNSLLSAYLEKGLVDEARALFDEM 232
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 197/415 (47%), Gaps = 56/415 (13%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
++Y + SCG +G H +K GF S + + +SL+ +Y D G+V+
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE------ 172
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
+A+ +F+ MP++N+V+W MISGF + LK
Sbjct: 173 -------------------------NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLK 207
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
L+ +M N T +++AC S L +GRSVH + M +S L + +LI MYC
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
KC ++ A R+F++ +N+++VSWN+MI G+ HG + LF+ M+ K
Sbjct: 268 KCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTK------- 320
Query: 389 SPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANL 448
PD +T++G+ GR +F M + GLKP H C+ +L
Sbjct: 321 ------------PDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDL 367
Query: 449 LANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPK 508
L GL+ EA + + NM M S++W +LL CR DV+ G + A+ + + P
Sbjct: 368 LGRFGLLQEALELIENMP-----MKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPD 422
Query: 509 NLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSE 563
A + L +YA W+ +TV+KLMK++ L PG S +++ V FK +
Sbjct: 423 CAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAED 477
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN YTF L+ +C +G + GR H Q + G S L + NSLI MY CGD++ A +
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD +D+ SWNSM+ GY + G A LF++M K+
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKS--------------------- 317
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
G K +A T + V+++C + +KEGR + + L + L+D+
Sbjct: 318 ---------GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLL 368
Query: 328 CKCRRVELATRVFERMTNR-NLVSWNAMILGHCIHGSPEDGLSLFDE 373
+ ++ A + E M + N V W +++ +HG G+ +E
Sbjct: 369 GRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE 415
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 210/433 (48%), Gaps = 26/433 (6%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N++IS Y +++ + + F +R +S T +I +C G + +G++ H K
Sbjct: 288 NSMISGYI-ANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACK 346
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
G + V ++L+ MY+ CG A LF + + D NSM+ Y G + A +
Sbjct: 347 FGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRV 406
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
F+ + +K+L++WN M +GF + L+ F +M + L + ++ V++AC + L
Sbjct: 407 FERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSL 466
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
+ G V + S ++ ++LID+YCKC VE RVF+ M + V WN+MI G+
Sbjct: 467 ELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGY 526
Query: 359 CIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXX 418
+G + + LF +M V ++P ++TF+ +
Sbjct: 527 ATNGQGFEAIDLFKKM--------------------SVAGIRPTQITFMVVLTACNYCGL 566
Query: 419 XXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESML 478
GR F+ M G P+ H CM +LLA AG V+EA + M FD D S +
Sbjct: 567 VEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP-FDVDGS----M 621
Query: 479 WANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKE 538
W+++L C +G++ A+ ++++ P+N Y L I+A + WE+ + V+KLM+E
Sbjct: 622 WSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRE 681
Query: 539 RRLGIIPGSSLVD 551
+ PGSS D
Sbjct: 682 NNVTKNPGSSWTD 694
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 66/285 (23%)
Query: 153 FVPLIGSCGNTGCIVSGRKCHAQVIKNGF-DSVLPVQNSLIHMYADCGDVQVARVLFDSM 211
+V L+ SC + R+ + ++K GF S++ V N L+ MY+ G + +AR LFD M
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 212 LARDLASWNSMVDGYL-------------------------------EAGDLSSAHALFD 240
R+ SWN+M++GY+ +AG+LS A LF+
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 241 VMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKE 300
MP+K++VT N ++ G++ AL+LF+E+ +A T+ V+ AC LK
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKC 205
Query: 301 GRSVHG---------------SIIRMFSR------SSLILD----------TALIDMYCK 329
G+ +H S++ ++++ +S +L+ +ALI Y
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 330 CRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
C RV + +F+R +NR ++ WN+MI G+ + + L LF+EM
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM 310
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/558 (25%), Positives = 247/558 (44%), Gaps = 61/558 (10%)
Query: 43 GKPPPFTRHHFQTLLQSSCQTPRHXXXXXXXXXXXXXXRIPFLARTLLSRASNLCGVDFT 102
K P T+ LL++S P+ L LL + + +
Sbjct: 3 AKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYA 62
Query: 103 LLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGN 162
+F + P F NT+ Y ++ P + + Y + P+ +T+ ++ +
Sbjct: 63 RQVFDEMHKP-RIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 163 TGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSM 222
G G HA V+K GF + V L+ MY
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMY--------------------------- 154
Query: 223 VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
++ G+LSSA LF+ M K+LV WN ++ ++ N AL+ F +M + ++ ++
Sbjct: 155 ----MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDS 210
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T+V +++ACG+ L+ G ++ + ++I++ A +DM+ KC E A +FE
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE 270
Query: 343 MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPD 402
M RN+VSW+ MI+G+ ++G + L+LF M + G L+P+
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSREALTLFTTM-----------------QNEG---LRPN 310
Query: 403 EVTFIGIXXXXXXXXXXXXGRSYFKQM--TDVFGLKPNFAHLWCMANLLANAGLVDEAEK 460
VTF+G+ G+ YF M ++ L+P H CM +LL +GL++EA +
Sbjct: 311 YVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYE 370
Query: 461 CLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLI-I 519
++ M + ++ +W LL C RD+ LG++ A +LV+ P ++ Y LL I
Sbjct: 371 FIKKMP-----VEPDTGIWGALLGACAVHRDMILGQKVADVLVETAP-DIGSYHVLLSNI 424
Query: 520 YAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDEL 579
YA A +W+ V V+ M++ + S V+ + +H F +K H +A+ +DE+
Sbjct: 425 YAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEI 484
Query: 580 ARRFRMPSVDSGQSSVRH 597
++ R SV H
Sbjct: 485 LKKIRKMGYVPDTCSVFH 502
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 222/483 (45%), Gaps = 57/483 (11%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
++SAY ++ +P A + + + P+ V ++ + + GR HA V+K
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
G + + SL MYA CG V A++ L
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQVATAKI-------------------------------L 279
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
FD M NL+ WN MISG+ K A+ +F EM + ++ + ++ ++AC + L
Sbjct: 280 FDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
++ RS++ + R R + + +ALIDM+ KC VE A VF+R +R++V W+AMI+G+
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY 399
Query: 359 CIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXX 418
+HG + +SL+ M +RG V P++VTF+G+
Sbjct: 400 GLHGRAREAISLYRAM------------------ERGGV--HPNDVTFLGLLMACNHSGM 439
Query: 419 XXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESML 478
G +F +M D + P H C+ +LL AG +D+A + ++ M G +
Sbjct: 440 VREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG-----VTV 493
Query: 479 WANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKE 538
W LL+ C+ R V LGE A+ L + P N Y L +YA A W+ V+ V+ MKE
Sbjct: 494 WGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKE 553
Query: 539 RRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRMPSVDSGQSSVRHK 598
+ L G S V+++ + F+V +K H E + ++ + R + + + + H
Sbjct: 554 KGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHD 613
Query: 599 ENN 601
N+
Sbjct: 614 LND 616
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 152/327 (46%), Gaps = 32/327 (9%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
FL L+ +S+ + F +F P F N +I Y +++ A + Y
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRP-QIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV 203
R P+S+TF L+ +C + GR HAQV + GFD+ + VQN LI +YA C +
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 204 ARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP 263
AR +F+ + +P++ +V+W ++S + + P
Sbjct: 173 ARTVFEGL-----------------------------PLPERTIVSWTAIVSAYAQNGEP 203
Query: 264 GYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTAL 323
AL++F +M + +K + +V V+ A LK+GRS+H S+++M L +L
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 324 IDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGE 383
MY KC +V A +F++M + NL+ WNAMI G+ +G + + +F EM+ D
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323
Query: 384 VEIDE--SPCADRGVVRLQPDEVTFIG 408
+ I S CA G + ++G
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVG 350
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 219/474 (46%), Gaps = 48/474 (10%)
Query: 106 FRYFNN--PLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNT 163
FR F+ D N +I+A+ ++ + + LR R P+ +TF ++ +C
Sbjct: 437 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TG 495
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV 223
G + G + H+ ++K+G S V SLI MY+ CG ++ A + R + V
Sbjct: 496 GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR------ANV 549
Query: 224 DGYLEAGDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
G +E + M +K L V+WN +ISG++ A LF M +G+
Sbjct: 550 SGTMEE---------LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
+ T V+ C A G+ +H +I+ +S + + + L+DMY KC + + +
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 660
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRL 399
FE+ R+ V+WNAMI G+ HG E+ + LF+ M+ + +
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI--------------------LENI 700
Query: 400 QPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAE 459
+P+ VTFI I G YF M +GL P H M ++L +G V A
Sbjct: 701 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 760
Query: 460 KCLRNMAKFDGDMSRESMLWANLLALCRFRR-DVYLGEQFAKLLVDMYPKNLACYQFLLI 518
+ +R M F+ D ++W LL +C R +V + E+ L+ + P++ + Y L
Sbjct: 761 ELIREMP-FEAD----DVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSN 815
Query: 519 IYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAV 572
+YA A WE VS +++ M+ +L PG S V+LK +H F V +K H E +
Sbjct: 816 VYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEI 869
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 133/249 (53%), Gaps = 9/249 (3%)
Query: 135 QVFYFRSLRFRFFPN---------SYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVL 185
++ Y R F +F + + F + C G + G++ HA +I +GF
Sbjct: 24 KISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTT 83
Query: 186 PVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDK 245
V N L+ +Y + D A ++FD M RD+ SWN M++GY ++ D+ A++ F++MP +
Sbjct: 84 FVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVR 143
Query: 246 NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVH 305
++V+WN M+SG+L+ ++++F +MG G++ + T ++ C G +H
Sbjct: 144 DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIH 203
Query: 306 GSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPE 365
G ++R+ + ++ +AL+DMY K +R + RVF+ + +N VSW+A+I G +
Sbjct: 204 GIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 263
Query: 366 DGLSLFDEM 374
L F EM
Sbjct: 264 LALKFFKEM 272
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 131/312 (41%), Gaps = 61/312 (19%)
Query: 153 FVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSML 212
+ ++ SC + G + HA +K+ F + V+ + + MYA C ++Q A++L
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL----- 338
Query: 213 ARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFRE 272
FD + N ++N MI+G+ + + AL LF
Sbjct: 339 --------------------------FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 273 MGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT----ALIDMYC 328
+ S GL + ++ V AC L EG ++G I+ SSL LD A IDMY
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK----SSLSLDVCVANAAIDMYG 428
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
KC+ + A RVF+ M R+ VSWNA+I H +G + L LF M+
Sbjct: 429 KCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR------------ 476
Query: 389 SPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANL 448
R++PDE TF G G + G+ N + + ++
Sbjct: 477 --------SRIEPDEFTF-GSILKACTGGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDM 526
Query: 449 LANAGLVDEAEK 460
+ G+++EAEK
Sbjct: 527 YSKCGMIEEAEK 538
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 215 DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMG 274
D+ + ++++D Y + + +F +P+KN V+W+ +I+G ++ ALK F+EM
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 275 SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVE 334
V + + V+ +C + L+ G +H ++ + I+ TA +DMY KC ++
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 333
Query: 335 LATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM----VGMDKV 380
A +F+ N N S+NAMI G+ L LF + +G D++
Sbjct: 334 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 383
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 230/502 (45%), Gaps = 61/502 (12%)
Query: 98 GVDFTLLIFRYFNNPLDTFCVNTVISAYCKS--HDPHLAQVFYFRSLRFRFFPNSYTFVP 155
G+D +F D NT+I+ Y +S ++ L V + + P+S+T
Sbjct: 191 GIDSVRRVFEVMPRK-DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK--PDSFTLSS 247
Query: 156 LIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARD 215
++ ++ G++ H VI+ G DS + + +SL+ MYA ++ + +F + RD
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 216 LASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGS 275
++WN +++G+++ AL+LFR+M +
Sbjct: 308 G-------------------------------ISWNSLVAGYVQNGRYNEALRLFRQMVT 336
Query: 276 VGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVEL 335
+K A V+ AC A L G+ +HG ++R S++ + +AL+DMY KC ++
Sbjct: 337 AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKA 396
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRG 395
A ++F+RM + VSW A+I+GH +HG + +SLF+EM K +G
Sbjct: 397 ARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM----KRQG------------- 439
Query: 396 VVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLV 455
++P++V F+ + YF MT V+GL H +A+LL AG +
Sbjct: 440 ---VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 456 DEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQF 515
+EA + M + +W+ LL+ C +++ L E+ A+ + + +N+ Y
Sbjct: 497 EEAYNFISKMC-----VEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVL 551
Query: 516 LLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMM 575
+ +YA +W+ ++ ++ M+++ L P S +++K H F ++ H ++ +N
Sbjct: 552 MCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEF 611
Query: 576 MDELARRFRMPSVDSGQSSVRH 597
+ + + + S V H
Sbjct: 612 LKAVMEQMEKEGYVADTSGVLH 633
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 188/384 (48%), Gaps = 25/384 (6%)
Query: 85 LARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFR---S 141
L R L+S +S+ + L+F +P TF N +I + +H P A + + S
Sbjct: 54 LVRQLISVSSSFGETQYASLVFNQLQSP-STFTWNLMIRSLSVNHKPREALLLFILMMIS 112
Query: 142 LRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDV 201
+ +F + +TF +I +C + I G + H IK GF + + QN+L+ +Y CG
Sbjct: 113 HQSQF--DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKP 170
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKAR 261
R +FD M R + SW +M+ G + L SA +F+ MP +N+V+W MI+ ++K R
Sbjct: 171 DSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNR 230
Query: 262 NPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT 321
P A +LFR M +K N T+V ++ A + L GR VH + L T
Sbjct: 231 RPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGT 290
Query: 322 ALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVK 381
ALIDMY KC ++ A +VF+ M ++L +WN+MI +HG E+ LSLF+EM V
Sbjct: 291 ALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASV- 349
Query: 382 GEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAH 441
+PD +TF+G+ G YF +M V+G+ P H
Sbjct: 350 ------------------EPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREH 391
Query: 442 LWCMANLLANAGLVDEAEKCLRNM 465
CM LL A V++A + +M
Sbjct: 392 NACMIQLLEQALEVEKASNLVESM 415
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 219/480 (45%), Gaps = 57/480 (11%)
Query: 104 LIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF-PNSYTFVPLIGSCGN 162
L+F +F++ T N +I + S P + +FY R L P+ +TF + SC
Sbjct: 60 LLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCER 119
Query: 163 TGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSM 222
I + H VI++GF V SL+ Y+ G V++A
Sbjct: 120 IKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIAS----------------- 162
Query: 223 VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
+FD MP ++LV+WN+MI F AL +++ MG+ G+ G++
Sbjct: 163 --------------KVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDS 208
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T+V ++++C + L G +H + S + + ALIDMY KC +E A VF
Sbjct: 209 YTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNG 268
Query: 343 MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPD 402
M R++++WN+MI+G+ +HG + +S F +MV GV +P+
Sbjct: 269 MRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA-----------------SGV---RPN 308
Query: 403 EVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCL 462
+TF+G+ G +F+ M+ F L PN H CM +L AG ++ + + +
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMI 368
Query: 463 RNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAV 522
+ + +LW LL C+ R++ LGE K LV + N Y + IY+
Sbjct: 369 -----YASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
Query: 523 AAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARR 582
A + ++++KL++ L +PG S +++ VH F V +K H + + E+ R
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINR 483
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 216/464 (46%), Gaps = 58/464 (12%)
Query: 118 VNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
+N +I+ Y +++ A V + L P+ TF ++ +C + G + H Q+
Sbjct: 598 MNALIAGYSQNNLEE-AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 656
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
K GF S + + + S++ Y+ + ++ A A
Sbjct: 657 KRGFSS----EGEYLGI--------------------------SLLGMYMNSRGMTEACA 686
Query: 238 LF-DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA 296
LF ++ K++V W M+SG + ALK ++EM G+ + T V V+ C +
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR-NLVSWNAMI 355
L+EGR++H I + + LIDMY KC ++ +++VF+ M R N+VSWN++I
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Query: 356 LGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXX 415
G+ +G ED L +FD M + PDE+TF+G+
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQ--------------------SHIMPDEITFLGVLTACSH 846
Query: 416 XXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRE 475
GR F+ M +G++ H+ CM +LL G + EA+ + ++ +
Sbjct: 847 AGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQ-----NLKPD 901
Query: 476 SMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKL 535
+ LW++LL CR D GE A+ L+++ P+N + Y L IYA WE + ++K+
Sbjct: 902 ARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKV 961
Query: 536 MKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDEL 579
M++R + +PG S +D++ H F +K H I + M +++L
Sbjct: 962 MRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 35/296 (11%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N+++S Y P + + FPN +TF ++ +C + GR+ H
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAG--- 230
+IK G + +L+ MYA C + AR +F+ ++ + W + GY++AG
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 231 --------------------------------DLSSAHALFDVMPDKNLVTWNIMISGFL 258
L A LF M ++V WN+MISG
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHG 303
Query: 259 KARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLI 318
K A++ F M +K +T+ V++A G A L G VH I++ S++
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY 363
Query: 319 LDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ ++L+ MY KC ++E A +VFE + +N V WNAMI G+ +G + LF +M
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 141/347 (40%), Gaps = 53/347 (15%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
++ +L+S S ++ +F D F N +I Y + + H +
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW-NAMIRGYAHNGESHKVMELFMDMKS 421
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV 203
+ + +TF L+ +C + + G + H+ +IK
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK------------------------ 457
Query: 204 ARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP 263
LA++L N++VD Y + G L A +F+ M D++ VTWN +I +++ N
Sbjct: 458 -------KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 264 GYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTAL 323
A LF+ M G+ + + + AC L +G+ VH ++ L ++L
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570
Query: 324 IDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGE 383
IDMY KC ++ A +VF + ++VS NA+I G+ + E+ + LF EM+
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEML-------- 621
Query: 384 VEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMT 430
RGV P E+TF I G + Q+T
Sbjct: 622 ---------TRGV---NPSEITFATIVEACHKPESLTLGTQFHGQIT 656
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 32/271 (11%)
Query: 104 LIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNT 163
L+F ++P D N +IS + K +A ++F + T ++ + G
Sbjct: 282 LLFGEMSSP-DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV 223
+ G HA+ IK G S + V +SL+ MY+ C ++ A +F+++ ++ WN+M+
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 224 DGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
GY G+ +H + ++LF +M S G +
Sbjct: 401 RGYAHNGE---SHKV----------------------------MELFMDMKSSGYNIDDF 429
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
T +++ C S L+ G H II+ +L + AL+DMY KC +E A ++FERM
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 344 TNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+R+ V+WN +I + + + LF M
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
N++VD Y + +S A FD + +K++ WN M+S + PG L+ F + +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
N T V++ C R ++ GR +H S+I+M + AL+DMY KC R+ A RV
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
FE + + N V W + G+ G PE+ + +F+ M
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 34/263 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D NT+I +Y + + A + R + + +C + + G++ H
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH 552
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+K G D L +SLI MY+ CG ++ AR +F S+
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL---------------------- 590
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
P+ ++V+ N +I+G+ N A+ LF+EM + G+ + T +V AC
Sbjct: 591 ---------PEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 294 RSARLKEGRSVHGSII-RMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN-RNLVSW 351
+ L G HG I R FS L +L+ MY R + A +F +++ +++V W
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 352 NAMILGHCIHGSPEDGLSLFDEM 374
M+ GH +G E+ L + EM
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEM 723
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 6/224 (2%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
+L +LL N G+ +F ++P ++S + ++ A FY
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV 203
P+ TFV ++ C + GR H+ + D N+LI MYA CGD++
Sbjct: 726 DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 204 ARVLFDSMLAR-DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
+ +FD M R ++ SWNS+++GY + G A +FD M +++ I G L A +
Sbjct: 786 SSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Query: 263 PGYAL----KLFREM-GSVGLKGNATTMVCVVTACGRSARLKEG 301
+ K+F M G G++ + C+V GR L+E
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 202/438 (46%), Gaps = 61/438 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN +T+ ++ + ++S + HAQV+K ++ V +L+
Sbjct: 395 PNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALL--------------- 435
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
D Y++ G + A +F + DK++V W+ M++G+ + A+
Sbjct: 436 ----------------DAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRS-ARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
K+F E+ G+K N T ++ C + A + +G+ HG I+ SSL + +AL+ M
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y K +E A VF+R ++LVSWN+MI G+ HG L +F EM
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR--------- 590
Query: 387 DESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
+++ D VTFIG+ G YF M + P H CM
Sbjct: 591 -----------KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 447 NLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMY 506
+L + AG +++A K + NM G S +W +LA CR + LG A+ ++ M
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAG-----STIWRTILAACRVHKKTELGRLAAEKIIAMK 694
Query: 507 PKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
P++ A Y L +YA + W+ + V+KLM ER + PG S +++K ++F ++ H
Sbjct: 695 PEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSH 754
Query: 567 EGIEAVNMMMDELARRFR 584
+ + M +++L+ R +
Sbjct: 755 PLKDQIYMKLEDLSTRLK 772
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 142/343 (41%), Gaps = 84/343 (24%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
T+IS Y ++ + R PNS+TF +G G G + H V+K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAG-DLSSAHA 237
NG D +PV NSLI++Y CG+V+ AR+LFD + + +WNSM+ GY G DL +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 238 LFDV----------------------------------------MPDKNLVTWNIMISGF 257
+ + + D+N+ T ++ +
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAY 340
Query: 258 LKARNPGYALKLFREMGSV--------------------------------GLKGNATTM 285
K AL+LF+E+G V G++ N T
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++TA + VH +++ S + TAL+D Y K +VE A +VF + +
Sbjct: 401 SVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 456
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
+++V+W+AM+ G+ G E + +F E+ KG ++ +E
Sbjct: 457 KDIVAWSAMLAGYAQTGETEAAIKMFGEL-----TKGGIKPNE 494
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%)
Query: 215 DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMG 274
D++ S+VD Y++ + +FD M ++N+VTW +ISG+ + L LF M
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 275 SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVE 334
+ G + N+ T + G VH +++ ++ + +LI++Y KC V
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 246
Query: 335 LATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
A +F++ +++V+WN+MI G+ +G + L +F M
Sbjct: 247 KARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 34/267 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNT-GCIVSGRKC 172
D + +++ Y ++ + A + + PN +TF ++ C T + G++
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF 517
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H IK+ DS L V ++L+ MYA G+++ A +F +DL SWNSM+ GY + G
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQA 577
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
AL +F+EM +K + T + V AC
Sbjct: 578 MK-------------------------------ALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Query: 293 GRSARLKEGRSVHGSIIRMFSRS-SLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
+ ++EG ++R + + ++ ++D+Y + ++E A +V E M N +
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666
Query: 352 NAMILGHC-IHGSPEDGLSLFDEMVGM 377
IL C +H E G ++++ M
Sbjct: 667 WRTILAACRVHKKTELGRLAAEKIIAM 693
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%)
Query: 225 GYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
G + + L +AH LFD P ++ ++ ++ GF + A +LF + +G++ + +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
V+ GR +H I+ + + T+L+D Y K + +VF+ M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 345 NRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
RN+V+W +I G+ + ++ L+LF M
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRM 185
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 211/454 (46%), Gaps = 61/454 (13%)
Query: 139 FRSLRFRFFP-NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYAD 197
FR ++ + + Y F ++ +CG G I G++ HA +I+ F + V ++LI MY
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 198 CGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGF 257
C + A+ +F D M KN+V+W M+ G+
Sbjct: 318 CKCLHYAKTVF-------------------------------DRMKQKNVVSWTAMVVGY 346
Query: 258 LKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSL 317
+ A+K+F +M G+ + T+ ++AC + L+EG HG I +
Sbjct: 347 GQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYV 406
Query: 318 ILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGM 377
+ +L+ +Y KC ++ +TR+F M R+ VSW AM+ + G + + LFD+MV
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH 466
Query: 378 DKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKP 437
L+PD VT G+ G+ YFK MT +G+ P
Sbjct: 467 G--------------------LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVP 506
Query: 438 NFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQ 497
+ H CM +L + +G ++EA + + M +++ W LL+ CR + ++ +G+
Sbjct: 507 SIGHYSCMIDLFSRSGRLEEAMRFINGMP-----FPPDAIGWTTLLSACRNKGNLEIGKW 561
Query: 498 FAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVH 557
A+ L+++ P + A Y L IYA +W++V+ +++ M+E+ + PG S + K +H
Sbjct: 562 AAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLH 621
Query: 558 NFKVSEKRHEGIEAVNMMMDELARRFRMPSVDSG 591
+F ++ ++ + ++EL + +D+G
Sbjct: 622 SFSADDESSPYLDQIYAKLEELNNKI----IDNG 651
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 127/223 (56%), Gaps = 1/223 (0%)
Query: 152 TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM 211
T + ++ + G + G++ H QVIK GF+S L V + L++MYA+ G + A+ +F +
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
R+ +NS++ G L G + A LF M +K+ V+W MI G + A++ FR
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
EM GLK + V+ ACG + EG+ +H IIR + + + +ALIDMYCKC+
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ A VF+RM +N+VSW AM++G+ G E+ + +F +M
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 6/193 (3%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
N+++H YA AR +FD + +L SWN+++ Y +AG +S + F+ +PD++ V
Sbjct: 45 NNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGV 104
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT--TMVCVVTACGRSARLKEGRSVHG 306
TWN++I G+ + G A+K + M N T T++ ++ + + G+ +HG
Sbjct: 105 TWNVLIEGYSLSGLVGAAVKAYNTMMR-DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHG 163
Query: 307 SIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPED 366
+I++ S L++ + L+ MY + A +VF + +RN V +N+++ G G ED
Sbjct: 164 QVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIED 223
Query: 367 GLSLFDEMVGMDK 379
L LF GM+K
Sbjct: 224 ALQLFR---GMEK 233
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 236/517 (45%), Gaps = 83/517 (16%)
Query: 83 PFLARTLLSRA--SNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFR 140
FL LL R S + F + IFRY PL T N +I + S P LA +Y R
Sbjct: 35 SFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL-TNDWNAIIRGFAGSSHPSLAFSWY-R 92
Query: 141 SL-----------RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQN 189
S+ R S+T + +C C + + H Q+ + G +
Sbjct: 93 SMLQQSSSSSAICRVDALTCSFT----LKACARALCSSAMDQLHCQINRRGLSA------ 142
Query: 190 SLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVT 249
DS+L +++D Y + GDL SA+ LFD MP +++ +
Sbjct: 143 -------------------DSLLC------TTLLDAYSKNGDLISAYKLFDEMPVRDVAS 177
Query: 250 WNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSV-HGSI 308
WN +I+G + A++L++ M + G++ + T+V + AC +KEG ++ HG
Sbjct: 178 WNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHG-- 235
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT-NRNLVSWNAMILGHCIHGSPEDG 367
+S ++I+ A IDMY KC V+ A +VFE+ T +++V+WN MI G +HG
Sbjct: 236 ---YSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRA 292
Query: 368 LSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFK 427
L +FD++ D G+ +PD+V+++ G S F
Sbjct: 293 LEIFDKL-----------------EDNGI---KPDDVSYLAALTACRHAGLVEYGLSVFN 332
Query: 428 QMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCR 487
M G++ N H C+ +LL+ AG + EA + +M+ M + +LW +LL
Sbjct: 333 NMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMS-----MIPDPVLWQSLLGASE 386
Query: 488 FRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGS 547
DV + E ++ + +M N + L +YA +W++V V+ M+ +++ IPG
Sbjct: 387 IYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGL 446
Query: 548 SLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
S ++ K +H F S+K HE + +DE+ + R
Sbjct: 447 SYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIR 483
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 224/488 (45%), Gaps = 78/488 (15%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D F N +I Y K L++ + R + +S ++ +I G IVS R+
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPK----RDSVSYNSMIDGYVKCGLIVSAREL- 209
Query: 174 AQVIKNGFDSVLPVQ-------NSLIHMYADCGD-VQVARVLFDSMLARDLASWNSMVDG 225
FD ++P++ NS+I YA D V +A LF M +DL SWNSM+DG
Sbjct: 210 -------FD-LMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDG 261
Query: 226 YLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLK--------------------ARN--- 262
Y++ G + A LFDVMP +++VTW MI G+ K A N
Sbjct: 262 YVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMM 321
Query: 263 PGY--------ALKLFREMGSVG-LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS 313
GY AL++F +M L + TT+V V+ A + RL + +H I+
Sbjct: 322 AGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQF 381
Query: 314 RSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDE 373
L ALIDMY KC ++ A VFE + N+++ WNAMI G IHG E S FD
Sbjct: 382 YLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGE---SAFDM 438
Query: 374 MVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVF 433
++ ++++ L+PD++TF+G+ G F+ M
Sbjct: 439 LLQIERLS-----------------LKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKH 481
Query: 434 GLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVY 493
++P H CM ++L+ +G ++ A+ + M D+ +W L C ++
Sbjct: 482 KIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDV-----IWRTFLTACSHHKEFE 536
Query: 494 LGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLK 553
GE AK L+ N + Y L +YA W++V V+ +MKER++ IPG S ++L
Sbjct: 537 TGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 596
Query: 554 YIVHNFKV 561
VH F V
Sbjct: 597 GRVHEFFV 604
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 11/269 (4%)
Query: 109 FNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVS 168
F D F N VI ++ DP A + L + ++ ++ +C G +
Sbjct: 80 FGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKG 139
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLE 228
G + H + K G S L +QN LI +Y CG + ++R +FD M RD S+NSM+DGY++
Sbjct: 140 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK 199
Query: 229 AGDLSSAHALFDVMP--DKNLVTWNIMISGFLKARNP-GYALKLFREMGSVGLKGNATTM 285
G + SA LFD+MP KNL++WN MISG+ + + A KLF +M L +
Sbjct: 200 CGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDL----ISW 255
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ + R+++ + + + R ++ +ID Y K V A +F++M +
Sbjct: 256 NSMIDGYVKHGRIEDAK----GLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPH 311
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
R++V++N+M+ G+ + + L +F +M
Sbjct: 312 RDVVAYNSMMAGYVQNKYHMEALEIFSDM 340
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 203/409 (49%), Gaps = 33/409 (8%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN TFV I +C + + GR+ H V+K F V +LI MY+ C + A ++
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 208 FDSML-ARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNL----VTWNIMISGFLKARN 262
F + R+L SWNS++ G + G +A LF+ + + L TWN +ISGF +
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
A K F M SV + + + +++AC LK G+ +HG +I+ + + + T+
Sbjct: 349 VIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS 408
Query: 323 LIDMYCKCRRVELATRVFERM--TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
LIDMY KC A R+F+R ++ V WN MI G+ HG E + +F E++ +KV
Sbjct: 409 LIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIF-ELLREEKV 467
Query: 381 KGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFA 440
+P TF + G F+ M + +G KP+
Sbjct: 468 -------------------EPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE 508
Query: 441 HLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAK 500
H+ CM +LL +G + EA++ + M+ S ++++LL CR D LGE+ A
Sbjct: 509 HIGCMIDLLGRSGRLREAKEVIDQMS------EPSSSVYSSLLGSCRQHLDPVLGEEAAM 562
Query: 501 LLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSL 549
L ++ P+N A + L IYA +WE+V ++++++ +++L +PG SL
Sbjct: 563 KLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 34/227 (14%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
NS T ++G CG+ I G + H +K+GF+ + V SL+ MY+ CG+ +A +F
Sbjct: 131 NSVTVASVLGGCGD---IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMF 187
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
+ + + + ++N+ + G +E G ++ ++F++M + P
Sbjct: 188 EKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRK-------------FSSEEP----- 229
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
N T V +TAC L+ GR +HG +++ + ++ TALIDMY
Sbjct: 230 ------------NDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYS 277
Query: 329 KCRRVELATRVFERMTN-RNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
KCR + A VF + + RNL+SWN++I G I+G E + LF+++
Sbjct: 278 KCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 34/210 (16%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN +TF PL+ SC G +V GR HAQV+K GF
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGF-------------------------- 62
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
D+ + ++V Y++ ++ A + D MP++ + + N +SG L+ G+
Sbjct: 63 -----FVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLEN---GFCR 114
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
FR G + G+ V V + G ++ G +H ++ + + T+L+ MY
Sbjct: 115 DAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMY 174
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILG 357
+C LA R+FE++ ++++V++NA I G
Sbjct: 175 SRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D+ N++IS + + A F+ R L P+ L+ +C + + +G++ H
Sbjct: 332 DSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIH 391
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM--LARDLASWNSMVDGYLEAGD 231
VIK + + V SLI MY CG AR +FD +D WN M+ GY + G+
Sbjct: 392 GHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGE 451
Query: 232 LSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMG-SVGLKGNATTMV 286
SA +F+++ ++ +L T+ ++S N ++FR M G K + +
Sbjct: 452 CESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIG 511
Query: 287 CVVTACGRSARLKEGRSV 304
C++ GRS RL+E + V
Sbjct: 512 CMIDLLGRSGRLREAKEV 529
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 198/394 (50%), Gaps = 29/394 (7%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
N++I Y + G++ AR LFD M RD+ SWN++++GY GD+ + +FD MP++N+
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVG-LKGNATTMVCVVTACGRSARLKEGRSVH-- 305
+WN +I G+ + L F+ M G + N TM V++AC + G+ VH
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 306 GSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPE 365
G + +++ + + ALIDMY KC +E+A VF+ + R+L+SWN MI G HG
Sbjct: 214 GETLG-YNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 366 DGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSY 425
+ L+LF EM K G + PD+VTF+G+ G +Y
Sbjct: 273 EALNLFHEM----KNSG----------------ISPDKVTFVGVLCACKHMGLVEDGLAY 312
Query: 426 FKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLAL 485
F M F + P H C+ +LL+ AG + +A + + M + ++++WA LL
Sbjct: 313 FNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMP-----VKADAVIWATLLGA 367
Query: 486 CRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIP 545
+ + V +GE + L+ + P+N A + L IY A ++++ + ++ M++
Sbjct: 368 SKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEA 427
Query: 546 GSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDEL 579
G S ++ + F S ++H E + ++ EL
Sbjct: 428 GVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 34/234 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSV-LPVQNSLIHMYADCGDVQVARV 206
PN T ++ +C G G+ H G++ V + V+N+LI MY CG +++A
Sbjct: 186 PNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAME 245
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
+F + RDL SWN+M++G +AH + A
Sbjct: 246 VFKGIKRRDLISWNTMINGL-------AAHG------------------------HGTEA 274
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA-LID 325
L LF EM + G+ + T V V+ AC +++G + S+ FS I ++D
Sbjct: 275 LNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVD 334
Query: 326 MYCKCRRVELATRVFERM-TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
+ + + A +M + V W ++ ++ + G +E++ ++
Sbjct: 335 LLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLE 388
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 211/480 (43%), Gaps = 60/480 (12%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+FR F P D N +I Y + + L+ + + S T V L+ G+
Sbjct: 278 LFREFRKP-DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
I + H +K+ F S V +L +Y+ +++ AR
Sbjct: 337 LIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR------------------- 374
Query: 225 GYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
LFD P+K+L +WN MISG+ + A+ LFREM N T
Sbjct: 375 ------------KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
+ C+++AC + L G+ VH + SS+ + TALI MY KC + A R+F+ MT
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 345 NRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEV 404
+N V+WN MI G+ +HG ++ L++F EM+ + G+ P V
Sbjct: 483 KKNEVTWNTMISGYGLHGQGQEALNIFYEML-----------------NSGIT---PTPV 522
Query: 405 TFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRN 464
TF+ + G F M +G +P+ H CM ++L AG + A + +
Sbjct: 523 TFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEA 582
Query: 465 MAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAA 524
M+ G S +W LL CR +D L ++ L ++ P N+ + L I++
Sbjct: 583 MSIEPG-----SSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADR 637
Query: 525 QWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
+ +TV++ K+R+L PG +L+++ H F ++ H ++ + +++L + R
Sbjct: 638 NYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR 697
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 34/293 (11%)
Query: 85 LARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLA-QVFYFRSLR 143
L L R S+L + + IF P D F N ++ + + PH + VF
Sbjct: 54 LLTKLTQRLSDLGAIYYARDIFLSVQRP-DVFLFNVLMRGFSVNESPHSSLSVFAHLRKS 112
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV 203
PNS T+ I + +GR H Q + +G DS L + ++++ MY V+
Sbjct: 113 TDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVED 172
Query: 204 ARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP 263
AR +FD MP+K+ + WN MISG+ K
Sbjct: 173 ARKVFDR-------------------------------MPEKDTILWNTMISGYRKNEMY 201
Query: 264 GYALKLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
++++FR++ + + TT++ ++ A L+ G +H + S + T
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
I +Y KC ++++ + +F ++V++NAMI G+ +G E LSLF E++
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 32/189 (16%)
Query: 171 KCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAG 230
+ HAQ+I +GF + + + L +D G + AR +F S+ D+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV-------------- 83
Query: 231 DLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREM-GSVGLKGNATTMVCVV 289
+N+++ GF +P +L +F + S LK N++T +
Sbjct: 84 -----------------FLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAI 126
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLV 349
+A + GR +HG + S L+L + ++ MY K RVE A +VF+RM ++ +
Sbjct: 127 SAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTI 186
Query: 350 SWNAMILGH 358
WN MI G+
Sbjct: 187 LWNTMISGY 195
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 221/482 (45%), Gaps = 55/482 (11%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+F + D N++I AY + + A Y + F + +T ++ + +
Sbjct: 195 VFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
++ GR+ H ++IK GF V + LI Y+ CG D
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC----------------------D 292
Query: 225 GYLEAGDLSSAHALFDVMPDKNLVTWNIMISGF-LKARNPGYALKLFREMGSVGLKGNAT 283
G + + +F + +LV WN MISG+ + A+K FR+M +G + +
Sbjct: 293 G------MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDC 346
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLI-LDTALIDMYCKCRRVELATRVFER 342
+ VCV +AC + + + +HG I+ S+ I ++ ALI +Y K ++ A VF+R
Sbjct: 347 SFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR 406
Query: 343 MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPD 402
M N VS+N MI G+ HG + L L+ M+ D G+ P+
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRML-----------------DSGIA---PN 446
Query: 403 EVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCL 462
++TF+ + G+ YF M + F ++P H CM +LL AG ++EAE+ +
Sbjct: 447 KITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFI 506
Query: 463 RNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAV 522
M G S+ WA LL CR +++ L E+ A L+ M P Y L +YA
Sbjct: 507 DAMPYKPG-----SVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYAD 561
Query: 523 AAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARR 582
A +WE +++V+K M+ +R+ PG S +++K H F + H I VN ++E+ ++
Sbjct: 562 ARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKK 621
Query: 583 FR 584
+
Sbjct: 622 MK 623
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
Query: 166 IVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDG 225
+ +G+ HA +K+ S + N +++Y+ CG + AR F S ++ S+N +V
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 226 YLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
Y + + A LFD +P + V++N +ISG+ AR A+ LF+ M +G + + T+
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ AC R+ + +H + S ++ A + Y K + A VF M
Sbjct: 144 SGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 346 -RNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
R+ VSWN+MI+ + H L+L+ EM+
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMI 232
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 36/265 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT NT+IS Y + + A V + R + F + +T LI +C + ++ ++ H
Sbjct: 104 DTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLH 161
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+ GFDS V N+ + Y+ G ++ A +F M
Sbjct: 162 CFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM---------------------- 199
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
D + D+ V+WN MI + + + AL L++EM G K + T+ V+ A
Sbjct: 200 ------DELRDE--VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVEL---ATRVFERMTNRNLVS 350
L GR HG +I+ + + + LID Y KC + + +VF+ + + +LV
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 351 WNAMILGHCIHGS-PEDGLSLFDEM 374
WN MI G+ ++ E+ + F +M
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQM 336
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 206/444 (46%), Gaps = 66/444 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIVS--GRKCHAQVIKNGFDSV---LPVQNSLIHMYADCG--- 199
PN T + L +CG G G + HAQVI NG+++V + SL+HMYA G
Sbjct: 297 PNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIA 356
Query: 200 --------------------------DVQVARVLFDSMLA-RDLASWNSMVDGYLEAGDL 232
D++ A LF+ + + D SW SM+DGYLEAGD+
Sbjct: 357 SAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDV 416
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
S A LF + DK+ VTW +MISG ++ A L +M GLK +T ++++
Sbjct: 417 SRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSA 476
Query: 293 GRSARLKEGRSVHGSIIRMFS--RSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
G ++ L +G+ +H I + + LIL +L+ MY KC +E A +F +M ++ VS
Sbjct: 477 GATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVS 536
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIX 410
WN+MI+G HG + L+LF EM+ K +P+ VTF+G+
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGK--------------------KPNSVTFLGVL 576
Query: 411 XXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDG 470
G FK M + + ++P H M +LL AG + EAE+ + +
Sbjct: 577 SACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP---- 632
Query: 471 DMSRESMLWANLLALC----RFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQW 526
+ + ++ LL LC R + + E+ A L+++ P N + L +YA +
Sbjct: 633 -FTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRH 691
Query: 527 ENVSTVQKLMKERRLGIIPGSSLV 550
+ ++K M + + PG S V
Sbjct: 692 DMEKEMRKEMGIKGVKKTPGCSWV 715
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 110/211 (52%), Gaps = 9/211 (4%)
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV 223
G +V R ++ + G + + SL+ YA G + ARVLF+ M R++ + N+M+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 224 DGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
GY++ ++ A LF MP KN+V+W +M++ A++LF EM + N
Sbjct: 116 TGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMP----ERNVV 170
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
+ +VT R+ +++ + V + M SR ++ A+I Y + +E A +F M
Sbjct: 171 SWNTLVTGLIRNGDMEKAKQVFDA---MPSR-DVVSWNAMIKGYIENDGMEEAKLLFGDM 226
Query: 344 TNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ +N+V+W +M+ G+C +G + LF EM
Sbjct: 227 SEKNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 121/265 (45%), Gaps = 44/265 (16%)
Query: 163 TGCIVSGRKCHAQVIKNGFDSVLPVQ-NSLIHMYADCGDVQVARVLFDSMLARDLASWNS 221
TG I +G A+ + + S V N++I Y + ++ A++LF M +++ +W S
Sbjct: 177 TGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTS 236
Query: 222 MVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY--ALKLFREMGS--VG 277
MV GY GD+ A+ LF MP++N+V+W MISGF A N Y AL LF EM
Sbjct: 237 MVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGF--AWNELYREALMLFLEMKKDVDA 294
Query: 278 LKGNATTMVCVVTACGRSA----RLKE-----------------GRSVHGSIIRMFSRSS 316
+ N T++ + ACG RL E GR + S++ M++ S
Sbjct: 295 VSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGR-LAKSLVHMYASSG 353
Query: 317 LILDTA--------------LIDMYCKCRRVELATRVFERMTN-RNLVSWNAMILGHCIH 361
LI +I+ Y K +E A +FER+ + + VSW +MI G+
Sbjct: 354 LIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEA 413
Query: 362 GSPEDGLSLFDEMVGMDKVKGEVEI 386
G LF ++ D V V I
Sbjct: 414 GDVSRAFGLFQKLHDKDGVTWTVMI 438
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 50/199 (25%)
Query: 199 GDVQVARVLFDSMLARD----LASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMI 254
G + AR L D + R + W S++ Y + G L A LF+VMP++N+VT N M+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 255 SGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSR 314
+G++K R A LFREM N + ++TA
Sbjct: 116 TGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTA----------------------- 147
Query: 315 SSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
C R E A +F+ M RN+VSWN ++ G +G E +FD M
Sbjct: 148 ------------LCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 375 VGMDKV------KGEVEID 387
D V KG +E D
Sbjct: 196 PSRDVVSWNAMIKGYIEND 214
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 189/418 (45%), Gaps = 56/418 (13%)
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLE 228
G++ H +KN +N+LI Y CG++ +F M R
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAER-------------- 581
Query: 229 AGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCV 288
++ VTWN MISG++ AL L M G + ++ V
Sbjct: 582 ----------------RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 289 VTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL 348
++A A L+ G VH +R S +++ +AL+DMY KC R++ A R F M RN
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 349 VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIG 408
SWN+MI G+ HG E+ L LF+ M K+ G ++P PD VTF+G
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETM----KLDG-----QTP----------PDHVTFVG 726
Query: 409 IXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKF 468
+ G +F+ M+D +GL P H CMA++L AG +D+ E + M
Sbjct: 727 VLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP-- 784
Query: 469 DGDMSRESMLWANLL-ALCRFR-RDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQW 526
M ++W +L A CR R LG++ A++L + P+N Y L +YA +W
Sbjct: 785 ---MKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRW 841
Query: 527 ENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
E++ +K MK+ + G S V +K VH F +K H + + + EL R+ R
Sbjct: 842 EDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 128/317 (40%), Gaps = 80/317 (25%)
Query: 121 VISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGC--IVSGRKCHAQVIK 178
++S Y ++ + A VF ++ F N Y FV ++ +C G I+ GR+ H + K
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 179 NGFDSVLPVQNSLIHMYADC-GDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
+ V N LI MY C G V A F + ++ SWNS++ Y +AGD SA
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 238 LFDVM------------------------PD-----------------KNLVTWNIMISG 256
+F M PD +L + ++S
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 257 FLKARNPGYALKLFREM---GSVGLKG-------------------NATTMVCVVT---- 290
F K+ + YA K+F +M +V L G + +M+ V
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 291 ---------ACGRSARLKEGRSVHGSIIRMFSRSSLI-LDTALIDMYCKCRRVELATRVF 340
+ LK+GR VHG +I ++ + L++MY KC + A RVF
Sbjct: 313 ILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 341 ERMTNRNLVSWNAMILG 357
MT+++ VSWN+MI G
Sbjct: 373 YFMTDKDSVSWNSMITG 389
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
L+ + L +D+ N++++ YLE GD SA +FD MP +N V+W ++SG+ + A
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGR--SARLKEGRSVHGSIIRMFSRSSLILDTALI 324
L R+M G+ N V V+ AC S + GR +HG + ++ ++ LI
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLI 146
Query: 325 DMYCKC-RRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
MY KC V A F + +N VSWN++I + G +F M
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 34/256 (13%)
Query: 108 YFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR-FRFFPNSYTFVPLIGSCGNTGCI 166
YF D+ N++I+ + + V ++S+R P S+T + + SC +
Sbjct: 373 YFMTDKDSVSWNSMITGL-DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 167 VSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGY 226
G++ H + +K G D + V N+L+ +YA+ G + R +F SM D SWNS++ G
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-GA 490
Query: 227 LEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMV 286
L + S +P+ + FL A+ G L N T
Sbjct: 491 LARSERS--------LPEA--------VVCFLNAQRAGQKL-------------NRITFS 521
Query: 287 CVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN- 345
V++A + + G+ +HG ++ + ALI Y KC ++ ++F RM
Sbjct: 522 SVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAER 581
Query: 346 RNLVSWNAMILGHCIH 361
R+ V+WN+MI G+ IH
Sbjct: 582 RDNVTWNSMISGY-IH 596
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 32/188 (17%)
Query: 169 GRKCHAQVIKNGF-DSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYL 227
GR+ H VI G D ++ + N L++MYA CG + AR +F M +D SWNSM+ G
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 228 EAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVC 287
+ G A + M +++ PG + T++
Sbjct: 392 QNGCFIEAVERYKSMRRHDIL--------------PG-----------------SFTLIS 420
Query: 288 VVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRN 347
+++C K G+ +HG +++ ++ + AL+ +Y + + ++F M +
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 480
Query: 348 LVSWNAMI 355
VSWN++I
Sbjct: 481 QVSWNSII 488
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 24/262 (9%)
Query: 97 CG-VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQ----VFYFRSLRFRFFPNSY 151
CG +D IF D N++IS Y H+ LA+ V++ R +S+
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMISGYI--HNELLAKALDLVWFMLQTGQRL--DSF 620
Query: 152 TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM 211
+ ++ + + + G + HA ++ +S + V ++L+ MY+ CG + A F++M
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM 680
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVM-------PDKNLVTWNIMISGFLKARNPG 264
R+ SWNSM+ GY G A LF+ M PD VT+ ++S A
Sbjct: 681 PVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDH--VTFVGVLSACSHAGLLE 738
Query: 265 YALKLFREMG-SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTAL 323
K F M S GL C+ GR+ L + + I +M + ++++ +
Sbjct: 739 EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK---LEDFIEKMPMKPNVLIWRTV 795
Query: 324 IDMYCKC--RRVELATRVFERM 343
+ C+ R+ EL + E +
Sbjct: 796 LGACCRANGRKAELGKKAAEML 817
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 208/466 (44%), Gaps = 58/466 (12%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHA 174
+ C N +IS Y + A + R +S T + L+ C + GR H
Sbjct: 121 SVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHG 180
Query: 175 QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSS 234
Q +K G DS + V NS I MY C G +EAG
Sbjct: 181 QCVKGGLDSEVAVLNSFITMYMKC--------------------------GSVEAG---- 210
Query: 235 AHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGR 294
LFD MP K L+TWN +ISG+ + L+L+ +M S G+ + T+V V+++C
Sbjct: 211 -RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269
Query: 295 SARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAM 354
K G V + ++ + A I MY +C + A VF+ M ++LVSW AM
Sbjct: 270 LGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 355 ILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXX 414
I + +HG E GL LFD+M+ RG+ +PD F+ +
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMI-----------------KRGI---RPDGAVFVMVLSACS 369
Query: 415 XXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSR 474
G F+ M + L+P H C+ +LL AG +DEA + + +M +
Sbjct: 370 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMP-----VEP 424
Query: 475 ESMLWANLLALCRFRRDVYLGE-QFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQ 533
+ +W LL C+ ++V + E FAK+ ++ P N+ Y + IY+ + E + ++
Sbjct: 425 DGAVWGALLGACKIHKNVDMAELAFAKV-IEFEPNNIGYYVLMSNIYSDSKNQEGIWRIR 483
Query: 534 KLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDEL 579
+M+ER PG S V+ K VH F ++ HE E V+ M+DEL
Sbjct: 484 VMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 29/238 (12%)
Query: 137 FYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYA 196
Y LR P++++F ++ SC + VSG++ H V K G ++ V +LI MY
Sbjct: 40 LYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYC 99
Query: 197 DCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISG 256
CG V AR +F+ ++ LS V +N +ISG
Sbjct: 100 KCGLVADARKVFEE---------------NPQSSQLS--------------VCYNALISG 130
Query: 257 FLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSS 316
+ A +FR M G+ ++ TM+ +V C L GRS+HG ++ S
Sbjct: 131 YTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE 190
Query: 317 LILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ + + I MY KC VE R+F+ M + L++WNA+I G+ +G D L L+++M
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 231/510 (45%), Gaps = 70/510 (13%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
FL+R LS ++++ +F NP + C NT+I A+ S P FRSLR
Sbjct: 49 FLSRLALSLIPR--DINYSCRVFSQRLNPTLSHC-NTMIRAFSLSQTP-CEGFRLFRSLR 104
Query: 144 ----FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCG 199
P S +F + C +G ++ G + H ++ +GF S + +L+ +Y+ C
Sbjct: 105 RNSSLPANPLSSSFA--LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCE 162
Query: 200 DVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLK 259
+ + A +FD +P ++ V+WN++ S +L+
Sbjct: 163 NS-------------------------------TDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 260 ARNPGYALKLFREMGS---VGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSS 316
+ L LF +M + +K + T + + AC L G+ VH I +
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 317 LILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVG 376
L L L+ MY +C ++ A +VF M RN+VSW A+I G ++G ++ + F+EM+
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 377 MDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQM-TDVFGL 435
+ P+E T G+ G +F +M + F +
Sbjct: 312 FG--------------------ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKI 351
Query: 436 KPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLG 495
KPN H C+ +LL A L+D+A +++M +M +S +W LL CR DV LG
Sbjct: 352 KPNLHHYGCVVDLLGRARLLDKAYSLIKSM-----EMKPDSTIWRTLLGACRVHGDVELG 406
Query: 496 EQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYI 555
E+ L+++ + Y LL Y+ +WE V+ ++ LMKE+R+ PG S ++L+
Sbjct: 407 ERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGT 466
Query: 556 VHNFKVSEKRHEGIEAVNMMMDELARRFRM 585
VH F V + H E + M+ E+ ++ ++
Sbjct: 467 VHEFIVDDVSHPRKEEIYKMLAEINQQLKI 496
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 205/440 (46%), Gaps = 62/440 (14%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D C V+SA+ K+ A ++ R + P+ TF ++ +CGN + G++
Sbjct: 228 DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEI 287
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H ++I NG S + V++SL+ MY CG V+
Sbjct: 288 HGKLITNGIGSNVVVESSLLDMYGKCGSVR------------------------------ 317
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
A +F+ M KN V+W+ ++ G+ + A+++FREM L T V+ AC
Sbjct: 318 -EARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGT----VLKAC 372
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
A ++ G+ +HG +R ++I+++ALID+Y K ++ A+RV+ +M+ RN+++WN
Sbjct: 373 AGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWN 432
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX 412
AM+ +G E+ +S F++MV +G+ +PD ++FI I
Sbjct: 433 AMLSALAQNGRGEEAVSFFNDMV-----------------KKGI---KPDYISFIAILTA 472
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
GR+YF M +G+KP H CM +LL AGL +EAE L +
Sbjct: 473 CGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLER-----AEC 527
Query: 473 SRESMLWANLLALCRFRRDVY-LGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVST 531
++ LW LL C D + E+ AK ++++ PK Y L +Y + +
Sbjct: 528 RNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALN 587
Query: 532 VQKLMKERRLGIIPGSSLVD 551
++KLM R + G S +D
Sbjct: 588 IRKLMVRRGVAKTVGQSWID 607
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 65/368 (17%)
Query: 153 FVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCG-DVQVARVLFDSM 211
+ L+ +C + G + HA V+K+G ++ V NSL+ +Y G ++ R +FD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
+D SW S M+SG++ + AL++F
Sbjct: 124 FVKDAISWTS-------------------------------MMSGYVTGKEHVKALEVFV 152
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
EM S GL N T+ V AC ++ GR HG +I + + + L +Y R
Sbjct: 153 EMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNR 212
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPC 391
A RVF+ M +++ W A++ + E+ L LF M + KG
Sbjct: 213 EPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLF---YAMHRGKG--------- 260
Query: 392 ADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRS-YFKQMTDVFGLKPNFAHLWCMANLLA 450
L PD TF + G+ + K +T+ G+ N + ++
Sbjct: 261 -------LVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN--GIGSNVVVESSLLDMYG 311
Query: 451 NAGLVDEAEKCLRNMAKFDGDMSRESMLWANLL-ALCRFRRDVYLGEQFAKLLVDMYPKN 509
G V EA + M+K + S+ W+ LL C+ E+ ++ +M K+
Sbjct: 312 KCGSVREARQVFNGMSK------KNSVSWSALLGGYCQNGEH----EKAIEIFREMEEKD 361
Query: 510 LACYQFLL 517
L C+ +L
Sbjct: 362 LYCFGTVL 369
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 202/442 (45%), Gaps = 58/442 (13%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHA 174
F N ++ +Y + P A Y +R P+ Y+ +I + G++ H+
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 175 QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSS 234
++ GF ++ I +Y G+ + AR +FD R L SWN+++ G AG +
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 235 AHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGR 294
A+++F +M GL+ + TMV V +CG
Sbjct: 202 -------------------------------AVEMFVDMKRSGLEPDDFTMVSVTASCGG 230
Query: 295 SARLKEGRSVHGSIIRMFS--RSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
L +H +++ + +S +++ +LIDMY KC R++LA+ +FE M RN+VSW+
Sbjct: 231 LGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWS 290
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX 412
+MI+G+ +G+ + L F +M + GV +P+++TF+G+
Sbjct: 291 SMIVGYAANGNTLEALECFRQM-----------------REFGV---RPNKITFVGVLSA 330
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
G++YF M F L+P +H C+ +LL+ G + EA+K + M M
Sbjct: 331 CVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP-----M 385
Query: 473 SRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTV 532
M+W L+ C DV + E A +V++ P N Y L +YA+ W++V V
Sbjct: 386 KPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERV 445
Query: 533 QKLMKERRLGIIPGSSLVDLKY 554
+KLMK +++ IP S +
Sbjct: 446 RKLMKTKKVAKIPAYSYASTTF 467
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 26/259 (10%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSY----TFVPLIGSCGNTGCIVSG 169
D FC + I+ YCK+ + F + R F N ++ +IG + G
Sbjct: 151 DEFCESGFITLYCKAGE--------FENARKVFDENPERKLGSWNAIIGGLNHAGRANEA 202
Query: 170 RKCHAQVIKNGFDSVLPVQNSLIHMYADCG---DVQVARVLFDSML------ARDLASWN 220
+ + ++G + P +++ + A CG D+ +A L +L D+ N
Sbjct: 203 VEMFVDMKRSGLE---PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 221 SMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
S++D Y + G + A +F+ M +N+V+W+ MI G+ N AL+ FR+M G++
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFS-RSSLILDTALIDMYCKCRRVELATRV 339
N T V V++AC ++EG++ + F L ++D+ + +++ A +V
Sbjct: 320 NKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV 379
Query: 340 FERMTNR-NLVSWNAMILG 357
E M + N++ W ++ G
Sbjct: 380 VEEMPMKPNVMVWGCLMGG 398
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 210/467 (44%), Gaps = 56/467 (11%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
+IS Y ++ A + +R PN +TF ++ SC + G++ H ++K
Sbjct: 122 TAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK 181
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
+DS + V +SL+ MYA +AG + A +
Sbjct: 182 WNYDSHIFVGSSLLDMYA-------------------------------KAGQIKEAREI 210
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
F+ +P++++V+ +I+G+ + AL++F + S G+ N T ++TA A L
Sbjct: 211 FECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALL 270
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
G+ H ++R +L +LIDMY KC + A R+F+ M R +SWNAM++G+
Sbjct: 271 DHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGY 330
Query: 359 CIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXX 418
HG + L LF M R R++PD VT + +
Sbjct: 331 SKHGLGREVLELFRLM-------------------RDEKRVKPDAVTLLAVLSGCSHGRM 371
Query: 419 XXXGRSYFKQM-TDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESM 477
G + F M +G KP H C+ ++L AG +DEA + ++ M +
Sbjct: 372 EDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS-----KPTAG 426
Query: 478 LWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMK 537
+ +LL CR V +GE + L+++ P+N Y L +YA A +W +V+ V+ +M
Sbjct: 427 VLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMM 486
Query: 538 ERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
++ + PG S + + +H F +++ H E V M E++ + +
Sbjct: 487 QKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMK 533
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 151 YTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDS 210
+ + L+ +C + + G++ HA +IK + ++ L+ Y C ++ AR + D
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 211 MLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLF 270
M P+KN+V+W MIS + + + AL +F
Sbjct: 113 M-------------------------------PEKNVVSWTAMISRYSQTGHSSEALTVF 141
Query: 271 REMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKC 330
EM K N T V+T+C R++ L G+ +HG I++ S + + ++L+DMY K
Sbjct: 142 AEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA 201
Query: 331 RRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+++ A +FE + R++VS A+I G+ G E+ L +F +
Sbjct: 202 GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D +I+ Y + A + R PN T+ L+ + + G++ H
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAH 277
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
V++ +QNSLI MY+ CG++ AR LFD+M R SWN+M+ GY + G
Sbjct: 278 CHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGR 337
Query: 234 SAHALFDVMPDK-----NLVTWNIMISGFLKARNPGYALKLFREM--GSVGLKGNATTMV 286
LF +M D+ + VT ++SG R L +F M G G K
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYG 397
Query: 287 CVVTACGRSARLKEG 301
C+V GR+ R+ E
Sbjct: 398 CIVDMLGRAGRIDEA 412
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 29/202 (14%)
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
EM +G + ++ AC L++G+ VH +I+ + L T L+ Y KC
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPC 391
+E A +V + M +N+VSW AMI + G + L++F EM+ D
Sbjct: 102 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG------------ 149
Query: 392 ADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNF-AHLWCMANLL- 449
+P+E TF + G KQ+ + +K N+ +H++ ++LL
Sbjct: 150 --------KPNEFTFATVLTSCIRASGLGLG----KQIHGLI-VKWNYDSHIFVGSSLLD 196
Query: 450 --ANAGLVDEAEKCLRNMAKFD 469
A AG + EA + + + D
Sbjct: 197 MYAKAGQIKEAREIFECLPERD 218
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 213/492 (43%), Gaps = 64/492 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N+++S Y A R P++ + L+ + G + G+ H
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+++N + V+ +LI MY G + AR++FD M A+++ +WNS+V G A L
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 234 SAHALFDVM------------------------PDK---------------NLVTWNIMI 254
A AL M P+K N+V+W +
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 255 SGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSR 314
SG K N ALK+F +M G+ NA TM ++ G + L G+ VHG +R
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Query: 315 SSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ TAL+DMY K ++ A +F + N++L SWN M++G+ + G E+G++ F M
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM 488
Query: 375 VGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFG 434
+ ++PD +TF + G YF M +G
Sbjct: 489 LE--------------------AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYG 528
Query: 435 LKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYL 494
+ P H CM +LL +G +DEA ++ M+ + ++ +W L+ C+ RD+ L
Sbjct: 529 IIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS-----LKPDATIWGAFLSSCKIHRDLEL 583
Query: 495 GEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKY 554
E K L + P N A Y ++ +Y+ +WE+V ++ LM+ R+ + S + +
Sbjct: 584 AEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQ 643
Query: 555 IVHNFKVSEKRH 566
VH F K H
Sbjct: 644 TVHIFYAEGKTH 655
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 135/252 (53%), Gaps = 12/252 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSY--TFVPLIGSCGNTGCIVSGRK 171
D N ++ +S + A V FR ++F +Y T V L+ C N GR+
Sbjct: 53 DDLAWNEIVMVNLRSGNWEKA-VELFREMQFSG-AKAYDSTMVKLLQVCSNKEGFAEGRQ 110
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
H V++ G +S + + NSLI MY+ G ++++R +F+SM R+L+SWNS++ Y + G
Sbjct: 111 IHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGY 170
Query: 232 LSSAHALFDVM------PDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
+ A L D M PD +VTWN ++SG+ A+ + + M GLK + +++
Sbjct: 171 VDDAIGLLDEMEICGLKPD--IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ A LK G+++HG I+R + ++T LIDMY K + A VF+ M
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 346 RNLVSWNAMILG 357
+N+V+WN+++ G
Sbjct: 289 KNIVAWNSLVSG 300
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 21/222 (9%)
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
L A+ LFD MP ++ + WN ++ L++ N A++LFREM G K +TMV ++
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
C EGR +HG ++R+ S++ + +LI MY + ++EL+ +VF M +RNL SW
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW 158
Query: 352 NAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXX 411
N+++ + G +D + L DEM + L+PD VT+ +
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEM--------------------EICGLKPDIVTWNSLLS 198
Query: 412 XXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAG 453
+ K+M + GLKP+ + + + +A G
Sbjct: 199 GYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPG 239
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 197/423 (46%), Gaps = 56/423 (13%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
+++ Y V AR +FD M + SW SM+ GY++ G + A LF+VMP K ++
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI 266
Query: 249 TWNIMISGF---------------LKARNPGY----------------ALKLFREMGSVG 277
N MISG +K RN AL LF M G
Sbjct: 267 ACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQG 326
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELAT 337
++ T++ +++ C A L G+ VH ++R + + + L+ MY KC + +
Sbjct: 327 VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSK 386
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVV 397
+F+R +++++ WN++I G+ HG E+ L +F EM + G
Sbjct: 387 LIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM----PLSGST------------- 429
Query: 398 RLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDE 457
+P+EVTF+ G ++ M VFG+KP AH CM ++L AG +E
Sbjct: 430 --KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNE 487
Query: 458 AEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLL 517
A + + +M + ++ +W +LL CR + + E AK L+++ P+N Y L
Sbjct: 488 AMEMIDSMT-----VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLS 542
Query: 518 IIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNF-KVSEKRHEGIEAVNMMM 576
+YA +W +V+ ++KLMK R + PG S +++ VH F + H E++ ++
Sbjct: 543 NMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKIL 602
Query: 577 DEL 579
DEL
Sbjct: 603 DEL 605
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
N L+ Y G++ AR +FD M R++ SW ++V GY+ G + A +LF MP+KN V
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
+W +M+ GFL+ A KL+ EM + K N + C + R+ E R + +
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLY-EM--IPDKDNIARTSMIHGLC-KEGRVDEAREIFDEM 198
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGL 368
S S+I T ++ Y + RV+ A ++F+ M + VSW +M++G+ +G ED
Sbjct: 199 ----SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 369 SLFDEM 374
LF+ M
Sbjct: 255 ELFEVM 260
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 186 PVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDK 245
P N I + G + AR LFDS ++ ++SWNSMV GY A LFD MPD+
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR 77
Query: 246 NLVTWNIMISGFLKARNPGYALKLFREM------------------GSVGL--------- 278
N+++WN ++SG++K A K+F M G V +
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATR 338
+ N + ++ + R+ + ++ M I T++I CK RV+ A
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLY----EMIPDKDNIARTSMIHGLCKEGRVDEARE 193
Query: 339 VFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+F+ M+ R++++W M+ G+ + +D +FD M
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P T + ++ C + + G++ HAQ+++ FD + V + L+ MY CG++ ++++
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMP-----DKNLVTWNIMISGFLKARN 262
FD ++D+ WNS++ GY G A +F MP N VT+ +S A
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 263 PGYALKLFREMGSV-GLKGNATTMVCVVTACGRSARLKEG 301
LK++ M SV G+K C+V GR+ R E
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEA 488
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 75/184 (40%), Gaps = 39/184 (21%)
Query: 188 QNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNL 247
+ S+IH G V AR +FD M R + +W +MV GY + + A +FDVMP+K
Sbjct: 175 RTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE 234
Query: 248 VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGS 307
V+W M+ G+++ A +LF M V V AC
Sbjct: 235 VSWTSMLMGYVQNGRIEDAEELFEVMP-----------VKPVIAC--------------- 268
Query: 308 IIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDG 367
A+I + + A RVF+ M RN SW +I H +G +
Sbjct: 269 -------------NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEA 315
Query: 368 LSLF 371
L LF
Sbjct: 316 LDLF 319
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 223/491 (45%), Gaps = 67/491 (13%)
Query: 119 NTVISAYCKS-HDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
N +I+ Y ++ HD +F NS T ++ +C +G H V+
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
K G D VQN+L+ MY+ G + A
Sbjct: 433 KRGLDRDRFVQNTLMDMYS-------------------------------RLGKIDIAMR 461
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGS-----------VGLKGNATTMV 286
+F M D++LVTWN MI+G++ + + AL L +M + V LK N+ T++
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 287 CVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR 346
++ +C + L +G+ +H I+ + + + +AL+DMY KC ++++ +VF+++ +
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 347 NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTF 406
N+++WN +I+ + +HG+ ++ + L M+ V+G ++P+EVTF
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMM----VQG----------------VKPNEVTF 621
Query: 407 IGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMA 466
I + G F M +G++P+ H C+ +LL AG + EA + + M
Sbjct: 622 ISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Query: 467 KFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQW 526
+ D ++ W++LL R ++ +GE A+ L+ + P + Y L IY+ A W
Sbjct: 682 R---DFNKAGA-WSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 737
Query: 527 ENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRMP 586
+ + V++ MKE+ + PG S ++ VH F + H E ++ ++ L R R
Sbjct: 738 DKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 797
Query: 587 SVDSGQSSVRH 597
S V H
Sbjct: 798 GYVPDTSCVLH 808
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 170/382 (44%), Gaps = 57/382 (14%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
F+ TL++ L + + ++ F D NTV+S+ C+ ++ L + Y R +
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQ-NEQLLEALEYLREMV 294
Query: 144 FRFF-PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNG-FDSVLPVQNSLIHMYADCGDV 201
P+ +T ++ +C + + +G++ HA +KNG D V ++L+ MY +C V
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKAR 261
R +FD M D+ + WN MI+G+ +
Sbjct: 355 LSGR-------------------------------RVFDGMFDRKIGLWNAMIAGYSQNE 383
Query: 262 NPGYALKLFREMG-SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII-RMFSRSSLIL 319
+ AL LF M S GL N+TTM VV AC RS ++HG ++ R R +
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 443
Query: 320 DTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDK 379
+T L+DMY + ++++A R+F +M +R+LV+WN MI G+ ED L L +M +++
Sbjct: 444 NT-LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 380 VKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNF 439
S A R V L+P+ +T + I G+ + +K N
Sbjct: 503 -------KVSKGASR--VSLKPNSITLMTILPSCAALSALAKGKE-----IHAYAIKNNL 548
Query: 440 AHLWCMANLLANAGLVDEAEKC 461
A ++ + LVD KC
Sbjct: 549 A-----TDVAVGSALVDMYAKC 565
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 39/268 (14%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGC---IVSGRKCHAQ 175
N++IS+ C +A + L P+S+T V ++ +C N ++ G++ HA
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 227
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSA 235
++ G + + N+L+ MY G + ++VL S RDL +WN+++ + L
Sbjct: 228 GLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLE- 285
Query: 236 HALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRS 295
AL+ REM G++ + T+ V+ AC
Sbjct: 286 ------------------------------ALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 296 ARLKEGRSVHGSIIRMFS-RSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAM 354
L+ G+ +H ++ S + + +AL+DMYC C++V RVF+ M +R + WNAM
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 355 ILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
I G+ + ++ L LF +GM++ G
Sbjct: 376 IAGYSQNEHDKEALLLF---IGMEESAG 400
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 23/251 (9%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKS--HDPHLAQVFYFRS 141
F+ TL+ S L +D + IF + D NT+I+ Y S H+ L + ++
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 142 L---------RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLI 192
L R PNS T + ++ SC + G++ HA IKN + + V ++L+
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559
Query: 193 HMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVM----PDKNLV 248
MYA CG +Q++R +FD + +++ +WN ++ Y G+ A L +M N V
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619
Query: 249 TWNIMISGFLKARNPGY---ALKLFREMG-SVGLKGNATTMVCVVTACGRSARLKEGRSV 304
T+ IS F + G L++F M G++ ++ CVV GR+ R+KE +
Sbjct: 620 TF---ISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 305 HGSIIRMFSRS 315
+ R F+++
Sbjct: 677 MNMMPRDFNKA 687
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 38/233 (16%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGF--DSVLPVQNSLIHMYADCGDVQVAR 205
P++Y F L+ + + + G++ HA V K G+ DSV V N+L+++Y CG
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSV-TVANTLVNLYRKCG------ 147
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
D + + +FD + ++N V+WN +IS
Sbjct: 148 -------------------------DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGR---SARLKEGRSVHGSIIRMFSRSSLILDTA 322
AL+ FR M ++ ++ T+V VVTAC L G+ VH +R +S I++T
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT- 241
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
L+ MY K ++ + + R+LV+WN ++ C + + L EMV
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 198/441 (44%), Gaps = 60/441 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT N++IS Y ++ A + + F P+ T V ++G+C + G + +GR
Sbjct: 197 DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLE 256
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
I + + LI MY CGD L
Sbjct: 257 EMAITKKIGLSTFLGSKLISMYGKCGD-------------------------------LD 285
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
SA +F+ M K+ V W MI+ + + A KLF EM G+ +A T+ V++ACG
Sbjct: 286 SARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACG 345
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
L+ G+ + + + ++ + T L+DMY KC RVE A RVFE M +N +WNA
Sbjct: 346 SVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNA 405
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
MI + G ++ L LFD M + P ++TFIG+
Sbjct: 406 MITAYAHQGHAKEALLLFDRM-----------------------SVPPSDITFIGVLSAC 442
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
G YF +M+ +FGL P H + +LL+ AG++DEA + M +F G
Sbjct: 443 VHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEF---MERFPG--K 497
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMY-PKNLACYQFLLIIYAVAAQWENVSTV 532
+ ++ A +L C R+DV + E+ ++L++M KN Y + A W+ + +
Sbjct: 498 PDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKM 557
Query: 533 QKLMKERRLGIIPGSSLVDLK 553
+ LM++R + PG S ++++
Sbjct: 558 RALMRDRGVVKTPGCSWIEIE 578
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 35/314 (11%)
Query: 89 LLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF- 147
L+ +A L +++ +F P + + N +I + + H A + +R ++F
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTEEP-NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLK 129
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ +T+ + +C I GR H+ + K G + + + +SLI MYA C
Sbjct: 130 PDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKC--------- 180
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
G + A LFD + +++ V+WN MISG+ +A A+
Sbjct: 181 ----------------------GQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAM 218
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
LFR+M G + + T+V ++ AC L+ GR + I S L + LI MY
Sbjct: 219 DLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMY 278
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM--VGMDKVKGEVE 385
KC ++ A RVF +M ++ V+W AMI + +G + LF EM G+ G +
Sbjct: 279 GKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLS 338
Query: 386 IDESPCADRGVVRL 399
S C G + L
Sbjct: 339 TVLSACGSVGALEL 352
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 187 VQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKN 246
++ + + C V R + ML + N ++ +E GD + + LF V + N
Sbjct: 36 LERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPN 95
Query: 247 LVTWNIMISGFLKARNP-GYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVH 305
++N MI G N AL L+R M GLK + T V AC + + GRSVH
Sbjct: 96 HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 306 GSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPE 365
S+ ++ + ++ +LI MY KC +V A ++F+ +T R+ VSWN+MI G+ G +
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 366 DGLSLFDEM 374
D + LF +M
Sbjct: 216 DAMDLFRKM 224
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 6/200 (3%)
Query: 107 RYFNNPL--DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
R FN + D +I+ Y ++ A +F + P++ T ++ +CG+ G
Sbjct: 289 RVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
+ G++ + + V L+ MY CG V+ A +F++M ++ A+WN+M+
Sbjct: 349 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 225 GYLEAGDLSSAHALFDVM--PDKNLVTWNIMISGFLKARNPGYALKLFREMGSV-GLKGN 281
Y G A LFD M P + +T+ ++S + A + F EM S+ GL
Sbjct: 409 AYAHQGHAKEALLLFDRMSVPPSD-ITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPK 467
Query: 282 ATTMVCVVTACGRSARLKEG 301
++ R+ L E
Sbjct: 468 IEHYTNIIDLLSRAGMLDEA 487
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 217/481 (45%), Gaps = 29/481 (6%)
Query: 99 VDFTLLIFRYFNNPL--DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPL 156
+D L +F + NP DT NT+I+ Y ++ A + ++F +
Sbjct: 209 IDKALSVF--WRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAV 266
Query: 157 IGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDL 216
+ + + G++ HA+V+KNG S V + ++ +Y CG+++ A +L
Sbjct: 267 LNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNL 326
Query: 217 ASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFRE-MGS 275
S +SM+ GY G + A LFD + +KNLV W M G+L R P L+L R + +
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIAN 386
Query: 276 VGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVEL 335
++ MV V+ AC A ++ G+ +HG +R L TA +DMY KC VE
Sbjct: 387 ETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEY 446
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRG 395
A R+F+ R+ V +NAMI G HG F++M + G
Sbjct: 447 AERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT-----------------EGG 489
Query: 396 VVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLV 455
+PDE+TF+ + G YFK M + + + P H CM +L A +
Sbjct: 490 ---FKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRL 546
Query: 456 DEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQF 515
D+A + + + + + D +++ L C + ++ L ++ + L+ + N + Y
Sbjct: 547 DKAIELMEGIDQVEKD----AVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQ 602
Query: 516 LLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMM 575
+ YA + +W+ + ++ M+ + L I G S ++ H F S+ H EA+ M
Sbjct: 603 IANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAM 662
Query: 576 M 576
+
Sbjct: 663 L 663
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 7/277 (2%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYF----RSLRFRFFPNSYTFVPLIGSC 160
+F N D NT++S + K+ + F R + + + +T ++
Sbjct: 76 LFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLS 135
Query: 161 GNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR--DLAS 218
+ G + H ++K G D +SLIHMY+ CG + +F+ D +
Sbjct: 136 AKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVA 195
Query: 219 WNSMVDGYLEAGDLSSAHALFDVMPDKN-LVTWNIMISGFLKARNPGYALKLFREMGSVG 277
N+M+ Y GD+ A ++F P+ N ++WN +I+G+ + ALK+ M G
Sbjct: 196 RNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENG 255
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELAT 337
LK + + V+ LK G+ VH +++ S S+ + + ++D+YCKC ++ A
Sbjct: 256 LKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAE 315
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
NL S ++MI+G+ G + LFD +
Sbjct: 316 SAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSL 352
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 7/214 (3%)
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
C+ G H + IK+G N L+++Y+ G ++ AR +FD ML R++ SWN+++
Sbjct: 3 CLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIA 62
Query: 225 GYLEAGDLSSAHALFDVMP-DKNLVTWNIMISGFLKARN-PGYALKLFREMGSVGLKGNA 282
Y++ ++ A LF+ +++L+T+N ++SGF K A+++F EM
Sbjct: 63 AYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIW 122
Query: 283 TTMVCVVTACGRSARLKE---GRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
V T SA+L G +HG +++ + + ++LI MY KC + + +
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 340 FER--MTNRNLVSWNAMILGHCIHGSPEDGLSLF 371
F + + V+ NAMI +C G + LS+F
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVF 216
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 221/471 (46%), Gaps = 32/471 (6%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
LD VI + K A + R L PN +TF +IGS + + G++
Sbjct: 56 LDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQL 115
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H +K G S + V +++++ Y + AR FD ++ S +++ GYL+ +
Sbjct: 116 HCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEF 175
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK-GNATTMVCVVTA 291
A +LF MP++++VTWN +I GF + A+ F +M G+ N +T C +TA
Sbjct: 176 EEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITA 235
Query: 292 CGRSARLKEGRSVHGSIIRMF-SRSSLILDTALIDMYCKCRRVELATRVFERM--TNRNL 348
A G+S+H I+ R ++ + +LI Y KC +E + F ++ RN+
Sbjct: 236 ISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNI 295
Query: 349 VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIG 408
VSWN+MI G+ +G E+ +++F++MV L+P+ VT +G
Sbjct: 296 VSWNSMIWGYAHNGRGEEAVAMFEKMVKD-------------------TNLRPNNVTILG 336
Query: 409 IXXXXXXXXXXXXGRSYFKQMTDVFGLKPN---FAHLWCMANLLANAGLVDEAEKCLRNM 465
+ G YF + + + PN H CM ++L+ +G EAE+ +++M
Sbjct: 337 VLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Query: 466 AKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQ 525
D + W LL C+ + L + A ++++ P++++ Y L Y+
Sbjct: 396 P-LDPGIG----FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMEN 450
Query: 526 WENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMM 576
W+NVS +++ MKE L G S ++++ + F ++K +E + V M+
Sbjct: 451 WQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 79/149 (53%)
Query: 226 YLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
++++ + +AH +FD +P+ ++++ +I F+K A + F+ + +G++ N T
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
V+ + S +K G+ +H ++M S++ + +A+++ Y K + A R F+ +
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
N+VS +I G+ E+ LSLF M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAM 185
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/513 (23%), Positives = 223/513 (43%), Gaps = 65/513 (12%)
Query: 109 FNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVS 168
F D F +IS + + A + + PN+ T + + +C I
Sbjct: 311 FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQ 370
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLE 228
G + H+ +K GF + V NSL+ MY+ CG ++ AR +FDS+ +D+ +WNSM+ GY +
Sbjct: 371 GSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQ 430
Query: 229 AGDLSSAHALFDVMPDKNL----------------------------------------V 248
AG A+ LF M D NL
Sbjct: 431 AGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTA 490
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
TWN++I+G+++ AL+LFR+M N+ T++ ++ AC K R +HG +
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV 550
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGL 368
+R + + AL D Y K +E + +F M +++++WN++I G+ +HGS L
Sbjct: 551 LRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPAL 610
Query: 369 SLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQ 428
+LF++M K +G + P+ T I G+ F
Sbjct: 611 ALFNQM----KTQG----------------ITPNRGTLSSIILAHGLMGNVDEGKKVFYS 650
Query: 429 MTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRF 488
+ + + + P H M L A ++EA + ++ M ++ E+ +W + L CR
Sbjct: 651 IANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM-----NIQSETPIWESFLTGCRI 705
Query: 489 RRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSS 548
D+ + A+ L + P+N A + IYA+ A+ K ++ L G S
Sbjct: 706 HGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQS 765
Query: 549 LVDLKYIVHNFKVSEKRHEGIEAVNMMMDELAR 581
++++ ++H F ++ + + ++++++R
Sbjct: 766 WIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSR 798
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 39/298 (13%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQ 175
F + +I AY + + + ++ P+ + F ++ C N G + +G+ H+
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSV 206
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSA 235
VIK G S L V NS++ +YA CG++ A F M RD+ +WNS++ Y + G A
Sbjct: 207 VIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEA 266
Query: 236 HALFDVMPDKN----LVTWNI-----------------------------------MISG 256
L M + LVTWNI MISG
Sbjct: 267 VELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISG 326
Query: 257 FLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSS 316
+ AL +FR+M G+ NA T++ V+AC + +G VH ++M
Sbjct: 327 LIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDD 386
Query: 317 LILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+++ +L+DMY KC ++E A +VF+ + N+++ +WN+MI G+C G LF M
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM 444
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 32/223 (14%)
Query: 152 TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM 211
T++ L+ SC ++G I GR HA+ V V+ L+ MYA CG + AR
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHARFGLFTEPDVF-VETKLLSMYAKCGCIADAR------ 135
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
+FD M ++NL TW+ MI + + KLFR
Sbjct: 136 -------------------------KVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
M G+ + ++ C ++ G+ +H +I++ S L + +++ +Y KC
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
++ AT+ F RM R++++WN+++L +C +G E+ + L EM
Sbjct: 231 ELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEM 273
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 208/451 (46%), Gaps = 37/451 (8%)
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
R R + + V L G C + ++ H +K G + + V N+L+ MY CG V
Sbjct: 104 RKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVS 163
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
+ +F+ + + + SW ++D ++ L +F MP++N V W +M++G+L A
Sbjct: 164 EVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGF 223
Query: 263 PGYALKLFREMG-SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-------FSR 314
L+L EM G N T+ +++AC +S L GR VH ++ S
Sbjct: 224 TREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASY 283
Query: 315 SSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+++ TAL+DMY KC ++ + VF M RN+V+WNA+ G +HG
Sbjct: 284 DDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHG------------ 331
Query: 375 VGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFG 434
KG + ID P R V +PD++TF + G F + +G
Sbjct: 332 ------KGRMVIDMFPQMIREV---KPDDLTFTAVLSACSHSGIVDEGWRCFHSLR-FYG 381
Query: 435 LKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYL 494
L+P H CM +LL AGL++EAE +R M + ++ +LL C V +
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMP-----VPPNEVVLGSLLGSCSVHGKVEI 436
Query: 495 GEQFAKLLVDMYPKNLACYQFLLI-IYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLK 553
E+ + L+ M P N YQ L+ +Y + + ++ +++R + IPG S + +
Sbjct: 437 AERIKRELIQMSPGNTE-YQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVN 495
Query: 554 YIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
VH F ++ H + + + ++E+ R R
Sbjct: 496 DSVHRFSSGDRSHPRTKEIYLKLNEVIERIR 526
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMP--DKNLVTWNIMISGFLKARNPGYALKLFREMGSVG 277
N++ Y +G++ +A LFD +P +K+ V W ++S F + ++KLF EM
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELAT 337
++ + ++VC+ C + L + HG ++M +S+ + AL+DMY KC V
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
R+FE + +++VSW ++ E G +F EM
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 190/410 (46%), Gaps = 28/410 (6%)
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSA 235
V+KN DSV NSLI + A LF+ M +D+ SW M+ G+ G++S
Sbjct: 335 VMKNK-DSV--SWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 236 HALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRS 295
LF +MP+K+ +TW MIS F+ AL F +M + N+ T V++A
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 296 ARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
A L EG +HG +++M + L + +L+ MYCKC A ++F ++ N+VS+N MI
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMI 511
Query: 356 LGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXX 415
G+ +G + L LF + K +P+ VTF+ +
Sbjct: 512 SGYSYNGFGKKALKLFSMLESSGK--------------------EPNGVTFLALLSACVH 551
Query: 416 XXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRE 475
G YFK M + ++P H CM +LL +GL+D+A + M
Sbjct: 552 VGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMP-----CKPH 606
Query: 476 SMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKL 535
S +W +LL+ + V L E AK L+++ P + Y L +Y++ + + + +
Sbjct: 607 SGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNI 666
Query: 536 MKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRM 585
K +R+ PGSS + LK VHNF ++ +E + + + + +
Sbjct: 667 KKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEMEL 716
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 182 DSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDV 241
DSV N L+ Y G A +F M +++ S +SMV GY + G + A +LFD
Sbjct: 176 DSV--ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDR 233
Query: 242 MPDKNLVTWNIMISGFLKAR--NPGYALKL-FREMGSVGLKGNATTMVCVVTACGRSARL 298
M ++N++TW MI G+ KA G+ L L R+ G V K N+ T+ + AC R
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV--KVNSNTLAVMFKACRDFVRY 291
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
+EG +HG + RM L L +L+ MY K + A VF M N++ VSWN++I G
Sbjct: 292 REGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGL 351
Query: 359 CIHGSPEDGLSLFDEMVGMDKV-----------KGEVEIDESPCADRGVVRLQPDEVTFI 407
+ LF++M G D V KGE+ S C + + + D +T+
Sbjct: 352 VQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEI----SKCVELFGMMPEKDNITWT 407
Query: 408 GI 409
+
Sbjct: 408 AM 409
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 38/234 (16%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
NS I +A G++Q A +F M R + SW +M+ Y E G +S A +FD MP +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 249 TWNIMISGFLKAR-NPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGS 307
++N MI+ +K + + G A +LF ++ + NA + ++T R+ R E ++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIP----EKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 308 I--------------------------IRMF---SRSSLILDTALIDMYCKCRRVELATR 338
+R+F + ++ ++++ YCK R+ A
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 339 VFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCA 392
+F+RMT RN+++W AMI G+ G EDG LF M + +G+V+++ + A
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM----RQEGDVKVNSNTLA 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D +ISA+ + A ++ + L+ PNSYTF ++ + + ++ G + H
Sbjct: 402 DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+V+K + L VQNSL+ MY CG+ A +F + ++ S+N+M+ GY G
Sbjct: 462 GRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGK 521
Query: 234 SAHALFDVM----PDKNLVTWNIMISGFLKARNPGYALKLFREM-GSVGLKGNATTMVCV 288
A LF ++ + N VT+ ++S + K F+ M S ++ C+
Sbjct: 522 KALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACM 581
Query: 289 VTACGRSARLKEGRSV 304
V GRS L + ++
Sbjct: 582 VDLLGRSGLLDDASNL 597
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 216/505 (42%), Gaps = 57/505 (11%)
Query: 83 PFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSL 142
PF+ +L+S S+ DF +F + D +I + ++ A V++
Sbjct: 138 PFVRNSLISGYSSSGLFDFASRLFDGAEDK-DVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
+ N T V ++ + G + GR H +Y + G V+
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHG-------------------LYLETGRVK 237
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
D+ +S+VD Y + A +FD MP +N+VTW +I+G++++R
Sbjct: 238 C-----------DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRC 286
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
+ +F EM + N T+ V++AC L GR VH +I+ + T
Sbjct: 287 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTT 346
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
LID+Y KC +E A VFER+ +N+ +W AMI G HG D LF M+
Sbjct: 347 LIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLS------ 400
Query: 383 EVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHL 442
+ P+EVTF+ + GR F M F ++P H
Sbjct: 401 --------------SHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 443 WCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLL 502
CM +L GL++EA+ + M M +++W L C +D LG+ A +
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMP-----MEPTNVVWGALFGSCLLHKDYELGKYAASRV 501
Query: 503 VDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNF-KV 561
+ + P + Y L +Y+ + W+ V+ V+K MK++++ PG S +++K + F
Sbjct: 502 IKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAF 561
Query: 562 SEKRHEGIEAVNMMMDELARRFRMP 586
+K+ + + +D + + R+P
Sbjct: 562 DDKKPLESDDLYKTLDTVGVQMRLP 586
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 35/253 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ +TF PL+ + + + HA ++K G DS V+NSLI Y+ G A L
Sbjct: 102 PSRHTFPPLLKAVFKLR-DSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRL 160
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD +D+ +W +M+DG++ G S A+
Sbjct: 161 FDGAEDKDVVTWTAMIDGFVRNGSASE-------------------------------AM 189
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS-RSSLILDTALIDM 326
F EM G+ N T+V V+ A G+ ++ GRSVHG + + + + ++L+DM
Sbjct: 190 VYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM 249
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y KC + A +VF+ M +RN+V+W A+I G+ + G+ +F+EM+ D E +
Sbjct: 250 YGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTL 309
Query: 387 DE--SPCADRGVV 397
S CA G +
Sbjct: 310 SSVLSACAHVGAL 322
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 179/367 (48%), Gaps = 29/367 (7%)
Query: 197 DCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNI 252
D D++V R + ++ R D +N ++ Y+E+G A +FD M ++N+VTWN
Sbjct: 248 DLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNS 307
Query: 253 MISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMF 312
+IS K LFR+M + + T+ ++ AC R A L G+ +H I++
Sbjct: 308 LISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSK 367
Query: 313 SRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFD 372
+ + L +L+DMY KC VE + RVF+ M ++L SWN M+ + I+G+ E+ ++LF+
Sbjct: 368 EKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFE 427
Query: 373 EMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDV 432
M+ ES A PD +TF+ + G S F++M
Sbjct: 428 WMI------------ESGVA--------PDGITFVALLSGCSDTGLTEYGLSLFERMKTE 467
Query: 433 FGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDV 492
F + P H C+ ++L AG + EA K + M + +W +LL CR +V
Sbjct: 468 FRVSPALEHYACLVDILGRAGKIKEAVKVIETMP-----FKPSASIWGSLLNSCRLHGNV 522
Query: 493 YLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDL 552
+GE AK L + P N Y + IYA A W+NV ++++MK+R + G S V +
Sbjct: 523 SVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQV 582
Query: 553 KYIVHNF 559
K + F
Sbjct: 583 KDKIQIF 589
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 119 NTVISAYCKSHDPHLAQVF-YFRSLRFRFFPNSY-TFVPLIGSCGNTGCIVSGRKCHAQV 176
N++IS K H ++F FR ++ S+ T ++ +C +++G++ HAQ+
Sbjct: 306 NSLISVLSKKVRVH--EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI 363
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
+K+ +P+ NSL+ MY CG+V+ +R +FD ML +DLASWN M++ Y G++
Sbjct: 364 LKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVI 423
Query: 237 ALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGS-VGLKGNATTMVCVVTA 291
LF+ M + + +T+ ++SG Y L LF M + + C+V
Sbjct: 424 NLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDI 483
Query: 292 CGRSARLKEGRSV 304
GR+ ++KE V
Sbjct: 484 LGRAGKIKEAVKV 496
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Query: 232 LSSAHALFDVMPDKNLVT---WNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCV 288
L A +FD + D +L+T W M G+ + +P AL ++ +M ++ ++
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVA 242
Query: 289 VTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL 348
+ AC L+ GR +H I++ + ++ L+ +Y + + A +VF+ M+ RN+
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 349 VSWNAMI 355
V+WN++I
Sbjct: 303 VTWNSLI 309
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 195/447 (43%), Gaps = 69/447 (15%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK-------NGFDSVLPVQNSLIHMYADCGD 200
PN T + ++ C + G ++ G++ H IK NG V N LI MYA C
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMP--DKNLVTWNIMISGFL 258
V AR A+FD + ++++VTW +MI G+
Sbjct: 423 VDTAR-------------------------------AMFDSLSPKERDVVTWTVMIGGYS 451
Query: 259 KARNPGYALKLFREM--GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRS- 315
+ + AL+L EM + NA T+ C + AC A L+ G+ +H +R +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 316 SLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
L + LIDMY KC + A VF+ M +N V+W +++ G+ +HG E+ L +FDEM
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM- 570
Query: 376 GMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGL 435
+ + D VT + + G YF +M VFG+
Sbjct: 571 -------------------RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGV 611
Query: 436 KPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLG 495
P H C+ +LL AG ++ A + + M M ++W L+ CR V LG
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAALRLIEEMP-----MEPPPVVWVAFLSCCRIHGKVELG 666
Query: 496 EQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYI 555
E A+ + ++ + Y L +YA A +W++V+ ++ LM+ + + PG S V+
Sbjct: 667 EYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKG 726
Query: 556 VHNFKVSEKRH-EGIEAVNMMMDELAR 581
F V +K H E +++D + R
Sbjct: 727 TTTFFVGDKTHPHAKEIYQVLLDHMQR 753
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 146/281 (51%), Gaps = 18/281 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLA-QVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D N++I +Y K P +A ++F + F P++ T V ++ C + G G++
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H + + + V N L+ MYA CG + A +F +M +D+ SWN+MV GY + G
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRF 311
Query: 233 SSAHALFDVMPDK----NLVTWNIMISGFLKARNPGY-ALKLFREMGSVGLKGNATTMVC 287
A LF+ M ++ ++VTW+ ISG+ + R GY AL + R+M S G+K N T++
Sbjct: 312 EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ-RGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 288 VVTACGRSARLKEGRSVHGSIIRM--------FSRSSLILDTALIDMYCKCRRVELATRV 339
V++ C L G+ +H I+ +++++ LIDMY KC++V+ A +
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ-LIDMYAKCKKVDTARAM 429
Query: 340 FERMT--NRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
F+ ++ R++V+W MI G+ HG L L EM D
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 148/354 (41%), Gaps = 80/354 (22%)
Query: 103 LLIFRYFNNPLDTFCVNTVISAYCKSH--------DPHLAQVFYFRSL------------ 142
LL F L + ++T IS C SH P A V+++ SL
Sbjct: 51 LLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANK 110
Query: 143 ---------RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIH 193
+ P++YTF + +CG + G HA + GF S + V N+L+
Sbjct: 111 CLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVA 170
Query: 194 MYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIM 253
MY+ C + AR +FD M D+ SWNS+++ Y + G
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG----------------------- 207
Query: 254 ISGFLKARNPGYALKLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMF 312
P AL++F M G + + T+V V+ C G+ +H +
Sbjct: 208 --------KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259
Query: 313 SRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFD 372
++ + L+DMY KC ++ A VF M+ +++VSWNAM+ G+ G ED + LF+
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319
Query: 373 EM----VGMDKVKGEVEIDESPCADR-------GVVR------LQPDEVTFIGI 409
+M + MD V I S A R GV R ++P+EVT I +
Sbjct: 320 KMQEEKIKMDVVTWSAAI--SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 144/346 (41%), Gaps = 35/346 (10%)
Query: 168 SGRKCHAQVIKNGFDSVLP-VQNSLIHMYADCGDVQVARVLFDSMLARDLASWN---SMV 223
+ K H + + F + P + IH C + +++ +L+ + + N ++
Sbjct: 10 AAAKSHQYIKVSLFSTSAPEITPPFIH---KCKTISQVKLIHQKLLSFGILTLNLTSHLI 66
Query: 224 DGYLEAGDLSSAHALFDVMP--DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGN 281
Y+ G LS A +L P D + WN +I + L LF M S+ +
Sbjct: 67 STYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPD 126
Query: 282 ATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFE 341
T V ACG + ++ G S H + S++ + AL+ MY +CR + A +VF+
Sbjct: 127 NYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFD 186
Query: 342 RMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQP 401
M+ ++VSWN++I + G P+ L +F M +E C +P
Sbjct: 187 EMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT-----------NEFGC--------RP 227
Query: 402 DEVTFIGIXXXXXXXXXXXXGRSY--FKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAE 459
D +T + + G+ F +++ N C+ ++ A G++DEA
Sbjct: 228 DNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI---QNMFVGNCLVDMYAKCGMMDEAN 284
Query: 460 KCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDM 505
NM+ D +S +M+ A + RF V L E+ + + M
Sbjct: 285 TVFSNMSVKD-VVSWNAMV-AGYSQIGRFEDAVRLFEKMQEEKIKM 328
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 200/444 (45%), Gaps = 60/444 (13%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N + Y S P + Y R PN TF L+ +C + + +GR+ +V+K
Sbjct: 82 NMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLK 141
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
+GFD + V N+LIH+Y C S A +
Sbjct: 142 HGFDFDVYVGNNLIHLYGTCKKT-------------------------------SDARKV 170
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
FD M ++N+V+WN +++ ++ + F EM + TTMV +++ACG L
Sbjct: 171 FDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNL 228
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
G+ VH ++ + L TAL+DMY K +E A VFERM ++N+ +W+AMI+G
Sbjct: 229 SLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGL 288
Query: 359 CIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXX 418
+G E+ L LF +M+ V+ P+ VTF+G+
Sbjct: 289 AQYGFAEEALQLFSKMMKESSVR-------------------PNYVTFLGVLCACSHTGL 329
Query: 419 XXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESML 478
G YF +M + +KP H M ++L AG ++EA ++ M F+ D +++
Sbjct: 330 VDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP-FEPD----AVV 384
Query: 479 WANLLALCRFRR---DVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKL 535
W LL+ C D +GE+ K L+++ PK + +A A W + V+++
Sbjct: 385 WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRV 444
Query: 536 MKERRLGIIPGSSLVDLKYIVHNF 559
MKE ++ I G S ++L H F
Sbjct: 445 MKETKMKKIAGESCLELGGSFHRF 468
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 4/192 (2%)
Query: 185 LPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPD 244
L + +S+ H+ G + ++ + DS + +L +S+ A DL+ A L D
Sbjct: 20 LKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLS----LAKDLAFARTLLLHSSD 75
Query: 245 KNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSV 304
TWN++ G+ + +P ++ ++ EM G+K N T ++ AC L GR +
Sbjct: 76 STPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQI 135
Query: 305 HGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSP 364
+++ + + LI +Y C++ A +VF+ MT RN+VSWN+++ +G
Sbjct: 136 QVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195
Query: 365 EDGLSLFDEMVG 376
F EM+G
Sbjct: 196 NLVFECFCEMIG 207
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 56/416 (13%)
Query: 166 IVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDG 225
I+ GR H ++ GF + ++ +LI MY +C
Sbjct: 346 ILEGRTIHGYAMRRGFLPHMVLETALIDMYGEC--------------------------- 378
Query: 226 YLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G L SA +FD M +KN+++WN +I+ +++ AL+LF+E+ L ++TT+
Sbjct: 379 ----GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ A S L EGR +H I++ S+ I+ +L+ MY C +E A + F +
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVT 405
+++VSWN++I+ + +HG + LF EM+ R+ P++ T
Sbjct: 495 KDVVSWNSIIMAYAVHGFGRISVWLFSEMIA--------------------SRVNPNKST 534
Query: 406 FIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNM 465
F + G YF+ M +G+ P H CM +L+ G A++ L M
Sbjct: 535 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Query: 466 AKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQ 525
+ +W +LL R +D+ + E A+ + M N CY LL +YA A +
Sbjct: 595 P-----FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGR 649
Query: 526 WENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELAR 581
WE+V+ ++ LM+ + + S V+ K H F ++ H + ++D ++R
Sbjct: 650 WEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSR 705
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 122/275 (44%), Gaps = 32/275 (11%)
Query: 111 NPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGR 170
N D F N +I + A FY R + +++T+ +I S + G+
Sbjct: 91 NKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGK 150
Query: 171 KCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAG 230
K HA VIK GF S + V NSLI +Y G A +F+ M RD+ SWNSM+ GYL G
Sbjct: 151 KIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALG 210
Query: 231 DLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
D GF +L LF+EM G K + + + +
Sbjct: 211 D------------------------GF-------SSLMLFKEMLKCGFKPDRFSTMSALG 239
Query: 291 ACGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLV 349
AC K G+ +H +R +++ T+++DMY K V A R+F M RN+V
Sbjct: 240 ACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIV 299
Query: 350 SWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
+WN MI + +G D F +M + ++ +V
Sbjct: 300 AWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDV 334
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 200/464 (43%), Gaps = 82/464 (17%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N++IS Y D + + + L+ F P+ ++ + +G+C + G++ H
Sbjct: 195 DIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIH 254
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+++ ++ GDV V S++D Y + G++S
Sbjct: 255 CHAVRSRIET---------------GDVMVM---------------TSILDMYSKYGEVS 284
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV-GLKGNATTMVCVVTAC 292
A +F+ M +N+V WN+MI + + A F++M GL+ + T + ++ A
Sbjct: 285 YAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA- 343
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
+ + EGR++HG +R ++L+TALIDMY +C +++ A +F+RM +N++SWN
Sbjct: 344 ---SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWN 400
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX 412
++I + +G L LF E+ D S L PD T I
Sbjct: 401 SIIAAYVQNGKNYSALELFQEL-----------WDSS---------LVPDSTTIASILPA 440
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
GR + N L + ++ A G +++A KC F+ +
Sbjct: 441 YAESLSLSEGREIHAYIVKS-RYWSNTIILNSLVHMYAMCGDLEDARKC------FNHIL 493
Query: 473 SRESMLWANLL---ALCRFRR-DVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQ--- 525
++ + W +++ A+ F R V+L F++++ N + + LL +++
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWL---FSEMIASRVNPNKSTFASLLAACSISGMVDE 550
Query: 526 -WENVSTVQKLMKERRLGIIPG----SSLVDLKYIVHNFKVSEK 564
WE +++ R GI PG ++DL NF +++
Sbjct: 551 GWEYFESMK-----REYGIDPGIEHYGCMLDLIGRTGNFSAAKR 589
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 7/174 (4%)
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKAR 261
+V + + D L R L G+ ++ + A LFD M + WN+MI GF
Sbjct: 57 KVTKQVNDPALTRAL-------RGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCG 109
Query: 262 NPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT 321
A++ + M G+K + T V+ + + L+EG+ +H +I++ S + +
Sbjct: 110 LYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCN 169
Query: 322 ALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+LI +Y K A +VFE M R++VSWN+MI G+ G L LF EM+
Sbjct: 170 SLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML 223
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 195/425 (45%), Gaps = 55/425 (12%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ T ++ +C + ++ G+ H VI++ ++ + V SLI +Y CG+ +A +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F S +D+A +WN+MIS ++ N A+
Sbjct: 367 F-SKTQKDVAE------------------------------SWNVMISSYISVGNWFKAV 395
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
+++ +M SVG+K + T V+ AC + A L++G+ +H SI + +L +AL+DMY
Sbjct: 396 EVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMY 455
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
KC + A R+F + +++VSW MI + HG P + L FDEM
Sbjct: 456 SKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG--------- 506
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
L+PD VT + + G +F QM +G++P H CM +
Sbjct: 507 -----------LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMID 555
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
+L AG + EA + ++ + S + L + L + C + LG++ A+LLV+ YP
Sbjct: 556 ILGRAGRLLEAYEIIQQTP----ETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYP 611
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHE 567
+ + Y L +YA W+ V+ MKE L PG S +++ V +F ++ H
Sbjct: 612 DDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHL 671
Query: 568 GIEAV 572
E V
Sbjct: 672 RAENV 676
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 32/272 (11%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRF-FPNSYTFVPLIGSCGNT 163
+F F+ D + N+++S Y K+ H + R L P+S+TF +I + G
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV 223
G GR H V+K+G+ + V +SL+ MYA + + +FD M RD+ASWN+++
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 224 DGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
+ ++G+ AL+LF M S G + N+
Sbjct: 181 SCFYQSGEAEK-------------------------------ALELFGRMESSGFEPNSV 209
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
++ ++AC R L+ G+ +H ++ +++AL+DMY KC +E+A VF++M
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269
Query: 344 TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
++LV+WN+MI G+ G + + + + M+
Sbjct: 270 PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 231/533 (43%), Gaps = 104/533 (19%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D+ NT+I Y K + + +L +F P+ T ++ +CG+ + + +
Sbjct: 272 DSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIY 330
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
++K GF V+N LI +YA CGD+ AR +F+SM +D SWNS++ GY+++GDL
Sbjct: 331 NYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLM 390
Query: 234 SAHALFDVM----PDKNLVTW-----------------------------------NIMI 254
A LF +M + +T+ N +I
Sbjct: 391 EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALI 450
Query: 255 SGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGR-------------------- 294
+ K G +LK+F MG+ G+ T V++AC R
Sbjct: 451 DMYAKCGEVGDSLKIFSSMGT----GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 295 ---------------SARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
A + G+ +H ++R S L + ALI+MY KC +E ++RV
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRV 566
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRL 399
FERM+ R++V+W MI + ++G E L F +M G+V
Sbjct: 567 FERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM-----------------EKSGIV-- 607
Query: 400 QPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAE 459
PD V FI I G + F++M + + P H C+ +LL+ + + +AE
Sbjct: 608 -PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 460 KCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLII 519
+ ++ M + ++ +WA++L CR D+ E+ ++ ++++ P +
Sbjct: 667 EFIQAMP-----IKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNA 721
Query: 520 YAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAV 572
YA +W+ VS ++K +K++ + PG S +++ VH F + EA+
Sbjct: 722 YAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAI 774
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 33/301 (10%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
F + L+ + S+ +L +FR + + + N++I A+ K+ A FY +
Sbjct: 40 FFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE 99
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQV 203
+ P+ YTF +I +C G + Q++ GF+S
Sbjct: 100 SKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES-------------------- 139
Query: 204 ARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP 263
DL N++VD Y G L+ A +FD MP ++LV+WN +ISG+
Sbjct: 140 -----------DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 264 GYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTAL 323
AL+++ E+ + + ++ T+ V+ A G +K+G+ +HG ++ S ++++ L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 324 IDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGE 383
+ MY K RR A RVF+ M R+ VS+N MI G+ E+ + +F E +D+ K +
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE--NLDQFKPD 306
Query: 384 V 384
+
Sbjct: 307 L 307
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKC 172
D N++IS Y SH + + + L+ + P+S+T ++ + GN + G+
Sbjct: 171 DLVSWNSLISGY-SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H +K+G +SV+ V N L+ MY AR +FD M RD
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS---------------- 273
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
V++N MI G+LK ++++F E K + T+ V+ AC
Sbjct: 274 ---------------VSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRAC 317
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
G L + ++ +++ + LID+Y KC + A VF M ++ VSWN
Sbjct: 318 GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWN 377
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDK 379
++I G+ G + + LF M+ M++
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEE 404
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 210/464 (45%), Gaps = 56/464 (12%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
+ +++ Y ++ + A + R P+ YT V ++ +C + + G++ H+ ++K
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
GF+ R L + ++VD Y +AG L+ A
Sbjct: 351 LGFE-------------------------------RHLFATTALVDMYAKAGCLADARKG 379
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
FD + ++++ W +ISG+++ + AL L+R M + G+ N TM V+ AC A L
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
+ G+ VHG I+ + + +AL MY KC +E VF R N+++VSWNAMI G
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGL 499
Query: 359 CIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXX 418
+G ++ L LF+EM+ ++PD+VTF+ I
Sbjct: 500 SHNGQGDEALELFEEMLAEG--------------------MEPDDVTFVNIISACSHKGF 539
Query: 419 XXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESML 478
G YF M+D GL P H CM +LL+ AG + EA++ + + A D + L
Sbjct: 540 VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIES-ANIDHGLC----L 594
Query: 479 WANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKE 538
W LL+ C+ LG + L+ + + + Y L IY + +V V K M+
Sbjct: 595 WRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRA 654
Query: 539 RRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARR 582
+ G S ++LK H F V + H IE ++ ++R+
Sbjct: 655 NGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQ 698
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 38/230 (16%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P++ T + + +V+GR H Q+I+ G + + N L++ YA CG
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGK------- 64
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA- 266
L+ AH++F+ + K++V+WN +I+G+ ++N G +
Sbjct: 65 ------------------------LAKAHSIFNAIICKDVVSWNSLITGY--SQNGGISS 98
Query: 267 ----LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
++LFREM + + NA T+ + A GR H +++M S + +DT+
Sbjct: 99 SYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTS 158
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFD 372
L+ MYCK VE +VF M RN +W+ M+ G+ G E+ + +F+
Sbjct: 159 LVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYC-KSHDPHLAQVF-YFRSLRFRFFPNSYTFVPL 156
V+ L +F Y +T+ +T++S Y + +VF F + + Y F +
Sbjct: 169 VEDGLKVFAYMPER-NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAV 227
Query: 157 IGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDL 216
+ S T + GR+ H IKNG + + N+L+ MY+ C
Sbjct: 228 LSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES---------------- 271
Query: 217 ASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV 276
L+ A +FD D+N +TW+ M++G+ + A+KLF M S
Sbjct: 272 ---------------LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 277 GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELA 336
G+K + T+V V+ AC L+EG+ +H ++++ L TAL+DMY K + A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 337 TRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ F+ + R++ W ++I G+ + E+ L L+ M
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 69/379 (18%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVF----YFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVS 168
D N++I+ Y S + ++ + FR +R + PN+YT + + +
Sbjct: 79 DVVSWNSLITGY--SQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTV 136
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLE 228
GR+ HA V+K + V SL+ MY G V+ +F M R+ +W++MV GY
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 229 AGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCV 288
G + A +F++ FL+ + G + V
Sbjct: 197 RGRVEEAIKVFNL---------------FLREKEEG--------------SDSDYVFTAV 227
Query: 289 VTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL 348
+++ + + GR +H I+ + L AL+ MY KC + A ++F+ +RN
Sbjct: 228 LSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNS 287
Query: 349 VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIG 408
++W+AM+ G+ +G + + LF M ++P E T +G
Sbjct: 288 ITWSAMVTGYSQNGESLEAVKLFSRMFSAG--------------------IKPSEYTIVG 327
Query: 409 IXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEK--CLRNMA 466
+ G+ F LK F +L A LVD K CL +
Sbjct: 328 VLNACSDICYLEEGKQLHS-----FLLKLGFER-----HLFATTALVDMYAKAGCLADAR 377
Query: 467 K-FDGDMSRESMLWANLLA 484
K FD R+ LW +L++
Sbjct: 378 KGFDCLQERDVALWTSLIS 396
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 36/213 (16%)
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELAT 337
L + +T++ +T + L GR+VHG IIR + + + L++ Y KC ++ A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 338 RVFERMTNRNLVSWNAMILGHCIHG---SPEDGLSLFDEMVGMDKVKGEVEIDESPCADR 394
+F + +++VSWN++I G+ +G S + LF EM D
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQD---------------- 113
Query: 395 GVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLA---N 451
+ P+ T GI GR + + +F ++ +L+
Sbjct: 114 ----ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM----SSFGDIYVDTSLVGMYCK 165
Query: 452 AGLVDEAEKCLRNMAKFDGDMSRESMLWANLLA 484
AGLV++ K M + R + W+ +++
Sbjct: 166 AGLVEDGLKVFAYMPE------RNTYTWSTMVS 192
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 245/540 (45%), Gaps = 78/540 (14%)
Query: 84 FLARTLLSRASNLCGVDFTLLIF-RYFNNPLDTFCVNTVISAYCKS---HDP-HLAQVFY 138
L +LL+ + +++ ++F R F + T+ N +IS Y + D ++ Q+
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTW--NLIISGYVQQGLVEDAIYMCQLMR 367
Query: 139 FRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADC 198
L++ + T L+ + T + G++ I++ F+S + + ++++ MYA C
Sbjct: 368 LEKLKY----DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC 423
Query: 199 GDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMP----DKNLVTWNIMI 254
G + A+ +FDS + +DL WN+++ Y E+G A LF M N++TWN++I
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 255 SG-------------FLKARNPGY----------------------ALKLFREMGSVGLK 279
FL+ ++ G A+ R+M GL+
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR 543
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLI-LDTALIDMYCKCRRVELATR 338
NA ++ ++AC A L GR++HG IIR SSL+ ++T+L+DMY KC + A +
Sbjct: 544 PNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEK 603
Query: 339 VFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVR 398
VF L NAMI + ++G+ ++ ++L+ + G V
Sbjct: 604 VFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEG--------------------VG 643
Query: 399 LQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEA 458
L+PD +T + F + +KP H M +LLA+AG E
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG---ET 700
Query: 459 EKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLI 518
EK LR + + ++ + +L+A C +R L + ++ L++ P+N Y +
Sbjct: 701 EKALRLIEEMP--FKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISN 758
Query: 519 IYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDL--KYIVHNFKVSEKRHEGIEAVNMMM 576
YAV W+ V ++++MK + L PG S + + + VH F ++K H I + MM+
Sbjct: 759 AYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
+ F +I C+ A + + L FP+++ + +CG GR H
Sbjct: 137 NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVH 196
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
V+K+G + + V +SL MY CG VL D
Sbjct: 197 GYVVKSGLEDCVFVASSLADMYGKCG------VLDD------------------------ 226
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
A +FD +PD+N V WN ++ G+++ A++LF +M G++ T+ ++A
Sbjct: 227 -ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASA 285
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
++EG+ H I IL T+L++ YCK +E A VF+RM +++V+WN
Sbjct: 286 NMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNL 345
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVK 381
+I G+ G ED + + +++ ++K+K
Sbjct: 346 IISGYVQQGLVEDAIYMC-QLMRLEKLK 372
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 134/320 (41%), Gaps = 52/320 (16%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P T + + N G + G++ HA I NG +
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME------------------------- 306
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
D++L S+++ Y + G + A +FD M +K++VTWN++ISG+++ A+
Sbjct: 307 LDNILG------TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAI 360
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
+ + M LK + T+ +++A R+ LK G+ V IR S ++L + ++DMY
Sbjct: 361 YMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMY 420
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
KC + A +VF+ ++L+ WN ++ + G + L LF M +++
Sbjct: 421 AKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM----------QLE 470
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
P P+ +T+ I + F QM G+ PN M N
Sbjct: 471 GVP----------PNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMN 519
Query: 448 LLANAGLVDEAEKCLRNMAK 467
+ G +EA LR M +
Sbjct: 520 GMVQNGCSEEAILFLRKMQE 539
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 204/436 (46%), Gaps = 58/436 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKC 172
+ F N +I + +S + + R R P+ +T ++ +C + SG
Sbjct: 97 NIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLI 156
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H +K GF S L V ++L+ MY D G + AR
Sbjct: 157 HVLCLKLGFSSSLFVSSALVIMYVDMGKLLHAR--------------------------- 189
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
LFD MP ++ V + M G+++ L +FREMG G ++ MV ++ AC
Sbjct: 190 ----KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMAC 245
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
G+ LK G+SVHG IR S L L A+ DMY KC ++ A VF M+ R+++SW+
Sbjct: 246 GQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWS 305
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX 412
++ILG+ + G LFDEM+ G+ +P+ VTF+G+
Sbjct: 306 SLILGYGLDGDVVMSFKLFDEML-----------------KEGI---EPNAVTFLGVLSA 345
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
YF+ M + + + P H +A+ ++ AGL++EAEK L +M +
Sbjct: 346 CAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMP-----V 399
Query: 473 SRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTV 532
+ + +L+ C+ +V +GE+ A+ L+ + P+ + Y L +Y+ A +++ ++
Sbjct: 400 KPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESL 459
Query: 533 QKLMKERRLGIIPGSS 548
++ MKE+++ +PG S
Sbjct: 460 RQWMKEKQISKVPGCS 475
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 237 ALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG-LKGNATTMVCVVTACGRS 295
++F MP +N+ +WNI+I F ++ ++ LF M ++ + T+ ++ AC S
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 296 ARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
K G +H +++ SSL + +AL+ MY ++ A ++F+ M R+ V + AM
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 356 LGHCIHGSPEDGLSLFDEM 374
G+ G GL++F EM
Sbjct: 208 GGYVQQGEAMLGLAMFREM 226
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 198/446 (44%), Gaps = 60/446 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN +TF +CGN G++ Q K G S V NS+I M+
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF------------ 418
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
+++ + A F+ + +KNLV++N + G + N A
Sbjct: 419 -------------------VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
KL E+ L +A T +++ +++G +H ++++ + + ALI MY
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
KC ++ A+RVF M NRN++SW +MI G HG L F++M+
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI------------ 567
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
+ GV +P+EVT++ I G +F M + +KP H CM +
Sbjct: 568 -----EEGV---KPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVD 619
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
LL AGL+ +A + + M F D+ ++W L CR + LG+ A+ ++++ P
Sbjct: 620 LLCRAGLLTDAFEFINTMP-FQADV----LVWRTFLGACRVHSNTELGKLAARKILELDP 674
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSE---- 563
A Y L IYA A +WE + +++ MKER L G S +++ +H F V +
Sbjct: 675 NEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHP 734
Query: 564 KRHEGIEAVNMMMDELARRFRMPSVD 589
H+ + ++ ++ E+ R +P D
Sbjct: 735 NAHQIYDELDRLITEIKRCGYVPDTD 760
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 141/289 (48%), Gaps = 21/289 (7%)
Query: 109 FNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVS 168
F+ D+ N++IS Y KS D A+ F ++R + ++ ++ GN G +
Sbjct: 91 FDIEPDSVLYNSLISLYSKSGDSAKAEDV-FETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLA-----RDLASWNSMV 223
K + ++ G ++I ++ V V RV ++ D+ S++
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 224 DGYLEAGD-LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
D +++ + +A+ +FD M + N+VTW +MI+ ++ P A++ F +M G + +
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT--ALIDMYCKCR---RVELAT 337
T+ V +AC L G+ +H I RS L+ D +L+DMY KC V+
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAI----RSGLVDDVECSLVDMYAKCSADGSVDDCR 325
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGS-PEDGLSLFDEMVGMDKVKGEVE 385
+VF+RM + +++SW A+I G+ + + + ++LF EM+ +G VE
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI----TQGHVE 370
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 108/247 (43%), Gaps = 32/247 (12%)
Query: 131 PHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNS 190
P A F+ + F + +T + +C + G++ H+ I++G V V+ S
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECS 307
Query: 191 LIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTW 250
L+ MYA C G + +FD M D ++++W
Sbjct: 308 LVDMYAKCS----------------------------ADGSVDDCRKVFDRMEDHSVMSW 339
Query: 251 NIMISGFLKARN-PGYALKLFREMGSVG-LKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
+I+G++K N A+ LF EM + G ++ N T ACG + + G+ V G
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGL 368
+ S+ + ++I M+ K R+E A R FE ++ +NLVS+N + G C + + E
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 369 SLFDEMV 375
L E+
Sbjct: 460 KLLSEIT 466
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 199/460 (43%), Gaps = 56/460 (12%)
Query: 139 FRSLR-FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYAD 197
FR + F P+ YT + + G++ H IK G + L V +SL HMY
Sbjct: 79 FREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMR 138
Query: 198 CGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGF 257
G +Q ++ S MP +NLV WN +I G
Sbjct: 139 NGKLQDGEIVIRS-------------------------------MPVRNLVAWNTLIMGN 167
Query: 258 LKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSL 317
+ P L L++ M G + N T V V+++C A +G+ +H I++ + S +
Sbjct: 168 AQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVV 227
Query: 318 ILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGM 377
+ ++LI MY KC + A + F + + V W++MI + HG ++ + LF+ M
Sbjct: 228 AVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 287
Query: 378 DKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKP 437
++ +EV F+ + G F M + +G KP
Sbjct: 288 -------------------TNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328
Query: 438 NFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQ 497
H C+ +LL AG +D+AE +R+M + + ++W LL+ C ++ + ++
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAIIRSMP-----IKTDIVIWKTLLSACNIHKNAEMAQR 383
Query: 498 FAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVH 557
K ++ + P + ACY L ++A A +W +VS V+K M+++ + G S + K VH
Sbjct: 384 VFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVH 443
Query: 558 NFKVSEKRHEGIEAVNMMMDELARRFRMPSVDSGQSSVRH 597
FK+ ++ + + + EL ++ +SV H
Sbjct: 444 QFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLH 483
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 98/181 (54%)
Query: 194 MYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIM 253
MY+ GD A ++ M ++ S N +++GY+ AGDL +A +FD MPD+ L TWN M
Sbjct: 3 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 62
Query: 254 ISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS 313
I+G ++ L LFREM +G + T+ V + + G+ +HG I+
Sbjct: 63 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 314 RSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDE 373
L+++++L MY + +++ V M RNLV+WN +I+G+ +G PE L L+
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 182
Query: 374 M 374
M
Sbjct: 183 M 183
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 187/390 (47%), Gaps = 25/390 (6%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
S++ Y G ++ A F+ M + + + N+M+ G+ E G++S A +FD+M D++
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
TW MI + + AL LF +M G++ + +++ +++ C A L+ GR VH +
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGL 368
+R + + + L+ MY KC + A VF+R ++++++ WN++I G+ HG E+ L
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 369 SLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQ 428
+F EM P + P++VT I I G F+
Sbjct: 418 KIFHEM---------------PSSG-----TMPNKVTLIAILTACSYAGKLEEGLEIFES 457
Query: 429 MTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRF 488
M F + P H C ++L AG VD+A + + +M + ++ +W LL C+
Sbjct: 458 MESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT-----IKPDATVWGALLGACKT 512
Query: 489 RRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSS 548
+ L E AK L + P N Y L I A ++W +V+ V+K M+ + PG S
Sbjct: 513 HSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCS 572
Query: 549 LVDLKYIVHNFKVSEKRHEGIEAVNMMMDE 578
+++ VH F ++ +A+ +MM E
Sbjct: 573 WIEVGKKVHMFTRGGIKNHPEQAMILMMLE 602
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 149/355 (41%), Gaps = 63/355 (17%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
NS++ Y G + AR LFD M R++ SWN +V GY++ + A +F++MP++N+V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVH--- 305
+W M+ G+++ G A LF M + N + + R+ + R ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 306 ------------GSIIR--MFSRSSLILD----------TALIDMYCKCRRVELATRVFE 341
G + R + LI D T +I Y + RV++A ++FE
Sbjct: 168 PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 342 RMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV-------KGEVEIDESPCADR 394
M + VSW +M+LG+ + G ED F E++ M V G E+ E A R
Sbjct: 228 VMPEKTEVSWTSMLLGYTLSGRIEDAEEFF-EVMPMKPVIACNAMIVGFGEVGEISKARR 286
Query: 395 GVVRLQP-DEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAG 453
++ D T+ G+ F QM G++P+F L + ++ A
Sbjct: 287 VFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ-GVRPSFPSLISILSVCATLA 345
Query: 454 LVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPK 508
+ + ++ + C+F DVY+ A +L+ MY K
Sbjct: 346 SLQYGRQVHAHLVR------------------CQFDDDVYV----ASVLMTMYVK 378
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 34/214 (15%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ + + ++ C + GR+ HA +++ FD + V + L+ MY CG++ A+++
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD ++D+ WNS++ GY ++H L + AL
Sbjct: 389 FDRFSSKDIIMWNSIISGY-------ASHGLGE------------------------EAL 417
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD-TALIDM 326
K+F EM S G N T++ ++TAC + +L+EG + S+ F + + + +DM
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 327 YCKCRRVELATRVFERMTNR-NLVSWNAMILGHC 359
+ +V+ A + E MT + + W A+ LG C
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGAL-LGAC 510
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 202/439 (46%), Gaps = 56/439 (12%)
Query: 146 FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
F N+ T++ + N + + H+++++ GF++ + +LI+MY CG V A+
Sbjct: 233 FVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQ 292
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
+FD A+++ +++D Y + DK+
Sbjct: 293 RVFDDTHAQNIFLNTTIMDAYFQ---------------DKSFEE---------------- 321
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
AL LF +M + + N T ++ + + LK+G +HG +++ R+ +++ AL++
Sbjct: 322 ALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVN 381
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVE 385
MY K +E A + F MT R++V+WN MI G HG + L FD M+ GE+
Sbjct: 382 MYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI----FTGEI- 436
Query: 386 IDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCM 445
P+ +TFIG+ G YF Q+ F ++P+ H C+
Sbjct: 437 ---------------PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCI 481
Query: 446 ANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDM 505
LL+ AG+ +AE +R A + D+ + W LL C RR+ LG++ A+ ++
Sbjct: 482 VGLLSKAGMFKDAEDFMRT-APIEWDV----VAWRTLLNACYVRRNYRLGKKVAEYAIEK 536
Query: 506 YPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKR 565
YP + Y L I+A + +WE V+ V+ LM R + PG S + ++ H F + +
Sbjct: 537 YPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQ 596
Query: 566 HEGIEAVNMMMDELARRFR 584
H I + + E+ + +
Sbjct: 597 HPEITLIYAKVKEVMSKIK 615
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 7/172 (4%)
Query: 213 ARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY---ALKL 269
A D NS+++ Y++ + A LFD+MP++N+V+W M+ G+ +N G+ LKL
Sbjct: 66 AEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGY---QNSGFDFEVLKL 122
Query: 270 FREMGSVG-LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
F+ M G + N V +C S R++EG+ HG ++ S + L+ MY
Sbjct: 123 FKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYS 182
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
C A RV + + +L +++ + G+ G+ ++GL + + D V
Sbjct: 183 LCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV 234
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
+ F T++ AY + A + + PN YTF L+ S + G H
Sbjct: 302 NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLH 361
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
V+K+G+ + + V N+L++MYA G ++ AR F M RD+ +WN+M+ G G
Sbjct: 362 GLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGR 421
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKA 260
A FD M + I G L+A
Sbjct: 422 EALEAFDRMIFTGEIPNRITFIGVLQA 448
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 195/433 (45%), Gaps = 60/433 (13%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLR-FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
NT++ Y K H+ + FR ++ +S + +I SC + G ++ G+ H V+
Sbjct: 402 NTMLKGYGK-MKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV 460
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
K D + V NSLI +Y + GDL+ A
Sbjct: 461 KTSLDLTISVVNSLIDLYG-------------------------------KMGDLTVAWR 489
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSAR 297
+F D N++TWN MI+ ++ A+ LF M S K ++ T+V ++ AC +
Sbjct: 490 MF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGS 548
Query: 298 LKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILG 357
L+ G+ +H I +L L ALIDMY KC +E + +F+ ++ V WN MI G
Sbjct: 549 LERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISG 608
Query: 358 HCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXX 417
+ +HG E ++LFD+M D ++P TF+ +
Sbjct: 609 YGMHGDVESAIALFDQMEESD--------------------VKPTGPTFLALLSACTHAG 648
Query: 418 XXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESM 477
G+ F +M + +KPN H C+ +LL+ +G ++EAE + +M S + +
Sbjct: 649 LVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP-----FSPDGV 702
Query: 478 LWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMK 537
+W LL+ C + +G + A+ V P+N Y L +Y+ A +WE +++M+
Sbjct: 703 IWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMR 762
Query: 538 ERRLGIIPGSSLV 550
E +G G S+V
Sbjct: 763 ESGVGKRAGHSVV 775
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 36/295 (12%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
F+A L+S ++ + + +F D F N++I A+ + D + F+F L
Sbjct: 60 FVASKLISSYASYGKPNLSSRVFHLVTRR-DIFLWNSIIKAHFSNGDYARSLCFFFSMLL 118
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNG-FDSVLPVQNSLIHMYADCGDVQ 202
P+ +T ++ +C G H V+K+G FD V S ++ Y+ CG +Q
Sbjct: 119 SGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQ 178
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
A ++F D MPD+++V W +ISG ++
Sbjct: 179 DACLVF-------------------------------DEMPDRDVVAWTAIISGHVQNGE 207
Query: 263 PGYALKLFREMGSVGL---KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
L +M S G K N T+ C AC LKEGR +HG ++ SS +
Sbjct: 208 SEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFV 267
Query: 320 DTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+++ Y K A F + + ++ SW ++I G E+ +F EM
Sbjct: 268 QSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN T +C N G + GR H +KNG S VQ+S+ Y+ G+ A +
Sbjct: 228 PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS 287
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F + D+ SW S++ +GD+ + FD
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEES---FD--------------------------- 317
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDM 326
+F EM + G+ + + C++ G+ + +G++ HG +IR FS S + ++ L+ M
Sbjct: 318 -MFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNS-LLSM 375
Query: 327 YCKCRRVELATRVFERMTNR-NLVSWNAMILGH 358
YCK + +A ++F R++ N +WN M+ G+
Sbjct: 376 YCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 34/217 (15%)
Query: 160 CGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASW 219
C + + S RK +A +I G + V + LI YA G ++ +F + RD+ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
NS++ + GD + + F S L ++P +
Sbjct: 94 NSIIKAHFSNGDYARSLCFF--------------FSMLLSGQSPDH-------------- 125
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRM--FSRSSLILDTALIDMYCKCRRVELAT 337
T VV+AC G VHG +++ F R++ + + + Y KC ++ A
Sbjct: 126 ---FTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV-GASFVYFYSKCGFLQDAC 181
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
VF+ M +R++V+W A+I GH +G E GL +M
Sbjct: 182 LVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 198/446 (44%), Gaps = 63/446 (14%)
Query: 151 YTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDS 210
Y + + + + +G++ HA VIK GF S LPV NS++ +Y C
Sbjct: 214 YCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRC------------ 261
Query: 211 MLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLF 270
G LS A F M DK+L+TWN +IS L+ + AL +F
Sbjct: 262 -------------------GYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMF 301
Query: 271 REMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKC 330
+ S G N T +V AC A L G+ +HG I R ++ L ALIDMY KC
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKC 361
Query: 331 RRVELATRVF-ERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDES 389
+ + RVF E + RNLVSW +M++G+ HG + + LFD+MV
Sbjct: 362 GNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG----------- 410
Query: 390 PCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLL 449
++PD + F+ + G YF M +G+ P+ C+ +LL
Sbjct: 411 ---------IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLL 461
Query: 450 ANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCR-FRRDVYLGEQFAKLLVDMYPK 508
AG + EA + + M F D S W +L C+ + + + A+ ++++ PK
Sbjct: 462 GRAGKIGEAYELVERMP-FKPDEST----WGAILGACKAHKHNGLISRLAARKVMELKPK 516
Query: 509 NLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEG 568
+ Y L IYA +W + + V+K+M+ G S + ++ V +F VS+K
Sbjct: 517 MVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPN 576
Query: 569 IEAV----NMMMDELARRFRMPSVDS 590
+V ++++E +P +DS
Sbjct: 577 ASSVYSVLGLLIEETREAGYVPELDS 602
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 221 SMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
+++ Y E G + A +LFD MPD+++V W MI+G+ + A + F EM G
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR-RVELATRV 339
N T+ V+ +C L G VHG ++++ SL +D A+++MY C +E A +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
F + +N V+W +I G G GL ++ +M+
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQML 205
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D NT+IS +S D A + + R F PN YTF L+ +C N + G++ H
Sbjct: 278 DLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 336
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSML-ARDLASWNSMVDGYLEAGDL 232
++ + GF+ + + N+LI MYA CG++ ++ +F ++ R+L SW SM+ GY G
Sbjct: 337 GRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKA-RNPGY---ALKLFREMGS-VGLKGNATTMVC 287
+ A LFD M + I+ L A R+ G LK F M S G+ + C
Sbjct: 397 AEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNC 456
Query: 288 VVTACGRSARLKEG 301
VV GR+ ++ E
Sbjct: 457 VVDLLGRAGKIGEA 470
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 38/246 (15%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D +I+ Y S+ A + ++ PN +T ++ SC N + G H
Sbjct: 75 DVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVH 134
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCG-DVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
V+K G + L V N++++MYA C ++ A ++F + ++ +W +++ G+ GD
Sbjct: 135 GVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGD- 193
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
I G LK++++M L+ T C+ A
Sbjct: 194 --------------------GIGG----------LKMYKQM---LLENAEVTPYCITIAV 220
Query: 293 GRSARLKE---GRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLV 349
SA + G+ +H S+I+ +S+L + +++D+YC+C + A F M +++L+
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Query: 350 SWNAMI 355
+WN +I
Sbjct: 281 TWNTLI 286
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 183/384 (47%), Gaps = 33/384 (8%)
Query: 170 RKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEA 229
R HA++IK + + +L+ Y G ++ AR +F++M ++ SM+ GY+
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQ 219
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKA-RNPGYALKLFREMGSVGLKGNATTMVCV 288
G + A +F+ K++V +N M+ GF ++ ++ ++ M G N +T V
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 289 VTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL 348
+ AC + G+ VH I++ + + + ++L+DMY KC + A RVF++M +N+
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 349 VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIG 408
SW +MI G+ +G+PE+ L LF M R++P+ VTF+G
Sbjct: 340 FSWTSMIDGYGKNGNPEEALELFTRMKEF--------------------RIEPNYVTFLG 379
Query: 409 IXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKF 468
G F+ M + +KP H C+ +L+ AG +++A + R M +
Sbjct: 380 ALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPE- 438
Query: 469 DGDMSRESMLWANLLALCRFRRDVYL----GEQFAKLLVDMYPKNLACYQFLLIIYAVAA 524
+S +WA LL+ C +V L + KL D P Y L +YA
Sbjct: 439 ----RPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRP---GAYLALSNVYASND 491
Query: 525 QWENVSTVQKLMKERRLGIIPGSS 548
+W+NVS ++++MK RR+ G S
Sbjct: 492 KWDNVSKIREVMKRRRISKTIGRS 515
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 34/255 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQV-FYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D N ++ + +S + V Y R F PN TF +IG+C G++
Sbjct: 236 DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQV 295
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
HAQ++K+G + + + +SL+ MYA CG + AR +FD M +++ SW SM+DGY + G
Sbjct: 296 HAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNG-- 353
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
NP AL+LF M ++ N T + ++AC
Sbjct: 354 -----------------------------NPEEALELFTRMKEFRIEPNYVTFLGALSAC 384
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTA-LIDMYCKCRRVELATRVFERMTNRNLVSW 351
S + +G + S+ R +S + A ++D+ + + A M R
Sbjct: 385 SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDI 444
Query: 352 NAMILGHC-IHGSPE 365
A +L C +HG+ E
Sbjct: 445 WAALLSSCNLHGNVE 459
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 107/255 (41%), Gaps = 43/255 (16%)
Query: 135 QVFYFRSLRFRFFP-NSYTFVPLIGSCG----------------NTGCIVSGRKCHAQVI 177
++F F S+ R P N Y+ PL + N+ +G+K HA +I
Sbjct: 2 RIFRFTSISPRILPSNHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADII 61
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
K GF L + L+ ++ CG + AR +FD + L+++N M+ GYL+ G +
Sbjct: 62 KTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLL 121
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSAR 297
L M +S LKA N +TM+ + C
Sbjct: 122 LVQRMSYSGEKADGYTLSMVLKASN-----------------SRGSTMILPRSLC----- 159
Query: 298 LKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILG 357
R VH II+ +L TAL+D Y K ++E A VFE M + N+V +MI G
Sbjct: 160 ----RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISG 215
Query: 358 HCIHGSPEDGLSLFD 372
+ G ED +F+
Sbjct: 216 YMNQGFVEDAEEIFN 230
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 208/461 (45%), Gaps = 56/461 (12%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N++I AY ++ +P A + + + L P + + + +C + G + GR H ++
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
G D R+++ NS++ Y + ++ +A ++
Sbjct: 366 LGLD-------------------------------RNVSVVNSLISMYCKCKEVDTAASM 394
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
F + + LV+WN MI GF + P AL F +M S +K + T V V+TA +
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 454
Query: 299 KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGH 358
+ +HG ++R ++ + TAL+DMY KC + +A +F+ M+ R++ +WNAMI G+
Sbjct: 455 HHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 514
Query: 359 CIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXX 418
HG + L LF+EM +G ++ P+ VTF+ +
Sbjct: 515 GTHGFGKAALELFEEM------------------QKGTIK--PNGVTFLSVISACSHSGL 554
Query: 419 XXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESML 478
G F M + + ++ + H M +LL AG ++EA + M + +
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP-----VKPAVNV 609
Query: 479 WANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKE 538
+ +L C+ ++V E+ A+ L ++ P + + L IY A+ WE V V+ M
Sbjct: 610 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 669
Query: 539 RRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDEL 579
+ L PG S+V++K VH+F H + + +++L
Sbjct: 670 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 151/352 (42%), Gaps = 34/352 (9%)
Query: 46 PPFTRHHFQTLLQSSCQTPRHXXXXXXXXXXXXXXRIPFLARTLLSRASNLCGVDFTLLI 105
P H LL C + + + F L+S VD +
Sbjct: 32 PANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARV 91
Query: 106 FRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGC 165
F ++ L+ +T++ + K D A F+ R P Y F L+ CG+
Sbjct: 92 FEPIDSKLNVL-YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAE 150
Query: 166 IVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDG 225
+ G++ H ++K+GF L L +MYA C V AR
Sbjct: 151 LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR-------------------- 190
Query: 226 YLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
+FD MP+++LV+WN +++G+ + AL++ + M LK + T+
Sbjct: 191 -----------KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
V V+ A + G+ +HG +R S + + TAL+DMY KC +E A ++F+ M
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEMV--GMDKVKGEVEIDESPCADRG 395
RN+VSWN+MI + + +P++ + +F +M+ G+ V CAD G
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 202/467 (43%), Gaps = 69/467 (14%)
Query: 83 PFLARTLLSRASNL------CG-VDFTLLIF-RYFNNPLDTFCVNTVISAYCKSHDPHLA 134
P+L R L +S L CG + +F R F N++IS Y + A
Sbjct: 120 PYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDA 179
Query: 135 QVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHM 194
YF+ P+ +TF ++ +CG G + G H ++K GF + V N+L+ M
Sbjct: 180 MALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVM 239
Query: 195 YADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMI 254
YA CG D+ A +FD++P K+ V+WN M+
Sbjct: 240 YAKCG-------------------------------DIVKARNVFDMIPHKDYVSWNSML 268
Query: 255 SGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSR 314
+G+L AL +FR M G++ + V + + R K GR +HG +IR
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDK---VAISSVLARVLSFKHGRQLHGWVIRRGME 325
Query: 315 SSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
L + ALI +Y K ++ A +F++M R+ VSWNA+I H +GL F++M
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQM 382
Query: 375 VGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFG 434
+ +PD +TF+ + G F M+ +G
Sbjct: 383 HRANA--------------------KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYG 422
Query: 435 LKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYL 494
+ P H CM NL AG+++EA +M + + +W LL C + +
Sbjct: 423 IDPKMEHYACMVNLYGRAGMMEEA----YSMIVQEMGLEAGPTVWGALLYACYLHGNTDI 478
Query: 495 GEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRL 541
GE A+ L ++ P N ++ L+ IY+ A + E+V V+++M +R L
Sbjct: 479 GEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 153 FVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSML 212
F L+ +C + I G + H + + L + + L+ +YA CG +VA +FD M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 213 ARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFRE 272
RD + + WN +ISG+ + A+ L+ +
Sbjct: 155 KRDSSPF-----------------------------AWNSLISGYAELGQYEDAMALYFQ 185
Query: 273 MGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRR 332
M G+K + T V+ ACG ++ G ++H +++ + + AL+ MY KC
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 333 VELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+ A VF+ + +++ VSWN+M+ G+ HG + L +F MV
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 217/475 (45%), Gaps = 60/475 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRF-RFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D N++I AY + P L + F+ +R R P+ T + L G I + R
Sbjct: 312 DLISWNSIIKAYELNEQP-LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370
Query: 173 HAQVIKNG-FDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
++ G F + + N+++ MYA G +VD
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLG----------------------LVD------- 401
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG-LKGNATTMVCVVT 290
SA A+F+ +P+ ++++WN +ISG+ + A++++ M G + N T V V+
Sbjct: 402 --SARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 459
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
AC ++ L++G +HG +++ + + T+L DMY KC R+E A +F ++ N V
Sbjct: 460 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP 519
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIX 410
WN +I H HG E + LF EM+ D GV +PD +TF+ +
Sbjct: 520 WNTLIACHGFHGHGEKAVMLFKEML-----------------DEGV---KPDHITFVTLL 559
Query: 411 XXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDG 470
G+ F+ M +G+ P+ H CM ++ AG ++ A K +++M+
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS---- 615
Query: 471 DMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVS 530
+ ++ +W LL+ CR +V LG+ ++ L ++ P+++ + L +YA A +WE V
Sbjct: 616 -LQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVD 674
Query: 531 TVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRM 585
++ + + L PG S +++ V F + H E + + L + +M
Sbjct: 675 EIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKM 729
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 61/298 (20%)
Query: 114 DTFCVNTVISAYCKS-HDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D + N +IS Y ++ + + + F L P+ TF ++ +C ++ G K
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKI 172
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H +K GF + V SLIH+Y+ V AR+LFD
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE---------------------- 210
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG-NATTMVCVVTA 291
MP +++ +WN MISG+ ++ N AL L S GL+ ++ T+V +++A
Sbjct: 211 ---------MPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSA 256
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
C + G ++H I+ S L + LID+Y + R+ +VF+RM R+L+SW
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 352 NAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGI 409
N++I + ++ P +SLF EM + R+QPD +T I +
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEM--------------------RLSRIQPDCLTLISL 354
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 47/288 (16%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N +IS YC+S + A LR +S T V L+ +C G G H+ IK
Sbjct: 220 NAMISGYCQSGNAKEALTLS-NGLRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
+G +S L V N LI +YA E G L +
Sbjct: 276 HGLESELFVSNKLIDLYA-------------------------------EFGRLRDCQKV 304
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
FD M ++L++WN +I + P A+ LF+EM ++ + T++ + + + +
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364
Query: 299 KEGRSVHGSIIRM-FSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILG 357
+ RSV G +R + + + A++ MY K V+ A VF + N +++SWN +I G
Sbjct: 365 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISG 424
Query: 358 HCIHGSPEDGLSLFDEMVGMDKVKGEVEIDES-------PCADRGVVR 398
+ +G + + +++ M + +GE+ ++ C+ G +R
Sbjct: 425 YAQNGFASEAIEMYNIM----EEEGEIAANQGTWVSVLPACSQAGALR 468
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 100/192 (52%), Gaps = 8/192 (4%)
Query: 194 MYADCGDVQVARVLFDSMLA----RDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVT 249
++ C ++Q A+ L ++ +++ +V+ Y G+++ A FD + ++++
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 250 WNIMISGFLKARNPGYALKLFRE-MGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
WN+MISG+ +A N ++ F M S GL + T V+ AC + +G +H
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLA 176
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGL 368
++ + + +LI +Y + + V A +F+ M R++ SWNAMI G+C G+ ++ L
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 369 SLFDEMVGMDKV 380
+L + + MD V
Sbjct: 237 TLSNGLRAMDSV 248
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 35/272 (12%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLA-QVFYFRSLRFRFFPNSYTFVPLI 157
VD +F + N D NT+IS Y ++ A +++ N T+V ++
Sbjct: 400 VDSARAVFNWLPNT-DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 158 GSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA 217
+C G + G K H +++KNG + V SL MY CG
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG------------------ 500
Query: 218 SWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG 277
L A +LF +P N V WN +I+ + A+ LF+EM G
Sbjct: 501 -------------RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRS-SLILDTALIDMYCKCRRVELA 336
+K + T V +++AC S + EG+ + + + SL ++DMY + ++E A
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607
Query: 337 TRVFERMTNRNLVS-WNAMILGHCIHGSPEDG 367
+ + M+ + S W A++ +HG+ + G
Sbjct: 608 LKFIKSMSLQPDASIWGALLSACRVHGNVDLG 639
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 222/490 (45%), Gaps = 59/490 (12%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+F D N++I+ + K A + + R + YT+ L+ +C
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEE 319
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYAD--CGDVQVARVLFDSMLARDLASWNSM 222
+ G+ H VIK G + V N+LI MY G ++ A LF+S+ ++DL SWNS+
Sbjct: 320 HQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSI 379
Query: 223 VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
+ G+ + G LS A+K F + S +K +
Sbjct: 380 ITGFAQKG-LSED------------------------------AVKFFSYLRSSEIKVDD 408
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
++ +C A L+ G+ +H + S+ + ++LI MY KC +E A + F++
Sbjct: 409 YAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQ 468
Query: 343 MTNR-NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQP 401
++++ + V+WNAMILG+ HG + L LF +M + V+L
Sbjct: 469 ISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQN------------------VKL-- 508
Query: 402 DEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKC 461
D VTF I G M V+ ++P H +LL AGLV++A++
Sbjct: 509 DHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKEL 568
Query: 462 LRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYA 521
+ +M ++ + M+ L +CR ++ + Q A L+++ P++ Y L +Y+
Sbjct: 569 IESMP-----LNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYS 623
Query: 522 VAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELAR 581
+WE ++V+K+MKER + +PG S ++++ V F ++ + + + MM+ +L +
Sbjct: 624 DLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQ 683
Query: 582 RFRMPSVDSG 591
+ D+G
Sbjct: 684 EMQWLDSDNG 693
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 13/169 (7%)
Query: 190 SLIHMYA-DCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
SL H YA CG + D+ N ++D Y++ G L A+ LFD MP ++ V
Sbjct: 20 SLTHCYAIKCGSIS------------DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSV 67
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
+WN MISG+ A LF M G + + ++ R G VHG +
Sbjct: 68 SWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLV 127
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILG 357
I+ ++ + ++L+DMY KC RVE A F+ ++ N VSWNA+I G
Sbjct: 128 IKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 176
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 132/305 (43%), Gaps = 48/305 (15%)
Query: 106 FRYFNNPLDTFCVNTVISAYCKSHDPHLA-QVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
F+ + P ++ N +I+ + + D A + ++ ++ TF PL+ +
Sbjct: 159 FKEISEP-NSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPM 217
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
++ HA+V+K G + + N++I YADC
Sbjct: 218 FCNLLKQVHAKVLKLGLQHEITICNAMISSYADC-------------------------- 251
Query: 225 GYLEAGDLSSAHALFDVMP-DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
G +S A +FD + K+L++WN MI+GF K A +LF +M ++ +
Sbjct: 252 -----GSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY 306
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCK--CRRVELATRVFE 341
T +++AC G+S+HG +I+ ALI MY + +E A +FE
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE 366
Query: 342 RMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE-------SPCADR 394
+ +++L+SWN++I G G ED + F + E+++D+ C+D
Sbjct: 367 SLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS-----SEIKVDDYAFSALLRSCSDL 421
Query: 395 GVVRL 399
++L
Sbjct: 422 ATLQL 426
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 107/263 (40%), Gaps = 33/263 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D+ NT+IS Y A + R + Y+F L+ + G + H
Sbjct: 65 DSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVH 124
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
VIK G++ + V +SL+ MYA C V+
Sbjct: 125 GLVIKGGYECNVYVGSSLVDMYAKCERVE------------------------------- 153
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMG-SVGLKGNATTMVCVVTAC 292
A F + + N V+WN +I+GF++ R+ A L M + +A T ++T
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM-TNRNLVSW 351
+ VH ++++ + + + A+I Y C V A RVF+ + +++L+SW
Sbjct: 214 DDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISW 273
Query: 352 NAMILGHCIHGSPEDGLSLFDEM 374
N+MI G H E LF +M
Sbjct: 274 NSMIAGFSKHELKESAFELFIQM 296
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 205/475 (43%), Gaps = 62/475 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSL----RFRFFPNSYTFVPLIGSCGNTGCIVSG 169
D N++IS Y S +L + F S F PN TF+ +I +C G G
Sbjct: 96 DLVSWNSLISGY--SGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 170 RKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEA 229
R H V+K G + V N+ I+ Y +
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYG-------------------------------KT 182
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
GDL+S+ LF+ + KNLV+WN MI L+ L F VG + + T + V+
Sbjct: 183 GDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVL 242
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLV 349
+C ++ + +HG I+ + + TAL+D+Y K R+E ++ VF +T+ + +
Sbjct: 243 RSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSM 302
Query: 350 SWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGI 409
+W AM+ + HG D + F+ MV + PD VTF +
Sbjct: 303 AWTAMLAAYATHGFGRDAIKHFELMVHYG--------------------ISPDHVTFTHL 342
Query: 410 XXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFD 469
G+ YF+ M+ + + P H CM +LL +GL+ +A ++ M
Sbjct: 343 LNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP--- 399
Query: 470 GDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENV 529
M S +W LL CR +D LG + A+ L ++ P++ Y L IY+ + W++
Sbjct: 400 --MEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDA 457
Query: 530 STVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
S ++ LMK++ L G S ++ +H F V + H E + + E+ ++ +
Sbjct: 458 SRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 512
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 189/405 (46%), Gaps = 56/405 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+S + +C + G + H +IK G + V +SLI +Y+ CG ++A +
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F SM +N+V WN MIS + + P ++
Sbjct: 534 FTSM-------------------------------STENMVAWNSMISCYSRNNLPELSI 562
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
LF M S G+ ++ ++ V+ A +A L +G+S+HG +R+ S L ALIDMY
Sbjct: 563 DLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMY 622
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
KC + A +F++M +++L++WN MI G+ HG LSLFDEM K GE
Sbjct: 623 VKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM----KKAGE---- 674
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
PD+VTF+ + G++ F+ M +G++PN H M +
Sbjct: 675 ------------SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVD 722
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
LL AGL++EA ++ M + +S +W LL+ R +V LG A+ L+ M P
Sbjct: 723 LLGRAGLLEEAYSFIKAMP-----IEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEP 777
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDL 552
+ + Y L+ +Y A + + LMKE+ L PG S +++
Sbjct: 778 ERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEV 822
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 146 FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
F+ + +TF L+ +C + G+ H V+ G+ + SL++MY CG + A
Sbjct: 56 FWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAV 115
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
+FD W+ G + +++ WN MI G+ K R
Sbjct: 116 QVFDG--------WSQSQSG----------------VSARDVTVWNSMIDGYFKFRRFKE 151
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSA--RLKEGRSVHGSIIRMFSRSSLILDTAL 323
+ FR M G++ +A ++ VV+ + R +EG+ +HG ++R + L TAL
Sbjct: 152 GVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTAL 211
Query: 324 IDMYCKCRRVELATRVFERMTNR-NLVSWNAMILGHCIHGSPEDGLSLF 371
IDMY K A RVF + ++ N+V WN MI+G G E L L+
Sbjct: 212 IDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 150 SYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFD 209
S +F +G+C + GR+ H V+K G + V SL+ MY+ CG V
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV-------- 323
Query: 210 SMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKL 269
A +F + DK L WN M++ + + AL L
Sbjct: 324 -----------------------GEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 270 FREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCK 329
F M + ++ T+ V++ C G+SVH + + +S+ +++AL+ +Y K
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 330 CRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
C A VF+ M +++V+W ++I G C +G ++ L +F +M
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDM 465
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N++IS Y +++ P L+ + L FP+S + ++ + +T ++ G+ H ++
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
G S ++N+LI MY CG + A +F M + L +WN M+ GY GD +A +L
Sbjct: 606 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSL 665
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL 298
FD EM G + T + +++AC S +
Sbjct: 666 FD-------------------------------EMKKAGESPDDVTFLSLISACNHSGFV 694
Query: 299 KEGRSV 304
+EG+++
Sbjct: 695 EEGKNI 700
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 38/300 (12%)
Query: 83 PFLARTLLSRASNLCGVDFTLLIFRYFN------NPLDTFCVNTVISAYCKSHDPHLAQV 136
PF+A +L++ +D+ + +F ++ + D N++I Y K
Sbjct: 95 PFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVG 154
Query: 137 FYFRSLRFRFFPNSYTFVPLIGSCGNTGCI--VSGRKCHAQVIKNGFDSVLPVQNSLIHM 194
+ R L F P++++ ++ G G++ H +++N D+ ++ +LI M
Sbjct: 155 CFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDM 214
Query: 195 YADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMI 254
Y G L+ D +W V+ + N+V WN+MI
Sbjct: 215 YFKFG------------LSID--AWRVFVE----------------IEDKSNVVLWNVMI 244
Query: 255 SGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSR 314
GF + +L L+ + +K +T+ + AC +S GR +H +++M
Sbjct: 245 VGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 315 SSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ + T+L+ MY KC V A VF + ++ L WNAM+ + + L LF M
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 266 ALKLF-REMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
AL L+ + GS + T ++ AC L G+++HGS++ + R + T+L+
Sbjct: 43 ALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLV 102
Query: 325 DMYCKCRRVELATRVFE-------RMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+MY KC ++ A +VF+ ++ R++ WN+MI G+ ++G+ F M+
Sbjct: 103 NMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRML 160
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 214/474 (45%), Gaps = 61/474 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSY-TFVPLIGSCGNTGCIVS-GRK 171
D N +I Y + DP A + F+++R ++Y T V ++ +C G ++ G+
Sbjct: 410 DVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 468
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
HA ++ GF+S V+NSLI MYA CG D
Sbjct: 469 LHAYIVSAGFESDEHVKNSLITMYAKCG-------------------------------D 497
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
LSS+ LF+ + ++N++TWN M++ + LKL +M S G+ + + ++A
Sbjct: 498 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 557
Query: 292 CGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
+ A L+EG+ +HG +++ F S I + A DMY KC + ++ NR+L S
Sbjct: 558 AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA-ADMYSKCGEIGEVVKMLPPSVNRSLPS 616
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIX 410
WN +I HG E+ + F EM+ M ++P VTF+ +
Sbjct: 617 WNILISALGRHGYFEEVCATFHEMLEMG--------------------IKPGHVTFVSLL 656
Query: 411 XXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDG 470
G +Y+ + FGL+P H C+ +LL +G + EAE + M
Sbjct: 657 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMP---- 712
Query: 471 DMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVS 530
M ++W +LLA C+ ++ G + A+ L + P++ + Y ++A +WE+V
Sbjct: 713 -MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVE 771
Query: 531 TVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
V+K M + + S V LK V +F + ++ H + ++++ + +
Sbjct: 772 NVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 825
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 131/289 (45%), Gaps = 36/289 (12%)
Query: 88 TLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF 147
+L+S ++ VD+ IF + DT N++ +AY + + H+ + F SL RF
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQ--NGHIEESFRIFSLMRRFH 239
Query: 148 P--NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
NS T L+ G+ GR H V+K GFDSV+ V N+L+ MYA G A
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
++F M +DL SWNS++ ++ G ++L
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDG--------------RSL-----------------D 328
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
AL L M S G N T + AC ++GR +HG ++ + I+ AL+
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 388
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
MY K + + RV +M R++V+WNA+I G+ P+ L+ F M
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 437
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 32/228 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIV-SGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV 206
P+S+ L+ +CG +G + G + H V K+G S + V +++H+Y G V +R
Sbjct: 39 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 98
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
+F+ M PD+N+V+W ++ G+ P
Sbjct: 99 VFEEM-------------------------------PDRNVVSWTSLMVGYSDKGEPEEV 127
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
+ +++ M G+ N +M V+++CG GR + G +++ S L ++ +LI M
Sbjct: 128 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 187
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
V+ A +F++M+ R+ +SWN++ + +G E+ +F M
Sbjct: 188 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 242 MPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARL-KE 300
MP +N V+WN M+SG ++ ++ FR+M +G+K ++ + +VTACGRS + +E
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 301 GRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCI 360
G VHG + + S + + TA++ +Y V + +VFE M +RN+VSW ++++G+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 361 HGSPEDGLSLFDEMVG 376
G PE+ + ++ M G
Sbjct: 121 KGEPEEVIDIYKGMRG 136
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
N + +I SCG GR+ QV+K+G +S L V+NSLI M G+V A
Sbjct: 142 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA---- 197
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
+ +FD M +++ ++WN + + + + + + +
Sbjct: 198 ---------------------------NYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
+F M + N+TT+ +++ G K GR +HG +++M S + + L+ MY
Sbjct: 231 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 290
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDK 379
R A VF++M ++L+SWN+++ G D L L M+ K
Sbjct: 291 GAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 341
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 213/465 (45%), Gaps = 71/465 (15%)
Query: 111 NPLDTFCV---------NTVISAYCKSHDPHLAQVFYFRSLRFRFFP---NSYTFVPLIG 158
N D+F + N + Y +S +P + + FR RFR P +S++ + I
Sbjct: 15 NKFDSFLLHFHTKSLKSNHTLKQYLESGEP-IKALLDFRH-RFRQSPSFVDSFSVLFAIK 72
Query: 159 -SCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA 217
S + GR+ HA V K GF++V+ +Q SL+ Y+ GDV
Sbjct: 73 VSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDY-------------- 118
Query: 218 SWNSMVDGYLEAGDLSSAHALFDVMPDK-NLVTWNIMISGFLKARNPGYALKLFREMGSV 276
A +FD P+K N+V W MIS + + N A++LF+ M +
Sbjct: 119 -----------------ARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAE 161
Query: 277 GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSS--LILDTALIDMYCKCRRVE 334
++ + + ++AC ++ G ++ I+ R + L L +L++MY K E
Sbjct: 162 KIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETE 221
Query: 335 LATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADR 394
A ++F+ +++ ++ +MI G+ ++G ++ L LF +M +D+ + V
Sbjct: 222 KARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTV---------- 271
Query: 395 GVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGL 454
+ P++VTFIG+ G+ +FK M + LKP AH CM +L +G
Sbjct: 272 ----ITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGH 327
Query: 455 VDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQ 514
+ +A + + M + +++W LL C +V LGE+ + + ++ ++ Y
Sbjct: 328 LKDAHEFINQMP-----IKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYV 382
Query: 515 FLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNF 559
L IYA W+ S ++ +++RR+ PG S ++L I++ F
Sbjct: 383 ALSNIYASKGMWDEKSKMRDRVRKRRM---PGKSWIELGSIINEF 424
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 124/305 (40%), Gaps = 47/305 (15%)
Query: 88 TLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF 147
+L+ S++ VD+ +F + +ISAY ++ + A + R +
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNG--FDSVLPVQNSLIHMYADCGDVQVAR 205
+ + +C + G + G + +++ IK L ++NSL++MY G+ + AR
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
LFD + +D+ ++ SM+ GY G + LF M
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM----------------------- 261
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTAL-- 323
K + + N T + V+ AC S ++EG+ R F S+I+D L
Sbjct: 262 --KTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK-------RHF--KSMIMDYNLKP 310
Query: 324 --------IDMYCKCRRVELATRVFERMTNR-NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+D++C+ ++ A +M + N V W ++ +HG+ E G + +
Sbjct: 311 REAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRI 370
Query: 375 VGMDK 379
+D+
Sbjct: 371 FELDR 375
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 200/476 (42%), Gaps = 58/476 (12%)
Query: 106 FRYFNN--PLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNT 163
F+ FN D + +I+ +C++ + A + R PN +T ++ C
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV 223
C G + H V+K GFD + V N+LI
Sbjct: 362 KCSGLGEQLHGLVVKVGFDLDIYVSNALI------------------------------- 390
Query: 224 DGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
D Y + + +A LF + KN V+WN +I G+ G A +FRE +
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
T + AC A + G VHG I+ + + + +LIDMY KC ++ A VF M
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 344 TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDE 403
++ SWNA+I G+ HG L + D M D +P+
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRILDIMKDRD--------------------CKPNG 550
Query: 404 VTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLR 463
+TF+G+ G+ F+ M G++P H CM LL +G +D+A K +
Sbjct: 551 LTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIE 610
Query: 464 NMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVA 523
+ M+W +L+ + + + A+ ++ + PK+ A Y + +YA A
Sbjct: 611 GIP-----YEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGA 665
Query: 524 AQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDEL 579
QW NV++++K MKE + PG S ++ + VH F V H ++ +N M++ L
Sbjct: 666 KQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWL 721
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 31/228 (13%)
Query: 146 FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
F PN+YTF + + G + H Q++K + V L+ +Y
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYT--------- 293
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
+ GD+S A +F+ MP ++V W+ MI+ F +
Sbjct: 294 ----------------------QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNE 331
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
A+ LF M + N T+ ++ C G +HG ++++ + + ALID
Sbjct: 332 AVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALID 391
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDE 373
+Y KC +++ A ++F ++++N VSWN +I+G+ G S+F E
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 31/202 (15%)
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H+ ++K G+DS V +LI+ Y+ CG V AR +F+ +L +D+ W +V Y+E G
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
+ L M + N LKA S+GL
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKA--------------SIGL-------------- 260
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
+ VHG I++ + L+ +Y + + A +VF M ++V W+
Sbjct: 261 ---GAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWS 317
Query: 353 AMILGHCIHGSPEDGLSLFDEM 374
MI C +G + + LF M
Sbjct: 318 FMIARFCQNGFCNEAVDLFIRM 339
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Query: 215 DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMG 274
DL + N +++ Y++AG A LFD MP++N V++ + G+ G +L RE
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHRE-- 140
Query: 275 SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVE 334
G + N + + + +H I+++ S+ + ALI+ Y C V+
Sbjct: 141 --GHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 335 LATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
A VFE + +++V W ++ + +G ED L L M
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 214/474 (45%), Gaps = 61/474 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSY-TFVPLIGSCGNTGCIVS-GRK 171
D N +I Y + DP A + F+++R ++Y T V ++ +C G ++ G+
Sbjct: 427 DVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 485
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
HA ++ GF+S V+NSLI MYA CG D
Sbjct: 486 LHAYIVSAGFESDEHVKNSLITMYAKCG-------------------------------D 514
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
LSS+ LF+ + ++N++TWN M++ + LKL +M S G+ + + ++A
Sbjct: 515 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 574
Query: 292 CGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
+ A L+EG+ +HG +++ F S I + A DMY KC + ++ NR+L S
Sbjct: 575 AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA-ADMYSKCGEIGEVVKMLPPSVNRSLPS 633
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIX 410
WN +I HG E+ + F EM+ M ++P VTF+ +
Sbjct: 634 WNILISALGRHGYFEEVCATFHEMLEMG--------------------IKPGHVTFVSLL 673
Query: 411 XXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDG 470
G +Y+ + FGL+P H C+ +LL +G + EAE + M
Sbjct: 674 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMP---- 729
Query: 471 DMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVS 530
M ++W +LLA C+ ++ G + A+ L + P++ + Y ++A +WE+V
Sbjct: 730 -MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVE 788
Query: 531 TVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
V+K M + + S V LK V +F + ++ H + ++++ + +
Sbjct: 789 NVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 842
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 131/289 (45%), Gaps = 36/289 (12%)
Query: 88 TLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF 147
+L+S ++ VD+ IF + DT N++ +AY + + H+ + F SL RF
Sbjct: 200 SLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQ--NGHIEESFRIFSLMRRFH 256
Query: 148 P--NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
NS T L+ G+ GR H V+K GFDSV+ V N+L+ MYA G A
Sbjct: 257 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 316
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
++F M +DL SWNS++ ++ G ++L
Sbjct: 317 LVFKQMPTKDLISWNSLMASFVNDG--------------RSL-----------------D 345
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
AL L M S G N T + AC ++GR +HG ++ + I+ AL+
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
MY K + + RV +M R++V+WNA+I G+ P+ L+ F M
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 454
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
Query: 226 YLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
Y + G + A LFD+MP +N V+WN M+SG ++ ++ FR+M +G+K ++ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 286 VCVVTACGRSARL-KEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
+VTACGRS + +EG VHG + + S + + TA++ +Y V + +VFE M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 345 NRNLVSWNAMILGHCIHGSPEDGLSLFDEMVG 376
+RN+VSW ++++G+ G PE+ + ++ M G
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRG 153
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 32/228 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIV-SGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV 206
P+S+ L+ +CG +G + G + H V K+G S + V +++H+Y G V +R
Sbjct: 56 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 115
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
+F+ M PD+N+V+W ++ G+ P
Sbjct: 116 VFEEM-------------------------------PDRNVVSWTSLMVGYSDKGEPEEV 144
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
+ +++ M G+ N +M V+++CG GR + G +++ S L ++ +LI M
Sbjct: 145 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 204
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
V+ A +F++M+ R+ +SWN++ + +G E+ +F M
Sbjct: 205 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 252
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
N + +I SCG GR+ QV+K+G +S L V+NSLI M G+V A
Sbjct: 159 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA---- 214
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
+ +FD M +++ ++WN + + + + + + +
Sbjct: 215 ---------------------------NYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 247
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
+F M + N+TT+ +++ G K GR +HG +++M S + + L+ MY
Sbjct: 248 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 307
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDK 379
R A VF++M ++L+SWN+++ G D L L M+ K
Sbjct: 308 GAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 192/439 (43%), Gaps = 58/439 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFD--SVLPVQNSLIHMYADCGDVQVAR 205
P+ +T L+ +C +TG I +G++ H ++++GF S + SL+ +Y CG + AR
Sbjct: 208 PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSAR 267
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
FD + + + SW+S++ GY + G+ A LF K L N I F
Sbjct: 268 KAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF-----KRLQELNSQIDSF-------- 314
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
+ ++ A L++G+ + +++ S + +++D
Sbjct: 315 ------------------ALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVD 356
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVE 385
MY KC V+ A + F M ++++SW +I G+ HG + + +F EM+ +
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN------- 409
Query: 386 IDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCM 445
++PDEV ++ + G F ++ + G+KP H C+
Sbjct: 410 -------------IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456
Query: 446 ANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDM 505
+LL AG + EA+ + M + +W LL+LCR D+ LG++ K+L+ +
Sbjct: 457 VDLLGRAGRLKEAKHLIDTMP-----IKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511
Query: 506 YPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKR 565
KN A Y + +Y A W ++L + L G S V+++ VH F+ E
Sbjct: 512 DAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDS 571
Query: 566 HEGIEAVNMMMDELARRFR 584
H + + E RR R
Sbjct: 572 HPLTPVIQETLKEAERRLR 590
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 146/325 (44%), Gaps = 52/325 (16%)
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
R +PN +TF + +CG + G + H +K GF+ ++ V NSL+ MY+ CG +
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
A +F ++ R L SWN+M+ G++ AG S A F +M + N +K R
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN-----------IKERP 208
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIR--MFSRSSLILD 320
+ T+ ++ AC + + G+ +HG ++R SS +
Sbjct: 209 DEF------------------TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 321 TALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
+L+D+Y KC + A + F+++ + ++SW+++ILG+ G + + LF + ++
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS- 309
Query: 381 KGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFA 440
+ID + + IG+ ++ ++ GL+ +
Sbjct: 310 ----QIDSFALS------------SIIGVFADFALLRQGKQMQALAVKLPS--GLETSV- 350
Query: 441 HLWCMANLLANAGLVDEAEKCLRNM 465
L + ++ GLVDEAEKC M
Sbjct: 351 -LNSVVDMYLKCGLVDEAEKCFAEM 374
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 108/245 (44%), Gaps = 39/245 (15%)
Query: 147 FPNS-YTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
PN V ++ C G G + H ++K+G L N LI MY C + +A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
+FDSM R++ SW++++ G++ GDL
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKG------------------------------- 90
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
+L LF EMG G+ N T + ACG L++G +HG +++ + + +L+D
Sbjct: 91 SLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVD 150
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVE 385
MY KC R+ A +VF R+ +R+L+SWNAMI G G L F M E
Sbjct: 151 MYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ-------EAN 203
Query: 386 IDESP 390
I E P
Sbjct: 204 IKERP 208
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 194/432 (44%), Gaps = 58/432 (13%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
N ++S Y +++ + + FR ++F+ P+ T ++ SC + G++ H VI
Sbjct: 385 NAMLSGY-SNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
+ + + LI +Y++C ++++ +FD
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISECIFD---------------------------- 475
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG-LKGNATTMVCVVTACGRSA 296
D + + ++ WN MISGF AL LFR M L N T+ V+++C R
Sbjct: 476 --DCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLC 533
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMIL 356
L GR HG +++ S ++TAL DMYCKC ++ A + F+ + +N V WN MI
Sbjct: 534 SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIH 593
Query: 357 GHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXX 416
G+ +G ++ + L+ +M+ GE +PD +TF+ +
Sbjct: 594 GYGHNGRGDEAVGLYRKMIS----SGE----------------KPDGITFVSVLTACSHS 633
Query: 417 XXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRES 476
G M + G++P H C+ + L AG +++AEK L + S
Sbjct: 634 GLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEK-LAEATPYKS----SS 688
Query: 477 MLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLM 536
+LW LL+ CR DV L + A+ L+ + P++ A Y L Y+ QW++ + +Q LM
Sbjct: 689 VLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLM 748
Query: 537 KERRLGIIPGSS 548
+ R+ PG S
Sbjct: 749 NKNRVHKTPGQS 760
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 1/194 (0%)
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
C +SG+ H +++ G S + N L+ +Y +CGD AR +FD M RD+ SWN+ +
Sbjct: 21 CKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLT 80
Query: 225 GYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
+ GDL A +FD MP++++V+WN MIS ++ AL +++ M G + T
Sbjct: 81 FRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFT 140
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR-RVELATRVFERM 343
+ V++AC + G HG ++ ++ + AL+ MY KC V+ RVFE +
Sbjct: 141 LASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL 200
Query: 344 TNRNLVSWNAMILG 357
+ N VS+ A+I G
Sbjct: 201 SQPNEVSYTAVIGG 214
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 38/226 (16%)
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGY-- 226
G++ H ++ GF L + NSL+ +YA D+ A ++F M ++ SWN M+ G+
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 227 ---------------------------------LEAGDLSSAHALFDVMPDKNLVTWNIM 253
+GD+ + +F +P ++ WN M
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAM 387
Query: 254 ISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-F 312
+SG+ + A+ FR+M LK + TT+ ++++C R L+ G+ +HG +IR
Sbjct: 388 LSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEI 447
Query: 313 SRSSLILDTALIDMYCKCRRVELATRVFERMTNR-NLVSWNAMILG 357
S++S I+ + LI +Y +C ++E++ +F+ N ++ WN+MI G
Sbjct: 448 SKNSHIV-SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISG 492
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 34/261 (13%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF-PNSYTFVPLIGSCGNT 163
IF N LD C N++IS + + A + + R + PN +F ++ SC
Sbjct: 473 IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRL 532
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV 223
++ GR+ H V+K+G+ S V+ +L MY CG++ AR FD++L ++ WN M+
Sbjct: 533 CSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMI 592
Query: 224 DGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
GY G A+ L+R+M S G K +
Sbjct: 593 HGYGHNG-------------------------------RGDEAVGLYRKMISSGEKPDGI 621
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFS-RSSLILDTALIDMYCKCRRVELATRVFER 342
T V V+TAC S ++ G + S+ R+ L ++D + R+E A ++ E
Sbjct: 622 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEA 681
Query: 343 MTNR-NLVSWNAMILGHCIHG 362
+ + V W ++ +HG
Sbjct: 682 TPYKSSSVLWEILLSSCRVHG 702
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 162/416 (38%), Gaps = 51/416 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N +IS + A V Y R + F P+ +T ++ +C V G +CH
Sbjct: 102 DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCH 161
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCG-DVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
+K G D + V N+L+ MYA CG V +F+S+ + S+ +++ G +
Sbjct: 162 GVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKV 221
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
A +F +M +K + ++ +S L P E + GN
Sbjct: 222 LEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSE-----IYGNEL--------- 267
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
G+ +H +R+ L L+ +L+++Y K + + A +F M N+VSWN
Sbjct: 268 --------GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWN 319
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX 412
MI+G + + M D G QP+EVT I +
Sbjct: 320 IMIVGFGQEYRSDKSVEFLTRM-----------------RDSG---FQPNEVTCISVLGA 359
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
GR F + +P+ + M + +N +EA R M +F ++
Sbjct: 360 CFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQM-QFQ-NL 412
Query: 473 SRESMLWANLLALCRFRRDVYLGEQFAKLLVDM-YPKNLACYQFLLIIYAVAAQWE 527
+ + +L+ C R + G+Q +++ KN L+ +Y+ + E
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 292 CGRSARLK-EGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
C R R K G+ +HG I+RM +S L L+D+Y +C + A +VF+ M+ R++ S
Sbjct: 15 CYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYS 74
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
WNA + C G + +FD M D V
Sbjct: 75 WNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 222/509 (43%), Gaps = 66/509 (12%)
Query: 88 TLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF 147
TLL S +D +FR ++ ++I+ Y + A +
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDR-SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKN--GFDSVLPVQNSLIHMYADCGDVQVAR 205
P+ YT ++ C + G++ H + +N GFD + V N+L+ MYA C
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKC------- 445
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
G + A +F M K++++WN +I G+ K
Sbjct: 446 ------------------------GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 266 ALKLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
AL LF + + T+ CV+ AC + +GR +HG I+R S + +L+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
DMY KC + LA +F+ + +++LVSW MI G+ +HG ++ ++LF++M + G
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM----RQAG-- 595
Query: 385 EIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWC 444
++ DE++F+ + G +F M ++P H C
Sbjct: 596 --------------IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC 641
Query: 445 MANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVD 504
+ ++LA G + +A + + NM + ++ +W LL CR DV L E+ A+ + +
Sbjct: 642 IVDMLARTGDLIKAYRFIENMP-----IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 696
Query: 505 MYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEK 564
+ P+N Y + IYA A +WE V ++K + +R L PG S +++K V+ F +
Sbjct: 697 LEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 756
Query: 565 RHEGIEAVNMMMDELARRFRMPSVDSGQS 593
+ E + + R+ R ++ G S
Sbjct: 757 SNPETENIEAFL----RKVRARMIEEGYS 781
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 33/227 (14%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
+SYTF + S + + G + H ++K+GF V NSL+ Y V AR +F
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
D M RD+ SWNS+++GY+ G + +K L
Sbjct: 254 DEMTERDVISWNSIINGYVSNG-----------LAEK--------------------GLS 282
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDMY 327
+F +M G++ + T+V V C S + GR+VH ++ FSR +T L+DMY
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT-LLDMY 341
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
KC ++ A VF M++R++VS+ +MI G+ G + + LF+EM
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 12/181 (6%)
Query: 226 YLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
Y GDL A +FD + + + WNI+++ K+ + ++ LF++M S G++ ++ T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
CV + + G +HG I++ + +L+ Y K +RV+ A +VF+ MT
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESP-------CADRGVVR 398
R+++SWN++I G+ +G E GLS+F +M+ V G +EID + CAD ++
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQML----VSG-IEIDLATIVSVFAGCADSRLIS 313
Query: 399 L 399
L
Sbjct: 314 L 314
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 177/363 (48%), Gaps = 26/363 (7%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
N+L+ GD+ A+ LFD M RD+ S+ SM+DGY + GD+ SA LF+ ++
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR 270
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
W+ +I G+ + P A K+F EM + +K + MV +++AC + + V +
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYL 330
Query: 309 -IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDG 367
RM SS + ALIDM KC ++ A ++FE M R+LVS+ +M+ G IHG +
Sbjct: 331 HQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEA 390
Query: 368 LSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFK 427
+ LF++MV D G+V PDEV F I G YF+
Sbjct: 391 IRLFEKMV-----------------DEGIV---PDEVAFTVILKVCGQSRLVEEGLRYFE 430
Query: 428 QMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCR 487
M + + + H C+ NLL+ G + EA + +++M F+ S W +LL C
Sbjct: 431 LMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP-FEAHASA----WGSLLGGCS 485
Query: 488 FRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGS 547
+ + E A+ L ++ P++ Y L IYA +W +V+ ++ M E + I G
Sbjct: 486 LHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGR 545
Query: 548 SLV 550
S +
Sbjct: 546 SWI 548
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 59/262 (22%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ YTF ++ C N G + G H V++ GFD + V S + Y C D+ AR +
Sbjct: 108 PDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKV 167
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F M R+ SW ++V Y+++G+L A ++FD+MP++NL +WN ++ G +K+ + A
Sbjct: 168 FGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAK 227
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
KLF EM + +I T++ID Y
Sbjct: 228 KLFDEM---------------------------------------PKRDIISYTSMIDGY 248
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
K + A +FE ++ +W+A+ILG+ +G P + +F EM
Sbjct: 249 AKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM------------- 295
Query: 388 ESPCADRGVVRLQPDEVTFIGI 409
CA ++PDE +G+
Sbjct: 296 ---CAK----NVKPDEFIMVGL 310
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL-KGNATTMVCVVTACGRSA 296
+F+ +P WN +I G+ + + M GL + + T V+ C +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMIL 356
+++ G SVHG ++R+ +++ T+ +D Y KC+ + A +VF M RN VSW A+++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 357 GHCIHGSPEDGLSLFDEM 374
+ G E+ S+FD M
Sbjct: 185 AYVKSGELEEAKSMFDLM 202
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 186/404 (46%), Gaps = 31/404 (7%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
+++ F + SC V G HA +K+ F S V +L+ MY C V AR LF
Sbjct: 47 DAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLF 106
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALF---DVMPDKNLVTWNIMISGFLKARNPGY 265
D + R+ WN+M+ Y G + A L+ DVMP+++ ++N +I G + + Y
Sbjct: 107 DEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSY 164
Query: 266 -ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
A++ +R+M K N T++ +V+AC + + +H R L + L+
Sbjct: 165 RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLV 224
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
+ Y +C + VF+ M +R++V+W+++I + +HG E L F EM
Sbjct: 225 EAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEM---------- 274
Query: 385 EIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWC 444
+ ++ PD++ F+ + YFK+M +GL+ + H C
Sbjct: 275 ----------ELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSC 324
Query: 445 MANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVD 504
+ ++L+ G +EA K ++ M + + W LL CR ++ L E A+ L+
Sbjct: 325 LVDVLSRVGRFEEAYKVIQAMPE-----KPTAKTWGALLGACRNYGEIELAEIAARELLM 379
Query: 505 MYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSS 548
+ P+N A Y L IY + E ++ MKE + + PGSS
Sbjct: 380 VEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 119 NTVISAYCKSHD-PHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
N +I + D + A FY + + FRF PN T + L+ +C G ++ H+
Sbjct: 150 NAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAF 209
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
+N + +++ L+ Y CG + +++FDSM RD+ +W+S++ Y GD SA
Sbjct: 210 RNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALK 269
Query: 238 LFDVMPDKNLVTWNIMISGFLKA-RNPGY---ALKLFREM-GSVGLKGNATTMVCVVTAC 292
F M + +I LKA + G AL F+ M G GL+ + C+V
Sbjct: 270 TFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVL 329
Query: 293 GRSARLKEGRSV 304
R R +E V
Sbjct: 330 SRVGRFEEAYKV 341
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 246 NLVTWNIMISGFLKARNPGYALKLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSV 304
L++ +S + N AL LF +M S L +A + +C + R G SV
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 305 HGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSP 364
H ++ S+ + AL+DMY KC V A ++F+ + RN V WNAMI + G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 365 EDGLSLFDEM 374
++ + L++ M
Sbjct: 131 KEAVELYEAM 140
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 186/420 (44%), Gaps = 61/420 (14%)
Query: 120 TVISAYCK-SHDPHLAQVF-YFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
++ Y K S DP + ++F R ++ T + L+ +CGN G+ H I
Sbjct: 180 VLMKGYLKYSKDPEVFRLFCLMRDTGLAL--DALTLICLVKACGNVFAGKVGKCVHGVSI 237
Query: 178 KNGF-DSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
+ F D +Q S+I MY C R+L +A
Sbjct: 238 RRSFIDQSDYLQASIIDMYVKC------RLL-------------------------DNAR 266
Query: 237 ALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA 296
LF+ D+N+V W +ISGF K A LFR+M + N T+ ++ +C
Sbjct: 267 KLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLG 326
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMIL 356
L+ G+SVHG +IR + T+ IDMY +C +++A VF+ M RN++SW++MI
Sbjct: 327 SLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMIN 386
Query: 357 GHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXX 416
I+G E+ L F +M + V P+ VTF+ +
Sbjct: 387 AFGINGLFEEALDCFHKMKSQNVV--------------------PNSVTFVSLLSACSHS 426
Query: 417 XXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRES 476
G F+ MT +G+ P H CM +LL AG + EA+ + NM + +
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMP-----VKPMA 481
Query: 477 MLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLM 536
W LL+ CR ++V L + A+ L+ M P+ + Y L IYA A WE V+ V++ M
Sbjct: 482 SAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKM 541
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 164/405 (40%), Gaps = 57/405 (14%)
Query: 119 NTVISAYCKSHDPHLAQVF--YFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQV 176
NT++S Y KS + V Y R R +S+ V I +C G + +G H
Sbjct: 76 NTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLA 135
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
+KNG D V SL+ MYA + G + SA
Sbjct: 136 MKNGLDKDDYVAPSLVEMYA-------------------------------QLGTMESAQ 164
Query: 237 ALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA 296
+FD +P +N V W +++ G+LK +LF M GL +A T++C+V ACG
Sbjct: 165 KVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVF 224
Query: 297 RLKEGRSVHG-SIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
K G+ VHG SI R F S L ++IDMY KCR ++ A ++FE +RN+V W +I
Sbjct: 225 AGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLI 284
Query: 356 LGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE--SPCADRGVVR-------------LQ 400
G + LF +M+ + + + C+ G +R ++
Sbjct: 285 SGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIE 344
Query: 401 PDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEK 460
D V F R+ F M + N M N GL +EA
Sbjct: 345 MDAVNFTSFIDMYARCGNIQMARTVFDMMPE-----RNVISWSSMINAFGINGLFEEALD 399
Query: 461 CLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLG-EQFAKLLVD 504
C M ++ S+ + +LL+ C +V G +QF + D
Sbjct: 400 CFHKMK--SQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRD 442
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMP--DKNLVTWNIMISGFLKARNPGYA--LKLFREMGS 275
+S+ + Y+++ L A + F+ +P +N +WN ++SG+ K++ Y+ L L+ M
Sbjct: 43 SSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR 102
Query: 276 VGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVEL 335
++ +V + AC L+ G +HG ++ + +L++MY + +E
Sbjct: 103 HCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMES 162
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLF 371
A +VF+ + RN V W ++ G+ + + LF
Sbjct: 163 AQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLF 198
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 207/471 (43%), Gaps = 57/471 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D T+IS Y + P A +F+ + LRF + PN +T +I + G + H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+K GFDS + V ++L+ D Y G +
Sbjct: 185 GFCVKCGFDSNVHVGSALL-------------------------------DLYTRYGLMD 213
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
A +FD + +N V+WN +I+G + AL+LF+ M G + + + + AC
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
+ L++G+ VH +I+ + L+DMY K + A ++F+R+ R++VSWN+
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
++ + HG ++ + F+EM V ++P+E++F+ +
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEM--------------------RRVGIRPNEISFLSVLTAC 373
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
G Y++ M G+ P H + +LL AG ++ A + + M +
Sbjct: 374 SHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP-----IE 427
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQ 533
+ +W LL CR ++ LG A+ + ++ P + + L IYA +W + + V+
Sbjct: 428 PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVR 487
Query: 534 KLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
K MKE + P S V+++ +H F +++RH E + +E+ + +
Sbjct: 488 KKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 156 LIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARD 215
L+ C ++ GR HA ++++ F + + N+L++MYA C
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC----------------- 108
Query: 216 LASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGS 275
G L A +F+ MP ++ VTW +ISG+ + P AL F +M
Sbjct: 109 --------------GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 276 VGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVEL 335
G N T+ V+ A R G +HG ++ S++ + +AL+D+Y + ++
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
A VF+ + +RN VSWNA+I GH E L LF M+
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 254
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 199/485 (41%), Gaps = 57/485 (11%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRF-RFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D++ +++ Y K P A V Y R PN +T + + CI G++
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H +++ G DS D W+S++D Y + G +
Sbjct: 241 HGHIVRAGLDS-------------------------------DEVLWSSLMDMYGKCGCI 269
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
A +FD + +K++V+W MI + K+ LF E+ + N T V+ AC
Sbjct: 270 DEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNAC 329
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
+ G+ VHG + R+ ++L+DMY KC +E A V + +LVSW
Sbjct: 330 ADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWT 389
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX 412
++I G +G P++ L FD ++ +PD VTF+ +
Sbjct: 390 SLIGGCAQNGQPDEALKYFDLLLKSG--------------------TKPDHVTFVNVLSA 429
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
G +F +T+ L H C+ +LLA +G ++ + + M M
Sbjct: 430 CTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP-----M 484
Query: 473 SRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTV 532
LWA++L C ++ L E+ A+ L + P+N Y + IYA A +WE +
Sbjct: 485 KPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKM 544
Query: 533 QKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFRMPSVDSGQ 592
+K M+E + PGSS ++K H F ++ H + + EL ++ +
Sbjct: 545 RKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPAT 604
Query: 593 SSVRH 597
S V H
Sbjct: 605 SLVLH 609
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 161/340 (47%), Gaps = 28/340 (8%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P + T+ LI C T + G+K H + +GF + + N L+ MYA CG + AR +
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD M RDL SWN MV+GY E G L A LFD M +K+ +W M++G++K P AL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 268 KLFREMGSV-GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
L+ M V + N T+ V A ++ G+ +HG I+R S +L ++L+DM
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y KC ++ A +F+++ +++VSW +MI + +G SLF E+VG
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG---------- 312
Query: 387 DESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
C +P+E TF G+ G+ MT V G P +
Sbjct: 313 ---SCE-------RPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLV 361
Query: 447 NLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALC 486
++ G ++ A+ + DG + + W +L+ C
Sbjct: 362 DMYTKCGNIESAKHVV------DGCPKPDLVSWTSLIGGC 395
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 221 SMVDGYLEAGDLSSAHALFDVMPDKNLVTWN-----IMISGFLKARNPGYAL------KL 269
+ + G++ +LSS HA DK N +++ +A G A+ KL
Sbjct: 10 TTLHGFILKRNLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKL 69
Query: 270 FREMGSV---GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
RE + K A+T ++ C ++ L+EG+ VH I +++ L+ M
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
Y KC + A +VF+ M NR+L SWN M+ G+ G E+ LFDEM D
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD 181
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 222/477 (46%), Gaps = 64/477 (13%)
Query: 114 DTFCVNTVISAYCKS--HDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRK 171
D NT+ISA+ ++ D L V+ + F+ + T L+ + N G++
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI--DYITVTALLSAASNLRNKEIGKQ 440
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDS--MLARDLASWNSMVDGYLEA 229
HA +I+ G + + LI MY+ G +++++ LF+ RD A+WNSM+ GY +
Sbjct: 441 THAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQN 499
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
G +F M ++N ++ NA T+ ++
Sbjct: 500 GHTEKTFLVFRKMLEQN-------------------------------IRPNAVTVASIL 528
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLV 349
AC + + G+ +HG IR + ++ + +AL+DMY K ++ A +F + RN V
Sbjct: 529 PACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSV 588
Query: 350 SWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGI 409
++ MILG+ HG E +SLF M + G+ +PD +TF+ +
Sbjct: 589 TYTTMILGYGQHGMGERAISLFLSM-----------------QESGI---KPDAITFVAV 628
Query: 410 XXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFD 469
G F++M +V+ ++P+ H C+ ++L G V+EA + ++ + + +
Sbjct: 629 LSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGE-E 687
Query: 470 GDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDM-YPKNLACYQFLLI-IYAVAAQWE 527
G+++ LW +LL C+ ++ L E ++ L KN + Y+ LL +YA +W+
Sbjct: 688 GNIAE---LWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWK 744
Query: 528 NVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
+V V++ M+E+ L G S +++ V+ F ++ H + ++D LA+ R
Sbjct: 745 SVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 29/270 (10%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPN--SYTFVPLIGSCGNTGCIVSGRKC 172
T NT+I + ++ PH A +FY R + F N +YT+ + +C T + +G+
Sbjct: 70 TVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAV 129
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H +I+ +S V NSL++MY C + A D ++ +
Sbjct: 130 HCHLIRCLQNSSRVVHNSLMNMYVSC------------LNAPDCFEYDVV---------- 167
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
+FD M KN+V WN +IS ++K A + F M + +K + + V V A
Sbjct: 168 ---RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 293 GRSARLKEGRSVHGSIIRMFSR--SSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
S +K+ +G ++++ L + ++ I MY + +E + RVF+ RN+
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
WN MI + + + + LF E +G ++
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEI 314
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 32/258 (12%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
NT+IS Y K+ A + +R P+ +FV + + + I + ++K
Sbjct: 183 NTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLK 242
Query: 179 NGFDSV--LPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
G + V L V +S I MYA+ GD++ +R +FDS + R++ WN+M+ Y++ L +
Sbjct: 243 LGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESI 302
Query: 237 ALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA 296
LF +GS + + T + +A
Sbjct: 303 ELF------------------------------LEAIGSKEIVSDEVTYLLAASAVSALQ 332
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMIL 356
+++ GR HG + + F +++ +L+ MY +C V + VF M R++VSWN MI
Sbjct: 333 QVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMIS 392
Query: 357 GHCIHGSPEDGLSLFDEM 374
+G ++GL L EM
Sbjct: 393 AFVQNGLDDEGLMLVYEM 410
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGN--ATTMVC 287
G+ A LFD +P V WN +I GF+ P AL + M N A T
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 288 VVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRV------ELATRVFE 341
+ AC + LK G++VH +IR SS ++ +L++MY C ++ +VF+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 342 RMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
M +N+V+WN +I + G + F M+ M+
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME 209
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 195/403 (48%), Gaps = 36/403 (8%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV 248
N++I YA + A LF M RD ASWN+M+ G++ +++ A LFD MP+KN++
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVI 296
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVG-LKGNATTMVCVVTACGRSARLKEGRSVHGS 307
+W MI+G+++ + AL +F +M G +K N T V +++AC A L EG+ +H
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 308 IIRMFSRSSLILDTALIDMYCKCRRVELATRVFER--MTNRNLVSWNAMILGHCIHGSPE 365
I + + + I+ +AL++MY K + A ++F+ + R+L+SWN+MI + HG +
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGK 416
Query: 366 DGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSY 425
+ + ++++M + G +P VT++ + G +
Sbjct: 417 EAIEMYNQM----RKHG----------------FKPSAVTYLNLLFACSHAGLVEKGMEF 456
Query: 426 FKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKF----DGDMSRESMLWAN 481
FK + L H C+ +L AG L+++ F D +SR +
Sbjct: 457 FKDLVRDESLPLREEHYTCLVDLCGRAGR-------LKDVTNFINCDDARLSRS--FYGA 507
Query: 482 LLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRL 541
+L+ C +V + ++ K +++ + Y + IYA + E + ++ MKE+ L
Sbjct: 508 ILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGL 567
Query: 542 GIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARRFR 584
PG S V + H F V +K H EA++ ++ +L + R
Sbjct: 568 KKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 129/280 (46%), Gaps = 40/280 (14%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+F +N N V S Y S P + Q + LIG G
Sbjct: 18 VFPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEW-----------------LIGELCKVG 60
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQN-----SLIHMYADCGDVQVARVLFDSMLAR-DLAS 218
I RK FD LP ++ +I Y GD++ AR LFD + +R ++ +
Sbjct: 61 KIAEARKL--------FDG-LPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 219 WNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL 278
W +MV GYL + LS A LF MP++N+V+WN MI G+ ++ AL+LF EM
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP---- 167
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATR 338
+ N + +V A + R+ E + + R ++ TA++D K +V+ A R
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMN----LFERMPRRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 339 VFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
+F+ M RN++SWNAMI G+ + ++ LF M D
Sbjct: 224 LFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 163 TGCIVSGRKCHAQVIKNGFDSVLPV--QNSLIHMYADCGDVQVARVLFDSMLARDLASWN 220
TG I G A+ + + DS V +++ Y + +A +LF M R++ SWN
Sbjct: 85 TGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWN 144
Query: 221 SMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
+M+DGY ++G + A LFD MP++N+V+WN M+ ++ A+ LF M +
Sbjct: 145 TMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RR 200
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFS---RSSLILDTALIDMYCKCRRVELAT 337
+ + +V ++ ++ E R R+F ++I A+I Y + R++ A
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEAR-------RLFDCMPERNIISWNAMITGYAQNNRIDEAD 253
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
++F+ M R+ SWN MI G + LFD M
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 40/204 (19%)
Query: 185 LPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFD-VMP 243
+P LI G + AR LFD + RD+ +W ++ GY++ GD+ A LFD V
Sbjct: 46 VPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS 105
Query: 244 DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRS 303
KN+VTW M+SG+L+++ A LF+EM
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEM------------------------------ 135
Query: 304 VHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGS 363
+++ +ID Y + R++ A +F+ M RN+VSWN+M+ G
Sbjct: 136 ---------PERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGR 186
Query: 364 PEDGLSLFDEMVGMDKVKGEVEID 387
++ ++LF+ M D V +D
Sbjct: 187 IDEAMNLFERMPRRDVVSWTAMVD 210
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 24/212 (11%)
Query: 120 TVISAYCKSHDPHLAQVFYFRSLR-FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
T+I+ Y ++ + A + + LR PN T+V ++ +C + +V G++ H + K
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLA--RDLASWNSMVDGYLEAGDLSSAH 236
+ V ++L++MY+ G++ AR +FD+ L RDL SWNSM+ Y G A
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 237 ALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREM---GSVGLKGNATTMVCVV 289
+++ M VT+ ++ A ++ F+++ S+ L+ T C+V
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYT--CLV 477
Query: 290 TACGRSARLKE------------GRSVHGSII 309
CGR+ RLK+ RS +G+I+
Sbjct: 478 DLCGRAGRLKDVTNFINCDDARLSRSFYGAIL 509
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 217/467 (46%), Gaps = 41/467 (8%)
Query: 106 FRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGC 165
F Y N D F ++V++ Y K A+V + + + + + ++ G
Sbjct: 145 FGYKN---DVFVCSSVLNLYMKCGKMDEAEVLFGKMAK----RDVICWTTMVTGFAQAGK 197
Query: 166 IVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR----VLFDSMLARDLASWNS 221
+ + + ++ GF V L+ D GD ++ R L+ + L ++ S
Sbjct: 198 SLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETS 257
Query: 222 MVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGN 281
+VD Y + G + A +F M K V+W +ISGF + A + EM S+G + +
Sbjct: 258 LVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPD 317
Query: 282 ATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSL--ILDTALIDMYCKCRRVELATRV 339
T+V V+ AC + LK GR VH I++ R L + TAL+DMY KC + + +
Sbjct: 318 LVTLVGVLVACSQVGSLKTGRLVHCYILK---RHVLDRVTATALMDMYSKCGALSSSREI 374
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRL 399
FE + ++LV WN MI + IHG+ ++ +SLF +M ES +
Sbjct: 375 FEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMT------------ES--------NI 414
Query: 400 QPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAE 459
+PD TF + G+ +F M + + ++P+ H C+ +LLA AG V+EA
Sbjct: 415 EPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEAL 474
Query: 460 KCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLII 519
+ N K D + +W LL+ C R++ +G+ A ++ + P ++ +
Sbjct: 475 DMI-NSEKLDNALP----IWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNF 529
Query: 520 YAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
+A A +W+ V+ V+KLM+ + +PG S +++ + F + + H
Sbjct: 530 FATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKA 260
+ +L S ++RDL + + G++S A +FD +P + + +N MI + +
Sbjct: 41 ISTGNLLNGSSISRDLIASCGRI------GEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 261 RNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD 320
+NP L+L+ +M + ++ +++T + AC L++G +V + ++ + +
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 321 TALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
++++++Y KC +++ A +F +M R+++ W M+ G G + + EM
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREM------ 208
Query: 381 KGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFA 440
+ G R D V +G+ GRS + GL N
Sbjct: 209 -----------QNEGFGR---DRVVMLGLLQASGDLGDTKMGRSVHGYLYRT-GLPMNVV 253
Query: 441 HLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLA 484
+ ++ A G ++ A + M M + ++ W +L++
Sbjct: 254 VETSLVDMYAKVGFIEVASRVFSRM------MFKTAVSWGSLIS 291
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 206/462 (44%), Gaps = 56/462 (12%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+F P DT N +I+ + A + + F P++ + L+ +
Sbjct: 327 VFDQIERP-DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPM 385
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
+ G + H+ +IK GF + L V NSL+ MY C D+ LF+
Sbjct: 386 ALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE--------------- 430
Query: 225 GYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
D + + V+WN +++ L+ P L+LF+ M + + T
Sbjct: 431 ---------------DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
M ++ C + LK G VH ++ + LIDMY KC + A R+F+ M
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD 535
Query: 345 NRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEV 404
NR++VSW+ +I+G+ G E+ L LF EM K G ++P+ V
Sbjct: 536 NRDVVSWSTLIVGYAQSGFGEEALILFKEM----KSAG----------------IEPNHV 575
Query: 405 TFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRN 464
TF+G+ G + M G+ P H C+ +LLA AG ++EAE+ +
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 465 MAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAA 524
M K + D+ ++W LL+ C+ + +V+L ++ A+ ++ + P N + L ++A +
Sbjct: 636 M-KLEPDV----VVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSG 690
Query: 525 QWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
WEN + ++ MK+ + IPG S ++++ +H F + H
Sbjct: 691 NWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFH 732
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 36/261 (13%)
Query: 118 VNTVISAYCKSHDPHLA-QVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQV 176
+N I++ CKS+ A + F F F T++ LI +C ++ + GRK H +
Sbjct: 34 MNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHI 93
Query: 177 IKNG--FDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSS 234
+ + +D++L N ++ MY CG ++ AR
Sbjct: 94 LNSNCKYDTIL--NNHILSMYGKCGSLRDAR----------------------------- 122
Query: 235 AHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGR 294
+FD MP++NLV++ +I+G+ + A++L+ +M L + ++ AC
Sbjct: 123 --EVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS 180
Query: 295 SARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAM 354
S+ + G+ +H +I++ S S LI ALI MY + ++ A+RVF + ++L+SW+++
Sbjct: 181 SSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 355 ILGHCIHGSPEDGLSLFDEMV 375
I G G + LS EM+
Sbjct: 241 IAGFSQLGFEFEALSHLKEML 261
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 32/275 (11%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
+VI+ Y ++ A Y + L+ P+ + F +I +C ++ + G++ HAQVIK
Sbjct: 137 TSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK 196
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
S L QN+LI MY V F+ M S A +
Sbjct: 197 LESSSHLIAQNALIAMY----------VRFNQM---------------------SDASRV 225
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL-KGNATTMVCVVTACGRSAR 297
F +P K+L++W+ +I+GF + AL +EM S G+ N + AC R
Sbjct: 226 FYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLR 285
Query: 298 LKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILG 357
G +HG I+ + I +L DMY +C + A RVF+++ + SWN +I G
Sbjct: 286 PDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG 345
Query: 358 HCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCA 392
+G ++ +S+F +M + + + CA
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%)
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
T + ++ AC S L +GR +H I+ + IL+ ++ MY KC + A VF+ M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 344 TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
RNLVS+ ++I G+ +G + + L+ +M+ D V
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 191/407 (46%), Gaps = 49/407 (12%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
N V L+ +CG IV+G+ H + GFD ++V F
Sbjct: 207 NETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQ-----------------SKVGF 249
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
+ +LA S++D Y + GDL +A LFD MP++ LV+WN +I+G+ + + AL
Sbjct: 250 NVILA------TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALC 303
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDMY 327
+F +M +G+ + T + V+ A + G+S+H + + F + + I+ AL++MY
Sbjct: 304 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV-CALVNMY 362
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
K E A + FE + ++ ++W +I+G HG + LS+F M + KG
Sbjct: 363 AKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRM----QEKGNA--- 415
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
PD +T++G+ G+ YF +M D+ GL+P H CM +
Sbjct: 416 ------------TPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVD 463
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
+L+ AG +EAE+ ++ M + +W LL C ++ L ++ ++ +
Sbjct: 464 ILSRAGRFEEAERLVKTMP-----VKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEE 518
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKY 554
Y L IYA A +W +V +++ MK +R+ + G S V+ +
Sbjct: 519 LGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVETMF 565
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 176/395 (44%), Gaps = 68/395 (17%)
Query: 90 LSRASNLC-------GVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSL 142
LSR + C + + +F + P + N++I Y S +P A +FY L
Sbjct: 41 LSRLIDFCTTCPETMNLSYARSVFESIDCP-SVYIWNSMIRGYSNSPNPDKALIFYQEML 99
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
R + P+ +TF ++ +C I G H V+K GF+ + V L+HMY CG+V
Sbjct: 100 RKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVN 159
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
+F+ D+ WN +V W +ISGF+
Sbjct: 160 YGLRVFE-----DIPQWN--------------------------VVAWGSLISGFVNNNR 188
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM----FSRS--- 315
A++ FREM S G+K N T MV ++ ACGR + G+ HG + + + +S
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVG 248
Query: 316 -SLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
++IL T+LIDMY KC + A +F+ M R LVSWN++I G+ +G E+ L +F +M
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 375 VGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFG 434
+ D G+ PD+VTF+ + G+S ++ G
Sbjct: 309 L-----------------DLGIA---PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT-G 347
Query: 435 LKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFD 469
+ A + + N+ A G + A+K ++ K D
Sbjct: 348 FVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKD 382
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 104/253 (41%), Gaps = 40/253 (15%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N++I+ Y ++ D A + L P+ TF+ +I + GC G+ HA V K
Sbjct: 286 NSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSK 345
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
GF + +L++MYA GD + A+ F+ + +D +W ++ G G + A ++
Sbjct: 346 TGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSI 405
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT----TMVCVVTACGR 294
F M + KGNAT T + V+ AC
Sbjct: 406 FQRMQE----------------------------------KGNATPDGITYLGVLYACSH 431
Query: 295 SARLKEGRSVHGSIIRMFSRSSLILDTA-LIDMYCKCRRVELATRVFERMTNR-NLVSWN 352
++EG+ + + + ++D+ + R E A R+ + M + N+ W
Sbjct: 432 IGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 491
Query: 353 AMILGHCIHGSPE 365
A++ G IH + E
Sbjct: 492 ALLNGCDIHENLE 504
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 204/448 (45%), Gaps = 63/448 (14%)
Query: 119 NTVISAYCKSHDPHLAQVF-YFRSL-RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQV 176
N++IS Y +H + Q FR + R P+++T I +C N G + G++ H V
Sbjct: 374 NSLISLY--AHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHV 431
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
I+ VQNSLI MY+ ++G + SA
Sbjct: 432 IRTDVSDEF-VQNSLIDMYS-------------------------------KSGSVDSAS 459
Query: 237 ALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA 296
+F+ + +++VTWN M+ GF + N A+ LF M L+ N T + V+ AC
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMIL 356
L++G+ VH +I + L DTALIDMY KC + A VF M++R++VSW++MI
Sbjct: 520 SLEKGKWVHHKLI-ISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMIN 578
Query: 357 GHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXX 416
+ +HG +S F++MV + G +P+EV F+ +
Sbjct: 579 AYGMHGRIGSAISTFNQMV-----------------ESGT---KPNEVVFMNVLSACGHS 618
Query: 417 XXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRES 476
G+ YF M FG+ PN H C +LL+ +G + EA + ++ M F D S
Sbjct: 619 GSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMP-FLADAS--- 673
Query: 477 MLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLM 536
+W +L+ CR + + + + L D+ + Y L IYA +WE ++ M
Sbjct: 674 -VWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAM 732
Query: 537 KERRLGIIPGSSLVDLKYIVHNFKVSEK 564
K L +PG S +++ V F E+
Sbjct: 733 KSSNLKKVPGYSAIEIDQKVFRFGAGEE 760
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 166/417 (39%), Gaps = 73/417 (17%)
Query: 81 RIPFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFR 140
R P L+ + + D + L+F F P D+F +I H A Y R
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP-DSFMYGVLIKCNVWCHLLDAAIDLYHR 90
Query: 141 SLRFRFFPNSYTFVPLIGSC-GNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCG 199
+ + + F ++ +C G+ + G K H ++IK G D ++ SL+ MY
Sbjct: 91 LVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYG--- 147
Query: 200 DVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLK 259
+ G+LS A +FD MP ++LV W+ ++S L+
Sbjct: 148 ----------------------------QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
AL++F+ M G++ +A TM+ VV C L+ RSVHG I R L
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 320 DTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDK 379
+L+ MY KC + + R+FE++ +N VSW AMI + E L F EM+
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG- 298
Query: 380 VKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFG----- 434
++P+ VT + G+S V G
Sbjct: 299 -------------------IEPNLVTLYSVLSSCGLIGLIREGKS-------VHGFAVRR 332
Query: 435 -LKPNFAHL-WCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFR 489
L PN+ L + L A G + + E LR ++ R + W +L++L R
Sbjct: 333 ELDPNYESLSLALVELYAECGKLSDCETVLRVVS------DRNIVAWNSLISLYAHR 383
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 36/256 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P++ T + ++ C GC+ R H Q+ + FD + NSL+ MY+ C
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKC--------- 250
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
GDL S+ +F+ + KN V+W MIS + + AL
Sbjct: 251 ----------------------GDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKAL 288
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHG-SIIRMFSRSSLILDTALIDM 326
+ F EM G++ N T+ V+++CG ++EG+SVHG ++ R + L AL+++
Sbjct: 289 RSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVEL 348
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGE--- 383
Y +C ++ V +++RN+V+WN++I + G L LF +MV ++K +
Sbjct: 349 YAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMV-TQRIKPDAFT 407
Query: 384 VEIDESPCADRGVVRL 399
+ S C + G+V L
Sbjct: 408 LASSISACENAGLVPL 423
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 149/348 (42%), Gaps = 55/348 (15%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
+IS+Y + A + ++ PN T ++ SCG G I G+ H ++
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR 331
Query: 179 NGFD-SVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
D + + +L+ +YA+CG LS
Sbjct: 332 RELDPNYESLSLALVELYAECGK-------------------------------LSDCET 360
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSAR 297
+ V+ D+N+V WN +IS + AL LFR+M + +K +A T+ ++AC +
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 298 LKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILG 357
+ G+ +HG +IR S + +LIDMY K V+ A+ VF ++ +R++V+WN+M+ G
Sbjct: 421 VPLGKQIHGHVIRT-DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCG 479
Query: 358 HCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXX 417
+G+ + +SLFD M L+ +EVTF+ +
Sbjct: 480 FSQNGNSVEAISLFDYMYHS--------------------YLEMNEVTFLAVIQACSSIG 519
Query: 418 XXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNM 465
G+ ++ + GLK F + ++ A G ++ AE R M
Sbjct: 520 SLEKGKWVHHKLI-ISGLKDLFTDT-ALIDMYAKCGDLNAAETVFRAM 565
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 24/266 (9%)
Query: 204 ARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP 263
A +L L RD +++ Y G S+ +F+ P + + ++I +
Sbjct: 22 AHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLL 81
Query: 264 GYALKLFREMGSVGLKGNATTMVCVVTAC-GRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
A+ L+ + S + + V+ AC G L G VHG II+ +++T+
Sbjct: 82 DAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETS 141
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
L+ MY + + A +VF+ M R+LV+W+ ++ +G L +F MV
Sbjct: 142 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV------- 194
Query: 383 EVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMT-DVFGLKPNFAH 441
D GV +PD VT I + RS Q+T +F L +
Sbjct: 195 ----------DDGV---EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 442 LWCMANLLANAGLVDEAEKCLRNMAK 467
+ + + G + +E+ +AK
Sbjct: 242 --SLLTMYSKCGDLLSSERIFEKIAK 265
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 203/459 (44%), Gaps = 71/459 (15%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
++TF ++ + G I G++ H +K G V N+ + CG
Sbjct: 223 ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGV-----VDNTFV----SCG--------- 264
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
++D Y + GD+ A F+ MP+K V WN +I+G+ AL
Sbjct: 265 -------------LIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALC 311
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
L +M G+ + T+ ++ + A+L+ + H S+IR S ++ +TAL+D Y
Sbjct: 312 LLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYS 371
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
K RV+ A VF+++ +N++SWNA++ G+ HG D + LF++M+ +
Sbjct: 372 KWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAAN---------- 421
Query: 389 SPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANL 448
+ P+ VTF+ + G F M++V G+KP H CM L
Sbjct: 422 ----------VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIEL 471
Query: 449 LANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPK 508
L GL+DEA +R + +WA LL CR + ++ LG A+ L M P+
Sbjct: 472 LGRDGLLDEAIAFIRR-----APLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPE 526
Query: 509 NLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEK---- 564
L Y + +Y + + V + ++ + L ++P + V++ H+F ++
Sbjct: 527 KLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSY 586
Query: 565 ----RHEGIEAVNMMMDELA-------RRFRMPSVDSGQ 592
+ + + V+ +M+E++ + +P VD +
Sbjct: 587 NETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKE 625
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 31/240 (12%)
Query: 135 QVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHM 194
++F +R F T+ L+ +C I ++ + ++ NGF+ + N ++ M
Sbjct: 108 ELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLM 167
Query: 195 YADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMI 254
+ CG + AR LFD + P++NL ++ +I
Sbjct: 168 HVKCGMIIDARRLFDEI-------------------------------PERNLYSYYSII 196
Query: 255 SGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSR 314
SGF+ N A +LF+ M T ++ A + G+ +H +++
Sbjct: 197 SGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVV 256
Query: 315 SSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ + LIDMY KC +E A FE M + V+WN +I G+ +HG E+ L L +M
Sbjct: 257 DNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM 316
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 198/454 (43%), Gaps = 57/454 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D C +IS + A + + L+ +S ++ SC G G H
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
V+++G+ P NSLI MYA CG + + V+F+ M RDL SWN+++ GY + DL
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC 429
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
A LF+ M F+ + V ++ T+V ++ AC
Sbjct: 430 KALLLFEEMK--------------------------FKTVQQV----DSFTVVSLLQACS 459
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
+ L G+ +H +IR F R ++DTAL+DMY KC +E A R F+ ++ +++VSW
Sbjct: 460 SAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGI 519
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
+I G+ HG + L ++ E + ++P+ V F+ +
Sbjct: 520 LIAGYGFHGKGDIALEIYSEFLHSG--------------------MEPNHVIFLAVLSSC 559
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
G F M FG++PN HL C+ +LL A +++A K + + +
Sbjct: 560 SHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKE------NFT 613
Query: 474 RESM-LWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTV 532
R S+ + +L CR + + + ++++ P + Y L +A +W++VS
Sbjct: 614 RPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSES 673
Query: 533 QKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
M+ L +PG S +++ F ++ H
Sbjct: 674 WNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 39/265 (14%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D NT+IS Y + +R P+ TF + G + GR H
Sbjct: 209 DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH 268
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
Q++K GFD + ++ +LI MY CG +
Sbjct: 269 CQIVKTGFDVDMHLKTALITMYLKCGKEE------------------------------- 297
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+++ + + +P+K++V W +MISG ++ AL +F EM G ++ + VV +C
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCA 357
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDT----ALIDMYCKCRRVELATRVFERMTNRNLV 349
+ G SVHG ++ R LDT +LI MY KC ++ + +FERM R+LV
Sbjct: 358 QLGSFDLGASVHGYVL----RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLV 413
Query: 350 SWNAMILGHCIHGSPEDGLSLFDEM 374
SWNA+I G+ + L LF+EM
Sbjct: 414 SWNAIISGYAQNVDLCKALLLFEEM 438
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 116/249 (46%), Gaps = 9/249 (3%)
Query: 153 FVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSML 212
+ +IG G + G C + V + F + P +L+ M + ++ + L D +
Sbjct: 115 WTAMIGCYSRAGIV--GEAC-SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAV 171
Query: 213 AR----DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
D+A NSM++ Y + + A LFD M +++V+WN MISG+ N LK
Sbjct: 172 IYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILK 231
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
L M GL+ + T ++ G L+ GR +H I++ + L TALI MY
Sbjct: 232 LLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYL 291
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV--GMDKVKGEVEI 386
KC + E + RV E + N+++V W MI G G E L +F EM+ G D +
Sbjct: 292 KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIAS 351
Query: 387 DESPCADRG 395
+ CA G
Sbjct: 352 VVASCAQLG 360
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 47/272 (17%)
Query: 107 RYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRS-LRFRFFPNSYTFVPLIGSCGNTGC 165
+YFN+ ++ + SH H + F S L + P+++TF L+ +C +
Sbjct: 12 KYFNSHIN----------HLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQR 61
Query: 166 IVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDG 225
+ G H QV+ NGF S + +SL+++YA
Sbjct: 62 LSFGLSIHQQVLVNGFSSDFYISSSLVNLYA----------------------------- 92
Query: 226 YLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
+ G L+ A +F+ M ++++V W MI + +A G A L EM G+K T+
Sbjct: 93 --KFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL 150
Query: 286 VCVVTACGRSARLKEGRSVHG-SIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
+ +++ +L+ +H ++I F ++++ ++++YCKC V A +F++M
Sbjct: 151 LEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNS-MLNLYCKCDHVGDAKDLFDQME 206
Query: 345 NRNLVSWNAMILGHCIHGSPEDGLSLFDEMVG 376
R++VSWN MI G+ G+ + L L M G
Sbjct: 207 QRDMVSWNTMISGYASVGNMSEILKLLYRMRG 238
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 223/497 (44%), Gaps = 72/497 (14%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR---FFPNSYTFVPLIGSCG 161
IF P ++F +T+I +S PHL ++ ++ P+ TF LI +C
Sbjct: 69 IFDSIEIP-NSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACL 127
Query: 162 NTGCIVSGRKCHAQVIKNG-FDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWN 220
G++ H V+KNG F S VQ ++ +Y + ++LFD
Sbjct: 128 KACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVE------DKLLFD----------- 170
Query: 221 SMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
A +FD +P ++V W+++++G+++ L++F+EM G++
Sbjct: 171 --------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEP 216
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDMYCKCRRVELATRV 339
+ ++ +TAC + L +G+ +H + + + S + + TAL+DMY KC +E A V
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRL 399
FE++T RN+ SW A+I G+ +G + + D + D +K
Sbjct: 277 FEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIK------------------ 318
Query: 400 QPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAE 459
PD V +G+ GR+ + M +G+ P H C+ +L+ AG +D+A
Sbjct: 319 -PDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 460 KCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLI- 518
+ M M + +W LL CR ++V LGE + L+D+ N+ + L+
Sbjct: 378 DLIEKMP-----MKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQ 432
Query: 519 ---IYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMM 575
IY + V+ ++++R + PG SL+++ IV F + H + ++ +
Sbjct: 433 LSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTL 492
Query: 576 MDELARRFRMPSVDSGQ 592
+ L SVD+ Q
Sbjct: 493 IHLL-------SVDASQ 502
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 197/437 (45%), Gaps = 61/437 (13%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSL--RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQV 176
N+VIS C S HL + F+++ + + T + I + GN G ++ GR H
Sbjct: 549 NSVISG-CASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLA 607
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
IK+ + +QN+LI MY C D++ SA
Sbjct: 608 IKSLRELDTQLQNTLITMYGRCKDIE-------------------------------SAV 636
Query: 237 ALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA 296
+F ++ D NL +WN +IS + + +LFR + L+ N T V +++A +
Sbjct: 637 KVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLG 693
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMIL 356
G H +IR +++ + AL+DMY C +E +VF ++ +WN++I
Sbjct: 694 STSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVIS 753
Query: 357 GHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXX 416
H HG E + LF E+ + ++P++ +FI +
Sbjct: 754 AHGFHGMGEKAMELFKELSSNSE-------------------MEPNKSSFISLLSACSHS 794
Query: 417 XXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRES 476
G SY+KQM + FG+KP H + ++L AG + EA + + + + +++
Sbjct: 795 GFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGE-----PQKA 849
Query: 477 MLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLM 536
+W LL+ C + D LG++ A++L +M P N + Y L Y WE ++K++
Sbjct: 850 GVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMV 909
Query: 537 KERRLGIIPGSSLVDLK 553
++ L +PG S++D++
Sbjct: 910 EDNALKKLPGYSVIDVR 926
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 35/266 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKC 172
D NT+++ + P + YF+S+ ++ TF +I +C + + G
Sbjct: 253 DIVSWNTIMTKCLANGHPR-KSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESL 311
Query: 173 HAQVIKNGF--DSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAG 230
H VIK+G+ ++ + V NS+I MY+ CGD + A +F+ ++ RD+ S N++++G+ G
Sbjct: 312 HGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANG 371
Query: 231 DLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
A + + M + + +I T+V + +
Sbjct: 372 MFEEAFGILNQMQSVDKIQPDI------------------------------ATVVSITS 401
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRS-SLILDTALIDMYCKCRRVELATRVFERMTNRNLV 349
CG + +EGR+VHG +RM +S +L + ++IDMY KC A +F+ T+R+LV
Sbjct: 402 ICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLV 461
Query: 350 SWNAMILGHCIHGSPEDGLSLFDEMV 375
SWN+MI +G +LF E+V
Sbjct: 462 SWNSMISAFSQNGFTHKAKNLFKEVV 487
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
++ L D + N++++ Y + +LSSA +F M +++V+WN +++ L +P +L
Sbjct: 215 IETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSL 274
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIR--MFSRSSLILDTALID 325
+ F+ M G + + T CV++AC L G S+HG +I+ + + + ++I
Sbjct: 275 QYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIIS 334
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
MY KC E A VFE + R+++S NA++ G +G E+ + ++M +DK++ ++
Sbjct: 335 MYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDI 393
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 150/373 (40%), Gaps = 80/373 (21%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDS-VLPVQNSLIHMYADCGDVQVARV 206
P+ T V + CG+ GR H ++ S L V NS+I MY CG A +
Sbjct: 391 PDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAEL 450
Query: 207 LF-----------DSML-----------ARDL-------------------------ASW 219
LF +SM+ A++L S
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Query: 220 NSMVDG-----YLEA-GDLSSAHALFDVMPD-KNLVTWNIMISGFLKARNPGYALKLFRE 272
+S++ G +L+ GDL+SA + M + ++L +WN +ISG + + +L+ F+
Sbjct: 511 DSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQA 570
Query: 273 MGSVG-LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
M G ++ + T++ ++A G + +GR HG I+ L LI MY +C+
Sbjct: 571 MSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCK 630
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPC 391
+E A +VF +++ NL SWN +I + + + LF +
Sbjct: 631 DIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL----------------- 673
Query: 392 ADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLAN 451
+L+P+E+TF+G+ G + G + N + ++ ++
Sbjct: 674 ------KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR-GFQANPFVSAALVDMYSS 726
Query: 452 AGLVDEAEKCLRN 464
G+++ K RN
Sbjct: 727 CGMLETGMKVFRN 739
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 166/423 (39%), Gaps = 61/423 (14%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N++IS Y K D A+ F L R +S + G +G A I
Sbjct: 330 NSIISMYSKCGDTEAAETV-FEELVCRDVISSNAIL--------NGFAANGMFEEAFGIL 380
Query: 179 NGFDSVLPVQ---NSLIHMYADCGDVQVAR--------VLFDSMLARDLASWNSMVDGYL 227
N SV +Q +++ + + CGD+ +R + M +R L NS++D Y
Sbjct: 381 NQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYG 440
Query: 228 EAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGS--VGLKGNATTM 285
+ G + A LF ++LV+WN MIS F + A LF+E+ S K + +T+
Sbjct: 441 KCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTV 500
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
+ ++T+C S L G+SVH + ++ +S L R+E +
Sbjct: 501 LAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL------------RLETMSET------ 542
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVT 405
R+L SWN++I G G + L F M K++ ++ + G + L
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 406 FIGIX--------XXXXXXXXXXXGRSY-FKQMTDVFGL--KPNFAHLWCMANLLANAGL 454
F G+ GR + VFGL PN C+ + L+
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 455 VDEAEKCLRNMA------KFDGDMSRESMLWAN---LLALCRFRRDVYLGEQF-AKLLVD 504
E + RN+ F G +S + L + + A C R + F + LVD
Sbjct: 663 GREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVD 722
Query: 505 MYP 507
MY
Sbjct: 723 MYS 725
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 40/231 (17%)
Query: 85 LARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCV-NTVISAYCKSHDPHLAQVF-YFRSL 142
L TL++ ++ + +F ++P C N VISA S + +VF FR+L
Sbjct: 618 LQNTLITMYGRCKDIESAVKVFGLISDP--NLCSWNCVISAL--SQNKAGREVFQLFRNL 673
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
+ PN TFV L+ + G G + H +I+ GF + V +L+ MY+ CG ++
Sbjct: 674 KLE--PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLE 731
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
+F + +++WNS++ SAH F M +K
Sbjct: 732 TGMKVFRNSGVNSISAWNSVI----------SAHG-FHGMGEK----------------- 763
Query: 263 PGYALKLFREMGSVG-LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMF 312
A++LF+E+ S ++ N ++ + +++AC S + EG S + + F
Sbjct: 764 ---AMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKF 811
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%)
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
L +DLA+ + ++ Y G+L S+ LFD + +K+++ WN MI+ + A+ LF
Sbjct: 118 LLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFI 177
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
EM G + ++TT++ +A ++ +H I L AL+++Y K
Sbjct: 178 EMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGE 237
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVG 376
+ A VF M +R++VSWN ++ +G P L F M G
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 199/443 (44%), Gaps = 66/443 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKC-----HAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
P+SY V ++ +C + G + SG ++ KN F V+ +L+++YA CG ++
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF-----VRTTLVNLYAKCGKME 264
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
AR ++FD M +K++VTW+ MI G+
Sbjct: 265 KAR-------------------------------SVFDSMVEKDIVTWSTMIQGYASNSF 293
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
P ++LF +M LK + ++V +++C L G I R ++L + A
Sbjct: 294 PKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
LIDMY KC + VF+ M +++V NA I G +G + ++F G
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF----------G 403
Query: 383 EVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHL 442
+ E + + PD TF+G+ G +F ++ V+ LK H
Sbjct: 404 QTE----------KLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHY 453
Query: 443 WCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLL 502
CM +L AG++D+A + + +M M +++W LL+ CR +D L E K L
Sbjct: 454 GCMVDLWGRAGMLDDAYRLICDMP-----MRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508
Query: 503 VDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVS 562
+ + P N Y L IY+V +W+ + V+ +M ++ + IPG S ++L+ VH F
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568
Query: 563 EKRHEGIEAVNMMMDELARRFRM 585
+K H + + +++L R+
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMRL 591
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 160/359 (44%), Gaps = 35/359 (9%)
Query: 51 HHFQTLLQSSCQTPRHXXXXXXXXXXXXXXRIPFLARTLLSRASNLCGVDFTLLIFRYFN 110
+TL+ +C T H FL LL R ++ L+F +
Sbjct: 14 QQIKTLISVAC-TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQ 72
Query: 111 NPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGR 170
P + F N++I+ + +H H + + + + +TF ++ +C G
Sbjct: 73 FP-NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 171 KCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAG 230
H+ V+K GF+ D+A+ S++ Y +G
Sbjct: 132 DLHSLVVKCGFN-------------------------------HDVAAMTSLLSIYSGSG 160
Query: 231 DLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
L+ AH LFD +PD+++VTW + SG+ + A+ LF++M +G+K ++ +V V++
Sbjct: 161 RLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLS 220
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
AC L G + + M + + + T L+++Y KC ++E A VF+ M +++V+
Sbjct: 221 ACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVT 280
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE--SPCADRGVVRLQPDEVTFI 407
W+ MI G+ + P++G+ LF +M+ + + I S CA G + L ++ I
Sbjct: 281 WSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI 339
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 38/288 (13%)
Query: 235 AHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGR 294
++ LF N+ +N +I+GF+ L LF + GL + T V+ AC R
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 295 SARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAM 354
++ K G +H +++ + T+L+ +Y R+ A ++F+ + +R++V+W A+
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTAL 183
Query: 355 ILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXX 414
G+ G + + LF +MV M ++PD + +
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEMG--------------------VKPDSYFIVQVLSACV 223
Query: 415 XXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSR 474
G K M ++ K +F + NL A G +++A FD + +
Sbjct: 224 HVGDLDSGEWIVKYMEEMEMQKNSFVRT-TLVNLYAKCGKMEKARSV------FDSMVEK 276
Query: 475 ESMLWANLLALCRFRRDVYLGEQFAK----LLVDMYPKNLACYQFLLI 518
+ + W+ ++ Y F K L + M +NL QF ++
Sbjct: 277 DIVTWSTMI-------QGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 14/247 (5%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D +T+I Y + P + + L+ P+ ++ V + SC + G + G
Sbjct: 277 DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGI 336
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+ + ++ F + L + N+LI MYA CG + +F M +D+ N+ + G + G +
Sbjct: 337 SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVK 396
Query: 234 SAHALF------DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV-GLKGNATTMV 286
+ A+F + PD + T+ ++ G + A L+ F + V LK
Sbjct: 397 LSFAVFGQTEKLGISPDGS--TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYG 454
Query: 287 CVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR 346
C+V GR+ L + + I M R + I+ AL+ + +LA V + +
Sbjct: 455 CMVDLWGRAGMLDDAYRL---ICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI-- 509
Query: 347 NLVSWNA 353
L WNA
Sbjct: 510 ALEPWNA 516
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 189/425 (44%), Gaps = 56/425 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PNS T++ + +C + IV G++ HA + K G +S L ++++L+ MY+ CG ++ A +
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F+S D V+ +++ G + + A+
Sbjct: 314 FESTTEVD-------------------------------EVSMTVILVGLAQNGSEEEAI 342
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
+ F M G++ +A + V+ L G+ +H +I+ + ++ LI+MY
Sbjct: 343 QFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMY 402
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
KC + + VF RM RN VSWN+MI HG L L++EM ++
Sbjct: 403 SKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE--------- 453
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
++P +VTF+ + GR +M +V G++P H C+ +
Sbjct: 454 -----------VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIID 502
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
+L AGL+ EA+ + ++ + + +W LL C F D +GE A+ L P
Sbjct: 503 MLGRAGLLKEAKSFIDSLP-----LKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAP 557
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHE 567
+ + + + IY+ +W+ + K MK + G S +++++ H+F V +K H
Sbjct: 558 DSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHP 617
Query: 568 GIEAV 572
EA+
Sbjct: 618 QAEAI 622
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 96/233 (41%), Gaps = 29/233 (12%)
Query: 146 FFPNSYTFVPLIGSCGNTGCIVSGRKC-HAQVIKNG--FDSVLPVQNSLIHMYADCGDVQ 202
F N L+ CG G C HA +IKN F+ V D
Sbjct: 40 FLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPV---------------DAD 84
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
+ R L WNS++ Y + G L A LFD MP +++++ NI+ GFL+ R
Sbjct: 85 IHR--------NALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRE 136
Query: 263 PGYALKLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT 321
L + M GS G + T+ V++ C + +H I + +
Sbjct: 137 TESGFVLLKRMLGSGGF--DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGN 194
Query: 322 ALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
LI Y KC VF+ M++RN+++ A+I G + EDGL LF M
Sbjct: 195 KLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM 247
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 205/464 (44%), Gaps = 59/464 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D T+IS Y + P A Y + P+ T ++ +C G + +G + H
Sbjct: 362 DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH 421
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
IK S + V N+LI+MY+ C +D L+
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKC----------------------KCIDKALD----- 454
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+F +P KN+++W +I+G L+ N + +F + L+ NA T+ + AC
Sbjct: 455 ----IFHNIPRKNVISWTSIIAG-LRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACA 509
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
R L G+ +H ++R L AL+DMY +C R+ A F +++ SWN
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNI 568
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
++ G+ G + LFD MV R++PDE+TFI +
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVK--------------------SRVRPDEITFISLLCGC 608
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
G YF +M D +G+ PN H C+ +LL AG + EA K ++ M ++
Sbjct: 609 SKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP-----VT 662
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQ 533
+ +W LL CR + LGE A+ + ++ K++ Y L +YA +W V+ V+
Sbjct: 663 PDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVR 722
Query: 534 KLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMD 577
++MKE L + G S V++K VH F +K H + +N +++
Sbjct: 723 RMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 36/286 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKC 172
+ F N ++ Y K A Y R L P+ YTF ++ +CG + G++
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV 218
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H V++ G++ + V N+LI MY C GD+
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKC-------------------------------GDV 247
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
SA LFD MP +++++WN MISG+ + L+LF M + + + T+ V++AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
+ GR +H +I + + +L MY A ++F RM +++VSW
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVK-GEVEIDE--SPCADRG 395
MI G+ + P+ + + M+ D VK E+ + S CA G
Sbjct: 368 TMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSACATLG 412
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 22/269 (8%)
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKAR 261
+V + SM + + N+ + ++ G+L A +F M ++NL +WN+++ G+ K
Sbjct: 115 KVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG 174
Query: 262 NPGYALKLFREMGSVG-LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD 320
A+ L+ M VG +K + T CV+ CG L G+ VH ++R + +
Sbjct: 175 YFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV 234
Query: 321 TALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
ALI MY KC V+ A +F+RM R+++SWNAMI G+ +G +GL LF M G+
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS-- 292
Query: 381 KGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFA 440
+ PD +T + GR + G + +
Sbjct: 293 ------------------VDPDLMTLTSVISACELLGDRRLGRDIHAYVITT-GFAVDIS 333
Query: 441 HLWCMANLLANAGLVDEAEKCLRNMAKFD 469
+ + NAG EAEK M + D
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKD 362
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 102/244 (41%), Gaps = 31/244 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N +IS Y ++ H +F P+ T +I +C G GR H
Sbjct: 261 DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
A VI GF + V NSL MY L AG
Sbjct: 321 AYVITTGFAVDISVCNSLTQMY-------------------------------LNAGSWR 349
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
A LF M K++V+W MISG+ P A+ +R M +K + T+ V++AC
Sbjct: 350 EAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACA 409
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
L G +H I+ S +I+ LI+MY KC+ ++ A +F + +N++SW +
Sbjct: 410 TLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTS 469
Query: 354 MILG 357
+I G
Sbjct: 470 IIAG 473
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 15/226 (6%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
+A L++ S +D L IF N P T I A + ++ + + R ++
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFH--NIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Query: 144 FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKN--GFDSVLPVQNSLIHMYADCGDV 201
PN+ T + +C G ++ G++ HA V++ G D LP N+L+ MY CG +
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP--NALLDMYVRCGRM 549
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVM------PDKNLVTWNIMIS 255
A F+S +D+ SWN ++ GY E G S LFD M PD+ +T+ ++
Sbjct: 550 NTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDE--ITFISLLC 606
Query: 256 GFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEG 301
G K++ L F +M G+ N CVV GR+ L+E
Sbjct: 607 GCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEA 652
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
A+KL M + + + V +V C +EG V+ + S + L A +
Sbjct: 78 AMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLA 137
Query: 326 MYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVE 385
M+ + + A VF +M+ RNL SWN ++ G+ G ++ + L+ M+ + VK +V
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 386 IDESPCADR 394
PC R
Sbjct: 198 T--FPCVLR 204
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 207/440 (47%), Gaps = 39/440 (8%)
Query: 121 VISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKN- 179
++ Y KS ++ R F N T+ +IG I + Q++ N
Sbjct: 246 ILDVYAKSK----CIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 180 GFDSVLPVQNSLIHM-YADCGDVQVARVL----FDSMLARDLASWNSMVDGYLEAGDLSS 234
V PV LI M A GD+ R + + DL N+++ Y + G L
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCD 361
Query: 235 AHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGR 294
A F + K+++++N +I+G + P + +LF EM + G++ + TT++ V+TAC
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSH 421
Query: 295 SARLKEGRSVHG-SIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
A L G S HG ++ ++ ++ I + AL+DMY KC ++++A RVF+ M R++VSWN
Sbjct: 422 LAALGHGSSCHGYCVVHGYAVNTSICN-ALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNT 480
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
M+ G IHG ++ LSLF+ M + GV PDEVT + I
Sbjct: 481 MLFGFGIHGLGKEALSLFNSM-----------------QETGV---NPDEVTLLAILSAC 520
Query: 414 XXXXXXXXGRSYFKQMT-DVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
G+ F M+ F + P H CM +LLA AG +DEA + M F+ D+
Sbjct: 521 SHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM-PFEPDI 579
Query: 473 SRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTV 532
+ LL+ C ++ LG + +K + + + L Y+ A +WE+ + +
Sbjct: 580 R----VLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARI 634
Query: 533 QKLMKERRLGIIPGSSLVDL 552
+ + K+R L PG S VD+
Sbjct: 635 RMIQKKRGLLKTPGYSWVDV 654
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 32/263 (12%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
+ +I AY + A Y++ L P YT+ ++ +C I G+
Sbjct: 72 DLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK-------- 123
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
LIH + +C D A D+ ++VD Y + G+L A +
Sbjct: 124 ------------LIHSHVNCSD-----------FATDMYVCTALVDFYAKCGELEMAIKV 160
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV-GLKGNATTMVCVVTACGRSAR 297
FD MP +++V WN MISGF + LF +M + GL N +T+V + A GR+
Sbjct: 161 FDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGA 220
Query: 298 LKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILG 357
L+EG++VHG RM + L++ T ++D+Y K + + A RVF+ +N V+W+AMI G
Sbjct: 221 LREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGG 280
Query: 358 HCIHGSPEDGLSLFDEMVGMDKV 380
+ + ++ +F +M+ D V
Sbjct: 281 YVENEMIKEAGEVFFQMLVNDNV 303
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 30/227 (13%)
Query: 153 FVPLIGSCGNTGCIVSGRKCHAQVIKNGFD-SVLPVQNSLIHMYADCGDVQVARVLFDSM 211
F+ L+ +C + +V G+ H ++K S V +L +YA C +V++AR +FD +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
H P N + W++MI + AL L+
Sbjct: 62 -----------------------PH------PRINPIAWDLMIRAYASNDFAEKALDLYY 92
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
+M + G++ T V+ AC + +G+ +H + + + + TAL+D Y KC
Sbjct: 93 KMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG 152
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
+E+A +VF+ M R++V+WNAMI G +H D + LF +M +D
Sbjct: 153 ELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRID 199
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 203/444 (45%), Gaps = 30/444 (6%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGF--DSVLP-VQNSLIHMYADCGDVQVAR 205
+S T + L+ C N I ++ H +K G D P + N+L+ YA CG+V+ A
Sbjct: 431 DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAH 490
Query: 206 VLFDSMLAR-DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG 264
+F + R L S+NS++ GY+ +G A LF M +L TW++M+ + ++ P
Sbjct: 491 KIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPN 550
Query: 265 YALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
A+ +FRE+ + G++ N T++ ++ C + A L R HG IIR + L L+
Sbjct: 551 EAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRG-GLGDIRLKGTLL 609
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
D+Y KC ++ A VF+ R+LV + AM+ G+ +HG ++ L ++ M
Sbjct: 610 DVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMT--------- 660
Query: 385 EIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWC 444
ES ++PD V + G + + V G+KP C
Sbjct: 661 ---ES--------NIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYAC 709
Query: 445 MANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVD 504
+L+A G +D+A + M + + +W LL C + LG A L+
Sbjct: 710 AVDLIARGGRLDDAYSFVTQMP-----VEPNANIWGTLLRACTTYNRMDLGHSVANHLLQ 764
Query: 505 MYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEK 564
+ + + +YA A+WE V ++ LMK++ + G S +++ + F +
Sbjct: 765 AESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDC 824
Query: 565 RHEGIEAVNMMMDELARRFRMPSV 588
H +++ +++ L + + P V
Sbjct: 825 SHPRRDSIFDLVNALYLQMKEPVV 848
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 57/279 (20%)
Query: 138 YFRSLRF--RFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMY 195
+F+++ F P+S TF ++ C G +G+ H+ +IK G + V N+L+ MY
Sbjct: 108 FFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMY 167
Query: 196 ADCGDV-QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMI 254
A G + A FD + +D+ SWN+++ G+ E ++ A F +M
Sbjct: 168 AKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM------------ 215
Query: 255 SGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG---RSARLKEGRSVHGSII-R 310
+ P YA T+ V+ C ++ + GR +H ++ R
Sbjct: 216 --LKEPTEPNYA-----------------TIANVLPVCASMDKNIACRSGRQIHSYVVQR 256
Query: 311 MFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSL 370
+ ++ + + +L+ Y + R+E A +F RM +++LVSWN +I G+ + L
Sbjct: 257 SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Query: 371 FDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGI 409
F +V KG+V PD VT I I
Sbjct: 317 FHNLVH----KGDVS---------------PDSVTIISI 336
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 46/312 (14%)
Query: 114 DTFCVNTVISAYCKSHDPHLA-QVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D N VI+ Y + + A Q+F+ + P+S T + ++ C + SG++
Sbjct: 293 DLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEI 352
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H+ ++++ + L D + N+++ Y GD
Sbjct: 353 HSYILRHSY------------------------------LLEDTSVGNALISFYARFGDT 382
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
S+A+ F +M K++++WN ++ F + L L + + + ++ T++ ++ C
Sbjct: 383 SAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Query: 293 GRSARLKEGRSVHGSIIR---MFSRSSLILDTALIDMYCKCRRVELATRVFERMTN-RNL 348
+ + + VHG ++ + L AL+D Y KC VE A ++F ++ R L
Sbjct: 443 INVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTL 502
Query: 349 VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI---DESPCADR--GVVR----- 398
VS+N+++ G+ GS +D LF EM D + + ES C + GV R
Sbjct: 503 VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQAR 562
Query: 399 -LQPDEVTFIGI 409
++P+ VT + +
Sbjct: 563 GMRPNTVTIMNL 574
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG-L 278
NS+V YL G + A +LF M K+LV+WN++I+G+ A +LF + G +
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT----ALIDMYCKCRRVE 334
++ T++ ++ C + L G+ +H I+R S L+ DT ALI Y +
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILR---HSYLLEDTSVGNALISFYARFGDTS 383
Query: 335 LATRVFERMTNRNLVSWNAMI 355
A F M+ ++++SWNA++
Sbjct: 384 AAYWAFSLMSTKDIISWNAIL 404
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 17/230 (7%)
Query: 87 RTLLSRASNLCGV-------DFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYF 139
RTL+S S L G D +L L T+ + ++ Y +S P+ A + F
Sbjct: 500 RTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSL--MVRIYAESCCPNEA-IGVF 556
Query: 140 RSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADC 198
R ++ R PN+ T + L+ C + R+CH +I+ G + ++ +L+ +YA C
Sbjct: 557 REIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDI-RLKGTLLDVYAKC 615
Query: 199 GDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFL 258
G ++ A +F S RDL + +MV GY G A ++ M + N+ ++ I+ L
Sbjct: 616 GSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTML 675
Query: 259 KA-RNPGY---ALKLFREMGSV-GLKGNATTMVCVVTACGRSARLKEGRS 303
A + G L+++ + +V G+K C V R RL + S
Sbjct: 676 TACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYS 725
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 34/214 (15%)
Query: 146 FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
F + F+ ++ +C + + SGR H V K G + V S+++MYA C + +
Sbjct: 17 FGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQ 76
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
+F M + D P V WNI+++G L
Sbjct: 77 KMFRQMDSLD---------------------------P----VVWNIVLTG-LSVSCGRE 104
Query: 266 ALKLFREMGSVGL-KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
++ F+ M K ++ T V+ C R G+S+H II+ ++ AL+
Sbjct: 105 TMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALV 164
Query: 325 DMYCKCRRV-ELATRVFERMTNRNLVSWNAMILG 357
MY K + A F+ + ++++VSWNA+I G
Sbjct: 165 SMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 196/449 (43%), Gaps = 56/449 (12%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N IS P A + R PNS TF + +C + + G + H V++
Sbjct: 178 NAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR 237
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
+GFD+ + V N LI Y C ++ + ++F M ++ SW S+V Y++ + A L
Sbjct: 238 SGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 239 FDVMPDKNLV-TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSAR 297
+ + K++V T + MIS V++AC A
Sbjct: 298 Y-LRSRKDIVETSDFMISS-------------------------------VLSACAGMAG 325
Query: 298 LKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILG 357
L+ GRS+H ++ ++ + +AL+DMY KC +E + + F+ M +NLV+ N++I G
Sbjct: 326 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 385
Query: 358 HCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXX 417
+ G + L+LF+EM A RG P+ +TF+ +
Sbjct: 386 YAHQGQVDMALALFEEM-----------------APRG-CGPTPNYMTFVSLLSACSRAG 427
Query: 418 XXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESM 477
G F M +G++P H C+ ++L AG+V+ A + ++ M +
Sbjct: 428 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP-----IQPTIS 482
Query: 478 LWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMK 537
+W L CR LG A+ L + PK+ + L +A A +W +TV++ +K
Sbjct: 483 VWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELK 542
Query: 538 ERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
+ G S + +K VH F+ ++ H
Sbjct: 543 GVGIKKGAGYSWITVKNQVHAFQAKDRSH 571
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 32/289 (11%)
Query: 83 PFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSL 142
PFLA L++ S L + L+ R + ++IS ++ A V +F
Sbjct: 42 PFLANYLINMYSKLDHPESARLVLR-LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR 100
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
R PN +TF + + V+G++ HA +K G ++ ++ C
Sbjct: 101 REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG---------RILDVFVGC---- 147
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
S D Y + A LFD +P++NL TWN IS +
Sbjct: 148 ------------------SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
P A++ F E + N+ T + AC L G +HG ++R + + +
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLF 371
LID Y KC+++ + +F M +N VSW +++ + + E L+
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 298
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
N +++ Y + SA + + P +N+V+W +ISG + + AL F EM G+
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
N T C A G+ +H ++ + + + DMYCK R + A ++
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 165
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
F+ + RNL +WNA I G P + + F E +D
Sbjct: 166 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID 204
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 186/411 (45%), Gaps = 31/411 (7%)
Query: 142 LRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDV 201
R RF N ++ +I + G +VS R Q+ D N++I Y +
Sbjct: 273 FRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRM 328
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKAR 261
+ A LF M RD SWN MV GY G++ A F+ P+K+ V+WN +I+ + K +
Sbjct: 329 EDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 262 NPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT 321
+ A+ LF M G K + T+ +++A L+ G +H +++ + +
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHN 447
Query: 322 ALIDMYCKCRRVELATRVFERMT-NRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
ALI MY +C + + R+F+ M R +++WNAMI G+ HG+ + L+LF M K
Sbjct: 448 ALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSM----KS 503
Query: 381 KGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFA 440
G + P +TF+ + ++ F M V+ ++P
Sbjct: 504 NG----------------IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQME 547
Query: 441 HLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAK 500
H + N+ + G +EA + +M F+ D + +W LL CR +V L A+
Sbjct: 548 HYSSLVNVTSGQGQFEEAMYIITSMP-FEPDKT----VWGALLDACRIYNNVGLAHVAAE 602
Query: 501 LLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVD 551
+ + P++ Y L +YA W+ S V+ M+ +R+ GSS VD
Sbjct: 603 AMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 36/176 (20%)
Query: 199 GDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFL 258
G + AR +F+ + AR+ +WN+M+ GY++ +++ A LFDVMP +++VTWN MISG++
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 259 KARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLI 318
+CG L+E R + M SR S
Sbjct: 114 --------------------------------SCGGIRFLEEARKLFD---EMPSRDSFS 138
Query: 319 LDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+T +I Y K RR+ A +FE+M RN VSW+AMI G C +G + + LF +M
Sbjct: 139 WNT-MISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 20/279 (7%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
+T NT+IS Y K + + A+ F + R T + SCG + RK
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKL-FDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLF 128
Query: 174 AQV-IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
++ ++ F N++I YA + A +LF+ M R+ SW++M+ G+ + G++
Sbjct: 129 DEMPSRDSFS-----WNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEV 183
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV--GLKGNATTMVCVVT 290
SA LF MP K+ +++G +K A + + GS+ G + ++
Sbjct: 184 DSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIV 243
Query: 291 ACGRSARLKEGRSV-----------HGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
G+ +++ R + HG R +++ ++I Y K V A +
Sbjct: 244 GYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLL 303
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
F++M +R+ +SWN MI G+ ED +LF EM D
Sbjct: 304 FDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD 342
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 189/407 (46%), Gaps = 59/407 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN T+V ++ S G GC+ G+ H ++K + SLI
Sbjct: 202 PNLATYVCVLVSSGRVGCLSLGKGIHGLILK---------RASLI--------------- 237
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
L + N+++D Y++ LS A +F + K+ V+WN MISG + A+
Sbjct: 238 -------SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAI 290
Query: 268 KLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
LF M S G+K + + V++AC + GR VH I+ + + TA++DM
Sbjct: 291 DLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDM 350
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y KC +E A +F + ++N+ +WNA++ G IHG + L F+EMV +
Sbjct: 351 YAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG-------- 402
Query: 387 DESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQM-TDVFGLKPNFAHLWCM 445
+P+ VTF+ GR YF +M + + L P H CM
Sbjct: 403 ------------FKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCM 450
Query: 446 ANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVY-LGEQFAKLLVD 504
+LL AGL+DEA + ++ M + + + +L+ C+ R + L ++ +D
Sbjct: 451 IDLLCRAGLLDEALELVKAMP-----VKPDVRICGAILSACKNRGTLMELPKEILDSFLD 505
Query: 505 MYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVD 551
+ ++ Y L I+A +W++V+ +++LMK + + +PGSS ++
Sbjct: 506 IEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 146/315 (46%), Gaps = 43/315 (13%)
Query: 88 TLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF 147
T L ++++ ++ +I + L +F NT++S+Y P + Y + F
Sbjct: 46 TFLGKSADF--ASYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFS 103
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ +TF P+ +CG I G++ H V K GF + VQNSL+H Y CG+ +
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESR----- 158
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
+A +F MP +++V+W +I+GF + AL
Sbjct: 159 --------------------------NACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
F +M ++ N T VCV+ + GR L G+ +HG I++ S SL ALIDMY
Sbjct: 193 DTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILG--HCIHGSPEDGLSLFDEMVGMDKVKGEVE 385
KC ++ A RVF + ++ VSWN+MI G HC ++ + LF M +K +
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHC--ERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 386 IDE---SPCADRGVV 397
I S CA G V
Sbjct: 308 ILTSVLSACASLGAV 322
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 185 LPVQNSLIHMYADCGDVQVARVLFDSMLARDLAS----WNSMVDGYLEAGDLSS-----A 235
LP ++ L+ + + C ++V + + ++ RDL N +V ++ D +S
Sbjct: 3 LPEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVIL 62
Query: 236 HALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRS 295
H++ V+ ++N ++S + P + ++ S G + T V ACG+
Sbjct: 63 HSIRSVLSS---FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKF 119
Query: 296 ARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
+ ++EG+ +HG + +M + + +L+ Y C A +VF M R++VSW +I
Sbjct: 120 SGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGII 179
Query: 356 LGHCIHGSPEDGLSLFDEM 374
G G ++ L F +M
Sbjct: 180 TGFTRTGLYKEALDTFSKM 198
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 197/426 (46%), Gaps = 34/426 (7%)
Query: 162 NTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR--VLFDSMLARDLASW 219
N+ C++ + HAQ+ K G+ + + S + Y C +AR +L+ L+ + +
Sbjct: 45 NSKCVL---QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNI 101
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGS-VGL 278
N +++ ++ G+ A + D+N++TWN+MI G+++ ALK + M S +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATR 338
K N + + AC R L + VH +I + IL +AL+D+Y KC + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 339 VFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVR 398
VF + ++ WNAMI G HG + + +F EM E E
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM--------EAE------------H 261
Query: 399 LQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEA 458
+ PD +TF+G+ G+ YF M+ F ++P H M +LL AG V EA
Sbjct: 262 VSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEA 321
Query: 459 EKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLI 518
+ + +M + + ++W +LL+ R ++ LGE + L + Y L
Sbjct: 322 YELIESMP-----IEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGD---YVLLSN 373
Query: 519 IYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDE 578
IY+ +WE+ V++LM + + G S ++ ++H FK + H +A+ +++
Sbjct: 374 IYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEG 433
Query: 579 LARRFR 584
L ++ +
Sbjct: 434 LIQKTK 439
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN ++F + +C G + + H+ +I +G + + ++L+ +YA CGD+ +R +
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F S+ D++ WN+M+ G+ + H L A+
Sbjct: 223 FYSVKRNDVSIWNAMITGF-------ATHGL------------------------ATEAI 251
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS-RSSLILDTALIDM 326
++F EM + + ++ T + ++T C L+EG+ G + R FS + L A++D+
Sbjct: 252 RVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDL 311
Query: 327 YCKCRRVELATRVFERM-TNRNLVSWNAMILGHCIHGSPEDG 367
+ RV+ A + E M ++V W +++ + +PE G
Sbjct: 312 LGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELG 353
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 216/502 (43%), Gaps = 76/502 (15%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
++ L++ S V+ +F + D+ N +++ Y +Q+F F
Sbjct: 196 YVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY--------SQIFRFEDAL 247
Query: 144 FRFFP--------NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMY 195
F + +T ++ + +G I +GR H +K G S + V N+LI MY
Sbjct: 248 LVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMY 307
Query: 196 ADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMIS 255
++ A +F++M RDL +WNS++ + GD
Sbjct: 308 GKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDG--------------------- 346
Query: 256 GFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII--RMFS 313
L LF M G++ + T+ V+ CGR A L++GR +HG +I + +
Sbjct: 347 ----------TLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLN 396
Query: 314 R--SSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLF 371
R S+ + +L+DMY KC + A VF+ M ++ SWN MI G+ +
Sbjct: 397 RKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSC-------- 448
Query: 372 DEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTD 431
GE+ +D C R V+ PDE+TF+G+ GR++ QM
Sbjct: 449 ----------GELALDMFSCMCRAGVK--PDEITFVGLLQACSHSGFLNEGRNFLAQMET 496
Query: 432 VFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRD 491
V+ + P H C+ ++L A ++EA + + D ++W ++L+ CR +
Sbjct: 497 VYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICD-----NPVVWRSILSSCRLHGN 551
Query: 492 VYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVD 551
L K L ++ P++ Y + +Y A ++E V V+ M+++ + PG S +
Sbjct: 552 KDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIV 611
Query: 552 LKYIVHNFKVSEKRHEGIEAVN 573
LK VH F + H ++++
Sbjct: 612 LKNGVHTFFTGNQTHPEFKSIH 633
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 37/265 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSG-RK 171
D F N +IS + + P L + +R +R P+ YTF L+ G+ +S +K
Sbjct: 125 DVFGYNALISGFVVNGSP-LDAMETYREMRANGILPDKYTFPSLLK--GSDAMELSDVKK 181
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLAS-WNSMVDGYLEAG 230
H K GFDS V + L+ Y+ V+ A+ +FD + RD + WN++V+GY
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY---- 237
Query: 231 DLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
S + + AL +F +M G+ + T+ V++
Sbjct: 238 ------------------------SQIFRFED---ALLVFSKMREEGVGVSRHTITSVLS 270
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
A S + GRS+HG ++ S S +++ ALIDMY K + +E A +FE M R+L +
Sbjct: 271 AFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFT 330
Query: 351 WNAMILGHCIHGSPEDGLSLFDEMV 375
WN+++ H G + L+LF+ M+
Sbjct: 331 WNSVLCVHDYCGDHDGTLALFERML 355
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGF-DSVLPVQNSLIHMYADCGDVQVARVL 207
N T + + C VSG++ H +++ GF D SL++MYA CG ++ A ++
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F ++++ +N +ISGF+ +P A+
Sbjct: 119 FGG--------------------------------SERDVFGYNALISGFVVNGSPLDAM 146
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
+ +REM + G+ + T ++ + L + + VHG ++ S + + L+ Y
Sbjct: 147 ETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSY 205
Query: 328 CKCRRVELATRVFERMTNR-NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
K VE A +VF+ + +R + V WNA++ G+ ED L +F +M
Sbjct: 206 SKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKM 253
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 186/430 (43%), Gaps = 56/430 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN TF + +C + +V G + H V+ G + L V NS++ MY+ CG
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCG-------- 359
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
+L SA LF M +++++W+ +I G+ +A
Sbjct: 360 -----------------------NLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGF 396
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
K F M G K + +++ G A ++ GR VH + + + ++LI+MY
Sbjct: 397 KYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMY 456
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
KC ++ A+ +F ++VS AMI G+ HG ++ + LF++ +
Sbjct: 457 SKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK----------- 505
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
V +PD VTFI + G YF M + + ++P H CM +
Sbjct: 506 ---------VGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVD 556
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
LL AG + +AEK + M+ ++ ++W LL C+ + D+ G + A+ ++++ P
Sbjct: 557 LLCRAGRLSDAEKMINEMS-----WKKDDVVWTTLLIACKAKGDIERGRRAAERILELDP 611
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHE 567
L IY+ E + V+K MK + + PG S + +K V F ++ H
Sbjct: 612 TCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHP 671
Query: 568 GIEAVNMMMD 577
E + +++
Sbjct: 672 QSEDIYNILE 681
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 32/238 (13%)
Query: 138 YFRSL-RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYA 196
YF + R ++YTF + +C + G+ H VI GF + L V NSL MY
Sbjct: 196 YFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYT 255
Query: 197 DCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISG 256
+CG++Q LF++M RD+ SW S++ Y G A +
Sbjct: 256 ECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA------------------VET 297
Query: 257 FLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSS 316
F+K RN + N T + +AC +RL G +H +++ + S
Sbjct: 298 FIKMRNS-------------QVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS 344
Query: 317 LILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
L + +++ MY C + A+ +F+ M R+++SW+ +I G+C G E+G F M
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 30/293 (10%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV--G 277
NS + + AG+L +A +FD MP ++V+W +I ++ A N AL LF M V
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELAT 337
+ + + + V+ ACG+S+ + G S+H ++ SS+ + ++L+DMY + +++ +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVV 397
RVF M RN V+W A+I G G ++GL+ F EM +++
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL----------------- 206
Query: 398 RLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDE 457
D TF G++ + + F C+AN LA + E
Sbjct: 207 ---SDTYTFAIALKACAGLRQVKYGKAIHTHV-----IVRGFVTTLCVANSLAT--MYTE 256
Query: 458 AEKCLRNMAKFDGDMSRESMLWANLL-ALCRFRRDVYLGEQFAKLLVDMYPKN 509
+ + F+ R+ + W +L+ A R ++V E F K+ P N
Sbjct: 257 CGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPN 309
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 218/485 (44%), Gaps = 65/485 (13%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR---FFPNSYTFVPLIGSCG 161
IF P ++F +T+I +S PHL ++ ++ P+ TF LI +C
Sbjct: 69 IFDSIEIP-NSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACL 127
Query: 162 NTGCIVSGRKCHAQVIKNG-FDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWN 220
G++ H V+KNG F S VQ ++ +Y + ++L D
Sbjct: 128 KACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVE------DKLLLD----------- 170
Query: 221 SMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
A +FD +P ++V W+++++G+++ L++FREM GL+
Sbjct: 171 --------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDMYCKCRRVELATRV 339
+ ++ +TAC + L +G+ +H + + + S + + TAL+DMY KC +E A V
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRL 399
F+++T RN+ SW A+I G+ +G + ++ + + D +K
Sbjct: 277 FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIK------------------ 318
Query: 400 QPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAE 459
PD V +G+ GRS + M + + P H C+ +L+ AG +D+A
Sbjct: 319 -PDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 460 KCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLI- 518
+ M M + +W LL CR ++V LGE K L+D+ N+ + L+
Sbjct: 378 NLIEKMP-----MKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQ 432
Query: 519 ---IYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMM 575
IY + S V+ ++++R + PG S++++ V F + H + ++ +
Sbjct: 433 LSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTV 492
Query: 576 MDELA 580
+ L+
Sbjct: 493 IHLLS 497
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 212/488 (43%), Gaps = 82/488 (16%)
Query: 139 FRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYAD 197
FR LR N YTF ++ +C + G + H ++K+GF + + VQ++LI MYA
Sbjct: 215 FRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAK 274
Query: 198 CGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGF 257
C +++ AR L + M D+ SWNSM+ G + G + A ++F M ++++ + I
Sbjct: 275 CREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSI 334
Query: 258 LKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSL 317
L +AL +K S H I++ +
Sbjct: 335 LNC----FALS--------------------------RTEMKIASSAHCLIVKTGYATYK 364
Query: 318 ILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLF------ 371
+++ AL+DMY K ++ A +VFE M ++++SW A++ G+ +GS ++ L LF
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 372 ----DEMVGMDKVKGEVEID------------------ESPCADRGVVRLQP-------- 401
D++V + E+ S + +V +
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Query: 402 ----------DEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLAN 451
D +T+ + + YF M V+G+ P H CM +L
Sbjct: 485 NVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGR 544
Query: 452 AGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLA 511
+G + E+ L M ++ ++ +W +LA R ++ GE+ AK L+++ P N
Sbjct: 545 SGDFVKVEQLLHQM-----EVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAV 599
Query: 512 CYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEA 571
Y L +Y+ A + + + V++LMK R + PG S V+ K VH+F ++RH +
Sbjct: 600 PYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVE 659
Query: 572 VNMMMDEL 579
+ +DE+
Sbjct: 660 IYSKVDEM 667
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 137/295 (46%), Gaps = 33/295 (11%)
Query: 81 RIPFLARTLLSRASNLCGVDFTLLIFRYFNNPL-DTFCVNTVISAYCKSHDPHLAQVFYF 139
R F T++ SN + +FR +NP+ +T N +IS YCKS A ++
Sbjct: 57 RDEFTWNTMIVAYSNSRRLSDAEKLFR--SNPVKNTISWNALISGYCKSGSKVEAFNLFW 114
Query: 140 RSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCG 199
PN YT ++ C + ++ G + H IK GFD + V N L+ MYA C
Sbjct: 115 EMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCK 174
Query: 200 DVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLK 259
+ A LF++M +KN VTW M++G+ +
Sbjct: 175 RISEAEYLFETMEG------------------------------EKNNVTWTSMLTGYSQ 204
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
A++ FR++ G + N T V+TAC + + G VH I++ ++++ +
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 320 DTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ALIDMY KCR +E A + E M ++VSWN+MI+G G + LS+F M
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 185 LPVQ--NSLIHMYAD---------------CGDVQVARVLFDSMLARDLASWNSMVDGYL 227
LP++ S IH YAD G V AR +FD M RD +WN+M+ Y
Sbjct: 11 LPLKPFGSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 228 EAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVC 287
+ LS A LF P KN ++WN +ISG+ K+ + A LF EM S G+K N T+
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 288 VVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT-NR 346
V+ C L G +HG I+ + + L+ MY +C+R+ A +FE M +
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190
Query: 347 NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
N V+W +M+ G+ +G + F ++
Sbjct: 191 NNVTWTSMLTGYSQNGFAFKAIECFRDL 218
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 221/515 (42%), Gaps = 67/515 (13%)
Query: 46 PPFTRHHFQTLLQSSCQTPRHXXXXXXXXXXXXXXRIPFLARTLLSRASNLCGVDFTLLI 105
P +++H L S C++ ++ + LL +S +C + + L I
Sbjct: 4 PSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSI 62
Query: 106 FRYFNNPLDTFCVNTVISAYCKSHDP---HLAQVFYFRSLRFR---FFPNSYTFVPLIGS 159
R NP F NT+IS+ +H+ HLA Y + L R PN +T+ L +
Sbjct: 63 LRQIPNP-SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA 121
Query: 160 CG-NTGCIVSGRKCHAQVIK--NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDL 216
G + GR HA V+K + VQ +L+ YA+CG ++ AR
Sbjct: 122 SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREAR----------- 170
Query: 217 ASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV 276
+LF+ + + +L TWN +++ + + ++ +
Sbjct: 171 --------------------SLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM 210
Query: 277 GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELA 336
++ N ++V ++ +C G H +++ + + T+LID+Y KC + A
Sbjct: 211 QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFA 270
Query: 337 TRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGV 396
+VF+ M+ R++ +NAMI G +HG ++G+ L+ ++ +G+
Sbjct: 271 RKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLI-----------------SQGL 313
Query: 397 VRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVD 456
V PD TF+ G F M V+G++P H C+ +LL +G ++
Sbjct: 314 V---PDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLE 370
Query: 457 EAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFL 516
EAE+C++ M + + LW + L + D GE K L+ + +N Y L
Sbjct: 371 EAEECIKKMP-----VKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLL 425
Query: 517 LIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVD 551
IYA +W +V ++LMK+ R+ PG S ++
Sbjct: 426 SNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 213/482 (44%), Gaps = 61/482 (12%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRF-FPNSYTFVPLIGSCGNT 163
+F +NP + N++IS ++ A + Y R LR P+ YTF I +
Sbjct: 357 VFGRIHNP-NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEP 415
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV 223
V G+ H QV K G++ + V +L+ MY
Sbjct: 416 ERFVHGKLLHGQVTKLGYERSVFVGTTLLSMY---------------------------- 447
Query: 224 DGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
+ + SA +FDVM ++++V W MI G + N A++ F EM + +
Sbjct: 448 ---FKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
++ V+ AC A L++G H IR + + AL+DMY K + E A +F
Sbjct: 505 SLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLA 564
Query: 344 TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDE 403
+N +L WN+M+ + HG E LS F++++ + G PD
Sbjct: 565 SNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL-----------------ENG---FMPDA 604
Query: 404 VTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLR 463
VT++ + G+ + QM + G+K F H CM NL++ AGLVDEA + +
Sbjct: 605 VTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIE 663
Query: 464 NMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVA 523
+ ++ LW LL+ C R++ +G A+ ++ + P++ A + L +YAV
Sbjct: 664 QSPPGNN----QAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVN 719
Query: 524 AQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKV-SEKRHEGIEAVNMMMDELARR 582
+WE+V+ +++ ++ PG S +++ +N +V S E V+ DEL R
Sbjct: 720 GRWEDVAEMRRKIRGLASSKDPGLSWIEVNN--NNTQVFSSGDQSNPEVVSQAQDELNRL 777
Query: 583 FR 584
R
Sbjct: 778 KR 779
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 149/368 (40%), Gaps = 62/368 (16%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRF---FPNSYTFVPLIGSCGNTGCIVSGRKCHAQ 175
N + SAY S +P A + + F PNS TF L+ C ++ G ++Q
Sbjct: 167 NALYSAY--SRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQ 224
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSA 235
+IK G+ + VQ S++ MY+ CGD L SA
Sbjct: 225 IIKLGYSDNVVVQTSVLGMYSSCGD-------------------------------LESA 253
Query: 236 HALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRS 295
+FD + +++ V WN MI G LK L FR M G+ T V+ C +
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 296 ARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
G+ +H II S + L LD AL+DMYC C + A VF R+ N NLVSWN++I
Sbjct: 314 GSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSII 373
Query: 356 LGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXX 415
G +G E + ++ ++ M +P +PDE TF
Sbjct: 374 SGCSENGFGEQAMLMYRRLLRMS----------TP---------RPDEYTFSAAISATAE 414
Query: 416 XXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRE 475
G+ Q+T + + F ++ N EAE + FD R+
Sbjct: 415 PERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKN----REAESAQK---VFDVMKERD 467
Query: 476 SMLWANLL 483
+LW ++
Sbjct: 468 VVLWTEMI 475
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 23/252 (9%)
Query: 169 GRKCHAQVIKNG------FDSVLPVQNSLIHMYADCGDVQV---ARVLFDSMLARDLASW 219
G H+Q+IK G F + + +S++ + C + V AR + +L +
Sbjct: 69 GSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAA 128
Query: 220 -------NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP---GYALKL 269
N+++ Y+ G L A +FD MP +N+V++N + S + +RNP YA L
Sbjct: 129 TESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAY--SRNPDFASYAFPL 186
Query: 270 FREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCK 329
M +K N++T +V C + G S++ II++ ++++ T+++ MY
Sbjct: 187 TTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSS 246
Query: 330 CRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV--GMDKVKGEVEID 387
C +E A R+F+ + NR+ V+WN MI+G + EDGL F M+ G+D + I
Sbjct: 247 CGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIV 306
Query: 388 ESPCADRGVVRL 399
+ C+ G L
Sbjct: 307 LNGCSKLGSYSL 318
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 33/271 (12%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
IF NN D NT+I K+ +F+ L P +T+ ++ C G
Sbjct: 256 IFDCVNNR-DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
G+ HA++I + + LP+ N+L+ M
Sbjct: 315 SYSLGKLIHARIIVSDSLADLPLDNALLDM------------------------------ 344
Query: 225 GYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL-KGNAT 283
Y GD+ A +F + + NLV+WN +ISG + A+ ++R + + + +
Sbjct: 345 -YCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEY 403
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
T ++A R G+ +HG + ++ S+ + T L+ MY K R E A +VF+ M
Sbjct: 404 TFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVM 463
Query: 344 TNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
R++V W MI+GH G+ E + F EM
Sbjct: 464 KERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL-----KL--FRE 272
N+++ Y+ L A +FD MP +N+VT +S + + G +L KL F+
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTL-FGLSAVFEYVSMGSSLHSQIIKLGSFQM 84
Query: 273 MGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM---FSRSSLILDTALIDMYCK 329
+ + L A+++V + C LK R +H ++ + S + LI MY +
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 330 CRRVELATRVFERMTNRNLVSWNAM 354
C +E A +VF++M +RN+VS+NA+
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNAL 169
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 186/432 (43%), Gaps = 57/432 (13%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
+S+ F ++ +C + + G++ HA V K G +S + V L
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPL----------------- 326
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
VD Y++ SA F + + N V+W+ +ISG+ + A+K
Sbjct: 327 --------------VDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVK 372
Query: 269 LFREMGSVGLKG-NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
F+ + S N+ T + AC A G VH I+ S ++ALI MY
Sbjct: 373 TFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMY 432
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
KC ++ A VFE M N ++V+W A I GH +G+ + L LF++MV
Sbjct: 433 SKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS----------- 481
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
C ++P+ VTFI + G+ M + + P H CM +
Sbjct: 482 ---CG------MKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMID 532
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
+ A +GL+DEA K ++NM F+ D +M W L+ C +++ LGE + L + P
Sbjct: 533 IYARSGLLDEALKFMKNMP-FEPD----AMSWKCFLSGCWTHKNLELGEIAGEELRQLDP 587
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHE 567
++ A Y +Y A +WE + + KLM ER L S + K +H F V +K H
Sbjct: 588 EDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHP 647
Query: 568 GIEAVNMMMDEL 579
+ + + E
Sbjct: 648 QTQEIYEKLKEF 659
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 37/277 (13%)
Query: 106 FRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR--FFPNSYTFVPLIGSCGNT 163
F+ P D + +IS YC+ A V F+SLR + NS+T+ + +C
Sbjct: 343 FQEIREPNDV-SWSAIISGYCQMSQFEEA-VKTFKSLRSKNASILNSFTYTSIFQACSVL 400
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV 223
G + HA IK +++LI MY+ CG + A +F+SM D+ +W + +
Sbjct: 401 ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFI 460
Query: 224 DGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
G+ G N AL+LF +M S G+K N+
Sbjct: 461 SGHAYYG-------------------------------NASEALRLFEKMVSCGMKPNSV 489
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD-TALIDMYCKCRRVELATRVFER 342
T + V+TAC + +++G+ +++R ++ + I +ID+Y + ++ A + +
Sbjct: 490 TFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKN 549
Query: 343 MT-NRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
M + +SW + G H + E G +E+ +D
Sbjct: 550 MPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLD 586
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
N ++ Y E L A LFD M + N V+ MIS + + A+ LF M + G K
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
++ ++ + L GR +H +IR S+ ++T +++MY KC + A RV
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
F++M + V+ +++G+ G D L LF ++V
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 251 NIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIR 310
N+ + K R A + +EM G+ ++ + C+ AC L GR +H +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 311 MFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSL 370
S++L ++ MYC+CR +E A ++F+ M+ N VS MI + G + + L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 371 FDEMVG 376
F M+
Sbjct: 172 FSGMLA 177
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 179/413 (43%), Gaps = 60/413 (14%)
Query: 143 RFRFFPNSYTFVPLI---GSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCG 199
R R FP S V +I +C G I G++ H I + +D + V+N+LI MY+ C
Sbjct: 270 RMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCK 329
Query: 200 DVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLK 259
D++ A ++ F + +L TWN +ISG+ +
Sbjct: 330 DLRHALIV-------------------------------FRQTEENSLCTWNSIISGYAQ 358
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS-RSSLI 318
A L REM G + N+ T+ ++ C R A L+ G+ H I+R + +
Sbjct: 359 LNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM 418
Query: 319 LDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
L +L+D+Y K ++ A +V + M+ R+ V++ ++I G+ G L+LF EM
Sbjct: 419 LWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSG 478
Query: 379 KVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPN 438
++PD VT + + G F +M +G++P
Sbjct: 479 --------------------IKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPC 518
Query: 439 FAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQF 498
H CM +L AG + +A+ + NM WA LL C + +G+
Sbjct: 519 LQHFSCMVDLYGRAGFLAKAKDIIHNMP-----YKPSGATWATLLNACHIHGNTQIGKWA 573
Query: 499 AKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVD 551
A+ L++M P+N Y + +YA A W ++ V+ +M++ + PG + +D
Sbjct: 574 AEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWID 626
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 4/261 (1%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N +I++Y K+ Y R + P+++T+ ++ +CG T + GR H +
Sbjct: 113 NVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEV 172
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
+ + S L V N+LI MY ++ +AR LFD M RD SWN++++ Y G S A L
Sbjct: 173 SSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFEL 232
Query: 239 FDVM----PDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGR 294
FD M + +++TWNI+ G L+ N AL L M + + M+ + AC
Sbjct: 233 FDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSL 292
Query: 295 SARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAM 354
++ G+ +HG I + LI MY KC+ + A VF + +L +WN++
Sbjct: 293 IGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSI 352
Query: 355 ILGHCIHGSPEDGLSLFDEMV 375
I G+ E+ L EM+
Sbjct: 353 ISGYAQLNKSEEASHLLREML 373
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 31/224 (13%)
Query: 151 YTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDS 210
++ L+ +C + ++G + HA I +G + + S
Sbjct: 44 HSAASLLSACVDVRAFLAGVQVHAHCISSGVE-------------------------YHS 78
Query: 211 MLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLF 270
+L L ++ S + + EA + + +P WN++I+ + K + +
Sbjct: 79 VLVPKLVTFYSAFNLHNEAQSIIENSDILHPLP------WNVLIASYAKNELFEEVIAAY 132
Query: 271 REMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKC 330
+ M S G++ +A T V+ ACG + + GR VHGSI +SSL + ALI MY +
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRF 192
Query: 331 RRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
R + +A R+F+RM R+ VSWNA+I + G + LFD+M
Sbjct: 193 RNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 37/294 (12%)
Query: 88 TLLSRASNLCGVDFTLLIFRYFNNPLDTFCV-NTVISAYCKSHDPHLAQVFYFRSLRFRF 146
TL++ S + L++FR ++ C N++IS Y + + A L F
Sbjct: 320 TLITMYSKCKDLRHALIVFR--QTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF 377
Query: 147 FPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNG-FDSVLPVQNSLIHMYADCGDVQVAR 205
PNS T ++ C + G++ H +++ F + NSL+ +YA G + A+
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY 265
+ D M RD ++ S++DGY G+ G
Sbjct: 438 QVSDLMSKRDEVTYTSLIDGYGNQGE-------------------------------GGV 466
Query: 266 ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS-RSSLILDTALI 324
AL LF+EM G+K + T+V V++AC S + EG + + + R L + ++
Sbjct: 467 ALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMV 526
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHC-IHGSPEDGLSLFDEMVGM 377
D+Y + + A + M + + A +L C IHG+ + G ++++ M
Sbjct: 527 DLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEM 580
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 199/472 (42%), Gaps = 59/472 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + +I Y + + A + L + PN YT+ ++ SCGN I +G+ H
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
++K+GF+S L Q SL+ MY C S+VD L
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRC----------------------SLVDDSLR----- 323
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+F + N V+W +ISG ++ AL FR+M +K N+ T+ + C
Sbjct: 324 ----VFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCS 379
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
A +EGR +HG + + + LID+Y KC ++A VF+ ++ +++S N
Sbjct: 380 NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNT 439
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
MI + +G + L LF+ M+ + LQP++VT + +
Sbjct: 440 MIYSYAQNGFGREALDLFERMINLG--------------------LQPNDVTVLSVLLAC 479
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
G F + N H CM +LL AG ++EAE + D
Sbjct: 480 NNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAEMLTTEVINPD---- 534
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQ 533
+LW LL+ C+ R V + E+ + ++++ P + + +YA +W V ++
Sbjct: 535 --LVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMK 592
Query: 534 KLMKERRLGIIPGSSLVDLKYIVHNFKVSEK-RHEGIEAVNMMMDELARRFR 584
MK+ +L P S V++ H F + H E + ++EL ++ +
Sbjct: 593 SKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSK 644
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 40/271 (14%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIG 158
VD +L +F+ P + ++IS ++ +A + + + +R PNS+T +
Sbjct: 318 VDDSLRVFKCIEYP-NQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376
Query: 159 SCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLAS 218
C N GR+ H V K GFD + LI +Y CG +AR++FD++ D+ S
Sbjct: 377 GCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVIS 436
Query: 219 WNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL 278
N+M+ Y + +GF + AL LF M ++GL
Sbjct: 437 LNTMIYSYAQ--------------------------NGFGRE-----ALDLFERMINLGL 465
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD----TALIDMYCKCRRVE 334
+ N T++ V+ AC S ++EG + S F + ++L ++D+ + R+E
Sbjct: 466 QPNDVTVLSVLLACNNSRLVEEGCELFDS----FRKDKIMLTNDHYACMVDLLGRAGRLE 521
Query: 335 LATRVFERMTNRNLVSWNAMILGHCIHGSPE 365
A + + N +LV W ++ +H E
Sbjct: 522 EAEMLTTEVINPDLVLWRTLLSACKVHRKVE 552
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 96/193 (49%), Gaps = 21/193 (10%)
Query: 218 SWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG 277
S + +VD L+ GD+ A +FD M ++++VTWN +I+ +K R A++++R M +
Sbjct: 101 SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNN 160
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHG-SIIRMFSRSSLILDTALIDMYCKCRRVELA 336
+ + T+ V A + KE + HG ++I S++ + +AL+DMY K + A
Sbjct: 161 VLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREA 220
Query: 337 TRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGV 396
V +R+ +++V A+I+G+ G + + F M+ V
Sbjct: 221 KLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML--------------------V 260
Query: 397 VRLQPDEVTFIGI 409
++QP+E T+ +
Sbjct: 261 EKVQPNEYTYASV 273
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 175/407 (42%), Gaps = 61/407 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNG-FDSVLPVQNSLIHMYADCGDVQVARV 206
PN T ++ CG + GR H IK G +D+ V N+L+HMYA C + A+
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT--NVANALVHMYAKCYQNRDAKY 398
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
+F+ +D+ +WNS++ G+ + G + A
Sbjct: 399 VFEMESEKDIVAWNSIISGFSQNGSIHE-------------------------------A 427
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM--FSRSSLILDTALI 324
L LF M S + N T+ + +AC L G S+H +++ + SS+ + TAL+
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
D Y KC + A +F+ + +N ++W+AMI G+ G L LF+EM+ +
Sbjct: 488 DFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ----- 542
Query: 385 EIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWC 444
+P+E TF I G+ YF M + P+ H C
Sbjct: 543 ---------------KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTC 587
Query: 445 MANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVD 504
M ++LA AG +++A + M + + + L C LGE K ++D
Sbjct: 588 MVDMLARAGELEQALDIIEKMP-----IQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD 642
Query: 505 MYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVD 551
++P + + Y + +YA +W V+ LMK+R L I G S ++
Sbjct: 643 LHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 126/284 (44%), Gaps = 34/284 (11%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
+ C ++I+ Y K+ V + R N YT+ LI +C + G+ H
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
++K+G + + SL+ MY CGD+ AR +F+ DL W +M+ GY G ++
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
AL LF++M V +K N T+ V++ CG
Sbjct: 326 E-------------------------------ALSLFQKMKGVEIKPNCVTIASVLSGCG 354
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
L+ GRSVHG I++ + + + AL+ MY KC + A VFE + +++V+WN+
Sbjct: 355 LIENLELGRSVHGLSIKVGIWDTNVAN-ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 413
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE--SPCADRG 395
+I G +GS + L LF M V + S CA G
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 104 LIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNT 163
L+F P D + ++ YC + + Y ++ F + F + +C
Sbjct: 97 LVFDQIPEP-DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTEL 155
Query: 164 GCIVSGRKCHAQVIK-NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSM 222
+ +G+K H Q++K FD+V V L+ MYA CG+++
Sbjct: 156 QDLDNGKKIHCQLVKVPSFDNV--VLTGLLDMYAKCGEIK-------------------- 193
Query: 223 VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
SAH +F+ + +N+V W MI+G++K L LF M + GN
Sbjct: 194 -----------SAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE 242
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T ++ AC + + L +G+ HG +++ S L T+L+DMY KC + A RVF
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 343 MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
++ +LV W AMI+G+ +GS + LSLF +M G++
Sbjct: 303 HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N++IS + ++ H A + R PN T L +C + G + G H
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 174 AQVIKNGF--DSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
A +K GF S + V +L+ YA CGD Q
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQ----------------------------- 497
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
SA +FD + +KN +TW+ MI G+ K + +L+LF EM K N +T +++A
Sbjct: 498 --SARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Query: 292 CGRSARLKEGRSVHGSIIRMFSRS-SLILDTALIDMYCKCRRVELATRVFERM 343
CG + + EG+ S+ + ++ + S T ++DM + +E A + E+M
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKM 608
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKAR 261
Q VL + L D++ +V Y G A +FD +P+ + W +M+ + +
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 262 NPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT 321
+KL+ + G + + + AC L G+ +H ++++ S +++L T
Sbjct: 122 ESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-T 180
Query: 322 ALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
L+DMY KC ++ A +VF +T RN+V W +MI G+ + E+GL LF+ M
Sbjct: 181 GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM 233
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 223/549 (40%), Gaps = 95/549 (17%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
I R NN D N++I Y ++ A F+ + + + +I + G
Sbjct: 342 ILRQMNNA-DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLS 400
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
+++G + HA VIK+G+DS L V N+LI MY+ C F M +DL SW +++
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIA 460
Query: 225 GYLEAGDLSSAHALFDVMPDKNL------------------------------------- 247
GY + A LF + K +
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD 520
Query: 248 -VTWNIMISGFLKARNPGYA-------------------------------LKLFREMGS 275
V N ++ + K RN GYA ++LFR M
Sbjct: 521 TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
Query: 276 VGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVEL 335
GL ++ ++C+++A + L +GR +H ++R + A++DMY C ++
Sbjct: 581 TGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQS 640
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRG 395
A VF+R+ + L+ + +MI + +HG + + LFD+M +
Sbjct: 641 AKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN----------------- 683
Query: 396 VVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLV 455
+ PD ++F+ + GR + K M + L+P H C+ ++L A V
Sbjct: 684 ---VSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCV 740
Query: 456 DEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQF 515
EA + ++ M + +W LLA CR + +GE A+ L+++ PKN
Sbjct: 741 VEAFEFVKMM-----KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 795
Query: 516 LLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMM 575
+ ++A +W +V V+ MK + PG S +++ VH F +K H + +
Sbjct: 796 VSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEK 855
Query: 576 MDELARRFR 584
+ E+ R+
Sbjct: 856 LSEVTRKLE 864
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 33/274 (12%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVP-LIGSCGNTGCIVSGRKCH 173
F NT+I AY + +P A Y+ ++R P + P L+ +C I SG + H
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYW-NMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+ ++K G+ S + N+L+ MYA D+ AR LF DG+ E GD
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF---------------DGFQEKGD-- 248
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
V WN ++S + + L+LFREM G N+ T+V +TAC
Sbjct: 249 -------------AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 294 RSARLKEGRSVHGSIIRMFSRSS-LILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
+ K G+ +H S+++ + SS L + ALI MY +C ++ A R+ +M N ++V+WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
++I G+ + ++ L F +M+ EV +
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSM 389
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 126/286 (44%), Gaps = 39/286 (13%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRF-FPNSYTFVPLIGSCGNT 163
+F F D N+++S+Y S L + FR + PNSYT V + +C
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTS-GKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 297
Query: 164 GCIVSGRKCHAQVIKNG-FDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSM 222
G++ HA V+K+ S L V N+LI MY C
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC------------------------ 333
Query: 223 VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
G + A + M + ++VTWN +I G+++ AL+ F +M + G K +
Sbjct: 334 -------GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDE 386
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
+M ++ A GR + L G +H +I+ S+L + LIDMY KC R F R
Sbjct: 387 VSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLR 446
Query: 343 MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
M +++L+SW +I G+ + + L LF D K +EIDE
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFR-----DVAKKRMEIDE 487
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 152 TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLP-VQNSLIHMYADCGDVQVARVLFDS 210
F ++ CG + GR+ H+++ K L + L+ MY CG + A +FD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 211 MLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLF 270
M R +WN+M+ Y+ G+ +SA AL+ WN+ + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALY----------WNMRVEGV------------- 178
Query: 271 REMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKC 330
+GL ++ ++ AC + ++ G +H ++++ S+ + AL+ MY K
Sbjct: 179 ----PLGL----SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKN 230
Query: 331 RRVELATRVFERMTNR-NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ A R+F+ + + V WN+++ + G + L LF EM
Sbjct: 231 DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM 275
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 196/466 (42%), Gaps = 54/466 (11%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D +TVI+ Y ++ A + + + PN T + ++ +C + GRK H
Sbjct: 228 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH 287
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
I+ G ++ + V +L+ MY C + A +F + +D+ SW +++ G+ G
Sbjct: 288 ELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAH 347
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+ F +M +N + +A MV V+ +C
Sbjct: 348 RSIEEFSIMLLEN------------------------------NTRPDAILMVKVLGSCS 377
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
L++ + H +I+ S+ + +L+++Y +C + A++VF + ++ V W +
Sbjct: 378 ELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTS 437
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
+I G+ IHG L F+ MV +VK P+EVTF+ I
Sbjct: 438 LITGYGIHGKGTKALETFNHMVKSSEVK-------------------PNEVTFLSILSAC 478
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
G FK M + + L PN H + +LL G +D A + + M S
Sbjct: 479 SHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP-----FS 533
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQ 533
+ LL CR ++ + E AK L ++ + Y + +Y V +WENV ++
Sbjct: 534 PTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLR 593
Query: 534 KLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDEL 579
+K+R + SL++++ VH F ++ H E V ++ EL
Sbjct: 594 NSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
D L DL +S++ Y++ G + A +FD + ++VTW+ M+SGF K +P A++
Sbjct: 89 DVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVE 148
Query: 269 LFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
FR M + + + T++ +V+AC + + + GR VHG +IR + L L +L++ Y
Sbjct: 149 FFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCY 208
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
K R + A +F+ + ++++SW+ +I + +G+ + L +F++M+
Sbjct: 209 AKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMM 256
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 27/251 (10%)
Query: 235 AHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGR 294
A +F M ++L WN ++ + + L F M K + T+ + ACG
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 295 SARLKEGRSVHGSIIRMFSRSS-LILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
+ G +HG + + + S L + ++LI MY KC R+ A R+F+ + ++V+W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
M+ G +GSP + F MV V PD VT I +
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDV-------------------TPDRVTLITLVSAC 173
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
GR F ++ F++ + N L N A K N+ K +
Sbjct: 174 TKLSNSRLGRC-----VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE-- 226
Query: 474 RESMLWANLLA 484
++ + W+ ++A
Sbjct: 227 KDVISWSTVIA 237
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 196/449 (43%), Gaps = 63/449 (14%)
Query: 136 VFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHM 194
V F ++RF +PN TFV LI + I G K H IK GF S V NS I +
Sbjct: 357 VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL 416
Query: 195 YADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMI 254
YA ++ A+ F+ + R++ ++WN MI
Sbjct: 417 YAKFEALEDAKKAFEDITFREI-------------------------------ISWNAMI 445
Query: 255 SGFLKARNPGYALKLFREMGSVGLKGNAT-TMVCVVTACGRSARLKEGRSVHGSIIRMFS 313
SGF + ALK+F + + T V A +K+G+ H ++++
Sbjct: 446 SGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGL 505
Query: 314 RSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDE 373
S ++ +AL+DMY K ++ + +VF M+ +N W ++I + HG E ++LF +
Sbjct: 506 NSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHK 565
Query: 374 MVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVF 433
M+ + + PD VTF+ + G F M +V+
Sbjct: 566 MIKEN--------------------VAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVY 605
Query: 434 GLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVY 493
L+P+ H CM ++L AG + EAE+ + + G ESML ++L CR +V
Sbjct: 606 NLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPG----ESML-QSMLGSCRLHGNVK 660
Query: 494 LGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDL- 552
+G + A+L ++M P+ Y + IYA +W+ + ++K M+++ + G S +D+
Sbjct: 661 MGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVG 720
Query: 553 ----KYIVHNFKVSEKRHEGIEAVNMMMD 577
+ F +K H + + M++
Sbjct: 721 DTEGSLTMQGFSSGDKSHPKSDEIYRMVE 749
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 61/311 (19%)
Query: 100 DFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGS 159
D L IF +P D NT++S + D +A F R +++T+ +
Sbjct: 128 DNALCIFENLVDP-DVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSF 183
Query: 160 CGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASW 219
C + + G + + V+K G +S L V NS I M
Sbjct: 184 CVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITM------------------------- 218
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGY-ALKLFREMGSVGL 278
Y +G A +FD M K++++WN ++SG + G+ A+ +FR+M G+
Sbjct: 219 ------YSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV 272
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATR 338
+ + + V+T C LK R +HG I+ S L + L+ Y KC +E
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 339 VFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVR 398
VF +M+ RN+VSW M I + +D +S+F M + G
Sbjct: 333 VFHQMSERNVVSWTTM-----ISSNKDDAVSIFLNM----RFDG---------------- 367
Query: 399 LQPDEVTFIGI 409
+ P+EVTF+G+
Sbjct: 368 VYPNEVTFVGL 378
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 37/259 (14%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSL-RFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D N+++S + V FR + R + +F +I +C + + R+
Sbjct: 239 DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQI 298
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H IK G++S+L V N L+ Y+ CG ++ +
Sbjct: 299 HGLCIKRGYESLLEVGNILMSRYSKCGVLEAVK--------------------------- 331
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
++F M ++N+V+W MIS N A+ +F M G+ N T V ++ A
Sbjct: 332 ----SVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAV 382
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
+ ++KEG +HG I+ S + + I +Y K +E A + FE +T R ++SWN
Sbjct: 383 KCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWN 442
Query: 353 AMILGHCIHGSPEDGLSLF 371
AMI G +G + L +F
Sbjct: 443 AMISGFAQNGFSHEALKMF 461
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 39/252 (15%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPL---IGSCGNTGCIVSGRK 171
T +N IS + + P A + +L+ +F V L + +C G + G +
Sbjct: 40 TTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQ 97
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
H +GF S + V N+++ MY +AG
Sbjct: 98 IHGFSTTSGFTSFVCVSNAVMGMYR-------------------------------KAGR 126
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
+A +F+ + D ++V+WN ++SGF + AL M S G+ +A T ++
Sbjct: 127 FDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSF 183
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
C S G + ++++ S L++ + I MY + A RVF+ M+ ++++SW
Sbjct: 184 CVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISW 243
Query: 352 NAMILGHCIHGS 363
N+++ G G+
Sbjct: 244 NSLLSGLSQEGT 255
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 235 AHALFDVMPDKNLVT-WNIMISGFLKARNPGYALKLFRE---MGSVGLKGNATTMVCVVT 290
AH LFD +N T N IS L+ +P AL +F+E +G G + T+ +
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVS 350
AC LK G +HG S + + A++ MY K R + A +FE + + ++VS
Sbjct: 87 AC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 351 WNAMILG 357
WN ++ G
Sbjct: 145 WNTILSG 151
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 215/483 (44%), Gaps = 62/483 (12%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+F +P D N+++S Y +S + R FPN ++F + +C
Sbjct: 112 VFDEMPDP-DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLH 170
Query: 165 CIVSGRKCHAQVIKNGFD-SVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV 223
G H++++K G + + V N LI MY CG + A ++F M +D SWN++V
Sbjct: 171 LSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV 230
Query: 224 -------------------------------DGYLEAGDLSSAHALFDVMPDKNLVTWNI 252
D ++++GD ++A + MP+ N +WN
Sbjct: 231 ASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNT 290
Query: 253 MISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMF 312
+++G++ + G A + F +M S G++ + ++ V+ A A + G +H ++
Sbjct: 291 ILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLG 350
Query: 313 SRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFD 372
S +++ +ALIDMY KC ++ A +F M +NL+ WN MI G+ +G + + LF+
Sbjct: 351 LDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFN 410
Query: 373 EMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX-XXXXXXXXXGRSYFKQMTD 431
++ + L+PD TF+ + YF+ M +
Sbjct: 411 QL-------------------KQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMIN 451
Query: 432 VFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMA-KFDGDMSRESMLWANLLALCRFRR 490
+ +KP+ H + + G V +A++ ++ +DG + W LL C R+
Sbjct: 452 EYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDG------VAWRALLGACSARK 505
Query: 491 DVYLGEQFAKLLVDMYPKNLACYQFLLI--IYAVAAQWENVSTVQKLMKERRLGIIPGSS 548
D+ + A ++++ + Y ++++ +YA +W V ++K+M+E + GSS
Sbjct: 506 DLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSS 565
Query: 549 LVD 551
+D
Sbjct: 566 WID 568
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 32/241 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P++ V L+ GN G + R+ H V K+GF S + NSL+ Y ++ A +
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD M D+ SWNS+V GY+++G +
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQE-------------------------------GI 141
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDM 326
LF E+ + N + + AC R G +H ++++ + ++++ LIDM
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y KC ++ A VF+ M ++ VSWNA++ +G E GL F +M D V I
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELI 261
Query: 387 D 387
D
Sbjct: 262 D 262
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/327 (18%), Positives = 128/327 (39%), Gaps = 38/327 (11%)
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
+W+ ++ + + G L+ E+ + G K +A+ +V ++ G + R +HG +
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGL 368
+ S+ L +L+ Y +E A +VF+ M + +++SWN+++ G+ G ++G+
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 369 SLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQ 428
LF E+ D + P+E +F G +
Sbjct: 142 CLFLELHRSD--------------------VFPNEFSFTAALAACARLHLSPLGACIHSK 181
Query: 429 MTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRF 488
+ + K N C+ ++ G +D+A ++M + ++++ W ++A C
Sbjct: 182 LVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEE------KDTVSWNAIVASCSR 235
Query: 489 RRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSS 548
+ LG F M + Y L+ + + + N V L +P +
Sbjct: 236 NGKLELGLWF---FHQMPNPDTVTYNELIDAFVKSGDFNNAFQV--------LSDMPNPN 284
Query: 549 LVDLKYIVHNFKVSEKRHEGIEAVNMM 575
I+ + SEK E E M
Sbjct: 285 SSSWNTILTGYVNSEKSGEATEFFTKM 311
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 206/462 (44%), Gaps = 67/462 (14%)
Query: 103 LLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGN 162
LL+F F +P D F NT++ C + + + S + N TFV ++G+C
Sbjct: 64 LLVFPRFGHP-DKFLFNTLLK--CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACAR 120
Query: 163 TGCIVS---GRKCHAQVIKNGF--DSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA 217
+ + GR H V K GF +S L + +L+H YA GD++ AR +FD M R
Sbjct: 121 SASSSALRVGRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSV 179
Query: 218 SWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG 277
+WN+M+ GY D G AR + F GS G
Sbjct: 180 TWNAMIGGYCSHKD-----------------------KGNHNARKAMVLFRRFSCCGS-G 215
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM--FSRSSLILDTALIDMYCKCRRVEL 335
++ TTMVCV++A ++ L+ G VHG I ++ + + TAL+DMY KC +
Sbjct: 216 VRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNN 275
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRG 395
A VFE M +N+ +W +M G ++G + +L + M A+ G
Sbjct: 276 AFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM-----------------AESG 318
Query: 396 VVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLV 455
+ +P+E+TF + G FK M FG+ P H C+ +LL AG +
Sbjct: 319 I---KPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRI 375
Query: 456 DEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKN-----L 510
EA + + M + +++L +L C + +GE+ K L+++ ++
Sbjct: 376 QEAYQFILAMP-----IKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGS 430
Query: 511 ACYQFLLI--IYAVAAQWENVSTVQKLMKERRLGIIPGSSLV 550
C ++ + + A +W V ++K MKERR+ PG S V
Sbjct: 431 ECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 188/422 (44%), Gaps = 57/422 (13%)
Query: 118 VNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
+ +++S Y + D +A V++ ++ + ++ V ++ C + I G H I
Sbjct: 315 LTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAI 374
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
K+G + V N LI MY+ DV+ VLF
Sbjct: 375 KSGLCTKTLVVNGLITMYSKFDDVET--VLF----------------------------- 403
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMG-SVGLKGNATTMVCVVTACGRSA 296
LF+ + + L++WN +ISG +++ A ++F +M + GL +A T+ ++ C +
Sbjct: 404 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 463
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMIL 356
L G+ +HG +R + + TALIDMY KC A VF+ + +WN+MI
Sbjct: 464 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 357 GHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXX 416
G+ + G LS + EM + KG L+PDE+TF+G+
Sbjct: 524 GYSLSGLQHRALSCYLEM----REKG----------------LKPDEITFLGVLSACNHG 563
Query: 417 XXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRES 476
G+ F+ M FG+ P H M LL A L EA + M D+ +S
Sbjct: 564 GFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKM-----DIKPDS 618
Query: 477 MLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLM 536
+W LL+ C R++ +GE A+ + + KN Y + +YA A W++V V+ +M
Sbjct: 619 AVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMM 678
Query: 537 KE 538
K+
Sbjct: 679 KD 680
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 14/180 (7%)
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKAR 261
QV L S L R + S+++ YL+ G ++SA LFD MP+++ V WN +I G+ +R
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY--SR 128
Query: 262 NPGY---ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLI 318
N GY A KLF M G +ATT+V ++ CG+ + +GRSVHG + ++S L
Sbjct: 129 N-GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHG----VAAKSGLE 183
Query: 319 LDT----ALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
LD+ ALI Y KC + A +F M +++ VSWN MI + G E+ +++F M
Sbjct: 184 LDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 9/250 (3%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT N +I Y ++ A + L+ F P++ T V L+ CG G + GR H
Sbjct: 115 DTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVH 174
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
K+G + V+N+LI Y+ C ++ A VLF M + SWN+M+ Y ++G
Sbjct: 175 GVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQE 234
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK-LFREMGSVGLKGNATTMVCVVTAC 292
A +F M +KN+ + I L A L L + G V T++VC + C
Sbjct: 235 EAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRC 294
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
G L ++ S + S++ T+++ Y + +++A F + T + + +
Sbjct: 295 G---CLVSAERLYASA----KQDSIVGLTSIVSCYAEKGDMDIAVVYFSK-TRQLCMKID 346
Query: 353 AMILGHCIHG 362
A+ L +HG
Sbjct: 347 AVALVGILHG 356
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 125/298 (41%), Gaps = 37/298 (12%)
Query: 89 LLSRASNLCGVDFTLLIFRYFN-NPLDTFCVNTVISAYCKSHDPHLA-QVFYFRSLRFRF 146
L++ S V+ L +F PL ++ N+VIS +S A +VF+ L
Sbjct: 388 LITMYSKFDDVETVLFLFEQLQETPLISW--NSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 147 FPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV 206
P++ T L+ C C+ G++ H ++N F++ V +LI MYA CG+ A
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
+F S+ A A+WNSM+ GY +G L+ R A
Sbjct: 506 VFKSIKAPCTATWNSMISGYSLSG---------------------------LQHR----A 534
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
L + EM GLK + T + V++AC + EG+ ++I+ F S + AL+
Sbjct: 535 LSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVG 594
Query: 327 YC--KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
C E +++ + W A++ IH E G + +M +D G
Sbjct: 595 LLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNG 652
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 200/443 (45%), Gaps = 48/443 (10%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQV-- 176
N +I Y + D LA + R N+ T++ +I G I R+ ++
Sbjct: 116 NAMIGGYMSNGDAVLASGLFEEISVCR---NTVTWIEMIKGYGKRIEIEKARELFERMPF 172
Query: 177 -IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSA 235
+KN + + ++ +Y + ++ AR F+ + ++ W+ M+ GY GD+ A
Sbjct: 173 ELKN-----VKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEA 227
Query: 236 HALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRS 295
A+F + ++LV WN +I+G+ + A+ F M G + +A T+ +++AC +S
Sbjct: 228 RAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQS 287
Query: 296 ARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
RL GR VH I + + ALIDMY KC +E AT VFE ++ R++ N+MI
Sbjct: 288 GRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMI 347
Query: 356 LGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXX 415
IHG ++ L +F M +D L+PDE+TFI +
Sbjct: 348 SCLAIHGKGKEALEMFSTMESLD--------------------LKPDEITFIAVLTACVH 387
Query: 416 XXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRE 475
G F +M +KPN H C+ +LL +G + EA + ++ M D
Sbjct: 388 GGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPND---- 442
Query: 476 SMLWANLLALCRFRRDVYLGEQFAKL------LVDMYPKN-LACYQFLLIIYAVAAQWEN 528
+ LL C+ D + EQ K+ + + Y +N LA L YA +W+
Sbjct: 443 -TVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNL---YAHTERWQT 498
Query: 529 VSTVQKLMKERRLGIIPG-SSLV 550
++ M++R L PG SSLV
Sbjct: 499 AEALRVEMEKRGLEKSPGLSSLV 521
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 137/293 (46%), Gaps = 23/293 (7%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR--FFPNSYTFVPLI-GSCGNTGCIVS- 168
L F V+ +I + P A V Y +R R +FP +VPLI +C C+V
Sbjct: 9 LGEFHVSNLIKNHISRGSPIQALVLY-GGIRRRGVYFPG---WVPLILRACA---CVVPR 61
Query: 169 ---GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDG 225
G+ H++ IK G S + V +SLI MY CG V AR +FD M R++A+WN+M+ G
Sbjct: 62 VVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGG 121
Query: 226 YLEAGDLSSAHALF-DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
Y+ GD A LF ++ +N VTW MI G+ K A +LF M LK N
Sbjct: 122 YMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM-PFELK-NVKA 179
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
++ + ++++ R I + + + ++ Y + V A +F R+
Sbjct: 180 WSVMLGVYVNNRKMEDARKFFEDI----PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 345 NRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE--SPCADRG 395
R+LV WN +I G+ +G +D + F M G V + S CA G
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSG 288
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 200/442 (45%), Gaps = 31/442 (7%)
Query: 115 TFCV-NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
T CV NT+I +Y + + + + L PN+ TF LI + ++ + G H
Sbjct: 50 TKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALH 109
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
Q +K GF VQ S + Y + GD++ +R +FD +L + + NS++D G++
Sbjct: 110 GQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMD 169
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREM---GSVGLKGNATTMVCVVT 290
A F MP ++V+W +I+GF K AL +F EM + N T V V++
Sbjct: 170 YAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLS 229
Query: 291 ACGR--SARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL 348
+C ++ G+ +HG ++ + L TAL+DMY K +E+A +F+++ ++ +
Sbjct: 230 SCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKV 289
Query: 349 VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIG 408
+WNA+I +G P+ L +F+ M + P+ +T +
Sbjct: 290 CAWNAIISALASNGRPKQALEMFEMMKSS--------------------YVHPNGITLLA 329
Query: 409 IXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKF 468
I G F + + + P H C+ +L+ AGL+ +A ++++ F
Sbjct: 330 ILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL-PF 388
Query: 469 DGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWEN 528
+ D S + LL C+ + LG K L+ + P++ Y L A+ + W
Sbjct: 389 EPDAS----VLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSE 444
Query: 529 VSTVQKLMKERRLGIIPGSSLV 550
++K M E + IP S++
Sbjct: 445 AEKMRKAMIEAGIRKIPAYSVL 466
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 192/424 (45%), Gaps = 68/424 (16%)
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYL- 227
G+ H V+K ++S + +SLI MY+ G+V AR +F + +DL +N+M+ GY
Sbjct: 136 GKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYAN 195
Query: 228 -----EAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNP-------------GY---- 265
EA +L L + PD ++TWN +ISGF RN GY
Sbjct: 196 NSQADEALNLVKDMKLLGIKPD--VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDV 253
Query: 266 ------------------ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGS 307
A F++M + GL N+ T++ ++ AC A +K G+ +HG
Sbjct: 254 VSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGY 313
Query: 308 IIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDG 367
+ + +AL+DMY KC + A +F + + V++N+MI + HG +
Sbjct: 314 SVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKA 373
Query: 368 LSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFK 427
+ LFD+M + GE + D +TF I G++ F
Sbjct: 374 VELFDQM----EATGE----------------KLDHLTFTAILTACSHAGLTDLGQNLFL 413
Query: 428 QMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCR 487
M + + + P H CM +LL AG + EA + ++ M M + +W LLA CR
Sbjct: 414 LMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM-----RMEPDLFVWGALLAACR 468
Query: 488 FRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGS 547
++ L AK L ++ P+N L +YA A WE+V ++K++K++R GS
Sbjct: 469 NHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGS 528
Query: 548 SLVD 551
S V+
Sbjct: 529 SWVE 532
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 129/325 (39%), Gaps = 65/325 (20%)
Query: 143 RFRFFPNSY------TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYA 196
+ P+S+ ++V LI + G GR HA ++ +G + + L+ Y
Sbjct: 3 KLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYV 62
Query: 197 DCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISG 256
+CG V AR +FD MP +++ +MI
Sbjct: 63 ECGKVLDAR-------------------------------KVFDEMPKRDISGCVVMIGA 91
Query: 257 FLKARNPGY--ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSR 314
ARN Y +L FREM GLK +A + ++ A + G+ +H +++
Sbjct: 92 C--ARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 315 SSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
S + ++LIDMY K V A +VF + ++LV +NAMI G+ + ++ L+L +M
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 375 ----------------VGMDKVKGE---VEIDESPCADRGVVRLQPDEVTFIGIXXXXXX 415
G ++ E EI E C D +PD V++ I
Sbjct: 210 KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLD----GYKPDVVSWTSIISGLVH 265
Query: 416 XXXXXXGRSYFKQMTDVFGLKPNFA 440
FKQM GL PN A
Sbjct: 266 NFQNEKAFDAFKQML-THGLYPNSA 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D ++IS + A + + L +PNS T + L+ +C + G++ H
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIH 311
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+ G + V+++L+ MY CG + A +LF + ++NSM+ Y G
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLAD 371
Query: 234 SAHALFDVM 242
A LFD M
Sbjct: 372 KAVELFDQM 380
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 183/369 (49%), Gaps = 31/369 (8%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
+S++D Y + A + D M K++V+ + MISG A A+ +F M
Sbjct: 367 SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP-- 424
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHG-SIIRMFSRSSLILDTALIDMYCKCRRVELATR 338
NA T++ ++ AC SA L+ + HG +I R + + + + T+++D Y KC +E+A R
Sbjct: 425 -NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARR 483
Query: 339 VFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVR 398
F+++T +N++SW +I + I+G P+ L+LFDEM K KG
Sbjct: 484 TFDQITEKNIISWTVIISAYAINGLPDKALALFDEM----KQKG---------------- 523
Query: 399 LQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEA 458
P+ VT++ G FK M + KP+ H C+ ++L+ AG +D A
Sbjct: 524 YTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTA 582
Query: 459 EKCLRNMAKFDGDMSRESMLWANLLALC--RFRRDVYLGEQFAKLLVDMYPKNLACYQFL 516
+ ++N+ + D+ + W +L+ C RF++ + E A++L ++ P + Y
Sbjct: 583 VELIKNLPE---DVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL-ELEPLCSSGYLLA 638
Query: 517 LIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMM 576
+A WE+V+ +++L+KER++ ++ G S+V + F +K + +N ++
Sbjct: 639 SSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVV 698
Query: 577 DELARRFRM 585
L R ++
Sbjct: 699 QSLHRCMKL 707
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 131/256 (51%), Gaps = 42/256 (16%)
Query: 136 VFYFRSLR-FRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHM 194
+++F LR + F PN+ T V +I +C + G K H VI++GF + VQNS++ M
Sbjct: 112 LWWFSKLRVWGFEPNTSTLVLVIHACRSLW--FDGEKIHGYVIRSGFCGISSVQNSILCM 169
Query: 195 YADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMI 254
YAD D SA LFD M ++++++W+++I
Sbjct: 170 YAD--------------------------------SDSLSARKLFDEMSERDVISWSVVI 197
Query: 255 SGFLKARNPGYALKLFREM-GSVGLKGNATTMVCVVTACGRSARLKEGRSVHG-SIIRMF 312
+++++ P LKLF+EM + + T+ V+ AC + GRSVHG SI R F
Sbjct: 198 RSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGF 257
Query: 313 SRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFD 372
+ + + +LIDMY K V+ A RVF+ T RN+VSWN+++ G + ++ L +F
Sbjct: 258 DLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFH 317
Query: 373 EMVGMDKVKGEVEIDE 388
M V+ VE+DE
Sbjct: 318 LM-----VQEAVEVDE 328
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 33/263 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLA-QVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D + VI +Y +S +P + ++F + P+ T ++ +C I GR
Sbjct: 189 DVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSV 248
Query: 173 HAQVIKNGFD-SVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
H I+ GFD + + V NSLI MY+ DV A +FD R++ SWNS
Sbjct: 249 HGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNS---------- 298
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
+++GF+ + AL++F M ++ + T+V ++
Sbjct: 299 ---------------------ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRV 337
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
C + +S+HG IIR S+ + ++LID Y C V+ A V + MT +++VS
Sbjct: 338 CKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSC 397
Query: 352 NAMILGHCIHGSPEDGLSLFDEM 374
+ MI G G ++ +S+F M
Sbjct: 398 STMISGLAHAGRSDEAISIFCHM 420
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
NS+ D Y++ GDL S FD M ++ V+WN+++ G L L F ++ G +
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
N +T+V V+ AC RS +G +HG +IR + +++ MY + A ++
Sbjct: 125 PNTSTLVLVIHAC-RSLWF-DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKL 181
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
F+ M+ R+++SW+ +I + P GL LF EMV
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMV 217
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 145 RFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVA 204
R PN+ T + L+ +C + + + + H I+
Sbjct: 421 RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRR------------------------- 455
Query: 205 RVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG 264
S+ D++ S+VD Y + G + A FD + +KN+++W ++IS + P
Sbjct: 456 -----SLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPD 510
Query: 265 YALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
AL LF EM G NA T + ++AC +K+G + S++ + SL + ++
Sbjct: 511 KALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIV 570
Query: 325 DMYCKCRRVELATRVFERM---TNRNLVSWNAMILG 357
DM + ++ A + + + +W A++ G
Sbjct: 571 DMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 199/458 (43%), Gaps = 58/458 (12%)
Query: 83 PFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCV--NTVISAYCKSHDPHLAQVFYFR 140
PF L+ SN + + +F +++ N+++S + + + A +
Sbjct: 273 PFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQ 332
Query: 141 SLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGD 200
+ +SYT + C N + G + H+ V+ +G++ V + L+ ++A+ G+
Sbjct: 333 IYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGN 392
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKA 260
+Q AH LF +P+K+++ ++ +I G +K+
Sbjct: 393 IQ-------------------------------DAHKLFHRLPNKDIIAFSGLIRGCVKS 421
Query: 261 RNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD 320
A LFRE+ +GL + + ++ C A L G+ +HG I+ S +
Sbjct: 422 GFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA 481
Query: 321 TALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
TAL+DMY KC ++ +F+ M R++VSW +I+G +G E+ F +M+
Sbjct: 482 TALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN---- 537
Query: 381 KGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFA 440
+ ++P++VTF+G+ RS + M +GL+P
Sbjct: 538 ----------------IGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLE 581
Query: 441 HLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAK 500
H +C+ +LL AGL EA + + M + + +W +LL C ++ L A+
Sbjct: 582 HYYCVVDLLGQAGLFQEANELINKMP-----LEPDKTIWTSLLTACGTHKNAGLVTVIAE 636
Query: 501 LLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKE 538
L+ +P + + Y L YA W+ +S V++ K+
Sbjct: 637 KLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKK 674
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 5/264 (1%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSL-RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
T++S Y P+ A Y R L N + + ++ +CG G I G + ++
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
K + + NS++ MY G + A F +L SWN+++ GY +AG + A
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSAR 297
LF MP N+V+WN +ISGF+ +P AL+ M GL + + C + AC
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGL 253
Query: 298 LKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER---MTNRNLVSWNAM 354
L G+ +H +++ SS +ALIDMY C + A VF + N ++ WN+M
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 355 ILGHCIHGSPEDGLSLFDEMVGMD 378
+ G I+ E L L ++ D
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSD 337
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 160 CGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASW 219
CG G A VIK G + + N++I MY D + A +FD M R++ +W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWN-IMISGFLKA----RNPGYALKLFREMG 274
+MV GY G + A L+ M D N M S LKA + + ++ +G
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 275 SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVE 334
L+G+ M VV ++ RL E S I+R S S LI YCK ++
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSW----NTLISGYCKAGLMD 190
Query: 335 LATRVFERMTNRNLVSWNAMILGHCIHGSP 364
A +F RM N+VSWN +I G GSP
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKGSP 220
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
CG+ K G S+ +I+ ++ + +I MY R + A +VF+ M+ RN+V+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 352 NAMILGHCIHGSPEDGLSLFDEMV 375
M+ G+ G P + L+ M+
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRML 98
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 198/447 (44%), Gaps = 58/447 (12%)
Query: 139 FRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYAD 197
FR +RFR P+ TFV L+ + + + ++ H + K G + + ++LI +Y++
Sbjct: 442 FRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSN 501
Query: 198 CGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGF 257
C ++ +R++FD M K+LV WN M +G+
Sbjct: 502 CYCLKDSRLVFDE-------------------------------MKVKDLVIWNSMFAGY 530
Query: 258 LKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSL 317
++ AL LF E+ + + T +VTA G A ++ G+ H +++ +
Sbjct: 531 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 590
Query: 318 ILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGM 377
+ AL+DMY KC E A + F+ +R++V WN++I + HG + L + ++M+
Sbjct: 591 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM-- 648
Query: 378 DKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKP 437
G+ +P+ +TF+G+ G F+ M FG++P
Sbjct: 649 ---------------SEGI---EPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEP 689
Query: 438 NFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQ 497
H CM +LL AG +++A + + M +++W +LL+ C +V L E
Sbjct: 690 ETEHYVCMVSLLGRAGRLNKARELIEKMPT-----KPAAIVWRSLLSGCAKAGNVELAEH 744
Query: 498 FAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVH 557
A++ + PK+ + L IYA W V++ MK + PG S + + VH
Sbjct: 745 AAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVH 804
Query: 558 NFKVSEKRHEGIEAVNMMMDELARRFR 584
F +K H + ++D+L + R
Sbjct: 805 IFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 19/273 (6%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFP--NSYTFVPLIGSCGNTGCIVSGR 170
LDT+ N +I+ Y ++ + Y R + F P N ++ ++ +C + G
Sbjct: 77 LDTYLSNILINLYSRA-----GGMVYARKV-FEKMPERNLVSWSTMVSACNHHGIYEESL 130
Query: 171 KCHAQVIKNGFDSVLPVQNSLIHMYADCGDV---------QVARVLFDSMLARDLASWNS 221
+ + DS P + L C + Q+ L S RD+
Sbjct: 131 VVFLEFWRTRKDS--PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTL 188
Query: 222 MVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGN 281
++D YL+ G++ A +FD +P+K+ VTW MISG +K +L+LF ++ + +
Sbjct: 189 LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPD 248
Query: 282 ATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFE 341
+ V++AC L+ G+ +H I+R L LID Y KC RV A ++F
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 342 RMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
M N+N++SW ++ G+ + ++ + LF M
Sbjct: 309 GMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 125/279 (44%), Gaps = 35/279 (12%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIG 158
+D+ L+F T T+IS K +++ +++ + P+ Y ++
Sbjct: 199 IDYARLVFDALPEK-STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 159 SCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLAS 218
+C + G++ HA +++ G L D +
Sbjct: 258 ACSILPFLEGGKQIHAHILRYG-------------------------------LEMDASL 286
Query: 219 WNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL 278
N ++D Y++ G + +AH LF+ MP+KN+++W ++SG+ + A++LF M GL
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATR 338
K + ++T+C L G VH I+ + + +LIDMY KC + A +
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 339 VFERMTNRNLVSWNAMILGHCIHGSP---EDGLSLFDEM 374
VF+ ++V +NAMI G+ G+ + L++F +M
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 7/232 (3%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N++ + Y + + A + R P+ +TF ++ + GN + G++ H
Sbjct: 519 DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
Q++K G + + N+L+ MYA CG + A FDS +RD+ WNS++ Y G+
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGK 638
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKA-RNPGY---ALKLFREMGSVGLKGNATTMVCVV 289
A + + M + + I G L A + G LK F M G++ VC+V
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMV 698
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFE 341
+ GR+ RL + R + I +M ++ + I+ +L+ K VELA E
Sbjct: 699 SLLGRAGRLNKAREL---IEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAE 747
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 151/372 (40%), Gaps = 67/372 (18%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSL-RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
T++S Y K + H + F S+ +F P+ Y ++ SC + + G + HA I
Sbjct: 319 TTLLSGY-KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 178 KNGFDSVLPVQNSLIHMYA--DCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSA 235
K + V NSLI MYA DC L+ A
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDC---------------------------------LTDA 404
Query: 236 HALFDVMPDKNLVTWNIMISGFLKARNPGY---ALKLFREMGSVGLKGNATTMVCVVTAC 292
+FD+ ++V +N MI G+ + AL +FR+M ++ + T V ++ A
Sbjct: 405 RKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS 464
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
L + +HG + + + +ALID+Y C ++ + VF+ M ++LV WN
Sbjct: 465 ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWN 524
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX 412
+M G+ E+ L+LF E+ + R +PDE TF +
Sbjct: 525 SMFAGYVQQSENEEALNLFLEL--------------------QLSRERPDEFTFANMVTA 564
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
G+ + Q+ GL+ N + ++ A G ++A K FD
Sbjct: 565 AGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHKA------FDSAA 617
Query: 473 SRESMLWANLLA 484
SR+ + W ++++
Sbjct: 618 SRDVVCWNSVIS 629
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 48/229 (20%)
Query: 167 VSGRKCHAQVIK-NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDG 225
+ GR+ A++++ D +L QN ++H G + V + D+ L+ N +++
Sbjct: 41 IRGRREFARLLQLRASDDLLHYQN-VVH-----GQIIVWGLELDTYLS------NILINL 88
Query: 226 YLEAGDLSSAHALFDVMPDKNLVTWNIMISG----------------FLKARNPG---YA 266
Y AG + A +F+ MP++NLV+W+ M+S F + R Y
Sbjct: 89 YSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYI 148
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
L F + S GL G MV + +S +K G F R + + T LID
Sbjct: 149 LSSFIQACS-GLDGRGRWMVFQL----QSFLVKSG----------FDRD-VYVGTLLIDF 192
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
Y K ++ A VF+ + ++ V+W MI G G L LF +++
Sbjct: 193 YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 194/432 (44%), Gaps = 56/432 (12%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ TF ++ +C + GR+ HA + KN F S + ++LI +YA G +
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F S +D+ASW SM+D +++ L SA FD
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESA---FD--------------------------- 445
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
LFR++ S ++ T+ +++AC A L G + G I+ + + T+ I MY
Sbjct: 446 -LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMY 504
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
K + LA +VF + N ++ +++AMI HGS + L++F+ M K G
Sbjct: 505 AKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM----KTHG----- 555
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
++P++ F+G+ G YF+ M + + + PN H C+ +
Sbjct: 556 -----------IKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVD 604
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
LL G + +AE + + D ++ W LL+ CR +D +G++ A+ L+++ P
Sbjct: 605 LLGRTGRLSDAENLILSSGFQDHPVT-----WRALLSSCRVYKDSVIGKRVAERLMELEP 659
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHE 567
+ Y L IY + + V++LM++R + P S + + H+F V++ H
Sbjct: 660 EASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHP 719
Query: 568 GIEAVNMMMDEL 579
+ + M++ +
Sbjct: 720 SSQMIYTMLETM 731
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
+S + L + +G +V G+ H +IK+ + L + N+L++MY C ++ AR LF
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
D M R++ S+NS++ GY + G A L FL+AR L
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMEL------------------FLEAREANLKLD 147
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
F G++G CG L G +HG ++ + L LIDMY
Sbjct: 148 KFTYAGALGF-------------CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYS 194
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
KC +++ A +F+R R+ VSWN++I G+ G+ E+ L+L +M
Sbjct: 195 KCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM 240
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 34/242 (14%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N++IS Y + A + + + +T+ +G CG + G H V+
Sbjct: 117 NSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVV 176
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
NG + + N LI MY+ CG L A +L
Sbjct: 177 NGLSQQVFLINVLIDMYSKCGK-------------------------------LDQAMSL 205
Query: 239 FDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG---RS 295
FD +++ V+WN +ISG+++ L L +M GL + V+ AC
Sbjct: 206 FDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE 265
Query: 296 ARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
+++G ++H ++ +++ TAL+DMY K ++ A ++F M ++N+V++NAMI
Sbjct: 266 GFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMI 325
Query: 356 LG 357
G
Sbjct: 326 SG 327
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 201/464 (43%), Gaps = 41/464 (8%)
Query: 103 LLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPN---------SYTF 153
L+ N F N ++ Y P A Y + R F + S+T+
Sbjct: 65 FLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTY 124
Query: 154 VPLIGSCGNT--GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM 211
+ L+ + N ++ G H +K GF+S + VQ +L+ MY G++ A +FD M
Sbjct: 125 LFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEM 184
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
R+ +WN M+ G GD A + MP++ +V+W +I G+ + P A+ LF
Sbjct: 185 PERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFS 244
Query: 272 EMGSV-GLKGNATTMVCVVTACGRSARLKEGRSVHGSI-IRMFSRSSLILDTALIDMYCK 329
M + +K N T++ ++ A LK SVH + R F + + +LID Y K
Sbjct: 245 RMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAK 304
Query: 330 CRRVELATRVFERMTN--RNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
C ++ A + F + N +NLVSW MI IHG ++ +S+F +M +
Sbjct: 305 CGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLG--------- 355
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXX-XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
L+P+ VT I + +F M + + + P+ H C+
Sbjct: 356 -----------LKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLV 404
Query: 447 NLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMY 506
++L G ++EAEK + + ++++W LL C D L E+ + L+++
Sbjct: 405 DMLRRKGRLEEAEKI-----ALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELE 459
Query: 507 PKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLV 550
+ Y + I+ ++ + +K M R + +PG S V
Sbjct: 460 RSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 195/458 (42%), Gaps = 57/458 (12%)
Query: 125 YCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSV 184
+ ++ P ++ F + + P+ + SC GR H +K G+D+
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 185 LPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPD 244
+ V +SL+ MYA CG++ AR +FD M R++ +W+ M+ GY + G+
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEE---------- 200
Query: 245 KNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSV 304
AL LF+E L N + V++ C S L+ GR +
Sbjct: 201 ---------------------ALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQI 239
Query: 305 HGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSP 364
HG I+ SS + ++L+ +Y KC E A +VF + +NL WNAM+ + H
Sbjct: 240 HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHT 299
Query: 365 EDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRS 424
+ + LF M K+ G ++P+ +TF+ + GR
Sbjct: 300 QKVIELFKRM----KLSG----------------MKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 425 YFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLA 484
YF QM + ++P H + ++L AG + EA + + NM + +W LL
Sbjct: 340 YFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMP-----IDPTESVWGALLT 393
Query: 485 LCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGII 544
C ++ L A + ++ P + + L YA ++E+ + +KL+++R
Sbjct: 394 SCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKE 453
Query: 545 PGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDELARR 582
G S V+ + VH F E+RHE + + + EL
Sbjct: 454 TGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEE 491
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 31/218 (14%)
Query: 156 LIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARD 215
L+ S T + G + H V+K+G + V N+LI+ Y+ +++ FDS A
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK------SQLPFDSRRA-- 72
Query: 216 LASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGS 275
F+ P K+ TW+ +IS F + P +L+ ++M +
Sbjct: 73 -----------------------FEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMA 109
Query: 276 VGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVEL 335
L+ + + +C +R GRSVH ++ + + + ++L+DMY KC +
Sbjct: 110 GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY 169
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDE 373
A ++F+ M RN+V+W+ M+ G+ G E+ L LF E
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 186/436 (42%), Gaps = 55/436 (12%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+F +D +T+++ Y + LA + + N T + + + + G
Sbjct: 182 VFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLG 241
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
+ H IK G D L + +LI MY
Sbjct: 242 DLSGAESAHVLCIKIGLDLDLHLITALIGMYG---------------------------- 273
Query: 225 GYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
+ G +SSA +FD K++VTWN MI + K + L R+M +K N++T
Sbjct: 274 ---KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
V ++++C S GR+V + IL TAL+DMY K +E A +F RM
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK 390
Query: 345 NRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEV 404
++++ SW AMI G+ HG + ++LF++M +E C +++P+E+
Sbjct: 391 DKDVKSWTAMISGYGAHGLAREAVTLFNKM------------EEENC------KVRPNEI 432
Query: 405 TFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRN 464
TF+ + G FK+M + + P H C+ +LL AG ++EA + +RN
Sbjct: 433 TFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRN 492
Query: 465 MAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAA 524
+ ++ +S W LLA CR + LGE L +M + A L +AVA
Sbjct: 493 LP-----ITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG 547
Query: 525 QWENVSTVQKLMKERR 540
E S +L K R+
Sbjct: 548 NPEK-SLDNELNKGRK 562
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 143/333 (42%), Gaps = 55/333 (16%)
Query: 94 SNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFP-NSYT 152
S++ + + IF + +N + F NT+I Y S +P A F LR + + ++
Sbjct: 70 SSVLDIRYASSIFEHVSNT-NLFMFNTMIRGYSISDEPERA-FSVFNQLRAKGLTLDRFS 127
Query: 153 FVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM- 211
F+ + SC C+ G H +++GF ++N+LIH Y CG + AR +FD M
Sbjct: 128 FITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMP 187
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
+ D +++++++GYL+ S AL AL LFR
Sbjct: 188 QSVDAVTFSTLMNGYLQV----SKKAL---------------------------ALDLFR 216
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
M + N +T++ ++A L S H I++ L L TALI MY K
Sbjct: 217 IMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTG 276
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPC 391
+ A R+F+ +++V+WN MI + G E+ + L +M K E
Sbjct: 277 GISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQM------KYE-------- 322
Query: 392 ADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRS 424
+++P+ TF+G+ GR+
Sbjct: 323 ------KMKPNSSTFVGLLSSCAYSEAAFVGRT 349
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 199/435 (45%), Gaps = 40/435 (9%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DTF VN ++ +Y K + + A+ + PN ++ +I + G +
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCE----PNVVSWTSVISGYNDMGKPQNALSMF 118
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV-------LFDSMLARDLASWNSMVDGY 226
++ ++ V P + + ++ C + +R+ L S L R++ +S+VD Y
Sbjct: 119 QKMHED--RPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMY 176
Query: 227 LEAGDLSSAHALFDVMPD--KNLVTWNIMISGFLKARNPGYALKLFREMGS--VGLKGNA 282
+ D+ +A +FD M +N+V+W MI+ + + A++LFR + + N
Sbjct: 177 GKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQ 236
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
+ V++AC RL+ G+ HG + R S+ ++ T+L+DMY KC + A ++F R
Sbjct: 237 FMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLR 296
Query: 343 MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPD 402
+ +++S+ +MI+ HG E + LFDEMV R+ P+
Sbjct: 297 IRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAG--------------------RINPN 336
Query: 403 EVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCL 462
VT +G+ G Y M + +G+ P+ H C+ ++L G VDEA +
Sbjct: 337 YVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELA 396
Query: 463 RNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAV 522
+ + + + ++LW LL+ R V + + +K L+ + + Y L YAV
Sbjct: 397 KTI---EVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAV 453
Query: 523 AAQWENVSTVQKLMK 537
+ WE+ +++ MK
Sbjct: 454 SGGWEDSESLRLEMK 468
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 185 LPVQNSLIHMYADCGDVQVARVLFDSML----ARDLASWNSMVDGYLEAGDLSSAHALFD 240
L + L+H ++ + +L L A D + N +V Y++ ++++A LFD
Sbjct: 29 LKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFD 88
Query: 241 VMPDKNLVTWNIMISGFLKARNPGYALKLFREMGS-VGLKGNATTMVCVVTACGRSARLK 299
M + N+V+W +ISG+ P AL +F++M + N T V AC A +
Sbjct: 89 EMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESR 148
Query: 300 EGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT--NRNLVSWNAMILG 357
G+++H + R ++++ ++L+DMY KC VE A RVF+ M RN+VSW +MI
Sbjct: 149 IGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA 208
Query: 358 HCIHGSPEDGLSLF 371
+ + + + LF
Sbjct: 209 YAQNARGHEAIELF 222
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 183/438 (41%), Gaps = 62/438 (14%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
S F +I +C N G + H +IK GF V SLI YA+C + +R +F
Sbjct: 224 TSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVF 283
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
D + +A W ++SG+ + AL
Sbjct: 284 DEKVHEQVA-------------------------------VWTALLSGYSLNKKHEDALS 312
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
+F M + N +T + +C L G+ +HG +++ + + +L+ MY
Sbjct: 313 IFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYS 372
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
V A VF ++ +++VSWN++I+G HG + +F +M+ ++K
Sbjct: 373 DSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK--------- 423
Query: 389 SPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTD-VFGLKPNFAHLWCMAN 447
+PDE+TF G+ GR F M+ + + H CM +
Sbjct: 424 -----------EPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVD 472
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
+L G + EAE+ + M + M+W LL+ CR DV GE+ A + ++
Sbjct: 473 ILGRCGKLKEAEELIERMV-----VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS 527
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH- 566
K+ A Y L IYA A +W NVS ++ MK+ + PGSS V ++ H F ++ H
Sbjct: 528 KSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHC 587
Query: 567 ----EGIEAVNMMMDELA 580
E +E + + EL
Sbjct: 588 SRIYEKLEFLREKLKELG 605
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 93/177 (52%)
Query: 199 GDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFL 258
G V A LF M +D A+WNSMV GYL+ G + A LF MP KN+++W MI G
Sbjct: 142 GKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLD 201
Query: 259 KARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLI 318
+ G AL LF+ M +K + CV+TAC + G VHG II++
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 319 LDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+ +LI Y C+R+ + +VF+ + + W A++ G+ ++ ED LS+F M+
Sbjct: 262 VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGML 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKA 260
+ AR +F+ + + ++ + M+ GY + L A LFD MP +++V+WN MISG ++
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 261 RNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD 320
+ A+KLF EM + + + +V C RS ++ + R+F + + D
Sbjct: 111 GDMNTAVKLFDEMP----ERSVVSWTAMVNGCFRSGKVDQAE-------RLFYQMP-VKD 158
Query: 321 TA----LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
TA ++ Y + +V+ A ++F++M +N++SW MI G + + L LF M+
Sbjct: 159 TAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 9/212 (4%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
++S Y + A + LR PN TF + SC G + G++ H +K
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK 354
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHAL 238
G ++ V NSL+ MY+D G+V A +F + + + SWNS++ G + G A +
Sbjct: 355 LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 239 FDVMPDKNLVTWNIMISGFLKA------RNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
F M N I +G L A G L + G + C+V
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDIL 474
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
GR +LKE + I RM + + ++ AL+
Sbjct: 475 GRCGKLKEAEEL---IERMVVKPNEMVWLALL 503
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 184/433 (42%), Gaps = 58/433 (13%)
Query: 152 TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM 211
T+ L+ C G++ HAQ+ GF ++ L+ +YA GD+Q A +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGI----- 164
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
LF + ++L+ WN MISG+++ L ++
Sbjct: 165 --------------------------LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYY 198
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
+M + + T V AC RL+ G+ H +I+ +S++I+D+AL+DMY KC
Sbjct: 199 DMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS 258
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPC 391
RVF++++ RN+++W ++I G+ HG + L F++M E C
Sbjct: 259 SFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKM------------KEEGC 306
Query: 392 ADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLAN 451
+P+ VTF+ + G +F M +G++P H M + L
Sbjct: 307 --------RPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGR 358
Query: 452 AGLVDEA-EKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNL 510
AG + EA E +++ K +W +LL CR +V L E A +++ P N
Sbjct: 359 AGRLQEAYEFVMKSPCK------EHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNG 412
Query: 511 ACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIE 570
Y YA E S V++ M+ + PG S ++L+ VH F + H E
Sbjct: 413 GNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSE 472
Query: 571 AVNMMMDELARRF 583
+ + E+ F
Sbjct: 473 KIYKKVHEMTSFF 485
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 11/226 (4%)
Query: 81 RIPFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFR 140
++ L LS G+ F L R D N +IS Y + Y+
Sbjct: 146 KVKLLILYALSGDLQTAGILFRSLKIR------DLIPWNAMISGYVQKGLEQEGLFIYYD 199
Query: 141 SLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGD 200
+ R P+ YTF + +C + G++ HA +IK S + V ++L+ MY C
Sbjct: 200 MRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSS 259
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISG 256
+FD + R++ +W S++ GY G +S F+ M ++ N VT+ ++++
Sbjct: 260 FSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTA 319
Query: 257 FLKARNPGYALKLFREMG-SVGLKGNATTMVCVVTACGRSARLKEG 301
+ F M G++ +V GR+ RL+E
Sbjct: 320 CNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 163/355 (45%), Gaps = 54/355 (15%)
Query: 101 FTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSC 160
+T LIF P + F VN++ + K + Y + R P++++F +I S
Sbjct: 58 YTRLIFDSVTFP-NVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA 116
Query: 161 GNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWN 220
G G + A V K GF V+N ++ MY V+ AR +FD + R + WN
Sbjct: 117 GRFGILF-----QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWN 171
Query: 221 SMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN------------------ 262
M+ GY + G+ A LFD+MP+ ++V+W +MI+GF K ++
Sbjct: 172 VMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVS 231
Query: 263 -----PGY--------ALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII 309
GY AL+LF +M +G++ N TT V V++AC A RS+ I
Sbjct: 232 WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLID 291
Query: 310 RMFSRSSLILDTALIDMYCKCRRVELATRVFERM-TNRNLVSWNAMILGHCIHGSPEDGL 368
R + + TAL+DM+ KCR ++ A R+F + T RNLV+WNAMI G+ G
Sbjct: 292 EKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSAR 351
Query: 369 SLFDEMVGMDKVKGEVEIDESPCADRGVVRL--------------QPDEVTFIGI 409
LFD M + V I + A G L +PDEVT I +
Sbjct: 352 QLFDTMPKRNVVSWNSLI--AGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISV 404
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 153/333 (45%), Gaps = 35/333 (10%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N ++S Y ++ A + LR PN T+V +I +C R + +
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM-LARDLASWNSMVDGYLEAGDLSSAHA 237
V+ +L+ M+A C D+Q AR +F+ + R+L +WN+M+ GY GD+SSA
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG-LKGNATTMVCVVTACGRSA 296
LFD MP +N+V+WN +I+G+ A++ F +M G K + TM+ V++ACG A
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDT----ALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
L+ G I+ ++ + L+ +LI MY + + A RVF+ M R++VS+N
Sbjct: 413 DLELG----DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYN 468
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXX 412
+ +G + L+L +M D G+ +PD VT+ +
Sbjct: 469 TLFTAFAANGDGVETLNLLSKM-----------------KDEGI---EPDRVTYTSVLTA 508
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCM 445
G+ FK + + P H CM
Sbjct: 509 CNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 178/403 (44%), Gaps = 56/403 (13%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ T ++ C + + G++ H ++ G D + + ++L++MY+ CG +++AR +
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
+D + D S +S++ GY + G ++ GFL
Sbjct: 609 YDRLPELDPVSCSSLISGYSQHG---------------------LIQDGFL--------- 638
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
LFR+M G ++ + ++ A S G VH I ++ + + ++L+ MY
Sbjct: 639 -LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMY 697
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
K ++ + F ++ +L++W A+I + HG + L +++ M K KG
Sbjct: 698 SKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLM----KEKG----- 748
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
+PD+VTF+G+ + M +G++P H CM +
Sbjct: 749 -----------FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVD 797
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
L +G + EAE + NM + ++++W LLA C+ +V LG+ AK +++ P
Sbjct: 798 ALGRSGRLREAESFINNM-----HIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEP 852
Query: 508 KNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLV 550
+ Y L I A +W+ V +KLMK + PG S V
Sbjct: 853 SDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 34/291 (11%)
Query: 85 LARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRF 144
+A L+S S +D + +F ++ VN +I+++ +S P A + R L+
Sbjct: 388 VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 145 RFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVA 204
+ ++ L+ C+ G++ H +K+G L V +SL +Y+ C
Sbjct: 448 GLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKC------ 498
Query: 205 RVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG 264
G L ++ LF +P K+ W MISGF +
Sbjct: 499 -------------------------GSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR 533
Query: 265 YALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
A+ LF EM G + +T+ V+T C L G+ +HG +R + L +AL+
Sbjct: 534 EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALV 593
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+MY KC ++LA +V++R+ + VS +++I G+ HG +DG LF +MV
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 137/280 (48%), Gaps = 49/280 (17%)
Query: 106 FRYFNNPL--DTFCVNTVISAYCKSHD-PHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGN 162
++ F + L + +C NT+I+ ++ + + +F+ + F+ P+SYT+ ++ +C +
Sbjct: 205 YKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK-PDSYTYSSVLAACAS 263
Query: 163 TGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSM 222
+ G+ A+VIK CG A D+ ++
Sbjct: 264 LEKLRFGKVVQARVIK-------------------CG-------------AEDVFVCTAI 291
Query: 223 VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
VD Y + G ++ A +F +P+ ++V+W +M+SG+ K+ + AL++F+EM G++ N
Sbjct: 292 VDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINN 351
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT----ALIDMYCKCRRVELATR 338
T+ V++ACGR + + E VH + +S LD+ ALI MY K ++L+ +
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVF----KSGFYLDSSVAAALISMYSKSGDIDLSEQ 407
Query: 339 VFERMTN---RNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
VFE + + +N+V N MI P + LF M+
Sbjct: 408 VFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRML 445
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 48/278 (17%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFP-NSYTFVPLIGSCGNT 163
+F NP ++S Y KS+D + + F+ +R N+ T +I +CG
Sbjct: 307 VFSRIPNP-SVVSWTVMLSGYTKSNDA-FSALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMV 223
+ + HA V K+GF V +LI MY+ GD+ ++ +F+ +
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL------------ 412
Query: 224 DGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
D + +N+V N+MI+ F +++ PG A++LF M GL+ +
Sbjct: 413 ----------------DDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEF 454
Query: 284 TMVCVVTA--CGRSARLKEGRSVHGSIIRMFSRSSLILD----TALIDMYCKCRRVELAT 337
++ +++ C L G+ VHG + +S L+LD ++L +Y KC +E +
Sbjct: 455 SVCSLLSVLDC-----LNLGKQVHGYTL----KSGLVLDLTVGSSLFTLYSKCGSLEESY 505
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
++F+ + ++ W +MI G +G + + LF EM+
Sbjct: 506 KLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML 543
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 120/292 (41%), Gaps = 35/292 (11%)
Query: 84 FLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLR 143
FL ++LLS SN + +F P D N +IS Y K H + +F +
Sbjct: 85 FLTKSLLSWYSNSGSMADAAKLFDTIPQP-DVVSCNIMISGY-KQHRLFEESLRFFSKMH 142
Query: 144 FRFF-PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
F F N ++ +I +C + IK G+ V+++LI DV
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALI-------DVF 195
Query: 203 VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN 262
+ F+ A+ +F N+ WN +I+G L+ +N
Sbjct: 196 SKNLRFED------------------------AYKVFRDSLSANVYCWNTIIAGALRNQN 231
Query: 263 PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA 322
G LF EM K ++ T V+ AC +L+ G+ V +I+ + + TA
Sbjct: 232 YGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVC-TA 290
Query: 323 LIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
++D+Y KC + A VF R+ N ++VSW M+ G+ L +F EM
Sbjct: 291 IVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD L + L SW Y +G ++ A LFD +P ++V+ NIMISG+ + R +L
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
+ F +M +G + N + V++AC V I+M ++++ALID++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM-VGMDK 379
K R E A +VF + N+ WN +I G + + LF EM VG K
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 172/400 (43%), Gaps = 55/400 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N + Y + D + A Y P+S T V ++ +C G +
Sbjct: 466 DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVY 525
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
Q+IK+GFDS V ++LI+M+ C + A VLFD G+
Sbjct: 526 GQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKC-------------GF------- 565
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+K+ V+WNIM++G+L A+ FR+M + NA T V +V A
Sbjct: 566 ----------EKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAA 615
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
+ L+ G SVH S+I+ S + +L+DMY KC +E + + F ++N+ +VSWN
Sbjct: 616 ELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNT 675
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
M+ + HG +SLF + + E+ L+PD V+F+ +
Sbjct: 676 MLSAYAAHGLASCAVSLF------------LSMQEN--------ELKPDSVSFLSVLSAC 715
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
G+ F++M + ++ H CM +LL AGL EA + +R M +
Sbjct: 716 RHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRM-----RVK 770
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACY 513
+W LL R +++L LV + P N + Y
Sbjct: 771 TSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY 810
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 138/351 (39%), Gaps = 55/351 (15%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSL-RFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D + +I++Y + H + FR + R PN+ T ++ C G+
Sbjct: 365 DVVSWSAMIASY-EQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI 423
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H IK +S L ++I MYA CG
Sbjct: 424 HCYAIKADIESELETATAVISMYAKCGR-------------------------------F 452
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
S A F+ +P K+ V +N + G+ + + A +++ M G+ ++ TMV ++ C
Sbjct: 453 SPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT-NRNLVSW 351
+ G V+G II+ S + ALI+M+ KC + A +F++ ++ VSW
Sbjct: 513 AFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSW 572
Query: 352 NAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXX 411
N M+ G+ +HG E+ ++ F +M V + QP+ VTF+ I
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQM--------------------KVEKFQPNAVTFVNIVR 612
Query: 412 XXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCL 462
G S + G + ++ A G+++ +EKC
Sbjct: 613 AAAELSALRVGMSVHSSLIQC-GFCSQTPVGNSLVDMYAKCGMIESSEKCF 662
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 31/212 (14%)
Query: 163 TGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSM 222
G +V G H ++ G + V SL+ MY+ CG++++
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEI------------------- 353
Query: 223 VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
A LF + D+++V+W+ MI+ + +A A+ LFR+M + +K NA
Sbjct: 354 ------------AEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T+ V+ C A + G+S+H I+ S L TA+I MY KC R A + FER
Sbjct: 402 VTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFER 461
Query: 343 MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ ++ V++NA+ G+ G ++ M
Sbjct: 462 LPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 127/290 (43%), Gaps = 47/290 (16%)
Query: 100 DFTLLIFRYFNNPLDTFCVNTVISAYCKS--HDPHLAQVFYFRSLRFRFFPNSYTFVPLI 157
D + +IF +P N++I Y ++ H L F + S P+ Y+F +
Sbjct: 50 DLSRVIFDSVRDP-GVVLWNSMIRGYTRAGLHREALG-FFGYMSEEKGIDPDKYSFTFAL 107
Query: 158 GSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA 217
+C + G + H + + G +S + + +L+ MY
Sbjct: 108 KACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYC--------------------- 146
Query: 218 SWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVG 277
+A DL SA +FD M K++VTWN M+SG + AL LF +M S
Sbjct: 147 ----------KARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCC 196
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIR---MFSRSSLILDTALIDMYCKCRRVE 334
+ + ++ ++ A + + R +HG +I+ +F+ SS LIDMYC C +
Sbjct: 197 VDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSS-----GLIDMYCNCADLY 251
Query: 335 LATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM----VGMDKV 380
A VFE + ++ SW M+ + +G E+ L LFD M V M+KV
Sbjct: 252 AAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKV 301
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 185 LPVQ-NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGY--LEAGDLSSAHALFDV 241
+P+ +L+ M +C + + + S++ L N +++ Y + DLS +FD
Sbjct: 1 MPINYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLS--RVIFDS 58
Query: 242 MPDKNLVTWNIMISGFLKARNPGYALKLFREMGS-VGLKGNATTMVCVVTACGRSARLKE 300
+ D +V WN MI G+ +A AL F M G+ + + + AC S K+
Sbjct: 59 VRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKK 118
Query: 301 GRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCI 360
G +H I M S + + TAL++MYCK R + A +VF++M +++V+WN M+ G
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQ 178
Query: 361 HGSPEDGLSLFDEM 374
+G L LF +M
Sbjct: 179 NGCSSAALLLFHDM 192
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 170 RKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEA 229
R H VIK GF + + LI MY +C D+ A +F+ + +D +SW +M+ Y
Sbjct: 221 RCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHN 278
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
G LFD+M + ++ + N +
Sbjct: 279 GFFEEVLELFDLMRNYDV-------------------------------RMNKVAAASAL 307
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLV 349
A L +G ++H ++ + + T+L+ MY KC +E+A ++F + +R++V
Sbjct: 308 QAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVV 367
Query: 350 SWNAMILGHCIHGSPEDGLSLFDEMV 375
SW+AMI + G ++ +SLF +M+
Sbjct: 368 SWSAMIASYEQAGQHDEAISLFRDMM 393
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 185/421 (43%), Gaps = 54/421 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D NT+IS+Y ++ A Y R P+ +TF L+ + + + + C
Sbjct: 353 DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQAC- 411
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+IK G S + + N+LI Y+ G ++ A +LF+ L ++L SWN+++ G+ G
Sbjct: 412 --IIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNG--- 466
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
P + L ++ ++ V + +A T+ +++ C
Sbjct: 467 --------FPFEGLERFSCLLE------------------SEVRILPDAYTLSTLLSICV 500
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
++ L G H ++R ++ ALI+MY +C ++ + VF +M+ +++VSWN+
Sbjct: 501 STSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNS 560
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXX 413
+I + HG E+ ++ + M D G ++ PD TF +
Sbjct: 561 LISAYSRHGEGENAVNTYKTM-----------------QDEG--KVIPDAATFSAVLSAC 601
Query: 414 XXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMS 473
G F M + G+ N H C+ +LL AG +DEAE ++ K G S
Sbjct: 602 SHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIG--S 659
Query: 474 RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQ 533
R + WA L + C D+ LG+ AKLL++ + + Y L IYA A W+ +
Sbjct: 660 RVDVWWA-LFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETR 718
Query: 534 K 534
+
Sbjct: 719 R 719
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P TFV ++GSC C G + H IK G++ V N+ + MY+
Sbjct: 289 PTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSS---------- 335
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
F+ D +AH +F+ + +K+LVTWN MIS + +A+ A+
Sbjct: 336 FE---------------------DFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAM 374
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
+++ M +G+K + T ++ S L V II+ S + + ALI Y
Sbjct: 375 SVYKRMHIIGVKPDEFTFGSLLAT---SLDLDVLEMVQACIIKFGLSSKIEISNALISAY 431
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLF 371
K ++E A +FER +NL+SWNA+I G +G P +GL F
Sbjct: 432 SKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERF 475
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 33/269 (12%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ Y+ I + + + G + H I++G V N+L+ +Y G++ +
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVT-WNIMISGFLKARNPGYA 266
FD + D+ SW +++ + GD+ A +FD MP+++ V WN MI+G ++ +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIR--MFSRSSLILDTALI 324
++LFREM +G++ + +++ C + L G+ VH +I+ F SS++ ALI
Sbjct: 175 VELFREMHKLGVRHDKFGFATILSMCDYGS-LDFGKQVHSLVIKAGFFIASSVV--NALI 231
Query: 325 DMYCKCRRVELATRVFER--MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKG 382
MY C+ V A VFE + R+ V++N +I DGL+ F
Sbjct: 232 TMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI----------DGLAGFKR--------- 272
Query: 383 EVEIDESPCADRGVVR--LQPDEVTFIGI 409
DES R ++ L+P ++TF+ +
Sbjct: 273 ----DESLLVFRKMLEASLRPTDLTFVSV 297
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 133/322 (41%), Gaps = 60/322 (18%)
Query: 88 TLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSL-RFRF 146
TLLS + L +++ +F D N +I+ CK H V FR + +
Sbjct: 128 TLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITG-CKESGYHETSVELFREMHKLGV 186
Query: 147 FPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV 206
+ + F ++ C + G + G++ H+ VIK GF V N+LI MY +C V A +
Sbjct: 187 RHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACL 245
Query: 207 LFDS--MLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG 264
+F+ + RD ++N ++DG ++GF +
Sbjct: 246 VFEETDVAVRDQVTFNVVIDG----------------------------LAGFKRDE--- 274
Query: 265 YALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
+L +FR+M L+ T V V+ +C +A G VHG I+ ++ A +
Sbjct: 275 -SLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATM 330
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
MY A +VFE + ++LV+WN MI + + +S++ M
Sbjct: 331 TMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM---------- 380
Query: 385 EIDESPCADRGVVRLQPDEVTF 406
++ ++PDE TF
Sbjct: 381 ----------HIIGVKPDEFTF 392
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 33/379 (8%)
Query: 183 SVLPVQ-----NSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
S +P++ N LI Y +C ++++AR FD+M ++ SW +M+ GY + GD+ SA
Sbjct: 225 SAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEE 284
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREM--GSVGLKGNATTMVCVVTACGRS 295
LF +M K+ + ++ MI+ + + P ALKLF +M + ++ + T+ VV+A +
Sbjct: 285 LFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQL 344
Query: 296 ARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
G V I + +L T+LID+Y K A ++F + ++ VS++AMI
Sbjct: 345 GNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMI 404
Query: 356 LGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXX 415
+G I+G + SLF M+ ++ P+ VTF G+
Sbjct: 405 MGCGINGMATEANSLFTAMIEK--------------------KIPPNVVTFTGLLSAYSH 444
Query: 416 XXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRE 475
G F M D L+P+ H M ++L AG ++EA + +++M M
Sbjct: 445 SGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP-----MQPN 498
Query: 476 SMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKL 535
+ +W LL +V GE V + L +IY+ +W++ TV+
Sbjct: 499 AGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDS 558
Query: 536 MKERRLGIIPGSSLVDLKY 554
+KE++L G S V+ Y
Sbjct: 559 IKEKKLCKTLGCSWVEGSY 577
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 152/322 (47%), Gaps = 27/322 (8%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+S+ ++ +CG +V G+ HAQ +KNG + VQ L+ +Y+ G +++A+
Sbjct: 102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKA 161
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD + ++ SWNS++ GYLE+G+L A +FD +P+K+ V+WN++IS + K + G A
Sbjct: 162 FDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNAC 221
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
LF M LK A+ + + G +E + M ++ + T +I Y
Sbjct: 222 SLFSAM---PLKSPASWNILI----GGYVNCREMKLARTYFDAMPQKNGVSWIT-MISGY 273
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
K V+ A +F M+ ++ + ++AMI + +G P+D L LF +M+ +
Sbjct: 274 TKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSY------- 326
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
+QPDE+T + G ++ + G+K + + +
Sbjct: 327 -----------IQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGIKIDDLLSTSLID 374
Query: 448 LLANAGLVDEAEKCLRNMAKFD 469
L G +A K N+ K D
Sbjct: 375 LYMKGGDFAKAFKMFSNLNKKD 396
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 102/219 (46%), Gaps = 32/219 (14%)
Query: 165 CIV--SGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASW-NS 221
C+V ++ HAQ++ N ++ + P+ L+H + F +R++ ++
Sbjct: 13 CVVLEQAKQVHAQLVVNRYNHLEPI---LVHQ----------TLHFTKEFSRNIVTYVKR 59
Query: 222 MVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGN 281
++ G+ + H F +W ++ + R + ++ +M + G+ +
Sbjct: 60 ILKGF-------NGHDSF---------SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPS 103
Query: 282 ATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFE 341
+ + V+ ACG+ + +G+ +H ++ + + T L+ +Y + +ELA + F+
Sbjct: 104 SHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFD 163
Query: 342 RMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
+ +N VSWN+++ G+ G ++ +FD++ D V
Sbjct: 164 DIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAV 202
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 7/220 (3%)
Query: 88 TLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF 147
T++S + L V +FR + D + +I+ Y ++ P A + + L +
Sbjct: 268 TMISGYTKLGDVQSAEELFRLMSKK-DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSY 326
Query: 148 --PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
P+ T ++ + G G + + ++G + SLI +Y GD A
Sbjct: 327 IQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAF 386
Query: 206 VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKAR 261
+F ++ +D S+++M+ G G + A++LF M +K N+VT+ ++S + +
Sbjct: 387 KMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSG 446
Query: 262 NPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEG 301
K F M L+ +A +V GR+ RL+E
Sbjct: 447 LVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEA 486
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 2/271 (0%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+F NP D N ++ Y + A V +F+ L P ++T ++ +C +
Sbjct: 219 VFDEIVNPSDV-SWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSL 277
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
+ G+ HA +K + V S+ MY C ++ AR +FD ++DL SW S +
Sbjct: 278 ALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMS 337
Query: 225 GYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
GY +G A LFD+MP++N+V+WN M+ G++ A AL M + T
Sbjct: 338 GYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVT 397
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
+V ++ C + ++ G+ HG I R +++I+ AL+DMY KC ++ A F +M+
Sbjct: 398 LVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS 457
Query: 345 N-RNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
R+ VSWNA++ G G E LS F+ M
Sbjct: 458 ELRDEVSWNALLTGVARVGRSEQALSFFEGM 488
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 151/357 (42%), Gaps = 58/357 (16%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPN--SYTFVPLIGSCGNTGCIVSGRKCHAQV 176
N ++ Y +H+ + F +L + N + T V ++ C + G++ H +
Sbjct: 364 NAMLGGYVHAHE--WDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
++G+D+ + V N+L+ MY C G L SA+
Sbjct: 422 YRHGYDTNVIVANALLDMYGKC-------------------------------GTLQSAN 450
Query: 237 ALFDVMPD-KNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRS 295
F M + ++ V+WN +++G + AL F M V K + T+ ++ C
Sbjct: 451 IWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANI 509
Query: 296 ARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
L G+++HG +IR + +++ A++DMY KCR + A VF+ R+L+ WN++I
Sbjct: 510 PALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSII 569
Query: 356 LGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXX 415
G C +G ++ LF + + GV +PD VTF+GI
Sbjct: 570 RGCCRNGRSKEVFELFMLL-----------------ENEGV---KPDHVTFLGILQACIR 609
Query: 416 XXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
G YF M+ + + P H CM L G + + E+ L M FD M
Sbjct: 610 EGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMP-FDPPM 665
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 152 TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM 211
+F ++ SCG + R+ H V+K G+ + ++ S++ +Y C + AR +FD +
Sbjct: 164 SFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI 223
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
+ SWN +V YLE G A +F M + N+ N +S
Sbjct: 224 VNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSS--------------- 268
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
V+ AC RS L+ G+ +H +++ + ++ T++ DMY KC
Sbjct: 269 ----------------VMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCD 312
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
R+E A RVF++ +++L SW + + G+ + G + LFD M
Sbjct: 313 RLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM 355
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 36/234 (15%)
Query: 148 PNSY-TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPV--QNSLIHMYADCGDVQVA 204
P SY + L SC + +V RK + ++ F + P+ N I Y CG V A
Sbjct: 58 PVSYWLYERLFRSCSSKALVVQARKVQSHLVT--FSPLPPIFLLNRAIEAYGKCGCVDDA 115
Query: 205 RVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG 264
R LF+ M RD SWN+++ + G + D+
Sbjct: 116 RELFEEMPERDGGSWNAVITACAQNG-----------VSDE------------------- 145
Query: 265 YALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
++FR M G++ T+ V+ +CG L+ R +H ++++ ++ L+T+++
Sbjct: 146 -VFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIV 204
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
D+Y KCR + A RVF+ + N + VSWN ++ + G ++ + +F +M+ ++
Sbjct: 205 DVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELN 258
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 198/446 (44%), Gaps = 64/446 (14%)
Query: 120 TVISAYCKSHDPHLAQVFYFRSL-RFRFFPNSYTFVPLIGSCG--NTGCIVSGRKCHAQV 176
T + + C ++ + V FR++ R PN T + ++ +C N G + ++ H
Sbjct: 220 TAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV-KEIHGFS 278
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
++G + + + + MY CG+V ++RVLF++ R
Sbjct: 279 FRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR---------------------- 316
Query: 237 ALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA 296
++V W+ MISG+ + + + L +M G++ N+ T++ +V+AC S
Sbjct: 317 ---------DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNST 367
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMIL 356
L +VH I++ S ++L ALIDMY KC + A VF +T ++LVSW++MI
Sbjct: 368 LLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMIN 427
Query: 357 GHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXX 416
+ +HG + L +F M +KG E+ D++ F+ I
Sbjct: 428 AYGLHGHGSEALEIFKGM-----IKGGHEV---------------DDMAFLAILSACNHA 467
Query: 417 XXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRES 476
++ F Q + + H C NLL G +D+A + NM M +
Sbjct: 468 GLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMP-----MKPSA 521
Query: 477 MLWANLLALCRF--RRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQK 534
+W++LL+ C R DV G+ A L+ P N A Y L I+ + + V++
Sbjct: 522 RIWSSLLSACETHGRLDV-AGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRR 580
Query: 535 LMKERRLGIIPGSSLVDLKYIVHNFK 560
+M+ R+L G S ++ + + +++
Sbjct: 581 VMQRRKLNKCYGFSKIEPELQIEDYQ 606
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 17/271 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT N++IS Y K + + + L ++ ++ +I SC G + K
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLH----RDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDV-QVAR-----VLFDSMLARDLASWNSMVDGYL 227
++ GF + SL+ + G +VAR VL D + + ++VD YL
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 228 EAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVC 287
+ D ++A +FD M KN V+W MISG + +N + LFR M L+ N T++
Sbjct: 197 KFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 288 VVTACGRSARLKEGRS----VHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
V+ AC L G S +HG R + L A + MYC+C V L+ +FE
Sbjct: 257 VLPAC---VELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETS 313
Query: 344 TNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
R++V W++MI G+ G + ++L ++M
Sbjct: 314 KVRDVVMWSSMISGYAETGDCSEVMNLLNQM 344
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 4/195 (2%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D +++IS Y ++ D + + NS T + ++ +C N+ + H
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+Q++K GF S + + N+LI MYA CG + AR +F + +DL SW+SM++ Y G S
Sbjct: 377 SQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGS 436
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPG----YALKLFREMGSVGLKGNATTMVCVV 289
A +F M ++ L A N A +F + G + C +
Sbjct: 437 EALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYI 496
Query: 290 TACGRSARLKEGRSV 304
GR ++ + V
Sbjct: 497 NLLGRFGKIDDAFEV 511
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 173/397 (43%), Gaps = 47/397 (11%)
Query: 104 LIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNT 163
L F Y + + C N ++S Y P +F + L+ F P YTF + SC
Sbjct: 372 LCFDYIRDK-NIVCWNALLSGYANKDGPICLSLF-LQMLQMGFRPTEYTFSTALKSC--- 426
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLAS----- 218
C+ ++ H+ +++ G++ V +SL+ YA +++ D++L D AS
Sbjct: 427 -CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK------NQLMNDALLLLDWASGPTSV 479
Query: 219 --WNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSV 276
N + Y G + L + + V+WNI I+ ++ ++LF+ M
Sbjct: 480 VPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQS 539
Query: 277 GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDMYCKCRRVEL 335
++ + T V +++ C + L G S+HG I + FS + + LIDMY KC +
Sbjct: 540 NIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRS 599
Query: 336 ATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRG 395
+VFE +NL++W A+I IHG ++ L F E + +
Sbjct: 600 VMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLG----------------- 642
Query: 396 VVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLV 455
+PD V+FI I G F++M D +G++P H C +LLA G +
Sbjct: 643 ---FKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYL 698
Query: 456 DEAEKCLRNMAKFDGDMSRESMLWANLLALC-RFRRD 491
EAE +R M F D + +W L C RF +
Sbjct: 699 KEAEHLIREMP-FPAD----APVWRTFLDGCNRFAEE 730
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 136 VFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVS---GRKCHAQVIKNGFDSVLPVQNSLI 192
+F+FR L S T +G C+ ++ H K G D + V NSLI
Sbjct: 200 MFFFRELVR--MGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLI 257
Query: 193 HMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNI 252
Y CG+ +A +F +D SW+ +V+WN
Sbjct: 258 SAYGKCGNTHMAERMF-----QDAGSWD--------------------------IVSWNA 286
Query: 253 MISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMF 312
+I K+ NP ALKLF M G N T V V+ L GR +HG +I+
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 313 SRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFD 372
+ ++L ALID Y KC +E + F+ + ++N+V WNA++ G+ P LSLF
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGP-ICLSLFL 405
Query: 373 EMVGM 377
+M+ M
Sbjct: 406 QMLQM 410
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 162/408 (39%), Gaps = 71/408 (17%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N +I A KS +P A + F PN T+V ++G + GR+ H
Sbjct: 280 DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIH 339
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+IKNG ++ + + N+LI YA CG+++ +R+ FD + +++ WN+++ GY
Sbjct: 340 GMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN----- 394
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
++ L LF +M +G + T + +C
Sbjct: 395 ---------------------------KDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC 427
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN-RNLVSWN 352
+ E + +H I+RM + + ++L+ Y K + + A + + + ++V N
Sbjct: 428 ----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLN 483
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCAD--RGVVRL---------QP 401
+ + G + + L + D V + I +D V+ L +P
Sbjct: 484 IVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRP 543
Query: 402 DEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKC 461
D+ TF+ I G S +T K +F+ C + N L+D KC
Sbjct: 544 DKYTFVSILSLCSKLCDLTLGSSIHGLIT-----KTDFS---CADTFVCNV-LIDMYGKC 594
Query: 462 --LRNMAK-FDGDMSRESMLWANLL-----------ALCRFRRDVYLG 495
+R++ K F+ + + W L+ AL +F+ + LG
Sbjct: 595 GSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLG 642
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 210 SMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKL 269
S+L + + N+++ Y + G++S A +FD MP++N V++N +I G+ K + A +
Sbjct: 43 SVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGV 102
Query: 270 FREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIR--MFSRSSLILDTALIDMY 327
F EM G N +T V + +C S ++ G +HG ++ +F + + T L+ +Y
Sbjct: 103 FSEMRYFGYLPNQST-VSGLLSCA-SLDVRAGTQLHGLSLKYGLFMADAFV-GTCLLCLY 159
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAM--ILGHCIHGSPEDGLSLFDEMVGM 377
+ +E+A +VFE M ++L +WN M +LGH G ++ + F E+V M
Sbjct: 160 GRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH--RGFLKECMFFFRELVRM 209
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 105/262 (40%), Gaps = 44/262 (16%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
NT+I Y K D A + F + PN T L+ SC + + +G + H +K
Sbjct: 84 NTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLD-VRAGTQLHGLSLK 141
Query: 179 NG-FDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
G F + V L+ +Y G L+ L A
Sbjct: 142 YGLFMADAFVGTCLLCLY-----------------------------GRLDL--LEMAEQ 170
Query: 238 LFDVMPDKNLVTWNIMIS-----GFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
+F+ MP K+L TWN M+S GFLK + FRE+ +G ++ + V+
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKE-----CMFFFRELVRMGASLTESSFLGVLKGV 225
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
L + +H S + + + +LI Y KC +A R+F+ + ++VSWN
Sbjct: 226 SCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 353 AMILGHCIHGSPEDGLSLFDEM 374
A+I +P L LF M
Sbjct: 286 AIICATAKSENPLKALKLFVSM 307
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 188/448 (41%), Gaps = 68/448 (15%)
Query: 114 DTFCVNTVISAYCKSHDPH----LAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSG 169
D +I+ Y + D L ++ F +R PN+ T L+ CG+ + G
Sbjct: 283 DVITWTCMINGYTEDGDVENALELCRLMQFEGVR----PNAVTIASLVSVCGDALKVNDG 338
Query: 170 RKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEA 229
+ H ++ S + ++ SLI MYA C V + +F W++++ G ++
Sbjct: 339 KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQ- 397
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
N ++S AL LF+ M ++ N T+ ++
Sbjct: 398 ---------------------NELVSD---------ALGLFKRMRREDVEPNIATLNSLL 427
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF----ERMTN 345
A A L++ ++H + + SSL T L+ +Y KC +E A ++F E+ +
Sbjct: 428 PAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVT 405
+++V W A+I G+ +HG + L +F EMV GV P+E+T
Sbjct: 488 KDVVLWGALISGYGMHGDGHNALQVFMEMV-----------------RSGVT---PNEIT 527
Query: 406 FIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNM 465
F G + F+ M + + H C+ +LL AG +DEA + +
Sbjct: 528 FTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTI 587
Query: 466 AKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQ 525
S +W LLA C +V LGE A L ++ P+N Y L IYA +
Sbjct: 588 P-----FEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGR 642
Query: 526 WENVSTVQKLMKERRLGIIPGSSLVDLK 553
W+++ V+ +M+ L PG S ++++
Sbjct: 643 WKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 32/294 (10%)
Query: 81 RIPFLARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFR 140
R ++ LL+ N V+ +F N D NT+IS Y ++ + A + +
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNR-DVISWNTMISGYYRNGYMNDALMMFDW 208
Query: 141 SLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGD 200
+ + T V ++ CG+ + GR H V + + V+N+L++MY
Sbjct: 209 MVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMY----- 263
Query: 201 VQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKA 260
L+ G + A +FD M ++++TW MI+G+ +
Sbjct: 264 --------------------------LKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 261 RNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD 320
+ AL+L R M G++ NA T+ +V+ CG + ++ +G+ +HG +R S +I++
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 321 TALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
T+LI MY KC+RV+L RVF + + W+A+I G + D L LF M
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 33/254 (12%)
Query: 119 NTVISAYCKSHDPHLAQVFYFR--SLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQV 176
N VI Y + H A + R S + P+ YT+ + + G + G H ++
Sbjct: 84 NIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI 143
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAH 236
+++ F VQN+L+ MY + G V++AR +FD M RD+ SWN+M+ GY G ++ A
Sbjct: 144 LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDAL 203
Query: 237 ALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSA 296
+FD M ++ SV L + T+V ++ CG
Sbjct: 204 MMFDWMVNE-----------------------------SVDL--DHATIVSMLPVCGHLK 232
Query: 297 RLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMIL 356
L+ GR+VH + + + AL++MY KC R++ A VF+RM R++++W MI
Sbjct: 233 DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 357 GHCIHGSPEDGLSL 370
G+ G E+ L L
Sbjct: 293 GYTEDGDVENALEL 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Query: 226 YLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK--GNAT 283
Y G ++ A LF+ MP +L+++NI+I +++ A+ +F M S G+K +
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
T V A G +K G VHG I+R + + AL+ MY +VE+A VF+ M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 344 TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
NR+++SWN MI G+ +G D L +FD MV
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 160/342 (46%), Gaps = 26/342 (7%)
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARN-PGYALKLF 270
R A S+V+ Y++ G L++A L + ++L++ +I+GF + N A +F
Sbjct: 245 FGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIF 304
Query: 271 REMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS-RSSLILDTALIDMYCK 329
++M + K + + ++ C A + GR +HG ++ R + L +LIDMY K
Sbjct: 305 KDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAK 364
Query: 330 CRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDES 389
+E A FE M +++ SW ++I G+ HG+ E + L++ M E E
Sbjct: 365 SGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM--------EHE---- 412
Query: 390 PCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLL 449
R++P++VTF+ + G + M + G++ HL C+ ++L
Sbjct: 413 --------RIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDML 464
Query: 450 ANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKN 509
A +G ++EA +R+ +G +S S W L CR +V L + A L+ M P+
Sbjct: 465 ARSGYLEEAYALIRSK---EGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRK 521
Query: 510 LACYQFLLIIYAVAAQWENVSTVQKLMKER-RLGIIPGSSLV 550
Y L +YA W+N +KLMKE PG SLV
Sbjct: 522 PVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 99/203 (48%), Gaps = 31/203 (15%)
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
H I NGF S L +++ LI +Y GDV+ AR LFD + RD+ SW +M+ + G
Sbjct: 35 HGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG-- 92
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
PD AL LF+EM +K N T V+ +C
Sbjct: 93 --------YHPD---------------------ALLLFKEMHREDVKANQFTYGSVLKSC 123
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
LKEG +HGS+ + +LI+ +AL+ +Y +C ++E A F+ M R+LVSWN
Sbjct: 124 KDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWN 183
Query: 353 AMILGHCIHGSPEDGLSLFDEMV 375
AMI G+ + + SLF M+
Sbjct: 184 AMIDGYTANACADTSFSLFQLML 206
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 34/241 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
N +T+ ++ SC + GC+ G + H V K L V+++L+ +YA CG ++ AR+
Sbjct: 111 ANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FDSM RDL SWN+M+DGY +A+A D +
Sbjct: 171 FDSMKERDLVSWNAMIDGY-------TANACADT------------------------SF 199
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDM 326
LF+ M + G K + T ++ A L+ +HG I++ F RSS ++ +L++
Sbjct: 200 SLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI-RSLVNA 258
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGS-PEDGLSLFDEMVGMDKVKGEVE 385
Y KC + A ++ E R+L+S A+I G + D +F +M+ M EV
Sbjct: 259 YVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVV 318
Query: 386 I 386
+
Sbjct: 319 V 319
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVAR-----VLFDSMLARDLASWNSMVDGYLEAGD 231
+K D V V +S++ + V + R L S + D+A NS++D Y ++G+
Sbjct: 310 MKTKMDEV--VVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGE 367
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
+ A F+ M +K++ +W +I+G+ + N A+ L+ M +K N T + +++A
Sbjct: 368 IEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSA 427
Query: 292 CGRSARLKEGRSVHGSII 309
C + + + G ++ ++I
Sbjct: 428 CSHTGQTELGWKIYDTMI 445
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 193/445 (43%), Gaps = 64/445 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN T ++ +C + + HA +++ D + V NSL+ YA V A +
Sbjct: 425 PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNV 484
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
SM RD ++ S+V + E G H + AL
Sbjct: 485 IRSMKRRDNITYTSLVTRFNELGK----HEM---------------------------AL 513
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVH-GSIIRMFSRSSLILDTALIDM 326
+ M G++ + ++ ++A L+ G+ +H S+ FS ++ +L++ L+DM
Sbjct: 514 SVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNS-LVDM 572
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y KC +E A +VFE + ++VSWN ++ G +G LS F+EM +
Sbjct: 573 YSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM----------RM 622
Query: 387 DESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
E+ +PD VTF+ + G YF+ M ++ ++P H +
Sbjct: 623 KET----------EPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLV 672
Query: 447 NLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMY 506
+L AG ++EA + M + +M++ LL CR+R ++ LGE A + +
Sbjct: 673 GILGRAGRLEEATGVVETM-----HLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALA 727
Query: 507 PKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSE--- 563
P + A Y L +Y + + E + LM E+RL G S V+++ VH+F VSE
Sbjct: 728 PSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSF-VSEDVT 786
Query: 564 --KRHEGIEAVNMMMDELARRFRMP 586
+ GI A + E +RF P
Sbjct: 787 RVDKTNGIYAEIESIKEEIKRFGSP 811
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 38/273 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT +IS+ + A FY ++ PN +TFV L+G+ G + G+ H
Sbjct: 189 DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIH 247
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+ +I G + ++ SL+ Y+ ++ A + +S +D+ W S+V
Sbjct: 248 SNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVV---------- 297
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
SGF++ A+ F EM S+GL+ N T +++ C
Sbjct: 298 ---------------------SGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVEL-ATRVFERMTNRNLVSWN 352
L G+ +H I++ S + AL+DMY KC E+ A+RVF M + N+VSW
Sbjct: 337 AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVE 385
+ILG HG +D L EM VK EVE
Sbjct: 397 TLILGLVDHGFVQDCFGLLMEM-----VKREVE 424
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 32/259 (12%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQ 175
F +ISA+ KS + A + + PN +TF ++ SC I G + H
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSA 235
VIK GF+ V +SL +Y+ CG + A
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFK-------------------------------EA 178
Query: 236 HALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRS 295
LF + + + ++W +MIS + AR AL+ + EM G+ N T V ++ A
Sbjct: 179 CELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL 238
Query: 296 ARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMI 355
L+ G+++H +II +++L T+L+D Y + ++E A RV +++ W +++
Sbjct: 239 G-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVV 297
Query: 356 LGHCIHGSPEDGLSLFDEM 374
G + ++ + F EM
Sbjct: 298 SGFVRNLRAKEAVGTFLEM 316
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
L +L N+++ YL+ + +A LFD M + + W +MIS F K++ AL LF
Sbjct: 54 LLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFE 113
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCR 331
EM + G N T VV +C + G VHGS+I+ + ++ ++L D+Y KC
Sbjct: 114 EMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCG 173
Query: 332 RVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+ + A +F + N + +SW MI + L + EMV
Sbjct: 174 QFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMV 217
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D F +V+S + ++ A + PN++T+ ++ C + G++ H
Sbjct: 289 DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIH 348
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADC--GDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
+Q IK GF+ V N+L+ MY C +V+ +RV F +M++ ++ SW +++ G ++ G
Sbjct: 349 SQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRV-FGAMVSPNVVSWTTLILGLVDHGF 407
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
+ L EM ++ N T+ V+ A
Sbjct: 408 VQDCFG-------------------------------LLMEMVKREVEPNVVTLSGVLRA 436
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
C + ++ +H ++R +++ +L+D Y R+V+ A V M R+ +++
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITY 496
Query: 352 NAMILGHCIHGSPEDGLSLFDEMVG 376
+++ G E LS+ + M G
Sbjct: 497 TSLVTRFNELGKHEMALSVINYMYG 521
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 169/387 (43%), Gaps = 34/387 (8%)
Query: 161 GNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYA-DCGDVQVARVLFDSMLARDLASW 219
G C+V R C+ ++ G +++ + H+ A G V V+ + D+ +
Sbjct: 303 GALNCVVGMRNCNVRI---GSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV 359
Query: 220 -NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL 278
NS++ Y DL A +F + +L TWN +ISGF L +EM G
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS-RSSLILDTALIDMYCKCRRVELAT 337
N T+ ++ R L+ G+ H I+R S + LIL +L+DMY K + A
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVV 397
RVF+ M R+ V++ ++I G+ G E L+ F +M DR +
Sbjct: 480 RVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM------------------DRSGI 521
Query: 398 RLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDE 457
+ PD VT + + G F +M VFG++ H CM +L AG +D+
Sbjct: 522 K--PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 458 AEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFA-KLLVDMYPKNLACYQFL 516
A + S + A LL C + +GE A KLL++ P++L Y L
Sbjct: 580 ARDIFHTIP-----YEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLL 634
Query: 517 LIIYAVAAQWENVSTVQKLMKERRLGI 543
+YAV W + TV+ L+ + LG+
Sbjct: 635 ADMYAVTGSWSKLVTVKTLLSD--LGV 659
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 38/255 (14%)
Query: 125 YCKSHDPHLAQVFYFRSLRFRFFPNSYTFV-----PLIGSCGNTGCIVSGRKCHAQVIKN 179
+C SH L + F SL R+ S+ FV L+ +C V G++ HA I +
Sbjct: 55 HCISHG-QLYEAFRTFSL-LRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 180 GFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALF 239
G + FDS+L L ++ S + EA ++ +
Sbjct: 113 GLE-------------------------FDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 240 DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLK 299
+P WN++I +++ + ++ +++ M S G++ + T V+ AC
Sbjct: 148 HPLP------WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFA 201
Query: 300 EGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHC 359
GR VHGSI R +L + ALI MY + +V++A R+F+RM+ R+ VSWNA+I +
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 360 IHGSPEDGLSLFDEM 374
+ L D M
Sbjct: 262 SEEKLGEAFKLLDRM 276
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 169/387 (43%), Gaps = 34/387 (8%)
Query: 161 GNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYA-DCGDVQVARVLFDSMLARDLASW 219
G C+V R C+ ++ G +++ + H+ A G V V+ + D+ +
Sbjct: 303 GALNCVVGMRNCNVRI---GSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV 359
Query: 220 -NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL 278
NS++ Y DL A +F + +L TWN +ISGF L +EM G
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 279 KGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS-RSSLILDTALIDMYCKCRRVELAT 337
N T+ ++ R L+ G+ H I+R S + LIL +L+DMY K + A
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 338 RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVV 397
RVF+ M R+ V++ ++I G+ G E L+ F +M DR +
Sbjct: 480 RVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM------------------DRSGI 521
Query: 398 RLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDE 457
+ PD VT + + G F +M VFG++ H CM +L AG +D+
Sbjct: 522 K--PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 458 AEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFA-KLLVDMYPKNLACYQFL 516
A + S + A LL C + +GE A KLL++ P++L Y L
Sbjct: 580 ARDIFHTIP-----YEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLL 634
Query: 517 LIIYAVAAQWENVSTVQKLMKERRLGI 543
+YAV W + TV+ L+ + LG+
Sbjct: 635 ADMYAVTGSWSKLVTVKTLLSD--LGV 659
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 38/255 (14%)
Query: 125 YCKSHDPHLAQVFYFRSLRFRFFPNSYTFV-----PLIGSCGNTGCIVSGRKCHAQVIKN 179
+C SH L + F SL R+ S+ FV L+ +C V G++ HA I +
Sbjct: 55 HCISHG-QLYEAFRTFSL-LRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 180 GFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALF 239
G + FDS+L L ++ S + EA ++ +
Sbjct: 113 GLE-------------------------FDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 240 DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLK 299
+P WN++I +++ + ++ +++ M S G++ + T V+ AC
Sbjct: 148 HPLP------WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFA 201
Query: 300 EGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHC 359
GR VHGSI R +L + ALI MY + +V++A R+F+RM+ R+ VSWNA+I +
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 360 IHGSPEDGLSLFDEM 374
+ L D M
Sbjct: 262 SEEKLGEAFKLLDRM 276
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 137/257 (53%), Gaps = 5/257 (1%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFP-NSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
NTV+S+ K H A ++ R F +S+T L+ SC ++ ++ GR+ H + I
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAI 312
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHA 237
+ G L V N+LI Y+ D++ L++ M+A+D ++ M+ Y+ G + SA
Sbjct: 313 RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVE 372
Query: 238 LFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSAR 297
+F + +KN +T+N +++GF + + ALKLF +M G++ ++ V ACG +
Sbjct: 373 IFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSE 432
Query: 298 LKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA---M 354
K +HG I+ + + + TAL+DM +C R+ A +F++ + NL S A +
Sbjct: 433 KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPS-NLDSSKATTSI 491
Query: 355 ILGHCIHGSPEDGLSLF 371
I G+ +G P+ +SLF
Sbjct: 492 IGGYARNGLPDKAVSLF 508
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 183/460 (39%), Gaps = 65/460 (14%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
+T N +++ +C++ A + L+ ++ + +CG +VS +K
Sbjct: 381 NTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACG----LVSEKKVS 436
Query: 174 AQV----IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEA 229
Q+ IK G +Q +L+ M C + A +FD W S
Sbjct: 437 EQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ--------WPS-------- 480
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLF-REMGSVGLKGNATTMVCV 288
+L S+ A + I G+ + P A+ LF R + L + ++ +
Sbjct: 481 -NLDSSKATTSI------------IGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLI 527
Query: 289 VTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL 348
+ CG + G +H ++ S + L +LI MY KC + A ++F M ++
Sbjct: 528 LAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDV 587
Query: 349 VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIG 408
+SWN++I + + + ++ L+L+ M E EI +PD +T
Sbjct: 588 ISWNSLISCYILQRNGDEALALWSRM-------NEKEI-------------KPDIITLTL 627
Query: 409 IXXXXXXXXXXXXG--RSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMA 466
+ R F M ++ ++P H +L + GL++EAE + +M
Sbjct: 628 VISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMP 687
Query: 467 KFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQW 526
+ E + LL CR + + ++ AKL++ P+ + Y IY+ + W
Sbjct: 688 -----VQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFW 742
Query: 527 ENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
+++ M+ER P S + + +H+F + H
Sbjct: 743 HRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSH 782
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 63/261 (24%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMY-ADCGDVQVARV 206
PN YTFV ++ +C G + H ++K+GF + + V NSL+ +Y D G
Sbjct: 179 PNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSG------- 231
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
S D L+ LFD +P +++ +WN ++S +K A
Sbjct: 232 --------------SSCDDVLK---------LFDEIPQRDVASWNTVVSSLVKEGKSHKA 268
Query: 267 LKLFREMGSV-GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALID 325
LF EM V G ++ T+ ++++C S+ L GR +HG IR+ L ++ ALI
Sbjct: 269 FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIG 328
Query: 326 MYCK---CRRVEL----------------------------ATRVFERMTNRNLVSWNAM 354
Y K ++VE A +F +T +N +++NA+
Sbjct: 329 FYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNAL 388
Query: 355 ILGHCIHGSPEDGLSLFDEMV 375
+ G C +G L LF +M+
Sbjct: 389 MAGFCRNGHGLKALKLFTDML 409
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 175/402 (43%), Gaps = 57/402 (14%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN YT V L + ++ HA +K DS V +L++MY+ C +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI------ 258
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
+SA ++F+ + + +LV + +I+G+ + N AL
Sbjct: 259 -------------------------ASACSVFNSISEPDLVACSSLITGYSRCGNHKEAL 293
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
LF E+ G K + + V+ +C + G+ VH +IR+ + + +ALIDMY
Sbjct: 294 HLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMY 353
Query: 328 CKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEID 387
KC ++ A +F + +N+VS+N++ILG +HG F E++ M
Sbjct: 354 SKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMG--------- 404
Query: 388 ESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
L PDE+TF + G+ F++M FG++P H M
Sbjct: 405 -----------LIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVK 453
Query: 448 LLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYP 507
L+ AG ++EA + + ++ K +S + LL+ C + +L E A+ +
Sbjct: 454 LMGMAGKLEEAFEFVMSLQK-----PIDSGILGALLSCCEVHENTHLAEVVAENIHKNGE 508
Query: 508 KNLACYQFLLI-IYAVAAQWENVSTVQKLMKERRLGIIPGSS 548
+ + Y+ +L +YA +W+ V ++ + E G +PG S
Sbjct: 509 ERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 31/261 (11%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
F N++I AY K+H + + LR P+++T+ C
Sbjct: 70 SVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYA-----------------CL 112
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
A+ FD+ G + + S L D +++V Y +AG +
Sbjct: 113 ARGFSESFDTK--------------GLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIV 158
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
A LF +PD +L WN+MI G+ + LF M G + N TMV + +
Sbjct: 159 EASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLI 218
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
+ L SVH +++ S + AL++MY +C + A VF ++ +LV+ ++
Sbjct: 219 DPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSS 278
Query: 354 MILGHCIHGSPEDGLSLFDEM 374
+I G+ G+ ++ L LF E+
Sbjct: 279 LITGYSRCGNHKEALHLFAEL 299
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%)
Query: 210 SMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKL 269
S LARD + Y DL SA LFDV P++++ WN +I + KA L L
Sbjct: 34 SKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSL 93
Query: 270 FREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCK 329
F ++ + + T C+ S K R +HG I I +A++ Y K
Sbjct: 94 FSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSK 153
Query: 330 CRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ A+++F + + +L WN MILG+ G + G++LF+ M
Sbjct: 154 AGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 190/433 (43%), Gaps = 63/433 (14%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRF-RFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D N+++S C + L + F ++F P+ F+ + C I SG++
Sbjct: 279 DVISWNSIVSV-CADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQI 337
Query: 173 HAQVIKNGFD-SVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
H V+K GFD S L VQ++LI MY C ++ + +L+ S+ +L NS++ + G
Sbjct: 338 HCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGI 397
Query: 232 LSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
+F +M D+ + +S LKA +L L + S L
Sbjct: 398 TKDIIEMFGLMIDEGTGIDEVTLSTVLKA----LSLSLPESLHSCTL------------- 440
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
VH I+ + + + +LID Y K + E++ +VF+ + N+
Sbjct: 441 ------------VHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCL 488
Query: 352 NAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXX 411
++I G+ +G D + + EM DR + L PDEVT + +
Sbjct: 489 TSIINGYARNGMGTDCVKMLREM------------------DR--MNLIPDEVTILSVLS 528
Query: 412 XXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGD 471
G F + +G+ P CM +LL AGLV++AE+ L A+ D D
Sbjct: 529 GCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQ-ARGDAD 587
Query: 472 MSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACY----QFLLII--YAVAAQ 525
+ W++LL CR R+ +G + A++L+++ P+N A Y +F I + ++ Q
Sbjct: 588 ----CVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQ 643
Query: 526 WENVSTVQKLMKE 538
++ ++LM+E
Sbjct: 644 IREIAASRELMRE 656
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 93/169 (55%), Gaps = 4/169 (2%)
Query: 201 VQVARVLFDSMLARD----LASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISG 256
+ R+ F S L + + + N +D +++G+L SAH FD M +++VT+N++ISG
Sbjct: 27 IATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISG 86
Query: 257 FLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSS 316
+ A++L+ EM S GL+ +A+T V++ C +EG VH +I + +
Sbjct: 87 NSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCN 146
Query: 317 LILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPE 365
+ + +AL+ +Y R V++A ++F+ M +RNL N ++ C G +
Sbjct: 147 MFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESK 195
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 32/224 (14%)
Query: 152 TFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM 211
TF ++ C + G + H +VI GF + V+++L+ +YA V VA LFD M
Sbjct: 114 TFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 212 LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFR 271
L D+NL N+++ F + +++
Sbjct: 174 L-------------------------------DRNLAVCNLLLRCFCQTGESKRLFEVYL 202
Query: 272 EMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM-FSRSSLILDTALIDMYCKC 330
M G+ N T ++ C + EG+ +H +++ ++ S++ + L+D Y C
Sbjct: 203 RMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSAC 262
Query: 331 RRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ + R F + ++++SWN+++ +GS D L LF +M
Sbjct: 263 GDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM 306
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 183/451 (40%), Gaps = 93/451 (20%)
Query: 107 RYFNNPLDTFCV--NTVISAYCKSH--DPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGN 162
R F LD V N ++S+Y + D + S + RF + +TF L+ +C
Sbjct: 198 RVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR- 256
Query: 163 TGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSM 222
I G++ HA + K + +PV +L++MYA
Sbjct: 257 ---IEQGKQIHAILFKVSYQFDIPVATALLNMYA-------------------------- 287
Query: 223 VDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
++ LS A F+ M +N+V+WN MI GF + A++LF +M L+ +
Sbjct: 288 -----KSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE 342
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T V+++C + + + E + V + + S L + +LI Y + + A F
Sbjct: 343 LTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHS 402
Query: 343 MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPD 402
+ +LVSW ++I HG E+ L +F+ M+ +LQPD
Sbjct: 403 IREPDLVSWTSVIGALASHGFAEESLQMFESMLQ---------------------KLQPD 441
Query: 403 EVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCL 462
++TF+ + G FK+MT+ + ++ H C+ +LL AG +DEA L
Sbjct: 442 KITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVL 501
Query: 463 RNM---------AKFDGDMS----RESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKN 509
+M A F G + RESM W AK L+++ P
Sbjct: 502 NSMPTEPSTHALAAFTGGCNIHEKRESMKWG------------------AKKLLEIEPTK 543
Query: 510 LACYQFLLIIYAVAAQWENVSTVQKLMKERR 540
Y L Y W + ++K +ERR
Sbjct: 544 PVNYSILSNAYVSEGHWNQAALLRK--RERR 572
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 57/284 (20%)
Query: 128 SHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPV 187
+H HL + R L + +F+ LI C ++ + +G + H ++K G +S
Sbjct: 120 NHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFP 179
Query: 188 QNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNL 247
SL+H Y CG + AR +F+++L D++L
Sbjct: 180 STSLVHFYGKCGLIVEARRVFEAVL-------------------------------DRDL 208
Query: 248 VTWNIMISGFLKARNPGYALKLFREMGSVG--LKGNATTMVCVVTACGRSARLKEGRSVH 305
V WN ++S ++ A L + MGS +G+ T +++AC R+++G+ +H
Sbjct: 209 VLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIH 264
Query: 306 GSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPE 365
+ ++ + + + TAL++MY K + A FE M RN+VSWNAMI+G +G
Sbjct: 265 AILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGR 324
Query: 366 DGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGI 409
+ + LF +M+ + LQPDE+TF +
Sbjct: 325 EAMRLFGQML--------------------LENLQPDELTFASV 348
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLK-----ARNPGYALKLFREMG 274
N ++ Y + + A LFD MP +N+VTWNI+I G ++ +
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 275 SVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVE 334
+ + + + ++ C S +K G +H +++ SS T+L+ Y KC +
Sbjct: 135 FTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIV 194
Query: 335 LATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDK 379
A RVFE + +R+LV WNA++ + ++G ++ L +++G DK
Sbjct: 195 EARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLL-KLMGSDK 238
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 131/554 (23%), Positives = 222/554 (40%), Gaps = 110/554 (19%)
Query: 108 YFNNPLDTF---------CVNTVISAY--CKSHDPHLAQVFYFRSLRFRFFPNSYTFVPL 156
Y NN LD F NT+IS C H+ + +F R+ P +TF L
Sbjct: 85 YLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIR--VFFDMQRWEIRPTEFTFSIL 142
Query: 157 IGSCGNTGCIVSGRKCHAQVIKNGFDSV-LPVQNSLIHMYADCGDVQVARVLFDSMLARD 215
C+ G + H I +G L V NS++ MY G A +F +M RD
Sbjct: 143 ---ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRD 199
Query: 216 LASWNSMVDGYLEAGDLSSAHALF------DVMPDKNLVTWNIMISGFLKARNPGY---- 265
+ SWN ++ ++G+ A F ++ PD+ V+ + I L+ + G
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALA 259
Query: 266 -----------------------------ALKLFREM---GSV---GLKGNATTMVC--- 287
++KLFRE+ SV + G+ + C
Sbjct: 260 LCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGED 319
Query: 288 ----VVTACGRSAR-----------------LKEGRSVHGSIIRMFSRSSLILDTALIDM 326
+ A +S R L G VH +I++ + T+L++M
Sbjct: 320 ALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEM 379
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
Y K V+LA VF + ++L+ WN +I+G + + L++F++++ +
Sbjct: 380 YFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLL----------M 429
Query: 387 DESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMA 446
++S L+PD VT +GI G F M G+ P H C+
Sbjct: 430 NQS---------LKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACII 480
Query: 447 NLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMY 506
LL G+++EA K + + F+ S +W +L D L E AK +++
Sbjct: 481 ELLCRVGMINEA-KDIADKIPFE----PSSHIWEPILCASLDLGDTRLAETVAKTMLESE 535
Query: 507 PKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRH 566
PK+ Y L+ IY + +WEN ++ M E +L GSS + ++ V +F+ + +
Sbjct: 536 PKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQI 595
Query: 567 EGIEAVNMMMDELA 580
G ++D L+
Sbjct: 596 HGGHDTCALLDLLS 609
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 142/325 (43%), Gaps = 29/325 (8%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+S F L+ + + HAQ+++ GF N + +Y G V A L
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD + ++ +WN + G + G L++A LFD MP++++V+WN MISG + Y +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 268 KLFREMGSVGLKGNATT--MVCVVTACGRSARLKEGRSVHG-SIIRMFSRSSLILDTALI 324
++F +M ++ T ++ + C R G +HG +I SR +L++ +++
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVR-----HGEQIHGNAICSGVSRYNLVVWNSVM 176
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
DMY + + A VF M +R++VSWN +IL G+ E L F M M+
Sbjct: 177 DMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREME------ 230
Query: 385 EIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWC 444
+QPDE T + G+ + G N L
Sbjct: 231 --------------IQPDEYTVSMVVSICSDLRELSKGKQALALCIKM-GFLSNSIVLGA 275
Query: 445 MANLLANAGLVDEAEKCLRNMAKFD 469
++ + +D++ K R + K+D
Sbjct: 276 GIDMFSKCNRLDDSVKLFRELEKWD 300
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 99 VDFTLLIFRYFNNPLDTFCVNTVISAY---CKSHDPHLAQVFYFRSLRFRFFPNSYTFVP 155
+D ++ +FR D+ N++I +Y C D A + ++ P+ +TF
Sbjct: 286 LDDSVKLFRELEK-WDSVLCNSMIGSYSWHCCGED---ALRLFILAMTQSVRPDKFTFSS 341
Query: 156 LIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARD 215
++ S N + G H+ VIK GFD V SL+ MY G V +A +F +D
Sbjct: 342 VLSSM-NAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKD 400
Query: 216 LASWNSMVDGYLEAGDLSSAHALFD-VMPDKNLVTWNIMISGFLKA------RNPGYALK 268
L WN+++ G + A+F+ ++ +++L + + G L A N G ++
Sbjct: 401 LIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEG--IQ 458
Query: 269 LFREMGSV-GLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
+F M G+ C++ R + E + + I
Sbjct: 459 IFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKI 499
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 198/473 (41%), Gaps = 49/473 (10%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFY--FRSLRFRFFPNSYTFVPLIGS--CGNTGCIVSGRK 171
+ N VIS Y + HD A + F +++F+ N T+ +I + C N G G
Sbjct: 193 YVANAVISMYGRCHDGAAAYEAWTVFEAIKFK---NLVTWNSMIAAFQCCNLGKKAIGVF 249
Query: 172 CHAQVIKNGFD--SVLPVQNSLI-------HMYADCGDVQVARVLFDSMLARDLASWNSM 222
GFD ++L + +SL + + C +Q+ + S L ++
Sbjct: 250 MRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCC-LQLHSLTVKSGLVTQTEVATAL 308
Query: 223 VDGYLEA-GDLSSAHALFDVMPD-KNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
+ Y E D + + LF M +++V WN +I+ F +P A+ LF ++ L
Sbjct: 309 IKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAF-AVYDPERAIHLFGQLRQEKLSP 367
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF 340
+ T V+ AC + S+H +I+ + +L+ +LI Y KC ++L RVF
Sbjct: 368 DWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVF 427
Query: 341 ERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQ 400
+ M +R++VSWN+M+ + +HG + L +F +M +
Sbjct: 428 DDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM-----------------------DIN 464
Query: 401 PDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEK 460
PD TFI + G F+ M + P H C+ ++L+ A EAE+
Sbjct: 465 PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEE 524
Query: 461 CLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMY-PKNLACYQFLLII 519
++ M M ++++W LL CR + LG+ A L ++ P N Y + I
Sbjct: 525 VIKQMP-----MDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNI 579
Query: 520 YAVAAQWENVSTVQKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAV 572
Y + + K M+ R+ P S ++ VH F + EAV
Sbjct: 580 YNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAV 632
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 124/290 (42%), Gaps = 57/290 (19%)
Query: 105 IFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTG 164
+F ++ D N +I+A+ +DP A + + + + P+ YTF ++ +C
Sbjct: 325 LFMEMSHCRDIVAWNGIITAF-AVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLV 383
Query: 165 CIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVD 224
HAQVIK GF + + NSLIH YA CG + + +FD M +RD+ SWNSM+
Sbjct: 384 TARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLK 443
Query: 225 GYLEAGDLSSAHALF---DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGN 281
Y G + S +F D+ PD
Sbjct: 444 AYSLHGQVDSILPVFQKMDINPD------------------------------------- 466
Query: 282 ATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILD----TALIDMYCKCRRVELAT 337
+ T + +++AC + R++EG + S MF + + +IDM + R A
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRS---MFEKPETLPQLNHYACVIDMLSRAERFAEAE 523
Query: 338 RVFERM-TNRNLVSWNAMILGHC-IHGSPEDGLSLFDEMVGMDKVKGEVE 385
V ++M + + V W A+ LG C HG+ G + DK+K VE
Sbjct: 524 EVIKQMPMDPDAVVWIAL-LGSCRKHGNTRLG------KLAADKLKELVE 566
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
N +++ Y + G++ A +FD MP++N+V+W +I+G+++A N LF M S
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFP 159
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATR- 338
N T+ V+T+C R + G+ VHG +++ S+ + A+I MY +C A
Sbjct: 160 -NEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEA 214
Query: 339 --VFERMTNRNLVSWNAMI 355
VFE + +NLV+WN+MI
Sbjct: 215 WTVFEAIKFKNLVTWNSMI 233
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 291 ACGRSARLKEGRSVHGSIIRM---FSRSSLILDTALIDMYCKCRRVELATRVFERMTNRN 347
AC L +G ++H ++ +S++ +IL LI+MY KC + A +VF+ M RN
Sbjct: 68 ACAEQRNLLDGINLHHHMLSHPYCYSQN-VILANFLINMYAKCGNILYARQVFDTMPERN 126
Query: 348 LVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+VSW A+I G+ G+ ++G LF M+
Sbjct: 127 VVSWTALITGYVQAGNEQEGFCLFSSML 154
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 45/246 (18%)
Query: 139 FRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADC 198
F S+ FPN +T ++ SC G++ H +K G + V N++I MY C
Sbjct: 150 FSSMLSHCFPNEFTLSSVLTSCRYE----PGKQVHGLALKLGLHCSIYVANAVISMYGRC 205
Query: 199 GDVQVAR---VLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNL----VTWN 251
D A +F+++ ++L +WNSM+ + A +F M + T
Sbjct: 206 HDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLL 265
Query: 252 IMISGFLKARN--PGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII 309
+ S K+ + P K ++ S+ +K T V TA +I
Sbjct: 266 NICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATA----------------LI 309
Query: 310 RMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN-RNLVSWNAMILGHCIHGSPEDGL 368
+++S +++ Y C ++F M++ R++V+WN +I ++ PE +
Sbjct: 310 KVYSE--------MLEDYTDC------YKLFMEMSHCRDIVAWNGIITAFAVY-DPERAI 354
Query: 369 SLFDEM 374
LF ++
Sbjct: 355 HLFGQL 360
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 33/262 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKC 172
+T ++I+A+ + A + FR ++ R N+ T V ++ +CG+ G ++ G++
Sbjct: 349 NTVTWTSIIAAHAREGFGEEA-ISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDL 232
HAQ+IKN + + + ++L+ +Y CG+ + A + + +RD+ SW +M+ G G
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
S AL +EM G++ N T + AC
Sbjct: 468 SE-------------------------------ALDFLKEMIQEGVEPNPFTYSSALKAC 496
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
S L GRS+H + + S++ + +ALI MY KC V A RVF+ M +NLVSW
Sbjct: 497 ANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWK 556
Query: 353 AMILGHCIHGSPEDGLSLFDEM 374
AMI+G+ +G + L L M
Sbjct: 557 AMIMGYARNGFCREALKLMYRM 578
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 110/228 (48%), Gaps = 32/228 (14%)
Query: 147 FPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV 206
F N FV L+ C GR+ H ++K G +++ V++SL++ YA CG+
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLI-VESSLVYFYAQCGE------ 233
Query: 207 LFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYA 266
L+SA FD+M +K++++W +IS + + A
Sbjct: 234 -------------------------LTSALRAFDMMEEKDVISWTAVISACSRKGHGIKA 268
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
+ +F M + N T+ ++ AC L+ GR VH +++ ++ + + T+L+DM
Sbjct: 269 IGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDM 328
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
Y KC + +VF+ M+NRN V+W ++I H G E+ +SLF M
Sbjct: 329 YAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIM 376
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 31/262 (11%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D VISA + A + L F PN +T ++ +C + GR+ H
Sbjct: 248 DVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVH 307
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
+ V+K M+ D+ S++D Y + G++S
Sbjct: 308 SLVVKR-------------------------------MIKTDVFVGTSLMDMYAKCGEIS 336
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+FD M ++N VTW +I+ + A+ LFR M L N T+V ++ ACG
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG 396
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
L G+ +H II+ ++ + + L+ +YCKC A V +++ +R++VSW A
Sbjct: 397 SVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTA 456
Query: 354 MILGHCIHGSPEDGLSLFDEMV 375
MI G G + L EM+
Sbjct: 457 MISGCSSLGHESEALDFLKEMI 478
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
Query: 220 NSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
N+++ + GDL A +FD MP+KN VTW MI G+LK A LF + G++
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 280 -GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATR 338
N VC++ C R A + GR VHG+++++ +LI++++L+ Y +C + A R
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKV-GVGNLIVESSLVYFYAQCGELTSALR 239
Query: 339 VFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
F+ M ++++SW A+I G + +F M+
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 31/146 (21%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN +T+ + +C N+ ++ GR H+ KN S + V ++LIHMYA CG V
Sbjct: 484 PNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFV------ 537
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
S A +FD MP+KNLV+W MI G+ + AL
Sbjct: 538 -------------------------SEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREAL 572
Query: 268 KLFREMGSVGLKGNATTMVCVVTACG 293
KL M + G + + +++ CG
Sbjct: 573 KLMYRMEAEGFEVDDYIFATILSTCG 598
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 183/438 (41%), Gaps = 58/438 (13%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N ++S + ++ A + R R + +T ++ +C + + G++ H
Sbjct: 149 DLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVH 208
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
A V+ G D V+ + ++I Y+ G + A +++S+
Sbjct: 209 AMVVVTGRDLVV-LGTAMISFYSSVGLINEAMKVYNSL---------------------- 245
Query: 234 SAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACG 293
+V D+ V N +ISG ++ RN A L + N + + C
Sbjct: 246 ------NVHTDE--VMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCS 292
Query: 294 RSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNA 353
++ L G+ +H +R S L L+DMY KC ++ A +F + ++++VSW +
Sbjct: 293 DNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTS 352
Query: 354 MILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCAD-RGVVRLQPDEVTFIGIXXX 412
MI + ++G L +F EM C + GV+ P+ VTF+ +
Sbjct: 353 MIDAYAVNGDGVKALEIFREM----------------CEEGSGVL---PNSVTFLVVISA 393
Query: 413 XXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDM 472
G+ F M + + L P H C ++L+ AG +E + + M + D +
Sbjct: 394 CAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEND-NQ 452
Query: 473 SRESMLWANLLALCRFRRDVYLGEQFA-KLLVDMYPKNLACYQFLLIIYAVAAQWENVST 531
S +W +L+ C D+ GE A +L+ + P+N + Y + YA +W+ V
Sbjct: 453 SIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEE 512
Query: 532 VQKLMKERRLGIIPGSSL 549
++ +K + L G SL
Sbjct: 513 LRGKLKNKGLVKTAGHSL 530
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 47/266 (17%)
Query: 85 LARTLLSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRF 144
L ++S S++ ++ + ++ N D +N++IS ++ + + F S
Sbjct: 221 LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRN--YKEAFLLMS--- 275
Query: 145 RFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVA 204
R PN + C + + G++ H ++NGF S + N L+ MY CG + A
Sbjct: 276 RQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQA 335
Query: 205 RVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG 264
R +F ++ ++ + SW SM+D Y GD
Sbjct: 336 RTIFRAIPSKSVVSWTSMIDAYAVNGDGVK------------------------------ 365
Query: 265 YALKLFREM---GSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT 321
AL++FREM GS G+ N+ T + V++AC + +KEG+ G M + L+ T
Sbjct: 366 -ALEIFREMCEEGS-GVLPNSVTFLVVISACAHAGLVKEGKECFG---MMKEKYRLVPGT 420
Query: 322 ----ALIDMYCKCRRVELATRVFERM 343
ID+ K E R+ ERM
Sbjct: 421 EHYVCFIDILSKAGETEEIWRLVERM 446
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 34/235 (14%)
Query: 127 KSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLP 186
+S +P+ + + R +S+TF P++G+C +GR+ HA +IK G ++
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 187 VQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKN 246
+ +LI MY+ G L DS+ +F+ + +K+
Sbjct: 121 SKTALIDMYSKYGH------LVDSV-------------------------RVFESVEEKD 149
Query: 247 LVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHG 306
LV+WN ++SGFL+ AL +F M ++ + T+ VV C L++G+ VH
Sbjct: 150 LVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHA 209
Query: 307 SIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM-TNRNLVSWNAMILGHCI 360
++ + R ++L TA+I Y + A +V+ + + + V N++I G CI
Sbjct: 210 MVV-VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISG-CI 262
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
Query: 233 SSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
+ A LFD +P ++L + N +S L++ NP L LF ++ ++ T V+ AC
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWN 352
+ + GR VH +I+ + + I TALIDMY K + + RVFE + ++LVSWN
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 353 AMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
A++ G +G ++ L +F M + VEI E
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAM-----YRERVEISE 185
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 29/232 (12%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
N+ TF L+ +C ++ G++ H + NG +S ++ L+HMY CG V+ A+ +F
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
D + ++ SWN+++ G +ISG + ++ L
Sbjct: 170 DESTSSNVYSWNALLRG--------------------------TVISGKKRYQD---VLS 200
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
F EM +G+ N ++ V + ++ L++G H I+ +S+ L T+L+DMY
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 329 KCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
KC +V LA RVF+ + R++V W AMI G + + L LF M+ +K+
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI 312
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 149 NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLF 208
N Y+ + S + G K HA IKNG + + ++ SL+ MY CG V +AR +F
Sbjct: 213 NVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVF 272
Query: 209 DSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
D ++ RD+ W +M+ G AH N W AL
Sbjct: 273 DEIVERDIVVWGAMIAGL--------AH---------NKRQWE--------------ALG 301
Query: 269 LFREMGS-VGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSR-SSLILDTALIDM 326
LFR M S + N+ + ++ G LK G+ VH +++ + + + LID+
Sbjct: 302 LFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDL 361
Query: 327 YCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGL 368
YCKC + RVF RN +SW A++ G+ +G + L
Sbjct: 362 YCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQAL 403
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 130/331 (39%), Gaps = 53/331 (16%)
Query: 130 DPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQN 189
D L + + + FR P+ T ++ C I G++ H +KN F + +
Sbjct: 400 DQALRSIVWMQQEGFR--PDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVT 457
Query: 190 SLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVT 249
SL+ MY+ CG V Y LFD + +N+
Sbjct: 458 SLMVMYSKCG-----------------------VPEY--------PIRLFDRLEQRNVKA 486
Query: 250 WNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII 309
W MI +++ + +++FR M + ++ TM V+T C LK G+ +HG I+
Sbjct: 487 WTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHIL 546
Query: 310 RMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLS 369
+ S + +I MY KC + A F+ + + ++W A+I + + D ++
Sbjct: 547 KKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAIN 606
Query: 370 LFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQM 429
F++MV RG P+ TF + +F M
Sbjct: 607 CFEQMV-----------------SRG---FTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Query: 430 TDVFGLKPNFAHLWCMANLLANAGLVDEAEK 460
++ L+P+ H + LL G V+EA++
Sbjct: 647 LRMYNLQPSEEHYSLVIELLNRCGRVEEAQR 677
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 145 RFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVA 204
+ +PNS ++ G+ + G++ HA V+K S V+ +H
Sbjct: 311 KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK----SKNYVEQPFVH----------- 355
Query: 205 RVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPG 264
+ ++D Y + GD++S +F +N ++W ++SG+
Sbjct: 356 ---------------SGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFD 400
Query: 265 YALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
AL+ M G + + T+ V+ C +K+G+ +H ++ ++ L T+L+
Sbjct: 401 QALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLM 460
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
MY KC E R+F+R+ RN+ +W AMI + + G+ +F M+
Sbjct: 461 VMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML 511
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 254 ISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFS 313
I F + N AL + + G+ NATT ++ AC R L G+ VH I
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 314 RSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSP--EDGLSLF 371
S+ L T L+ MY C V+ A +VF+ T+ N+ SWNA++ G I G +D LS F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 372 DEM--VGMD 378
EM +G+D
Sbjct: 203 TEMRELGVD 211
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 154/361 (42%), Gaps = 34/361 (9%)
Query: 118 VNTVISAYCKSHDPHLAQVFYFR-SLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQV 176
VN ++ +CK A F S + FFP+ YTF L+ G + + +
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA----SWNSMVDGYLEAGDL 232
++ G+D + NS+I G+V+ A + D M+ RD + ++N+++ + +
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
Query: 233 SSAHALFDVMPDKNLV----TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCV 288
A L V+ K ++ T+N +I G RN A++LF EM S G + + T +
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 289 VTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM----T 344
+ + +L E ++ + S+I LID +CK + A +F+ M
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 345 NRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEV 404
+RN V++N +I G C ED L D+M+ ++G+ +PD+
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI----MEGQ----------------KPDKY 541
Query: 405 TFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRN 464
T+ + + MT G +P+ + + L AG V+ A K LR+
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTS-NGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 465 M 465
+
Sbjct: 601 I 601
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 28/282 (9%)
Query: 114 DTFCVNTVISAYCKSHD----PHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSG 169
+T NT+IS CK + LA+V + + P+ TF LI C+
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGI----LPDVCTFNSLIQGL----CLTRN 415
Query: 170 RKCHAQVIKN----GFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNS 221
+ ++ + G + N LI G + A + M AR + ++N+
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 222 MVDGYLEAGDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVG 277
++DG+ +A A +FD M +N VT+N +I G K+R A +L +M G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 278 LKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELAT 337
K + T ++T R +K+ + ++ ++ LI CK RVE+A+
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 338 RVFE--RMTNRNLV--SWNAMILGHCIHGSPEDGLSLFDEMV 375
++ +M NL ++N +I G + ++LF EM+
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 113/264 (42%), Gaps = 12/264 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + N+VIS CK + A + + PN+ T+ LI + + +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
+ G + NSLI + +VA LF+ M ++ D ++N ++D
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 230 GDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G L A + M ++++T+N +I GF KA A ++F EM G+ N+ T
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ +S R+++ + +I + +L+ +C+ ++ A + + MT+
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 346 R----NLVSWNAMILGHCIHGSPE 365
++V++ +I G C G E
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVE 592
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 12/270 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D +TVI + CK A + P+ +T+ LI N G +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
+ +++ + + NSLI +A G + A LFD M+ R ++ ++NS+++G+
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 230 GDLSSAHALFDVMPDKN----LVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
L A +F +M K+ +VT+N +I+GF KA+ ++LFR+M GL GN T
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ +++ + V ++ +++ L+D CK ++E A VFE +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 346 R----NLVSWNAMILGHCIHGSPEDGLSLF 371
++ ++N M G C G EDG LF
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 120/275 (43%), Gaps = 12/275 (4%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQ 175
+ N +I+ C+ A + ++ + P+ T L+ + I Q
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGD 231
+++ G+ +L+H A L + M+ + DL ++ ++++G + G+
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 232 LSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVC 287
A L + M + ++V ++ +I K R+ AL LF EM + G++ + T
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 288 VVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR- 346
+++ R + + ++ +++ +LID + K ++ A ++F+ M R
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 347 ---NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMD 378
N+V++N++I G C+H ++ +F MV D
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 246 NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVH 305
NL T+NIMI+ + +AL + +M +G + T+ ++ R+ E ++
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 306 GSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIH 361
++ M + + T L+ + + A + ERM + +LV++ A+I G C
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 362 GSPEDGLSLFDEMVGMDKVKGEVEID 387
G P+ L+L ++M KG++E D
Sbjct: 219 GEPDLALNLLNKM-----EKGKIEAD 239
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 12/265 (4%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
NT+I A C + + A + PN T+ LI N G + + +I+
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSS 234
+ + ++LI + G + A L+D M+ R D+ +++S+++G+ L
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 235 AHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
A +F++M K N+VT+N +I GF KA+ ++LFREM GL GN T ++
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR---- 346
++ + V ++ ++ + L+D C +VE A VFE +
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 347 NLVSWNAMILGHCIHGSPEDGLSLF 371
++ ++N MI G C G EDG LF
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 152/390 (38%), Gaps = 68/390 (17%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQ 175
+ + +I+ +C+ LA + ++ + P+ T L+ + I Q
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGD 231
+++ G+ N+LIH A L D M+ + DL ++ +V+G + GD
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 232 LSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM-- 285
+ A +L M + +V +N +I +N AL LF EM + G++ N T
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 286 ----VC-----------------------------VVTACGRSARLKEGRSVHGSIIRMF 312
+C ++ A + +L E ++ +I+
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 313 SRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGL 368
+ ++LI+ +C R++ A +FE M ++ N+V++N +I G C ++G+
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 369 SLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQ 428
LF EM + RG+V + VT+ + + FKQ
Sbjct: 417 ELFREM-----------------SQRGLV---GNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 429 MTDVFGLKPNFAHLWCMANLLANAGLVDEA 458
M G+ P+ + + L N G V+ A
Sbjct: 457 MVSD-GVLPDIMTYSILLDGLCNNGKVETA 485
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D F +++I+ +C A+ + + FPN T+ LI + G +
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++ + G +LIH + + A+++F M++ D+ +++ ++DG
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 230 GDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G + +A +F+ + + ++ T+NIMI G KA LF + G+K N T
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 286 VCVVTACGRSARLKE 300
+++ R LKE
Sbjct: 540 TTMMSGFCRKG-LKE 553
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC-HAQVI 177
NT+I +CK+ + + N+ T+ LI R+C +AQ++
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG------FFQARECDNAQIV 453
Query: 178 KNGF--DSVLP---VQNSLIHMYADCGDVQVARVLFD----SMLARDLASWNSMVDGYLE 228
D VLP + L+ + G V+ A V+F+ S + D+ ++N M++G +
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 229 AGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
AG + LF + K N+VT+ M+SGF + A LFREM G ++ T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 285 MVCVVTACGRSARLKEG-RSVHGSIIRMFSRSSLILDTALIDM 326
++ A L++G ++ +IR + D + I +
Sbjct: 574 YNTLI-----RAHLRDGDKAASAELIREMRSCRFVGDASTIGL 611
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 12/270 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D NT+I CK A + P+ +T+ LI N G +
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
+ +I+ + + ++LI + G + A L+D M+ R D+ +++S+++G+
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
L A +F++M K N+VT++ +I GF KA+ ++LFREM GL GN T
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ ++ + V ++ + +++ L+D CK ++ A VFE +
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 346 R----NLVSWNAMILGHCIHGSPEDGLSLF 371
++ ++N MI G C G EDG LF
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 128/273 (46%), Gaps = 12/273 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D F +++IS C A + + PN TF LI + G +V K +
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARD----LASWNSMVDGYLEA 229
++IK D + +SLI+ + + A+ +F+ M+++D + ++++++ G+ +A
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
+ LF M + N VT+ +I GF +AR+ A +F++M SVG+ N T
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ ++ +L + V + R + +I+ CK +VE +F ++
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 346 R----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ N++++N MI G C GS E+ SL +M
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/453 (20%), Positives = 186/453 (41%), Gaps = 50/453 (11%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D ++++++ YC S A + + + P+++TF LI G + +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI-----HGLFLHNKASE 206
Query: 174 A-----QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVD 224
A Q+++ G L ++++ GD+ +A L M + D+ +N+++D
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 225 GYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
G + + A LF M +K ++ T++ +IS A +L +M +
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF 340
N T ++ A + +L E ++ +I+ + ++LI+ +C R++ A +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 341 ERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGV 396
E M ++ N+V+++ +I G C E+G+ LF EM + RG+
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-----------------SQRGL 429
Query: 397 VRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVD 456
V + VT+ + + FKQM V G+ PN + + L G +
Sbjct: 430 V---GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLA 485
Query: 457 EAEKCLRNMAK--FDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVDMYPKNLACYQ 514
+A + + + D+ +++ + +C+ + E F L + N+ Y
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIM---IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 515 FLLIIYAVAAQWENVSTVQKLMKERRLGIIPGS 547
++ + E ++ K MKE G +P S
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKED--GPLPNS 573
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 109/274 (39%), Gaps = 47/274 (17%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + + I+ +C+ LA + ++ + P+ T L+ ++ I
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
Q+++ G+ +LIH A L D M+ R DL ++ ++V+G +
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 230 GDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
GD+ A +L M + ++V +N +I G K ++ AL LF EM + G++ + T
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF----E 341
++LI C R A+R+ E
Sbjct: 297 -----------------------------------SSLISCLCNYGRWSDASRLLSDMIE 321
Query: 342 RMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
R N N+V+++A+I G + L+DEM+
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 12/265 (4%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
+TVI + CK A + PN T+ LI N + + +I+
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSS 234
+ + N+LI + G + A L+D M+ R D+ +++S+++G+ L
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 235 AHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
A +F++M K N+VT+N +I+GF KA+ ++LFREM GL GN T ++
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR---- 346
++ + V ++ +++ L+D CK ++E A VFE +
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 347 NLVSWNAMILGHCIHGSPEDGLSLF 371
+ ++N MI G C G EDG LF
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLF 528
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 118/239 (49%), Gaps = 12/239 (5%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN TF LI + G +V K + ++IK D + +SLI+ + + A+ +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 208 FDSMLARD----LASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLK 259
F+ M+++D + ++N++++G+ +A + LF M + N VT+ +I GF +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
AR+ A +F++M S G+ N T ++ ++ +L++ V + R ++
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 320 DTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+I+ CK +VE +F ++ + +++ +N MI G C G E+ +LF +M
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 47/308 (15%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
+ + N +I+ +C+ LA + ++ + P+ T L+ + I
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
Q+++ G+ +LIH A L D M+ R +L ++ +V+G +
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 230 GDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
GD+ A L + M + N+V ++ +I K R+ AL LF EM + G++ N T
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 286 VCVVTACGRSAR------------------------------LKEGRSVHGSII--RMFS 313
+++ R +KEG+ V + M
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 314 RS---SLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPED 366
RS + ++LI+ +C R++ A +FE M ++ N+V++N +I G C ++
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 367 GLSLFDEM 374
G+ LF EM
Sbjct: 419 GVELFREM 426
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 116/277 (41%), Gaps = 13/277 (4%)
Query: 112 PLDT-FCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGR 170
PL + F N ++SA K L + R N YT+ LI I
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 171 KCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGY 226
+++K G++ + +SL++ Y + A L D M+ D ++ +++ G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 227 LEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
S A AL D M + NLVT+ ++++G K + A L +M + ++ N
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF-- 340
V+ + + + ++ + R ++I ++LI C R A+R+
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 341 --ERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
ER N N+V++NA+I G + L+DEM+
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 130/314 (41%), Gaps = 55/314 (17%)
Query: 114 DTFCVNTVISAYCKSHDP----HLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSG 169
D +TV++ YC+ + L +V + L+ PNSY + +IG +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK----PNSYIYGSIIGLLCRICKLAEA 335
Query: 170 RKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA----SWNSMVDG 225
+ +++I+ G V +LI + GD++ A F M +RD+ ++ +++ G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 226 YLEAGDLSSAHALFDVM------PDK---------------------------------N 246
+ + GD+ A LF M PD N
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 247 LVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHG 306
+VT+ +I G K + A +L EM +GL+ N T +V +S ++E + G
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 307 SIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIHG 362
+ + T L+D YCK ++ A + + M + L V++N ++ G C+HG
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 363 SPEDGLSLFDEMVG 376
EDG L + M+
Sbjct: 576 MLEDGEKLLNWMLA 589
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 130/310 (41%), Gaps = 47/310 (15%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT T+I +CK D A F++ P+ T+ +I G +V K
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSML----ARDLASWNSMVDGYLEA 229
++ G + LI+ Y G ++ A + + M+ + ++ ++ +++DG +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 230 GDLSSA----HALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
GDL SA H ++ + N+ T+N +++G K+ N A+KL E + GL + T
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 286 VCVVTACGRSAR-------LKE--GRSVHGSIIRM------FSRSSLILD---------- 320
++ A +S LKE G+ + +I+ F ++ D
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 321 ----------TALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIHGSPED 366
+L+ YC ++ AT +++ M +R + ++ ++ GHC + ++
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 367 GLSLFDEMVG 376
LF EM G
Sbjct: 650 AWFLFQEMKG 659
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 125/319 (39%), Gaps = 38/319 (11%)
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNS---LIHMYADCGDVQVARVLFDSM----LARDL 216
G + R+ +++ G VL V + L + DC A ++F + ++
Sbjct: 189 GLLREARRVFEKMLNYGL--VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNV 246
Query: 217 ASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFRE 272
AS+N ++ + G + AH L +M K ++++++ +++G+ + KL
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 273 MGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRR 332
M GLK N+ ++ R +L E +IR ++ T LID +CK
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 333 VELATRVFERMTNRNL----VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
+ A++ F M +R++ +++ A+I G C G + LF EM KG
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF----CKG------ 416
Query: 389 SPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANL 448
L+PD VTF + M G PN + +
Sbjct: 417 ----------LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDG 465
Query: 449 LANAGLVDEAEKCLRNMAK 467
L G +D A + L M K
Sbjct: 466 LCKEGDLDSANELLHEMWK 484
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 8/176 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT T++ AYCKS + AQ L P TF L+ G + G K
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++ G NSL+ Y +++ A ++ M +R D ++ ++V G+ +A
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGN 281
++ A LF M K ++ T++++I GFLK + A ++F +M GL +
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 130/314 (41%), Gaps = 55/314 (17%)
Query: 114 DTFCVNTVISAYCKSHDP----HLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSG 169
D +TV++ YC+ + L +V + L+ PNSY + +IG +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK----PNSYIYGSIIGLLCRICKLAEA 335
Query: 170 RKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA----SWNSMVDG 225
+ +++I+ G V +LI + GD++ A F M +RD+ ++ +++ G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 226 YLEAGDLSSAHALFDVM------PDK---------------------------------N 246
+ + GD+ A LF M PD N
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 247 LVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHG 306
+VT+ +I G K + A +L EM +GL+ N T +V +S ++E + G
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 307 SIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIHG 362
+ + T L+D YCK ++ A + + M + L V++N ++ G C+HG
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 363 SPEDGLSLFDEMVG 376
EDG L + M+
Sbjct: 576 MLEDGEKLLNWMLA 589
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 130/310 (41%), Gaps = 47/310 (15%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT T+I +CK D A F++ P+ T+ +I G +V K
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSML----ARDLASWNSMVDGYLEA 229
++ G + LI+ Y G ++ A + + M+ + ++ ++ +++DG +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 230 GDLSSA----HALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
GDL SA H ++ + N+ T+N +++G K+ N A+KL E + GL + T
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 286 VCVVTACGRSAR-------LKE--GRSVHGSIIRM------FSRSSLILD---------- 320
++ A +S LKE G+ + +I+ F ++ D
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 321 ----------TALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIHGSPED 366
+L+ YC ++ AT +++ M +R + ++ ++ GHC + ++
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 367 GLSLFDEMVG 376
LF EM G
Sbjct: 650 AWFLFQEMKG 659
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 125/319 (39%), Gaps = 38/319 (11%)
Query: 164 GCIVSGRKCHAQVIKNGFDSVLPVQNS---LIHMYADCGDVQVARVLFDSM----LARDL 216
G + R+ +++ G VL V + L + DC A ++F + ++
Sbjct: 189 GLLREARRVFEKMLNYGL--VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNV 246
Query: 217 ASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFRE 272
AS+N ++ + G + AH L +M K ++++++ +++G+ + KL
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 273 MGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRR 332
M GLK N+ ++ R +L E +IR ++ T LID +CK
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 333 VELATRVFERMTNRNL----VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDE 388
+ A++ F M +R++ +++ A+I G C G + LF EM KG
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF----CKG------ 416
Query: 389 SPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANL 448
L+PD VTF + M G PN + +
Sbjct: 417 ----------LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDG 465
Query: 449 LANAGLVDEAEKCLRNMAK 467
L G +D A + L M K
Sbjct: 466 LCKEGDLDSANELLHEMWK 484
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 8/176 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT T++ AYCKS + AQ L P TF L+ G + G K
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++ G NSL+ Y +++ A ++ M +R D ++ ++V G+ +A
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGN 281
++ A LF M K ++ T++++I GFLK + A ++F +M GL +
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 152/382 (39%), Gaps = 49/382 (12%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT + V++ C + LA + + R + YT+ ++ S G I RK
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++ + G + +LIH Y V A LF++ML+ ++ ++++++DG+ +A
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 230 GDLSSAHALFDVM------PD--------------KNLVTWNIMISGFLKARNPGYALKL 269
G + A +F+ M PD N+VT+ ++ GF K+ A KL
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 270 FREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCK 329
M G + N ++ + +L E + V + ++L ++LID Y K
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 330 CRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVE 385
+R +LA++V +M N+V + MI G C G ++ L M
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM----------- 770
Query: 386 IDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCM 445
+E C QP+ VT+ + ++M G+ PN+ +
Sbjct: 771 -EEKGC--------QPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVL 820
Query: 446 ANLLANAGLVDEAEKCLRNMAK 467
+ G +D A L M +
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQ 842
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 122/292 (41%), Gaps = 38/292 (13%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGS-CG-----NTGCIVSGRKC 172
N+++ AYC S D A + ++ P + LIGS CG N + K
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 173 HAQVIKNGFDSVLPVQN--SLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGY 226
+++++ G VL N S G + A + M+ + D ++++ +++
Sbjct: 436 YSEMLAAGV--VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 227 LEAGDLSSAHALFDVMPDKNLV----TWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
A + A LF+ M LV T+ IM+ F KA A K F EM VG N
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T ++ A ++ ++ + +++ +++ +ALID +CK +VE A ++FER
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 343 MTNR--------------------NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
M N+V++ A++ G C E+ L D M
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 123/302 (40%), Gaps = 47/302 (15%)
Query: 121 VISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNG 180
++ +CKSH A+ PN + LI G + ++ ++ ++G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 181 FDSVLPVQNSLIHMYADCGDVQVARVLFDSML----ARDLASWNSMVDGYLEAGDLSSAH 236
F + L +SLI Y +A + ML A ++ + M+DG + G A+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 237 ALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
L +M +K N+VT+ MI GF L+L MGS G+ N T ++ C
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 293 GRSARL-------KEGRSVHG--------SIIRMFSRS---SLIL-------DTA----- 322
++ L +E + H +I F++ SL L DTA
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSV 884
Query: 323 ---LIDMYCKCRRVELATRVFERMT--NRNLV----SWNAMILGHCIHGSPEDGLSLFDE 373
LID K +R+E+A R+ E + + LV ++N++I C+ E LF E
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Query: 374 MV 375
M
Sbjct: 945 MT 946
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 120/239 (50%), Gaps = 12/239 (5%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ +TF LI + G +V K + +++K D + +SLI+ + + A+ +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 208 FDSMLAR----DLASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLK 259
F+ M+++ D+ ++N+++ G+ + + +F M + N VT+NI+I G +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
A + A ++F+EM S G+ N T ++ ++ +L++ V + R ++
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 320 DTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+I+ CK +VE +F ++ + ++V++N MI G C GS E+ +LF EM
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 143/336 (42%), Gaps = 50/336 (14%)
Query: 89 LLSRASNLCGVDFTLLIFRYFNN---PLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR 145
LLS + + D + + N P + + + +I+ +C+ LA + ++
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 146 FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVAR 205
+ PN T L+ ++ I Q+ G+ N+LIH A
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 206 VLFDSMLAR----DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNL----VTWNIMISGF 257
L D M+A+ DL ++ +V+G + GD A L + M L + +N +I G
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 258 LKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC---GR-------------------- 294
K ++ AL LF+EM + G++ N T +++ GR
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 295 -------SARLKEGRSVHGSII--RMFSRS---SLILDTALIDMYCKCRRVELATRVFER 342
A +KEG+ V + M RS S++ ++LI+ +C R++ A ++FE
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 343 MTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
M ++ ++V++N +I G C + E+G+ +F EM
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D NT+I +CK + FR + R N+ T+ LI G ++
Sbjct: 395 DVVTYNTLIKGFCKYKRVE-EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFD----SMLARDLASWNSMVDGYLE 228
+++ +G + N+L+ G ++ A V+F+ S + + ++N M++G +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 229 AGDLSSAHALF------DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
AG + LF V PD +V +N MISGF + + A LF+EM G N+
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPD--VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 283 TTMVCVVTACGRSARLKEG-RSVHGSIIRMFSRSSLILDTALIDM 326
++ ARL++G R +I+ D + I +
Sbjct: 572 GCYNTLI-----RARLRDGDREASAELIKEMRSCGFAGDASTIGL 611
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 9/257 (3%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
LD ++ I Y KS D A V Y R L PN T+ LI G I
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLE 228
+ Q++K G + + +SLI + CG+++ L++ M+ D+ + +VDG +
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 229 AGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
G + A M + N+V +N +I G+ + ALK+FR MG G+K + T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
V+ RL+E + + +M + LID +CK + + ++F+ M
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM- 592
Query: 345 NRNLVSWNAMILGHCIH 361
RN +S + + IH
Sbjct: 593 QRNKISADIAVCNVVIH 609
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 12/254 (4%)
Query: 134 AQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIH 193
A +FR + P++ + LI + G + + +N + + V N +IH
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 194 MYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEAGDLSSAHALFDVMP----DK 245
+ C ++ A F+++ + D+ ++N+M+ GY L A +F+++
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 246 NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVH 305
N VT I+I K + A+++F M G K NA T C++ +S ++ +
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 306 GSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIH 361
+ S++ + +ID CK RV+ AT +F + + L V++ +I G+C
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789
Query: 362 GSPEDGLSLFDEMV 375
G + L++ M+
Sbjct: 790 GRLVEAALLYEHML 803
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 118/275 (42%), Gaps = 14/275 (5%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHA 174
TFC T+I+ +CK + A + + P+ + LI G + G K +
Sbjct: 288 TFC--TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 175 QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAG 230
Q + G + V +S I +Y GD+ A V++ ML + ++ ++ ++ G + G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 231 DLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMV 286
+ A ++ + + ++VT++ +I GF K N L+ +M +G +
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 287 CVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM--- 343
+V + + ++ R ++++ +LID +C+ R + A +VF M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 344 -TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGM 377
++ ++ ++ + G E+ L LF M M
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 156/371 (42%), Gaps = 69/371 (18%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
NTVI+ CK+ D + A ++ + ++ T+ LI N+G + ++K
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA----SWNSMVDGYLEAGDLSS 234
D + +LI + G++ AR L+ M+ R + ++NS+++G+ G L
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 235 AHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
A +FD+M K ++VT+N +I+GF K++ +KLF EM GL G+A T
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY----- 362
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN----R 346
LI YC+ ++ +A +VF RM +
Sbjct: 363 ------------------------------NTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 347 NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTF 406
++V++N ++ C +G E L + +++ K E+++ D +T+
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDL-----QKSEMDV---------------DIITY 432
Query: 407 IGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMA 466
I F+ +T G+KP+ M + L GL EA+K R M
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRK-GVKPDAIAYITMISGLCRKGLQREADKLCRRM- 490
Query: 467 KFDGDMSRESM 477
K DG M E +
Sbjct: 491 KEDGFMPSERI 501
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 191 LIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSSAHALFDVMPD-- 244
LIH + C + +A L M+ + + S+++G+ + A +L D M
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 245 --KNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGR 302
N+V +N +I+G K R+ AL++F M G++ +A T +++ S R +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 303 SVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGH 358
+ +++ ++I TALID + K + A +++ M R N+ ++N++I G
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 359 CIHGSPEDGLSLFDEMV 375
CIHG D +FD MV
Sbjct: 300 CIHGCLGDAKYMFDLMV 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 142/328 (43%), Gaps = 38/328 (11%)
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEA 229
+++K GF + SL++ + Q A L DSM ++ +N++++G +
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 230 GDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
DL++A +F M K + VT+N +ISG + A +L R+M + N
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ + L E R+++ +IR ++ +LI+ +C + A +F+ M +
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 346 R----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQP 401
+ ++V++N +I G C EDG+ LF EM +G+V
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-----------------TYQGLV---G 357
Query: 402 DEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKC 461
D T+ + + F +M D G+ P+ + + L N G +++A
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC-GVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 462 LRNMAKFDGDMSRESMLWANLL--ALCR 487
+ ++ K + D+ ++ N++ LCR
Sbjct: 417 VEDLQKSEMDV---DIITYNIIIQGLCR 441
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
+ F N++I+ +C A+ + + FP+ T+ LI + + G K
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSML----ARDLASWNSMVDGYLEA 229
++ G N+LIH Y G + VA+ +F+ M+ + D+ ++N ++D
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 230 GDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G + A + + + D +++T+NI+I G + A LFR + G+K +A
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 286 VCVVTACGRSARLKEG 301
+ +++ R +E
Sbjct: 468 ITMISGLCRKGLQREA 483
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 128/305 (41%), Gaps = 47/305 (15%)
Query: 114 DTFCVNTVISAYCKSHDPHL--------------AQVFYFRSL------------RFRFF 147
D F TV++ CK D L A V + ++ F
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 148 ---------PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADC 198
PN T+ LI N G + + +I+ + + ++LI +
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 199 GDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTW 250
G + A L+D M+ R D+ +++S+++G+ L A +F++M K N+VT+
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 251 NIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIR 310
N +I GF KA+ ++LFREM GL GN T ++ ++ + + ++
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 311 MFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPED 366
+I + L+D CK ++E A VFE + ++ ++N MI G C G ED
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 367 GLSLF 371
G LF
Sbjct: 519 GWDLF 523
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 114/239 (47%), Gaps = 12/239 (5%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN TF LI + G +V K + ++IK D + +SLI+ + + A+ +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 208 FDSMLARD----LASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLK 259
F+ M+++D + ++N+++ G+ +A + LF M + N VT+N +I G +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
A + A K+F++M S G+ + T ++ + +L++ V + + +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 320 DTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+I+ CK +VE +F ++ + N++ + MI G C G E+ +LF EM
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 16/218 (7%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
NT+I +CK+ FR + R N+ T+ LI G +K +++
Sbjct: 399 NTLIKGFCKAKRVEEGMEL-FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFD----SMLARDLASWNSMVDGYLEAGDLS 233
+G + + L+ G ++ A V+F+ S + D+ ++N M++G +AG +
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 234 SAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
LF + K N++ + MISGF + A LFREM G N+ T ++
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 290 TACGRSARLKEG-RSVHGSIIRMFSRSSLILDTALIDM 326
ARL++G ++ +I+ + D + I M
Sbjct: 578 -----RARLRDGDKAASAELIKEMRSCGFVGDASTISM 610
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 85/199 (42%), Gaps = 8/199 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D F +++I+ +C A+ + + FPN T+ LI + G +
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++ + G N+LI GD +A+ +F M++ D+ +++ ++DG +
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 230 GDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G L A +F+ + + ++ T+NIMI G KA LF + G+K N
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 286 VCVVTACGRSARLKEGRSV 304
+++ R +E ++
Sbjct: 539 TTMISGFCRKGLKEEADAL 557
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 18/265 (6%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
LD ++ I Y KS D A V Y R L PN T+ LI G I
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLE 228
+ Q++K G + + +SLI + CG+++ L++ M+ D+ + +VDG +
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 229 AGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
G + A M + N+V +N +I G+ + ALK+FR MG G+K + T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 285 MVCVV-TACGRSARLKEGRSVHG-SIIRMFSRSSLILDTA----LIDMYCKCRRVELATR 338
V+ + A K + G + + R+ + D A +I + KC R+E A++
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 339 VF----ERMTNRNLVSWNAMILGHC 359
F E ++V++N MI G+C
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMICGYC 618
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 117/278 (42%), Gaps = 20/278 (7%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHA 174
TFC T+I+ +CK + A + + P+ + LI G + G K +
Sbjct: 288 TFC--TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 175 QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAG 230
Q + G + V +S I +Y GD+ A V++ ML + ++ ++ ++ G + G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 231 DLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMV 286
+ A ++ + + ++VT++ +I GF K N L+ +M +G +
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 287 CVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM--- 343
+V + + ++ R ++++ +LID +C+ R + A +VF M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 344 -------TNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
T ++ + M C H P GL LFD M
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEAGDLS 233
+N + + V N +IH+ C ++ A F+++ + D+ ++N+M+ GY L
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 624
Query: 234 SAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
A +F+++ N VT I+I K + A+++F M G K NA T C++
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL- 348
+S ++ + + S++ + +ID CK RV+ AT +F + + L
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 744
Query: 349 ---VSWNAMILGHCIHGSPEDGLSLFDEMV 375
V++ +I G+C G + L++ M+
Sbjct: 745 PDVVAYAILIRGYCKVGRLVEAALLYEHML 774
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 16/272 (5%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVF-YFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRK 171
D NT+I + CK H+ F+ + + PN T+ LI + G +
Sbjct: 259 DVVIFNTIIDSLCKYR--HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYL 227
+ +I+ + L N+LI + G A L+D M+ R D+ ++NS+V+G+
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 228 EAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
L A +F+ M K ++VT+N +I GF K++ +LFREM GL G+
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
T ++ + V ++ ++ + L+D C ++E A VF+ M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 344 TNR----NLVSWNAMILGHCIHGSPEDGLSLF 371
++ + MI G C G +DG LF
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 112/239 (46%), Gaps = 12/239 (5%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN TF LI + G V K + +IK D + NSL++ + + A+ +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 208 FDSMLARD----LASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV----TWNIMISGFLK 259
F+ M+++D + ++N+++ G+ ++ + LF M + LV T+ +I G
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
+ A K+F++M S G+ + T ++ + +L++ V + + + + +
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 320 DTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
T +I+ CK +V+ +F ++ + N+V++N MI G C ++ +L +M
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 131/342 (38%), Gaps = 82/342 (23%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQ 175
+ N +I+ +C+ LA + ++ + P+ T L+ + I Q
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGD 231
+++ G+ +LIH A L D M+ R +L ++ +V+G + GD
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 232 LSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT--- 284
A L + M + ++V +N +I K R+ AL LF+EM + G++ N T
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 285 MVCVVTACGR---------------------------SARLKEGRSVHGSII-------- 309
++ + + GR A +KEG+ V +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 310 ---RMFSRSSLI--------LDTA---------------------LIDMYCKCRRVELAT 337
+F+ +SL+ LD A LI +CK +RVE T
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 338 RVFERMTNRNL----VSWNAMILGHCIHGSPEDGLSLFDEMV 375
+F M++R L V++ +I G G ++ +F +MV
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D NT+I +CKS FR + R ++ T+ LI + G + +K
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTEL-FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLE 228
Q++ +G + + L+ + G ++ A +FD M + D+ + +M++G +
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 229 AGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
AG + LF + K N+VT+N MISG R A L ++M G N+ T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 285 MVCVVTACGRSARLKEG-RSVHGSIIRMFSRSSLILDTALIDM 326
++ A L++G ++ +IR + D + I +
Sbjct: 578 YNTLI-----RAHLRDGDKAASAELIREMRSCRFVGDASTIGL 615
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 153/354 (43%), Gaps = 38/354 (10%)
Query: 121 VISAYCK--SHDPHLAQVFYFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
VI + CK S D L+ F + + + T+ LIG N G G K ++I
Sbjct: 251 VIDSLCKDGSFDDALS---LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA----SWNSMVDGYLEAGDLS 233
+ ++LI ++ G + A+ L++ M+ R +A ++NS++DG+ + L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 234 SAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
A+ +FD+M K ++VT++I+I+ + KA+ ++LFRE+ S GL N T +V
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLV 349
+S +L + + ++ S++ L+D C + A +FE+M +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 350 ----SWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVT 405
+N +I G C +D SLF + +D+GV +PD VT
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSL-----------------SDKGV---KPDVVT 527
Query: 406 FIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAE 459
+ + F++M + +F + + L +GL+ E
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 22/279 (7%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + + +I+ YC+ A R+ + + P++ TF L+ G + GR
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV-----NGFCLEGRVSE 158
Query: 174 AQVIKNGFDSV-----LPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVD 224
A + + + L ++LI+ G V A VL D M+ D ++ +++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 225 GYLEAGDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
++G+ + A LF M ++N+ V ++I+I K + AL LF EM G+K
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF 340
+ T ++ + +G + +I ++ +ALID++ K ++ A ++
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 341 ERMTNRNL----VSWNAMILGHCIHGSPEDGLSLFDEMV 375
M R + +++N++I G C + +FD MV
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/371 (19%), Positives = 151/371 (40%), Gaps = 43/371 (11%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT +T+++ +C A R + + P+ T LI G + GR
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI-----NGLCLKGRVSE 193
Query: 174 AQV-----IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLAS----WNSMVD 224
A V ++ GF +++ G+ +A LF M R++ + ++ ++D
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 225 GYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
+ G A +LF+ M K ++VT++ +I G K+ REM +
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF 340
+ T ++ + +L E + ++ +I I +LID +CK + A ++F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 341 ERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGV 396
+ M ++ ++V+++ +I +C +DG+ LF E+ + +G+
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI-----------------SSKGL 416
Query: 397 VRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVD 456
+ P+ +T+ + + F++M G+ P+ + + L + G ++
Sbjct: 417 I---PNTITYNTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELN 472
Query: 457 EAEKCLRNMAK 467
+A + M K
Sbjct: 473 KALEIFEKMQK 483
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 16/276 (5%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLI-GSC-GNTGCIVSGRK 171
D + N +++ +C+S P+LA F + ++ F P+ TF LI G C GN +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR--MEEAMS 163
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYL 227
Q+++ G + + ++I G V A LFD M + D+ + S+V+G
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 228 EAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
+G A +L M + +++T+N +I F+K A +L+ EM + + N
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
T ++ + E R + + ++ T+LI+ +CKC++V+ A ++F M
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 344 TNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+ + N +++ +I G G P +F MV
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 119/276 (43%), Gaps = 15/276 (5%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D T+I + CK+ + A + + + P+ + L+ N+G
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSML----ARDLASWNSMVDGYLEA 229
+ K + N+LI + G A L++ M+ A ++ ++ S+++G+
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G + A +F +M K ++V + +I+GF K + A+K+F EM GL GN T
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ G+ + + V ++ ++ L+ C +V+ A +FE M
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 346 R-------NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
R N+ ++N ++ G C +G E L +F++M
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 246 NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVH 305
+L T N++++ F ++ P A +M +G + + T ++ R++E S+
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 306 GSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIH 361
++ M + +++ T +ID CK V A +F++M N ++V + +++ G C
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 362 GSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXX 421
G D SL + GM K K ++PD +TF +
Sbjct: 226 GRWRDADSL---LRGMTKRK-----------------IKPDVITFNALIDAFVKEGKFLD 265
Query: 422 GRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEK 460
+ +M + + PN + N G VDEA +
Sbjct: 266 AEELYNEMIRM-SIAPNIFTYTSLINGFCMEGCVDEARQ 303
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 37/359 (10%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
+ + NT+I+AY K D + + N T+ L+ G + K
Sbjct: 258 EAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLF 317
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA----SWNSMVDGYLEA 229
++ + G +S + V SLI G+++ A +LFD + + L+ ++ +++DG +
Sbjct: 318 DEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKV 377
Query: 230 GDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G++ +A L + M K + V +N +I G+ + A ++ M G + + T
Sbjct: 378 GEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTC 437
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
+ + R R E + ++ + S + T LID+YCK VE A R+F M++
Sbjct: 438 NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 346 R----NLVSWNAMILGHCIHGSPEDGLSLFDEMV--GMDKVKGEVEIDESPCADRGVVRL 399
+ N +++N MI +C G ++ L M GMD
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMD--------------------- 536
Query: 400 QPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEA 458
PD T+ + F +M + GL N M + L+ AG DEA
Sbjct: 537 -PDSYTYTSLIHGECIADNVDEAMRLFSEM-GLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 12/273 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D ++IS C+ + A + + P+SYT+ LI G + +
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++ G + V N+LI Y G V A +++D M + D+ + N++ +
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 230 GDLSSAHA-LFDVMPDK---NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
A LF +M + V++ +I + K N A +LF EM S G++ NA T
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY 507
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM-- 343
++ A + ++KE R + ++ T+LI C V+ A R+F M
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGL 567
Query: 344 --TNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
++N V++ MI G G ++ L+DEM
Sbjct: 568 KGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D F NT+ S + + A+ + FR + ++ ++ LI G + ++
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++ G N +I+ Y G ++ AR L +M A D ++ S++ G A
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA 552
Query: 230 GDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVG 277
++ A LF M D+N VT+ +MISG KA A L+ EM G
Sbjct: 553 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 22/222 (9%)
Query: 98 GVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLI 157
GV+ T ++F NT+I YC+ A + Y + F + +T I
Sbjct: 394 GVNITQVVF------------NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT-CNTI 440
Query: 158 GSCGN-TGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDL 216
SC N ++ ++++ G +LI +Y G+V+ A+ LF M ++ +
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 217 A----SWNSMVDGYLEAGDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALK 268
++N M+ Y + G + A L M D + T+ +I G A N A++
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIR 310
LF EMG GL N+ T +++ ++ + E ++ + R
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 39/269 (14%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D +NT+++ C S A + + + + PN+ T+ P++ N C
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL----NVMC-------- 239
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGDLS 233
K+G Q +L +++ R + + + D ++ ++DG + G L
Sbjct: 240 ----KSG-------QTALA--------MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 234 SAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
+A LF+ M K N++T+NI+I GF A KL R+M + N T ++
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR--- 346
+ + +L+E +H +I I T+LID +CK ++ A ++ + M ++
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 347 -NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
N+ ++N +I G+C +DGL LF +M
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKM 429
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 52/290 (17%)
Query: 110 NNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVS 168
N LD + +I CK H F + + N T+ LIG N G
Sbjct: 258 NIKLDAVKYSIIIDGLCK-HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA----SWNSMVD 224
G K +IK + + + LI + G ++ A L M+ R +A ++ S++D
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 225 GYLEAGDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
G+ + L A+ + D+M D N+ T+NI+I+G+ KA L+LFR+M G+
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF 340
+ T LI +C+ ++ +A +F
Sbjct: 437 DTVTY-----------------------------------NTLIQGFCELGKLNVAKELF 461
Query: 341 ERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
+ M +R N+V++ ++ G C +G E L +F++ ++K K E++I
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK---IEKSKMELDI 508
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT NT+I +C+ ++A+ + + + PN T+ L+ + G +
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEA 229
++ K+ + + + N +IH + V A LF S+ + + ++N M+ G +
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 230 GDLSSAHALFDVMPDKNLV----TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G LS A LF M + T+NI+I L + ++KL E+ G +A+T+
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTI 616
Query: 286 VCVV 289
V+
Sbjct: 617 KMVI 620
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 41/326 (12%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH- 173
F N +++ +S + LA FY + L + TF+ + G C V RK
Sbjct: 72 AFAGNNLMAKLVRSRNHELAFSFYRKMLE------TDTFINFVSLSGLLECYVQMRKTGF 125
Query: 174 -----AQVIKNGFDSVLPVQNSLIHMYA---DCGD-VQVARVLFDSMLARDLASWNSMVD 224
A ++K GF + N L+ +CG V + R + + L D+ S+N+++
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 225 GYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
G+ E +L A L + M +LVTW I+I F KA A+ +EM +GL+
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF 340
+ ++ L G+++ ++ I LI +CK +++ A+ +F
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 341 ERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVE---IDESPCAD 393
E M R N+ ++ +I G C G ++ L L + M+ D+ V I C D
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 394 RGVV-------------RLQPDEVTF 406
G+V R +PD +T+
Sbjct: 366 -GLVADAVEIVELMKKRRTRPDNITY 390
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 20/279 (7%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVP---LIGSCGNTGCIVSGR 170
D F NTVI +C+ + A + + S++ V LI + G +
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALEL---ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 171 KCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA----SWNSMVDGY 226
++ G ++ L V SLI + DCG++ + LFD +L R + ++N+++ G+
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 227 LEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
+ G L A +F+ M ++ N+ T+ +I G AL+L M + NA
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T ++ + + + + + + +R I L+ C ++ A+++
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 343 M------TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
M T+ +++S+NA+I G C L ++D +V
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 150/377 (39%), Gaps = 79/377 (20%)
Query: 119 NTVISAYCK-SHDPHLAQVFYF---RSLRFRFFPNSYTFVPLI-GSCGN----------- 162
NT+I +CK +++F F R +R PN YT+ LI G CG
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVR----PNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 163 ------------TGCIVSGRKCHAQVIKNGFDSVLPVQ-----------NSLIHMYADCG 199
T I+ + C ++ + + V ++ N L+ G
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Query: 200 DVQVARVLFDSMLAR------DLASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVT 249
D+ A L ML D+ S+N+++ G + L A ++D++ +K + VT
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Query: 250 WNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII 309
NI+++ LKA + A++L++++ + N+ T ++ ++ L + + +
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521
Query: 310 RMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRN----LVSWNAMILGHCIHGSPE 365
+ S+ L+ CK ++ A R+FE M N +VS+N MI G G +
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK 581
Query: 366 DGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSY 425
SL +VGM + L PD T+ + S+
Sbjct: 582 SAESL---LVGMSRAG-----------------LSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 426 FKQMTDVFGLKPNFAHL 442
F +M D G +P+ AH+
Sbjct: 622 FDKMVDS-GFEPD-AHI 636
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGC--IVSGRK 171
D N ++++ K+ D + A + + + NS T+ +I TG + G
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 172 CHAQVIK---NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVD 224
C +V + + FD N L+ G + A LF+ M D+ S+N M+D
Sbjct: 518 CKMRVSELQPSVFD-----YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 225 GYLEAGDLSSAHALFDVM------PDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGL 278
G L+AGD+ SA +L M PD L T++ +I+ FLK A+ F +M G
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPD--LFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630
Query: 279 KGNATTMVCVVTAC---GRSARLKEGRSVHGSIIRMFSRSSLILDTAL----IDMYCKCR 331
+ +A V+ C G + +L E +++ ++LD L +D C
Sbjct: 631 EPDAHICDSVLKYCISQGETDKLTE-------LVKKLVDKDIVLDKELTCTVMDYMCNSS 683
Query: 332 -RVELATRVFERMTN 345
++LA R+ R+T+
Sbjct: 684 ANMDLAKRLL-RVTD 697
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 13/270 (4%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
+T++ A+CK A FY R PN YT+ LI + G + + ++++
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEAGDLSS 234
G + + +LI D ++ A LF M + +LAS+N+++ G+++A ++
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 235 AHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
A L + + + +L+ + I G A + EM G+K N+ ++
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 550
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN----- 345
A +S EG + + + +++ LID CK + V A F R++N
Sbjct: 551 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 346 RNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
N + AMI G C E +LF++MV
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMV 640
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 12/244 (4%)
Query: 143 RFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQ 202
RFR FP + + L+ G ++ +I G + N +I GDV+
Sbjct: 220 RFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVE 279
Query: 203 VARVLFDSM----LARDLASWNSMVDGYLEAGDLSSAHALFDVMPD----KNLVTWNIMI 254
AR LF+ M L D ++NSM+DG+ + G L F+ M D +++T+N +I
Sbjct: 280 AARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
Query: 255 SGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSR 314
+ F K L+ +REM GLK N + +V A + +++ + + R+
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 315 SSLILDTALIDMYCKCRRVELATRVFERM----TNRNLVSWNAMILGHCIHGSPEDGLSL 370
+ T+LID CK + A R+ M N+V++ A+I G C ++ L
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 371 FDEM 374
F +M
Sbjct: 460 FGKM 463
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 144/410 (35%), Gaps = 87/410 (21%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTG------CIV 167
F N +I CK D A+ F ++FR P++ T+ +I G G C
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGL-FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 168 SGRK---CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWN 220
K C VI N+LI+ + G + + + M L ++ S++
Sbjct: 321 EEMKDMCCEPDVI---------TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 221 SMVDGYLEAGDLSSAHALFDVMPDKNLV----TWNIMISGFLKARNPGYALKLFREMGSV 276
++VD + + G + A + M LV T+ +I K N A +L EM V
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 277 GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELA 336
G++ N T ++ + R+KE + G + +L ALI + K + ++ A
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 337 TRVFERMTNR----NLVSWNAMILGHCI-------------------------------- 360
+ + R +L+ + I G C
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 361 ---HGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXX 417
G+P +GL L DEM +D ++ VTF +
Sbjct: 552 YFKSGNPTEGLHLLDEMKELD--------------------IEVTVVTFCVLIDGLCKNK 591
Query: 418 XXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAK 467
YF ++++ FGL+ N A M + L V+ A M +
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 641
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 125/244 (51%), Gaps = 17/244 (6%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN +T+ LI S + R+ Q+++ G + N+LI+ Y G ++ A +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 208 FDSMLARDLA----SWNSMVDGYLEAGDLSSAHALFD------VMPDKNLVTWNIMISGF 257
+ M +R L+ ++N ++ GY ++ ++ A + + V+PD +VT+N +I G
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPD--VVTYNSLIDGQ 472
Query: 258 LKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSL 317
++ N A +L M GL + T ++ + +S R++E + S+ + ++
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 318 ILDTALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIHGSPEDGLSLFDE 373
++ TALID YCK +V+ A + E+M ++N +++NA+I G C G ++ L ++
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 374 MVGM 377
MV +
Sbjct: 593 MVKI 596
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 149/378 (39%), Gaps = 33/378 (8%)
Query: 117 CVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQV 176
C NT++++ + + Y L + PN YT+ ++ G + + +++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 177 IKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEAGDL 232
++ G D SLI Y D+ A +F+ M R+ ++ ++ G A +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 233 SSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCV 288
A LF M D + T+ ++I + AL L +EM G+K N T +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 289 VTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL 348
+ + + ++ R + G ++ ++I ALI+ YCK +E A V E M +R L
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 349 V----SWNAMILGHC---IHGSPEDGLSLFDEMVGMDKVKGEVEIDE------------- 388
++N +I G+C +H + + + V D V ID
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 389 -SPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMAN 447
S DRG+V PD+ T+ + F + + G+ PN + +
Sbjct: 485 LSLMNDRGLV---PDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALID 540
Query: 448 LLANAGLVDEAEKCLRNM 465
AG VDEA L M
Sbjct: 541 GYCKAGKVDEAHLMLEKM 558
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 23/263 (8%)
Query: 121 VISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNG 180
+I YCK+ A + + L PNS TF LI G + +++K G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 181 FDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSSAH 236
+ LIH GD A F ML+ D ++ + + Y G L A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 237 ALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTAC 292
+ M + +L T++ +I G+ +A + + M G + + T + ++
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK-- 715
Query: 293 GRSARLKEGRSVHGSIIRMFSRSSLI-LDTALIDMYCKCRRVELATRVFERMTNRNLVSW 351
+K G+ GS + + S+++ DT VEL ++ E N S+
Sbjct: 716 -HLLEMKYGKQ-KGSEPELCAMSNMMEFDTV----------VELLEKMVEHSVTPNAKSY 763
Query: 352 NAMILGHCIHGSPEDGLSLFDEM 374
+ILG C G+ +FD M
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHM 786
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 130/309 (42%), Gaps = 50/309 (16%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFYFRSLR-FRFFPNSYTFVPLIGSCGNTGC-IVSGRKCH 173
+ + +ISAY +S H + F S++ + PN T+ +I +CG G K
Sbjct: 269 YAFSALISAYGRS-GLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++ +NG NSL+ + + G + AR LFD M R D+ S+N+++D +
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLF--------------- 270
G + A + MP K N+V+++ +I GF KA AL LF
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 271 --------------------REMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIR 310
REM SVG+K + T ++ G+ + E + V + R
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 311 MFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIHGSPED 366
+L+ + LID Y K + A +F + L V ++A+I C +G
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 367 GLSLFDEMV 375
+SL DEM
Sbjct: 568 AVSLIDEMT 576
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 47/254 (18%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D F NT++ A CK LA + R PN ++ +I G
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEA 229
++ G N+L+ +Y G + A + M + +D+ ++N+++ GY +
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G +F M + NL+T++ +I G+ K A+++FRE S GL
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL------- 545
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
R+ ++L +ALID CK V A + + MT
Sbjct: 546 ----------------------------RADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577
Query: 346 R----NLVSWNAMI 355
N+V++N++I
Sbjct: 578 EGISPNVVTYNSII 591
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 118/298 (39%), Gaps = 47/298 (15%)
Query: 90 LSRASNLCGVDFTLLIFRYFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPN 149
L R + V F L LD NT+I YCK + H A V + LR P+
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 150 SYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFD 209
T+ SLIH G++ A D
Sbjct: 345 VITYT-----------------------------------SLIHSMCKAGNMNRAMEFLD 369
Query: 210 SMLARDLA----SWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKAR 261
M R L ++ ++VDG+ + G ++ A+ + M D ++VT+N +I+G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 262 NPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDT 321
A+ + +M GL + + V++ RS + E V ++ + I +
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 322 ALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIHGSPEDGLSLFDEMV 375
+LI +C+ RR + A ++E M L ++ A+I +C+ G E L L +EMV
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 131/354 (37%), Gaps = 108/354 (30%)
Query: 202 QVARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGF 257
V + + +S ++ ++ ++N ++ G+ AG++ A LFD M K N+VT+N +I G+
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 258 LKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKE-----------GRSV-- 304
K R KL R M GL+ N + V+ R R+KE G S+
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 305 ----------------------HGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
H ++R S+I T+LI CK + A ++
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 343 MTNRNL---------------------------------------VSWNAMILGHCIHGS 363
M R L V++NA+I GHC+ G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 364 PEDGLSLFDEMVGMDKVKG-----------------EVEIDESPCADRGVVR--LQPDEV 404
ED +++ ++M K KG ++DE+ R +V ++PD +
Sbjct: 431 MEDAIAVLEDM----KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 405 TFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPN------FAHLWCMANLLANA 452
T+ + +++M V GL P+ + +CM L A
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKA 539
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 112 PLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRK 171
P D F +I+AYC D A + + P+ T+ LI R+
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS---RTRE 573
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLASWNSMVDGYLEAGD 231
++K ++ +P + + +C +++ V+ S++ G+ G
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV-------------SLIKGFCMKGM 620
Query: 232 LSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVC 287
++ A +F+ M KN +NIMI G +A + A L++EM G + T++
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680
Query: 288 VVTACGRSARLKEGRSVHGSIIR 310
+V A + ++ E SV ++R
Sbjct: 681 LVKALHKEGKVNELNSVIVHVLR 703
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 17/271 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLI-GSCGNTGCIVSGRKC 172
D NT+I CK + A + R R ++ T+ L+ G C + + R
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLE 228
V+++ +V+ ++I ++ G A L++ M R D+ ++NS+++G
Sbjct: 233 RDMVMRDIVPNVITF-TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 229 AGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
G + A + D+M K ++VT+N +I+GF K++ KLFREM GL G+ T
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
++ ++ R + + RM SR ++ + L+ C RVE A +FE M
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 345 NR----NLVSWNAMILGHCIHGSPEDGLSLF 371
++ ++N +I G C G+ ED LF
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 16/275 (5%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + N VI+ C+ +A + ++F + P+ T LI +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEA 229
+++ + GF + + N++I G V A LFD M + D ++NS+V G +
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 230 GDLSSAHALF------DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
G S A L D++P N++T+ +I F+K A+KL+ EM + +
Sbjct: 223 GRWSDAARLMRDMVMRDIVP--NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
T ++ R+ E + + ++ ++ LI+ +CK +RV+ T++F M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 344 TNRNLV----SWNAMILGHCIHGSPEDGLSLFDEM 374
R LV ++N +I G+ G P+ +F M
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D NT+I+ +CKS + + ++ T+ +I G +GR
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII-----QGYFQAGRPDA 367
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGD--VQVARVLFDSM----LARDLASWNSMVDGYL 227
AQ I + DS ++ I +Y C + V+ A VLF++M + D+ ++N ++ G
Sbjct: 368 AQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 228 EAGDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGL 278
+ G++ A LF + K L V++ MISGF + R + L+R+M GL
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 54/291 (18%)
Query: 110 NNPLDTFCVNTVISAYCKSHDPHLAQVF-YFRSLRFR-FFPNSYTFVPLIGSCGNTGCIV 167
N LD + +I CK D L F F + + F + T+ LIG N G
Sbjct: 258 NIKLDAVKYSIIIDGLCK--DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 168 SGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLA----SWNSMV 223
G K +IK + + LI + G ++ A L M+ R +A ++NS++
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 224 DGYLEAGDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLK 279
DG+ + L A + D+M D +++T+NI+I+G+ KA L+LFREM G+
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 280 GNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
N T L+ +C+ ++E+A ++
Sbjct: 436 ANTVTY-----------------------------------NTLVQGFCQSGKLEVAKKL 460
Query: 340 FERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
F+ M +R ++VS+ ++ G C +G E L +F + ++K K E++I
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK---IEKSKMELDI 508
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 12/273 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT NT+++ C A R + P T L+ G +
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++++ GF ++++ G +A L M R D ++ ++DG +
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G L +A LF+ M K +++T+N +I GF A KL R+M + N T
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ + + +L+E + +++ + I +LID +CK R+E A ++ + M +
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 346 R----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ +++++N +I G+C +DGL LF EM
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 118 VNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSG----RKCH 173
+NT+++ C + A V R + F PN T+ P++ +G RK
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
+ IK D+V + +I G + A LF+ M + D+ ++N+++ G+ A
Sbjct: 256 ERNIK--LDAV--KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 230 GDLSS-AHALFDVMPDK---NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G A L D++ K N+VT++++I F+K A +L +EM G+ N T
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ + RL+E + +I ++ LI+ YCK R++ +F M+
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 346 R----NLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
R N V++N ++ G C G E LF EMV
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 133/346 (38%), Gaps = 42/346 (12%)
Query: 243 PDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGR 302
P ++ +N + S K + L L ++M S G+ + T+ ++ R +L
Sbjct: 84 PLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAF 143
Query: 303 SVHGSIIRM-FSRSSLILDTALIDMYCKCR---RVELATRVFERMTNRNLVSWNAMILGH 358
S G I+++ + ++I +T L + +CR +EL R+ E L++ N ++ G
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL 203
Query: 359 CIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXX 418
C++G D + L D MV QP+EVT+ +
Sbjct: 204 CLNGKVSDAVVLIDRMVE--------------------TGFQPNEVTYGPVLNVMCKSGQ 243
Query: 419 XXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNM--AKFDGDMSRES 476
++M + +K + + + L G +D A M F D+ +
Sbjct: 244 TALAMELLRKMEE-RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 477 MLWANLLALCRFRRDVYLGEQFAKLLVDMYPK----NLACYQFLLIIYAVAAQWENVSTV 532
L R+ + AKLL DM + N+ + L+ + + +
Sbjct: 303 TLIGGFCNAGRW-------DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 533 QKLMKERRLGIIPGSSLVDLKYIVHNFKVSEKRHEGIEAVNMMMDE 578
K M +R GI P + + ++ F + E I+ V++M+ +
Sbjct: 356 LKEMMQR--GIAPNT--ITYNSLIDGFCKENRLEEAIQMVDLMISK 397
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 12/261 (4%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
+TVI + CK A + PN T+ LI N G + + +I+
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSS 234
+ L ++LI + G + A L++ M+ R ++ +++S+++G+ L
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 235 AHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
A + ++M K N+VT+N +I+GF KA+ ++LFREM GL GN T ++
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR---- 346
++ + V ++ + +++ L+D CK ++ A VFE +
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 347 NLVSWNAMILGHCIHGSPEDG 367
++ ++N MI G C G + G
Sbjct: 497 DIYTYNIMIEGMCKAGKWKMG 517
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 141/372 (37%), Gaps = 68/372 (18%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
+ + N +I+ +C+ LA + ++ + P+ T L+ + I
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
Q+++ G+ +LIH A L D M+ R DL ++ ++V+G +
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 230 GDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
GD A L + M + N+V ++ +I K R+ AL LF EM + G++ N T
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
+++ R + + +I +L+ +ALID + K ++ A +++E M
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 346 R---------------------------------------NLVSWNAMILGHCIHGSPED 366
R N+V++N +I G C +
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 367 GLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYF 426
G+ LF EM + RG+V + VT+ + + F
Sbjct: 412 GMELFREM-----------------SQRGLV---GNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 427 KQMTDVFGLKPN 438
KQM V G+ PN
Sbjct: 452 KQMVSV-GVHPN 462
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 47/302 (15%)
Query: 120 TVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKN 179
T+I CK + A+ +F + N T+ LI G G + + ++ ++
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED 262
Query: 180 GFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR------------------------- 214
G L N +++ G + A +FD M R
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 215 --------------DLASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISG 256
+L ++N+++DG+ G L A +L + + +LVT+NI++SG
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 257 FLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSS 316
F + + A K+ +EM G+K + T ++ RS +++ + S+ +
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Query: 317 LILDTALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIHGSPEDGLSLFD 372
+ + LI +C ++ A+R+F+ M +N V +N MILG+C GS L L
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 373 EM 374
EM
Sbjct: 503 EM 504
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/432 (19%), Positives = 172/432 (39%), Gaps = 46/432 (10%)
Query: 138 YFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYAD 197
+F + + + Y+F LI C G I ++ + GF + + +LI
Sbjct: 151 FFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 198 CGDVQVARVLFDSM----LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVT 249
G+++ A+ LF M L + ++ +++G + G +++ M + NL T
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 250 WNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSII 309
+N +++ K A ++F EM G+ N T ++ R +L E V +
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 310 RMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPE 365
+LI LID +C ++ A + + +R +LV++N ++ G C G
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 366 DGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSY 425
+ EM +RG+ +P +VT+ +
Sbjct: 391 GAAKMVKEM-----------------EERGI---KPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 426 FKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLAL 485
M ++ GL P+ + + G ++EA + ++M + + + E + +L
Sbjct: 431 RLSMEEL-GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE-PNEVIYNTMILGY 488
Query: 486 CRFRRDVYLGEQFAKLLVDMYPK----NLACYQFLL-IIYAVAAQWENVSTVQKLMKERR 540
C+ + KLL +M K N+A Y++++ ++ E V+K++
Sbjct: 489 CKEGSSY----RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS-- 542
Query: 541 LGIIPGSSLVDL 552
GI P +S++ L
Sbjct: 543 -GIDPSTSILSL 553
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 15/283 (5%)
Query: 108 YFNNPLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIV 167
Y+ L ++ A K + + Y +R + PN +TF +I + TG +
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240
Query: 168 SGRKCHAQVIKNGFDSVLPVQNSLIHMYADC---GDVQVARVLFDSMLARD----LASWN 220
R + G + N+LI Y G + A + M+ D L ++N
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300
Query: 221 SMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSV 276
++DG+ + +L + +F M D+ N++++N +I+G A+ + +M S
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 277 GLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELA 336
G++ N T ++ ++ LKE + GS+ + + + LID YCK +++
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 337 TRVFERMTNRNLV----SWNAMILGHCIHGSPEDGLSLFDEMV 375
+ E M +V ++N +I G C +G+ E LFD++
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 129/283 (45%), Gaps = 24/283 (8%)
Query: 114 DTFCVNTVIS-----AYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVS 168
D CVN++I+ AY + L + RS + + ++ + PL+ +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 169 GRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVD 224
+ ++I+ + N +I+ G + AR + + M + ++ S+N+++D
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 225 GYLE---AGDLSSAHALF------DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGS 275
GY + G + A A+ DV P NL T+NI+I GF K N ++K+F+EM
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSP--NLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324
Query: 276 VGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVEL 335
+K N + ++ ++ E S+ ++ + +LI ALI+ +CK ++
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 336 ATRVFERMTNRNLVS----WNAMILGHCIHGSPEDGLSLFDEM 374
A +F + + V +N +I +C G +DG +L +EM
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 19/270 (7%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN ++ LI N G I +++ G L N+LI+ + ++ A +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 208 FDSMLARDLAS----WNSMVDGYLEAGDLSSAHALFDVMPDKNLV----TWNIMISGFLK 259
F S+ + +N ++D Y + G + AL + M + +V T+N +I+G +
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
N A KLF ++ S GL T + + C R ++ + + +M + +
Sbjct: 449 NGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYC-RKGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 320 DTALIDMYCKCRRVELATRV-----FERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
++ YCK ++ AT + ER N+ S+N ++ G+ G ED L +EM
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Query: 375 VGMDKVKGEV--EIDESPCADRGVVRLQPD 402
+ V + EI + D+G V PD
Sbjct: 568 LEKGLVPNRITYEIVKEEMVDQGFV---PD 594
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 156/392 (39%), Gaps = 28/392 (7%)
Query: 112 PLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRK 171
PL C N V+ C S P A F + ++ F P+ TF L+ + I
Sbjct: 116 PLLCTC-NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIA 174
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYL 227
Q++ GF + +LI + A LF+ M ++ ++N++V G
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 228 EAGDLSSAHALF-DVMP---DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
E G A L D+M + N++T+ +I F+K A +L+ M + + +
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
T ++ L E R + + R + ++ T LI +CK +RVE ++F M
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 344 TNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGM----DKVKGEVEIDESPCADR- 394
+ + N +++ +I G+C+ G P+ +F++M D V +D C +
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 395 -------GVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVF--GLKPNFAHLWCM 445
+R + ++ + F +F G+KPN M
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 446 ANLLANAGLVDEAEKCLRNMAKFDGDMSRESM 477
+ GL+ EA+ + M K DG + ES+
Sbjct: 475 ISGFCRRGLIHEADSLFKKM-KEDGFLPNESV 505
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 128/273 (46%), Gaps = 12/273 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D++ NT+I+ YCK LA+ ++ F P+ +T+ LI + G
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDV----QVARVLFDSMLARDLASWNSMVDGYLEA 229
+ + G + + N+LI ++ G + Q+A + + L ++ ++N +V+G +
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G +S A L VM K ++ T+NI+I G+ AL++ M G+ + T
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ ++++ ++ + +++ +L L++ C+ R+++ A + E M N
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 346 RNL----VSWNAMILGHCIHGSPEDGLSLFDEM 374
+++ V++ +I G C +G + +LF +M
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 108/275 (39%), Gaps = 13/275 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D F ++I C + + A + +L PN + LI N G I+ +
Sbjct: 355 DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 414
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++ + G + N L++ G V A L M+++ D+ ++N ++ GY
Sbjct: 415 NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
+ +A + DVM D ++ T+N +++G K ++ ++ M G N T
Sbjct: 475 LKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTF 534
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ + R +L E + + + LID +CK ++ A +F +M
Sbjct: 535 NILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Query: 346 RNLVSWNAMILGHCIHGSPED-----GLSLFDEMV 375
VS + IH E LF EMV
Sbjct: 595 AYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 118/290 (40%), Gaps = 38/290 (13%)
Query: 195 YADCGDVQVARVLFDSMLARD----LASWNSMVDGYLEAGDLSSAHALFDVMPDKNLV-- 248
Y G VQ A +F+ M D + S+N+++ +++G AH ++ M D+ +
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 249 --TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHG 306
++ I + F K P AL+L M S G + N VV EG + G
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 307 SIIRMFSRSSLILDT--ALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCI 360
++ S SL L T L+ + CK V+ ++ +++ R NL ++N I G C
Sbjct: 206 KMLA--SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263
Query: 361 HGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXX 420
G + + MVG I++ P +PD +T+ +
Sbjct: 264 RGELDGAV----RMVG-------CLIEQGP---------KPDVITYNNLIYGLCKNSKFQ 303
Query: 421 XGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDG 470
Y +M + GL+P+ + G+V AE+ + + A F+G
Sbjct: 304 EAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGGMVQLAERIVGD-AVFNG 351
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 124/276 (44%), Gaps = 17/276 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVF-YFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRK 171
D NT+I CK H+ F F + + P+ +T+ PLI N G +
Sbjct: 249 DVVIYNTIIDGLCKYK--HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR-----DLASWNSMVDGY 226
+ +++ + L N+LI + G + A L+D M+ D+ ++N+++ G+
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 227 LEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
+ + +F M + N VT+ +I GF +AR+ A +F++M S G+ +
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T ++ + ++ V + + + ++ T +I+ CK +VE +F
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 343 MTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
++ + N+V++ M+ G C G E+ +LF EM
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 12/214 (5%)
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
+++K G+ + NSL++ + + A L D M+ D ++ ++V G +
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
S A AL + M K +LVT+ +I+G K P AL L +M ++ +
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ + + + + + + + LI C R A+R+ M
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 346 RN----LVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+N LV +NA+I G + L+DEMV
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 14/229 (6%)
Query: 156 LIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIH-----MYADCGDVQVARVLFDS 210
LI S G G + ++ +NG + L N L++ M+ D + +V V+
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAE-RVFEVMESG 251
Query: 211 MLARDLASWNSMVDGYLEAGDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYA 266
+ D+ ++N+M+ GY +AG A M + + +T+ MI + G
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 267 LKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM 326
+ L++EM G++ V+ + +L EG +V ++IR S+ ++ + T LID
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 327 YCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGLSLF 371
Y K VE A R+ RM + ++V+++ ++ G C +G E+ L F
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 34/350 (9%)
Query: 131 PHLAQVFYFRSLRFRFFP-NSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQN 189
P +A F+ S + + + N +V L+ + R +++ K F + N
Sbjct: 132 PDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAAN 191
Query: 190 SLIHMYADCGDVQ----VARVLFDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPD- 244
+LI + G V+ V R + ++ + L ++N +++G + A + SA +F+VM
Sbjct: 192 ALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESG 251
Query: 245 ---KNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEG 301
++VT+N MI G+ KA A++ R+M + G + + T + ++ AC +
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 302 RSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILG 357
+++ + + + +I CK ++ VFE M + N+ + +I G
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 358 HCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXX 417
+ GS ED + L M IDE +PD VT+ +
Sbjct: 372 YAKSGSVEDAIRLLHRM-----------IDEG---------FKPDVVTYSVVVNGLCKNG 411
Query: 418 XXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAK 467
YF GL N + + L AG VDEAE+ M++
Sbjct: 412 RVEEALDYF-HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSE 460
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 121/277 (43%), Gaps = 17/277 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGRKC 172
D NT+I YCK+ A + R + R + T++ +I +C S
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKA-MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 173 HAQVIKNGFDSVLPVQNSL-IHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYL 227
+ ++ + G V P SL I G + +F++M+ + ++A + ++DGY
Sbjct: 315 YQEMDEKGI-QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 228 EAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
++G + A L M D+ ++VT++++++G K AL F GL N+
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 284 TMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
++ G++ R+ E + + ALID + K R+V+ A +F+RM
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 344 T-----NRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
++ + ++ ++ G E+ L L+D M+
Sbjct: 494 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMI 530
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 16/240 (6%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
+I Y KS A R + F P+ T+ ++ G +
Sbjct: 366 TVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRF 425
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEAGDLSS 234
+G +SLI G V A LF+ M RD +N+++D + + +
Sbjct: 426 DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDE 485
Query: 235 AHALFDVMP-----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
A ALF M D+ + T+ I++SG K ALKL+ M G+ A +
Sbjct: 486 AIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALS 545
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDM---YCKCRRVELATRVFERMTNR 346
T S ++ + + M +ILD A DM CK R++ A ++ + +T R
Sbjct: 546 TGLCLSGKVARACKILDELAPM----GVILDAACEDMINTLCKAGRIKEACKLADGITER 601
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 112/265 (42%), Gaps = 12/265 (4%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
NT+I + CK +A + PN T+ LI N G + + +++
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSS 234
+ + N+LI + G + A L + M+ R D ++N +++G+ L
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 235 AHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
A +F M K N+ T+N +I+GF K + ++LFREM GL GN T ++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR---- 346
++ + V ++ + ++ + L+ C +++ A +F+ +
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 347 NLVSWNAMILGHCIHGSPEDGLSLF 371
N+ +N MI G C G + LF
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLF 526
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 22/278 (7%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D ++++++ YC S A + + + P+++TF LI G + +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH-----GLFLHNKASE 206
Query: 174 A-----QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDLAS----WNSMVD 224
A Q+++ G L ++++ GD+ +A L + M A + + +N+++D
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 225 GYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKG 280
+ + A LF M K N+VT+N +I+ A +L M +
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 281 NATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVF 340
N T ++ A + +L E +H +I+ I LI+ +C R++ A ++F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 341 ERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
+ M ++ N+ ++N +I G C EDG+ LF EM
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 189 NSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSSAHALFDVMPD 244
N++I V+VA LF M + ++ ++NS+++ G S A L M +
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 245 K----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKE 300
K N+VT+N +I F K A KL EM + + T ++ RL E
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 301 GRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMIL 356
+ + ++ ++ LI+ +CKC+RVE +F M+ R N V++ +I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 357 GHCIHGSPEDGLSLFDEMV 375
G G + +F +MV
Sbjct: 442 GFFQAGDCDSAQMVFKQMV 460
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVI 177
NT+I+ +CK V FR + R N+ T+ +I G S + Q++
Sbjct: 402 NTLINGFCKCKRVE-DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 178 KNGFDSVLPVQNSLIHMYADCGDVQVARVLFD----SMLARDLASWNSMVDGYLEAGDLS 233
N + + + L+H G + A V+F S + ++ +N+M++G +AG +
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 234 SAHALF---DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
A LF + PD +VT+N MISG R A LFR+M G N+ T ++
Sbjct: 521 EAWDLFCSLSIKPD--VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 291 A----CGRSAR---LKEGRS 303
A C R+A +KE RS
Sbjct: 579 ANLRDCDRAASAELIKEMRS 598
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 47/252 (18%)
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR------------------- 214
A+++K G++ + +SL++ Y + A L D M+
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 215 --------------------DLASWNSMVDGYLEAGDLSSAHALFDVMP----DKNLVTW 250
DL ++ ++V+G + GD+ A L + M N+V +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 251 NIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIR 310
N +I K R+ A+ LF EM + G++ N T ++ R + + +++
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 311 MFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIHGSPED 366
+++ ALID + K ++ A ++ E M R++ +++N +I G C+H ++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 367 GLSLFDEMVGMD 378
+F MV D
Sbjct: 382 AKQMFKFMVSKD 393
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 100/243 (41%), Gaps = 28/243 (11%)
Query: 268 KLFREMGSVGLKGNATTMVCVV---TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALI 324
+L+++ + KG C V +C L+ + VH ++ R L+ +I
Sbjct: 219 RLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVI 278
Query: 325 DMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
M+ +C + A RVF+ M ++++ SW+ M+ + +G +D L LF+EM
Sbjct: 279 SMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG------ 332
Query: 385 EIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWC 444
L+P+E TF+ + +F M + G+ P H
Sbjct: 333 --------------LKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLG 378
Query: 445 MANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCRFRRDVYLGEQFAKLLVD 504
+ +L G + EAE+ +R++ + W + R D+ L + +L+VD
Sbjct: 379 VLGVLGKCGHLVEAEQYIRDLP-----FEPTADFWEAMRNYARLHGDIDLEDYMEELMVD 433
Query: 505 MYP 507
+ P
Sbjct: 434 VDP 436
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 31/154 (20%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
P+ FV L SC N + +K H +++ F + N +I M+ +C + A+ +
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 208 FDSMLARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYAL 267
FD M+ +D+ SW+ M+ Y + G M D AL
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNG-----------MGDD--------------------AL 322
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEG 301
LF EM GLK N T + V AC ++E
Sbjct: 323 HLFEEMTKHGLKPNEETFLTVFLACATVGGIEEA 356
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 122/307 (39%), Gaps = 51/307 (16%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N++++ C+S D LA + + +T+ +I S GCI +
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 174 AQVIKNGFDSVLPVQNSLIH-----------------------------------MYADC 198
++ G S + NSL+ ++
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 199 GDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSSAHALFDVM------PDKNLV 248
G +Q A L+ M+ R ++ ++N+++DGY LS A+ + D+M PD +V
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD--IV 369
Query: 249 TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSI 308
T+ +I G+ + +K+FR + GL NA T +V +S ++K + +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 309 IRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMILGHCIHGSP 364
+ ++ L+D C ++E A +FE + + V + +I G C G
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 365 EDGLSLF 371
ED +LF
Sbjct: 490 EDAWNLF 496
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 131/305 (42%), Gaps = 33/305 (10%)
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
+V+K G++ N+LI G V A VL D M+ D+ ++NS+V+G +
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 230 GDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
GD S A L M ++N+ T++ +I + A+ LF+EM + G+K + T
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
+V ++ + +G + ++ ++I L+D++ K +++ A +++ M
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 346 R----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQP 401
R N++++N ++ G+C+ + ++ D MV + C+ P
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV------------RNKCS--------P 366
Query: 402 DEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKC 461
D VTF + G F+ ++ GL N + +G + AE+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 462 LRNMA 466
+ M
Sbjct: 426 FQEMV 430
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 150/385 (38%), Gaps = 56/385 (14%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQ 175
F N +I + CK H A++ + R + PN T+ LI G + + +
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDL----ASWNSMVDGYLEAGD 231
++ G + NSLI+ + GD+ A M+ + L ++ S++ GY G
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 232 LSSAHALFDVMPDKNLV----TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVC 287
++ A L+ M K + T+ ++SG +A A+KLF EM +K N T
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 288 VVTACGRSARLKEGRSVHGSIIRMF------SRSSLILDT----ALIDMYCKCRRVELAT 337
++ EG G + + F + ++ DT LI C + A
Sbjct: 548 MI----------EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA- 596
Query: 338 RVFERMTNR-----NLVSWNAMILGHCIHGSPEDGLSLFDEM----VGMDKVKGEVEIDE 388
+VF ++ N + + ++ G C G E+ LS+ EM V +D V V ID
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 389 S--------------PCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFG 434
S DRG L+PD+V + + + M + G
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRG---LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-G 712
Query: 435 LKPNFAHLWCMANLLANAGLVDEAE 459
PN + N L AG V+EAE
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAE 737
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 190 SLIHMYADCGDVQVARVLFDSML----ARDLASWNSMVDGYLEAGDLSSAHAL------F 239
+L++ + ++ + D ML + A+ +S+V+G + G + A L F
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361
Query: 240 DVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLK 299
V P NL +N +I K R A LF MG +GL+ N T ++ R +L
Sbjct: 362 GVSP--NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419
Query: 300 EGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL----VSWNAMI 355
S G ++ + S+ +LI+ +CK + A M N+ L V++ +++
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 356 LGHCIHGSPEDGLSLFDEMVG 376
G+C G L L+ EM G
Sbjct: 480 GGYCSKGKINKALRLYHEMTG 500
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 12/284 (4%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
L + N++I+ +CK D A+ F + + P T+ L+G + G I +
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDL----ASWNSMVDGYLE 228
+ ++ G + +L+ G ++ A LF+ M ++ ++N M++GY E
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 229 AGDLSSAHALFDVMPDKNLV----TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
GD+S A M +K +V ++ +I G A + + N
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
++ R +L+E SV +++ L+ LID K + +L + + M
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 345 NRNL----VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEV 384
+R L V + +MI G ++ ++D M+ V EV
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 118/321 (36%), Gaps = 54/321 (16%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHA 174
T+C T++ CK + + L RF P+ L+ G I
Sbjct: 299 TYC--TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVK 356
Query: 175 QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----------------------- 211
+V+ G L V N+LI A +LFD M
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 212 ----------------LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDKNL----VTWN 251
L + +NS+++G+ + GD+S+A M +K L VT+
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 252 IMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRM 311
++ G+ AL+L+ EM G+ + T +++ R+ +++ + +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 312 FSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLV----SWNAMILGHCIHGSPEDG 367
+ + + +I+ YC+ + A + MT + +V S+ +I G C+ G +
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 368 LSLFDEMVGMDKVKGEVEIDE 388
D + KG E++E
Sbjct: 597 KVFVDGL-----HKGNCELNE 612
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 115/281 (40%), Gaps = 30/281 (10%)
Query: 215 DLASWNSMVDGYL------EAGDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALK 268
++ +N ++DG EA + A D+ PD +VT+ ++ G K + L+
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPD--VVTYCTLVYGLCKVQEFEIGLE 318
Query: 269 LFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYC 328
+ EM + + + +V + +++E ++ ++ +L + ALID C
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 329 KCRRVELATRVFERMTNRNL----VSWNAMILGHCIHGSPEDGLSLFDEMV--------- 375
K R+ A +F+RM L V+++ +I C G + LS EMV
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 376 -------GMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQ 428
G K G++ E A+ +L+P VT+ + + +
Sbjct: 439 PYNSLINGHCKF-GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 429 MTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFD 469
MT G+ P+ + + L AGL+ +A K MA+++
Sbjct: 498 MTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 24/276 (8%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
N +I YC+ D A F P++Y++ PLI G ++G+ A+V
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI-----HGLCLTGQASEAKVFV 600
Query: 179 NGFDSVLPVQNS-----LIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
+G N L+H + G ++ A + M+ R DL + ++DG L+
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 230 GDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
D L M D+ L V + MI K + A ++ M + G N T
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKC-----RRVELATRVF 340
V+ ++ + E + + + S + + +D+ K + VEL +
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 341 ERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMVG 376
+ + N ++N +I G C G E+ L M+G
Sbjct: 781 KGLL-ANTATYNMLIRGFCRQGRIEEASELITRMIG 815
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 159/399 (39%), Gaps = 68/399 (17%)
Query: 116 FCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQ 175
+ N +I+ +C+ LA + ++ + P+ T L+ + I Q
Sbjct: 46 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 105
Query: 176 VIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGD 231
+++ G+ +LIH A L D M+ R +L ++ +V+G + GD
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 232 LSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT--- 284
+ A L + M + ++V +N +I K R+ AL LF+EM + G++ N T
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 285 MVCVVTACGR---------------------------SARLKEGRSV-----HGSIIRMF 312
++ + + GR A +KEG+ V H +I+
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 313 SRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGL 368
+ +LI+ +C R++ A ++FE M ++ +L ++N +I G C EDG
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 369 SLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQ 428
LF EM + RG+V D VT+ + + FKQ
Sbjct: 346 ELFREM-----------------SHRGLV---GDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 429 MTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAK 467
M G+ P+ + + L N G +++A + M K
Sbjct: 386 MVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 112/239 (46%), Gaps = 12/239 (5%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN TF LI + G V K H +IK D + NSLI+ + + A+ +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 208 FDSMLAR----DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNL----VTWNIMISGFLK 259
F+ M+++ DL ++N+++ G+ ++ + LF M + L VT+ +I G
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
+ A K+F++M S G+ + T ++ + +L++ V + + + + +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 320 DTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
T +I+ CK +V+ +F ++ + N+V++N MI G C ++ +L +M
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 24/227 (10%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFR-FFPNSYTFVPLIGSCGNTGCIVSGRK 171
LDT+ NT+I +CKS FR + R ++ T+ LI + G + +K
Sbjct: 325 LDTY--NTLIKGFCKSKRVEDGTEL-FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 172 CHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYL 227
Q++ +G + + L+ + G ++ A +FD M + D+ + +M++G
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 228 EAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKAR--NPGYA-LKLFREMGSVGLKG 280
+AG + LF + K N+VT+N MISG R YA LK +E G + G
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 281 NATTMVCVVTACGRSARLKEG-RSVHGSIIRMFSRSSLILDTALIDM 326
T++ A L++G ++ +IR + D + I +
Sbjct: 502 TYNTLI--------RAHLRDGDKAASAELIREMRSCRFVGDASTIGL 540
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 21/267 (7%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLR-FRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
D C N +I + K D A + R L +PN T +I G + K
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLE 228
++ +N + L +SLIH D G+V A +F+ + R D+ ++N+M+ G+
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 229 AGDLSSAHALFDVMPDK---NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G + + L+ +M K N+V++NI+I G L+ A ++R M + G + TT
Sbjct: 338 CGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTY 397
Query: 286 ------VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRV 339
+CV ++ + + G + +++ +S +ID CK +R+E A+ +
Sbjct: 398 GIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS------IIDCLCKKKRLEEASNL 451
Query: 340 FERMTNRNLVSWNAMILGHCIHGSPED 366
+ M+ ++ V N+ + I G D
Sbjct: 452 VKEMS-KHGVELNSHVCNALIGGLIRD 477
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 12/239 (5%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN T+ LI R + K GF + +++I+ A G + A L
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 208 FDSM----LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDK-----NLVTWNIMISGFL 258
FD M +A D+ +N ++DG+L+ D +A L+D + + N+ T NIMISG
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS 266
Query: 259 KARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLI 318
K LK++ M + + T ++ + + + SV + + ++
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326
Query: 319 LDTALIDMYCKCRRVELAT---RVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFDEM 374
++ +C+C +++ + R+ E + N+VS+N +I G +G ++ ++ M
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLM 385
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 8/266 (3%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + +I CK AQ + L PN +T+ +I + G ++
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
+I+ + + N+LI G + A L D ML R D ++NSM+ G+ +
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
A +FD+M ++VT+N +I + +A+ ++L RE+ GL N TT ++
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFE--RMTNRN 347
L + + +I I L+ +C+ ++E A +FE +M+ +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 348 L--VSWNAMILGHCIHGSPEDGLSLF 371
L V++N +I G C ++ LF
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLF 560
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 125/304 (41%), Gaps = 29/304 (9%)
Query: 112 PLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTF----------------VP 155
PL+ + N +I +C H + + + + F P+ TF +
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197
Query: 156 LIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR- 214
L G TG + Q+++ G V+ N+LI+ G V A L + M+ +
Sbjct: 198 LFGYMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 215 ---DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYAL 267
D+ ++ ++V+G + GD SA L M + ++ V ++ +I K + A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
LF EM G+ N T C++ R + + + +I ++ ALI
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 328 CKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGE 383
K ++ A ++ + M +R + V++N+MI G C H +D +FD M D V
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN 436
Query: 384 VEID 387
ID
Sbjct: 437 TIID 440
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTF-VPLIGSCGNTGCIVSGRKC 172
+T NT+I +C+ + + AQ + + P++ T + L G C N +
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 173 HA-QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYL 227
Q+ K D+V N +IH V A LF S+ + D+ ++N M+ G+
Sbjct: 526 EVIQMSKIDLDTV--AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 228 EAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
+S A+ LF M D + T+N +I G LKA +++L EM S G G+A
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 284 TM 285
T+
Sbjct: 644 TI 645
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 123/274 (44%), Gaps = 12/274 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + +I +C+ A + ++ + P+ TF L+ I
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEA 229
++K+G++ + V N+LI G++ +A L + M L D+ ++N+++ G +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 230 GDLS-SAHALFDVMP---DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G S +A L D+M + ++VT+ +I F+K N A +L++EM + N T
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT- 344
++ RL + + + +++ LI +CK R V+ ++F+RM+
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 345 ---NRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
N ++ ++N +I G+C G L +F MV
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 113/270 (41%), Gaps = 22/270 (8%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHA---- 174
NT+I CK+ + ++A + + T+ L+ TG SGR A
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL-----TGLCYSGRWSDAARML 234
Query: 175 -QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLARDL----ASWNSMVDGYLEA 229
++K + + +LI ++ G++ A+ L+ M+ + ++NS+++G
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G L A FD+M K N+VT+N +ISGF K R +KLF+ M G + T
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ + +L+ + ++ +I L+ C +E A F+ M
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 346 RN----LVSWNAMILGHCIHGSPEDGLSLF 371
+V++N MI G C E LF
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 147 FPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARV 206
FPN T+ LI + G K ++ GF++ + N+LIH Y G ++VA
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 207 LFDSMLAR----DLASWNSMVDGYLEAGDLSSAHALFDVMPDKN----LVTWNIMISGFL 258
+F M++R D+ + ++ G G++ SA FD M + +V +NIMI G
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Query: 259 KARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEG 301
KA A +LF + G+K +A T ++ ++ +E
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 33/323 (10%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + T I+A+CK A + + PN TF +I G G
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++++ G + L + L+ + A + M + ++ +N+++D ++EA
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 230 GDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGL---KGNA 282
G L+ A + D+M K L T+N +I G+ K A +L +EM S+G +G+
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T+++C++ C R V ++R S +L T LI CK + A ++ +
Sbjct: 439 TSVICLL--CSHLMFDSALRFVGEMLLRNMSPGGGLL-TTLISGLCKHGKHSKALELWFQ 495
Query: 343 MTNRNLV----SWNAMILGHCIHGSPEDGLSLFDEMVG----MDKVK---------GEVE 385
N+ V + NA++ G C G ++ + E++G MD+V G+ +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 386 IDES-PCADRGVVR-LQPDEVTF 406
+DE+ D V R L+PD T+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTY 578
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 175 QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAG 230
Q + GF N+L+H + G + A + +L R D S+N+++ G
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 231 DLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMV 286
L A D M + L T++I+I G A++ + + G+ + T
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 287 CVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR 346
++ C ++ R +EG+ ++ + + ++ LI YC+ R+ +A + E M ++
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 347 ----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
N ++ ++I G I E+ LF+EM
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + + +I CK+ Q F+ + PN+ + LI + +G + +
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEA 229
+ G SLI + V+ A++LF+ M L ++ + +++DGY +
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 230 GDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
G + L M KN+ +T+ +MI G+ + N A +L EM G+ ++ T
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 132/359 (36%), Gaps = 33/359 (9%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
NT+I YCK+ A+ L F N +F +I + S + +++
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSS 234
+ +LI G A L+ L + D + N+++ G EAG L
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 235 AHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
A + + + + V++N +ISG + A EM GLK + T ++
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL-- 348
+++E R + + +ID CK R E F+ M ++N+
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 349 --VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTF 406
V +N +I +C G L L ++M K KG + P+ T+
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDM----KHKG----------------ISPNSATY 683
Query: 407 IGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNM 465
+ + F++M + GL+PN H + + G + + E LR M
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 33/323 (10%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + T I+A+CK A + + PN TF +I G G
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++++ G + L + L+ + A + M + ++ +N+++D ++EA
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 230 GDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGL---KGNA 282
G L+ A + D+M K L T+N +I G+ K A +L +EM S+G +G+
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T+++C++ C R V ++R S +L T LI CK + A ++ +
Sbjct: 439 TSVICLL--CSHLMFDSALRFVGEMLLRNMSPGGGLL-TTLISGLCKHGKHSKALELWFQ 495
Query: 343 MTNRNLV----SWNAMILGHCIHGSPEDGLSLFDEMVG----MDKVK---------GEVE 385
N+ V + NA++ G C G ++ + E++G MD+V G+ +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 386 IDES-PCADRGVVR-LQPDEVTF 406
+DE+ D V R L+PD T+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTY 578
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 175 QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAG 230
Q + GF N+L+H + G + A + +L R D S+N+++ G
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 231 DLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMV 286
L A D M + L T++I+I G A++ + + G+ + T
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 287 CVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR 346
++ C ++ R +EG+ ++ + + ++ LI YC+ R+ +A + E M ++
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 347 ----NLVSWNAMILGHCIHGSPEDGLSLFDEM 374
N ++ ++I G I E+ LF+EM
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + + +I CK+ Q F+ + PN+ + LI + +G + +
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEA 229
+ G SLI + V+ A++LF+ M L ++ + +++DGY +
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 230 GDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
G + L M KN+ +T+ +MI G+ + N A +L EM G+ ++ T
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 132/359 (36%), Gaps = 33/359 (9%)
Query: 119 NTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIK 178
NT+I YCK+ A+ L F N +F +I + S + +++
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 179 NGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAGDLSS 234
+ +LI G A L+ L + D + N+++ G EAG L
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 235 AHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVT 290
A + + + + V++N +ISG + A EM GLK + T ++
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 291 ACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNL-- 348
+++E R + + +ID CK R E F+ M ++N+
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 349 --VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTF 406
V +N +I +C G L L ++M K KG + P+ T+
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDM----KHKG----------------ISPNSATY 683
Query: 407 IGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNM 465
+ + F++M + GL+PN H + + G + + E LR M
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 8/266 (3%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D + +I CK AQ + L PN +T+ +I + G ++
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
+I+ + + N+LI G + A L D ML R D ++NSM+ G+ +
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 230 GDLSSAHALFDVMPDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVV 289
A +FD+M ++VT+N +I + +A+ ++L RE+ GL N TT ++
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 290 TACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFE--RMTNRN 347
L + + +I I L+ +C+ ++E A +FE +M+ +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 348 L--VSWNAMILGHCIHGSPEDGLSLF 371
L V++N +I G C ++ LF
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLF 560
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 125/304 (41%), Gaps = 29/304 (9%)
Query: 112 PLDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTF----------------VP 155
PL+ + N +I +C H + + + + F P+ TF +
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197
Query: 156 LIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR- 214
L G TG + Q+++ G V+ N+LI+ G V A L + M+ +
Sbjct: 198 LFGYMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 215 ---DLASWNSMVDGYLEAGDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYAL 267
D+ ++ ++V+G + GD SA L M + ++ V ++ +I K + A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 268 KLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMY 327
LF EM G+ N T C++ R + + + +I ++ ALI
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 328 CKCRRVELATRVFERMTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGE 383
K ++ A ++ + M +R + V++N+MI G C H +D +FD M D V
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN 436
Query: 384 VEID 387
ID
Sbjct: 437 TIID 440
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 29/286 (10%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKC 172
+D T+++ CK D A + P+ + +I G +
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 173 HAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLE 228
+++++ G + N +I + G A+ L M+ R D+ ++N+++ ++
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 229 AGDLSSAHALFDVM------PDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
G L A L D M PD VT+N MI GF K A +F M S +
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDT--VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDV 432
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTA----LIDMYCKCRRVELATR 338
T ++ R+ R+ EG ++R SR L+ +T LI +C+ + A
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQ----LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 339 VFERMTNRNL----VSWNAMILGHCIHGSPEDGLSLFDEMVGMDKV 380
+F+ M + + ++ N ++ G C + E+ L LF E++ M K+
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKI 533
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTF-VPLIGSCGNTGCIVSGRKC 172
+T NT+I +C+ + + AQ + + P++ T + L G C N +
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 173 HA-QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYL 227
Q+ K D+V N +IH V A LF S+ + D+ ++N M+ G+
Sbjct: 526 EVIQMSKIDLDTV--AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 228 EAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNAT 283
+S A+ LF M D + T+N +I G LKA +++L EM S G G+A
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 284 TM 285
T+
Sbjct: 644 TI 645
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 121/299 (40%), Gaps = 34/299 (11%)
Query: 251 NIMIS---GFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGS 307
+IMI F K AL + S+ + + ++ + CG + L+E ++VHG
Sbjct: 220 DIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGK 279
Query: 308 IIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDG 367
I S L + L++MY C A VFE+M+ +NL +W +I +G ED
Sbjct: 280 ISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDA 339
Query: 368 LSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFK 427
+ +F K +G + PD F GI G +F+
Sbjct: 340 IDMFSRF----KEEGNI----------------PDGQLFRGIFYACGMLGDVDEGLLHFE 379
Query: 428 QMTDVFGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMAKFDGDMSRESMLWANLLALCR 487
M+ +G+ P+ + + A G +DEA + + M M +W L+ L R
Sbjct: 380 SMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMP-----MEPNVDVWETLMNLSR 434
Query: 488 FRRDVYLGEQFAKLLVDMYPKNLACYQFLLIIYAVAAQWENVSTVQKLMKERRLGIIPG 546
++ LG+ A+++ + P L I A S V+K ++R GI+ G
Sbjct: 435 VHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKA------SDVEKESLKKRSGILHG 487
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 47/274 (17%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
+ + + +I YCK+ + A Y L PN F L+ +V+ R
Sbjct: 268 NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF 327
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEA 229
++K G D L V N LIH + G++ A L M L+ D+ ++ +++G
Sbjct: 328 VHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIE 387
Query: 230 GDLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
++ A+ LF M ++ + T+N +I G+ K N AL L EM + G++ N T
Sbjct: 388 DQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
+ LID YC R ++ A ++ MT
Sbjct: 448 -----------------------------------STLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 346 R----NLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+ ++V++ A+I H + ++ L L+ +M+
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 20/278 (7%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLI-GSCGNTGCIVSGRKC 172
+ + N +I +CKS + A P+ +T+ LI G C + R
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL- 396
Query: 173 HAQVIKNGFDSVLP---VQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDG 225
Q +KN + + P NSLIH Y +++ A L M A ++ ++++++DG
Sbjct: 397 -FQKMKN--ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Query: 226 YLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGN 281
Y D+ +A L+ M K ++VT+ +I K N AL+L+ +M G+ N
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
Query: 282 ATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFE 341
T C+V + RL + + S + + T LI+ C+ + A+R F
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573
Query: 342 RM----TNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
M ++ S+ +M+ GH D + L +M+
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 54/288 (18%)
Query: 113 LDTFCVNTVISAYCKSHDPHLAQVF-YFRSLRFRFF-PNSYTFVPLIGSCGNTGCIVSGR 170
LD + +I CK D L F F + + F + + LI G G
Sbjct: 245 LDAVKYSIIIDGLCK--DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 171 KCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGY 226
K +IK + ++LI + G ++ A L M+ R D ++ S++DG+
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 227 LEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNA 282
+ L A+ + D+M K N+ T+NI+I+G+ KA L+LFR+M G+ +
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 283 TTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFER 342
T LI +C+ ++E+A +F+
Sbjct: 423 VTY-----------------------------------NTLIQGFCELGKLEVAKELFQE 447
Query: 343 MTNR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEI 386
M +R ++VS+ ++ G C +G PE L +F++ ++K K E++I
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK---IEKSKMELDI 492
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT NT+I +C+ +A+ + + R P+ ++ L+ + G +
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEA 229
++ K+ + + + N +IH + V A LF S+ + D+ ++N M+ G +
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK 540
Query: 230 GDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G LS A LF M + N T+NI+I L + + KL E+ G +A+T+
Sbjct: 541 GSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTV 600
Query: 286 VCVV 289
VV
Sbjct: 601 KMVV 604
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Query: 243 PDKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGR 302
P L+ ++ + S + + L L ++M G+ N T+ ++ C R +L
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 303 SVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGH 358
S G II++ + + LI+ C RV A + +RM L++ NA++ G
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 359 CIHGSPEDGLSLFDEMV 375
C++G D + L D MV
Sbjct: 188 CLNGKVSDAVLLIDRMV 204
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 8/196 (4%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
DT ++I +CK + A + PN TF LI I G +
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEA 229
++ G + N+LI + + G ++VA+ LF M++R D+ S+ ++DG +
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 230 GDLSSAHALFDVMP----DKNLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G+ A +F+ + + ++ +NI+I G A A LF + G+K + T
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 286 VCVVTACGRSARLKEG 301
++ + L E
Sbjct: 531 NIMIGGLCKKGSLSEA 546
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 130/291 (44%), Gaps = 51/291 (17%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D F + V++AYC+S + A VF ++
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAMVF-------------------------------AKETE 252
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQ----VARVLFDSMLARDLASWNSMVDGYLEA 229
+ + G + + NSLI+ YA GDV+ V R++ + ++R++ ++ S++ GY +
Sbjct: 253 SSL---GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKK 309
Query: 230 GDLSSAHALFDVMPDKNLVT----WNIMISGFLKARNPGYALKLFREMGSVGLKGNATTM 285
G + A +F+++ +K LV + +++ G+ + A+++ M +G++ N T
Sbjct: 310 GLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTIC 369
Query: 286 VCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTN 345
++ +S +L E + + + L+D YC+ V+ A ++ ++M
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 346 RNLV----SWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCA 392
+ +V ++N ++ G+ G+ D LSL+ M +K V DE C+
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM-----LKRGVNADEISCS 475
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 8/232 (3%)
Query: 120 TVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKN 179
++I YCK A+ + + + + + L+ TG I + H +I+
Sbjct: 301 SLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEI 360
Query: 180 GFDSVLPVQNSLIHMYADCGDVQVARVLFDSM----LARDLASWNSMVDGYLEAGDLSSA 235
G + + NSLI+ Y G + A +F M L D ++N++VDGY AG + A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 236 HALFDVMPDKNLV----TWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTA 291
L D M K +V T+NI++ G+ + L L++ M G+ + + ++ A
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 292 CGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERM 343
+ E + +++ + I +I CK +V A + + +
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 13/273 (4%)
Query: 115 TFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCHA 174
T C N++I+ YCKS A+ + R + P+ +T+ L+ G + K
Sbjct: 367 TIC-NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCD 425
Query: 175 QVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR----DLASWNSMVDGYLEAG 230
Q+ + + N L+ Y+ G L+ ML R D S +++++ + G
Sbjct: 426 QMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLG 485
Query: 231 DLSSAHALFDVMPDKNL----VTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMV 286
D + A L++ + + L +T N+MISG K A ++ + K T
Sbjct: 486 DFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQ 545
Query: 287 CVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRV----ELATRVFER 342
+ + LKE +V + R ++ + LI K R + +L + R
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 605
Query: 343 MTNRNLVSWNAMILGHCIHGSPEDGLSLFDEMV 375
+ ++ A+I G C G + + EM+
Sbjct: 606 GLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 146/366 (39%), Gaps = 38/366 (10%)
Query: 114 DTFCVNTVISAYCKSHDPHLAQVFYFRSLRFRFFPNSYTFVPLIGSCGNTGCIVSGRKCH 173
D N VI CK + A R L F P+ T+ L+ G + + +
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 174 AQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVLFDSMLAR-----DLASWNSMVDGYLE 228
++ K + + N+LIH + G + A+ + M+ D+ ++NS++ GY +
Sbjct: 346 YRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 229 AGDLSSAHALFDVMPDK----NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATT 284
G + A + M +K N+ ++ I++ GF K A + EM + GLK N
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 285 MVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMT 344
C+++A + R+ E + + R + + +LI C+ ++ A + M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 345 NR----NLVSWNAMILGHCIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQ 400
+ N V++N +I G ++ L +EMV SP
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV----------FQGSPL--------- 562
Query: 401 PDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEAEK 460
DE+T+ + RS F++M G P+ + N L +G+V+EA +
Sbjct: 563 -DEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 461 CLRNMA 466
+ M
Sbjct: 621 FQKEMV 626
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 33/280 (11%)
Query: 191 LIHMYADCGDVQVARVLFDSMLARDL----ASWNSMVDGYLEAGDLSSAHALFDVMPDK- 245
L+ + G + A + + M A L +N ++ + + + A +F MP K
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 246 ---NLVTWNIMISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGR 302
++ T+N +ISG + +AL L R+M S G+ N T ++ A R +KE R
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 303 SVHGSIIRMFSRSSLILDTALIDMYCKCRRVELATRVFERMTNR----NLVSWNAMILGH 358
+ ++ S I +LI C+ V+ A +FE+M + +S N +I G
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 359 CIHGSPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXX 418
C G E+ + EMV ++G PD VTF +
Sbjct: 610 CRSGMVEEAVEFQKEMV----LRGST----------------PDIVTFNSLINGLCRAGR 649
Query: 419 XXXGRSYFKQMTDVFGLKPNFAHLWCMANLLANAGLVDEA 458
G + F+++ G+ P+ + + L G V +A
Sbjct: 650 IEDGLTMFRKL-QAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 30/274 (10%)
Query: 202 QVARVLFDSMLARD----LASWNSMVDGYLEAGDLSSAHALFDVMPD----KNLVTWNIM 253
+VA +F ML+R L ++ ++ + ++ SA +L M N V + +
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 254 ISGFLKARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEG-RSVHGSIIRMF 312
I K AL+L EM +G +A T V+ + R+ E + V+ +IR F
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 313 SRSSLILDTALIDMYCKCRRVELATRVFERMTNRNLVSWNAMILGHCIHGSPEDGLSLFD 372
+ + L++ CK RV+ A +F R+ +V +N +I G HG +D ++
Sbjct: 319 APDDITYGY-LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLS 377
Query: 373 EMVGMDKVKGEVEIDESPCADRGVVRLQPDEVTFIGIXXXXXXXXXXXXGRSYFKQMTDV 432
+MV G+V PD T+ + M +
Sbjct: 378 DMV----------------TSYGIV---PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 433 FGLKPNFAHLWCMANLLANAGLVDEAEKCLRNMA 466
G KPN + + G +DEA L M+
Sbjct: 419 -GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 148 PNSYTFVPLIGSCGNTGCIVSGRKCHAQVIKNGFDSVLPVQNSLIHMYADCGDVQVARVL 207
PN+ T+ LI S G + Q+ + G +LI ++A G + +A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 208 FDSM----LARDLASWNSMVDGYLEAGDLSSAHALFDVMPDK----NLVTWNIMISGFLK 259
+ M L+ D +++ +++ +AG L +AH LF M D+ NLVT+NIM+ K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 260 ARNPGYALKLFREMGSVGLKGNATTMVCVVTACGRSARLKEGRSVHGSIIRMFSRSSLIL 319
ARN ALKL+R+M + G + + T V+ G L+E +V + + +
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 320 DTALIDMYCKCRRVELATRVFERMTNRNL 348
L+D++ K VE A + ++ M + L
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605