Miyakogusa Predicted Gene

Lj2g3v1670820.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1670820.2 Non Chatacterized Hit- tr|I3JS99|I3JS99_ORENI
Uncharacterized protein (Fragment) OS=Oreochromis
nilo,44.74,3e-19,SUBFAMILY NOT NAMED,NULL; HEPATOCELLULAR
CARCINOMA-ASSOCIATED ANTIGEN,NULL;
Methyltransf_16,Nicotina,CUFF.37636.2
         (123 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63855.3 | Symbols:  | Putative methyltransferase family prot...   194   1e-50
AT1G63855.1 | Symbols:  | Putative methyltransferase family prot...   192   4e-50
AT1G63855.2 | Symbols:  | Putative methyltransferase family prot...   161   1e-40
AT2G26810.3 | Symbols:  | Putative methyltransferase family prot...    45   8e-06

>AT1G63855.3 | Symbols:  | Putative methyltransferase family protein
           | chr1:23699557-23700954 REVERSE LENGTH=196
          Length = 196

 Score =  194 bits (493), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 108/124 (87%), Gaps = 4/124 (3%)

Query: 4   ISRHTY---GD-DLCISVIENMKEDYGLFVWPCSVILAEYVWQHRERFSGATVLELGAGT 59
           IS+H +   GD + CIS+IEN+KE+YGLFVWPCSVILAEYVWQHR RF  +++LELGAGT
Sbjct: 9   ISQHNFYGAGDSETCISIIENLKEEYGLFVWPCSVILAEYVWQHRSRFRDSSILELGAGT 68

Query: 60  SLPGLVAAKLGARVTLTDDSSRLEVLDNMRRVCDLNKLECNVLGLTWGVWDSSMFSLKPT 119
           SLPGLVAAK+GA VTLTDD+++ EVLDNMRRVC+LNKL CNVLGLTWGVWD+ +  L+P 
Sbjct: 69  SLPGLVAAKVGANVTLTDDATKPEVLDNMRRVCELNKLNCNVLGLTWGVWDAPILDLRPN 128

Query: 120 IILG 123
           IILG
Sbjct: 129 IILG 132


>AT1G63855.1 | Symbols:  | Putative methyltransferase family protein
           | chr1:23699956-23700954 REVERSE LENGTH=159
          Length = 159

 Score =  192 bits (488), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 108/124 (87%), Gaps = 4/124 (3%)

Query: 4   ISRHTY---GD-DLCISVIENMKEDYGLFVWPCSVILAEYVWQHRERFSGATVLELGAGT 59
           IS+H +   GD + CIS+IEN+KE+YGLFVWPCSVILAEYVWQHR RF  +++LELGAGT
Sbjct: 9   ISQHNFYGAGDSETCISIIENLKEEYGLFVWPCSVILAEYVWQHRSRFRDSSILELGAGT 68

Query: 60  SLPGLVAAKLGARVTLTDDSSRLEVLDNMRRVCDLNKLECNVLGLTWGVWDSSMFSLKPT 119
           SLPGLVAAK+GA VTLTDD+++ EVLDNMRRVC+LNKL CNVLGLTWGVWD+ +  L+P 
Sbjct: 69  SLPGLVAAKVGANVTLTDDATKPEVLDNMRRVCELNKLNCNVLGLTWGVWDAPILDLRPN 128

Query: 120 IILG 123
           IILG
Sbjct: 129 IILG 132


>AT1G63855.2 | Symbols:  | Putative methyltransferase family protein
           | chr1:23700272-23700954 REVERSE LENGTH=111
          Length = 111

 Score =  161 bits (407), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 76/103 (73%), Positives = 91/103 (88%), Gaps = 4/103 (3%)

Query: 4   ISRHTY---GD-DLCISVIENMKEDYGLFVWPCSVILAEYVWQHRERFSGATVLELGAGT 59
           IS+H +   GD + CIS+IEN+KE+YGLFVWPCSVILAEYVWQHR RF  +++LELGAGT
Sbjct: 9   ISQHNFYGAGDSETCISIIENLKEEYGLFVWPCSVILAEYVWQHRSRFRDSSILELGAGT 68

Query: 60  SLPGLVAAKLGARVTLTDDSSRLEVLDNMRRVCDLNKLECNVL 102
           SLPGLVAAK+GA VTLTDD+++ EVLDNMRRVC+LNKL CNV+
Sbjct: 69  SLPGLVAAKVGANVTLTDDATKPEVLDNMRRVCELNKLNCNVI 111


>AT2G26810.3 | Symbols:  | Putative methyltransferase family protein
           | chr2:11434317-11436078 REVERSE LENGTH=209
          Length = 209

 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 55/96 (57%), Gaps = 6/96 (6%)

Query: 4   ISRHTYGDD-LCISVIENMKEDY---GLFVWPCSVILAEYVWQHRERFSGATVLELGAGT 59
           +++ T+G   L +  +++   D+   G  VWP ++++  Y+ ++ +   G +VLELG+G 
Sbjct: 34  LTKFTFGSHVLELYCLQSASTDFDLTGQLVWPGAMLMNGYLSENADILQGCSVLELGSGV 93

Query: 60  SLPGLVAAKLGARVTLTDDSSRLEVLDNMRRVCDLN 95
            + G++ +K   +V  TD +   EVL  +++  DL+
Sbjct: 94  GITGVLCSKFCRKVIFTDHND--EVLKILKKNIDLH 127