Miyakogusa Predicted Gene
- Lj2g3v1647890.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1647890.1 tr|G7JYR9|G7JYR9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,82.23,0,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.37599.1
(767 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 529 e-150
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 472 e-133
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 440 e-123
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 421 e-117
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 410 e-114
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 401 e-112
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-107
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 7e-99
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 1e-98
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 5e-96
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 1e-94
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 342 4e-94
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 1e-91
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 333 2e-91
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 4e-91
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 4e-90
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 325 8e-89
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 324 1e-88
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 7e-88
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 1e-86
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 3e-86
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 316 4e-86
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 5e-86
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 313 2e-85
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 313 2e-85
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 313 4e-85
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 312 6e-85
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 6e-85
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 312 7e-85
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 9e-85
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 9e-85
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 311 1e-84
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 310 3e-84
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 309 4e-84
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 9e-84
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 9e-84
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 304 2e-82
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 304 2e-82
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 302 5e-82
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 302 6e-82
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 302 7e-82
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 302 7e-82
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 298 7e-81
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 1e-80
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 297 2e-80
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 5e-80
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 6e-80
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 9e-80
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 2e-79
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 2e-79
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 7e-79
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 7e-79
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 7e-79
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 290 2e-78
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 289 5e-78
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 289 6e-78
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 7e-78
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 288 1e-77
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 1e-76
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 283 3e-76
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 6e-75
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 1e-74
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 5e-74
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 5e-73
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 7e-73
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 7e-73
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 8e-73
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 9e-73
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 271 2e-72
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 2e-72
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 2e-72
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 4e-72
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 269 5e-72
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 269 5e-72
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 266 4e-71
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 265 8e-71
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 5e-70
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 5e-70
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 7e-70
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 8e-70
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 2e-68
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 1e-67
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 4e-67
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 1e-66
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 249 6e-66
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 2e-65
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 7e-65
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 3e-64
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 4e-64
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 242 7e-64
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 3e-63
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 2e-62
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 2e-62
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 1e-60
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 4e-60
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 6e-60
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 8e-60
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 226 5e-59
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 6e-59
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 224 1e-58
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 220 2e-57
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 6e-57
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 219 8e-57
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 3e-55
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 7e-55
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 4e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 7e-54
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 1e-52
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 4e-52
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 5e-52
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 6e-52
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 202 9e-52
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 2e-51
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 200 4e-51
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 8e-51
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 1e-49
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 1e-48
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 3e-47
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 4e-46
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 4e-45
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 7e-42
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 3e-40
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 7e-40
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 2e-39
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 2e-39
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 1e-38
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 5e-38
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 7e-38
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 155 1e-37
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 1e-37
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 154 2e-37
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 7e-37
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 1e-36
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 1e-36
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 4e-36
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 5e-36
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 149 9e-36
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 1e-35
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 147 3e-35
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 6e-35
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 6e-35
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 1e-34
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 3e-34
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 8e-33
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 2e-32
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 6e-32
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 131 2e-30
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 2e-30
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 3e-30
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 6e-30
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 8e-30
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 127 2e-29
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 4e-29
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 126 5e-29
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 5e-28
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 6e-28
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 8e-28
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 9e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 1e-27
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 120 4e-27
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-27
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 115 2e-25
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 4e-25
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 1e-24
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 4e-23
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 106 6e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 104 2e-22
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 104 3e-22
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 6e-22
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 96 1e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 95 2e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 4e-19
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 9e-19
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 91 2e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-17
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 6e-17
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 86 9e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 81 3e-15
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 78 2e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 76 8e-14
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 4e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 73 9e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 72 2e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 72 2e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 71 3e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 69 2e-11
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 1e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-10
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 63 7e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 8e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 5e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 8e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 59 2e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-08
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 2e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 54 6e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 3e-06
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 51 3e-06
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 529 bits (1363), Expect = e-150, Method: Compositional matrix adjust.
Identities = 249/612 (40%), Positives = 389/612 (63%), Gaps = 3/612 (0%)
Query: 132 WALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKD 191
W + I+ Y R G+ +A + + +P + + +N +I+GY + G+F A K+F+ MP +D
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMP-RWSSVSYNGMISGYLRNGEFELARKLFDEMPERD 125
Query: 192 LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
LVS+N M+ GY +N +G A FE M E++V SWN M+SG+ +G + AR +F+++P
Sbjct: 126 LVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
N VSW +L + ++ K+ EA LF S +VSWN ++ + + +I EA + F M
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 312 PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN 371
+D VSW TII GY + GK+DEAR+++++ P +D+ TA++SG IQ V+EA ++F+
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI 431
++ R+ + WN+M+AG+ Q RM+ A +LF MP +N +WNTMI+GYAQ G++ A+N+
Sbjct: 306 KMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
F M +R+ VSW ++I G+ Q+ F+AL+ V M REG + ++S+F
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
++G QLH ++K GY FV NAL+ MY KCG +E A +F + D++SWN++I+GY
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
+ +G+ A + F+ M E + PD T + +LSACSH GL ++G F M +D+ + P
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLS 671
++HY+C+VDLLGR G LE+A N+++ M + +A +WG+LLGA RVH N E+ E AA ++
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 672 ELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDD 731
+EP N+ Y+ LSN++A +GRW +V +LRV MRDK K+PG SWIE+QN+ F D
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 665
Query: 732 SGRLRPETIQII 743
PE +I
Sbjct: 666 E--FHPEKDEIF 675
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 254/432 (58%), Gaps = 40/432 (9%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
+ G+ EA+RVF + V+YN MIS + +NG+ AR+LFD+M +R+LVSWN MI G
Sbjct: 76 RTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKG 135
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAV 167
Y+ N + +A +LF++MPERD SW M++ Y + G ++ AR + + +P+K D + WNA+
Sbjct: 136 YVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVS-WNAL 194
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN 227
++ Y + + +A +F LVS+N +L G+ + K+ A FF+ M ++VVSWN
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 228 LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
+++G+ SG + ARQLF++ P + +W M+ G+ ++ + EAR LFD MP +N VS
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS 314
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
WNAM+A Y Q +++ A +LF MP ++ +W T+I GY + GK+ EA+ ++++MP +D
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTR------------------------------- 376
+ A+++G Q+G EA ++F Q+
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 377 ------DTICW--NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSA 428
+T C+ N+++ +C+ G ++EA DLF++M K+ VSWNTMI+GY++ G + A
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 429 ENIFQAMEERNI 440
F++M+ +
Sbjct: 495 LRFFESMKREGL 506
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 256/474 (54%), Gaps = 18/474 (3%)
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
K + ++ WN+ +S ++ +G + A ++F+++P ++VS+ M+ G+ R+G+ AR+L
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAR 336
FD MP +++VSWN MI Y ++ + +A +LF MP +D SW T+++GY + G +D+AR
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 337 EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
V+++MP K+ + AL+S +Q +++EA +F + WN ++ GF + ++ E
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVE 237
Query: 397 ALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
A F M ++ VSWNT+I+GYAQ+G++D A +F +++ +W ++++G++QN +
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMV 297
Query: 457 FDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
+A + M + ++ ++ ++ +L + + ++ N +
Sbjct: 298 EEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNTM 349
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
I YA+CG++ A+ +F + D +SW ++I+GY+ +G++ EA + F QM E ++
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FN 633
+F LS C+ G L +V+ E + L+ + + G +EEA F
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 634 VVRGMDVKANAGLWGSLLGACRVHKNLEIGE--FAAMRLSELEPHNASNYITLS 685
+ G D+ + W +++ H E+ F +M+ L+P +A+ LS
Sbjct: 469 EMAGKDIVS----WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 181/351 (51%), Gaps = 21/351 (5%)
Query: 30 SIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQL 89
S+ + V + N I + GK++EA ++F + +++ T+ +M+S + +N + +AR+L
Sbjct: 244 SMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303
Query: 90 FDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAR 149
FDKM +RN VSWN M+AGY+ +E A +LFDVMP R+ +W MIT Y + GK+ +A+
Sbjct: 304 FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 363
Query: 150 ELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQN 205
L + +P K D W A+IAGY++ G +A ++F M + + S++S L+
Sbjct: 364 NLFDKMP-KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 206 GKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
+ L ++ E N ++ + G + A LF+++ + VSW TM+
Sbjct: 423 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 482
Query: 262 CGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV 317
G++RHG A R F+SM + + + A+++A + +D+ + F M GV
Sbjct: 483 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
Query: 318 -----SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV 363
+ +++ R G L++A + MP + A+ L+ RV
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMP---FEPDAAIWGTLLGASRV 590
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 154/311 (49%), Gaps = 46/311 (14%)
Query: 296 AQDLQIDEA-VKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
A QI ++ K +K D W I+ Y+R G+ +EA V+ +MP + ++
Sbjct: 43 ATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMI 102
Query: 355 SGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT 414
SG ++ G + A K+F+++ RD + WN MI G+ ++ + +A +LF MP+++ SWNT
Sbjct: 103 SGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNT 162
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
M+SGYAQ G +D A ++F M E+N VSWN+L++ ++QNS +A ++ RE
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEA--CMLFKSRE----- 215
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS-NALIAMYAKCGRVESAEQVF 533
N VS N L+ + K ++ A Q F
Sbjct: 216 ---------------------------------NWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
++ D++SWN++I+GYA +G EA +Q+ E V D T+ M+S +
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 594 QGLDLFKCMVE 604
+ +LF M E
Sbjct: 299 EARELFDKMPE 309
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/591 (37%), Positives = 361/591 (61%), Gaps = 2/591 (0%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N I ++ G+ +A K+F+ K + S+NSM+AGY N A F++M ++N++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
SWN +VSG++ +G++ AR++F+ +P N VSW ++ G+ +GK+ A LF MP KN
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN 140
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
VSW M+ + QD +ID+A KL+ +P KD ++ T++I+G + G++DEARE++++M
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
+ + T +++G Q RVD+A K+F+ + + + W SM+ G+ Q+GR+++A +LF M
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
P K ++ N MISG Q G++ A +F +M+ERN SW ++I +N +AL +
Sbjct: 261 PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI 320
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
LM ++G +P T G Q+H +++ + D++V++ L+ MY KCG
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG 380
Query: 525 RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQM-LSEEVVPDQVTFIGML 583
+ ++ +F D+I WNS+ISGYA +G EA K F +M LS P++VTF+ L
Sbjct: 381 ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
SACS+AG+ +GL +++ M F ++P+ HY+C+VD+LGR GR EA ++ M V+ +
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
A +WGSLLGACR H L++ EF A +L E+EP N+ YI LSNM+A GRW +V LR L
Sbjct: 501 AAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKL 560
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCFLSDD-SGRLRPETIQIILNAISAHMRD 753
M+ + K PGCSW EV+N++ F + E+I IL+ + +R+
Sbjct: 561 MKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLRE 611
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 250/441 (56%), Gaps = 45/441 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N +I HL ++GK+ EA ++F + K++ ++NSM++ + N DAR+LFD+M RN++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 159
SWN +++GY+ N ++EA K+FD+MPER+ SW ++ Y GK++ A L +P+K
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK- 139
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+ W ++ G+ + G+ DA K++ ++P KD ++ SM+ G + G++ A F++M+
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
E++V++W MV+G+ + + AR++F+ +P VSW +ML G+ ++G+I +A LF+
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVG--------- 330
MP K V++ NAMI+ Q +I +A ++F M ++ SW T+I + R G
Sbjct: 260 MPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF 319
Query: 331 --------------------------KLDEAREVYNQM-PCK---DIAAETALMSGLIQT 360
L ++V+ Q+ C+ D+ + LM+ I+
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-----KKNSVSWNTM 415
G + ++ +F++ ++D I WNS+I+G+ G +EAL +F +MP K N V++
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 416 ISGYAQAGQMDSAENIFQAME 436
+S + AG ++ I+++ME
Sbjct: 440 LSACSYAGMVEEGLKIYESME 460
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 268/504 (53%), Gaps = 16/504 (3%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R +S TI T N I+ ++ GKI +AR+LFD +++ SWN+M+AGY N M +
Sbjct: 9 RTYSTTIPPP--TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRD 66
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQ 176
A KLFD MP+R+ SW +++ Y + G++++AR++ +L+P++ + W A++ GY G+
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER-NVVSWTALVKGYVHNGK 125
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS 236
AE +F MP K+ VS+ ML G+ Q+G++ A +E + +K+ ++ M+ G
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKE 185
Query: 237 GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
G + AR++F+++ + ++W TM+ G+ ++ ++ +AR++FD MP K VSW +M+ Y
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYV 245
Query: 297 QDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSG 356
Q+ +I++A +LF MP K ++ +I+G + G++ +AR V++ M ++ A+ ++
Sbjct: 246 QNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKI 305
Query: 357 LIQTGRVDEASKMF---NQLSTRDTICWNSMIAGFCQS------GRMDEALDLFRQMPKK 407
+ G EA +F + R T I C S G+ A L R
Sbjct: 306 HERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA-QLVRCQFDV 364
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+ + +++ Y + G++ ++ IF ++I+ WNS+I+G+ + L +ALK M
Sbjct: 365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP 424
Query: 468 REGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA-LIAMYAKCGR 525
G KP++ TF + G +++E + + + A ++ M + GR
Sbjct: 425 LSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGR 484
Query: 526 VESAEQVFTAIEC-VDLISWNSLI 548
A ++ ++ D W SL+
Sbjct: 485 FNEAMEMIDSMTVEPDAAVWGSLL 508
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 229/428 (53%), Gaps = 38/428 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G+++EA +VF +N+V++ +++ + NGK+ A LF KM ++N VSW M+ G
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIG 150
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAV 167
+L + +++A KL++++P++DN + MI ++G++++ARE+ + + ++ W +
Sbjct: 151 FLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER-SVITWTTM 209
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN 227
+ GY + + DA K+F++MP K VS+ SML GY QNG++ A FE M K V++ N
Sbjct: 210 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 228 LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLF---------D 278
M+SG G+++ AR++F+ + N SW T++ R+G EA LF
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 279 SMP--------CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVG 330
+ P C ++ S + +AQ ++ V +++ + ++ YI+ G
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA---------SVLMTMYIKCG 380
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL----STR-DTICWNSMI 385
+L +++ ++++ P KDI +++SG G +EA K+F ++ ST+ + + + + +
Sbjct: 381 ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440
Query: 386 AGFCQSGRMDEALDLFRQMP-----KKNSVSWNTMISGYAQAGQMDSAENIFQAME-ERN 439
+ +G ++E L ++ M K + + M+ +AG+ + A + +M E +
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
Query: 440 IVSWNSLI 447
W SL+
Sbjct: 501 AAVWGSLL 508
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 181/349 (51%), Gaps = 21/349 (6%)
Query: 31 IGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLF 90
I K + I L K G+V+EA +F ++++T+ +M++ + +N ++ DAR++F
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF 226
Query: 91 DKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARE 150
D M ++ VSW +M+ GY+ N +E+A +LF+VMP + + MI+ +KG++ KAR
Sbjct: 227 DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARR 286
Query: 151 LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM-------PVKDLVSYNSMLAGYT 203
+ + + ++ D A W VI + + G +A +F LM L+S S+ A
Sbjct: 287 VFDSMKERND-ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA 345
Query: 204 --QNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
+GK A + +V +++++ ++ G+L ++ +F++ P+ + + W +++
Sbjct: 346 SLHHGKQVHA-QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Query: 262 CGFARHGKITEARRLFDSMPC-----KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDG 316
G+A HG EA ++F MP N V++ A ++A + ++E +K++ M G
Sbjct: 405 SGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFG 464
Query: 317 VS-----WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT 360
V + +++ R G+ +EA E+ + M + AA + G +T
Sbjct: 465 VKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRT 513
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/560 (37%), Positives = 335/560 (59%)
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN 227
I+ ++ G+ ++A K F+ + K + S+NS+++GY NG A F++M+E+NVVSWN
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 228 LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
+VSG++ + + AR +FE +P N VSW M+ G+ + G + EA LF MP +N VS
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
W M D +ID+A KL+ MP KD V+ T +I G R G++DEAR ++++M +++
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
T +++G Q RVD A K+F + + + W SM+ G+ SGR+++A + F MP K
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
++ N MI G+ + G++ A +F ME+R+ +W +I + + +AL M
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
++G +P + Q G Q+H ++++ + +D++V++ L+ MY KCG +
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
A+ VF D+I WNS+ISGYA +G EA K F +M S +P++VT I +L+ACS
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLW 647
+AG +GL++F+ M F + P EHYSC VD+LGR G++++A ++ M +K +A +W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 648 GSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
G+LLGAC+ H L++ E AA +L E EP NA Y+ LS+++A +W +V +R MR
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
Query: 708 RAGKLPGCSWIEVQNQIQCF 727
K PGCSWIEV ++ F
Sbjct: 564 NVSKFPGCSWIEVGKKVHMF 583
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 249/448 (55%), Gaps = 44/448 (9%)
Query: 38 NKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRN 97
N + +I L ++GK+ EA + F + K + ++NS++S + NG +ARQLFD+MS+RN
Sbjct: 19 NCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN 78
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD 157
+VSWN +++GY+ N M+ EA +F++MPER+ SW M+ Y ++G + +A L +P+
Sbjct: 79 VVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 158 KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
+ + W + G G+ A K++++MPVKD+V+ +M+ G + G++ A F++
Sbjct: 139 R-NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 218 MAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLF 277
M E+NVV+W M++G+ + + AR+LFE +P VSW +ML G+ G+I +A F
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 278 DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEARE 337
+ MP K V++ NAMI + + +I +A ++F M +D +W +I Y R G EA +
Sbjct: 258 EVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 338 VYNQMP------------------------------------CK---DIAAETALMSGLI 358
++ QM C+ D+ + LM+ +
Sbjct: 318 LFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYV 377
Query: 359 QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNT 414
+ G + +A +F++ S++D I WNS+I+G+ G +EAL +F +MP N V+
Sbjct: 378 KCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIA 437
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVS 442
+++ + AG+++ IF++ME + V+
Sbjct: 438 ILTACSYAGKLEEGLEIFESMESKFCVT 465
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 194/386 (50%), Gaps = 43/386 (11%)
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
V+ + +S G ++ AR+ F+ + SW +++ G+ +G EAR+LFD M +
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER 77
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMP 343
NVVSWN +++ Y ++ I EA +F MP ++ VSWT ++ GY++ G + EA ++ +MP
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
++ + T + GLI GR+D+A K+++ + +D + +MI G C+ GR+DEA +F +
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 404 MPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
M ++N V+W TMI+GY Q ++D A +F+ M E+ VSW S++ G+ + DA +
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
+M KP + NA+I + +
Sbjct: 258 EVM---PMKP------------------------------------VIACNAMIVGFGEV 278
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
G + A +VF +E D +W +I Y G+ +EA F QM + V P + I +L
Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 584 SACSHAGLANQGLD----LFKCMVED 605
S C+ G L +C +D
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDD 364
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 179/352 (50%), Gaps = 21/352 (5%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
K V I L + G+V+EA +F +N+VT+ +MI+ + +N ++ AR+LF+ M
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM 229
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE 153
++ VSW +M+ GY + +E+A + F+VMP + + MI + G++ KAR + +
Sbjct: 230 PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFD 289
Query: 154 LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM-------PVKDLVSYNSMLAGYT--Q 204
L+ D+ D A W +I Y +KG +A +F M L+S S+ A Q
Sbjct: 290 LMEDR-DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQ 348
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGF 264
G+ A H + +V +++++ +V G+L A+ +F++ + + + W +++ G+
Sbjct: 349 YGRQVHA-HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 407
Query: 265 ARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-- 318
A HG EA ++F MP N V+ A++ A + +++E +++F M K V+
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 319 ---WTTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEA 366
++ ++ R G++D+A E+ M K D AL+ R+D A
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/556 (36%), Positives = 342/556 (61%), Gaps = 4/556 (0%)
Query: 206 GKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-PNAVSWVTMLCGF 264
GK+ A F+ + E++VV+W +++G++ GD+ AR+LF+++ + N V+W M+ G+
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIIN 324
R +++ A LF MP +NVVSWN MI YAQ +ID+A++LF +MP ++ VSW +++
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
++ G++DEA ++ +MP +D+ + TA++ GL + G+VDEA ++F+ + R+ I WN+M
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAM 239
Query: 385 IAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
I G+ Q+ R+DEA LF+ MP+++ SWNTMI+G+ + +M+ A +F M E+N++SW
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWT 299
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
++ITG+++N +AL M R+G KP+ T+ G Q+H+ I K
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVF-TAIECV-DLISWNSLISGYALNGYAIEAF 561
S + + V++AL+ MY+K G + +A ++F + C DLISWNS+I+ YA +G+ EA
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDL 621
+ + QM P VT++ +L ACSHAGL +G++ FK +V D ++ EHY+CLVDL
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDL 479
Query: 622 LGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNY 681
GR GRL++ N + D + + +G++L AC VH + I + ++ E +A Y
Sbjct: 480 CGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTY 539
Query: 682 ITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQ 741
+ +SN++A G+ EE +R+ M++K K PGCSW++V Q F+ D + E +
Sbjct: 540 VLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALD 599
Query: 742 IILNAISAHMRDKFNV 757
IL+ + MR NV
Sbjct: 600 SILSDLRNKMRKNKNV 615
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 234/378 (61%), Gaps = 15/378 (3%)
Query: 114 VEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAK 173
+ EA KLFD +PERD +W +IT Y + G + +AREL + V + + W A+++GY +
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLR 121
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGF 233
Q S AE +F MP +++VS+N+M+ GY Q+G++ AL F++M E+N+VSWN MV
Sbjct: 122 SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKAL 181
Query: 234 VNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIA 293
V G + A LFE++P + VSW M+ G A++GK+ EARRLFD MP +N++SWNAMI
Sbjct: 182 VQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMIT 241
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
YAQ+ +IDEA +LF MP +D SW T+I G+IR ++++A ++++MP K++ + T +
Sbjct: 242 GYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTM 301
Query: 354 MSGLIQTGRVDEASKMFNQLSTRDTICWN-----------SMIAGFCQSGRMDEALDLFR 402
++G ++ +EA +F+++ ++ N S +AG + ++ + + +
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLIS--K 359
Query: 403 QMPKKNSVSWNTMISGYAQAGQMDSAENIFQ--AMEERNIVSWNSLITGFLQNSLYFDAL 460
+ +KN + + +++ Y+++G++ +A +F + +R+++SWNS+I + + +A+
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 461 KSLVLMGREGKKPDQSTF 478
+ M + G KP T+
Sbjct: 420 EMYNQMRKHGFKPSAVTY 437
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 242/410 (59%), Gaps = 19/410 (4%)
Query: 43 IIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM-SQRNLVSW 101
I L K+GK+ EA ++F +++VT+ +I+ + K G + +AR+LFD++ S++N+V+W
Sbjct: 53 IGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTW 112
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDT 161
M++GYL + + A LF MPER+ SW MI Y + G+++KA EL + +P++ +
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER-NI 171
Query: 162 ACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
WN+++ ++G+ +A +F MP +D+VS+ +M+ G +NGK+ A F+ M E+
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER 231
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
N++SWN M++G+ + + A QLF+ +P + SW TM+ GF R+ ++ +A LFD MP
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP 291
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAR 336
KNV+SW MI Y ++ + +EA+ +F KM V ++ +I++ + L E +
Sbjct: 292 EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 337 EVYNQMPCKDIAAE-----TALMSGLIQTGRVDEASKMFNQ--LSTRDTICWNSMIAGFC 389
+++ Q+ K + + +AL++ ++G + A KMF+ + RD I WNSMIA +
Sbjct: 352 QIH-QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 410
Query: 390 QSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
G EA++++ QM K ++V++ ++ + AG ++ F+ +
Sbjct: 411 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDL 460
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 173/289 (59%), Gaps = 12/289 (4%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
++V + N I + G++++A+ +F +N+V++NSM+ + G+I +A LF++M
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE 153
+R++VSW M+ G N V+EA +LFD MPER+ SW MIT Y + ++++A +L +
Sbjct: 198 PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQ 257
Query: 154 LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
++P++ D A WN +I G+ + + + A +F+ MP K+++S+ +M+ GY +N + AL+
Sbjct: 258 VMPER-DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALN 316
Query: 214 FFEKM-----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGF 264
F KM + NV ++ ++S + L +Q+ + I N + +L +
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMY 376
Query: 265 ARHGKITEARRLFDS-MPC-KNVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
++ G++ AR++FD+ + C ++++SWN+MIA YA EA++++ +M
Sbjct: 377 SKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 209/401 (52%), Gaps = 31/401 (7%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
+++ + N + L + G+++EA+ +F +++V++ +M+ AKNGK+ +AR+LFD M
Sbjct: 169 RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE 153
+RN++SWN MI GY N+ ++EA +LF VMPERD SW MIT + R ++ KA L +
Sbjct: 229 PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 154 LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM----PVKDLV-SYNSMLAGYTQNGKM 208
+P+K + W +I GY + + +A VF+ M VK V +Y S+L+ + +
Sbjct: 289 RMPEK-NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 209 --GLALH--FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEK--IPNPNAVSWVTMLC 262
G +H + + +KN + + +++ + SG+L +AR++F+ + + +SW +M+
Sbjct: 348 VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIA 407
Query: 263 GFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS 318
+A HG EA +++ M + V++ ++ A + +++ ++ F + + +
Sbjct: 408 VYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
Query: 319 -----WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV-------DEA 366
+T +++ R G+L ++V N + C D + ++ V E
Sbjct: 468 LREEHYTCLVDLCGRAGRL---KDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEV 524
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
K + + D + M + +G+ +EA ++ +M +K
Sbjct: 525 VKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEK 565
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/603 (33%), Positives = 347/603 (57%), Gaps = 57/603 (9%)
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
+ G ++A +F + ++ V++N+M++GY + +M A F+ M +++VV+WN M+SG
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 233 FVNSGD---LSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN 289
+V+ G L AR+LF+++P+ ++ SW TM+ G+A++ +I EA LF+ MP +N VSW+
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWS 171
Query: 290 AMIAAYAQDLQIDEAVKLFIKMPHKDG--------------------------------- 316
AMI + Q+ ++D AV LF KMP KD
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGR 231
Query: 317 ----VSWTTIINGYIRVGKLDEAREVYNQMP---------------CKDIAAETALMSGL 357
++ T+I GY + G+++ AR +++Q+P CK++ + +++
Sbjct: 232 EDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY 291
Query: 358 IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMIS 417
++ G V A +F+Q+ RDTI WN+MI G+ RM++A LF +MP +++ SWN M+S
Sbjct: 292 LKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVS 351
Query: 418 GYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
GYA G ++ A + F+ E++ VSWNS+I + +N Y +A+ + M EG+KPD T
Sbjct: 352 GYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHT 411
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
++G Q+H+ ++K+ I D+ V NALI MY++CG + + ++F ++
Sbjct: 412 LTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 538 CV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
++I+WN++I GYA +G A EA F M S + P +TF+ +L+AC+HAGL ++
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
F M+ + IEP EHYS LV++ G+ EEA ++ M + + +WG+LL ACR+
Sbjct: 531 AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRI 590
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
+ N+ + AA +S LEP +++ Y+ L NM+A+ G W+E ++R+ M KR K G S
Sbjct: 591 YNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSS 650
Query: 717 WIE 719
W++
Sbjct: 651 WVD 653
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 240/464 (51%), Gaps = 64/464 (13%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N+++ + + G + EA +F +N VT+N+MIS + K +++ AR+LFD M +R++V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 100 SWNTMIAGYLHNS---MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVP 156
+WNTMI+GY+ +EEA KLFD MP RD+FSW MI+ Y + ++ +A L E +P
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKD------------------------- 191
++ + W+A+I G+ + G+ A +F MPVKD
Sbjct: 164 ER-NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 192 ----LVS--------YNSMLAGYTQNGKMGLALHFFEKMAE---------------KNVV 224
LVS YN+++ GY Q G++ A F+++ + KNVV
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
SWN M+ ++ GD+ SAR LF+++ + + +SW TM+ G+ ++ +A LF MP ++
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD 342
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
SWN M++ YA ++ A F K P K VSW +II Y + EA +++ +M
Sbjct: 343 AHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNI 402
Query: 345 K----DIAAETALMS---GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
+ D T+L+S GL+ + ++ + D N++I + + G + E+
Sbjct: 403 EGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMES 462
Query: 398 LDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+F +M K+ ++WN MI GYA G A N+F +M+ I
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 229/426 (53%), Gaps = 36/426 (8%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+ G + +EEA ++F ++ ++N+MIS +AKN +I +A LF+KM +RN VSW+
Sbjct: 113 VSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSA 172
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL----ELVPDKL 159
MI G+ N V+ A LF MP +D+ ++ + +L +A +L LV +
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRE 232
Query: 160 DTA-CWNAVIAGYAKKGQFSDAEKVFNLMP---------------VKDLVSYNSMLAGYT 203
D +N +I GY ++GQ A +F+ +P K++VS+NSM+ Y
Sbjct: 233 DLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYL 292
Query: 204 QNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG 263
+ G + A F++M +++ +SWN M+ G+V+ + A LF ++PN +A SW M+ G
Sbjct: 293 KVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSG 352
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSW 319
+A G + AR F+ P K+ VSWN++IAAY ++ EAV LFI+M D +
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 320 TTIINGY-----IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS 374
T++++ +R+G + ++ + D+ AL++ + G + E+ ++F+++
Sbjct: 413 TSLLSASTGLVNLRLGM--QMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 375 -TRDTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAE 429
R+ I WN+MI G+ G EAL+LF M + +++ ++++ A AG +D A+
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 430 NIFQAM 435
F +M
Sbjct: 531 AQFVSM 536
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 206/440 (46%), Gaps = 66/440 (15%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNT---------------IHKNLVTYNSMISVFAKN 80
V+ N I+ G+ G+VE A +F KN+V++NSMI + K
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 81 GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYT 140
G + AR LFD+M R+ +SWNTMI GY+H S +E+A LF MP RD SW +M++ Y
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYA 354
Query: 141 RKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYN 196
G +E AR E P+K T WN++IA Y K + +A +F M ++ D +
Sbjct: 355 SVGNVELARHYFEKTPEK-HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT 413
Query: 197 SMLAGYTQ--NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNA 254
S+L+ T N ++G+ +H ++ K V+ +P NA
Sbjct: 414 SLLSASTGLVNLRLGMQMH---QIVVKTVIP----------------------DVPVHNA 448
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKN-VVSWNAMIAAYAQDLQIDEAVKLFIKMP- 312
+ +TM ++R G+I E+RR+FD M K V++WNAMI YA EA+ LF M
Sbjct: 449 L--ITM---YSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKS 503
Query: 313 ---HKDGVSWTTIINGYIRVGKLDEAR-EVYNQMPCKDIAAETALMSGLIQT----GRVD 364
+ +++ +++N G +DEA+ + + M I + S L+ G+ +
Sbjct: 504 NGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFE 563
Query: 365 EASKMFNQLSTR-DTICWNSMIAG---FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYA 420
EA + + D W +++ + G A + ++ ++S + + + YA
Sbjct: 564 EAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYA 623
Query: 421 QAGQMDSAENIFQAMEERNI 440
G D A + ME + I
Sbjct: 624 DMGLWDEASQVRMNMESKRI 643
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 167/388 (43%), Gaps = 69/388 (17%)
Query: 354 MSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWN 413
++ +I++G + EA +F +L R+T+ WN+MI+G+ + M++A LF MPK++ V+WN
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 414 TMISGYAQAG-------------QMDSAEN---------------------IFQAMEERN 439
TMISGY G +M S ++ +F+ M ERN
Sbjct: 107 TMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF-XXXXXXXXXXXXXQVGNQLH 498
VSW+++ITGF QN + S V++ R+ D S + L
Sbjct: 167 AVSWSAMITGFCQNG----EVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 499 EY-ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE---------------CVDLI 542
+Y L SG + ++ N LI Y + G+VE+A +F I C +++
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
SWNS+I Y G + A F QM D +++ M+ H LF M
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEM 338
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE- 661
A ++ +V +G +E A + K W S++ A +K+ +
Sbjct: 339 PNRD-----AHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-WNSIIAAYEKNKDYKE 392
Query: 662 -IGEFAAMRL--SELEPHNASNYITLSN 686
+ F M + + +PH ++ ++ S
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
K+V + N I K+G V A +F ++ +++N+MI + ++ DA LF +M
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL-- 151
R+ SWN M++GY VE A F+ PE+ SW +I Y + ++A +L
Sbjct: 339 PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFI 398
Query: 152 -LELVPDKLDTACWNAVIA---GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
+ + +K D ++++ G ++ + D+ +N+++ Y++ G+
Sbjct: 399 RMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGE 458
Query: 208 MGLALHFFEKMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLC 262
+ + F++M ++ V++WN M+ G+ G+ S A LF + + P+ +++V++L
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLN 518
Query: 263 GFARHGKITEARRLFDSMPC-----KNVVSWNAMIAAYAQDLQIDEAVKLFIKMP-HKDG 316
A G + EA+ F SM + +++++ + Q +EA+ + MP D
Sbjct: 519 ACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDK 578
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
W G L +A +YN + +AAE
Sbjct: 579 TVW----------GALLDACRIYNNVGLAHVAAE 602
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/690 (34%), Positives = 383/690 (55%), Gaps = 32/690 (4%)
Query: 81 GKISDARQLFDKMSQRN----LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMI 136
G + AR L DK+ QR +V W ++++ Y ++EA LF+VMPER+ + M+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 137 TCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
T Y + ++ +A L +P + W ++ G+ DA ++F+ MP +++VS+N
Sbjct: 116 TGYVKCRRMNEAWTLFREMPK--NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN 173
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS 256
+++ G +NG M A F+ M ++VVSWN M+ G++ + + A+ LF + N V+
Sbjct: 174 TLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVT 233
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-D 315
W +M+ G+ R+G + EA RLF MP +N+VSW AMI+ +A + EA+ LF++M D
Sbjct: 234 WTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVD 293
Query: 316 GVS--WTTIINGYIRVGKLD-EAREVYNQMPCKDIAA--ETALMSGLI---------QTG 361
VS T+I+ G L E R + Q+ + I+ ET G + +G
Sbjct: 294 AVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSG 353
Query: 362 RVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK-KNSVSWNTMISGYA 420
+ A + N+ + D N +I + ++G ++ A LF ++ + VSW +MI GY
Sbjct: 354 LIASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYL 411
Query: 421 QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXX 480
+AG + A +FQ + +++ V+W +I+G +QN L+ +A L M R G KP ST+
Sbjct: 412 EAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSV 471
Query: 481 XXXXXXXXXXXQVGNQLHEYILKSG--YINDLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
G +H I K+ Y DL + N+L++MYAKCG +E A ++F +
Sbjct: 472 LLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ 531
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
D +SWNS+I G + +G A +A FK+ML P+ VTF+G+LSACSH+GL +GL+L
Sbjct: 532 KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH- 657
FK M E ++I+P +HY ++DLLGR G+L+EA + + + ++G+LLG C ++
Sbjct: 592 FKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNW 651
Query: 658 --KNLE-IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
K+ E I E AAMRL EL+P NA ++ L N++A GR + + +R M K K PG
Sbjct: 652 RDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPG 711
Query: 715 CSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
CSW+ V + FLS D + E Q++L
Sbjct: 712 CSWVVVNGRANVFLSGD--KSASEAAQMVL 739
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/637 (26%), Positives = 293/637 (45%), Gaps = 80/637 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G ++EA +F +N+VT N+M++ + K ++++A LF +M +N+VSW M+
Sbjct: 89 KTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTA 147
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAV 167
+ E+A +LFD MPER+ SW ++T R G +EKA+++ + +P + D WNA+
Sbjct: 148 LCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR-DVVSWNAM 206
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN 227
I GY + +A+ +F M K++V++ SM+ GY + G + A F +M E+N+VSW
Sbjct: 207 IKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWT 266
Query: 228 LMVSGFVNSGDLSSARQLFEKI--------PNPNAVSWVTMLCG---------------- 263
M+SGF + A LF ++ PN + + CG
Sbjct: 267 AMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQ 326
Query: 264 ----------------------FARHGKITEARRL----FDSMPCKNVVSWNAMIAAYAQ 297
+A G I A+ L FD C N +I Y +
Sbjct: 327 VISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSC------NIIINRYLK 380
Query: 298 DLQIDEAVKLF--IKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
+ ++ A LF +K H D VSWT++I+GY+ G + A ++ ++ KD T ++S
Sbjct: 381 NGDLERAETLFERVKSLH-DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMIS 439
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP---KKNSVSW 412
GL+Q EA+ + + + NS + S LD + + K + +
Sbjct: 440 GLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACY 499
Query: 413 -------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
N+++S YA+ G ++ A IF M +++ VSWNS+I G + L AL
Sbjct: 500 DPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKE 559
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN---DLFVSNALIAMYAK 522
M GKKP+ TF G +L + + ++ I D ++S +I + +
Sbjct: 560 MLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYIS--MIDLLGR 617
Query: 523 CGRVESAEQVFTAIECV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
G+++ AE+ +A+ D + +L+ LN +A ++ + D V G
Sbjct: 618 AGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPG 677
Query: 582 MLSACS-HAGLANQGLDLFKCMVEDFAIEPLAEHYSC 617
++ C+ +AGL D+ K M ++ I+ + + C
Sbjct: 678 HVALCNVYAGLGRH--DMEKEMRKEMGIKGVKKTPGC 712
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 247/522 (47%), Gaps = 73/522 (13%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISV 76
+K M T+ K+V + + L G+ E+AV +F +N+V++N++++
Sbjct: 119 VKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTG 178
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMI 136
+NG + A+Q+FD M R++VSWN MI GY+ N +EEA LF M E++ +W M+
Sbjct: 179 LIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMV 238
Query: 137 TCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK-DLVSY 195
Y R G + +A L +P++ + W A+I+G+A + +A +F M D VS
Sbjct: 239 YGYCRYGDVREAYRLFCEMPER-NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSP 297
Query: 196 N--SMLAGYTQNGKMGLALHFFEKMAEKNVVS--W------------------------- 226
N ++++ G +G+ + V+S W
Sbjct: 298 NGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIAS 357
Query: 227 --------------NLMVSGFVNSGDLSSARQLFEKIPN-PNAVSWVTMLCGFARHGKIT 271
N++++ ++ +GDL A LFE++ + + VSW +M+ G+ G ++
Sbjct: 358 AQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVS 417
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD----GVSWTTIINGYI 327
A LF + K+ V+W MI+ Q+ EA L M +++ +++
Sbjct: 418 RAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG 477
Query: 328 RVGKLDEAREVY----NQMPC--KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICW 381
LD+ + ++ C D+ + +L+S + G +++A ++F ++ +DT+ W
Sbjct: 478 ATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSW 537
Query: 382 NSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
NSMI G G D+AL+LF++M K NSV++ ++S + +G + +F+AM+E
Sbjct: 538 NSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE 597
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLV-LMGREGKKPDQSTF 478
T +Q + D S++ L+GR GK + F
Sbjct: 598 ----------TYSIQPGI--DHYISMIDLLGRAGKLKEAEEF 627
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/636 (34%), Positives = 347/636 (54%), Gaps = 45/636 (7%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVS 194
+I Y++ G LE R++ + +P + + WN+V+ G K G +A+ +F MP +D +
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQR-NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT 119
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIP 250
+NSM++G+ Q+ + AL +F M ++ V S+ ++S D++ Q+ I
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 251 NPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
+S V ++ +++ G + +A+R+FD M +NVVSWN++I + Q+ EA+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 307 LFIKM----PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGR 362
+F M D V+ ++I+ + + +EV+ GR
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH---------------------GR 278
Query: 363 VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQA 422
V + K+ N D I N+ + + + R+ EA +F MP +N ++ +MISGYA A
Sbjct: 279 VVKNDKLRN-----DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
+A +F M ERN+VSWN+LI G+ QN +AL L+ RE P +F
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYI------NDLFVSNALIAMYAKCGRVESAEQVFTAI 536
+G Q H ++LK G+ +D+FV N+LI MY KCG VE VF +
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
D +SWN++I G+A NGY EA + F++ML PD +T IG+LSAC HAG +G
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
F M DF + PL +HY+C+VDLLGR G LEEA +++ M ++ ++ +WGSLL AC+V
Sbjct: 514 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 573
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
H+N+ +G++ A +L E+EP N+ Y+ LSNM+AE G+WE+V +R MR + K PGCS
Sbjct: 574 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633
Query: 717 WIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
WI++Q F+ D R + I +L+ + A MR
Sbjct: 634 WIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 229/477 (48%), Gaps = 65/477 (13%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H I S +F +N+ I K G +E+ +VF +N+ T+NS+++ K G +
Sbjct: 43 HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFL 102
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCY 139
+A LF M +R+ +WN+M++G+ + EEA F +M + + +S+A +++
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162
Query: 140 TRKGKLEKARELLELV---PDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
+ + K ++ L+ P D +A++ Y+K G +DA++VF+ M +++VS+N
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN 222
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPNP 252
S++ + QNG AL F+ M E V V+ ++S + + +++ ++
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 253 NAVSWVTMLCG-----FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKL 307
+ + +L +A+ +I EAR +FDSMP +NV++ +MI+ YA A +
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342
Query: 308 FIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM-----------------PCKDIA-- 348
F KM ++ VSW +I GY + G+ +EA ++ + C D+A
Sbjct: 343 FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402
Query: 349 --------------------------AETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
+L+ ++ G V+E +F ++ RD + WN
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWN 462
Query: 383 SMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+MI GF Q+G +EAL+LFR+M K + ++ ++S AG ++ + F +M
Sbjct: 463 AMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 31/296 (10%)
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+I + L+ + G +++ ++F+++ R+ WNS++ G + G +DEA LFR MP
Sbjct: 54 EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+++ +WN+M+SG+AQ + + +AL +
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCE-------------------------------EALCYFAM 142
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
M +EG ++ +F G Q+H I KS +++D+++ +AL+ MY+KCG
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
V A++VF + +++SWNSLI+ + NG A+EA F+ ML V PD+VT ++SA
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
C+ G ++ +V++ + + VD+ + R++EA + M ++
Sbjct: 263 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 141/303 (46%), Gaps = 31/303 (10%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K+G+ V ++ + +++ N+ + ++AK +I +AR +FD M RN+++ +MI+G
Sbjct: 270 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 329
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC---- 163
Y + + A +F M ER+ SW +I YT+ G+ E+A L L+ K ++ C
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL--KRESVCPTHY 387
Query: 164 -WNAVIAGYAKKGQFSDAEKV----------FNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ ++ A + + F D+ NS++ Y + G +
Sbjct: 388 SFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHG 268
F KM E++ VSWN M+ GF +G + A +LF ++ P+ ++ + +L G
Sbjct: 448 LVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAG 507
Query: 269 KITEARRLFDSM-------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP-HKDGVSWT 320
+ E R F SM P ++ + M+ + ++EA + +MP D V W
Sbjct: 508 FVEEGRHYFSSMTRDFGVAPLRD--HYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG 565
Query: 321 TII 323
+++
Sbjct: 566 SLL 568
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 39/189 (20%)
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT---------------------- 534
+H ++KSG+ N++F+ N LI Y+KCG +E QVF
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 535 ---------AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
++ D +WNS++SG+A + EA F M E V ++ +F +LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEP-LAEHY--SCLVDLLGRMGRLEEAFNVVRGMDVKA 642
CS N+G+ + + A P L++ Y S LVD+ + G + +A V M +
Sbjct: 162 CSGLNDMNKGVQVHSLI----AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR- 216
Query: 643 NAGLWGSLL 651
N W SL+
Sbjct: 217 NVVSWNSLI 225
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
+KH S +F N I K G VEE VF + ++ V++N+MI FA+NG
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 82 KISDARQLFDKMSQRNLVSWNTMIAGYL----HNSMVEEA-------SKLFDVMPERDNF 130
++A +LF +M + + + G L H VEE ++ F V P RD++
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAG 170
+ M+ R G LE+A+ ++E +P + D+ W +++A
Sbjct: 533 T--CMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/659 (32%), Positives = 357/659 (54%), Gaps = 44/659 (6%)
Query: 136 ITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSY 195
I+ + R G L++A + + ++ W A+I+ YA+ G+ S A +VF+ MPV+ SY
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNR-SIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY 115
Query: 196 NSMLAGYTQNG-KMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP-- 252
N+M+ +N +G A F + EKN VS+ M++GFV +G A L+ + P
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFR 175
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP 312
++V+ +L G+ R GK EA R+F M K VVS ++M+ Y + +I +A LF +M
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 313 HKDGVSWTTIINGYIRVGKLDEA---------------------------------RE-- 337
++ ++WT +I+GY + G ++ RE
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 338 ----VYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG 392
+ ++MP + D+ +LMS + G + EA +F + +D++ WNS+I G Q
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 393 RMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQ 452
++ EA +LF +MP K+ VSW MI G++ G++ +F M E++ ++W ++I+ F+
Sbjct: 356 QISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVS 415
Query: 453 NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFV 512
N Y +AL M ++ P+ TF G Q+H ++K +NDL V
Sbjct: 416 NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSV 475
Query: 513 SNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEV 572
N+L++MY KCG A ++F+ I +++S+N++ISGY+ NG+ +A K F + S
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGK 535
Query: 573 VPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAF 632
P+ VTF+ +LSAC H G + G FK M + IEP +HY+C+VDLLGR G L++A
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDAS 595
Query: 633 NVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAG 692
N++ M K ++G+WGSLL A + H +++ E AA +L ELEP +A+ Y+ LS +++ G
Sbjct: 596 NLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIG 655
Query: 693 RWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHM 751
+ + +R+ + + KR K PG SWI ++ ++ FL+ D +L E I L I M
Sbjct: 656 KNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEM 714
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 172/603 (28%), Positives = 300/603 (49%), Gaps = 58/603 (9%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
+F N QI + G ++EA +F ++++V++ +MIS +A+NGK+S A Q+FD+M
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 96 RNLVSWNTMIAGYLHNSM-VEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL 154
R S+N MI + N + +A +LF +PE++ S+A MIT + R G+ ++A L
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 155 VPDKL-DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
P K D+ N +++GY + G++++A +VF M VK++VS +SM+ GY + G++ A
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-------NPNAVSWVTMLC-GFA 265
F++M E+NV++W M+ G+ +G LF ++ N N ++ + C F
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 266 RH--------------------------------GKITEARRLFDSMPCKNVVSWNAMIA 293
R+ G + EA+ +F M K+ VSWN++I
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
Q QI EA +LF KMP KD VSWT +I G+ G++ + E++ MP KD TA+
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAM 409
Query: 354 MSGLIQTGRVDEA----SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
+S + G +EA KM + ++ ++S+++ + E L + ++ K N
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469
Query: 410 VS----WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
V+ N+++S Y + G + A IF + E NIVS+N++I+G+ N ALK +
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSM 529
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN---DLFVSNALIAMYAK 522
+ GK+P+ TF +G + + + S I D + ++ + +
Sbjct: 530 LESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA--CMVDLLGR 587
Query: 523 CGRVESAEQVFTAIECVDLIS-WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
G ++ A + + + C W SL+S + A A K+++ E+ PD T
Sbjct: 588 SGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLI--ELEPDSATPYV 645
Query: 582 MLS 584
+LS
Sbjct: 646 VLS 648
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 161/350 (46%), Gaps = 34/350 (9%)
Query: 25 KLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKIS 84
K G + K + N I L + ++ EA +F K++V++ MI F+ G+IS
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEIS 389
Query: 85 DARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGK 144
+LF M +++ ++W MI+ ++ N EEA F M +++ + YT
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE-----VCPNSYTFSSV 444
Query: 145 LEKARELLELVPD--------KL----DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL 192
L L +L+ K+ D + N++++ Y K G +DA K+F+ + ++
Sbjct: 445 LSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI 504
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
VSYN+M++GY+ NG AL F + E N V++ ++S V+ G + + F+
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS 564
Query: 249 I-------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQ 300
+ P P+ + + L G R G + +A L +MPCK + W ++++A L+
Sbjct: 565 MKSSYNIEPGPDHYACMVDLLG--RSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLR 622
Query: 301 ID---EAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
+D A K I++ + + Y +GK + + N K I
Sbjct: 623 VDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRI 672
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 178/475 (37%), Positives = 306/475 (64%), Gaps = 4/475 (0%)
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL-QIDEAVKLFIKMPHKDGVSWTTIIN 324
R G I A R+F M KN ++WN+++ ++D ++ EA +LF ++P D S+ +++
Sbjct: 73 RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLS 132
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
Y+R ++A+ +++MP KD A+ +++G + G +++A ++F + ++ + WN+M
Sbjct: 133 CYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAM 192
Query: 385 IAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME-ERNIVSW 443
I+G+ + G +++A F+ P + V+W MI+GY +A +++ AE +F+ M +N+V+W
Sbjct: 193 ISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTW 252
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
N++I+G+++NS D LK M EG +P+ S Q+G Q+H+ + K
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKA 563
S ND+ +LI+MY KCG + A ++F ++ D+++WN++ISGYA +G A +A
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 564 FKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
F++M+ ++ PD +TF+ +L AC+HAGL N G+ F+ MV D+ +EP +HY+C+VDLLG
Sbjct: 373 FREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLG 432
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYIT 683
R G+LEEA ++R M + +A ++G+LLGACRVHKN+E+ EFAA +L +L NA+ Y+
Sbjct: 433 RAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQ 492
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
L+N++A RWE+V R+R M++ K+PG SWIE++N++ F S D R+ PE
Sbjct: 493 LANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSD--RIHPE 545
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 192/381 (50%), Gaps = 50/381 (13%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN-SMVEEASKLFDVMPERDN 129
N +I+ ++G I A ++F M +N ++WN+++ G + S + EA +LFD +PE D
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPD- 123
Query: 130 FSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV 189
T +N +++ Y + F A+ F+ MP
Sbjct: 124 -------------------------------TFSYNIMLSCYVRNVNFEKAQSFFDRMPF 152
Query: 190 KDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI 249
KD S+N+M+ GY + G+M A F M EKN VSWN M+SG++ GDL A F+
Sbjct: 153 KDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVA 212
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPC-KNVVSWNAMIAAYAQDLQIDEAVKLF 308
P V+W M+ G+ + K+ A +F M KN+V+WNAMI+ Y ++ + ++ +KLF
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 309 IKM------PHKDGVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLI 358
M P+ G+S + + G + L R+++ + C D+ A T+L+S
Sbjct: 273 RAMLEEGIRPNSSGLS--SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYC 330
Query: 359 QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM-PKKNSVSWNTMIS 417
+ G + +A K+F + +D + WN+MI+G+ Q G D+AL LFR+M K W T ++
Sbjct: 331 KCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
Query: 418 ---GYAQAGQMDSAENIFQAM 435
AG ++ F++M
Sbjct: 391 VLLACNHAGLVNIGMAYFESM 411
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 207/391 (52%), Gaps = 22/391 (5%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKN-GKISDARQLFDKM 93
+F N+ I + G ++ A+RVF KN +T+NS++ +K+ ++ +A QLFD++
Sbjct: 60 QIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE 153
+ + S+N M++ Y+ N E+A FD MP +D SW MIT Y R+G++EKAREL
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 154 LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
+ +K + + WNA+I+GY + G A F + PV+ +V++ +M+ GY + K+ LA
Sbjct: 180 SMMEKNEVS-WNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 214 FFEKMA-EKNVVSWNLMVSGFVNSGDLSSARQLF----EKIPNPNAVSWVTMLCGFARHG 268
F+ M KN+V+WN M+SG+V + +LF E+ PN+ + L G +
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 269 KITEARRLFD----SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIIN 324
+ R++ S C +V + ++I+ Y + ++ +A KLF M KD V+W +I+
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
GY + G D+A ++ +M I + A++ G V+ F + RD
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM-VRDYKV 417
Query: 381 ------WNSMIAGFCQSGRMDEALDLFRQMP 405
+ M+ ++G+++EAL L R MP
Sbjct: 418 EPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 174/342 (50%), Gaps = 50/342 (14%)
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV-NS 236
SD +++F L N ++A ++G + AL F M KN ++WN ++ G +
Sbjct: 56 SDQDQIFPL---------NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDP 106
Query: 237 GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
+ A QLF++IP P+ S+ ML + R+ +A+ FD MP K+ SWN MI YA
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 297 QDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSG 356
+ ++++A +LF M K+ VSW +I+GYI G L++A + P + + A TA+++G
Sbjct: 167 RRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITG 226
Query: 357 LIQTGRVDEASKMFNQLST-RDTICWNSMIAGFCQSGRMDEALDLFRQM------PKKNS 409
++ +V+ A MF ++ ++ + WN+MI+G+ ++ R ++ L LFR M P +
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 410 VS---------------------------------WNTMISGYAQAGQMDSAENIFQAME 436
+S ++IS Y + G++ A +F+ M+
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 437 ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
++++V+WN++I+G+ Q+ AL M +PD TF
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 210/434 (48%), Gaps = 28/434 (6%)
Query: 33 GKHVFNKNQQIIHLGK-LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFD 91
K+ N +I + K ++ EA ++F + +YN M+S + +N A+ FD
Sbjct: 89 AKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFD 148
Query: 92 KMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL 151
+M ++ SWNTMI GY +E+A +LF M E++ SW MI+ Y G LEKA
Sbjct: 149 RMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHF 208
Query: 152 LELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV-KDLVSYNSMLAGYTQNGKMGL 210
++ P + W A+I GY K + AE +F M V K+LV++N+M++GY +N +
Sbjct: 209 FKVAPVR-GVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPED 267
Query: 211 ALHFFEKMAEKNV-VSWNLMVSGFVNSGDLSS---ARQLFEKIPNPNAVSWVTMLCG--- 263
L F M E+ + + + + S + +LS+ RQ+ + + + VT L
Sbjct: 268 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS 327
Query: 264 -FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM-PHKDGVSWTT 321
+ + G++ +A +LF+ M K+VV+WNAMI+ YAQ D+A+ LF +M +K W T
Sbjct: 328 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 322 II--------NGYIRVG--KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN 371
+ G + +G + Y P D T ++ L + G+++EA K+
Sbjct: 388 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLIR 445
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDE----ALDLFRQMPKKNSVSWNTMISGYAQAGQMDS 427
+ R + G C+ + E A + Q+ +N+ + + + YA + +
Sbjct: 446 SMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWED 505
Query: 428 AENIFQAMEERNIV 441
+ + M+E N+V
Sbjct: 506 VARVRKRMKESNVV 519
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 187/415 (45%), Gaps = 77/415 (18%)
Query: 53 EEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNS 112
E+A F K+ ++N+MI+ +A+ G++ AR+LF M ++N VSWN MI+GY+
Sbjct: 141 EKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECG 200
Query: 113 MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYA 172
+E+AS F V P R +W MIT Y + K+E A + + + + WNA+I+GY
Sbjct: 201 DLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 260
Query: 173 KKGQFSDAEKVFNLM------P---------------------------------VKDLV 193
+ + D K+F M P D+
Sbjct: 261 ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT 320
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF-EKIPN- 251
+ S+++ Y + G++G A FE M +K+VV+WN M+SG+ G+ A LF E I N
Sbjct: 321 ALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNK 380
Query: 252 --PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
P+ +++V +L G + F+SM +D +++
Sbjct: 381 IRPDWITFVAVLLACNHAGLVNIGMAYFESM---------------VRDYKVE------- 418
Query: 310 KMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDE---- 365
P D +T +++ R GKL+EA ++ MP + AA + G + + E
Sbjct: 419 --PQPD--HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEF 474
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYA 420
A++ QL++++ + + + R ++ + ++M + N V + GY+
Sbjct: 475 AAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVK----VPGYS 525
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/642 (33%), Positives = 338/642 (52%), Gaps = 54/642 (8%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK--MAEKN 222
N +I Y K + + A ++F+ + D ++ +M++GY +G + LA FEK + ++
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFD 278
V +N M++GF ++ D SA LF K+ + P+ ++ ++L G A + F
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 279 SMPCKNVVSW-----NAMIAAYAQDLQ----IDEAVKLFIKMPHKDGVSWTTIINGYIRV 329
+ K+ + NA+++ Y++ + A K+F ++ KD SWTT++ GY++
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 330 GKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLST------------- 375
G D E+ M + A A++SG + G EA +M ++ +
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 376 ----------------------RDTICW---NSMIAGFCQSGRMDEALDLFRQMPKKNSV 410
R+ + NS+++ + + G+ DEA +F +MP K+ V
Sbjct: 293 IRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
SWN ++SGY +G + A+ IF+ M+E+NI+SW +I+G +N + LK M REG
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAE 530
+P F G Q H +LK G+ + L NALI MYAKCG VE A
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEAR 472
Query: 531 QVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
QVF + C+D +SWN+LI+ +G+ EA +++ML + + PD++T + +L+ACSHAG
Sbjct: 473 QVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAG 532
Query: 591 LANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSL 650
L +QG F M + I P A+HY+ L+DLL R G+ +A +V+ + K A +W +L
Sbjct: 533 LVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEAL 592
Query: 651 LGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAG 710
L CRVH N+E+G AA +L L P + Y+ LSNMHA G+WEEV R+R LMRD+
Sbjct: 593 LSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVK 652
Query: 711 KLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
K CSWIE++ Q+ FL DD+ E + I L + MR
Sbjct: 653 KEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMR 694
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 195/435 (44%), Gaps = 63/435 (14%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA------------------ 106
++ V YN+MI+ F+ N A LF KM N A
Sbjct: 111 RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQ 170
Query: 107 ----------GYLHN----------------SMVEEASKLFDVMPERDNFSWALMITCYT 140
GY+ + S++ A K+FD + E+D SW M+T Y
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 141 RKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYN 196
+ G + ELLE + D + +NA+I+GY +G + +A ++ M D +Y
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSW---NLMVSGFVNSGDLSSARQLFEKIPNPN 253
S++ G + L + + S+ N +VS + G AR +FEK+P +
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH 313
VSW +L G+ G I EA+ +F M KN++SW MI+ A++ +E +KLF M
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 314 KDGVSWTTIINGYIR----VGKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDE 365
+ +G I+ +G ++ + Q+ ++A AL++ + G V+E
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQ 421
A ++F + D++ WN++IA Q G EA+D++ +M KK + ++ T+++ +
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSH 530
Query: 422 AGQMDSAENIFQAME 436
AG +D F +ME
Sbjct: 531 AGLVDQGRKYFDSME 545
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 169/347 (48%), Gaps = 30/347 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K GK +EA +F K+LV++N+++S + +G I +A+ +F +M ++N++SW MI+G
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 108 YLHNSMVEEASKLFDVM------PERDNFSWALMITCYTRKGKLEKARELLELVPDKLDT 161
N EE KLF M P FS A+ +C + +L+ D+
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK-SCAVLGAYCNGQQYHAQLLKIGFDS 450
Query: 162 --ACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+ NA+I YAK G +A +VF MP D VS+N+++A Q+G A+ +E+M
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEML 510
Query: 220 EKNV----VSWNLMVSGFVNSGDLSSARQLFE------KIPNPNAVSWVTMLCGFARHGK 269
+K + ++ +++ ++G + R+ F+ +IP P A + ++ R GK
Sbjct: 511 KKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP-PGADHYARLIDLLCRSGK 569
Query: 270 ITEARRLFDSMPCKNVVS-WNAMIAAYA----QDLQIDEAVKLFIKMPHKDGVSWTTIIN 324
++A + +S+P K W A+++ +L I A KLF +P DG ++ + N
Sbjct: 570 FSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG-TYMLLSN 628
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETAL----MSGLIQTGRVDEAS 367
+ G+ +E V M + + E A M + T VD+ S
Sbjct: 629 MHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTS 675
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL- 98
N I K G VEEA +VF + V++N++I+ ++G ++A ++++M ++ +
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 99 ---VSWNTMIAGYLHNSMVEEASKLFDVM-------PERDNFSWALMITCYTRKGKLEKA 148
++ T++ H +V++ K FD M P D+++ + + C R GK A
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLC--RSGKFSDA 573
Query: 149 RELLELVPDKLDTACWNAVIAGYAKKGQFS----DAEKVFNLMPVKD 191
++E +P K W A+++G G A+K+F L+P D
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 358 bits (919), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 240/823 (29%), Positives = 393/823 (47%), Gaps = 134/823 (16%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
+ +N +++ ++AK +ISDAR++F+ + N V W + +GY+ + EEA +F+
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 123 VMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFS 178
M + D+ ++ +I Y R GKL+ AR L + D WN +I+G+ K+G +
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP-DVVAWNVMISGHGKRGCET 309
Query: 179 DAEKVFNLMPVKDLVSYNSMLA------GYTQNGKMGLALH------------------- 213
A + F M + S S L G N +GL +H
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 214 --------------FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAV 255
FE + EKN V WN M+ G+ ++G+ +LF + N +
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 256 SWVTML--CG---------------------------------FARHGKITEARRLFDSM 280
++ ++L C +A+ G + +AR++F+ M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 281 PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAR 336
++ V+WN +I +Y QD EA LF +M DG + + V L + +
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 337 EVYN-QMPC---KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG 392
+V+ + C +D+ ++L+ + G + +A K+F+ L + N++IAG+ Q+
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 393 RMDEALDLFRQM-------------------PKKNSVSWNTMISG--------------- 418
++EA+ LF++M K S++ T G
Sbjct: 610 -LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 419 ------YAQAGQMDSAENIFQAMEE-RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK 471
Y + M A +F + ++IV W +++G QN Y +ALK M +G
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQ 531
PDQ+TF + G +H I + D SN LI MYAKCG ++ + Q
Sbjct: 729 LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQ 788
Query: 532 VFTAIEC-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
VF + +++SWNSLI+GYA NGYA +A K F M ++PD++TF+G+L+ACSHAG
Sbjct: 789 VFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848
Query: 591 LANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSL 650
+ G +F+ M+ + IE +H +C+VDLLGR G L+EA + + ++K +A LW SL
Sbjct: 849 KVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSL 908
Query: 651 LGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAG 710
LGACR+H + GE +A +L ELEP N+S Y+ LSN++A G WE+ LR +MRD+
Sbjct: 909 LGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968
Query: 711 KLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
K+PG SWI+V+ + F + D I++ L + M+D
Sbjct: 969 KVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKD 1011
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 153/541 (28%), Positives = 268/541 (49%), Gaps = 36/541 (6%)
Query: 116 EASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKG 175
++ K+FD MP+R + AL R GK ++ L+ + + NA++ YAK
Sbjct: 60 KSRKVFDEMPQR--LALAL------RIGKAVHSKSLILGIDS--EGRLGNAIVDLYAKCA 109
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH----FFEKMAEKNVVSWNLMVS 231
Q S AEK F+ + KD+ ++NSML+ Y+ GK G L FE N ++++++S
Sbjct: 110 QVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLS 168
Query: 232 GFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
++ RQ+ + N+ ++ +A+ +I++ARR+F+ + N V
Sbjct: 169 TCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVC 228
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKM---PHK-DGVSWTTIINGYIRVGKLDEAREVYNQMP 343
W + + Y + +EAV +F +M H+ D +++ T+IN YIR+GKL +AR ++ +M
Sbjct: 229 WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS 288
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQL------STRDTICWNSMIAGFCQSGRMDEA 397
D+ A ++SG + G A + F + STR T+ S+++ +D
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL--GSVLSAIGIVANLDLG 346
Query: 398 LDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN 453
L + + K N ++++S Y++ +M++A +F+A+EE+N V WN++I G+ N
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
++ + M G D TF ++G+Q H I+K +LFV
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 514 NALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
NAL+ MYAKCG +E A Q+F + D ++WN++I Y + EAF FK+M +V
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN 633
D L AC+H QG + C+ ++ S L+D+ + G +++A
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 634 V 634
V
Sbjct: 586 V 586
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 146/612 (23%), Positives = 276/612 (45%), Gaps = 86/612 (14%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--------NLVSWNTMIAG- 107
R++ + + + + ++ + K+ +R++FD+M QR V ++I G
Sbjct: 32 RIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGI 91
Query: 108 -------------YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA-RELLE 153
Y + V A K FD + E+D +W M++ Y+ GK K R +
Sbjct: 92 DSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVS 150
Query: 154 LVPDKL--DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG-----YTQNG 206
L +++ + ++ V++ A++ ++ M +K + NS G Y +
Sbjct: 151 LFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-IKMGLERNSYCGGALVDMYAKCD 209
Query: 207 KMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLC 262
++ A FE + + N V W + SG+V +G A +FE++ + P+ +++VT++
Sbjct: 210 RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWT-- 320
+ R GK+ +AR LF M +VV+WN MI+ + + A++ F M K V T
Sbjct: 270 TYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKSTRS 328
Query: 321 ---TIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQL 373
++++ V LD V+ + +A+ + S L+ + +++ A+K+F L
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPK--------------------------- 406
++ + WN+MI G+ +G + ++LF M
Sbjct: 389 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 448
Query: 407 ------------KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
KN N ++ YA+ G ++ A IF+ M +R+ V+WN++I ++Q+
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
+A M G D + G Q+H +K G DL +
Sbjct: 509 NESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGS 568
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
+LI MY+KCG ++ A +VF+++ ++S N+LI+GY+ N EA F++ML+ V P
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNP 627
Query: 575 DQVTFIGMLSAC 586
++TF ++ AC
Sbjct: 628 SEITFATIVEAC 639
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 209/407 (51%), Gaps = 25/407 (6%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM------PHKDGV 317
+A+ +++ A + FD + K+V +WN+M++ Y+ + + ++ F+ + P+K
Sbjct: 105 YAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNK--F 161
Query: 318 SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQL 373
+++ +++ R ++ R+++ M + + AL+ + R+ +A ++F +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAE 429
+T+CW + +G+ ++G +EA+ +F +M + + +++ T+I+ Y + G++ A
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
+F M ++V+WN +I+G + A++ M + K +ST
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
+G +H +K G ++++V ++L++MY+KC ++E+A +VF A+E + + WN++I
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
GYA NG + + + F M S D TF +LS C+ + G +++ +
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK----K 457
Query: 610 PLAEHY---SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
LA++ + LVD+ + G LE+A + M + N W +++G+
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV-TWNTIIGS 503
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 212/457 (46%), Gaps = 65/457 (14%)
Query: 3 SSYSWDD--------TRGENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEE 54
S Y+ DD T +H ++M S H + I K++F N + K G +E+
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 55 AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMV 114
A ++F ++ VT+N++I + ++ S+A LF +M+ +VS +A S +
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA-----STL 536
Query: 115 EEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKK 174
+ + + + + + C + K L++ D +++I Y+K
Sbjct: 537 KACTHVHGLYQGKQ-------VHCLSVKCGLDR------------DLHTGSSLIDMYSKC 577
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV 234
G DA KVF+ +P +VS N+++AGY+QN E+ VV + M++ V
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNN------------LEEAVVLFQEMLTRGV 625
Query: 235 NSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
N +++ A + E P +++ T HG+IT +R F S +S ++
Sbjct: 626 NPSEITFA-TIVEACHKPESLTLGTQF-----HGQIT--KRGFSSEGEYLGIS---LLGM 674
Query: 295 YAQDLQIDEAVKLFIKMPH-KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
Y + EA LF ++ K V WT +++G+ + G +EA + Y +M + + A
Sbjct: 675 YMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 354 MSGLIQTGRVDEA--------SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+++ V + S +F+ D + N++I + + G M + +F +M
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 406 KK-NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
++ N VSWN++I+GYA+ G + A IF +M + +I+
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM 831
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
++G +H L G ++ + NA++ +YAKC +V AE+ F +E D+ +WNS++S Y
Sbjct: 77 RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMY 135
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
+ G + ++F + ++ P++ TF +LS C+ G + M++ +E
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLERN 194
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE---IGEFAAM 668
+ LVD+ + R+ +A V + V N W L V L + F M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSG-YVKAGLPEEAVLVFERM 252
Query: 669 RLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
R P + + ++T+ N + G+ ++ L
Sbjct: 253 RDEGHRPDHLA-FVTVINTYIRLGKLKDARLL 283
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 231/773 (29%), Positives = 388/773 (50%), Gaps = 72/773 (9%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R+ + + V N +I ++++NG + AR++FD + ++ SW MI+G N E
Sbjct: 212 RILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAE 271
Query: 117 ASKLF------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAV 167
A +LF +MP FS +++ C + LE +L LV DT NA+
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFS-SVLSAC-KKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNV 223
++ Y G AE +F+ M +D V+YN+++ G +Q G A+ F++M E +
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS----WVTMLCGFARHGKITEARRLFDS 279
+ +V G L +QL S +L +A+ I A F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV----SWTTIINGYIRVGKLDEA 335
+NVV WN M+ AY + + ++F +M ++ V ++ +I+ IR+G L+
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 336 REVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
++++Q+ + + S LI + G++D A + + + +D + W +MIAG+ Q
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 392 GRMDEALDLFRQMPKK----------NSVS-----------------------------W 412
D+AL FRQM + N+VS
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
N +++ Y++ G+++ + F+ E + ++WN+L++GF Q+ +AL+ V M REG
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
+ TF + G Q+H I K+GY ++ V NALI+MYAKCG + AE+
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F + + +SWN++I+ Y+ +G+ EA +F QM+ V P+ VT +G+LSACSH GL
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 809
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLG 652
++G+ F+ M ++ + P EHY C+VD+L R G L A ++ M +K +A +W +LL
Sbjct: 810 DKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLS 869
Query: 653 ACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
AC VHKN+EIGEFAA L ELEP +++ Y+ LSN++A + +W+ + R M++K K
Sbjct: 870 ACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKE 929
Query: 713 PGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAIS------AHMRDKFNVFN 759
PG SWIEV+N I F D + I ++ +++D F++ N
Sbjct: 930 PGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLN 982
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 133/573 (23%), Positives = 261/573 (45%), Gaps = 69/573 (12%)
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELL-ELVPDKLDT-ACWN-AVIAGYAKKGQFSD 179
+ P W L+ C G L++ R+L +++ LD+ C + + Y KG
Sbjct: 80 IRPNHQTLKW-LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A KVF+ MP + + ++N M+ +G F +M +NV SG + +
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 240 SS----------ARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN 289
S AR L++ + + V ++ ++R+G + ARR+FD + K+ SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 290 AMIAAYAQDLQIDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQMPC 344
AMI+ +++ EA++LF M + G+ +++++++ ++ L+ +++ +
Sbjct: 258 AMISGLSKNECEAEAIRLFCDM-YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 345 KDIAAET----ALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
+++T AL+S G + A +F+ +S RD + +N++I G Q G ++A++L
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 401 FRQM------PKKNSV----------------------------SWNTMISG-----YAQ 421
F++M P N++ + N I G YA+
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
+++A + F E N+V WN ++ + ++ + M E P+Q T+
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL 541
++G Q+H I+K+ + + +V + LI MYAK G++++A + D+
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLF-K 600
+SW ++I+GY + +A F+QML + D+V +SAC+ +G + +
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 601 CMVEDFAIE-PLAEHYSCLVDLLGRMGRLEEAF 632
V F+ + P + LV L R G++EE++
Sbjct: 617 ACVSGFSSDLPFQ---NALVTLYSRCGKIEESY 646
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 188/417 (45%), Gaps = 51/417 (12%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYI 327
G + A ++FD MP + + +WN MI A I E LF++M ++ +G +
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 328 RVGK-----LDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDT 378
+ D +++ ++ + + T + + LI + G VD A ++F+ L +D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQ------MPKKNSVS--------------------- 411
W +MI+G ++ EA+ LF MP + S
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 412 ------------WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDA 459
N ++S Y G + SAE+IF M +R+ V++N+LI G Q A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
++ M +G +PD +T G QLH Y K G+ ++ + AL+ +
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
YAKC +E+A F E +++ WN ++ Y L +F+ F+QM EE+VP+Q T+
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 580 IGMLSACSHAGLANQGLDLFKCMVE-DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
+L C G G + +++ +F + A S L+D+ ++G+L+ A++++
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLN--AYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 207/494 (41%), Gaps = 92/494 (18%)
Query: 45 HLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
HLG L E +FSN ++ VTYN++I+ ++ G A +LF +M L
Sbjct: 335 HLGNLISAE---HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL------ 385
Query: 105 IAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW 164
E D+ + A ++ + G L + ++ L KL A
Sbjct: 386 ---------------------EPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASN 423
Query: 165 N----AVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE 220
N A++ YAK A F V+++V +N ML Y + + F +M
Sbjct: 424 NKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 483
Query: 221 KNVV----SWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKITE 272
+ +V ++ ++ + GDL Q+ +I NA ++ +A+ GK+
Sbjct: 484 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIR 328
A + K+VVSW MIA Y Q D+A+ F +M + D V T ++
Sbjct: 544 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 603
Query: 329 VGKLDEAREVYNQMPC-----KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNS 383
+ L E ++++ Q C D+ + AL++ + G+++E+ F Q D I WN+
Sbjct: 604 LQALKEGQQIHAQ-ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNA 662
Query: 384 MIAGFCQSGRMDEALDLFRQMPKK----NSVSW--------------------------- 412
+++GF QSG +EAL +F +M ++ N+ ++
Sbjct: 663 LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG 722
Query: 413 --------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
N +IS YA+ G + AE F + +N VSWN++I + ++ +AL S
Sbjct: 723 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFD 782
Query: 465 LMGREGKKPDQSTF 478
M +P+ T
Sbjct: 783 QMIHSNVRPNHVTL 796
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 185/428 (43%), Gaps = 54/428 (12%)
Query: 297 QDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRV-GKLDEAREVYNQMPCKDIAAETALMS 355
Q+ +ID I+ P+ + W ++ G ++ G LDE R++++Q+ + + L
Sbjct: 68 QEKRIDSVENRGIR-PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSE 124
Query: 356 GLIQ----TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN--- 408
L G + A K+F+++ R WN MI + E LF +M +N
Sbjct: 125 KLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP 184
Query: 409 -------------------------------------SVSWNTMISGYAQAGQMDSAENI 431
+V N +I Y++ G +D A +
Sbjct: 185 NEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV 244
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
F + ++ SW ++I+G +N +A++ M G P F
Sbjct: 245 FDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 304
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
++G QLH +LK G+ +D +V NAL+++Y G + SAE +F+ + D +++N+LI+G
Sbjct: 305 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL 364
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE-DFAIEP 610
+ GY +A + FK+M + + PD T ++ ACS G +G L + FA
Sbjct: 365 SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN 424
Query: 611 LAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFAAM 668
E L++L + +E A + +V+ N LW +L A + +L F M
Sbjct: 425 KIE--GALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 669 RLSELEPH 676
++ E+ P+
Sbjct: 482 QIEEIVPN 489
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 148/319 (46%), Gaps = 44/319 (13%)
Query: 39 KNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
+N + + GK+EE+ F T + + +N+++S F ++G +A ++F +M++ +
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
+ +NF++ + + +++ +++ ++
Sbjct: 689 ---------------------------DNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 159 ---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
+T NA+I+ YAK G SDAEK F + K+ VS+N+++ Y+++G AL F
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 216 EKMAEKNVVSWNLMVSGFVNS----GDLSSARQLFEKIP-----NPNAVSWVTMLCGFAR 266
++M NV ++ + G +++ G + FE + +P +V ++ R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 267 HGKITEARRLFDSMPCK-NVVSWNAMIAAYA--QDLQIDE-AVKLFIKMPHKDGVSWTTI 322
G ++ A+ MP K + + W +++A ++++I E A +++ +D ++ +
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 323 INGYIRVGKLDEAREVYNQ 341
N Y K D AR++ Q
Sbjct: 902 SNLYAVSKKWD-ARDLTRQ 919
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N I K G + +A + F KN V++N++I+ ++K+G S+A FD+M N+
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVR 790
Query: 100 SWNTMIAGYL----HNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARE 150
+ + G L H +V++ F+ M S + ++ TR G L +A+E
Sbjct: 791 PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKE 850
Query: 151 LLELVPDKLDTACWNAVIAGYA-----KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQN 205
++ +P K D W +++ + G+F+ A + L P +D +Y + Y +
Sbjct: 851 FIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA-AHHLLELEP-EDSATYVLLSNLYAVS 908
Query: 206 GKMGLALHFFEKMAEKNV 223
K +KM EK V
Sbjct: 909 KKWDARDLTRQKMKEKGV 926
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 349 bits (895), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 340/666 (51%), Gaps = 46/666 (6%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE 126
++ N ++ +++++GK+ AR LFD+M RN SWNTMI GY+++ + + FD+MPE
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNL 186
RD +SW ++++ + + G+L AR L +P+K D N+++ GY G +A ++F
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEK-DVVTLNSLLHGYILNGYAEEALRLFKE 180
Query: 187 MPVK-DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN----SGDLSS 241
+ D ++ ++L + + ++ V + M S VN GDL
Sbjct: 181 LNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRM 240
Query: 242 ARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQI 301
A + E+I P+ S ++ G+A G++ E+R LFD + V+ WN+MI+ Y +
Sbjct: 241 ASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMK 300
Query: 302 DEAVKLFIKM---PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETAL 353
EA+ LF +M +D + +IN I +G L+ ++++ CK DI + L
Sbjct: 301 MEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCH-ACKFGLIDDIVVASTL 359
Query: 354 MSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWN 413
+ + G EA K+F+++ + DTI NSMI + GR+D+A +F ++ K+ +SWN
Sbjct: 360 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Query: 414 TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
+M +G++Q G F M + ++ +
Sbjct: 420 SMTNGFSQNGCTVETLEYFHQMHKLDLPT------------------------------- 448
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
D+ + ++G Q+ G +D VS++LI +Y KCG VE +VF
Sbjct: 449 DEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVF 508
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
+ D + WNS+ISGYA NG EA FK+M + P Q+TF+ +L+AC++ GL
Sbjct: 509 DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVE 568
Query: 594 QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+G LF+ M D P EH+SC+VDLL R G +EEA N+V M + +W S+L
Sbjct: 569 EGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRG 628
Query: 654 CRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
C + +G+ AA ++ ELEP N+ Y+ LS + A +G WE +R LMR+ K P
Sbjct: 629 CVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNP 688
Query: 714 GCSWIE 719
G SW +
Sbjct: 689 GSSWTD 694
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 148/632 (23%), Positives = 282/632 (44%), Gaps = 96/632 (15%)
Query: 14 NHKIKMTSMKHKLTIG-----SIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLV 68
NH ++M S K+ I + ++ F+ N I G+ ++R F ++
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGY 125
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM---- 124
++N ++S FAK G++S AR+LF+ M ++++V+ N+++ GY+ N EEA +LF +
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA 185
Query: 125 --------------------------------PERDNFSWALMITCYTRKGKLEKARELL 152
E D+ + ++ Y + G L A +L
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 153 ELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
E + + D + +A+I+GYA G+ +++ +F+ + ++ +NSM++GY N AL
Sbjct: 246 EQIREPDDHS-LSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEAL 304
Query: 213 HFFEKM---AEKNVVSWNLMVSGFVNSGDLSSARQL------FEKIPNPNAVSWVTMLCG 263
F +M ++ + +++ + G L + +Q+ F I + S T+L
Sbjct: 305 VLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAS--TLLDM 362
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTII 323
+++ G EA +LF + + + N+MI Y +ID+A ++F ++ +K +SW ++
Sbjct: 363 YSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMT 422
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR------- 376
NG+ + G E E ++QM D+ + +S +I + ++ Q+ R
Sbjct: 423 NGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLD 482
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
D + +S+I +C+ G ++ +F M K + V WN+MISGYA GQ A ++F+
Sbjct: 483 SDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK- 541
Query: 436 EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGN 495
M G +P Q TF + G
Sbjct: 542 ------------------------------MSVAGIRPTQITFMVVLTACNYCGLVEEGR 571
Query: 496 QLHEYI-LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYAL 553
+L E + + G++ D + ++ + A+ G VE A + + VD W+S++ G
Sbjct: 572 KLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVA 631
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
NGY KA ++++ E+ P+ LSA
Sbjct: 632 NGYKAMGKKAAEKII--ELEPENSVAYVQLSA 661
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 294/544 (54%), Gaps = 40/544 (7%)
Query: 228 LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
+++ + S + AR++F ++P+P+ + M+ G+ R ++ +A LFD MP ++VVS
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
WN+MI+ + ++ AVKLF +MP + VSWT ++NG R GK+D+A ++ QMP KD
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT 159
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK- 406
AA +++ G +Q G+VD+A K+F Q+ ++ I W +MI G Q+ R EALDLF+ M +
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 407 ----------------KNSVSWN----------------------TMISGYAQAGQMDSA 428
N+ +++ ++I+ YA ++ +
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 429 ENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX 488
+F + W +L++G+ N + DAL M R P+QSTF
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
G ++H +K G D FV N+L+ MY+ G V A VF I ++SWNS+I
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF-A 607
G A +G AF F QM+ PD++TF G+LSACSH G +G LF M
Sbjct: 400 VGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH 459
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAA 667
I+ +HY+C+VD+LGR G+L+EA ++ M VK N +W +LL ACR+H +++ GE AA
Sbjct: 460 IDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAA 519
Query: 668 MRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCF 727
+ L+ +++ Y+ LSN++A AGRW V +LRV M+ K PG SW+ ++ + F
Sbjct: 520 AAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEF 579
Query: 728 LSDD 731
S D
Sbjct: 580 FSGD 583
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 213/413 (51%), Gaps = 37/413 (8%)
Query: 51 KVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLH 110
+++EA VF+ ++ Y MI+ + ++ ++ DA LFD+M R++VSWN+MI+G +
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 111 NSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAG 170
+ A KLFD MPER SW M+ R GK+++A L +P K DTA WN+++ G
Sbjct: 110 CGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DTAAWNSMVHG 168
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS----W 226
Y + G+ DA K+F MP K+++S+ +M+ G QN + G AL F+ M + S +
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 227 NLMVSGFVNSGDLSSARQ----------LFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
+++ N+ Q L+E+ + + +++ +A +I ++R++
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITF------YANCKRIGDSRKV 282
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM------PHKDGVSWTTIINGYIRVG 330
FD + V W A+++ Y+ + + ++A+ +F M P++ ++ + +N +G
Sbjct: 283 FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQS--TFASGLNSCSALG 340
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIA 386
LD +E++ + + + + L+ +G V++A +F ++ + + WNS+I
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400
Query: 387 GFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAM 435
G Q GR A +F QM + N +++ ++S + G ++ +F M
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 228/454 (50%), Gaps = 31/454 (6%)
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTA 162
+I +L + ++EA ++F+ +P + MIT YTR +L A L + +P + D
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR-DVV 98
Query: 163 CWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
WN++I+G + G + A K+F+ MP + +VS+ +M+ G ++GK+ A F +M K+
Sbjct: 99 SWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKD 158
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-- 280
+WN MV G++ G + A +LF+++P N +SW TM+CG ++ + EA LF +M
Sbjct: 159 TAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLR 218
Query: 281 --------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP--HKDGVSWTTIINGYIRVG 330
P V++ A A+ +Q+ L IK+ +++ VS ++I Y
Sbjct: 219 CCIKSTSRPFTCVITACANAPAFHMGIQVH---GLIIKLGFLYEEYVS-ASLITFYANCK 274
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQ 390
++ ++R+V+++ + +A TAL+SG + ++A +F+ + + S A
Sbjct: 275 RIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Query: 391 SGRMDEALDLFRQMP--------KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
S LD ++M + ++ N+++ Y+ +G ++ A ++F + +++IVS
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS 394
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
WNS+I G Q+ A M R K+PD+ TF + G +L Y+
Sbjct: 395 WNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM- 453
Query: 503 KSGYINDLFVS----NALIAMYAKCGRVESAEQV 532
S IN + ++ + +CG+++ AE++
Sbjct: 454 -SSGINHIDRKIQHYTCMVDILGRCGKLKEAEEL 486
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
F N ++ G V +AV VF K++V++NS+I A++G+ A +F +M +
Sbjct: 362 FVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Query: 97 NL----VSWNTMIAGYLHNSMVEEASKLFDVMP------ERDNFSWALMITCYTRKGKLE 146
N +++ +++ H +E+ KLF M +R + M+ R GKL+
Sbjct: 422 NKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLK 481
Query: 147 KARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEK----VFNLMPVKDLVSYNSMLAGY 202
+A EL+E + K + W A+++ EK +FNL K +Y + Y
Sbjct: 482 EAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNL-DSKSSAAYVLLSNIY 540
Query: 203 TQNGKMGLALHFFEKMAEKNVV-----SWNLMVSGFVN---SGDLSSARQLFEKI 249
G+ KM + ++ SW +++ G + SGD +++EK+
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKKPGSSW-VVIRGKKHEFFSGDQPHCSRIYEKL 594
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 200/632 (31%), Positives = 340/632 (53%), Gaps = 25/632 (3%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTA-CWNAVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
++ Y++ G AR+L + +P L TA WN V++ Y+K+G + F+ +P +D V
Sbjct: 55 LMNVYSKTGYALHARKLFDEMP--LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-- 251
S+ +M+ GY G+ A+ M ++ + ++ + S + + +K+ +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 252 ------PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAV 305
N ++L +A+ G A+ +FD M +++ SWNAMIA + Q Q+D A+
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAM 232
Query: 306 KLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMP-----CKDIAAETALMSGLIQT 360
F +M +D V+W ++I+G+ + G A +++++M D +++S
Sbjct: 233 AQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL 292
Query: 361 GRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSV--SWNT 414
++ ++ + + T I N++I+ + + G ++ A L Q K+ +
Sbjct: 293 EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
++ GY + G M+ A+NIF ++++R++V+W ++I G+ Q+ Y +A+ M G++P+
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
T G Q+H +KSG I + VSNALI MYAK G + SA + F
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 535 AIEC-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
I C D +SW S+I A +G+A EA + F+ ML E + PD +T++G+ SAC+HAGL N
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 594 QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
QG F M + I P HY+C+VDL GR G L+EA + M ++ + WGSLL A
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Query: 654 CRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
CRVHKN+++G+ AA RL LEP N+ Y L+N+++ G+WEE ++R M+D R K
Sbjct: 593 CRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652
Query: 714 GCSWIEVQNQIQCFLSDDSGRLRPETIQIILN 745
G SWIEV++++ F +D PE +I +
Sbjct: 653 GFSWIEVKHKVHVFGVEDG--THPEKNEIYMT 682
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 165/651 (25%), Positives = 298/651 (45%), Gaps = 115/651 (17%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
RV + + ++ N++++V++K G AR+LFD+M R SWNT+++ Y ++
Sbjct: 39 RVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDS 98
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKA-RELLELVPDKLD--------------- 160
+ FD +P+RD+ SW MI Y G+ KA R + ++V + ++
Sbjct: 99 TCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAA 158
Query: 161 TACW----------------------NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
T C N+++ YAK G A+ VF+ M V+D+ S+N+M
Sbjct: 159 TRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAM 218
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG-DLSS----ARQLFEKIPNPN 253
+A + Q G+M LA+ FE+MAE+++V+WN M+SGF G DL + ++ L + + +P+
Sbjct: 219 IALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD 278
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFI 309
+ ++L A K+ +++ + + NA+I+ Y++ ++ A +L
Sbjct: 279 RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
Query: 310 KMPHKDGV--SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEAS 367
+ KD +T +++GYI++G +++A+ ++ + +D+ A TA++ G Q G EA
Sbjct: 339 QRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAI 398
Query: 368 KMFNQL----STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN-----SVSWNTMISG 418
+F + ++ +M++ + + K SVS N +I+
Sbjct: 399 NLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS-NALITM 457
Query: 419 YAQAGQMDSAENIFQAME-ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
YA+AG + SA F + ER+ VSW S+I Q+ +AL+ M EG +PD T
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC---GRVESAEQVFT 534
+ + +++ C G V Q F
Sbjct: 518 Y--------------------------------------VGVFSACTHAGLVNQGRQYFD 539
Query: 535 AIECVDLI-----SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHA 589
++ VD I + ++ + G EA + ++M E PD VT+ +LSAC
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE---PDVVTWGSLLSACR-- 594
Query: 590 GLANQGLDLFKCMVED-FAIEPL-AEHYSCLVDLLGRMGRLEEAFNVVRGM 638
++ +DL K E +EP + YS L +L G+ EEA + + M
Sbjct: 595 --VHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 227/777 (29%), Positives = 376/777 (48%), Gaps = 104/777 (13%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R+++N + + + +S + ++ +A LFDK R+ S+ +++ G+ + +E
Sbjct: 21 RIYANGVAQVRIYCFGTVS----SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQE 76
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL-ELVPDKLDTAC-----------W 164
A +LF + + + C L+ + L EL +L C
Sbjct: 77 AKRLF-----LNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVG 131
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------ 218
+++ Y K F D KVF+ M +++V++ ++++GY +N L F +M
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 219 -------------AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFA 265
AE+ V L V V L + IP N++ + + CG
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD------KTIPVSNSLINLYLKCGNV 245
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTT 321
R +AR LFD K+VV+WN+MI+ YA + EA+ +F M S+ +
Sbjct: 246 R-----KARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 322 IINGYIRVGKLDEAREVYNQMPCK--------DIAAETALMSGLIQTGRVDEASKMFNQL 373
+I L E R Q+ C D TALM + + +A ++F ++
Sbjct: 301 VIK---LCANLKELR-FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 374 S-TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK------------------------- 407
+ + W +MI+GF Q+ +EA+DLF +M +K
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVH 416
Query: 408 ----------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
+S ++ Y + G+++ A +F +++++IV+W++++ G+ Q
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ-VGNQLHEYILKSGYINDLFVSNAL 516
A+K + + G KP++ TF G Q H + +KS + L VS+AL
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
+ MYAK G +ESAE+VF DL+SWNS+ISGYA +G A++A FK+M +V D
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
VTFIG+ +AC+HAGL +G F MV D I P EH SC+VDL R G+LE+A V+
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 637 GMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
M A + +W ++L ACRVHK E+G AA ++ ++P +++ Y+ LSNM+AE+G W+E
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 697 VERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
++R LM ++ K PG SWIEV+N+ FL+ D + I + L +S ++D
Sbjct: 717 RAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKD 773
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 194/409 (47%), Gaps = 48/409 (11%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G V +A +F T K++VT+NSMIS +A NG +A +F M + N V
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM-RLNYVR------- 292
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRK-GKLEKARELLELVPDKLDTACWNA 166
L S KL + E + + C K G L D A
Sbjct: 293 -LSESSFASVIKLCANLKE---LRFTEQLHCSVVKYGFL-------------FDQNIRTA 335
Query: 167 VIAGYAKKGQFSDAEKVFN-LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS 225
++ Y+K DA ++F + V ++VS+ +M++G+ QN A+ F +M K V
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 226 WNLMVSGFVNSGDLSSARQLFEKIPNPN----AVSWVTMLCGFARHGKITEARRLFDSMP 281
S + + + S ++ ++ N + +L + + GK+ EA ++F +
Sbjct: 396 NEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV-----SWTTII------NGYIRVG 330
K++V+W+AM+A YAQ + + A+K+F ++ K G+ ++++I+ N + G
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELT-KGGIKPNEFTFSSILNVCAATNASMGQG 514
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQ 390
K + +++ + +AL++ + G ++ A ++F + +D + WNSMI+G+ Q
Sbjct: 515 KQFHGFAIKSRLD-SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 391 SGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM 435
G+ +ALD+F++M K+ + V++ + + AG ++ E F M
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 141/305 (46%), Gaps = 30/305 (9%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KLGKVEEA +VFS K++V +++M++ +A+ G+ A ++F ++++ + +
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499
Query: 108 YLHNSMVEEAS----KLFDVMPERDNFSWAL-----MITCYTRKGKLEKARELLELVPDK 158
L+ AS K F + +L ++T Y +KG +E A E+ + +K
Sbjct: 500 ILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHF 214
D WN++I+GYA+ GQ A VF M + D V++ + A T G + +
Sbjct: 560 -DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 215 FEKMAEKNVVSW-----NLMVSGFVNSGDLSSARQLFEKIPNP-NAVSWVTMLCGFARHG 268
F+ M ++ + MV + +G L A ++ E +PNP + W T+L H
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK 678
Query: 269 KITEARRL----FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD-----GVSW 319
K TE RL +M ++ ++ + YA+ E K+ M ++ G SW
Sbjct: 679 K-TELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSW 737
Query: 320 TTIIN 324
+ N
Sbjct: 738 IEVKN 742
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/644 (30%), Positives = 340/644 (52%), Gaps = 50/644 (7%)
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQ 176
A+KLFD MP+RD+ +W ++ R G EKA EL ++ Q
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELF--------------------REMQ 81
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM-GLALHFFEKMAEKNVVSWNLMVSGFVN 235
FS A K ++ VK L+ S G+ + ++ G L E NV N ++ +
Sbjct: 82 FSGA-KAYDSTMVK-LLQVCSNKEGFAEGRQIHGYVLRLG---LESNVSMCNSLIVMYSR 136
Query: 236 SGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAM 291
+G L +R++F + + N SW ++L + + G + +A L D M ++V+WN++
Sbjct: 137 NGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSL 196
Query: 292 IAAYAQDLQIDEAVKLFIKM------PHKDGVS---WTTIINGYIRVGKLDEAREVYNQM 342
++ YA +A+ + +M P +S G++++GK + NQ+
Sbjct: 197 LSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL 256
Query: 343 PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFR 402
D+ ET L+ I+TG + A +F+ + ++ + WNS+++G + + +A L
Sbjct: 257 -WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMI 315
Query: 403 QMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNS 454
+M K+ ++++WN++ SGYA G+ + A ++ M+E+ N+VSW ++ +G +N
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
+ +ALK + M EG P+ +T G ++H + L+ I D +V+
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT 435
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
AL+ MY K G ++SA ++F I+ L SWN ++ GYA+ G E AF ML + P
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
D +TF +LS C ++GL +G F M + I P EH SC+VDLLGR G L+EA++
Sbjct: 496 DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF 555
Query: 635 VRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
++ M +K +A +WG+ L +C++H++LE+ E A RL LEPHN++NY+ + N+++ RW
Sbjct: 556 IQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRW 615
Query: 695 EEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
E+VER+R LMR+ R SWI++ + F ++ G+ P+
Sbjct: 616 EDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAE--GKTHPD 657
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 188/405 (46%), Gaps = 23/405 (5%)
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTI 322
G HG + +R D+ + V +A + Y + + + A KLF +MP +D ++W I
Sbjct: 6 GLTIHGGLI--KRGLDNSDTRVV---SASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEI 60
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT---------GRVDEASKMFNQL 373
+ +R G ++A E++ +M A + M L+Q GR + L
Sbjct: 61 VMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGL 120
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ 433
+ ++C NS+I + ++G+++ + +F M +N SWN+++S Y + G +D A +
Sbjct: 121 ESNVSMC-NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 434 AME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
ME + +IV+WNSL++G+ L DA+ L M G KP S+
Sbjct: 180 EMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
++G +H YIL++ D++V LI MY K G + A VF ++ ++++WNSL+S
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
G + +A +M E + PD +T+ + S + G + LD+ M E +
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVA 358
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLWGSLL 651
P ++ + + G A V M V NA +LL
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 224/500 (44%), Gaps = 80/500 (16%)
Query: 57 RVFSNTIHKNLV----------TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
R TIH L+ ++ + + + + A +LFD+M +R+ ++WN ++
Sbjct: 3 RFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVM 62
Query: 107 GYLHNSMVEEASKLFDVM-----PERDNFSWALMITCYTRKGKLEKAR---ELLELVPDK 158
L + E+A +LF M D+ L+ C ++G E + +L L +
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+ C N++I Y++ G+ + KVFN M ++L S+NS+L+ YT+ G + A+ ++M
Sbjct: 123 NVSMC-NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 219 A----EKNVVSWNLMVSGFVNSG-------------------DLSSARQLFEKIPNPNAV 255
+ ++V+WN ++SG+ + G SS L + + P +
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 256 S--------------W------VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
W T++ + + G + AR +FD M KN+V+WN++++
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 296 AQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE- 350
+ + +A L I+M + D ++W ++ +GY +GK ++A +V +M K +A
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 351 ---TALMSGLIQTGRVDEASKMFNQL---------STRDTICWNSMIAGFCQSGRMDEAL 398
TA+ SG + G A K+F ++ +T T+ SG+
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 399 DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFD 458
L + + V+ ++ Y ++G + SA IF ++ +++ SWN ++ G+ +
Sbjct: 422 CLRKNLICDAYVA-TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEE 480
Query: 459 ALKSLVLMGREGKKPDQSTF 478
+ + +M G +PD TF
Sbjct: 481 GIAAFSVMLEAGMEPDAITF 500
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 202/434 (46%), Gaps = 62/434 (14%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
+ N+ NS+I ++++NGK+ +R++F+ M RNL SWN++++ Y V++A L D
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEK 182
M E+ L P D WN++++GYA KG DA
Sbjct: 180 EM-------------------------EICGLKP---DIVTWNSLLSGYASKGLSKDAIA 211
Query: 183 VFNLMPVKDL----VSYNSMLAGYTQNG--KMGLALH--FFEKMAEKNVVSWNLMVSGFV 234
V M + L S +S+L + G K+G A+H +V ++ ++
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 235 NSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNA 290
+G L AR +F+ + N V+W +++ G + + +A L M + + ++WN+
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 291 MIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKD 346
+ + YA + ++A+ + KM K + VSWT I +G + G A +V+ +M +
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 347 IAAETALMSGLIQT----GRVDEASKMFNQLSTRDTIC----WNSMIAGFCQSGRMDEAL 398
+ A MS L++ + ++ ++ IC +++ + +SG + A+
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI 451
Query: 399 DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLI-----TG 449
++F + K+ SWN M+ GYA G+ + F M E + +++ S++ +G
Sbjct: 452 EIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSG 511
Query: 450 FLQNSL-YFDALKS 462
+Q YFD ++S
Sbjct: 512 LVQEGWKYFDLMRS 525
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 215/484 (44%), Gaps = 81/484 (16%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----Q 95
N I+ + GK+E + +VF++ +NL ++NS++S + K G + DA L D+M +
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 96 RNLVSWNTMIAGYLHNSMVEEA-------------------SKLFDVMPE---------- 126
++V+WN++++GY + ++A S L + E
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 127 ----------RDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQ 176
D + +I Y + G L AR + +++ D + WN++++G +
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM-DAKNIVAWNSLVSGLSYACL 306
Query: 177 FSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNL 228
DAE + M + D +++NS+ +GY GK AL KM EK NVVSW
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 229 MVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTML----CGFARH-GKITEARRLFDS 279
+ SG +G+ +A ++F K+ PNA + T+L C H GK L +
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVY 339
+ C V+ A++ Y + + A+++F + +K SW ++ GY G+ +E +
Sbjct: 427 LICDAYVA-TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 340 NQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI------CWNSMIAG 387
+ M P D T+++S +G V E K F+ + +R I C + M+
Sbjct: 486 SVMLEAGMEP--DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC-SCMVDL 542
Query: 388 FCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAE---NIFQAMEERNIVSW 443
+SG +DEA D + M K ++ W +S ++ AE Q +E N ++
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANY 602
Query: 444 NSLI 447
+I
Sbjct: 603 MMMI 606
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 206/477 (43%), Gaps = 79/477 (16%)
Query: 45 HLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
HL KLGK + N + ++ ++I ++ K G + AR +FD M +N+V+WN++
Sbjct: 240 HL-KLGKAIHGY-ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 297
Query: 105 IAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK-- 158
++G + ++++A L M + D +W + + Y GK EKA +++ + +K
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
Query: 159 -LDTACWNAVIAGYAKKGQFSDAEKVFNLM------PVKDLVSYNSMLAGYTQNGKMGLA 211
+ W A+ +G +K G F +A KVF M P +S + G G
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Query: 212 LHFFEKMAEKNVVSWNLMVSGFVN----SGDLSSARQLFEKIPNPNAVSWVTMLCGFARH 267
+H F KN++ + + V+ SGDL SA ++F I N + SW ML G+A
Sbjct: 418 VHGF--CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMF 475
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTII---- 323
G+ E IAA++ L+ D +++T+++
Sbjct: 476 GRGEEG------------------IAAFSVMLEAGM---------EPDAITFTSVLSVCK 508
Query: 324 -NGYIRVG--KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTI 379
+G ++ G D R Y +P I + ++ L ++G +DEA +S + D
Sbjct: 509 NSGLVQEGWKYFDLMRSRYGIIPT--IEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDAT 566
Query: 380 CWNSMIAGFCQSGRMDEALDL----FRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
W + ++ C+ R E ++ + + NS ++ MI+ Y+ + + E I M
Sbjct: 567 IWGAFLSS-CKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLM 625
Query: 436 EE-----RNIVSW---NSLITGFL--------QNSLYFDALKSLVLMGREGKKPDQS 476
+++ SW + + F + +YF+ K + M + G PD S
Sbjct: 626 RNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTS 682
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 333 bits (854), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 210/764 (27%), Positives = 382/764 (50%), Gaps = 79/764 (10%)
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--NLVSWNTMIAGYLHNSMVEEAS 118
N+I + T ++ ++A G SD ++F ++ R ++ WN++I+ ++ N ++ +A
Sbjct: 64 NSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQAL 123
Query: 119 KL------FDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC----WNAVI 168
F V P+ F L+ C K K + L L C +++I
Sbjct: 124 AFYFKMLCFGVSPDVSTFP-CLVKACVALKNF--KGIDFLSDTVSSLGMDCNEFVASSLI 180
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVV 224
Y + G+ K+F+ + KD V +N ML GY + G + + F M N V
Sbjct: 181 KAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAV 240
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV--------TMLCGFARHGKITEARRL 276
+++ ++S + + QL + VS V ++L +++ G+ +A +L
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLV----VVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKL 332
F M + V+WN MI+ Y Q ++E++ F +M D +++++++ + L
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
Query: 333 DEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
+ ++++ + I+ + L S LI + V A +F+Q ++ D + + +MI+G+
Sbjct: 357 EYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGY 416
Query: 389 CQSGRMDEALDLFRQMPK----KNSVSWNTM----------------------------- 415
+G ++L++FR + K N ++ ++
Sbjct: 417 LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRC 476
Query: 416 ------ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
I YA+ G+M+ A IF+ + +R+IVSWNS+IT Q+ A+ MG
Sbjct: 477 NIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 536
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
G D + G +H +++K +D++ + LI MYAKCG +++A
Sbjct: 537 GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Query: 530 EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSH 588
VF ++ +++SWNS+I+ +G ++ F +M+ + + PDQ+TF+ ++S+C H
Sbjct: 597 MNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCH 656
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
G ++G+ F+ M ED+ I+P EHY+C+VDL GR GRL EA+ V+ M +AG+WG
Sbjct: 657 VGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWG 716
Query: 649 SLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKR 708
+LLGACR+HKN+E+ E A+ +L +L+P N+ Y+ +SN HA A WE V ++R LM+++
Sbjct: 717 TLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKERE 776
Query: 709 AGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
K+PG SWIE+ + F+S D I +LN++ +R
Sbjct: 777 VQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/487 (19%), Positives = 207/487 (42%), Gaps = 100/487 (20%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMI 105
GK++ ++F + K+ V +N M++ +AK G + + F M N V+++ ++
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 106 AGYLHNSMVEEASKLFD-VMPERDNFSWAL---MITCYTRKGKLEKARELLELVPDKLDT 161
+ +++ +L V+ +F ++ +++ Y++ G+ + A +L ++ + DT
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM-SRADT 305
Query: 162 ACWNAVIAGYAKKGQFSDAEKVFNLM----PVKDLVSYNSMLA----------------- 200
WN +I+GY + G ++ F M + D ++++S+L
Sbjct: 306 VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCY 365
Query: 201 ------------------GYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG----D 238
Y + + +A + F + +VV + M+SG++++G
Sbjct: 366 IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 239 LSSARQLFEKIPNPNAVSWVTML-------------------------------CG---- 263
L R L + +PN ++ V++L C
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSW 319
+A+ G++ A +F+ + +++VSWN+MI AQ A+ +F +M D VS
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 320 TTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLST 375
+ ++ + + ++ M D+ +E+ L+ + G + A +F +
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQMPKK-----NSVSWNTMISGYAQAGQMDSAEN 430
++ + WNS+IA G++ ++L LF +M +K + +++ +IS G +D
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 431 IFQAMEE 437
F++M E
Sbjct: 666 FFRSMTE 672
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 147/342 (42%), Gaps = 56/342 (16%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ ++I ++ +++I + K +S A+ +F + + ++V + MI+GYLHN + ++
Sbjct: 366 IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 118 SKLF----DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK-LDTAC--WNAVIAG 170
++F V + + ++ L+ REL + K D C AVI
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----------- 219
YAK G+ + A ++F + +D+VS+NSM+ Q+ A+ F +M
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 220 ----------------------------EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
+V S + ++ + G+L +A +F+ +
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVK 306
N VSW +++ HGK+ ++ LF M K + +++ +I++ +DE V+
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 307 LFIKMPHKDGVS-----WTTIINGYIRVGKLDEAREVYNQMP 343
F M G+ + +++ + R G+L EA E MP
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H I V++++ I K G ++ A+ VF KN+V++NS+I+ +GK+
Sbjct: 565 HGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKL 624
Query: 84 SDARQLFDKMSQR-----NLVSWNTMIAGYLHNSMVEEASKLFDVM-------PERDNFS 131
D+ LF +M ++ + +++ +I+ H V+E + F M P++++
Sbjct: 625 KDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH-- 682
Query: 132 WALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAG 170
+A ++ + R G+L +A E ++ +P D W ++
Sbjct: 683 YACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC--VDLISWNSLISGY 551
G Q+H +++ + D + ++ MYA CG ++F ++ + WNS+IS +
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN-QGLDLFKCMVEDFAIEP 610
NG +A + +ML V PD TF ++ AC L N +G+D V ++
Sbjct: 114 VRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC--VALKNFKGIDFLSDTVSSLGMDC 171
Query: 611 LAEHYSCLVDLLGRMGRLE---EAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEF 665
S L+ G+++ + F+ V ++ + +W +L L+ I F
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRV----LQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 666 AAMRLSELEPHNASNYITLS 685
+ MR+ ++ P+ + LS
Sbjct: 228 SVMRMDQISPNAVTFDCVLS 247
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 333 bits (853), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 233/825 (28%), Positives = 392/825 (47%), Gaps = 117/825 (14%)
Query: 41 QQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS 100
Q + LGK + F T N ++ V+ + A +FDKM R++VS
Sbjct: 61 QGALELGKQAHAHMIISGFRPTT----FVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVS 116
Query: 101 WNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGK--------LEKARELL 152
WN MI GY ++ + +A+ F++MP RD SW M++ Y + G+ ++ RE +
Sbjct: 117 WNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 176
Query: 153 EL------------------------------VPDKLDTACWNAVIAGYAKKGQFSDAEK 182
E V D +A++ YAK +F ++ +
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV-VSWNLMVSGFVNSGDLSS 241
VF +P K+ VS+++++AG QN + LAL FF++M + N VS ++ S + LS
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 242 AR---QLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
R QL + + L +A+ + +A+ LFD+ N S+NAMI
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 295 YAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
Y+Q+ +A+ LF ++ D +S + + V L E ++Y ++ +
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 416
Query: 351 TALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
+ + I + + EA ++F+++ RD + WN++IA Q+G+ E L LF M +
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 476
Query: 407 K--------------------------------------NSVSWNTMISGYAQAGQMDSA 428
NS ++I Y++ G ++ A
Sbjct: 477 SRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 429 ENI----FQ------AMEERN----------IVSWNSLITGFLQNSLYFDALKSLVLMGR 468
E I FQ MEE VSWNS+I+G++ DA M
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
G PD+ T+ +G Q+H ++K +D+++ + L+ MY+KCG +
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHD 656
Query: 529 AEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
+ +F D ++WN++I GYA +G EA + F++M+ E + P+ VTFI +L AC+H
Sbjct: 657 SRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAH 716
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
GL ++GL+ F M D+ ++P HYS +VD+LG+ G+++ A ++R M +A+ +W
Sbjct: 717 MGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWR 776
Query: 649 SLLGACRVHK-NLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
+LLG C +H+ N+E+ E A L L+P ++S Y LSN++A+AG WE+V LR MR
Sbjct: 777 TLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGF 836
Query: 708 RAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
+ K PGCSW+E+++++ FL D R E I L I + M+
Sbjct: 837 KLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 169/728 (23%), Positives = 315/728 (43%), Gaps = 123/728 (16%)
Query: 96 RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS---WALMITCYTRKGKLE---KAR 149
R++VS+N + + V S D + + ++ S ++ + ++G LE +A
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAH 71
Query: 150 ELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG 209
+ + + T N ++ Y F A VF+ MP++D+VS+N M+ GY+++ M
Sbjct: 72 AHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMF 131
Query: 210 LALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF-----EKIP-------------- 250
A FF M ++VVSWN M+SG++ +G+ + ++F E I
Sbjct: 132 KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCS 191
Query: 251 --------------------NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA 290
+ + V+ +L +A+ + E+ R+F +P KN VSW+A
Sbjct: 192 FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSA 251
Query: 291 MIAAYAQDLQIDEAVKLFIKMPHKD-GVS---WTTIINGYIRVGKLDEAREVYNQMPCKD 346
+IA Q+ + A+K F +M + GVS + +++ + +L +++ D
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 347 IAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFR 402
AA+ TA + + + +A +F+ + +N+MI G+ Q +AL LF
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 403 QMPK----------------------------------KNSVSW-----NTMISGYAQAG 423
++ K+S+S N I Y +
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
+ A +F M R+ VSWN++I QN ++ L V M R +PD+ TF
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT--------- 534
G ++H I+KSG ++ V +LI MY+KCG +E AE++ +
Sbjct: 492 ACTGGSLG-YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 535 -AIECVD----------LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
+E ++ +SWNS+ISGY + + +A F +M+ + PD+ T+ +L
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSC--LVDLLGRMGRLEEAFNVVRGMDVK 641
C++ A G + +++ E ++ Y C LVD+ + G L ++ ++ ++
Sbjct: 611 DTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLR 666
Query: 642 ANAGLWGSLLGACRVHKNLE--IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE-VE 698
+ W +++ H E I F M L ++P N +I++ A G ++ +E
Sbjct: 667 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKP-NHVTFISILRACAHMGLIDKGLE 725
Query: 699 RLRVLMRD 706
++ RD
Sbjct: 726 YFYMMKRD 733
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 196/720 (27%), Positives = 367/720 (50%), Gaps = 65/720 (9%)
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKLEKARELLELVP 156
N I ++ EA + FD + +F ++ +I + L + R++ + +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 157 D---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
+ K DT N +++ Y K G DA +VF+ MP ++LVSY S++ GY+QNG+ A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 214 FFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFA 265
+ KM ++++V ++ ++ +S D+ +QL ++ + + ++ ++ +
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQD-------LQIDEAVKLFIKMPHK---- 314
R ++++A R+F +P K+++SW+++IA ++Q + E + + P++
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 315 -----------------------------DGVSWTTIINGYIRVGKLDEAREVYNQMPCK 345
+ ++ ++ + Y R G L+ AR V++Q+
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLF 401
D A+ +++GL G DEA +F+Q+ + D I S++ + + + + +
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 402 RQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEER-NIVSWNSLITGFLQNSLY 456
+ K + N++++ Y + N+F+ + VSWN+++T LQ+
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 457 FDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
+ L+ LM +PD T ++G+Q+H Y LK+G + F+ N L
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
I MYAKCG + A ++F +++ D++SW++LI GYA +G+ EA FK+M S + P+
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
VTF+G+L+ACSH GL +GL L+ M + I P EH SC+VDLL R GRL EA +
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 637 GMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
M ++ + +W +LL AC+ N+ + + AA + +++P N++ ++ L +MHA +G WE
Sbjct: 635 EMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEN 694
Query: 697 VERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDKFN 756
LR M+ K+PG SWIE++++I F ++D + I +L+ I + M D+ N
Sbjct: 695 AALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDECN 754
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/573 (24%), Positives = 255/573 (44%), Gaps = 84/573 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVM 124
N ++S++ K G + DAR++FD M +RNLVS+ ++I GY N EA +L+ D++
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 125 PERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTA----CWNAVIAGYAKKGQFSDA 180
P D F++ +I + ++L V KL+++ NA+IA Y + Q SDA
Sbjct: 166 P--DQFAFGSIIKACASSSDVGLGKQLHAQVI-KLESSSHLIAQNALIAMYVRFNQMSDA 222
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLS 240
+VF +P+KDL+S++S++AG++Q G AL ++M V N + G L
Sbjct: 223 SRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG----SSLK 278
Query: 241 SARQLFEKIPN---------------PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV 285
+ L P+ NA++ ++ +AR G + ARR+FD + +
Sbjct: 279 ACSSLLR--PDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQ 341
SWN +IA A + DEAV +F +M D +S +++ + L + ++++
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 342 MP----CKDIAAETALMSGLIQTGRVDEASKMFNQL-STRDTICWNSMIAGFCQSGRMDE 396
+ D+ +L++ + +F + D++ WN+++ Q + E
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 397 ALDLFRQM------PKKNSVS---------------------------------WNTMIS 417
L LF+ M P ++ N +I
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLID 516
Query: 418 GYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
YA+ G + A IF +M+ R++VSW++LI G+ Q+ +AL M G +P+ T
Sbjct: 517 MYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVT 576
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYI-LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
F + G +L+ + + G + ++ + A+ GR+ AE+ +
Sbjct: 577 FVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEM 636
Query: 537 EC-VDLISWNSLISGYALNGYAIEAFKAFKQML 568
+ D++ W +L+S G A KA + +L
Sbjct: 637 KLEPDVVVWKTLLSACKTQGNVHLAQKAAENIL 669
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 325 bits (833), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 163/446 (36%), Positives = 263/446 (58%), Gaps = 4/446 (0%)
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC--KD 346
N +I Y + + + ++F +MP +D VS+ ++I+GY++ G + ARE+++ MP K+
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 347 IAAETALMSGLIQTGR-VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+ + +++SG QT VD ASK+F + +D I WNSMI G+ + GR+++A LF MP
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP 279
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+++ V+W TMI GYA+ G + A+ +F M R++V++NS++ G++QN + +AL+
Sbjct: 280 RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSD 339
Query: 466 MGREGKK-PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
M +E PD +T +H YI++ + + ALI MY+KCG
Sbjct: 340 MEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCG 399
Query: 525 RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
++ A VF IE + WN++I G A++G AF Q+ + PD +TF+G+L+
Sbjct: 400 SIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLN 459
Query: 585 ACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANA 644
ACSH+GL +GL F+ M IEP +HY C+VD+L R G +E A N++ M V+ N
Sbjct: 460 ACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPND 519
Query: 645 GLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLM 704
+W + L AC HK E GE A L +N S+Y+ LSNM+A G W++V R+R +M
Sbjct: 520 VIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMM 579
Query: 705 RDKRAGKLPGCSWIEVQNQIQCFLSD 730
++++ K+PGCSWIE+ ++ F D
Sbjct: 580 KERKIEKIPGCSWIELDGRVHEFFVD 605
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 176/328 (53%), Gaps = 17/328 (5%)
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM 187
D F +I Y + G L +R++ + +P K D+ +N++I GY K G A ++F+LM
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMP-KRDSVSYNSMIDGYVKCGLIVSARELFDLM 213
Query: 188 PV--KDLVSYNSMLAGYTQNGK-MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQ 244
P+ K+L+S+NSM++GY Q + +A F M EK+++SWN M+ G+V G + A+
Sbjct: 214 PMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKG 273
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
LF+ +P + V+W TM+ G+A+ G + A+ LFD MP ++VV++N+M+A Y Q+ EA
Sbjct: 274 LFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEA 333
Query: 305 VKLFIKMPHK-----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI- 358
+++F M + D + ++ ++G+L +A +++ + K L LI
Sbjct: 334 LEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALID 393
Query: 359 ---QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVS 411
+ G + A +F + + WN+MI G G + A D+ Q+ K + ++
Sbjct: 394 MYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 412 WNTMISGYAQAGQMDSAENIFQAMEERN 439
+ +++ + +G + F+ M ++
Sbjct: 454 FVGVLNACSHSGLVKEGLLCFELMRRKH 481
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 193/399 (48%), Gaps = 44/399 (11%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFD--KMSQRNLVSWNTMI 105
K G + + ++F ++ V+YNSMI + K G I AR+LFD M +NL+SWN+MI
Sbjct: 168 KCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMI 227
Query: 106 AGYLHNS-MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW 164
+GY S V+ ASKLF MPE+D SW MI Y + G++E A+ L +++P + D W
Sbjct: 228 SGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR-DVVTW 286
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
+I GYAK G A+ +F+ MP +D+V+YNSM+AGY QN AL F M +++ +
Sbjct: 287 ATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHL 346
Query: 225 -----SWNLMVSGFVNSGDLSSARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARR 275
+ +++ G LS A + EK V ++ +++ G I A
Sbjct: 347 LPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAML 406
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGK 331
+F+ + K++ WNAMI A + A + +++ D +++ ++N G
Sbjct: 407 VFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGL 466
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
+ E GL+ + K+ +L + M+ +S
Sbjct: 467 VKE---------------------GLLCFELMRRKHKIEPRLQH-----YGCMVDILSRS 500
Query: 392 GRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAE 429
G ++ A +L +MP + N V W T ++ + + ++ E
Sbjct: 501 GSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGE 539
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 200/402 (49%), Gaps = 46/402 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
+L N +I ++ K G + +RQ+FD+M +R+ VS+N+MI GY+ ++ A +LFD+MP
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214
Query: 126 -ERDNF-SWALMITCYTRKGK-LEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEK 182
E N SW MI+ Y + ++ A +L +P+K D WN++I GY K G+ DA+
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK-DLISWNSMIDGYVKHGRIEDAKG 273
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
+F++MP +D+V++ +M+ GY + G + A F++M ++VV++N M++G+V + A
Sbjct: 274 LFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEA 333
Query: 243 RQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
++F + P+ + V +L A+ G++++A
Sbjct: 334 LEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA------------------------ 369
Query: 298 DLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL 357
ID + + K + G +I+ Y + G + A V+ + K I A++ GL
Sbjct: 370 ---IDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGL 426
Query: 358 IQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-- 411
G + A M Q+ D I + ++ SG + E L F M +K+ +
Sbjct: 427 AIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPR 486
Query: 412 ---WNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSLITG 449
+ M+ +++G ++ A+N+ + M E N V W + +T
Sbjct: 487 LQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTA 528
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 153/335 (45%), Gaps = 21/335 (6%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
K + + N I K G++E+A +F +++VT+ +MI +AK G + A+ LFD+M
Sbjct: 250 KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQM 309
Query: 94 SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER-----DNFSWALMITCYTRKGKLEKA 148
R++V++N+M+AGY+ N EA ++F M + D+ + +++ + G+L KA
Sbjct: 310 PHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA 369
Query: 149 RELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQN 205
++ + +K L A+I Y+K G A VF + K + +N+M+ G +
Sbjct: 370 IDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIH 429
Query: 206 GKMGLALHFFEKMAEKNVVSWNLMVSGFVN----SGDLSSARQLFEKIP-----NPNAVS 256
G A ++ ++ ++ G +N SG + FE + P
Sbjct: 430 GLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQH 489
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAA--YAQDLQIDEAV-KLFIKMP 312
+ M+ +R G I A+ L + MP + N V W + A + ++ + E V K I
Sbjct: 490 YGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQA 549
Query: 313 HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
+ S+ + N Y G + R V M + I
Sbjct: 550 GYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKI 584
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G Q+H ++ K+G +DLF+ N LI +Y KCG + + Q+F + D +S+NS+I GY
Sbjct: 140 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK 199
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G + A + F M E + + +++ M+S + + G+D+ + D + L
Sbjct: 200 CGLIVSARELFDLMPME--MKNLISWNSMISGYAQ---TSDGVDIASKLFADMPEKDLIS 254
Query: 614 HYSCLVDLLGRMGRLEEA---FNVVRGMDV 640
++ ++D + GR+E+A F+V+ DV
Sbjct: 255 -WNSMIDGYVKHGRIEDAKGLFDVMPRRDV 283
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 208/714 (29%), Positives = 345/714 (48%), Gaps = 110/714 (15%)
Query: 139 YTRKGKLEKARELLELVPDKLD----TACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVS 194
+ G LE A +LL V K D T C +V+ A D ++V N + V
Sbjct: 71 FCESGNLENAVKLL-CVSGKWDIDPRTLC--SVLQLCADSKSLKDGKEVDNFIRGNGFVI 127
Query: 195 YNSMLAG----YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
+++ + YT G + A F+++ + + WN++++ SGD S + LF+K+
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 251 NPNA-VSWVTMLC-------------GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
+ + T C G HG I ++ +N V N+++A Y
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS-----GFGERNSVG-NSLVAFYL 241
Query: 297 QDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM-- 354
++ ++D A K+F +M +D +SW +IINGY+ G ++ V+ QM I + A +
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 355 -------SGLIQTGR------------------------------VDEASKMFNQLSTRD 377
S LI GR +D A +F ++S R
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMP-------------------------------- 405
+ + SMIAG+ + G EA+ LF +M
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 406 --KKNSVSWNTMISG-----YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFD 458
K+N + ++ +S YA+ G M AE +F M ++I+SWN++I G+ +N +
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 459 ALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
AL L+ E + PD+ T G ++H YI+++GY +D V+N+L+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 518 AMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
MYAKCG + A +F I DL+SW +I+GY ++G+ EA F QM + D++
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601
Query: 578 TFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRG 637
+F+ +L ACSH+GL ++G F M + IEP EHY+C+VD+L R G L +A+ +
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 661
Query: 638 MDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEV 697
M + +A +WG+LL CR+H ++++ E A ++ ELEP N Y+ ++N++AEA +WE+V
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQV 721
Query: 698 ERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHM 751
+RLR + + K PGCSWIE++ ++ F++ DS E I+ L + A M
Sbjct: 722 KRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 195/394 (49%), Gaps = 30/394 (7%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPERDN 129
NS+++ + KN ++ AR++FD+M++R+++SWN++I GY+ N + E+ +F ++
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 130 FSWALMITCY-----TRKGKLEKARELLELVP--DKLDTACWNAVIAGYAKKGQFSDAEK 182
A +++ + +R L +A + + + D C N ++ Y+K G A+
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKA 352
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD---- 238
VF M + +VSY SM+AGY + G G A+ FE+M E+ + V+ +N
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 239 LSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
L +++ E I + + ++ +A+ G + EA +F M K+++SWN +I
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 295 YAQDLQIDEAVKLF-----IKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
Y+++ +EA+ LF K D + ++ + D+ RE++ + +
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 350 ETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+ + + L+ + G + A +F+ ++++D + W MIAG+ G EA+ LF QM
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 406 K----KNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+ + +S+ +++ + +G +D F M
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 214/491 (43%), Gaps = 65/491 (13%)
Query: 51 KVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLH 110
+V+ +R I NL + S++ + G + +A ++FD++ + WN ++
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 111 NSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKARELLELVPDK---LDTAC 163
+ + LF M E D+++++ + ++ + +L + +
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV 232
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
N+++A Y K + A KVF+ M +D++S+NS++ GY NG L F +M +
Sbjct: 233 GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 292
Query: 224 -VSWNLMVSGFVNSGD--LSSARQLFEKIPNPNAVSWVTMLCG-----FARHGKITEARR 275
+ +VS F D L S + I S C +++ G + A+
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGK 331
+F M ++VVS+ +MIA YA++ EAVKLF +M + D + T ++N R
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 332 LDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
LDE + V+ + DI ALM + G + EA +F+++ +D I WN++I G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 388 FCQSGRMDEALDLF-------RQMPKKNSVSW---------------------------- 412
+ ++ +EAL LF R P + +V+
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 413 -----NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
N+++ YA+ G + A +F + +++VSW +I G+ + +A+ M
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 468 REGKKPDQSTF 478
+ G + D+ +F
Sbjct: 593 QAGIEADEISF 603
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 194/451 (43%), Gaps = 71/451 (15%)
Query: 27 TIGSIGGKHVFNKNQQIIH-----LGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
+ SIG K F++ + + K G ++ A VF +++V+Y SMI+ +A+ G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 82 KISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTR 141
+A +LF++M + + D ++ ++ C R
Sbjct: 377 LAGEAVKLFEEMEEEGISP---------------------------DVYTVTAVLNCCAR 409
Query: 142 KGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
L++ + + E + + D NA++ YAK G +AE VF+ M VKD++S+N++
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 469
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVVSWN-----LMVSGFVNSGDLSSARQLFEKIPNPN 253
+ GY++N AL F + E+ S + ++ + R++ I
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 254 -------AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
A S V M +A+ G + A LFD + K++VSW MIA Y EA+
Sbjct: 530 YFSDRHVANSLVDM---YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 307 LFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQM--PCK---DIAAETALMSGL 357
LF +M D +S+ +++ G +DE +N M CK + ++ L
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Query: 358 IQTGRVDEASKMFNQLS-TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK-------NS 409
+TG + +A + + D W +++ G R+ + L ++ +K N+
Sbjct: 647 ARTGDLIKAYRFIENMPIPPDATIWGALLCGC----RIHHDVKLAEKVAEKVFELEPENT 702
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+ M + YA+A + + + + + + +R +
Sbjct: 703 GYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 138/318 (43%), Gaps = 30/318 (9%)
Query: 33 GKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDK 92
G +F N + K G ++EA VFS K+++++N++I ++KN ++A LF+
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488
Query: 93 MSQRNLVSWN-----TMIAGYLHNSMVEEASKLFDVMPERDNFS----WALMITCYTRKG 143
+ + S + ++ S ++ ++ + FS ++ Y + G
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 144 KLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSML 199
L A L + + K D W +IAGY G +A +FN M D +S+ S+L
Sbjct: 549 ALLLAHMLFDDIASK-DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 607
Query: 200 AGYTQNGKMGLALHFFEKM-----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPN 253
+ +G + FF M E V + +V +GDL A + E +P P+
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD 667
Query: 254 AVSWVTMLCGFARHG--KITE--ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
A W +LCG H K+ E A ++F+ P +N + M YA+ + ++ +L
Sbjct: 668 ATIWGALLCGCRIHHDVKLAEKVAEKVFELEP-ENTGYYVLMANIYAEAEKWEQVKRLRK 726
Query: 310 KMPHK-----DGVSWTTI 322
++ + G SW I
Sbjct: 727 RIGQRGLRKNPGCSWIEI 744
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/737 (27%), Positives = 368/737 (49%), Gaps = 92/737 (12%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
KN+ +NS+I F+KNG +A + + K+ + VS + Y S+++ + LFD
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESK-VSPDK----YTFPSVIKACAGLFDA- 122
Query: 125 PERDNFSWALMITCYTRKGKLEKARELLELVPDKL-------DTACWNAVIAGYAKKGQF 177
E+ +LV +++ D NA++ Y++ G
Sbjct: 123 -------------------------EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLL 157
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS- 236
+ A +VF+ MPV+DLVS+NS+++GY+ +G AL + ++ +V + VS + +
Sbjct: 158 TRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAF 217
Query: 237 GDLSSARQ-------LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN 289
G+L +Q + N V ++ + + + T+ARR+FD M ++ VS+N
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYN 277
Query: 290 AMIAAYAQDLQIDEAVKLFIK---MPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKD 346
MI Y + ++E+V++F++ D ++ ++++ + L A+ +YN M
Sbjct: 278 TMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 347 IAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFR 402
E+ + + LI + G + A +FN + +DT+ WNS+I+G+ QSG + EA+ LF+
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 403 QM----PKKNSVSW-----------------------------------NTMISGYAQAG 423
M + + +++ N +I YA+ G
Sbjct: 398 MMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCG 457
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
++ + IF +M + V+WN++I+ ++ + L+ M + PD +TF
Sbjct: 458 EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP 517
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS 543
++G ++H +L+ GY ++L + NALI MY+KCG +E++ +VF + D+++
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 544 WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV 603
W +I Y + G +A + F M +VPD V FI ++ ACSH+GL ++GL F+ M
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Query: 604 EDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIG 663
+ I+P+ EHY+C+VDLL R ++ +A ++ M +K +A +W S+L ACR ++E
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA 697
Query: 664 EFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQ 723
E + R+ EL P + I SN +A +W++V +R ++DK K PG SWIEV
Sbjct: 698 ERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKN 757
Query: 724 IQCFLSDDSGRLRPETI 740
+ F S D + E I
Sbjct: 758 VHVFSSGDDSAPQSEAI 774
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 259/544 (47%), Gaps = 58/544 (10%)
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSAR 243
P K++ +NS++ +++NG AL F+ K+ E V ++ ++ D
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 244 QLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
++E+I + S + ++ ++R G +T AR++FD MP +++VSWN++I+ Y+
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 300 QIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVY----NQMPCKDIAAET 351
+EA++++ ++ + D + ++++ + + + + + ++ +
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ-----MPK 406
L++ ++ R +A ++F+++ RD++ +N+MI G+ + ++E++ +F + P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPD 306
Query: 407 KNSVS---------------------------------WNTMISGYAQAGQMDSAENIFQ 433
+VS N +I YA+ G M +A ++F
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
+ME ++ VSWNS+I+G++Q+ +A+K +M ++ D T+ +
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G LH +KSG DL VSNALI MYAKCG V + ++F+++ D ++WN++IS
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G + QM EVVPD TF+ L C+ G ++ C++ F E +
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQ 545
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFAAMRLS 671
+ L+++ + G LE + V M + + W ++ A ++ E + FA M S
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604
Query: 672 ELEP 675
+ P
Sbjct: 605 GIVP 608
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N I K G +E + RVF +++VT+ MI + G+ A + F M + +V
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 100 S----WNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARE 150
+ +I H+ +V+E F+ M +A ++ +R K+ KA E
Sbjct: 608 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 667
Query: 151 LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKV 183
++ +P K D + W +V+ G AE+V
Sbjct: 668 FIQAMPIKPDASIWASVLRACRTSGDMETAERV 700
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 218/803 (27%), Positives = 396/803 (49%), Gaps = 86/803 (10%)
Query: 27 TIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTY---------NSMISVF 77
TIG I G+ F + Q+ + + + + N +H ++ + N +I+++
Sbjct: 38 TIG-IRGRREFARLLQL-------RASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLY 89
Query: 78 AKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPERDNFSWALMI 136
++ G + AR++F+KM +RNLVSW+TM++ H+ + EE+ +F + R + ++
Sbjct: 90 SRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYIL 149
Query: 137 TCYTR-------KGKLEKARELLELVPDKLDTACW--NAVIAGYAKKGQFSDAEKVFNLM 187
+ + + +G+ + LV D + +I Y K G A VF+ +
Sbjct: 150 SSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDAL 209
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD----LSSAR 243
P K V++ +M++G + G+ ++L F ++ E NVV ++S +++ L +
Sbjct: 210 PEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGK 269
Query: 244 QLFEKIPNP----NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
Q+ I +A ++ + + G++ A +LF+ MP KN++SW +++ Y Q+
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329
Query: 300 QIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
EA++LF M D + ++I+ + L +V+ ++ ++ + +
Sbjct: 330 LHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389
Query: 356 GLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG---RMDEALDLFRQMPKK- 407
LI + + +A K+F+ + D + +N+MI G+ + G + EAL++FR M +
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 408 ------------------NSVSWNTMISG-----------YAQAGQMDSAEN-------- 430
S+ + I G +A + +D N
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSR 509
Query: 431 -IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
+F M+ +++V WNS+ G++Q S +AL + + ++PD+ TF
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
Q+G + H +LK G + +++NAL+ MYAKCG E A + F + D++ WNS+IS
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
YA +G +A + ++M+SE + P+ +TF+G+LSACSHAGL GL F+ M+ F IE
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIE 688
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMR 669
P EHY C+V LLGR GRL +A ++ M K A +W SLL C N+E+ E AA
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM 748
Query: 670 LSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLS 729
+P ++ ++ LSN++A G W E +++R M+ + K PG SWI + ++ FLS
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLS 808
Query: 730 DDSGRLRPETIQIILNAISAHMR 752
D + I +L+ + +R
Sbjct: 809 KDKSHCKANQIYEVLDDLLVQIR 831
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 205/454 (45%), Gaps = 55/454 (12%)
Query: 15 HKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMI 74
H + + H TI + G + N I K + +A +VF ++V +N+MI
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 75 SVFAKNG---KISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
+++ G ++ +A +F M R +L+++ +++ + + + ++ +M
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM--- 480
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM 187
F + L LD +A+I Y+ D+ VF+ M
Sbjct: 481 --FKYGL-----------------------NLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN-SGDLSSAR--- 243
VKDLV +NSM AGY Q + AL+ F ++ + V +G+L+S +
Sbjct: 516 KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQ 575
Query: 244 ----QLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
QL ++ N +L +A+ G +A + FDS ++VV WN++I++YA
Sbjct: 576 EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHG 635
Query: 300 QIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET---- 351
+ +A+++ KM + + +++ +++ G +++ + + M I ET
Sbjct: 636 EGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYV 695
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTRD-TICWNSMIAGFCQSGRM---DEALDLFRQMPKK 407
++S L + GR+++A ++ ++ T+ I W S+++G ++G + + A ++ K
Sbjct: 696 CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPK 755
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
+S S+ + + YA G A+ + + M+ +V
Sbjct: 756 DSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/458 (38%), Positives = 250/458 (54%), Gaps = 35/458 (7%)
Query: 301 IDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT 360
I A K+F +M K+ V WT++INGY+ L AR ++ P
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSP----------------- 86
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYA 420
RD + WN+MI+G+ + G M EA LF QMP ++ +SWNT++ GYA
Sbjct: 87 --------------ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYA 132
Query: 421 QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK-PDQSTFX 479
G M++ E +F M ERN+ SWN LI G+ QN + L S M EG P+ +T
Sbjct: 133 NIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMT 192
Query: 480 XXXXXXXXXXXXQVGNQLHEYILKSGYIN-DLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
G +H+Y GY D+ V NALI MY KCG +E A +VF I+
Sbjct: 193 LVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR 252
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
DLISWN++I+G A +G+ EA F +M + + PD+VTF+G+L AC H GL GL
Sbjct: 253 RDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAY 312
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHK 658
F M DF+I P EH C+VDLL R G L +A + M VKA+A +W +LLGA +V+K
Sbjct: 313 FNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYK 372
Query: 659 NLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
++IGE A L +LEP N +N++ LSN++ +AGR+++ RL+V MRD K G SWI
Sbjct: 373 KVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWI 432
Query: 719 EVQNQIQCFLSDDSGRLRPETIQIILNAISAH--MRDK 754
E + + F S R E +Q IL + + +RD+
Sbjct: 433 ETDDGLVKFYSSGEKHPRTEELQRILRELKSFNILRDE 470
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 18/248 (7%)
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV 234
G + A KVF M K++V + SM+ GY N + A +F+ E+++V WN M+SG++
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 235 NSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
G++ AR LF+++P + +SW T+L G+A G + R+FD MP +NV SWN +I
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 295 YAQDLQIDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREV--------YNQ 341
YAQ+ ++ E + F +M + V + T +++ ++G D + V YN+
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ D+ + AL+ + G ++ A ++F + RD I WN+MI G G EAL+LF
Sbjct: 222 V---DVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLF 278
Query: 402 RQMPKKNS 409
+M KNS
Sbjct: 279 HEM--KNS 284
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 57/384 (14%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
+G + A +VF + KN+V + SMI+ + N + AR+ FD +R++V WNTMI+GY
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGY 100
Query: 109 LHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVI 168
+ + EA LFD MP RD SW ++ Y G +E + + +P++ + WN +I
Sbjct: 101 IEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPER-NVFSWNGLI 159
Query: 169 AGYAKKGQFSDAEKVFNLMPVK-------------------------------------- 190
GYA+ G+ S+ F M +
Sbjct: 160 KGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGY 219
Query: 191 ---DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
D+ N+++ Y + G + +A+ F+ + ++++SWN M++G G + A LF
Sbjct: 220 NKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFH 279
Query: 248 KIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQ--- 300
++ N P+ V++V +LC G + + F+SM + DL
Sbjct: 280 EMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRA 339
Query: 301 --IDEAVKLFIKMPHK-DGVSWTTIING---YIRVGKLDEAREVYNQMPCKDIAAETALM 354
+ +AV+ KMP K D V W T++ Y +V + A E ++ ++ A L
Sbjct: 340 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 399
Query: 355 SGLIQTGRVDEASKMFNQLSTRDT 378
+ GR D+A+++ +++ RDT
Sbjct: 400 NIYGDAGRFDDAARL--KVAMRDT 421
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 186/435 (42%), Gaps = 90/435 (20%)
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSW 319
MLC G I A ++F M KNVV W +MI Y + + A + F P +D V W
Sbjct: 37 MLC---LMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
T+I+GYI +G + EAR +++QMPC+D+ + ++ G G ++ ++F+ + R+
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMPKKNSV-----------------------SW---- 412
WN +I G+ Q+GR+ E L F++M + SV W
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 413 --------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFD 458
N +I Y + G ++ A +F+ ++ R+++SWN++I G + +
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG--YINDLFVSNAL 516
AL M G PD+ TF H +++ G Y N +F ++
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACK-----------HMGLVEDGLAYFNSMFTDFSI 322
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
+ CG V VDL+S G+ +A + +M V D
Sbjct: 323 MPEIEHCGCV------------VDLLS---------RAGFLTQAVEFINKM---PVKADA 358
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDF-AIEPL-AEHYSCLVDLLGRMGRLEEAFNV 634
V + +L A + +D+ + +E+ +EP ++ L ++ G GR ++A +
Sbjct: 359 VIWATLLGASK----VYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARL 414
Query: 635 ---VRGMDVKANAGL 646
+R K AG+
Sbjct: 415 KVAMRDTGFKKEAGV 429
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 171/366 (46%), Gaps = 56/366 (15%)
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
W ++I GY A + F+L P +D+V +N+M++GY + G M A F++M ++V
Sbjct: 62 WTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDV 121
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEA----RRLFDS 279
+SWN ++ G+ N GD+ + ++F+ +P N SW ++ G+A++G+++E +R+ D
Sbjct: 122 MSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDE 181
Query: 280 ---MP-----------CKNVVSW-----------------------NAMIAAYAQDLQID 302
+P C + ++ NA+I Y + I+
Sbjct: 182 GSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIE 241
Query: 303 EAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI---- 358
A+++F + +D +SW T+ING G EA ++++M I+ + G++
Sbjct: 242 IAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACK 301
Query: 359 QTGRVDEASKMFNQLSTRDTI------CWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVS 411
G V++ FN + T +I C ++ ++G + +A++ +MP K ++V
Sbjct: 302 HMGLVEDGLAYFNSMFTDFSIMPEIEHC-GCVVDLLSRAGFLTQAVEFINKMPVKADAVI 360
Query: 412 WNTMISGYAQAGQMDSAENIFQ---AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
W T++ ++D E + +E RN ++ L + + DA + V M
Sbjct: 361 WATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRD 420
Query: 469 EGKKPD 474
G K +
Sbjct: 421 TGFKKE 426
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 318 bits (815), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 234/840 (27%), Positives = 386/840 (45%), Gaps = 161/840 (19%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
LGK A R+ + + N++IS+++K G ++ AR++FDKM R+LVSWN+++A Y
Sbjct: 57 LGKCTHA-RILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 109 LHNSM-----VEEASKLFDVMPER------------------------------------ 127
+S +++A LF ++ +
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 128 ---DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAK----------- 173
D F ++ Y + GK+++ + L E +P + D WN ++ Y +
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 174 ---------------------KGQFSDAEKVFNLM------PVKDLVSYNSMLAGYTQNG 206
G SDA +V + V +++ N L+ Y +G
Sbjct: 235 SAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSG 294
Query: 207 KMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQ-----------LFEKIPN 251
+ L F M E +V V++ LM++ V L+ +Q L + N
Sbjct: 295 QYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSN 354
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
S + M C + G AR +FD+M ++++SWN++IA AQ+ EAV LF+++
Sbjct: 355 ----SLINMYCKLRKFGF---ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL 407
Query: 312 PH----KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA--------AETALMSGLIQ 359
D + T+++ L E + Q+ I TAL+ +
Sbjct: 408 LRCGLKPDQYTMTSVLKA---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-------- 411
+ EA +F + D + WN+M+AG+ QS + L LF M K+ S
Sbjct: 465 NRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 412 -----------------------------W--NTMISGYAQAGQMDSAENIFQAMEERNI 440
W + ++ Y + G M +A+ F ++ +
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 441 VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEY 500
V+W ++I+G ++N A M G PD+ T + G Q+H
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 501 ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEA 560
LK ND FV +L+ MYAKCG ++ A +F IE +++ +WN+++ G A +G E
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKET 703
Query: 561 FKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVD 620
+ FKQM S + PD+VTFIG+LSACSH+GL ++ + M D+ I+P EHYSCL D
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Query: 621 LLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASN 680
LGR G +++A N++ M ++A+A ++ +LL ACRV + E G+ A +L ELEP ++S
Sbjct: 764 ALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA 823
Query: 681 YITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
Y+ LSNM+A A +W+E++ R +M+ + K PG SWIEV+N+I F+ DD + E I
Sbjct: 824 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELI 883
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 204/436 (46%), Gaps = 43/436 (9%)
Query: 227 NLMVSGFVNSGDLSSARQL-FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV 285
N + S + G + AR L FE+ NP ++ +++ G +T ARR+FD MP +++
Sbjct: 48 NAITSSDLMLGKCTHARILTFEE--NPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 286 VSWNAMIAAYAQDLQ-----IDEAVKLFIKMPHKDGVSWTTII----------NGYIRVG 330
VSWN+++AAYAQ + I +A LF ++ +D V + + +GY+
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVW-- 162
Query: 331 KLDEAREVYNQMPCK-----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
A E ++ CK D AL++ ++ G+V E +F ++ RD + WN M+
Sbjct: 163 ----ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLML 218
Query: 386 AGFCQSGRMDEALDLFRQM------PKKNSVSWNTMISGY-AQAGQMDSAENIFQAMEER 438
+ + G +EA+DL P + ++ ISG + AGQ+ S N A
Sbjct: 219 KAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVS 278
Query: 439 NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
I+ N ++ +L + Y LK M + DQ TF +G Q+H
Sbjct: 279 EIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVH 338
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
LK G L VSN+LI MY K + A VF + DLISWNS+I+G A NG +
Sbjct: 339 CMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEV 398
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK-CMVEDFAIEPLAEHY-- 615
EA F Q+L + PDQ T +L A S +GL L K V I +++ +
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVS 455
Query: 616 SCLVDLLGRMGRLEEA 631
+ L+D R ++EA
Sbjct: 456 TALIDAYSRNRCMKEA 471
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/683 (28%), Positives = 328/683 (48%), Gaps = 122/683 (17%)
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
D N ++ + G++ A +++M KN VS N M+SG V +GD+SSAR LF+ +P
Sbjct: 47 DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSM------------------P-CKNVVSWNA- 290
+ V+W ++ +AR+ EA +LF M P C + V NA
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV 166
Query: 291 -----------------------MIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYI 327
++ +Y + ++D A LF ++P KD V++ T+I GY
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 328 RVGKLDEAREVYNQM------PC--------------KDIAAETALMSGLIQTG------ 361
+ G E+ ++ +M P D A L + + TG
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 362 -------------RVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM---- 404
RV E +F+++ D + +N +I+ + Q+ + + +L FR+M
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 405 ------PKKNSVS-----------------------------WNTMISGYAQAGQMDSAE 429
P +S N+++ YA+ + AE
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
IF+++ +R VSW +LI+G++Q L+ LK M + DQSTF
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
+G QLH +I++SG + ++F + L+ MYAKCG ++ A QVF + + +SWN+LIS
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
+A NG A AF +M+ + PD V+ +G+L+ACSH G QG + F+ M + I
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT 586
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMR 669
P +HY+C++DLLGR GR EA ++ M + + +W S+L ACR+HKN + E AA +
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK 646
Query: 670 LSELEP-HNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL 728
L +E +A+ Y+++SN++A AG WE+V ++ MR++ K+P SW+EV ++I F
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFS 706
Query: 729 SDDSGRLRPETIQIILNAISAHM 751
S+D + I +N ++A +
Sbjct: 707 SNDQTHPNGDEIVRKINELTAEI 729
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 149/544 (27%), Positives = 255/544 (46%), Gaps = 59/544 (10%)
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
DT N ++ ++GQ S A KV++ MP K+ VS N+M++G+ + G + A F+ M
Sbjct: 47 DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN------PNAVSWVTMLCGFARH------ 267
++ VV+W +++ + + A +LF ++ P+ V++ T+L G
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV 166
Query: 268 GKITE-ARRL-FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIING 325
G++ A +L FD+ P V N ++ +Y + ++D A LF ++P KD V++ T+I G
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 326 YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ--TGRVDEA-SKMFNQLS-----TRD 377
Y + G E+ ++ +M SG+++ G D A + + LS +RD
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
N ++ + + R+ E LF +MP+ + VS+N +IS Y+QA Q +++ + F+ M+
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ- 343
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
GF + + F + S+ Q+G QL
Sbjct: 344 ---------CMGFDRRNFPFATMLSIA---------------------ANLSSLQMGRQL 373
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYA 557
H L + + L V N+L+ MYAKC E AE +F ++ +SW +LISGY G
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSC 617
K F +M + DQ TF +L A + G L ++ +E + S
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SG 492
Query: 618 LVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFAAMRLSELEP 675
LVD+ + G +++A V M + NA W +L+ A + + E IG FA M S L+P
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Query: 676 HNAS 679
+ S
Sbjct: 552 DSVS 555
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 152/638 (23%), Positives = 272/638 (42%), Gaps = 90/638 (14%)
Query: 46 LGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMI 105
L + G+V A +V+ HKN V+ N+MIS K G +S AR LFD M R +V+W ++
Sbjct: 58 LLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILM 117
Query: 106 AGYLHNSMVEEASKLFDVM--------PERDNFSWALMITCYTRKGKLEKARELLELVPD 157
Y NS +EA KLF M P+ F+ L+ C + + V
Sbjct: 118 GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT-TLLPGCNDAVPQNAVGQVHAFAVKL 176
Query: 158 KLDTACW----NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
DT + N ++ Y + + A +F +P KD V++N+++ GY ++G ++H
Sbjct: 177 GFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIH 236
Query: 214 FFEKMAEKNVVSWNLMVSGFVNS----GDLSSARQLFEKIPNPNAVSWVT---------- 259
F KM + + SG + + D + +QL +A+S T
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL-------HALSVTTGFSRDASVGN 289
Query: 260 -MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HK 314
+L +++H ++ E R LFD MP + VS+N +I++Y+Q Q + ++ F +M +
Sbjct: 290 QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDR 349
Query: 315 DGVSWTTIINGYIRVGKLDEAREVYNQ--MPCKD--IAAETALMSGLIQTGRVDEASKMF 370
+ T+++ + L R+++ Q + D + +L+ + +EA +F
Sbjct: 350 RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF 409
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN--------------SVSWNTMI 416
L R T+ W ++I+G+ Q G L LF +M N S S+ +++
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 417 SG-------------------------YAQAGQMDSAENIFQAMEERNIVSWNSLITGFL 451
G YA+ G + A +F+ M +RN VSWN+LI+
Sbjct: 470 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA 529
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
N A+ + M G +PD + + G EY I +
Sbjct: 530 DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGT---EYFQAMSPIYGIT 586
Query: 512 VSN----ALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYALNGYAIEAFKAFKQ 566
++ + + GR AE++ + D I W+S+++ ++ A +A ++
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK 646
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
+ S E + D ++ M + + AG + D+ K M E
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 219/481 (45%), Gaps = 50/481 (10%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+H LG+ A+ V + ++ N ++ ++K+ ++ + R LFD+M + + VS+N
Sbjct: 263 LHDFALGQQLHALSV-TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 104 MIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAREL----LELV 155
+I+ Y E + F M +R NF +A M++ L+ R+L L
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT 381
Query: 156 PDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
D + N+++ YAK F +AE +F +P + VS+ ++++GY Q G G L F
Sbjct: 382 ADSI-LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 216 EKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARH 267
KM N+ ++ ++ + L +QL I N S ++ +A+
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 500
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTII 323
G I +A ++F+ MP +N VSWNA+I+A+A + + A+ F KM D VS ++
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVL 560
Query: 324 NGYIRVGKLDEAREVYNQM-PCKDIAAE----TALMSGLIQTGRVDEASKMFNQLS-TRD 377
G +++ E + M P I + ++ L + GR EA K+ +++ D
Sbjct: 561 TACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 620
Query: 378 TICWNSMIAGFC-----QSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIF 432
I W+S++ C QS A LF +++ ++ +M + YA AG+ + ++
Sbjct: 621 EIMWSSVLNA-CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 433 QAMEERNI-----VSW---NSLITGFLQNSLYFDALKSLVL--------MGREGKKPDQS 476
+AM ER I SW N I F N +V + REG KPD S
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Query: 477 T 477
+
Sbjct: 740 S 740
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 6/233 (2%)
Query: 357 LIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
+ T RVD +++ DT N ++ + G++ A ++ +MP KN+VS NTMI
Sbjct: 29 FLDTRRVD--ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMI 86
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK--KPD 474
SG+ + G + SA ++F AM +R +V+W L+ + +NS + +A K M R PD
Sbjct: 87 SGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPD 146
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF--VSNALIAMYAKCGRVESAEQV 532
TF Q+H + +K G+ + F VSN L+ Y + R++ A +
Sbjct: 147 HVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVL 206
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
F I D +++N+LI+GY +G E+ F +M P TF G+L A
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H I S ++VF+ + + K G +++AV+VF +N V++N++IS A NG
Sbjct: 475 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYL----HNSMVEEASKLFDVM-------PERDNFSW 132
A F KM + L + I G L H VE+ ++ F M P++ + +
Sbjct: 535 EAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH--Y 592
Query: 133 ALMITCYTRKGKLEKARELLELVPDKLDTACWNAVI-AGYAKKGQF---SDAEKVFNLMP 188
A M+ R G+ +A +L++ +P + D W++V+ A K Q AEK+F++
Sbjct: 593 ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652
Query: 189 VKDLVSYNSMLAGYTQNGK 207
++D +Y SM Y G+
Sbjct: 653 LRDAAAYVSMSNIYAAAGE 671
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 317 bits (811), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 218/755 (28%), Positives = 360/755 (47%), Gaps = 87/755 (11%)
Query: 53 EEAVRVFSNTIHKNLV-------TY--NSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+E ++ IH +V TY N ++ ++ + G AR++FD+MS R++ SWN
Sbjct: 18 DERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNA 77
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE------LVPD 157
+ + EA ++FD MPERD SW MI+ RKG EKA + + +P
Sbjct: 78 FLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPS 137
Query: 158 KLD-----TAC---------------------------WNAVIAGYAKKGQFSD-AEKVF 184
+ +AC NA+++ YAK G D +VF
Sbjct: 138 RFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF 197
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN-SGDLSSAR 243
+ + VSY +++ G + K+ A+ F M EK V ++ +S ++ S
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 244 QLFEKIPNP--NAVSWVTMLCGF--------------ARHGKITEARRLFDSMPCKNVVS 287
L E N + + + GF A++ + A +F MP NVVS
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMP 343
WN MI + Q+ + D++V+ +M + V+ +++ R G ++ R +++ +P
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP 377
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQL---------STRDTICWNSMIAGFCQSGRM 394
++A A++SG +EA F Q+ +T I + F + G+
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Query: 395 DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ-AMEERNIVSWNSLITGFLQN 453
+ + R KNS + +I+ Y++ +M+ +E IF + E +I WNS+I+GF N
Sbjct: 438 IHGV-VIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHN 496
Query: 454 SLYFDALKSLVLMGREGKK----PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
L K+L+L R + P++++F G Q H ++KSGY++D
Sbjct: 497 ML---DTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSD 553
Query: 510 LFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS 569
FV AL MY KCG ++SA Q F A+ + + WN +I GY NG EA +++M+S
Sbjct: 554 SFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMIS 613
Query: 570 EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLE 629
PD +TF+ +L+ACSH+GL GL++ M IEP +HY C+VD LGR GRLE
Sbjct: 614 SGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLE 673
Query: 630 EAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHA 689
+A + K+++ LW LL +CRVH ++ + A +L L+P +++ Y+ LSN ++
Sbjct: 674 DAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYS 733
Query: 690 EAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQI 724
+W++ L+ LM R K PG SW N +
Sbjct: 734 SLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNT 103
K G+++ A + F + KN V +N MI + NG+ +A L+ KM + + +++ +
Sbjct: 566 KCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVS 625
Query: 104 MIAGYLHNSMVEEASKLFDVM-------PERDNFSWALMITCYTRKGKLEKARELLELVP 156
++ H+ +VE ++ M PE D++ ++ C R G+LE A +L E P
Sbjct: 626 VLTACSHSGLVETGLEILSSMQRIHGIEPELDHY--ICIVDCLGRAGRLEDAEKLAEATP 683
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKV 183
K + W +++ G S A +V
Sbjct: 684 YKSSSVLWEILLSSCRVHGDVSLARRV 710
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 186/633 (29%), Positives = 320/633 (50%), Gaps = 82/633 (12%)
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF--------------- 246
Y G + LA H F+ + ++V +WNLM+SG+ +G+ S + F
Sbjct: 96 YCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRT 155
Query: 247 --------EKIPNPNAVSWVTMLCGF--------------ARHGKITEARRLFDSMPCKN 284
+ + N + + + GF +R+ + AR LFD MP ++
Sbjct: 156 FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD 215
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
+ SWNAMI+ Y Q EA+ L + D V+ ++++ G + +++
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 345 KDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
+ +E + + LI + GR+ + K+F+++ RD I WNS+I + + + A+ L
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 401 FRQM------PKKNSV--------------------------SW--------NTMISGYA 420
F++M P ++ W N ++ YA
Sbjct: 336 FQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 421 QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFX 479
+ G +DSA +F + +++SWN++I+G+ QN +A++ +M EG+ +Q T+
Sbjct: 396 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWV 455
Query: 480 XXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV 539
+ G +LH +LK+G D+FV +L MY KCGR+E A +F I V
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV 515
Query: 540 DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLF 599
+ + WN+LI+ + +G+ +A FK+ML E V PD +TF+ +LSACSH+GL ++G F
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF 575
Query: 600 KCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKN 659
+ M D+ I P +HY C+VD+ GR G+LE A ++ M ++ +A +WG+LL ACRVH N
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Query: 660 LEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
+++G+ A+ L E+EP + ++ LSNM+A AG+WE V+ +R + K K PG S +E
Sbjct: 636 VDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSME 695
Query: 720 VQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
V N+++ F + + E + L A+ A ++
Sbjct: 696 VDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 216/507 (42%), Gaps = 97/507 (19%)
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDE 334
RL S +NV ++ Y + A F + ++D +W +I+GY R G E
Sbjct: 76 RLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSE 135
Query: 335 AREVY-----------------------------NQMPCK--------DIAAETALMSGL 357
+ N++ C D+ +L+
Sbjct: 136 VIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLY 195
Query: 358 IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL---FRQMPKKNSVSW-- 412
+ V A +F+++ RD WN+MI+G+CQSG EAL L R M VS
Sbjct: 196 SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLS 255
Query: 413 ------------------------------NTMISGYAQAGQMDSAENIFQAMEERNIVS 442
N +I YA+ G++ + +F M R+++S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
WNS+I + N A+ M +PD T + + + L
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 503 KSG-YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
+ G ++ D+ + NA++ MYAK G V+SA VF + D+ISWN++ISGYA NG+A EA
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 562 KAFKQMLSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED------FAIEPLAEH 614
+ + M E E+ +Q T++ +L ACS AG QG+ L ++++ F + LA
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLA-- 493
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSEL- 673
D+ G+ GRLE+A ++ + + N+ W +L+ H + GE A M E+
Sbjct: 494 -----DMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGH---GEKAVMLFKEML 544
Query: 674 ----EPHNASNYITLSNMHAEAGRWEE 696
+P + + ++TL + + +G +E
Sbjct: 545 DEGVKPDHIT-FVTLLSACSHSGLVDE 570
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 247/506 (48%), Gaps = 64/506 (12%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS 131
S+I ++++ + +AR LFD+M R++ SWN MI+GY + +EA L + + D+ +
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVT 249
Query: 132 WALMITCYTRKGKLEKARELLEL-VPDKLDTACW--NAVIAGYAKKGQFSDAEKVFNLMP 188
+++ T G + + + L++ + N +I YA+ G+ D +KVF+ M
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQ 244
V+DL+S+NS++ Y N + A+ F++M + + ++ + S GD+ + R
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRS 369
Query: 245 L----------FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
+ E I NAV V M +A+ G + AR +F+ +P +V+SWN +I+
Sbjct: 370 VQGFTLRKGWFLEDITIGNAV--VVM---YAKLGLVDSARAVFNWLPNTDVISWNTIISG 424
Query: 295 YAQDLQIDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQMPCK---- 345
YAQ+ EA++++ M + + +W +++ + G L + +++ ++
Sbjct: 425 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 484
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM- 404
D+ T+L + GR+++A +F Q+ +++ WN++IA G ++A+ LF++M
Sbjct: 485 DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 405 ---PKKNSVSWNTMISGYAQAGQMDSAENIFQAME-----ERNIVSWNSLI-----TGFL 451
K + +++ T++S + +G +D + F+ M+ ++ + ++ G L
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQL 604
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK-----SGY 506
+ +L F +KS+ L +PD S + +G E++ + GY
Sbjct: 605 ETALKF--IKSMSL------QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 656
Query: 507 INDLFVSNALIAMYAKCGRVESAEQV 532
+ +SN MYA G+ E +++
Sbjct: 657 --HVLLSN----MYASAGKWEGVDEI 676
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 136/612 (22%), Positives = 249/612 (40%), Gaps = 126/612 (20%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+N+ +++++ G ++ AR FD + R++ +WN MI+GY E + F +
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 125 -------PERDNFS-------------------------W-----ALMITCYTRKGKLEK 147
P+ F W A +I Y+R +
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN 203
Query: 148 ARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
AR L + +P + D WNA+I+GY + G +A + N + D V+ S+L+ T+ G
Sbjct: 204 ARILFDEMPVR-DMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGD 262
Query: 208 M--GLALH---------------------------------FFEKMAEKNVVSWNLMVSG 232
G+ +H F++M ++++SWN ++
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 233 FVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARR-----LFDSMPCK 283
+ + A LF+++ P+ ++ +++ ++ G I R L +
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMP 343
++ NA++ YA+ +D A +F +P+ D +SW TII+GY + G EA E+YN M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 344 CK-DIAAE----TALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRM 394
+ +IAA +++ Q G + + K+ +L D S+ + + GR+
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 395 DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
++AL LF Q+P+ NSV WNT+I+ + G + A +F+ M +
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD----------------- 545
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS-GYINDLFVS 513
EG KPD TF G E + G L
Sbjct: 546 --------------EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591
Query: 514 NALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEV 572
++ MY + G++E+A + ++ D W +L+S ++G A + + EV
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLF--EV 649
Query: 573 VPDQVTFIGMLS 584
P+ V + +LS
Sbjct: 650 EPEHVGYHVLLS 661
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 195/436 (44%), Gaps = 41/436 (9%)
Query: 50 GKVEEAVRVFSNTI----HKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMI 105
G V + S +I L N +I ++A+ G++ D +++FD+M R+L+SWN++I
Sbjct: 261 GDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSII 320
Query: 106 AGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDK--- 158
Y N A LF M + D + + + ++ G + R + K
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 159 -LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
D NAV+ YAK G A VFN +P D++S+N++++GY QNG A+ +
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 218 MAEK-----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNA---VSWVTMLCG-FARHG 268
M E+ N +W ++ +G L +L ++ V VT L + + G
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIIN 324
++ +A LF +P N V WN +IA + ++AV LF +M + D +++ T+++
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI-----QTGRVDEASKMFNQLSTR-DT 378
G +DE + + M + G + + G+++ A K +S + D
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 379 ICWNSMIAGFCQSGRMD----EALDLFRQMPKKNSVSWNTMISG-YAQAGQ---MDSAEN 430
W ++++ G +D + LF P+ V ++ ++S YA AG+ +D +
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEH--VGYHVLLSNMYASAGKWEGVDEIRS 678
Query: 431 IFQAMEERNIVSWNSL 446
I R W+S+
Sbjct: 679 IAHGKGLRKTPGWSSM 694
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 160/366 (43%), Gaps = 56/366 (15%)
Query: 46 LGKLGKVEEAVRVFSNTIHK-----NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS 100
L +LG + V T+ K ++ N+++ ++AK G + AR +F+ + +++S
Sbjct: 358 LSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417
Query: 101 WNTMIAGYLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKLEKARELL-EL 154
WNT+I+GY N EA +++++M E +W ++ ++ G L + +L L
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 155 VPDK--LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ + LD ++ Y K G+ DA +F +P + V +N+++A + +G A+
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 537
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITE 272
F++M ++ V P+ +++VT+L + G + E
Sbjct: 538 MLFKEMLDEGV---------------------------KPDHITFVTLLSACSHSGLVDE 570
Query: 273 ARRLFDSMPCKNVVS-----WNAMIAAYAQDLQIDEAVKLFIKMP-HKDGVSWTTI---- 322
+ F+ M ++ + M+ Y + Q++ A+K M D W +
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 323 -INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGR---VDEASKMFNQLSTRDT 378
++G + +GK+ A E ++ + + L + G+ VDE + + R T
Sbjct: 631 RVHGNVDLGKI--ASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKT 688
Query: 379 ICWNSM 384
W+SM
Sbjct: 689 PGWSSM 694
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 122/265 (46%), Gaps = 24/265 (9%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--- 96
N ++ KLG V+ A VF+ + +++++N++IS +A+NG S+A ++++ M +
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 97 --NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARE 150
N +W +++ + + KL + + D F + Y + G+LE A
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 151 LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM---PVK-DLVSYNSMLAGYTQNG 206
L +P ++++ WN +IA + G A +F M VK D +++ ++L+ + +G
Sbjct: 508 LFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
Query: 207 KMGLALHFFEKMAEKNVVS-----WNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTM 260
+ FE M ++ + MV + +G L +A + + + P+A W +
Sbjct: 567 LVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGAL 626
Query: 261 LCGFARHGKI----TEARRLFDSMP 281
L HG + + LF+ P
Sbjct: 627 LSACRVHGNVDLGKIASEHLFEVEP 651
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
Q LH ++ S I ++ +S L+ +Y G V A F I+ D+ +WN +ISGY
Sbjct: 68 QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127
Query: 552 ALNGYAIEAFKAFKQ-MLSEEVVPDQVTFIGMLSAC 586
G + E + F MLS + PD TF +L AC
Sbjct: 128 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 316 bits (809), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 222/779 (28%), Positives = 380/779 (48%), Gaps = 83/779 (10%)
Query: 59 FSNTIHKNLVTY---------NSMISVFAKNGKISDARQLFDKMSQ-------RNLVSWN 102
+ TIH ++V S+++++ K G + A Q+FD SQ R++ WN
Sbjct: 78 YGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWN 137
Query: 103 TMIAGYLHNSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKL--EKARELLE-LV 155
+MI GY +E F M D FS +++++ ++G E+ +++ ++
Sbjct: 138 SMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFML 197
Query: 156 PDKLDTACW--NAVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNG--KMGL 210
+ LDT + A+I Y K G DA +VF + K ++V +N M+ G+ +G + L
Sbjct: 198 RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSL 257
Query: 211 ALHFFEKMAEKNVVSWNLM--VSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGF 264
L+ K +VS + + S + RQ+ + + + ++L +
Sbjct: 258 DLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWT 320
++ G + EA +F + K + WNAM+AAYA++ A+ LF M K D + +
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAA----ETALMSGLIQTGRVDEASKMFNQLSTR 376
+I+ +G + + V+ ++ + I + E+AL++ + G +A +F + +
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----------------------------- 407
D + W S+I+G C++G+ EAL +F M
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 408 ------------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL 455
N +++I Y++ G + A +F +M N+V+WNS+I+ + +N+L
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNL 557
Query: 456 YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
++ LM +G PD + G LH Y L+ G +D + NA
Sbjct: 558 PELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNA 617
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
LI MY KCG + AE +F ++ LI+WN +I GY +G I A F +M PD
Sbjct: 618 LIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPD 677
Query: 576 QVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
VTF+ ++SAC+H+G +G ++F+ M +D+ IEP EHY+ +VDLLGR G LEEA++ +
Sbjct: 678 DVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFI 737
Query: 636 RGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
+ M ++A++ +W LL A R H N+E+G +A +L +EP S Y+ L N++ EAG
Sbjct: 738 KAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKN 797
Query: 696 EVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDK 754
E +L LM++K K PGCSWIEV ++ F S S I +LN + ++M D+
Sbjct: 798 EAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 39/322 (12%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
+VF + I K G E A++VF++ +N+V +NSMIS +++N + LF+ M
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 95 QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL 154
+ + + I L A+ T KGK L
Sbjct: 570 SQGIFPDSVSITSVL----------------------VAISSTASLLKGKSLHGYTLRLG 607
Query: 155 VPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
+P DT NA+I Y K G AE +F M K L+++N M+ GY +G AL
Sbjct: 608 IPS--DTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSL 665
Query: 215 FEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFA 265
F++M + + V++ ++S +SG + + +FE + PN + M+
Sbjct: 666 FDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLG 725
Query: 266 RHGKITEARRLFDSMPCKNVVS-WNAMIAA----YAQDLQIDEAVKLFIKMPHKDGVSWT 320
R G + EA +MP + S W +++A + +L I A KL ++M + G ++
Sbjct: 726 RAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKL-LRMEPERGSTYV 784
Query: 321 TIINGYIRVGKLDEAREVYNQM 342
+IN Y+ G +EA ++ M
Sbjct: 785 QLINLYMEAGLKNEAAKLLGLM 806
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 122/315 (38%), Gaps = 51/315 (16%)
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS---TFXXXXXXXXXXXXXQVGNQLH 498
S NS I +Q Y AL + +G P + TF G +H
Sbjct: 26 SINSGIRALIQKGEYLQALH--LYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-------TAIECVDLISWNSLISGY 551
++ G+ D F++ +L+ MY KCG ++ A QVF + + D+ WNS+I GY
Sbjct: 84 GSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG--LANQGLDLFKCMVEDFAIE 609
E F++ML V PD + ++S G +G + M+ + +++
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLD 202
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSL------------------- 650
+ + L+D+ + G +A+ V ++ K+N LW +
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML 262
Query: 651 ----------------LGACRVHKNLEIGEFAAMRLSELEPHNASNYIT-LSNMHAEAGR 693
LGAC +N G + ++ HN T L +M+++ G
Sbjct: 263 AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322
Query: 694 WEEVERLRVLMRDKR 708
E E + + DKR
Sbjct: 323 VGEAETVFSCVVDKR 337
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 16/213 (7%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
+ L +G H+ KN I K G + A +F HK+L+T+N MI + +G
Sbjct: 602 YTLRLGIPSDTHL--KNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDC 659
Query: 84 SDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMP-----ERDNFSWAL 134
A LFD+M + + V++ ++I+ H+ VEE +F+ M E + +A
Sbjct: 660 ITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYAN 719
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFS----DAEKVFNLMPVK 190
M+ R G LE+A ++ +P + D++ W +++ AEK+ + P +
Sbjct: 720 MVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPER 779
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
+Y ++ Y + G A M EK +
Sbjct: 780 G-STYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/577 (30%), Positives = 307/577 (53%), Gaps = 74/577 (12%)
Query: 211 ALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFAR 266
A+ F+ + E N++ WN M G S D SA +L+ + + PN+ ++ +L A+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGY 326
E +++ + L++ + L++ T++I+ Y
Sbjct: 147 SKAFKEGQQI------------------HGHVLKLGCDLDLYVH---------TSLISMY 179
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIA 386
++ G+L++A +V+++ P +D+ + TAL+ G G ++ A K+F+++ +D + WN+MI+
Sbjct: 180 VQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMIS 239
Query: 387 GFCQSGRMDEALDLFRQMPKKNSVS--------------------------W-------- 412
G+ ++G EAL+LF+ M K N W
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS 299
Query: 413 -----NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
N +I Y++ G++++A +F+ + ++++SWN+LI G+ +LY +AL M
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK--SGYINDLFVSNALIAMYAKCGR 525
R G+ P+ T +G +H YI K G N + +LI MYAKCG
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+E+A QVF +I L SWN++I G+A++G A +F F +M + PD +TF+G+LSA
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CSH+G+ + G +F+ M +D+ + P EHY C++DLLG G +EA ++ M+++ +
Sbjct: 480 CSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV 539
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W SLL AC++H N+E+GE A L ++EP N +Y+ LSN++A AGRW EV + R L+
Sbjct: 540 IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLN 599
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
DK K+PGCS IE+ + + F+ D + P +I
Sbjct: 600 DKGMKKVPGCSSIEIDSVVHEFIIGD--KFHPRNREI 634
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 195/414 (47%), Gaps = 64/414 (15%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCY 139
A +F + + NL+ WNTM G+ +S A KL+ M P F + L +C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK-SCA 145
Query: 140 TRKGKLEKAR---ELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
K E + +L+L D LD ++I+ Y + G+ DA KVF+ P +D+VSY
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCD-LDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI----PNP 252
+++ GY G + A F+++ K+VVSWN M+SG+ +G+ A +LF+ + P
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 253 NAVSWVTMLCGFARHGKITEARRLF----DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF 308
+ + VT++ A+ G I R++ D N+ NA+I Y++ +++ A LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 309 IKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM-----------------PCKDIAA-- 349
++P+KD +SW T+I GY + EA ++ +M C + A
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 350 ----------------------ETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
T+L+ + G ++ A ++FN + + WN+MI G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 388 FCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
F GR D + DLF +M K + +++ ++S + +G +D +IF+ M +
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 162/314 (51%), Gaps = 21/314 (6%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
G++E+A +VF + H+++V+Y ++I +A G I +A++LFD++ +++VSWN MI+GY
Sbjct: 183 GRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYA 242
Query: 110 HNSMVEEASKLF-DVMP---ERDNFSWALMITCYTRKGKLEKARELLELVPDK---LDTA 162
+EA +LF D+M D + +++ + G +E R++ + D +
Sbjct: 243 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLK 302
Query: 163 CWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-- 220
NA+I Y+K G+ A +F +P KD++S+N+++ GYT AL F++M
Sbjct: 303 IVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 221 --KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCG-FARHGKITE 272
N V+ ++ + G + R + I NA S T L +A+ G I
Sbjct: 363 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 422
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIR 328
A ++F+S+ K++ SWNAMI +A + D + LF +M D +++ +++
Sbjct: 423 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 482
Query: 329 VGKLDEAREVYNQM 342
G LD R ++ M
Sbjct: 483 SGMLDLGRHIFRTM 496
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/563 (33%), Positives = 292/563 (51%), Gaps = 33/563 (5%)
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKI-------PNPNAVSWVTMLCGFARHGKITEAR 274
N+ SWN+ + GF S + + L++++ P+ ++ + K+
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLF-------KVCADL 169
Query: 275 RL--FDSMPCKNVVSW---------NAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTII 323
RL M +V+ NA I +A ++ A K+F + P +D VSW +I
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT-------GRVDEASKMFNQLSTR 376
NGY ++G+ ++A VY M + + + M GL+ + R E + + R
Sbjct: 230 NGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 377 DTICW-NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
TI N+++ F + G + EA +F + K+ VSW TMISGYA+ G +D + +F M
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 436 EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGN 495
EE+++V WN++I G +Q DAL M KPD+ T VG
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
+H YI K ++ + +L+ MYAKCG + A VF I+ + +++ ++I G AL+G
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHG 469
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHY 615
A A F +M+ + PD++TFIG+LSAC H G+ G D F M F + P +HY
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHY 529
Query: 616 SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEP 675
S +VDLLGR G LEEA ++ M ++A+A +WG+LL CR+H N+E+GE AA +L EL+P
Sbjct: 530 SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDP 589
Query: 676 HNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRL 735
++ Y+ L M+ EA WE+ +R R +M ++ K+PGCS IEV + F+ D R
Sbjct: 590 SDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRP 649
Query: 736 RPETIQIILNAISAHMRDKFNVF 758
E I L+ + HMR +V
Sbjct: 650 ESEKIYDRLHCLGRHMRSSLSVL 672
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 195/395 (49%), Gaps = 27/395 (6%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER- 127
+N+ I +FA G + +AR++FD+ R+LVSWN +I GY E+A ++ +M
Sbjct: 193 VHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEG 252
Query: 128 ---DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAE 181
D+ + +++ + G L + +E E V + ++ NA++ ++K G +A
Sbjct: 253 VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEAR 312
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
++F+ + + +VS+ +M++GY + G + ++ F+ M EK+VV WN M+ G V +
Sbjct: 313 RIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQD 372
Query: 242 ARQLFEKI----PNPNAVSWVTMLCGFARHGKITEA----RRLFDSMPCKNVVSWNAMIA 293
A LF+++ P+ ++ + L ++ G + R + NV +++
Sbjct: 373 ALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVD 432
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE--- 350
YA+ I EA+ +F + ++ +++T II G G A +N+M IA +
Sbjct: 433 MYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEIT 492
Query: 351 -TALMS-----GLIQTGRVDEASKMFNQLSTRDTI-CWNSMIAGFCQSGRMDEALDLFRQ 403
L+S G+IQTGR D S+M ++ + + ++ M+ ++G ++EA L
Sbjct: 493 FIGLLSACCHGGMIQTGR-DYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 404 MP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
MP + ++ W ++ G G ++ E + + E
Sbjct: 552 MPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLE 586
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 186/419 (44%), Gaps = 75/419 (17%)
Query: 88 QLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM-------PERDNFSWALMI-TCY 139
++ + N+ SWN I G+ + +E+ L+ M D+F++ ++ C
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 140 TRK---------GKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK 190
+ G + K R LELV + NA I +A G +A KVF+ PV+
Sbjct: 168 DLRLSSLGHMILGHVLKLR--LELV-----SHVHNASIHMFASCGDMENARKVFDESPVR 220
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS-------------- 236
DLVS+N ++ GY + G+ A++ ++ M + V ++ + G V+S
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 237 -------------------------GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKIT 271
GD+ AR++F+ + VSW TM+ G+AR G +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYI 327
+R+LFD M K+VV WNAMI Q + +A+ LF +M D ++ ++
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 328 RVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNS 383
++G LD ++ + ++ AL + L+ + G + EA +F+ + TR+++ + +
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTA 460
Query: 384 MIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+I G G A+ F +M + +++ ++S G + + + F M+ R
Sbjct: 461 IIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 131/262 (50%), Gaps = 17/262 (6%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G + EA R+F N + +V++ +MIS +A+ G + +R+LFD M ++++V WN MI G
Sbjct: 304 KCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGG 363
Query: 108 YLHNSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKA---RELLELVPDKLD 160
+ ++A LF M + D + ++ ++ G L+ +E L+
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLN 423
Query: 161 TACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE 220
A +++ YAK G S+A VF+ + ++ ++Y +++ G +G A+ +F +M +
Sbjct: 424 VALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMID 483
Query: 221 KNV----VSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKIT 271
+ +++ ++S + G + + R F ++ NP + M+ R G +
Sbjct: 484 AGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLE 543
Query: 272 EARRLFDSMPCK-NVVSWNAMI 292
EA RL +SMP + + W A++
Sbjct: 544 EADRLMESMPMEADAAVWGALL 565
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 420 AQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG---KKPDQS 476
+++ +D + I + +E NI SWN I GF ++ ++ M R G +PD
Sbjct: 98 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF 157
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T+ +G+ + ++LK V NA I M+A CG +E+A +VF
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
DL+SWN LI+GY G A +A +K M SE V PD VT IG++S+CS G N+G
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ ++ V++ + + L+D+ + G + EA + ++ +
Sbjct: 278 EFYE-YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT 322
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 222/780 (28%), Positives = 359/780 (46%), Gaps = 112/780 (14%)
Query: 71 NSMISVFA-------KNGKISDARQLFDKMSQRNLVSWNTMIAG-----YLHNSMVEEAS 118
NS + FA K +S RQL ++ + +AG Y +++A
Sbjct: 77 NSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAE 136
Query: 119 KLFDVMPERDNFSWALMITCYTRKGKLEKAREL-----LELVPDKLDTACWNAVIAGYAK 173
K+FD MP+R F+W MI Y G+ A L +E VP L + + A++ AK
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVP--LGLSSFPALLKACAK 194
Query: 174 KGQFSDAEKVFNLMPVKDLVS----YNSMLAGYTQNGKMGLALHFFEKMAEK-NVVSWNL 228
++ +L+ S N++++ Y +N + A F+ EK + V WN
Sbjct: 195 LRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 254
Query: 229 MVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCG--------------------- 263
++S + SG +LF ++ P PN+ + V+ L
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS 314
Query: 264 ---------------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF 308
+ R GK+ +A R+ M +VV+WN++I Y Q+L EA++ F
Sbjct: 315 THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF 374
Query: 309 ---IKMPHK-DGVSWTTIINGYIRVGKLDEAREVYNQMPC----KDIAAETALMSGLIQT 360
I HK D VS T+II R+ L E++ + ++ L+ +
Sbjct: 375 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 434
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK------------- 407
+ F ++ +D I W ++IAG+ Q+ EAL+LFR + KK
Sbjct: 435 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 494
Query: 408 -------------------------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
++V N ++ Y + M A +F++++ +++VS
Sbjct: 495 RASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVS 554
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
W S+I+ N +A++ M G D G ++H Y+L
Sbjct: 555 WTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLL 614
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
+ G+ + ++ A++ MYA CG ++SA+ VF IE L+ + S+I+ Y ++G A +
Sbjct: 615 RKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVE 674
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
F +M E V PD ++F+ +L ACSHAGL ++G K M ++ +EP EHY CLVD+L
Sbjct: 675 LFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 734
Query: 623 GRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYI 682
GR + EAF V+ M + A +W +LL ACR H EIGE AA RL ELEP N N +
Sbjct: 735 GRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLV 794
Query: 683 TLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
+SN+ AE GRW +VE++R M+ K PGCSWIE+ ++ F + D + PE+ +I
Sbjct: 795 LVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARD--KSHPESKEI 852
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 197/424 (46%), Gaps = 27/424 (6%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
KLGK A + S+T L N++I+++ + GK+ A ++ +M+ ++V+WN++I
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 107 GYLHNSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKARELLELVPDK---L 159
GY+ N M +EA + F M + D S +I R L EL V
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+ N +I Y+K + F M KDL+S+ +++AGY QN AL F +A
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP-------NAVSWVTMLCGFARHGKITE 272
+K + +++ + + + + + ++I + V ++ + + +
Sbjct: 480 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGY 539
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIR 328
A R+F+S+ K+VVSW +MI++ A + EAV+LF +M D V+ I++
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQLSTRDTICWNSM 384
+ L++ RE++ + K E ++ ++ G + A +F+++ + + + SM
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 659
Query: 385 IAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAME-ERN 439
I + G A++LF +M +N +S+ ++ + AG +D + ME E
Sbjct: 660 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 719
Query: 440 IVSW 443
+ W
Sbjct: 720 LEPW 723
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 209/709 (29%), Positives = 347/709 (48%), Gaps = 65/709 (9%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM--- 124
V +++I VF+KN + DA ++F N+ WNT+IAG L N LF M
Sbjct: 186 VVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 125 ---PERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAE 181
P+ +S L K + K + + D A++ YAK G ++A
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAM 305
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
+VF+ +P +VS+ ML+GYT++ AL F++M V N V+ +++ S
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 242 ----ARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARRLF---DSMPCKNVVSWNA 290
A Q+ F+ ++ ++ +++ G I + ++F D + +N+V N
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NV 423
Query: 291 MIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIIN--GYIRVGKLDEAREVYNQMPC 344
MI +++Q + +A++LF +M + D S ++++ + +GK + + +
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGL-V 482
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
D+ ++L + + G ++E+ K+F + +D CW SMI+GF + G + EA+ LF +M
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 405 -------------------------PKKNSVSWNTMISG--------------YAQAGQM 425
P+ + T+ +G Y++ G +
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL 602
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
A ++ + E + VS +SLI+G+ Q+ L D M G D
Sbjct: 603 KLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAA 662
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWN 545
+G Q+H YI K G + V ++L+ MY+K G ++ + F+ I DLI+W
Sbjct: 663 ALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWT 722
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+LI+ YA +G A EA + + M + PD+VTF+G+LSACSH GL + MV+D
Sbjct: 723 ALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKD 782
Query: 606 FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEF 665
+ IEP HY C+VD LGR GRL EA + + M +K +A +WG+LL AC++H +E+G+
Sbjct: 783 YGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKV 842
Query: 666 AAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
AA + ELEP +A YI+LSN+ AE G W+EVE R LM+ K PG
Sbjct: 843 AAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 891
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 239/518 (46%), Gaps = 85/518 (16%)
Query: 138 CYTRKGKLEKARELLE-LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
C R K+ +A L L+P D ++++ Y+ G +DA K+F+ +P D+VS N
Sbjct: 62 CNLRTTKILQAHLLRRYLLP--FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCN 119
Query: 197 SMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQ--LFEKIP 250
M++GY Q+ +L FF KM E N +S+ ++S SA Q LF ++
Sbjct: 120 IMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISA-------CSALQAPLFSELV 172
Query: 251 NPNAVSW---------VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQI 301
+ + ++ F+++ + +A ++F NV WN +IA ++
Sbjct: 173 CCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNY 232
Query: 302 DEAVKLFIKM----PHKDGVSWTTIINGY-----IRVGKLDEAREVYNQMPCKDIAAETA 352
LF +M D ++++++ +R GK+ +AR + + +D+ TA
Sbjct: 233 GAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCTA 290
Query: 353 LMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSW 412
++ + G + EA ++F+++ + W M++G+ +S AL++F++M + + V
Sbjct: 291 IVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM-RHSGVEI 349
Query: 413 N----------------------------------------TMISGYAQAGQMDSAENIF 432
N +IS Y+++G +D +E +F
Sbjct: 350 NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVF 409
Query: 433 QAMEE---RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
+ +++ +NIV N +IT F Q+ A++ M +EG + D+ +
Sbjct: 410 EDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS---VCSLLSVLD 464
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
+G Q+H Y LKSG + DL V ++L +Y+KCG +E + ++F I D W S+IS
Sbjct: 465 CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMIS 524
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
G+ GY EA F +ML + PD+ T +L+ CS
Sbjct: 525 GFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCS 562
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 220/494 (44%), Gaps = 62/494 (12%)
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS 318
++L ++ G + +A +LFD++P +VVS N MI+ Y Q +E+++ F KM H G
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM-HFLGFE 147
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCKDI---------AAETALMSGLIQTGRVDEASKM 369
I G + +++++ C E+AL+ + R ++A K+
Sbjct: 148 ANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKV 207
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISG------- 418
F + + CWN++IAG ++ DLF +M K +S +++++++
Sbjct: 208 FRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKL 267
Query: 419 ---------------------------YAQAGQMDSAENIFQAMEERNIVSWNSLITGFL 451
YA+ G M A +F + ++VSW +++G+
Sbjct: 268 RFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYT 327
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
+++ F AL+ M G + + T +Q+H ++ KSG+ D
Sbjct: 328 KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS 387
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIECVDLISW-NSLISGYALNGYAIEAFKAFKQMLSE 570
V+ ALI+MY+K G ++ +EQVF ++ + + N +I+ ++ + +A + F +ML E
Sbjct: 388 VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 571 EVVPDQVTFIGMLSA--CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
+ D+ + +LS C + G G L +V D + S L L + G L
Sbjct: 448 GLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG------SSLFTLYSKCGSL 501
Query: 629 EEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFAAMRLSELEPHNAS--NYITL 684
EE++ + +G+ K NA W S++ + L IG F+ M P ++ +T+
Sbjct: 502 EESYKLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 685 SNMHAEAGRWEEVE 698
+ H R +E+
Sbjct: 561 CSSHPSLPRGKEIH 574
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 219/488 (44%), Gaps = 53/488 (10%)
Query: 32 GGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFD 91
G + VF + K G + EA+ VFS + ++V++ M+S + K+ A ++F
Sbjct: 281 GAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFK 340
Query: 92 KMSQR----NLVSWNTMIAGYLHNSMVEEASK----LFDVMPERDNFSWALMITCYTRKG 143
+M N + ++I+ SMV EAS+ +F D+ A +I+ Y++ G
Sbjct: 341 EMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSG 400
Query: 144 KLEKARELLELVPDKLDTACWNAVIAGYA----------------KKGQFSDAEKVFNLM 187
++ + ++ E + D N +I ++ ++G +D V +L+
Sbjct: 401 DIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL 460
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
V D ++ + GYT K GL L ++ + + + + G L + +LF+
Sbjct: 461 SVLDCLNLGKQVHGYTL--KSGLVL---------DLTVGSSLFTLYSKCGSLEESYKLFQ 509
Query: 248 KIPNPNAVSWVTMLCGFARHGKITEARRLFDSM------PCKNVVSWNAMIAAYAQDLQI 301
IP + W +M+ GF +G + EA LF M P ++ ++ + + L
Sbjct: 510 GIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPR 569
Query: 302 DEAVKLFIKMPHKD-GVSW-TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ 359
+ + + D G+ + ++N Y + G L AR+VY+++P D + ++L+SG Q
Sbjct: 570 GKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQ 629
Query: 360 TGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPK-----KNSV 410
G + + +F + T D+ +S++ S + + K + SV
Sbjct: 630 HGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSV 689
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
+++++ Y++ G +D F + ++++W +LI + Q+ +AL+ LM +G
Sbjct: 690 G-SSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Query: 471 KKPDQSTF 478
KPD+ TF
Sbjct: 749 FKPDKVTF 756
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 167/352 (47%), Gaps = 35/352 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
+L +S+ ++++K G + ++ +LF + ++ W +MI+G+ + EA LF M
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML 543
Query: 125 ---PERDNFSWALMITCYTRKGKLEKAREL----LELVPDK-LDTACWNAVIAGYAKKGQ 176
D + A ++T + L + +E+ L DK +D +A++ Y+K G
Sbjct: 544 DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG--SALVNMYSKCGS 601
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS 236
A +V++ +P D VS +S+++GY+Q+G + F M + +S + +
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Query: 237 GDLSSARQLFEKI----------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
LS L ++ P+ S ++L +++ G I + + F + +++
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGS--SLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQM 342
+W A+IA+YAQ + +EA++++ M K D V++ +++ G ++E+ N M
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Query: 343 PCKDIAAE------TALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAG 387
KD E ++ L ++GR+ EA N + + D + W +++A
Sbjct: 780 -VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 138/300 (46%), Gaps = 20/300 (6%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
I K + ++++++++K G + ARQ++D++ + + VS +++I+GY + ++++ LF
Sbjct: 582 IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFR 641
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL-------DTACWNAVIAGYAKKG 175
M + I+ + L L V + + + ++++ Y+K G
Sbjct: 642 DMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFG 701
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
D K F+ + DL+++ +++A Y Q+GK AL + M EK + G ++
Sbjct: 702 SIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
Query: 236 S---GDL--SSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NV 285
+ G L S L + + P +V M+ R G++ EA ++M K +
Sbjct: 762 ACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDA 821
Query: 286 VSWNAMIAAYAQDLQID---EAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
+ W ++AA +++ A K I++ D ++ ++ N VG+ DE E M
Sbjct: 822 LVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLM 881
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNT 103
K G +++ + FS +L+ + ++I+ +A++GK ++A Q+++ M ++ V++
Sbjct: 699 KFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVG 758
Query: 104 MIAGYLHNSMVEEA-----SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
+++ H +VEE+ S + D E +N + M+ R G+L +A + + K
Sbjct: 759 VLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIK 818
Query: 159 LDTACWNAVIAGYAKKGQFS----DAEKVFNLMP 188
D W ++A G+ A+K L P
Sbjct: 819 PDALVWGTLLAACKIHGEVELGKVAAKKAIELEP 852
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 7/150 (4%)
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
D+F++ +L++ Y+ G + A ++F I D++S N +ISGY + E+ + F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 569 SEEVVPDQVTFIGMLSACS--HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
+++++ ++SACS A L ++ + + F E + S L+D+ +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE---SALIDVFSKNL 199
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLL-GACR 655
R E+A+ V R + AN W +++ GA R
Sbjct: 200 RFEDAYKVFRD-SLSANVYCWNTIIAGALR 228
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 228/823 (27%), Positives = 389/823 (47%), Gaps = 79/823 (9%)
Query: 10 TRGENHKIKMTSMKHKLTIGSIGGKHVF----NKNQQIIHLGKLGKVEEAVRVFSNTIHK 65
+R HK + ++ + G ++ F Q+I +G L + +F +
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 66 NLVTYNSMISVFAKN-GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+ V N +IS++ K G + A F + +N VSWN++I+ Y A ++F M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 125 ------PERDNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKG 175
P F + C + + +++ + D + +++ +AK G
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF---EKMAEKNVVSWNLMVSG 232
S A KVFN M ++ V+ N ++ G + A F M + + S+ +++S
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 233 F-----VNSGDLSSARQLFEKIPNPNAVSWVT-----MLCGFARHGKITEARRLFDSMPC 282
F L R++ + V ++ ++ +A+ G I +ARR+F M
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWT-TIINGYIRVGKLDEAR----- 336
K+ VSWN+MI Q+ EAV+ + M D + + T+I+ L A+
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 337 --EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR- 393
E +++ ALM+ +TG ++E K+F+ + D + WNS+I +S R
Sbjct: 438 HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERS 497
Query: 394 MDEALDLF----RQMPKKNSVSW-----------------------------------NT 414
+ EA+ F R K N +++ N
Sbjct: 498 LPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENA 557
Query: 415 MISGYAQAGQMDSAENIFQAM-EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
+I+ Y + G+MD E IF M E R+ V+WNS+I+G++ N L AL + M + G++
Sbjct: 558 LIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL 617
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
D + + G ++H +++ +D+ V +AL+ MY+KCGR++ A + F
Sbjct: 618 DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQM-LSEEVVPDQVTFIGMLSACSHAGLA 592
+ + SWNS+ISGYA +G EA K F+ M L + PD VTF+G+LSACSHAGL
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLG 652
+G F+ M + + + P EH+SC+ D+LGR G L++ + + M +K N +W ++LG
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLG 797
Query: 653 A-CRVH-KNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAG 710
A CR + + E+G+ AA L +LEP NA NY+ L NM+A GRWE++ + R M+D
Sbjct: 798 ACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVK 857
Query: 711 KLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
K G SW+ +++ + F++ D + I L ++ MRD
Sbjct: 858 KEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRD 900
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 174/717 (24%), Positives = 311/717 (43%), Gaps = 80/717 (11%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R++ N + K++ N++I+ + + G AR++FD+M RN VSW +++GY N +E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 117 ASKLFDVMPERDNFSWALMITCYTRK-------GKL--EKARELLELVPDKLDTACWNAV 167
A M + FS R G L + L+ + +D N +
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 168 IAGYAKK-GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSW 226
I+ Y K G A F + VK+ VS+NS+++ Y+Q G A F M
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 227 NLMVSGFVNSG------DLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRL 276
V + D+ Q+ I ++ + ++ FA+ G ++ AR++
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV---SWTTIINGYI------ 327
F+ M +N V+ N ++ + +EA KLF+ M V S+ +++ +
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAE 325
Query: 328 RVGKLDEAREVYNQMPCKD-----IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
VG L + REV+ + + L++ + G + +A ++F ++ +D++ WN
Sbjct: 326 EVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWN 384
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKN----------------SVSW-------------- 412
SMI G Q+G EA++ ++ M + + S+ W
Sbjct: 385 SMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 413 ---------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF-DALKS 462
N +++ YA+ G ++ IF +M E + VSWNS+I ++ +A+
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAK 522
+ R G+K ++ TF ++G Q+H LK+ ++ NALIA Y K
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGK 564
Query: 523 CGRVESAEQVFTAI-ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
CG ++ E++F+ + E D ++WNS+ISGY N +A ML D +
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 624
Query: 582 MLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
+LSA + +G+++ C V +E S LVD+ + GRL+ A M V+
Sbjct: 625 VLSAFASVATLERGMEVHACSVRA-CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Query: 642 ANAGLWGSLLGACRVHKNLE--IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
N+ W S++ H E + F M+L P + ++ + + + AG EE
Sbjct: 684 -NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
H + K+ D+++ N LI Y + G SA +VF + + +SW ++SGY+ NG
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
EA + M+ E + +Q F+ +L AC G
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 312 bits (799), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 221/782 (28%), Positives = 377/782 (48%), Gaps = 81/782 (10%)
Query: 41 QQIIHLGKLGKVEEAVRVFSNTIHKNLVT----YNSMISVFAKNGKISDARQLFDKMSQ- 95
++ L K G+++EA+ + + +NL Y ++ +S +Q+ ++ +
Sbjct: 40 HRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKN 99
Query: 96 -----RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAR- 149
RN ++ Y +E A LF + R+ FSWA +I R G E A
Sbjct: 100 GDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALM 159
Query: 150 ---ELLE--LVPDKLDT-----AC----WNAVIAG-----------------------YA 172
E+LE + PD AC W+ G Y
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYG 219
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVS- 231
K G DA KVF+ +P ++ V++N+++ GY QNGK A+ F M ++ V + VS
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 232 --------GFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
G V G S A + + N + ++L + + G I A +FD M K
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVY 339
+VV+WN +I+ Y Q +++A+ + M + D V+ T+++ R L +EV
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV- 397
Query: 340 NQMPC------KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
Q C DI + +M + G + +A K+F+ +D I WN+++A + +SG
Sbjct: 398 -QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 394 MDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNS 445
EAL LF M N ++WN +I + GQ+D A+++F M+ N++SW +
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
++ G +QN +A+ L M G +P+ + +G +H YI+++
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 506 YINDLF-VSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAF 564
+ L + +L+ MYAKCG + AE+VF + +L N++IS YAL G EA +
Sbjct: 577 QHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALY 636
Query: 565 KQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGR 624
+ + + PD +T +LSAC+HAG NQ +++F +V +++P EHY +VDLL
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLAS 696
Query: 625 MGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITL 684
G E+A ++ M K +A + SL+ +C + E+ ++ + +L E EP N+ NY+T+
Sbjct: 697 AGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTI 756
Query: 685 SNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQ--IQCFLSDDSGRLRPETIQI 742
SN +A G W+EV ++R +M+ K K PGCSWI++ + + F+++D R IQ+
Sbjct: 757 SNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQM 816
Query: 743 IL 744
+L
Sbjct: 817 ML 818
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 311 bits (798), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 214/741 (28%), Positives = 356/741 (48%), Gaps = 77/741 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
+++ ++ G +S +R++F++M RN+VSW +++ GY EE ++ M
Sbjct: 98 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVG 157
Query: 128 -DNFSWALMIT-CYTRKGKLEKARELLELVPDKLDT--ACWNAVIAGYAKKGQFSDAEKV 183
+ S +L+I+ C K + + + ++V L++ A N++I+ G A +
Sbjct: 158 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 217
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------AEKNVVSWNLMVSGFVNSG 237
F+ M +D +S+NS+ A Y QNG + + F M VS L V G V+
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 277
Query: 238 DLSSA-RQLFEKIPNPNAVSWV-TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
L K+ + V T+L +A G+ EA +F MP K+++SWN+++A++
Sbjct: 278 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 337
Query: 296 AQDLQIDEAVKLFIKM-PHKDGVSWTTIIN-------------GYIRVGKLDEAREVYNQ 341
D + +A+ L M V++ T + G I G + + YNQ
Sbjct: 338 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 397
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ AL+S + G + E+ ++ Q+ RD + WN++I G+ + D+AL F
Sbjct: 398 I------IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 451
Query: 402 RQMPKKNSVS----------------------------------------WNTMISGYAQ 421
+ M + S N++I+ YA+
Sbjct: 452 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 511
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
G + S++++F ++ RNI++WN+++ + + LK + M G DQ +F
Sbjct: 512 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 571
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL 541
+ G QLH +K G+ +D F+ NA MY+KCG + ++ L
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 631
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
SWN LIS +GY E F +ML + P VTF+ +L+ACSH GL ++GL +
Sbjct: 632 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 691
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE 661
+ DF +EP EH C++DLLGR GRL EA + M +K N +W SLL +C++H NL+
Sbjct: 692 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 751
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
G AA LS+LEP + S Y+ SNM A GRWE+VE +R M K K CSW++++
Sbjct: 752 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 811
Query: 722 NQIQCFLSDDSGRLRPETIQI 742
+++ F D R P+T++I
Sbjct: 812 DKVSSFGIGD--RTHPQTMEI 830
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 187/724 (25%), Positives = 316/724 (43%), Gaps = 103/724 (14%)
Query: 76 VFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFS 131
++ K G++ AR LFD M RN VSWNTM++G + + E + F D+ + +F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 132 WALMITCYTRKGKL-EKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLM 187
A ++T R G + + ++ V D A++ Y G S + KVF M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSAR 243
P +++VS+ S++ GY+ G+ + ++ M + V S +L++S D S R
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 244 QLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
Q+ ++ S + +++ G + A +FD M ++ +SWN++ AAYAQ+
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 300 QIDEAVKLFIKMPH-KDGVSWTTIINGYIRVGKLDE---AREVYNQMPCKDIAAETALMS 355
I+E+ ++F M D V+ TT+ +G +D R ++ + + + +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 356 GLIQ----TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK---- 407
L++ GR EA+ +F Q+ T+D I WNS++A F GR +AL L M
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 408 -----------------------------------NSVSWNTMISGYAQAGQMDSAENIF 432
N + N ++S Y + G+M + +
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX-XXXXXXX 491
M R++V+WN+LI G+ ++ AL + M EG + T
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
+ G LH YI+ +G+ +D V N+LI MYAKCG + S++ +F ++ ++I+WN++++
Sbjct: 481 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 540
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV------ED 605
A +G+ E K +M S V DQ +F LSA + + +G L V +
Sbjct: 541 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 600
Query: 606 FAIEPLAEHYS------------------------CLVDLLGRMGRLEE---AFNVVRGM 638
F A+ YS L+ LGR G EE F+ + M
Sbjct: 601 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 660
Query: 639 DVKANAGLWGSLLGACR----VHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
+K + SLL AC V K L + A R LEP + I + ++ +GR
Sbjct: 661 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA-RDFGLEP-AIEHCICVIDLLGRSGRL 718
Query: 695 EEVE 698
E E
Sbjct: 719 AEAE 722
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 169/391 (43%), Gaps = 21/391 (5%)
Query: 326 YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS----TRDTICW 381
Y + G++ AR +++ MP ++ + +MSG+++ G E + F ++ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 382 NSMIAGFCQSGRM-DEALDLFRQMPKKNSVS----WNTMISGYAQAGQMDSAENIFQAME 436
S++ +SG M E + + + K +S ++ Y G + + +F+ M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 437 ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQ 496
+RN+VSW SL+ G+ + + M EG ++++ +G Q
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
+ ++KSG + L V N+LI+M G V+ A +F + D ISWNS+ + YA NG+
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
E+F+ F M + T +LS H G + ++ +
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG-----IHGLVVKMGFDSVV 296
Query: 617 CLVDLLGRM----GRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSE 672
C+ + L RM GR EA V + M K + W SL+ A V+ + + S
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM-ASFVNDGRSLDALGLL-CSM 353
Query: 673 LEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
+ + NY+T ++ A + E+ R+L
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 117/257 (45%), Gaps = 23/257 (8%)
Query: 39 KNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
KN I K G + + +F+ ++N++T+N+M++ A +G + +L KM +
Sbjct: 502 KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 561
Query: 99 ----VSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARE 150
S++ ++ +++EE +L + E D+F + Y++ G++ E
Sbjct: 562 SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG---E 618
Query: 151 LLELVPDKLDTA--CWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQ 204
+++++P ++ + WN +I+ + G F + F+ M + V++ S+L +
Sbjct: 619 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSH 678
Query: 205 NGKMGLALHFFEKMA-----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWV 258
G + L +++ +A E + ++ SG L+ A K+P PN + W
Sbjct: 679 GGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWR 738
Query: 259 TMLCGFARHGKITEARR 275
++L HG + R+
Sbjct: 739 SLLASCKIHGNLDRGRK 755
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 311 bits (798), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 214/741 (28%), Positives = 356/741 (48%), Gaps = 77/741 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
+++ ++ G +S +R++F++M RN+VSW +++ GY EE ++ M
Sbjct: 81 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVG 140
Query: 128 -DNFSWALMIT-CYTRKGKLEKARELLELVPDKLDT--ACWNAVIAGYAKKGQFSDAEKV 183
+ S +L+I+ C K + + + ++V L++ A N++I+ G A +
Sbjct: 141 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 200
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------AEKNVVSWNLMVSGFVNSG 237
F+ M +D +S+NS+ A Y QNG + + F M VS L V G V+
Sbjct: 201 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 260
Query: 238 DLSSA-RQLFEKIPNPNAVSWV-TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
L K+ + V T+L +A G+ EA +F MP K+++SWN+++A++
Sbjct: 261 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 320
Query: 296 AQDLQIDEAVKLFIKM-PHKDGVSWTTIIN-------------GYIRVGKLDEAREVYNQ 341
D + +A+ L M V++ T + G I G + + YNQ
Sbjct: 321 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 380
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ AL+S + G + E+ ++ Q+ RD + WN++I G+ + D+AL F
Sbjct: 381 I------IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 434
Query: 402 RQMPKKNSVS----------------------------------------WNTMISGYAQ 421
+ M + S N++I+ YA+
Sbjct: 435 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 494
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
G + S++++F ++ RNI++WN+++ + + LK + M G DQ +F
Sbjct: 495 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 554
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL 541
+ G QLH +K G+ +D F+ NA MY+KCG + ++ L
Sbjct: 555 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 614
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
SWN LIS +GY E F +ML + P VTF+ +L+ACSH GL ++GL +
Sbjct: 615 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 674
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE 661
+ DF +EP EH C++DLLGR GRL EA + M +K N +W SLL +C++H NL+
Sbjct: 675 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 734
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
G AA LS+LEP + S Y+ SNM A GRWE+VE +R M K K CSW++++
Sbjct: 735 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 794
Query: 722 NQIQCFLSDDSGRLRPETIQI 742
+++ F D R P+T++I
Sbjct: 795 DKVSSFGIGD--RTHPQTMEI 813
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 180/707 (25%), Positives = 305/707 (43%), Gaps = 103/707 (14%)
Query: 93 MSQRNLVSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFSWALMITCYTRKGKL-EK 147
M RN VSWNTM++G + + E + F D+ + +F A ++T R G + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 148 ARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQ 204
++ V D A++ Y G S + KVF MP +++VS+ S++ GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 205 NGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV-- 258
G+ + ++ M + V S +L++S D S RQ+ ++ S +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 259 --TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH-KD 315
+++ G + A +FD M ++ +SWN++ AAYAQ+ I+E+ ++F M D
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 316 GVSWTTIINGYIRVGKLDE---AREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASK 368
V+ TT+ +G +D R ++ + + + + L++ GR EA+
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 369 MFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK--------------------- 407
+F Q+ T+D I WNS++A F GR +AL L M
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 408 ------------------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITG 449
N + N ++S Y + G+M + + M R++V+WN+LI G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 450 FLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX-XXXXXXXQVGNQLHEYILKSGYIN 508
+ ++ AL + M EG + T + G LH YI+ +G+ +
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
D V N+LI MYAKCG + S++ +F ++ ++I+WN++++ A +G+ E K +M
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 569 SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV------EDFAIEPLAEHYS------ 616
S V DQ +F LSA + + +G L V + F A+ YS
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600
Query: 617 ------------------CLVDLLGRMGRLEE---AFNVVRGMDVKANAGLWGSLLGACR 655
L+ LGR G EE F+ + M +K + SLL AC
Sbjct: 601 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 660
Query: 656 ----VHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVE 698
V K L + A R LEP + I + ++ +GR E E
Sbjct: 661 HGGLVDKGLAYYDMIA-RDFGLEP-AIEHCICVIDLLGRSGRLAEAE 705
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 172/398 (43%), Gaps = 36/398 (9%)
Query: 311 MPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT-GRVDEASKM 369
MP ++ VSW T+++G +RVG E E + +M I + +++ L+ GR + M
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR---SGSM 57
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAE 429
F R+ + + +A +SG + + VS ++ Y G + +
Sbjct: 58 F-----REGVQVHGFVA---KSGLLSDVY-----------VS-TAILHLYGVYGLVSCSR 97
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
+F+ M +RN+VSW SL+ G+ + + M EG ++++
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 157
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLIS 549
+G Q+ ++KSG + L V N+LI+M G V+ A +F + D ISWNS+ +
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
YA NG+ E+F+ F M + T +LS H G + ++
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG-----IHGLVVK 272
Query: 610 PLAEHYSCLVDLLGRM----GRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEF 665
+ C+ + L RM GR EA V + M K + W SL+ A V+ +
Sbjct: 273 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM-ASFVNDGRSLDAL 330
Query: 666 AAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
+ S + + NY+T ++ A + E+ R+L
Sbjct: 331 GLL-CSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 367
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM 93
+HV KN I K G + + +F+ ++N++T+N+M++ A +G + +L KM
Sbjct: 482 EHV--KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
Query: 94 SQRNL----VSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKL 145
+ S++ ++ +++EE +L + E D+F + Y++ G++
Sbjct: 540 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 599
Query: 146 EKARELLELVPDKLDTA--CWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSML 199
E+++++P ++ + WN +I+ + G F + F+ M + V++ S+L
Sbjct: 600 G---EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 656
Query: 200 AGYTQNGKMGLALHFFEKMA-----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPN 253
+ G + L +++ +A E + ++ SG L+ A K+P PN
Sbjct: 657 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 716
Query: 254 AVSWVTMLCGFARHGKITEARR 275
+ W ++L HG + R+
Sbjct: 717 DLVWRSLLASCKIHGNLDRGRK 738
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 311 bits (797), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 204/707 (28%), Positives = 355/707 (50%), Gaps = 80/707 (11%)
Query: 105 IAGYLHNSMVEEASKLFDVMPE------RDNFSWALMITCYTRKGKLE--KARELLELVP 156
+ G N +EEA KL + M E D F AL+ C ++ + E K +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFV-ALVRLCEWKRAQEEGSKVYSIALSSM 124
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
L NA +A + + G DA VF M ++L S+N ++ GY + G A+ +
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 217 KM-----AEKNVVSWNLMVSGFVNSGDLSSARQL--------FE-KIPNPNAVSWVTMLC 262
+M + +V ++ ++ DL+ +++ +E I NA+ +TM
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNAL--ITM-- 240
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVS 318
+ + G + AR LFD MP ++++SWNAMI+ Y ++ E ++LF M D ++
Sbjct: 241 -YVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMT 299
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQLS 374
T++I+ +G R+++ + A + ++ + L Q G EA K+F+++
Sbjct: 300 LTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359
Query: 375 TRDTICWNSMIAGFCQSGRMDEALDLFRQM------PKKNSVSW---------------- 412
+D + W +MI+G+ + D+A+D +R M P + +V+
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 413 -----------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL 455
N +I+ Y++ +D A +IF + +N++SW S+I G N+
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479
Query: 456 YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
F+AL L M + +P+ T G ++H ++L++G D F+ NA
Sbjct: 480 CFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
L+ MY +CGR+ +A F + + D+ SWN L++GY+ G + F +M+ V PD
Sbjct: 539 LLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPD 597
Query: 576 QVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
++TFI +L CS + + QGL F M ED+ + P +HY+C+VDLLGR G L+EA +
Sbjct: 598 EITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFI 656
Query: 636 RGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
+ M V + +WG+LL ACR+H +++GE +A + EL+ + YI L N++A+ G+W
Sbjct: 657 QKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWR 716
Query: 696 EVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
EV ++R +M++ GCSW+EV+ ++ FLSDD + P+T +I
Sbjct: 717 EVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDD--KYHPQTKEI 761
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 115/569 (20%), Positives = 222/569 (39%), Gaps = 131/569 (23%)
Query: 8 DDTRGENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNL 67
D RG+ + + ++L I + N I K G V+ A +F +++
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVV--------NALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 68 VTYNSMISVFAKNGKISDARQLF----------DKMSQRNLVS----------------- 100
+++N+MIS + +NG + +LF D M+ +++S
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322
Query: 101 ------------WNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA 148
N++ YL+ EA KLF M +D SW MI+ Y +KA
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 382
Query: 149 RELLELV------PDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSY----NSM 198
+ ++ PD++ A AV++ A G ++ L L+SY N++
Sbjct: 383 IDTYRMMDQDSVKPDEITVA---AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP---NPNAV 255
+ Y++ + AL F + KNV+SW +++G + A ++ PNA+
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAI 499
Query: 256 SWV----------TMLCG-------------------------FARHGKITEARRLFDSM 280
+ ++CG + R G++ A F+S
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ 559
Query: 281 PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIING-----YIRVGK 331
K+V SWN ++ Y++ Q V+LF +M D +++ +++ G +R G
Sbjct: 560 K-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 332 LDEAR-EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS-TRDTICWNSMIAGFC 389
+ ++ E Y P ++ ++ L + G + EA K ++ T D W +++
Sbjct: 619 MYFSKMEDYGVTP--NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL---- 672
Query: 390 QSGRMDEALDL-------FRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV- 441
+ R+ +DL ++ KK+ + + + YA G+ + + M+E +
Sbjct: 673 NACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTV 732
Query: 442 ----SWNSL---ITGFLQNSLYFDALKSL 463
SW + + FL + Y K +
Sbjct: 733 DAGCSWVEVKGKVHAFLSDDKYHPQTKEI 761
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/607 (29%), Positives = 302/607 (49%), Gaps = 88/607 (14%)
Query: 205 NGKMGLALHFFEKMAEKNVV-SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG 263
+G + AL + E N+V ++ LM S + AR++F++IP PN SW +L
Sbjct: 29 HGNIIRALPYPETFLYNNIVHAYALMKSS-------TYARRVFDRIPQPNLFSWNNLLLA 81
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF--------------- 308
+++ G I+E F+ +P ++ V+WN +I Y+ + AVK +
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 309 ----IKMPHKDG-VSWTTIING--------------------YIRVGKLDEAREVYNQMP 343
+K+ +G VS I+G Y VG + +A++V+ +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
++ +LM GL+ G +++A ++F + +D++ W +MI G Q+G EA++ FR+
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 404 MP---------------------------------------KKNSVSWNTMISGYAQAGQ 424
M + + + +I Y +
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX 484
+ A+ +F M+++N+VSW +++ G+ Q +A+K + M R G PD T
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
+ G+Q H + SG I+ + VSN+L+ +Y KCG ++ + ++F + D +SW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
+++S YA G A+E + F +M+ + PD VT G++SACS AGL +G FK M
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 605 DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGE 664
++ I P HYSC++DL R GRLEEA + GM +A W +LL ACR NLEIG+
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Query: 665 FAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQI 724
+AA L EL+PH+ + Y LS+++A G+W+ V +LR MR+K K PG SWI+ + ++
Sbjct: 561 WAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKL 620
Query: 725 QCFLSDD 731
F +DD
Sbjct: 621 HSFSADD 627
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 222/494 (44%), Gaps = 69/494 (13%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEE-AVRVFSNTIHKNLVTY 70
G ++ + M H I ++ F N I+H L K A RVF NL ++
Sbjct: 17 GARNQSRYVKMIHGNIIRALPYPETFLYNN-IVHAYALMKSSTYARRVFDRIPQPNLFSW 75
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+++ ++K G IS+ F+K+ R+ V+WN +I GY + +V A K ++ M RD F
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRD-F 133
Query: 131 SWAL-------MITCYTRKGKLEKARELLELVPDKLDTACW----NAVIAGYAKKGQFSD 179
S L M+ + G + +++ V KL + + ++ YA G SD
Sbjct: 134 SANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVI-KLGFESYLLVGSPLLYMYANVGCISD 192
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A+KVF + ++ V YNS++ G G + AL F M EK+ VSW M+ G +G
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLA 251
Query: 240 SSARQLFEKIP----NPNAVSWVTMLCGFARHGKITE----------------------- 272
A + F ++ + + ++L G I E
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 273 ------------ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDG 316
A+ +FD M KNVVSW AM+ Y Q + +EAVK+F+ M D
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQ 372
+ I+ V L+E + + + + + + L+ + G +D+++++FN+
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 373 LSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSA 428
++ RD + W +M++ + Q GR E + LF +M K + V+ +IS ++AG ++
Sbjct: 432 MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 429 ENIFQAM-EERNIV 441
+ F+ M E IV
Sbjct: 492 QRYFKLMTSEYGIV 505
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 129/293 (44%), Gaps = 28/293 (9%)
Query: 34 KHVFNKNQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQL 89
K+V + ++ G+ G+ EEAV++F + I + T IS A + + Q
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 90 FDKMSQRNLVSW----NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKL 145
K L+ + N+++ Y ++++++LF+ M RD SW M++ Y + G+
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA 453
Query: 146 EKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMP-----VKDLVSYNS 197
+ +L + + K D VI+ ++ G ++ F LM V + Y+
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 198 MLAGYTQNGKMGLALHFFEKMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP--NPNA 254
M+ ++++G++ A+ F M + + W ++S N G+L + E + +P+
Sbjct: 514 MIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHH 573
Query: 255 VSWVTMLCG-FARHGKITEARRLFDSMPCKNV--------VSWNAMIAAYAQD 298
+ T+L +A GK +L M KNV + W + +++ D
Sbjct: 574 PAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSAD 626
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 323/620 (52%), Gaps = 75/620 (12%)
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
YA G + A K+F MP L+SYN ++ Y + G A+ F +M + V +
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGV---KCVP 115
Query: 231 SGFV------NSGDLSSARQLFEKIPNPNAVSWV--------TMLCGFARHGKITEARRL 276
G+ +G+L S + L + SW +L + GK+ AR +
Sbjct: 116 DGYTYPFVAKAAGELKSMK-LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDV 174
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-------IKMPHKDGVSWTTIINGYIRV 329
FD M ++V+SWN MI+ Y ++ +++A+ +F + + H VS + G+++
Sbjct: 175 FDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC-GHLK- 232
Query: 330 GKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
L+ R V+ + K I + AL++ ++ GR+DEA +F+++ RD I W MI
Sbjct: 233 -DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMI 291
Query: 386 AGFCQSGRMDEALDLFRQMP----KKNSVS----------------------W------- 412
G+ + G ++ AL+L R M + N+V+ W
Sbjct: 292 NGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY 351
Query: 413 ------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
++IS YA+ ++D +F + + W+++I G +QN L DAL M
Sbjct: 352 SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
RE +P+ +T + +H Y+ K+G+++ L + L+ +Y+KCG +
Sbjct: 412 RREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTL 471
Query: 527 ESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
ESA ++F I+ D++ W +LISGY ++G A + F +M+ V P+++TF
Sbjct: 472 ESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSA 531
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
L+ACSH+GL +GL LF+ M+E + + HY+C+VDLLGR GRL+EA+N++ + +
Sbjct: 532 LNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEP 591
Query: 643 NAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRV 702
+ +WG+LL AC H+N+++GE AA +L ELEP N NY+ L+N++A GRW+++E++R
Sbjct: 592 TSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRS 651
Query: 703 LMRDKRAGKLPGCSWIEVQN 722
+M + K PG S IE+++
Sbjct: 652 MMENVGLRKKPGHSTIEIRS 671
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 129/540 (23%), Positives = 245/540 (45%), Gaps = 69/540 (12%)
Query: 219 AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS---WVTMLCGFARHGKITEARR 275
A +V + +++ F + +S + L + VS T+ +A G IT AR+
Sbjct: 11 ALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARK 70
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK------DGVSWTTIINGYIRV 329
LF+ MP +++S+N +I Y ++ +A+ +FI+M + DG ++ + +
Sbjct: 71 LFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGEL 130
Query: 330 GKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
+ V+ ++ +D + AL++ + G+V+ A +F+ + RD I WN+MI
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 386 AGFCQSGRMDEALDLF----------------------------------------RQMP 405
+G+ ++G M++AL +F +++
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
K V N +++ Y + G+MD A +F ME R++++W +I G+ ++ +AL+ L
Sbjct: 251 DKIEVK-NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
M EG +P+ T G LH + ++ +D+ + +LI+MYAKC R
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
V+ +VF+ W+++I+G N +A FK+M E+V P+ T +L A
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 586 CSHAGLAN--QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
+A LA+ Q +++ C + + + LV + + G LE A + G+ K
Sbjct: 430 --YAALADLRQAMNI-HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 644 AG---LWGSLLGACRVHKN----LEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
+ LWG+L+ +H + L++ F M S + P N + + N + +G EE
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQV--FMEMVRSGVTP-NEITFTSALNACSHSGLVEE 543
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 140/548 (25%), Positives = 257/548 (46%), Gaps = 96/548 (17%)
Query: 72 SMISV-FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
S +SV +A G I+ AR+LF++M Q +L+S+N +I Y+ + +A +F M
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 128 ---DNFSWALMITCYTRKGKLEKARELLELVPDKL-------DTACWNAVIAGYAKKGQF 177
D +++ + G+L K+ +L +V ++ D NA++A Y G+
Sbjct: 113 CVPDGYTYPFVAKA---AGEL-KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV------VSWNLMVS 231
A VF++M +D++S+N+M++GY +NG M AL F+ M ++V + L V
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 232 GFV-------NSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
G + N L ++L +KI NA+ + + C G++ EAR +FD M ++
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKC-----GRMDEARFVFDRMERRD 283
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV--------SWTTIINGYIRV--GKLDE 334
V++W MI Y +D ++ A++L ++ +GV S ++ ++V GK
Sbjct: 284 VITWTCMINGYTEDGDVENALEL-CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLH 342
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
V Q+ DI ET+L+S + RVD ++F+ S T W+++IAG Q+ +
Sbjct: 343 GWAVRQQVY-SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELV 401
Query: 395 DEALDLFRQMPKK----NSVSWNTMISGYA------------------------------ 420
+AL LF++M ++ N + N+++ YA
Sbjct: 402 SDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGL 461
Query: 421 -----QAGQMDSAENIFQAMEE----RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK 471
+ G ++SA IF ++E +++V W +LI+G+ + +AL+ + M R G
Sbjct: 462 VHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGV 521
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN---ALIAMYAKCGRVES 528
P++ TF + G L ++L+ + L SN ++ + + GR++
Sbjct: 522 TPNEITFTSALNACSHSGLVEEGLTLFRFMLE--HYKTLARSNHYTCIVDLLGRAGRLDE 579
Query: 529 AEQVFTAI 536
A + T I
Sbjct: 580 AYNLITTI 587
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 204/424 (48%), Gaps = 38/424 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KLG V R+ + ++ N++++++ GK+ AR +FD M R+++SWNTMI+G
Sbjct: 134 KLGLVVHG-RILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISG 192
Query: 108 YLHNSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKARELLELVP-----DK 158
Y N + +A +FD M + D+ + M+ LE R + +LV DK
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK 252
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
++ NA++ Y K G+ +A VF+ M +D++++ M+ GYT++G + AL M
Sbjct: 253 IEVK--NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLM 310
Query: 219 ----AEKNVVSWNLMVSGF-----VNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGK 269
N V+ +VS VN G + +++ + + + +++ +A+ +
Sbjct: 311 QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS-DIIIETSLISMYAKCKR 369
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDG----VSWTTIING 325
+ R+F + W+A+IA Q+ + +A+ LF +M +D + +++
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 326 YIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLS----TRD 377
Y + L +A ++ + + A T L+ + G ++ A K+FN + ++D
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQ 433
+ W ++I+G+ G AL +F +M + N +++ + ++ + +G ++ +F+
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 434 AMEE 437
M E
Sbjct: 550 FMLE 553
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 123/553 (22%), Positives = 232/553 (41%), Gaps = 99/553 (17%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYN 71
GE +K+ + H + S G+ + +N + GKVE A VF +++++++N
Sbjct: 128 GELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWN 187
Query: 72 SMISVFAKNGKISDARQLFDKM-------SQRNLVSW----------------------- 101
+MIS + +NG ++DA +FD M +VS
Sbjct: 188 TMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEK 247
Query: 102 ---------NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL 152
N ++ YL ++EA +FD M RD +W MI YT G +E A EL
Sbjct: 248 RLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELC 307
Query: 153 ELV------PDKLDTA-----CWNAV-------IAGYAKKGQFSDAEKVFNLMPVKDLVS 194
L+ P+ + A C +A+ + G+A + Q D++
Sbjct: 308 RLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV-----------YSDIII 356
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN--- 251
S+++ Y + ++ L F ++ + W+ +++G V + +S A LF+++
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 252 -PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS----WNAMIAAYAQDLQIDEAVK 306
PN + ++L +A + +A + + +S ++ Y++ ++ A K
Sbjct: 417 EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 307 LF--IKMPH--KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLI 358
+F I+ H KD V W +I+GY G A +V+ +M + T+ ++
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS 536
Query: 359 QTGRVDEASKMFN-QLSTRDTIC----WNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSW 412
+G V+E +F L T+ + ++ ++GR+DEA +L +P + S W
Sbjct: 537 HSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVW 596
Query: 413 NTMISGY-----AQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+++ Q G+M +A +F+ +E N ++ L + + D K +M
Sbjct: 597 GALLAACVTHENVQLGEM-AANKLFE-LEPENTGNYVLLANIYAALGRWKDMEKVRSMME 654
Query: 468 REG--KKPDQSTF 478
G KKP ST
Sbjct: 655 NVGLRKKPGHSTI 667
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 303/587 (51%), Gaps = 30/587 (5%)
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
+ G FSD L + L S+ S+ A F+++ + N +WN ++
Sbjct: 55 RTGTFSDPYSASKLFAMAALSSFASL----------EYARKVFDEIPKPNSFAWNTLIRA 104
Query: 233 FVNSGDLSSARQLF-----EKIPNPNAVSWVTMLCGFARHGKITEARRL----FDSMPCK 283
+ + D + F E PN ++ ++ A ++ + L S
Sbjct: 105 YASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMP 343
+V N++I Y +D A K+F + KD VSW ++ING+++ G D+A E++ +M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 344 CKDIAAETALMSGLIQT---------GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
+D+ A M G++ GR + N+++ T+ N+M+ + + G +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA-NAMLDMYTKCGSI 283
Query: 395 DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
++A LF M +K++V+W TM+ GYA + ++A + +M +++IV+WN+LI+ + QN
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 455 LYFDALKSL-VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
+AL L ++ K +Q T ++G +H YI K G + V+
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 514 NALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
+ALI MY+KCG +E + +VF ++E D+ W+++I G A++G EA F +M V
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN 633
P+ VTF + ACSH GL ++ LF M ++ I P +HY+C+VD+LGR G LE+A
Sbjct: 464 PNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVK 523
Query: 634 VVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGR 693
+ M + + +WG+LLGAC++H NL + E A RL ELEP N ++ LSN++A+ G+
Sbjct: 524 FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGK 583
Query: 694 WEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
WE V LR MR K PGCS IE+ I FLS D+ E +
Sbjct: 584 WENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 630
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 192/411 (46%), Gaps = 60/411 (14%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNS-MVEEASKLFDVMPER----DNFSWALMITCYT 140
AR++FD++ + N +WNT+I Y V D++ E + +++ +I
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 141 RKGKLEKARELLELVPDKL---DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNS 197
L + L + D N++I Y G A KVF + KD+VS+NS
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 198 MLAGYTQNGKMGLALHFFEKMA----------------------------------EKNV 223
M+ G+ Q G AL F+KM E+N
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 224 VSWNL-----MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFD 278
V+ NL M+ + G + A++LF+ + + V+W TML G+A AR + +
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-----DGVSWTTIINGYIRVGKLD 333
SMP K++V+WNA+I+AY Q+ + +EA+ +F ++ + + ++ + ++ +VG L+
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 334 EAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
R +++ + I + S LI + G ++++ ++FN + RD W++MI G
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 390 QSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
G +EA+D+F +M K N V++ + + G +D AE++F ME
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 26/342 (7%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H + + S G VF N I G ++ A +VF+ K++V++NSMI+ F + G
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYLHNSM----VEEASKLFDVMPE-RDNFSWAL---M 135
A +LF KM ++ + + + G L +E ++ + E R N + L M
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 136 ITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSY 195
+ YT+ G +E A+ L + + +K D W ++ GYA + A +V N MP KD+V++
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 196 NSMLAGYTQNGKMGLALHFF-----EKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
N++++ Y QNGK AL F +K + N ++ +S G L R + I
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 251 ------NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
N + S + + +++ G + ++R +F+S+ ++V W+AMI A +EA
Sbjct: 393 KHGIRMNFHVTSALIHM--YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 305 VKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQM 342
V +F KM +GV++T + G +DEA +++QM
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 54/348 (15%)
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL 120
N ++ NL N+M+ ++ K G I DA++LFD M +++ V+W TM+ GY + E A ++
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 121 FDVMPERDNFSWALMITCYTRKGK------------LEKARELLELVPDKLDTAC----- 163
+ MP++D +W +I+ Y + GK L+K +L ++ +AC
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 164 -----W-----------------NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG 201
W +A+I Y+K G + +VFN + +D+ +++M+ G
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 440
Query: 202 YTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPN-----P 252
+G A+ F KM E NV V++ + ++G + A LF ++ + P
Sbjct: 441 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 500
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNAMIAA--YAQDLQIDE--AVKL 307
+ ++ R G + +A + ++MP S W A++ A +L + E +L
Sbjct: 501 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 560
Query: 308 FIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
P DG + + N Y ++GK + E+ M + E S
Sbjct: 561 LELEPRNDG-AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSS 607
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 327/611 (53%), Gaps = 26/611 (4%)
Query: 167 VIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSW 226
+IA Y+ F+DA+ V +P + S++S++ T+ ++ F +M ++
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV--------TMLCGFARHGKITEARRLFD 278
+ ++ SA ++ ++I + VS + +M + R G++ +AR++FD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDE 334
M K+VV+ +A++ AYA+ ++E V++ +M + VSW I++G+ R G E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 335 AREVYNQMP----CKDIAAETALM-----SGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
A ++ ++ C D ++++ S ++ GR+ + Q +D ++MI
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY-VIKQGLLKDKCVISAMI 294
Query: 386 AGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIV 441
+ +SG + + LF Q + N I+G ++ G +D A +F+ +E+ N+V
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
SW S+I G QN +AL+ M G KP+ T G H +
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
++ ++++ V +ALI MYAKCGR+ ++ VF + +L+ WNSL++G++++G A E
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVM 474
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDL 621
F+ ++ + PD ++F +LSAC GL ++G FK M E++ I+P EHYSC+V+L
Sbjct: 475 SIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 622 LGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNY 681
LGR G+L+EA+++++ M + ++ +WG+LL +CR+ N+++ E AA +L LEP N Y
Sbjct: 535 LGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594
Query: 682 ITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQ 741
+ LSN++A G W EV+ +R M K PGCSWI+V+N++ L+ D + + I
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQIT 654
Query: 742 IILNAISAHMR 752
++ IS MR
Sbjct: 655 EKMDEISKEMR 665
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 198/453 (43%), Gaps = 79/453 (17%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K+GK V S + + SM ++ + G++ DAR++FD+MS +++V+ + ++
Sbjct: 133 KVGKQIHCVSCVSG-LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 108 YLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLE------LVPD 157
Y +EE ++ M E + SW +++ + R G ++A + + PD
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 158 KL--------------------------------DTACWNAVIAGYAKKGQFSDAEKVFN 185
++ D +A+I Y K G +FN
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSS 241
+ + N+ + G ++NG + AL FE E+ NVVSW +++G +G
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 242 ARQLFEKIP----NPNAVSWVTML--CG---FARHGKITEA----RRLFDSMPCKNVVSW 288
A +LF ++ PN V+ +ML CG HG+ T L D NV
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-----NVHVG 426
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM------ 342
+A+I YA+ +I+ + +F MP K+ V W +++NG+ GK E ++ +
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 343 PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEA 397
P D + T+L+S Q G DE K F +S I ++ M+ ++G++ EA
Sbjct: 487 P--DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 398 LDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAE 429
DL ++MP + +S W +++ +D AE
Sbjct: 545 YDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 26/321 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
GK G V + +F+ N+ I+ ++NG + A ++F+ ++ N+VSW
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 103 TMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAREL--LELVP 156
++IAG N EA +LF M + ++ + M+ L R +
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 157 DKLDTA-CWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
LD +A+I YAK G+ + ++ VFN+MP K+LV +NS++ G++ +GK + F
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 216 EKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFAR 266
E + + + +S+ ++S G + F+ + P + M+ R
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGR 537
Query: 267 HGKITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQID----EAVKLFIKMPHKDGVSWTT 321
GK+ EA L MP + + W A++ + +D A KLF P G ++
Sbjct: 538 AGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPG-TYVL 596
Query: 322 IINGYIRVGKLDEAREVYNQM 342
+ N Y G E + N+M
Sbjct: 597 LSNIYAAKGMWTEVDSIRNKM 617
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 173/609 (28%), Positives = 314/609 (51%), Gaps = 23/609 (3%)
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNV 223
IA AK G+ + A +VF+ MP D V++N+ML Y++ G A+ F ++ A+ +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDS 279
S+ ++S + G++ R++ + + + +++ + + A ++F
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 280 MPC--KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEARE 337
M C +N V+W +++ AY Q + A+ +F++MP + +W +I+G+ GKL+
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 338 VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI--CW-------NSMIAGF 388
++ +M + + S L+ D ++ ++ ++ + W NS+++ +
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFY 250
Query: 389 CQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
+ G D+A+ + VSWN++I + G+ + A +F E+NIV+W ++IT
Sbjct: 251 TKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMIT 310
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN 508
G+ +N AL+ V M + G D + G +H ++ G+
Sbjct: 311 GYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQG 370
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
+V NAL+ +YAKCG ++ A++ F I DL+SWN+++ + ++G A +A K + M+
Sbjct: 371 YAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Query: 569 SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
+ + PD VTFIG+L+ CSH+GL +G +F+ MV+D+ I +H +C++D+ GR G L
Sbjct: 431 ASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHL 490
Query: 629 EEAFNVVRGMDV----KANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITL 684
EA ++ +N W +LLGAC H + E+G + L EP +++ L
Sbjct: 491 AEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLL 550
Query: 685 SNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIIL 744
SN++ GRW+E E +R M ++ K PGCSWIEV NQ+ F+ DS R E + L
Sbjct: 551 SNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETL 610
Query: 745 NAISAHMRD 753
N + MR+
Sbjct: 611 NCLQHEMRN 619
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 202/463 (43%), Gaps = 96/463 (20%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF----- 121
LV S I+ AK+G+I+ ARQ+FD M + + V+WNTM+ Y + +EA LF
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 122 -DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW---NAVIAGYAKKGQF 177
D P D++S+ +++ G ++ R++ LV A N++I Y K
Sbjct: 64 SDAKP--DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 178 SDAEKVFNLMPV--KDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
A KVF M ++ V++ S+L Y + AL F +M ++ +WN+M+SG +
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 236 SGDLSSARQLFEKI------PNPNAVSWVTMLCG-------------------------- 263
G L S LF+++ P+ S + C
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 264 --------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD 315
+ + G +A R +S+ VSWN++I A + + ++A+++F P K+
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 316 GVSWTTIINGYIRVGKLDEAREVYNQM-----------------PCKDIA---------- 348
V+WTT+I GY R G ++A + +M C +A
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 349 ------------AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
AL++ + G + EA + F ++ +D + WN+M+ F G D+
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 397 ALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
AL L+ M K ++V++ +++ + +G ++ IF++M
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESM 464
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 176/418 (42%), Gaps = 71/418 (16%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKM--SQRNLVSWNTMIAGYLHNSMVEEASKLFDV 123
+L NS+I ++ K A ++F M RN V+W +++ Y++ E A +F
Sbjct: 104 SLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVE 163
Query: 124 MPERDNFSWALMITCYTRKGKLEKA----RELLE--LVPD-----KLDTAC--------- 163
MP+R F+W +MI+ + GKLE +E+LE PD L AC
Sbjct: 164 MPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVY 223
Query: 164 ------------W-------NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQ 204
W N+V++ Y K G DA + + V VS+NS++ +
Sbjct: 224 GRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK 283
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN------AVSWV 258
G+ AL F EKN+V+W M++G+ +GD A + F ++ A V
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAV 343
Query: 259 TMLC-GFA--RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD 315
C G A HGK+ + V NA++ YA+ I EA + F + +KD
Sbjct: 344 LHACSGLALLGHGKMIHGCLIHCGFQGYAYVG-NALVNLYAKCGDIKEADRAFGDIANKD 402
Query: 316 GVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT----GRVDEASKMFN 371
VSW T++ + G D+A ++Y+ M I + GL+ T G V+E +F
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 372 Q--------LSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-----KKNSVSWNTMI 416
L C MI F + G + EA DL N+ SW T++
Sbjct: 463 SMVKDYRIPLEVDHVTC---MIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLL 517
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 51/340 (15%)
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
V + I+ A++G++ SA +F M E + V+WN+++T + + L+ +A+ +
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
KPD +F + G ++ +++SG+ L V+N+LI MY KC SA
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 530 EQVFTAIEC------------------------VDL---------ISWNSLISGYALNGY 556
+VF + C +D+ +WN +ISG+A G
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE----PLA 612
FK+ML E PD TF +++ACS A+ ++ MV ++
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACS----ADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEF-AAMRLS 671
E + ++ ++G ++A + ++V W S++ AC ++IGE A+ +
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVS-WNSIIDAC-----MKIGETEKALEVF 294
Query: 672 ELEPHNASNYITLSNMHAEAGRWEEVER-LRVLMRDKRAG 710
L P N +T + M GR + E+ LR + ++G
Sbjct: 295 HLAPEK--NIVTWTTMITGYGRNGDGEQALRFFVEMMKSG 332
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 151/354 (42%), Gaps = 42/354 (11%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
M H + + + V KN + KLG ++A+R + V++NS+I K G
Sbjct: 226 MVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIG 285
Query: 82 KISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PERDNFSWALMIT 137
+ A ++F ++N+V+W TMI GY N E+A + F M + D+F++ +
Sbjct: 286 ETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAV-- 343
Query: 138 CYTRKGKLEKARELLELVPDKLDTACW------------NAVIAGYAKKGQFSDAEKVFN 185
L L L K+ C NA++ YAK G +A++ F
Sbjct: 344 -------LHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFG 396
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV----NSGDLSS 241
+ KDLVS+N+ML + +G AL ++ M + N+ G + +SG +
Sbjct: 397 DIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEE 456
Query: 242 ARQLFEKIPN----PNAVSWVT-MLCGFARHGKITEARRL---FDSM--PCKNVVSWNAM 291
+FE + P V VT M+ F R G + EA+ L + S+ N SW +
Sbjct: 457 GCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETL 516
Query: 292 IAAYAQDLQID---EAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
+ A + + E K+ + +S+ + N Y G+ E +V +M
Sbjct: 517 LGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREM 570
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/515 (32%), Positives = 282/515 (54%), Gaps = 14/515 (2%)
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM- 311
N+ V ++ +A + AR++FD +P +NV+ N MI +Y + E VK+F M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 312 ---PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVD 364
D ++ ++ G + R+++ +++ + +GL+ + G +
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK-KNSVSWNTMISGYAQAG 423
EA + +++S RD + WNS++ G+ Q+ R D+AL++ R+M K S TM S
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS 252
Query: 424 QMDS-----AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ +++F M ++++VSWN +I +++N++ +A++ M +G +PD +
Sbjct: 253 NTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
+G ++H YI + I +L + NALI MYAKCG +E A VF ++
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
D++SW ++IS Y +G +A F ++ +VPD + F+ L+ACSHAGL +G
Sbjct: 373 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHK 658
FK M + + I P EH +C+VDLLGR G+++EA+ ++ M ++ N +WG+LLGACRVH
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHS 492
Query: 659 NLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
+ +IG AA +L +L P + Y+ LSN++A+AGRWEEV +R +M+ K K PG S +
Sbjct: 493 DTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
Query: 719 EVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
EV I FL D + + I L+ + M++
Sbjct: 553 EVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE 587
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 193/426 (45%), Gaps = 57/426 (13%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PERD 128
++ +A ++ AR++FD++ +RN++ N MI Y++N E K+F M D
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 129 NFSWALMITCYTRKGKLEKARELL-ELVPDKLDTACW--NAVIAGYAKKGQFSDAEKVFN 185
++++ ++ + G + R++ L + + N +++ Y K G S+A V +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQL 245
M +D+VS+NS++ GY QN + AL +M + S D + L
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI------------SHDAGTMASL 247
Query: 246 FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAV 305
+ N + + + +F M K++VSWN MI Y ++ EAV
Sbjct: 248 LPAVSNTTTEN-------------VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAV 294
Query: 306 KLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI--- 358
+L+ +M D VS T+++ L ++++ + K + L + LI
Sbjct: 295 ELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMY 354
Query: 359 -QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWN 413
+ G +++A +F + +RD + W +MI+ + SGR +A+ LF ++ +S+++
Sbjct: 355 AKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFV 414
Query: 414 TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV-LMGREGKK 472
T ++ + AG ++ + F+ L+T + + + L +V L+GR GK
Sbjct: 415 TTLAACSHAGLLEEGRSCFK------------LMTDHYKITPRLEHLACMVDLLGRAGKV 462
Query: 473 PDQSTF 478
+ F
Sbjct: 463 KEAYRF 468
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 160/374 (42%), Gaps = 67/374 (17%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDA--------- 86
+F N + GK G + EA V +++V++NS++ +A+N + DA
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 87 ----------------------------RQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
+ +F KM +++LVSWN MI Y+ N+M EA
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAV 294
Query: 119 KLFDVMPERDNFS------WALMITC-----YTRKGKLEKARELLELVPDKLDTACWNAV 167
+L+ M E D F +++ C + K+ E +L+P+ L NA+
Sbjct: 295 ELYSRM-EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL---LENAL 350
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV--- 224
I YAK G A VF M +D+VS+ +M++ Y +G+ A+ F K+ + +V
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDS 410
Query: 225 -SWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFD 278
++ ++ ++G L R F+ + + P M+ R GK+ EA R
Sbjct: 411 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470
Query: 279 SMPCK-NVVSWNAMIAAYA----QDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLD 333
M + N W A++ A D+ + A KLF P + G + + N Y + G+ +
Sbjct: 471 DMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAKAGRWE 529
Query: 334 EAREVYNQMPCKDI 347
E + N M K +
Sbjct: 530 EVTNIRNIMKSKGL 543
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 364/703 (51%), Gaps = 42/703 (5%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS 131
S + + A++G F + + + + + + +H ++E FD+ P D+
Sbjct: 47 SALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIE-----FDIEP--DSVL 99
Query: 132 WALMITCYTRKGKLEKARELLELVP--DKLDTACWNAVIAGYAKKGQFSDAEKVF----N 185
+ +I+ Y++ G KA ++ E + K D W+A++A Y G+ DA KVF
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLA---LHFFEKMA--EKNVVSWNLMVSGFVNS-GDL 239
L V + Y +++ + + +G+ L F K E +V ++ FV
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS----WNAMIAAY 295
+A ++F+K+ N V+W M+ + G EA R F M S +++ +A
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 296 AQDLQIDEAVKLF---IKMPHKDGVSWTTIINGYIRV---GKLDEAREVYNQMPCKDIAA 349
A+ + +L I+ D V ++++ Y + G +D+ R+V+++M + +
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVE-CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 350 ETALMSGLIQTGRV-DEASKMFNQLSTRDTICWN--SMIAGFCQSGRMDEAL-------D 399
TAL++G ++ + EA +F+++ T+ + N + + F G + +
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Query: 400 LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDA 459
F++ NS N++IS + ++ +M+ A+ F+++ E+N+VS+N+ + G +N + A
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQA 458
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
K L + TF + G Q+H ++K G + V NALI+M
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 518
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
Y+KCG +++A +VF +E ++ISW S+I+G+A +G+AI + F QM+ E V P++VT+
Sbjct: 519 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578
Query: 580 IGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+ +LSACSH GL ++G F M ED I+P EHY+C+VDLL R G L +AF + M
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
+A+ +W + LGACRVH N E+G+ AA ++ EL+P+ + YI LSN++A AG+WEE
Sbjct: 639 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 698
Query: 700 LRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
+R M+++ K GCSWIEV ++I F D+ P QI
Sbjct: 699 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTA--HPNAHQI 739
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 231/501 (46%), Gaps = 71/501 (14%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM---SQRNLVSWNTM 104
+LGK+ A R+ I + V YNS+IS+++K+G + A +F+ M +R++VSW+ M
Sbjct: 79 RLGKLVHA-RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAM 137
Query: 105 IAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPD--- 157
+A Y +N +A K+F E +++ + +I + + R L +
Sbjct: 138 MACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH 197
Query: 158 -KLDTACWNAVIAGYAK-KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
+ D ++I + K + F +A KVF+ M ++V++ M+ Q G A+ FF
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 216 EKMA----EKNVVSWNLMVSGFVNSGDLSSARQLF-----EKIPNPNAVSWVTMLCGFAR 266
M E + + + + S +LS +QL + + S V M +
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSA 317
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQI-DEAVKLFIKMPHKDGVSWT--TII 323
G + + R++FD M +V+SW A+I Y ++ + EA+ LF +M + V T
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 324 NGYIRVGKLDEAR---EVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTR 376
+ + G L + R +V Q + +A+ + +++S +++ R+++A + F LS +
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----------------------------- 407
+ + +N+ + G C++ ++A L ++ ++
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 408 ----------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
N N +IS Y++ G +D+A +F ME RN++SW S+ITGF ++
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 458 DALKSLVLMGREGKKPDQSTF 478
L++ M EG KP++ T+
Sbjct: 558 RVLETFNQMIEEGVKPNEVTY 578
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 159/315 (50%), Gaps = 22/315 (6%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
+ F + N NS+IS+F K+ ++ DA++ F+ +S++NLVS+NT + G N E+
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 117 ASKLFDVMPERD----NFSWALMITCYTRKGKLEKARELLELVPDKLDTAC----WNAVI 168
A KL + ER+ F++A +++ G + K ++ V KL +C NA+I
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQPVCNALI 516
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----V 224
+ Y+K G A +VFN M ++++S+ SM+ G+ ++G L F +M E+ V V
Sbjct: 517 SMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEV 576
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAVSWVTMLCGFARHGKITEARRLFDS 279
++ ++S + G +S + F + P + M+ R G +T+A ++
Sbjct: 577 TYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINT 636
Query: 280 MPCK-NVVSWNAMIAA--YAQDLQIDE-AVKLFIKMPHKDGVSWTTIINGYIRVGKLDEA 335
MP + +V+ W + A + ++ + A + +++ + ++ + N Y GK +E+
Sbjct: 637 MPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEES 696
Query: 336 REVYNQMPCKDIAAE 350
E+ +M +++ E
Sbjct: 697 TEMRRKMKERNLVKE 711
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 459 ALKSLVLMGREGKKP-DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
A+ +L LM R+G +P D TF ++G +H +++ D + N+LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 518 AMYAKCGRVESAEQVFTAIECV---DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
++Y+K G AE VF + D++SW+++++ Y NG ++A K F + L +VP
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 575 DQVTFIGMLSACSHAGLANQG 595
+ + ++ ACS++ G
Sbjct: 165 NDYCYTAVIRACSNSDFVGVG 185
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--- 96
N I K G ++ A RVF+ ++N++++ SMI+ FAK+G + F++M +
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 97 -NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARE 150
N V++ +++ H +V E + F+ M E +A M+ R G L A E
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 151 LLELVPDKLDTACWNAVIAGY-----AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQN 205
+ +P + D W + + G+ + A K+ L P + +Y + Y
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLA-ARKILELDP-NEPAAYIQLSNIYACA 690
Query: 206 GKMGLALHFFEKMAEKNVV 224
GK + KM E+N+V
Sbjct: 691 GKWEESTEMRRKMKERNLV 709
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 326/632 (51%), Gaps = 57/632 (9%)
Query: 167 VIAGYAKKGQFSDAEKVF---NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
+I+ YA+ G DA VF +L+ + DL +NS+L +G AL + M ++ +
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 224 VSWNLMVSGFVNS----GDLSSARQLFEKI------PNPNAVSWVTMLCGFARHGKITEA 273
++ + + G R ++ N + V+ +L + + G++ +A
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVN--ELLTLYPKAGRMGDA 212
Query: 274 RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRV 329
LF MP +N +SWN MI ++Q+ + AVK+F M + D V+WT++++ + +
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 330 GKLDEAREVYNQMPCK-------------DIAAETALMS------GLIQTGRVDEASKMF 370
GK ++ + ++ M + AE +S G + G +E
Sbjct: 273 GKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEE----- 327
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAEN 430
L +R N++I + + G++ +A LFRQ+ K SWN++I+ + AG++D A +
Sbjct: 328 -YLPSR-----NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALS 381
Query: 431 IFQAMEE--------RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
+F +EE N+V+W S+I G D+L+ M + T
Sbjct: 382 LFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCIL 441
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
+G ++H +++++ ++ V NAL+ MYAKCG + VF AI DLI
Sbjct: 442 SICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLI 501
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
SWNS+I GY ++G+A +A F +M+S PD + + +LSACSHAGL +G ++F M
Sbjct: 502 SWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSM 561
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEI 662
+ F +EP EHY+C+VDLLGR+G L+EA +V+ M ++ + G+LL +CR+HKN++I
Sbjct: 562 SKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDI 621
Query: 663 GEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQN 722
E A +LS LEP +Y+ LSN+++ GRWEE +R L + K K+ G SWIEV+
Sbjct: 622 AEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKK 681
Query: 723 QIQCFLSDDSGRLRPETIQIILNAISAHMRDK 754
+ F S + ETI +L + +HM K
Sbjct: 682 KKYKFSSGSIVQSEFETIYPVLEDLVSHMLKK 713
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 195/419 (46%), Gaps = 49/419 (11%)
Query: 45 HLGKLGKVEE-AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+LG+ G +V + +NL N +++++ K G++ DA LF +M RN +SWN
Sbjct: 170 YLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNV 229
Query: 104 MIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLE---KARELLELVP 156
MI G+ E A K+F+ M D +W +++C+++ GK E K L+ +
Sbjct: 230 MIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSG 289
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKD-----LVSYNSMLAGYTQNGKMGLA 211
+ + + A+ S AEKV + +K L S N+++ Y + GK+ A
Sbjct: 290 NAVSGEALAVFFSVCAELEALSIAEKVHGYV-IKGGFEEYLPSRNALIHVYGKQGKVKDA 348
Query: 212 LHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKIT 271
H F ++ K + SWN +++ FV++G L A LF ++ N V V
Sbjct: 349 EHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVK------------ 396
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYI 327
NVV+W ++I + D++++ F +M + V+ I++
Sbjct: 397 -----------ANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICA 445
Query: 328 RVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNS 383
+ L+ RE++ + ++I + AL++ + G + E S +F + +D I WNS
Sbjct: 446 ELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNS 505
Query: 384 MIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+I G+ G ++AL +F +M + ++ ++S + AG ++ IF +M +R
Sbjct: 506 IIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKR 564
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 203/447 (45%), Gaps = 50/447 (11%)
Query: 72 SMISVFAKNGKISDARQLFDKMS---QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER- 127
++ISV+A+ G + DAR +F+ +S +L WN+++ + + + E A +L+ M +R
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 128 ---DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAE 181
D + L++ G+ R V K + N ++ Y K G+ DA
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSG 237
+F MPV++ +S+N M+ G++Q A+ FE M + V+W ++S G
Sbjct: 214 NLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 238 DLSSARQLFEKIP-NPNAVSWVTMLCGFA-------------RHGKITEARRLFDSMPCK 283
+ F + + NAVS + F+ HG + + + +P +
Sbjct: 274 KFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKG-GFEEYLPSR 332
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMP 343
NA+I Y + ++ +A LF ++ +K SW ++I ++ GKLDEA +++++
Sbjct: 333 -----NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELE 387
Query: 344 -----CK---DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMD 395
C ++ T+++ G GR D++ + F Q+ + + I
Sbjct: 388 EMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAEL 447
Query: 396 EALDLFRQMPK---KNSVSWNTMISG-----YAQAGQMDSAENIFQAMEERNIVSWNSLI 447
AL+L R++ + S+S N ++ YA+ G + +F+A+ +++++SWNS+I
Sbjct: 448 PALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSII 507
Query: 448 TGFLQNSLYFDALKSLVLMGREGKKPD 474
G+ + AL M G PD
Sbjct: 508 KGYGMHGFAEKALSMFDRMISSGFHPD 534
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 148/350 (42%), Gaps = 70/350 (20%)
Query: 43 IIHL-GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ------ 95
+IH+ GK GKV++A +F +K + ++NS+I+ F GK+ +A LF ++ +
Sbjct: 335 LIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCN 394
Query: 96 --RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCY----TRKGKLEKAR 149
N+V+W ++I G +++ + F M + ++ I C L R
Sbjct: 395 VKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGR 454
Query: 150 ELLELVPDKL---DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNG 206
E+ V + NA++ YAK G S+ VF + KDL+S+NS++ GY +G
Sbjct: 455 EIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHG 514
Query: 207 KMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFAR 266
AL F++M + SGF +P+ ++ V +L +
Sbjct: 515 FAEKALSMFDRM----------ISSGF-----------------HPDGIALVAVLSACSH 547
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGY 326
G + + R +F SM K F P ++ + I++
Sbjct: 548 AGLVEKGREIFYSMS------------------------KRFGLEPQQE--HYACIVDLL 581
Query: 327 IRVGKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLST 375
RVG L EA E+ MP + + AL++ VD A + +QLS
Sbjct: 582 GRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSV 631
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 190/661 (28%), Positives = 331/661 (50%), Gaps = 62/661 (9%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG---LALHFFEKMAEK 221
N ++ YAK G+ + A +FN + KD+VS+NS++ GY+QNG + + F +M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 222 NVVSWNLMVSG-FVNSGDLSS------ARQLFEKIPNPNAVSWVTMLCG-FARHGKITEA 273
+++ ++G F L S A L K+ + + T L G + + G + +
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 274 RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK---LFIKMPHKDGVS---WTTIING-- 325
++F MP +N +W+ M++ YA +++EA+K LF++ + S +T +++
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 326 ---YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
Y+ +G+ + N + +A AL++ + ++EA KMF+ R++I W+
Sbjct: 233 ATIYVGLGRQIHCITIKNGL-LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 383 SMIAGFCQSGRMDEALDLFRQM------PKKNSV-------------------------- 410
+M+ G+ Q+G EA+ LF +M P + ++
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 411 -------SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
+ ++ YA+AG + A F ++ER++ W SLI+G++QNS +AL
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
M G P+ T ++G Q+H + +K G+ ++ + +AL MY+KC
Sbjct: 412 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKC 471
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
G +E VF D++SWN++ISG + NG EA + F++ML+E + PD VTF+ ++
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNII 531
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
SACSH G +G F M + ++P +HY+C+VDLL R G+L+EA + ++
Sbjct: 532 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHG 591
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
LW LL AC+ H E+G +A +L L +S Y+ LS ++ GR +VER+
Sbjct: 592 LCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKH 651
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDKFNVFNMQSV 763
MR K GCSWIE++NQ F+ D+ E + ++ +S M ++ V + S
Sbjct: 652 MRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSS 711
Query: 764 F 764
F
Sbjct: 712 F 712
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 224/483 (46%), Gaps = 83/483 (17%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS---KLFDVMPER 127
N +++ +AK GK++ A +F+ + +++VSWN++I GY N + + +LF M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 128 DNFSWALMITCYTRKGKLE------------KARELLELVPDKLDTACWNAVIAGYAKKG 175
D ++ YT G + +A L+ + D +++ Y K G
Sbjct: 113 D-----ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG 167
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF-------EKMAEKNVVSWNL 228
D KVF MP ++ ++++M++GY G++ A+ F E+ ++ + V +
Sbjct: 168 LVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTA 226
Query: 229 MVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKN 284
++S + + RQ+ + +V ++ +++ + EA ++FDS +N
Sbjct: 227 VLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRN 286
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKM------PHKDGVSWTTIINGYIRVGKLDEAREV 338
++W+AM+ Y+Q+ + EAVKLF +M P + + ++N + L+E +++
Sbjct: 287 SITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI--VGVLNACSDICYLEEGKQL 344
Query: 339 YNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
++ + + + A TAL+ + G + +A K F+ L RD W S+I+G+ Q+
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404
Query: 395 DEALDLFRQM---------PKKNSV-----SWNTMISG---------------------- 418
+EAL L+R+M P SV S T+ G
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSAL 464
Query: 419 ---YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
Y++ G ++ +F+ +++VSWN++I+G N +AL+ M EG +PD
Sbjct: 465 STMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Query: 476 STF 478
TF
Sbjct: 525 VTF 527
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/493 (20%), Positives = 218/493 (44%), Gaps = 102/493 (20%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDAR---QLFDKMSQRNLVSWNTM 104
K GK+ +A +F+ I K++V++NS+I+ +++NG IS + QLF +M ++++
Sbjct: 61 KCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 105 IAG---------------------------------------YLHNSMVEEASKLFDVMP 125
+AG Y +VE+ K+F MP
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTA-----CWNAVIAGYAKKGQFSDA 180
ER+ ++W+ M++ Y +G++E+A ++ L + + + AV++ A
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLG 240
Query: 181 EKVFNLMPVKDLVSY----NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS 236
++ + L+ + N+++ Y++ + A F+ ++N ++W+ MV+G+ +
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQN 300
Query: 237 GDLSSARQLFEKI------PNPNAVSWVTMLC-------------------GFARH---- 267
G+ A +LF ++ P+ + V C GF RH
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFAT 360
Query: 268 ----------GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV 317
G + +AR+ FD + ++V W ++I+ Y Q+ +EA+ L+ +M +
Sbjct: 361 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 318 ----SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL----IQTGRVDEASKM 369
+ +++ + L+ ++V+ E + S L + G +++ + +
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLV 480
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQM 425
F + +D + WN+MI+G +G+ DEAL+LF +M + + V++ +IS + G +
Sbjct: 481 FRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFV 540
Query: 426 DSAENIFQAMEER 438
+ F M ++
Sbjct: 541 ERGWFYFNMMSDQ 553
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 181/408 (44%), Gaps = 48/408 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+++++++K +++A ++FD RN ++W+ M+ GY N EA KLF M F
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM-----F 314
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLDTA------------CWNAVIAGYAKKGQFS 178
S + + YT G L ++ L K + A++ YAK G +
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD 238
DA K F+ + +D+ + S+++GY QN AL + +M ++ + ++ + +
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 239 LSSARQLFEKIPN-----------PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
+ +L +++ P + TM +++ G + + +F P K+VVS
Sbjct: 435 SLATLELGKQVHGHTIKHGFGLEVPIGSALSTM---YSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGKLDEAREVYNQM- 342
WNAMI+ + + Q DEA++LF +M D V++ II+ G ++ +N M
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551
Query: 343 ------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC-WNSMIAGFCQSGRMD 395
P D A ++ L + G++ EA + + +C W +++ G+ +
Sbjct: 552 DQIGLDPKVDHYA--CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCE 609
Query: 396 ---EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
A + + + S ++ + Y G+M E +++ M +
Sbjct: 610 LGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGV 657
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 145/308 (47%), Gaps = 20/308 (6%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
++L +++ ++AK G ++DAR+ FD + +R++ W ++I+GY+ NS EEA L+ M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 125 PER----DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQF 177
++ + A ++ + LE +++ L+ +A+ Y+K G
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSL 474
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGF 233
D VF P KD+VS+N+M++G + NG+ AL FE+M E + V++ ++S
Sbjct: 475 EDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISAC 534
Query: 234 VNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN-VVS 287
+ G + F + +P + M+ +R G++ EA+ +S + +
Sbjct: 535 SHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCL 594
Query: 288 WNAMIAAYAQDLQIDEAV---KLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
W +++A + + V + + + ++ ++ + Y +G++ + V+ M
Sbjct: 595 WRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRA 654
Query: 345 KDIAAETA 352
++ E
Sbjct: 655 NGVSKEVG 662
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 144/324 (44%), Gaps = 28/324 (8%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N + K + EA ++F ++ +N +T+++M++ +++NG+ +A +LF +M +
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 100 SWNTMIAGYLHN----SMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAREL 151
I G L+ +EE +L + ER F+ ++ Y + G L AR+
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 152 LELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLA 211
+ + ++ D A W ++I+GY + +A ++ M ++ + +A + LA
Sbjct: 380 FDCLQER-DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS-SLA 437
Query: 212 LHFFEKMAEKNVVSWNL---------MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLC 262
K + + + + + G L +F + PN + VSW M+
Sbjct: 438 TLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMIS 497
Query: 263 GFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS 318
G + +G+ EA LF+ M + + V++ +I+A + ++ F M + G+
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLD 557
Query: 319 -----WTTIINGYIRVGKLDEARE 337
+ +++ R G+L EA+E
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKE 581
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P ST G +H I+++G + +N L+ YAKCG++ A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAF---KAFKQMLSEEVVPDQVTFIGMLSA 585
F AI C D++SWNSLI+GY+ NG ++ + F++M +++++P+ T G+ A
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNT 103
K G +E+ VF T +K++V++N+MIS + NG+ +A +LF++M + V++
Sbjct: 470 KCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVN 529
Query: 104 MIAGYLHNSMVEEASKLFDVM-------PERDNFSWALMITCYTRKGKLEKARELLELVP 156
+I+ H VE F++M P+ D++ A M+ +R G+L++A+E +E
Sbjct: 530 IISACSHKGFVERGWFYFNMMSDQIGLDPKVDHY--ACMVDLLSRAGQLKEAKEFIESAN 587
Query: 157 DKLDTACWNAVIAGYAKKGQFS----DAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
W +++ G+ EK+ L ++ +Y + YT G+M
Sbjct: 588 IDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGS-RESSTYVQLSGIYTALGRM 642
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 331/659 (50%), Gaps = 65/659 (9%)
Query: 164 WNAVIAGYAKKGQFSDAEKVF------NLMPVKDLVSYNSMLAGYTQNGKMGLALH-FFE 216
+N++I GYA G ++A +F + P K + ++ G+ +H
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 217 KMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARR 275
KM K++ N +V + G+L SAR++F+++ N VSW +M+CG+AR +A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 276 LF-----DSMPCKNVVSWNAMIAAYA--QDLQIDEAVKLFIKMP--HKDGVSWTTIINGY 326
LF D N V+ +I+A A +DL+ E V FI+ + + + +++ Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL------------- 373
++ +D A+ ++++ ++ A+ S ++ G EA +FN +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 374 ---------------------------STRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
+ D IC N++I + + R D A +F +M
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 407 KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
K V+WN++++GY + G++D+A F+ M E+NIVSWN++I+G +Q SL+ +A++ M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 467 -GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
+EG D T + ++ YI K+G D+ + L+ M+++CG
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
ESA +F ++ D+ +W + I A+ G A A + F M+ + + PD V F+G L+A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CSH GL QG ++F M++ + P HY C+VDLLGR G LEEA ++ M ++ N
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W SLL ACRV N+E+ +AA ++ L P +Y+ LSN++A AGRW ++ ++R+ M+
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMK 700
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAIS------AHMRDKFNVF 758
+K K PG S I+++ + F S D I+ +L+ +S H+ D NV
Sbjct: 701 EKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVL 759
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 209/484 (43%), Gaps = 101/484 (20%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF--- 121
K+L NS++ +A+ G++ AR++FD+MS+RN+VSW +MI GY ++A LF
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 122 ----DVMP---------------------------------ERDNFSWALMITCYTRKGK 144
+V P E ++ + ++ Y +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 145 LEKARELL-ELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM----PVKDLVSY---- 195
++ A+ L E LD NA+ + Y ++G +A VFNLM D +S
Sbjct: 287 IDVAKRLFDEYGASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 196 -------------------------------NSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N+++ Y + + A F++M+ K VV
Sbjct: 345 SSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV 404
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
+WN +V+G+V +G++ +A + FE +P N VSW T++ G + EA +F SM +
Sbjct: 405 TWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE 464
Query: 285 VVSWNAM----IAAYAQDLQIDEAVKLFIKMPHKDGVSW-----TTIINGYIRVGKLDEA 335
V+ + + IA+ L + K K+G+ TT+++ + R G + A
Sbjct: 465 GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Query: 336 REVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQS 391
++N + +D++A TA + + G + A ++F+ + + D + + +
Sbjct: 525 MSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHG 584
Query: 392 GRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNS 445
G + + ++F M K + VS + M+ +AG ++ A + + M E N V WNS
Sbjct: 585 GLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNS 644
Query: 446 LITG 449
L+
Sbjct: 645 LLAA 648
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 198/481 (41%), Gaps = 95/481 (19%)
Query: 253 NAVSWVTML----CGFARHGKITEARRLFD-SMPCKNVVSWNAMIAAYAQDLQIDEAVKL 307
N VS +T L C ++ A+ +F+ S +N++I YA +EA+ L
Sbjct: 62 NDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILL 121
Query: 308 FIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQ 359
F++M + D ++ ++ + +++ + KD+ + +L+ +
Sbjct: 122 FLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT----- 414
G +D A K+F+++S R+ + W SMI G+ + +A+DLF +M + V+ N+
Sbjct: 182 CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 415 -----------------------------------MISGYAQAGQMDSAENIFQAMEERN 439
++ Y + +D A+ +F N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
+ N++ + +++ L +AL LM G +PD+ + G H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIE 559
Y+L++G+ + + NALI MY KC R ++A ++F + +++WNS+++GY NG
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 560 AFKAFKQMLSEEVV--------------------------------PDQVTFIGMLSACS 587
A++ F+ M + +V D VT + + SAC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 588 HAGLANQGLDLFKCM---VEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVK 641
H G LDL K + +E I+ + LVD+ R G E A FN + DV
Sbjct: 482 HLG----ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 642 A 642
A
Sbjct: 538 A 538
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 25/242 (10%)
Query: 394 MDEALDLFRQMPKK---NSVSWNT-MISGYAQAGQMDS---AENIFQAMEERNIV-SWNS 445
+DE R + K+ N VS T +++ + G +S A+ +F+ E +NS
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
LI G+ + L +A+ + M G PD+ TF G Q+H I+K G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
Y DLFV N+L+ YA+CG ++SA +VF + +++SW S+I GYA +A +A F
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 566 QML-SEEVVPDQVTFIGMLSACS-----------HAGLANQGLDLFKCMVEDFAIEPLAE 613
+M+ EEV P+ VT + ++SAC+ +A + N G++ V D + L +
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE-----VNDLMVSALVD 279
Query: 614 HY 615
Y
Sbjct: 280 MY 281
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 181/589 (30%), Positives = 308/589 (52%), Gaps = 27/589 (4%)
Query: 187 MPV-----KDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV-VSWNLMVSGFVNSGDLS 240
MP+ + + S L+ + ++ A+ E + ++ + + ++L+ S GD
Sbjct: 1 MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTK 60
Query: 241 SARQ--------LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
S +Q PN + ++ + + GK +A ++FD M +N+ SWN M+
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMV 120
Query: 293 AAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
+ Y + + A +F MP +D VSW T++ GY + G L EA Y + I
Sbjct: 121 SGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 353 LMSGLIQTGRVDEASKMFNQLS---------TRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
+GL+ T V N+ + + + S+I + + G+M+ A F +
Sbjct: 181 SFAGLL-TACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 404 MPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
M K+ W T+ISGYA+ G M++AE +F M E+N VSW +LI G+++ AL
Sbjct: 240 MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
M G KP+Q TF + G ++H Y++++ + V ++LI MY+K
Sbjct: 300 RKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKS 359
Query: 524 GRVESAEQVFTAIECV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
G +E++E+VF + D + WN++IS A +G +A + M+ V P++ T + +
Sbjct: 360 GSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVI 419
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
L+ACSH+GL +GL F+ M I P EHY+CL+DLLGR G +E + M +
Sbjct: 420 LNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEP 479
Query: 643 NAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRV 702
+ +W ++LG CR+H N E+G+ AA L +L+P +++ YI LS+++A+ G+WE VE+LR
Sbjct: 480 DKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRG 539
Query: 703 LMRDKRAGKLPGCSWIEVQNQIQCF-LSDDS-GRLRPETIQIILNAISA 749
+M+ +R K SWIE++ +++ F +SD S R E I IL+ ++A
Sbjct: 540 VMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAA 588
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 222/507 (43%), Gaps = 84/507 (16%)
Query: 12 GENHKIKMTSMKHK-LTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTY 70
G+ +K H+ L I + N I K GK +A +VF +NL ++
Sbjct: 57 GDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSW 116
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
N+M+S + K+G + AR +FD M +R++VSWNTM+ GY + + EA +
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 128 -DNFSWALMITCYTRKGKLEKARE-----LLELVPDKLDTACWNAVIAGYAKKGQFSDAE 181
+ FS+A ++T + +L+ R+ L+ + +C ++I YAK GQ A+
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSC--SIIDAYAKCGQMESAK 234
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
+ F+ M VKD+ + ++++GY + G M A F +M EKN VSW +++G+V G +
Sbjct: 235 RCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNR 294
Query: 242 ARQLFEKI----PNPNAVSWVTMLCGFA-----RHGK----------------------- 269
A LF K+ P ++ + LC A RHGK
Sbjct: 295 ALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLID 354
Query: 270 -------ITEARRLF----DSMPCKNVVSWNAMIAAYAQD-------LQIDEAVKLFIKM 311
+ + R+F D C V WN MI+A AQ +D+ +K ++
Sbjct: 355 MYSKSGSLEASERVFRICDDKHDC---VFWNTMISALAQHGLGHKALRMLDDMIKFRVQ- 410
Query: 312 PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETALMSGLIQTGRVDEA 366
P++ + I+N G ++E + M + D L+ L + G E
Sbjct: 411 PNR--TTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 367 SKMFNQLS-TRDTICWNSMIAGFCQSGRMDE----ALDLFRQMPKKNSVSWNTMISGYAQ 421
+ ++ D WN+++ G C+ +E A D ++ ++S + + S YA
Sbjct: 469 MRKIEEMPFEPDKHIWNAIL-GVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 422 AGQMDSAENIFQAMEERNI-----VSW 443
G+ + E + M++R + VSW
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSW 554
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 302 bits (773), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 198/671 (29%), Positives = 338/671 (50%), Gaps = 71/671 (10%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV- 223
N ++ Y K G F KVF+ + ++ VS+NS+++ K +AL F M ++NV
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 224 ------VSWNLMVSGFVNSGDLSSARQLFE---KIPNPNAVSWVTMLCGFARHGKITEAR 274
VS S L +Q+ + N+ T++ + + GK+ ++
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIING----- 325
L S +++V+WN ++++ Q+ Q+ EA++ +M D + ++++
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 326 YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
+R GK A + N ++ +AL+ +V ++F+ + R WN+MI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 386 AGFCQSGRMDEALDLFRQMPKK-----NSVSW---------------------------- 412
AG+ Q+ EAL LF M + NS +
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 413 -------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
NT++ Y++ G++D A IF ME+R++V+WN++ITG++ + + DAL L
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 466 M-----------GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
M R KP+ T G ++H Y +K+ D+ V +
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
AL+ MYAKCG ++ + +VF I ++I+WN +I Y ++G EA + M+ + V P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
++VTFI + +ACSH+G+ ++GL +F M D+ +EP ++HY+C+VDLLGR GR++EA+ +
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 635 VRGMDVKAN-AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGR 693
+ M N AG W SLLGA R+H NLEIGE AA L +LEP+ AS+Y+ L+N+++ AG
Sbjct: 677 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 736
Query: 694 WEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
W++ +R M+++ K PGCSWIE +++ F++ DS + E + L + MR
Sbjct: 737 WDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
Query: 754 KFNVFNMQSVF 764
+ V + V
Sbjct: 797 EGYVPDTSCVL 807
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/543 (21%), Positives = 231/543 (42%), Gaps = 84/543 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PE 126
N++++++ K G ++FD++S+RN VSWN++I+ E A + F M E
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 127 RDNFSWALMITCYTRKGKLE-----KARELLELVPDKLDTACWNAVIAGYAKKGQFSDAE 181
+F+ ++T + E K L +L++ N ++A Y K G+ + ++
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG--------- 232
+ +DLV++N++L+ QN ++ AL + +M + V +S
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 233 FVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
+ +G A L + N+ ++ + ++ RR+FD M + + WNAMI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 293 AAYAQDLQIDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREVY----NQMP 343
A Y+Q+ EA+ LFI M G+ + ++ +R G ++ +
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
+D + LM + G++D A ++F ++ RD + WN+MI G+ S ++AL L +
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 404 MP---------------KKNSVSWNTMISG------------------------------ 418
M K NS++ T++
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 419 -----YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
YA+ G + + +F + ++N+++WN +I + + +A+ L +M +G KP
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY----INDLFVSNALIAMYAKCGRVESA 529
++ TF G ++ Y++K Y +D + ++ + + GR++ A
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYA--CVVDLLGRAGRIKEA 673
Query: 530 EQV 532
Q+
Sbjct: 674 YQL 676
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 188/411 (45%), Gaps = 40/411 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
N N++++++ K GK++ ++ L R+LV+WNT+++ N + EA + M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 125 ---PERDNFSWALMITCYTRKGKLEKAREL--LELVPDKLDTACW--NAVIAGYAKKGQF 177
E D F+ + ++ + L +EL L LD + +A++ Y Q
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLMVSG 232
+VF+ M + + +N+M+AGY+QN AL F M E N + +V
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 233 FVNSGDLSSARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
V SG S + ++ + + T++ ++R GKI A R+F M +++V+W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMPH---------------KDGVSWTTIINGYIRVGKLD 333
N MI Y ++A+ L KM + + ++ TI+ + L
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 334 EAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
+ +E++ ++A + A+ S L+ + G + + K+F+Q+ ++ I WN +I +
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 390 QSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
G EA+DL R M K N V++ ++ + + +G +D IF M+
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 191/441 (43%), Gaps = 55/441 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
+ GK A + + ++ +N ++++ ++ ++ R++FD M R + WN MIAG
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 108 YLHNSMVEEASKLFDVMPER-----DNFSWALMITCYTRKGKLEKARELLELVPDK---L 159
Y N +EA LF M E ++ + A ++ R G + + V +
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
D N ++ Y++ G+ A ++F M +DLV++N+M+ GY + AL KM
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Query: 220 --EKNVVSWNLMVSGFVNS-------------GDLSSARQLFEKIPNPNAVSWV----TM 260
E+ V VS NS L+ +++ N + V +
Sbjct: 499 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL 558
Query: 261 LCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF----IKMPHKDG 316
+ +A+ G + +R++FD +P KNV++WN +I AY EA+ L ++ +
Sbjct: 559 VDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 618
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQM-------PCKDIAAETALMSGLIQTGRVDEASKM 369
V++ ++ G +DE ++ M P D A + G + GR+ EA ++
Sbjct: 619 VTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLG--RAGRIKEAYQL 676
Query: 370 FNQLSTRD---TICWNSMIAGFCQSGRMDEALDL-------FRQMPKKNSVSWNTMISGY 419
N + RD W+S++ + R+ L++ Q+ + + + + Y
Sbjct: 677 MNMMP-RDFNKAGAWSSLLG----ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIY 731
Query: 420 AQAGQMDSAENIFQAMEERNI 440
+ AG D A + + M+E+ +
Sbjct: 732 SSAGLWDKATEVRRNMKEQGV 752
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 20/265 (7%)
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
A + A +IF + + R+ W L+ ++++L +A+ + V M G KPD F
Sbjct: 45 ASAVSGAPSIFIS-QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPAL 103
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGY-INDLFVSNALIAMYAKCGRVESAEQVFTAIECVD 540
++G Q+H ++ K GY ++ + V+N L+ +Y KCG + +VF I +
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 541 LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN------- 593
+SWNSLIS A +AF+ ML E V P T + +++ACS+ +
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ 223
Query: 594 -QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLG 652
L K + F I L Y G++G+L + V+ G + W ++L
Sbjct: 224 VHAYGLRKGELNSFIINTLVAMY-------GKLGKLASS-KVLLGSFGGRDLVTWNTVLS 275
Query: 653 A-CRVHKNLEIGEF-AAMRLSELEP 675
+ C+ + LE E+ M L +EP
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEP 300
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 152/325 (46%), Gaps = 32/325 (9%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V + ++ N+++ ++++ GKI A ++F KM R+LV+WNTMI GY+ + E+A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 118 SKLFDVMP--ER-------------DNFSWALMITCYTRKGKLEKARELLEL-VPDKL-- 159
L M ER ++ + ++ L K +E+ + + L
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM- 218
D A +A++ YAK G + KVF+ +P K+++++N ++ Y +G A+ M
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 219 ---AEKNVVSWNLMVSGFVNSGDLSSARQLFEKI-PN----PNAVSWVTMLCGFARHGKI 270
+ N V++ + + +SG + ++F + P+ P++ + ++ R G+I
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 271 TEARRLFDSMP--CKNVVSWNAMIAA--YAQDLQIDE-AVKLFIKMPHKDGVSWTTIING 325
EA +L + MP +W++++ A +L+I E A + I++ + + N
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 730
Query: 326 YIRVGKLDEAREVYNQMPCKDIAAE 350
Y G D+A EV M + + E
Sbjct: 731 YSSAGLWDKATEVRRNMKEQGVRKE 755
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 302 bits (773), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 331/659 (50%), Gaps = 65/659 (9%)
Query: 164 WNAVIAGYAKKGQFSDAEKVF------NLMPVKDLVSYNSMLAGYTQNGKMGLALH-FFE 216
+N++I GYA G ++A +F + P K + ++ G+ +H
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 217 KMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARR 275
KM K++ N +V + G+L SAR++F+++ N VSW +M+CG+AR +A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 276 LF-----DSMPCKNVVSWNAMIAAYA--QDLQIDEAVKLFIKMP--HKDGVSWTTIINGY 326
LF D N V+ +I+A A +DL+ E V FI+ + + + +++ Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL------------- 373
++ +D A+ ++++ ++ A+ S ++ G EA +FN +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 374 ---------------------------STRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
+ D IC N++I + + R D A +F +M
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 407 KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
K V+WN++++GY + G++D+A F+ M E+NIVSWN++I+G +Q SL+ +A++ M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 467 -GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
+EG D T + ++ YI K+G D+ + L+ M+++CG
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
ESA +F ++ D+ +W + I A+ G A A + F M+ + + PD V F+G L+A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CSH GL QG ++F M++ + P HY C+VDLLGR G LEEA ++ M ++ N
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W SLL ACRV N+E+ +AA ++ L P +Y+ LSN++A AGRW ++ ++R+ M+
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMK 700
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAIS------AHMRDKFNVF 758
+K K PG S I+++ + F S D I+ +L+ +S H+ D NV
Sbjct: 701 EKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVL 759
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 209/484 (43%), Gaps = 101/484 (20%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF--- 121
K+L NS++ +A+ G++ AR++FD+MS+RN+VSW +MI GY ++A LF
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 122 ----DVMP---------------------------------ERDNFSWALMITCYTRKGK 144
+V P E ++ + ++ Y +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 145 LEKARELL-ELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM----PVKDLVSY---- 195
++ A+ L E LD NA+ + Y ++G +A VFNLM D +S
Sbjct: 287 IDVAKRLFDEYGASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 196 -------------------------------NSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N+++ Y + + A F++M+ K VV
Sbjct: 345 SSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV 404
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
+WN +V+G+V +G++ +A + FE +P N VSW T++ G + EA +F SM +
Sbjct: 405 TWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE 464
Query: 285 VVSWNAM----IAAYAQDLQIDEAVKLFIKMPHKDGVSW-----TTIINGYIRVGKLDEA 335
V+ + + IA+ L + K K+G+ TT+++ + R G + A
Sbjct: 465 GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Query: 336 REVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQS 391
++N + +D++A TA + + G + A ++F+ + + D + + +
Sbjct: 525 MSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHG 584
Query: 392 GRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNS 445
G + + ++F M K + VS + M+ +AG ++ A + + M E N V WNS
Sbjct: 585 GLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNS 644
Query: 446 LITG 449
L+
Sbjct: 645 LLAA 648
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 198/481 (41%), Gaps = 95/481 (19%)
Query: 253 NAVSWVTML----CGFARHGKITEARRLFD-SMPCKNVVSWNAMIAAYAQDLQIDEAVKL 307
N VS +T L C ++ A+ +F+ S +N++I YA +EA+ L
Sbjct: 62 NDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILL 121
Query: 308 FIKMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQ 359
F++M + D ++ ++ + +++ + KD+ + +L+ +
Sbjct: 122 FLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT----- 414
G +D A K+F+++S R+ + W SMI G+ + +A+DLF +M + V+ N+
Sbjct: 182 CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 415 -----------------------------------MISGYAQAGQMDSAENIFQAMEERN 439
++ Y + +D A+ +F N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
+ N++ + +++ L +AL LM G +PD+ + G H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIE 559
Y+L++G+ + + NALI MY KC R ++A ++F + +++WNS+++GY NG
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 560 AFKAFKQMLSEEVV--------------------------------PDQVTFIGMLSACS 587
A++ F+ M + +V D VT + + SAC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 588 HAGLANQGLDLFKCM---VEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVK 641
H G LDL K + +E I+ + LVD+ R G E A FN + DV
Sbjct: 482 HLG----ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 642 A 642
A
Sbjct: 538 A 538
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 25/242 (10%)
Query: 394 MDEALDLFRQMPKK---NSVSWNT-MISGYAQAGQMDS---AENIFQAMEERNIV-SWNS 445
+DE R + K+ N VS T +++ + G +S A+ +F+ E +NS
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
LI G+ + L +A+ + M G PD+ TF G Q+H I+K G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
Y DLFV N+L+ YA+CG ++SA +VF + +++SW S+I GYA +A +A F
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 566 QML-SEEVVPDQVTFIGMLSACS-----------HAGLANQGLDLFKCMVEDFAIEPLAE 613
+M+ EEV P+ VT + ++SAC+ +A + N G++ V D + L +
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE-----VNDLMVSALVD 279
Query: 614 HY 615
Y
Sbjct: 280 MY 281
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 283/518 (54%), Gaps = 43/518 (8%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----------------KDG 316
A R+F+ + NV N++I A+AQ+ Q +A +F +M G
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 317 VSWTTI-----------------------INGYIRVGKLD--EAREVYNQMPCKDIAAET 351
SW + I+ Y R G L +A +++ +M +D +
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS 411
+++ GL++ G + +A ++F+++ RD I WN+M+ G+ + M +A +LF +MP++N+VS
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249
Query: 412 WNTMISGYAQAGQMDSAENIFQAME--ERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
W+TM+ GY++AG M+ A +F M +N+V+W +I G+ + L +A + + M
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
G K D + +G ++H + +S ++ +V NAL+ MYAKCG ++ A
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 530 EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHA 589
VF I DL+SWN+++ G ++G+ EA + F +M E + PD+VTFI +L +C+HA
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 590 GLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
GL ++G+D F M + + + P EHY CLVDLLGR+GRL+EA VV+ M ++ N +WG+
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 650 LLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
LLGACR+H ++I + L +L+P + NY LSN++A A WE V +R M+
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 710 GKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAI 747
K G S +E+++ I F D + + I +L ++
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 210/423 (49%), Gaps = 31/423 (7%)
Query: 55 AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMV 114
AVRVF+ N+ NS+I A+N + A +F +M + L + N L
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 115 EEASKLFDVMPER--------DNFSWALMITCYTRKGKL--EKARELLELVPDKLDTACW 164
+ + +M D + +I CY+R G L A +L E + ++ DT W
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER-DTVSW 188
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N+++ G K G+ DA ++F+ MP +DL+S+N+ML GY + +M A FEKM E+N V
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNP--NAVSWVTMLCGFARHGKITEARRLFDSMPC 282
SW+ MV G+ +GD+ AR +F+K+P P N V+W ++ G+A G + EA RL D M
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 283 K----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIING----YIRVGKLDE 334
+ + +++AA + + +++ + + S ++N Y + G L +
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQ 390
A +V+N +P KD+ + ++ GL G EA ++F+++ D + + +++
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 428
Query: 391 SGRMDEALDLFRQMPKKNSV-----SWNTMISGYAQAGQMDSAENIFQAME-ERNIVSWN 444
+G +DE +D F M K + + ++ + G++ A + Q M E N+V W
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 488
Query: 445 SLI 447
+L+
Sbjct: 489 ALL 491
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 24/353 (6%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
G LG V +A+++F ++ V++NSM+ K G++ DAR+LFD+M QR+L+SWNTM+
Sbjct: 166 GGLG-VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLD 224
Query: 107 GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVP-DKLDTACWN 165
GY + +A +LF+ MPER+ SW+ M+ Y++ G +E AR + + +P + W
Sbjct: 225 GYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWT 284
Query: 166 AVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
+IAGYA+KG +A+++ + M D + S+LA T++G + L + +
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 222 NVVS----WNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLF 277
N+ S N ++ + G+L A +F IP + VSW TML G HG EA LF
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 278 DSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKM-------PHKDGVSWTTIINGY 326
M + + V++ A++ + IDE + F M P + + +++
Sbjct: 405 SRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVE--HYGCLVDLL 462
Query: 327 IRVGKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTRDT 378
RVG+L EA +V MP + ++ AL+ VD A ++ + L D
Sbjct: 463 GRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDP 515
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 223/464 (48%), Gaps = 73/464 (15%)
Query: 31 IGGKHVFNKN-QQIIHLGKLGKVEEA-VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQ 88
+ + +F + Q + L +V++ ++ +H++L +IS + + + A +
Sbjct: 13 VSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVR 72
Query: 89 LFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGK 144
+F+++ + N+ N++I + NS +A +F M DNF++ ++ + +
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQS- 131
Query: 145 LEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQ 204
W V+ K + EK L D+ N+++ Y++
Sbjct: 132 -------------------WLPVV-----KMMHNHIEK---LGLSSDIYVPNALIDCYSR 164
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGF 264
G +G+ A +LFEK+ + VSW +ML G
Sbjct: 165 CGGLGV-----------------------------RDAMKLFEKMSERDTVSWNSMLGGL 195
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIIN 324
+ G++ +ARRLFD MP ++++SWN M+ YA+ ++ +A +LF KMP ++ VSW+T++
Sbjct: 196 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVM 255
Query: 325 GYIRVGKLDEAREVYNQM--PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DT 378
GY + G ++ AR ++++M P K++ T +++G + G + EA ++ +Q+ D
Sbjct: 256 GYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDA 315
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQA 434
S++A +SG + + + + + N+ N ++ YA+ G + A ++F
Sbjct: 316 AAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND 375
Query: 435 MEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ ++++VSWN+++ G + +A++ M REG +PD+ TF
Sbjct: 376 IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF 419
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 166/328 (50%), Gaps = 23/328 (7%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N + L K G++ +A R+F ++L+++N+M+ +A+ ++S A +LF+KM +RN V
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVM--PERDNFSWALMITCYTRKGKLEKARELL-ELVP 156
SW+TM+ GY +E A +FD M P ++ +W ++I Y KG L++A L+ ++V
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 157 D--KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVS----YNSMLAGYTQNGKMGL 210
K D A +++A + G S ++ +++ +L S N++L Y + G +
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 211 ALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR 266
A F + +K++VSWN M+ G G A +LF ++ P+ V+++ +LC
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 428
Query: 267 HGKITEARRLFDSMP-----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-WT 320
G I E F SM V + ++ + ++ EA+K+ MP + V W
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 488
Query: 321 TIINGYIRVGKLDEAREVYNQM----PC 344
++ ++D A+EV + + PC
Sbjct: 489 ALLGACRMHNEVDIAKEVLDNLVKLDPC 516
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+IS + Q + A +F ++E N+ NSLI QNS + A M R G D
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFAD 116
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG--RVESAEQV 532
T+ V +H +I K G +D++V NALI Y++CG V A ++
Sbjct: 117 NFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F + D +SWNS++ G G +A + F +M D +++ ML +
Sbjct: 177 FEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREM 232
Query: 593 NQGLDLFKCMVE 604
++ +LF+ M E
Sbjct: 233 SKAFELFEKMPE 244
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 33 GKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDK 92
G + + N + K G +++A VF++ K+LV++N+M+ +G +A +LF +
Sbjct: 347 GSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSR 406
Query: 93 MSQRNL----VSWNTMIAGYLHNSMVEEA-------SKLFDVMPERDNFSWALMITCYTR 141
M + + V++ ++ H +++E K++D++P+ +++ ++ R
Sbjct: 407 MRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHY--GCLVDLLGR 464
Query: 142 KGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFN 185
G+L++A ++++ +P + + W A++ + A++V +
Sbjct: 465 VGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
QLH I++ DL ++ LI+ + C + A +VF ++ ++ NSLI +A N
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNS 96
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM---VEDFAIEPLA 612
+AF F +M + D T+ +L ACS L + K M +E +
Sbjct: 97 QPYQAFFVFSEMQRFGLFADNFTYPFLLKACS----GQSWLPVVKMMHNHIEKLGLSSDI 152
Query: 613 EHYSCLVDLLGRMGRL--EEAFNVVRGMDVKANAGLWGSLLGA 653
+ L+D R G L +A + M + W S+LG
Sbjct: 153 YVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGG 194
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 200/697 (28%), Positives = 350/697 (50%), Gaps = 91/697 (13%)
Query: 85 DARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA----SKLFDVMPERDNFSWALMITCYT 140
DARQ+F +M++R+L WNT++ EE S +F + DNF+ +
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV------ 65
Query: 141 RKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLA 200
L+ EL E+ + +I G+ KK ++ DL +S++
Sbjct: 66 ---ALKACGELREV--------NYGEMIHGFVKK----------DVTLGSDLYVGSSLIY 104
Query: 201 GYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAV 255
Y + G+M AL F+++ + ++V+W+ MVSGF +G A + F ++ P+ V
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 256 SWVTMLC----------GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAV 305
+ +T++ G HG + RR F + ++ N+++ YA+ EAV
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVI--RRGFSN----DLSLVNSLLNCYAKSRAFKEAV 218
Query: 306 KLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVD- 364
LF + KD +SW+T+I Y++ G EA V+N M A + ++Q
Sbjct: 219 NLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAH 278
Query: 365 --EASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMIS 417
E + ++L+ R + +++ + + +EA +F ++P+K+ VSW +IS
Sbjct: 279 DLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALIS 338
Query: 418 GYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
G+ G M R+I ++ ++ L+N+ DA+ + ++G
Sbjct: 339 GFTLNG-----------MAHRSIEEFSIML---LENNTRPDAILMVKVLG---------- 374
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
+ H Y++K G+ ++ F+ +L+ +Y++CG + +A +VF I
Sbjct: 375 ------SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 538 CVDLISWNSLISGYALNGYAIEAFKAFKQML-SEEVVPDQVTFIGMLSACSHAGLANQGL 596
D + W SLI+GY ++G +A + F M+ S EV P++VTF+ +LSACSHAGL ++GL
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+FK MV D+ + P EHY+ LVDLLGR+G L+ A + + M + G+LLGACR+
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRI 548
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
H+N E+ E A +L ELE ++A Y+ +SN++ G WE VE+LR ++ + K S
Sbjct: 549 HQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAES 608
Query: 717 WIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
IE++ ++ F++DD E + +L + HM++
Sbjct: 609 LIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKE 645
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 200/415 (48%), Gaps = 52/415 (12%)
Query: 62 TIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF 121
T+ +L +S+I ++ K G++ +A ++FD++ + ++V+W++M++G+ N +A + F
Sbjct: 91 TLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFF 150
Query: 122 -------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL-------DTACWNAV 167
DV P+R +IT + KL +R L V + D + N++
Sbjct: 151 RRMVMASDVTPDR-----VTLITLVSACTKLSNSR-LGRCVHGFVIRRGFSNDLSLVNSL 204
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNV 223
+ YAK F +A +F ++ KD++S+++++A Y QNG AL F M E NV
Sbjct: 205 LNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNV 264
Query: 224 VSWNLMVSGFVNSGDLSSARQLFE---------KIPNPNAVSWVTMLCGFARHGKITEAR 274
+ ++ + DL R+ E ++ A+ + M C F+ EA
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC-FSPE----EAY 319
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM-----PHKDGVSWTTIINGYIRV 329
+F +P K+VVSW A+I+ + + +++ F M D + ++ +
Sbjct: 320 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 379
Query: 330 GKLDEAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQLSTRDTICWNSMI 385
G L++A+ ++ + + + + L++ G + ASK+FN ++ +DT+ W S+I
Sbjct: 380 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 439
Query: 386 AGFCQSGRMDEALDLFRQM-----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
G+ G+ +AL+ F M K N V++ +++S + AG + IF+ M
Sbjct: 440 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 191/464 (41%), Gaps = 44/464 (9%)
Query: 12 GENHKIKMTSMKHKLTIGSIG-GKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTY 70
GE ++ M H + G ++ + I K G++ EA+R+F ++VT+
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWN-----TMIAG--YLHNSMVEEASKLFDV 123
+SM+S F KNG A + F +M + V+ + T+++ L NS + F +
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 124 MPERDNFSWAL-----MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFS 178
R FS L ++ CY + ++A L +++ +K D W+ VIA Y + G +
Sbjct: 191 ---RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-DVISWSTVIACYVQNGAAA 246
Query: 179 DAEKVFNLM------PVKDLVSYNSMLAGYTQNGKMGLALH--FFEKMAEKNVVSWNLMV 230
+A VFN M P V + + G H K E V +V
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 231 SGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA 290
++ A +F +IP + VSWV ++ GF +G + F M +N +A
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 291 M----IAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIING-----YIRVGKLDEAREVYNQ 341
+ + +L E K F K G I Y R G L A +V+N
Sbjct: 367 ILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNG 426
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN-----SMIAGFCQSGRMDE 396
+ KD T+L++G G+ +A + FN + + N S+++ +G + E
Sbjct: 427 IALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHE 486
Query: 397 ALDLFRQMPKKNSVSWN-----TMISGYAQAGQMDSAENIFQAM 435
L +F+ M ++ N ++ + G +D+A I + M
Sbjct: 487 GLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 168/371 (45%), Gaps = 53/371 (14%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R FSN +L NS+++ +AK+ +A LF +++++++SW+T+IA Y+ N E
Sbjct: 192 RGFSN----DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 117 ASKLFDVMPERDNFSWALMITCYTR----KGKLEKARELLELVPDK---LDTACWNAVIA 169
A +F+ M + + C + LE+ R+ EL K + A++
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM 229
Y K +A VF+ +P KD+VS+ ++++G+T NG MA +++ +++M
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG-----------MAHRSIEEFSIM 356
Query: 230 VSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN 289
L E P+A+ V +L + G + +A + F S K N
Sbjct: 357 ---------------LLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSN 400
Query: 290 AMIAA-----YAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM-P 343
I A Y++ + A K+F + KD V WT++I GY GK +A E +N M
Sbjct: 401 PFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVK 460
Query: 344 CKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTRDTICWN-----SMIAGFCQSGRM 394
++ +++S G + E ++F + + N ++ + G +
Sbjct: 461 SSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDL 520
Query: 395 DEALDLFRQMP 405
D A+++ ++MP
Sbjct: 521 DTAIEITKRMP 531
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 188/573 (32%), Positives = 307/573 (53%), Gaps = 26/573 (4%)
Query: 158 KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
KLD+A +N ++ GY + + DA K+F++MP + VSY +++ GY QN + A+ F +
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 218 MAEK----NVVSWNLMVSGFVNSGDLSSARQLFE-----KIPNPNAVSWVTMLCGFARHG 268
M N V+ ++S + G + R L K+ VS +L +
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVS-TNLLHMYCLCL 222
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIR 328
+ +AR+LFD MP +N+V+WN M+ Y++ I++A +LF ++ KD VSW T+I+G +R
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLR 282
Query: 329 VGKLDEAREVYNQM-PCKDIAAETALMSGLIQTGRVDEASK---MFNQLSTRDTICWN-- 382
+LDEA Y +M C +E ++ L + R +SK + + R C++
Sbjct: 283 KNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFL 342
Query: 383 --SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
++I + S + AL F K + S N +I+G+ + G ++ A +F +++I
Sbjct: 343 QATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDI 402
Query: 441 VSWNSLITGFLQN---SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
SWN++I+G+ Q+ L + ++ KPD T + G +
Sbjct: 403 FSWNAMISGYAQSLSPQLALHLFREMI--SSSQVKPDAITMVSVFSAISSLGSLEEGKRA 460
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA---IECVDLISWNSLISGYALN 554
H+Y+ S + ++ A+I MYAKCG +E+A +F I + WN++I G A +
Sbjct: 461 HDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATH 520
Query: 555 GYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEH 614
G+A A + + S + P+ +TF+G+LSAC HAGL G F+ M D IEP +H
Sbjct: 521 GHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKH 580
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELE 674
Y C+VDLLG+ GRLEEA +++ M VKA+ +WG LL A R H N+EI E AA L+ ++
Sbjct: 581 YGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAID 640
Query: 675 PHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
P + + LSN++A+AGRWE+V +R MR +
Sbjct: 641 PSHGGCKVMLSNVYADAGRWEDVALVREEMRTR 673
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/568 (25%), Positives = 258/568 (45%), Gaps = 78/568 (13%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
RV + + N NS+++++AK ++DA +F ++ + S+N M+ GY+ + + +
Sbjct: 66 RVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWD 125
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAK 173
A KLFDVMPER S+ +I Y + + +A EL + + L+ VI+ +
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 174 KGQFSDAEKVFNL-----MPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL 228
G D + +L + + VS N +L Y + A F++M E+N+V+WN+
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTN-LLHMYCLCLCLKDARKLFDEMPERNLVTWNV 244
Query: 229 MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-PC---KN 284
M++G+ +G + A +LF++I + VSW TM+ G R ++ EA + M C +
Sbjct: 245 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSW----TTIINGYIRVGKLDEAREVYN 340
V +++A A+ + + ++L + + + TII+ Y + A + +
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 364
Query: 341 QMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
IA+ AL++G ++ G V++A ++F+Q +D WN+MI+G+ QS AL L
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHL 424
Query: 401 FRQMPKKNSVSWN--TMIS--------------------------------------GYA 420
FR+M + V + TM+S YA
Sbjct: 425 FREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYA 484
Query: 421 QAGQMDSAENIFQA---MEERNIVSWNSLITGF-------LQNSLYFDALKSLVLMGREG 470
+ G +++A NIF + I WN++I G L LY D L+SL +
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD-LQSLPI----- 538
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS--GYINDLFVSNALIAMYAKCGRVES 528
KP+ TF ++G E +KS G D+ ++ + K GR+E
Sbjct: 539 -KPNSITFVGVLSACCHAGLVELGKTYFES-MKSDHGIEPDIKHYGCMVDLLGKAGRLEE 596
Query: 529 AEQVFTAIEC-VDLISWNSLISGYALNG 555
A+++ + D++ W L+S +G
Sbjct: 597 AKEMIKKMPVKADVMIWGMLLSASRTHG 624
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 192/408 (47%), Gaps = 37/408 (9%)
Query: 52 VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN 111
+++A ++F +NLVT+N M++ ++K G I A +LFD+++++++VSW TMI G L
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 112 SMVEEASKLFDVMPERD-NFSWALMITCYTRKGKLEKARELLEL----VPDKLDTACWN- 165
+ ++EA + M S +M+ + + + + L+L V D C++
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD--CYDF 341
Query: 166 ---AVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
+I YA A + F + S N+++AG+ +NG + A F++ +K+
Sbjct: 342 LQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKD 401
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLF 277
+ SWN M+SG+ S A LF ++ + P+A++ V++ + G + E +R
Sbjct: 402 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 461
Query: 278 DSM------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS---WTTIINGYIR 328
D + P N+ + A+I YA+ I+ A+ +F + + + W II G
Sbjct: 462 DYLNFSTIPPNDNLTA--AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Query: 329 VGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLST-----RDTI 379
G A ++Y+ + I + ++S G V+ F + + D
Sbjct: 520 HGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIK 579
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAGQMD 426
+ M+ ++GR++EA ++ ++MP K V W ++S G ++
Sbjct: 580 HYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 125/294 (42%), Gaps = 40/294 (13%)
Query: 350 ETALMSGL--------IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
E AL+S L + GR + + L + IC NS++ + + + +A +F
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYIC-NSVLNMYAKCRLLADAESVF 99
Query: 402 RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALK 461
R K +S S+N M+ GY ++ ++ A +F M ER+ VS+ +LI G+ QN+ + +A++
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
M G ++ T L +K +FVS L+ MY
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 219
Query: 522 KC-------------------------------GRVESAEQVFTAIECVDLISWNSLISG 550
C G +E AE++F I D++SW ++I G
Sbjct: 220 LCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDG 279
Query: 551 YALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
EA + +ML + P +V + +LSA + + +++GL L +V+
Sbjct: 280 CLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 23/258 (8%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
H+ ++N I K G VE+A VF T K++ ++N+MIS +A++ A LF +M
Sbjct: 370 HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 95 QRNLVSWN--TMIAGYLHNS---MVEEASKL-----FDVMPERDNFSWALMITCYTRKGK 144
+ V + TM++ + S +EE + F +P DN + A +I Y + G
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLT-AAIIDMYAKCGS 488
Query: 145 LEKARELLELVPDKLDTAC--WNAVIAGYAKKGQFSDAEKVFN---LMPVK-DLVSYNSM 198
+E A + + + WNA+I G A G A +++ +P+K + +++ +
Sbjct: 489 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 199 LAGYTQNGKMGLALHFFEKMA-----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NP 252
L+ G + L +FE M E ++ + MV +G L A+++ +K+P
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 253 NAVSWVTMLCGFARHGKI 270
+ + W +L HG +
Sbjct: 609 DVMIWGMLLSASRTHGNV 626
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 298 bits (763), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 208/755 (27%), Positives = 370/755 (49%), Gaps = 53/755 (7%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQL---FDK 92
++Q +L + G + EA + + + TY ++ +G I R L F
Sbjct: 50 DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGL 109
Query: 93 MSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL 152
++ ++ +++ Y + +A K+FD M ER+ F+W+ MI Y+R+ + + +L
Sbjct: 110 FTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 153 EL------VPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSY-----NSMLAG 201
L +PD + ++ G A G +A KV + + +K +S NS+LA
Sbjct: 170 RLMMKDGVLPDDF---LFPKILQGCANCGDV-EAGKVIHSVVIKLGMSSCLRVSNSILAV 225
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSW 257
Y + G++ A FF +M E++V++WN ++ + +G A +L +++ +P V+W
Sbjct: 226 YAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 258 VTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKM-- 311
++ G+ + GK A L M +V +W AMI+ + +A+ +F KM
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 312 --PHKDGVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDE 365
+ V+ + ++ + +++ EV++ D+ +L+ + G++++
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQ 421
A K+F+ + +D WNSMI G+CQ+G +A +LF +M + N ++WNTMISGY +
Sbjct: 406 ARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Query: 422 AGQMDSAENIFQAME-----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
G A ++FQ ME +RN +WN +I G++QN +AL+ M P+
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T ++ ++H +L+ V NAL YAK G +E + +F +
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGM 585
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
E D+I+WNSLI GY L+G A F QM ++ + P++ T ++ A G ++G
Sbjct: 586 ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGK 645
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+F + D+ I P EH S +V L GR RLEEA ++ M++++ +W S L CR+
Sbjct: 646 KVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRI 705
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMH---AEAGRWEEVERLRVLMRDKRAGKLP 713
H ++++ AA L LEP N + +S ++ A+ GR E + R RD K
Sbjct: 706 HGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPR---RDNLLKKPL 762
Query: 714 GCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAIS 748
G SWIEV+N I F + D +L + + ++ +S
Sbjct: 763 GQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMS 797
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 148/615 (24%), Positives = 280/615 (45%), Gaps = 85/615 (13%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
VF + + + K G + +A +VF + +NL T+++MI +++ + + +LF M +
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 96 RNLVSWNTMIAGYLH---NSMVEEASKLFDVMPERDNFSWAL-----MITCYTRKGKLEK 147
++ + + L N EA K+ + + S L ++ Y + G+L+
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 148 ARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYT 203
A + + ++ D WN+V+ Y + G+ +A ++ M + LV++N ++ GY
Sbjct: 235 ATKFFRRMRER-DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 204 QNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAV 255
Q GK A+ +KM +V +W M+SG +++G A +F K+ PNAV
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 256 SWVT-----------------------------MLCG------FARHGKITEARRLFDSM 280
+ ++ +L G +++ GK+ +AR++FDS+
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 281 PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAR 336
K+V +WN+MI Y Q +A +LF +M + ++W T+I+GYI+ G EA
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAM 473
Query: 337 EVYNQMP-----CKDIAAETALMSGLIQTGRVDEASKMFNQ------LSTRDTI------ 379
+++ +M ++ A +++G IQ G+ DEA ++F + + TI
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERN 439
C N + A R L R + ++V N + YA++G ++ + IF ME ++
Sbjct: 534 CANLLGAKMV---REIHGCVLRRNLDAIHAVK-NALTDTYAKSGDIEYSRTIFLGMETKD 589
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
I++WNSLI G++ + Y AL M +G P++ T G ++
Sbjct: 590 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF- 648
Query: 500 YILKSGY--INDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYALNGY 556
Y + + Y I L +A++ +Y + R+E A Q + + W S ++G ++G
Sbjct: 649 YSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGD 708
Query: 557 AIEAFKAFKQMLSEE 571
A A + + S E
Sbjct: 709 IDMAIHAAENLFSLE 723
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/487 (32%), Positives = 264/487 (54%), Gaps = 40/487 (8%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-----DGVSWTTIINGYI 327
A RLF+ + NV +N++I AY + + ++++ ++ K D ++ +
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 328 RVGKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNS 383
+G ++V+ + P + E AL+ ++ + +A K+F+++ RD
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV----- 175
Query: 384 MIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSW 443
+SWN+++SGYA+ GQM A+ +F M ++ IVSW
Sbjct: 176 --------------------------ISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSW 209
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
++I+G+ Y +A+ M G +PD+ + ++G +H Y +
Sbjct: 210 TAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAER 269
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKA 563
G++ V NALI MY+KCG + A Q+F +E D+ISW+++ISGYA +G A A +
Sbjct: 270 RGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIET 329
Query: 564 FKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
F +M +V P+ +TF+G+LSACSH G+ +GL F M +D+ IEP EHY CL+D+L
Sbjct: 330 FNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLA 389
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYIT 683
R G+LE A + + M +K ++ +WGSLL +CR NL++ A L ELEP + NY+
Sbjct: 390 RAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVL 449
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQII 743
L+N++A+ G+WE+V RLR ++R++ K PG S IEV N +Q F+S D+ + I I+
Sbjct: 450 LANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIV 509
Query: 744 LNAISAH 750
L ++H
Sbjct: 510 LQLFTSH 516
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 184/387 (47%), Gaps = 51/387 (13%)
Query: 82 KISD---ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM-------PERDNF- 130
KI D A +LF+++S N+ +N++I Y HNS+ + +++ + P+R F
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFP 113
Query: 131 ----SWALMITCYTRK---GKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKV 183
S A + +CY K G L K +V + NA+I Y K DA KV
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE-------NALIDMYMKFDDLVDAHKV 166
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSAR 243
F+ M +D++S+NS+L+GY + G+M A F M +K +VSW M+SG+ G A
Sbjct: 167 FDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAM 226
Query: 244 QLFEKIP----NPNAVSWVTMLCGFARHGKIT--------EARRLFDSMPCKNVVSWNAM 291
F ++ P+ +S +++L A+ G + RR F K NA+
Sbjct: 227 DFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGF----LKQTGVCNAL 282
Query: 292 IAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE- 350
I Y++ I +A++LF +M KD +SW+T+I+GY G A E +N+M +
Sbjct: 283 IEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNG 342
Query: 351 ---TALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFR 402
L+S G E + F+ + I + +I ++G+++ A+++ +
Sbjct: 343 ITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITK 402
Query: 403 QMP-KKNSVSWNTMISGYAQAGQMDSA 428
MP K +S W +++S G +D A
Sbjct: 403 TMPMKPDSKIWGSLLSSCRTPGNLDVA 429
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 149/313 (47%), Gaps = 38/313 (12%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
++VT N++I ++ K + DA ++FD+M +R+++SWN++++GY +++A LF +M
Sbjct: 143 HVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLML 202
Query: 126 ERDNFSWALMITCYTRKGKLEKAREL---LELVPDKLDTACWNAVIAGYAKKGQFSDAEK 182
++ SW MI+ YT G +A + ++L + D +V+ A+ G +
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKW 262
Query: 183 VFNLMPVKDLVSY----NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD 238
+ + + N+++ Y++ G + A+ F +M K+V+SW+ M+SG+ G+
Sbjct: 263 IHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGN 322
Query: 239 LSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
A + F ++ PN ++++ +L + G E R FD M
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMM-------------- 368
Query: 295 YAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK-DIAAETAL 353
QD QI+ ++ + +I+ R GKL+ A E+ MP K D +L
Sbjct: 369 -RQDYQIEPKIE-----------HYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416
Query: 354 MSGLIQTGRVDEA 366
+S G +D A
Sbjct: 417 LSSCRTPGNLDVA 429
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 43/318 (13%)
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL-VLMGREGKKPDQSTFXXXXX 483
MD A +F + N+ +NS+I + NSLY D ++ L+ + + PD+ TF
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS 543
+G Q+H ++ K G + NALI MY K + A +VF + D+IS
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 544 WNSLISGYA--------------------------LNGYA-----IEAFKAFKQMLSEEV 572
WNSL+SGYA ++GY +EA F++M +
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 573 VPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA- 631
PD+++ I +L +C+ G G E + L+++ + G + +A
Sbjct: 238 EPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 632 --FNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFAAMRLSELEPHNASNYITLSNM 687
F + G DV + W +++ H N I F M+ ++++P N ++ L +
Sbjct: 297 QLFGQMEGKDVIS----WSTMISGYAYHGNAHGAIETFNEMQRAKVKP-NGITFLGLLSA 351
Query: 688 HAEAGRWEEVERLRVLMR 705
+ G W+E R +MR
Sbjct: 352 CSHVGMWQEGLRYFDMMR 369
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 201/692 (29%), Positives = 332/692 (47%), Gaps = 120/692 (17%)
Query: 167 VIAGYAKKGQFSDAEKVFNLMPVKDLVSY--NSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
+I+ Y G S A + P D Y NS++ Y NG L+ F M + +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM---HSL 121
Query: 225 SWN----LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVT-----------MLCGFARHGK 269
SW F G++SS R + +A+S VT ++ ++R
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCG----ESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTI------- 322
+++AR++FD M +VVSWN++I +YA+ + A+++F +M ++ G I
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 323 ---------------------------------INGYIRVGKLDEAREVYNQMPCKDIAA 349
++ Y + G +DEA V++ M KD+ +
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 350 ETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQM- 404
A+++G Q GR ++A ++F ++ D + W++ I+G+ Q G EAL + RQM
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 405 ---PKKNSVSWNTMISG------------------------------------------Y 419
K N V+ +++SG Y
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 420 AQAGQMDSAENIFQAM--EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG--KKPDQ 475
A+ ++D+A +F ++ +ER++V+W +I G+ Q+ AL+ L M E +P+
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGY-INDLFVSNALIAMYAKCGRVESAEQVFT 534
T ++G Q+H Y L++ LFVSN LI MYAKCG + A VF
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ + ++W SL++GY ++GY EA F +M D VT + +L ACSH+G+ +Q
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 595 GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
G++ F M F + P EHY+CLVDLLGR GRL A ++ M ++ +W + L C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
Query: 655 RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
R+H +E+GE+AA +++EL ++ +Y LSN++A AGRW++V R+R LMR K K PG
Sbjct: 658 RIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717
Query: 715 CSWIE-VQNQIQCFLSDDSGRLRPETIQIILN 745
CSW+E ++ F+ D + E Q++L+
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLD 749
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 210/434 (48%), Gaps = 49/434 (11%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
+ G+ A+ + + I N+ N++++++++ +SDAR++FD+MS ++VSWN++I
Sbjct: 144 RCGESAHALSLVTGFI-SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIES 202
Query: 108 YLHNSMVEEASKLFDVMPER-----DNFSWALMITCYTRKGKLEKARELL------ELVP 156
Y + A ++F M DN + ++ G ++L E++
Sbjct: 203 YAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ 262
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
+ C ++ YAK G +A VF+ M VKD+VS+N+M+AGY+Q G+ A+ FE
Sbjct: 263 NMFVGNC---LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319
Query: 217 KMAEK----NVVSWNLMVSGFVNSG----DLSSARQLFEKIPNPNAVSWVTMLCGFARHG 268
KM E+ +VV+W+ +SG+ G L RQ+ PN V+ +++L G A G
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG 379
Query: 269 KITEARRLF------------DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-- 314
+ + + + +N+V N +I YA+ ++D A +F + K
Sbjct: 380 ALMHGKEIHCYAIKYPIDLRKNGHGDENMV-INQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 315 DGVSWTTIINGYIRVGKLDEAREVYNQMPCKD-------IAAETALMS----GLIQTGRV 363
D V+WT +I GY + G ++A E+ ++M +D AL++ ++ G+
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 364 DEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAG 423
A + NQ + N +I + + G + +A +F M KN V+W ++++GY G
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHG 558
Query: 424 QMDSAENIFQAMEE 437
+ A IF M
Sbjct: 559 YGEEALGIFDEMRR 572
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 204/435 (46%), Gaps = 52/435 (11%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
LGK V S I +N+ N ++ ++AK G + +A +F MS +++VSWN M+AGY
Sbjct: 247 LGKQLHCFAVTSEMI-QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 109 LHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKG----KLEKARELLE--LVPDK 158
E+A +LF+ M E D +W+ I+ Y ++G L R++L + P++
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKV--FNLMPVKDL---------VSYNSMLAGYTQNGK 207
+ +V++G A G +++ + + DL + N ++ Y + K
Sbjct: 366 VTLI---SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 208 MGLALHFFEKMA--EKNVVSWNLMVSGFVNSGDLSSARQLFEKI--------PNPNAVSW 257
+ A F+ ++ E++VV+W +M+ G+ GD + A +L ++ PN +S
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 258 VTMLC---GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK 314
+ C R GK A L + + N +I YA+ I +A +F M K
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 315 DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI------QTGRVDEASK 368
+ V+WT+++ GY G +EA ++++M + I + ++ L+ +G +D+ +
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEM--RRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 369 MFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQA 422
FN++ T + + ++ ++GR++ AL L +MP + V W +S
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH 660
Query: 423 GQMDSAENIFQAMEE 437
G+++ E + + E
Sbjct: 661 GKVELGEYAAEKITE 675
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 212/470 (45%), Gaps = 46/470 (9%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYN 71
GE ++ H L++ + +VF N + + + +A +VF ++V++N
Sbjct: 138 GEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWN 197
Query: 72 SMISVFAKNGKISDARQLFDKMSQR------NLVSWNTM-IAGYLHNSMVEEASKLFDVM 124
S+I +AK GK A ++F +M+ N+ N + L + + F V
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVT 257
Query: 125 PE--RDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEK 182
E ++ F ++ Y + G +++A + + K D WNA++AGY++ G+F DA +
Sbjct: 258 SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVR 316
Query: 183 VFNLMPVK----DLVSYNSMLAGYTQNG----KMGLALHFFEKMAEKNVVSWNLMVSGFV 234
+F M + D+V++++ ++GY Q G +G+ + N V+ ++SG
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 235 NSGDLSSARQLFE---KIP---NPNAVSWVTMLCG-----FARHGKITEARRLFDSMPCK 283
+ G L +++ K P N M+ +A+ K+ AR +FDS+ K
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 284 --NVVSWNAMIAAYAQDLQIDEAVKLFIKM--------PHKDGVSWTTIIN---GYIRVG 330
+VV+W MI Y+Q ++A++L +M P+ +S + +R+G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 331 KLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQ 390
K A + NQ + L+ + G + +A +F+ + ++ + W S++ G+
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 391 SGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
G +EAL +F +M K + V+ ++ + +G +D F M+
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 138/345 (40%), Gaps = 42/345 (12%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP- 125
L N +I ++AK G ISDAR +FD M +N V+W +++ GY + EEA +FD M
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 126 ---ERDNFSWALMITCYTRKGKLEKARE-------LLELVPDKLDTACWNAVIAGYAKKG 175
+ D + +++ + G +++ E + + P AC ++ + G
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC---LVDLLGRAG 629
Query: 176 QFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGLALHFFEKMAE---KNVVSWNLMVS 231
+ + A ++ MP++ V + + L+ +GK+ L + EK+ E + S+ L+ +
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689
Query: 232 GFVNSG---DLSSARQLFEK--IPNPNAVSWV-------TMLCGFARHGKITEARR-LFD 278
+ N+G D++ R L + SWV T G H E + L D
Sbjct: 690 LYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLD 749
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSW---TTIINGYIRVGKLDEA 335
M + + D+ +E L + K +++ TT IR+ K
Sbjct: 750 HMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITK---- 805
Query: 336 REVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
N C D MS +I + S F+ C
Sbjct: 806 ----NLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSC 846
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 16/186 (8%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
+F N I K G + +A VF N + KN VT+ S+++ + +G +A +FD+M +
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 96 RNL----VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLE 146
V+ ++ H+ M+++ + F+ M S +A ++ R G+L
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 147 KARELLELVPDKLDTACWNAV-----IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG 201
A L+E +P + W A I G + G+++ AEK+ L D SY +
Sbjct: 633 AALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA-AEKITELASNHD-GSYTLLSNL 690
Query: 202 YTQNGK 207
Y G+
Sbjct: 691 YANAGR 696
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 207/738 (28%), Positives = 366/738 (49%), Gaps = 72/738 (9%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+NL N+++S++ K I +AR+LFD+MS R + +W MI+ + + A LF+ M
Sbjct: 56 ENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEM 115
Query: 125 ------PERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAG-----YAK 173
P FS +++ +C + R ++ + N+V+ Y+K
Sbjct: 116 MASGTHPNEFTFS-SVVRSCAGLRDISYGGRVHGSVIKTGFE---GNSVVGSSLSDLYSK 171
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN------ 227
GQF +A ++F+ + D +S+ M++ K AL F+ +M + V
Sbjct: 172 CGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKL 231
Query: 228 LMVSGFVN--SGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV 285
L S F+ G + + IP N V +++ +++ K+ +A R+ +S ++V
Sbjct: 232 LGASSFLGLEFGKTIHSNIIVRGIP-LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV 290
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQ 341
W ++++ + ++L+ EAV F++M + +++ I++ V LD +++++Q
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQ 350
Query: 342 MPCKDIAAETALMSGLIQ-----TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
T + + L+ + EAS++F + + + + W ++I G G + +
Sbjct: 351 TIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 397 ALDLFRQMPKKNS---------------------------------------VSWNTMIS 417
L +M K+ V N+++
Sbjct: 411 CFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD 470
Query: 418 GYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
YA + ++D A N+ ++M+ R+ +++ SL+T F + + AL + M +G + DQ +
Sbjct: 471 AYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLS 530
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
+ G LH Y +KSG+ V N+L+ MY+KCG +E A++VF I
Sbjct: 531 LPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA 590
Query: 538 CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLD 597
D++SWN L+SG A NG+ A AF++M +E PD VTF+ +LSACS+ L + GL+
Sbjct: 591 TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE 650
Query: 598 LFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH 657
F+ M + + IEP EHY LV +LGR GRLEEA VV M +K NA ++ +LL ACR
Sbjct: 651 YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYR 710
Query: 658 KNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSW 717
NL +GE A + L P + + YI L++++ E+G+ E ++ R LM +KR K G S
Sbjct: 711 GNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKST 770
Query: 718 IEVQNQIQCFLSDDSGRL 735
+EVQ ++ F+S+D R+
Sbjct: 771 VEVQGKVHSFVSEDVTRV 788
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 9/307 (2%)
Query: 385 IAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
I FC+S L + + K +N N ++S Y + + +A +F M R +
Sbjct: 30 ILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV 89
Query: 441 VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEY 500
+W +I+ F ++ + AL M G P++ TF G ++H
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 501 ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEA 560
++K+G+ + V ++L +Y+KCG+ + A ++F++++ D ISW +IS EA
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREA 209
Query: 561 FKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVD 620
+ + +M+ V P++ TF+ +L A S GL +V + + + + LVD
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLK--TSLVD 267
Query: 621 LLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACRVHKNLE-IGEFAAMRLSELEPHNA 678
+ ++E+A V+ + + LW S++ G R + E +G F MR L+P+N
Sbjct: 268 FYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF 326
Query: 679 SNYITLS 685
+ LS
Sbjct: 327 TYSAILS 333
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 195/725 (26%), Positives = 365/725 (50%), Gaps = 66/725 (9%)
Query: 63 IHKNLVTYNSMISVFAKNGKI-SDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF 121
+ K+ + N+++S++AK G I DA FD ++ +++VSWN +IAG+ N+M+ +A + F
Sbjct: 153 LEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSF 212
Query: 122 DVM---PERDNFSWA--LMITCYTRKGKL--EKARELLELVPDK--LDTACW--NAVIAG 170
+M P N++ ++ C + + R++ V + L T + N++++
Sbjct: 213 CLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSF 272
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL-- 228
Y + G+ +A +F M KDLVS+N ++AGY N + A F + K VS +
Sbjct: 273 YLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVT 332
Query: 229 ---MVSGFVNSGDLSSARQLFEKIPNPNAVSWVT-----MLCGFARHGKITEARRLFDSM 280
++ DL+S +++ I + + T ++ +AR G + A F M
Sbjct: 333 IISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM 392
Query: 281 PCKNVVSWNAMIAAYAQDLQ-----------IDEAVKLFIKMPHKDGVSWTTIINGYIRV 329
K+++SWNA++ A+A + ++EA+ L D V+ +++ I V
Sbjct: 393 STKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITL-------DSVTILSLLKFCINV 445
Query: 330 GKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
+ + +EV+ ++ +GL+ +E K+ N+++ +
Sbjct: 446 QGIGKVKEVHGY----------SVKAGLLHD---EEEPKL-----------GNALLDAYA 481
Query: 390 QSGRMDEALDLFRQMPKKNS-VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
+ G ++ A +F + ++ + VS+N+++SGY +G D A+ +F M ++ +W+ ++
Sbjct: 482 KCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVR 541
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN 508
+ ++ +A+ + G +P+ T + Q H YI++ G +
Sbjct: 542 IYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG-LG 600
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
D+ + L+ +YAKCG ++ A VF + DL+ + ++++GYA++G EA + M
Sbjct: 601 DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMT 660
Query: 569 SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
+ PD V ML+AC HAGL GL ++ + ++P E Y+C VDL+ R GRL
Sbjct: 661 ESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRL 720
Query: 629 EEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMH 688
++A++ V M V+ NA +WG+LL AC + +++G A L + E + N++ +SNM+
Sbjct: 721 DDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMY 780
Query: 689 AEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAIS 748
A +WE V LR LM+ K K GCSW+EV Q F+S D R ++I ++NA+
Sbjct: 781 AADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALY 840
Query: 749 AHMRD 753
M++
Sbjct: 841 LQMKE 845
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 49/273 (17%)
Query: 362 RVDEASKMFNQLSTRDTICWNSMIAGFCQS-GRMDEALDLFRQM-----PKKNSVSW--- 412
R+D+ KMF Q+ + D + WN ++ G S GR E + F+ M PK +SV++
Sbjct: 71 RMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIV 128
Query: 413 --------------------------------NTMISGYAQAGQM-DSAENIFQAMEERN 439
N ++S YA+ G + A F + +++
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX---XXXQVGNQ 496
+VSWN++I GF +N++ DA +S LM +E +P+ +T + G Q
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 497 LHEYILKSGYI-NDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
+H Y+++ ++ +FV N+L++ Y + GR+E A +FT + DL+SWN +I+GYA N
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308
Query: 556 YAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACS 587
+AF+ F ++ + +V PD VT I +L C+
Sbjct: 309 EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 199/456 (43%), Gaps = 76/456 (16%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
HVF N + ++G++EEA +F+ K+LV++N +I+ +A N + A QLF +
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 95 QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL 154
+ VS +++ S++ ++L D+ ++ S+ L + LLE
Sbjct: 322 HKGDVSPDSVTI----ISILPVCAQLTDLASGKEIHSYIL------------RHSYLLE- 364
Query: 155 VPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK------- 207
DT+ NA+I+ YA+ G S A F+LM KD++S+N++L + + K
Sbjct: 365 -----DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNL 419
Query: 208 --------------------------MGLA----LHFFEKMA-----EKNVVSWNLMVSG 232
G+ +H + A E+ N ++
Sbjct: 420 LHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDA 479
Query: 233 FVNSGDLSSARQLFEKIPNPNA-VSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAM 291
+ G++ A ++F + VS+ ++L G+ G +A+ LF M ++ +W+ M
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 292 IAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQM---PC 344
+ YA+ +EA+ +F ++ + + V+ ++ ++ L R+ + +
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL 599
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
DI + L+ + G + A +F + RD + + +M+AG+ GR EAL ++ M
Sbjct: 600 GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHM 659
Query: 405 PKKN----SVSWNTMISGYAQAGQMDSAENIFQAME 436
+ N V TM++ AG + I+ ++
Sbjct: 660 TESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIR 695
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 6/233 (2%)
Query: 414 TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG-REGKK 472
++++ YA+ +MD + +F+ M+ + V WN ++TG L S + ++ M + K
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPK 119
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV-ESAEQ 531
P TF G +H YI+K+G D V NAL++MYAK G + A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG- 590
F I D++SWN++I+G++ N +AF++F ML E P+ T +L C+
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 591 --LANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
G + +V+ ++ + LV R+GR+EEA ++ M K
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G LH + K G+I VS +++ MYAKC R++ +++F ++ +D + WN +++G ++
Sbjct: 40 GRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV 99
Query: 554 NGYAIEAFKAFKQM-LSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
+ E + FK M ++E P VTF +L C G + G + +++ +E
Sbjct: 100 SC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKA-GLEKDT 157
Query: 613 EHYSCLVDLLGRMGRL-EEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLS 671
+ LV + + G + +A+ G+ K + W +++ N+ F + L
Sbjct: 158 LVGNALVSMYAKFGFIFPDAYTAFDGIADK-DVVSWNAIIAGFS-ENNMMADAFRSFCLM 215
Query: 672 ELEPHNASNYITLSNM 687
EP NY T++N+
Sbjct: 216 LKEP-TEPNYATIANV 230
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 296 bits (758), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 296/584 (50%), Gaps = 64/584 (10%)
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGF 264
GK AL+ +A +S N V+ + G LS AR F PN S+ ++ +
Sbjct: 26 TGKSLHALYVKSIVASSTYLS-NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAY 84
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWT 320
A+ KI AR+LFD +P + VS+N +I+ YA + A+ LF +M DG + +
Sbjct: 85 AKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLS 144
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAA--------ETALMSGLIQTGRVDEASKMFNQ 372
+I + ++ Q+ C ++ A ++ + G + EA +F
Sbjct: 145 GLIAACC------DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 373 LST-RDTICWNSMIAGFCQSGRMDEALDLFRQMPKK------------------------ 407
+ RD + WNSMI + Q +AL L+++M K
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 408 ---------------NSVSWNTMISGYAQAGQMDS---AENIFQAMEERNIVSWNSLITG 449
NS + +I Y++ G D +E +FQ + ++V WN++I+G
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 450 FLQNS-LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI- 507
+ N L +A+KS M R G +PD +F Q+H +KS
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 508 NDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQM 567
N + V+NALI++Y K G ++ A VF + ++ +S+N +I GYA +G+ EA +++M
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM 438
Query: 568 LSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGR 627
L + P+++TF+ +LSAC+H G ++G + F M E F IEP AEHYSC++DLLGR G+
Sbjct: 439 LDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGK 498
Query: 628 LEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNM 687
LEEA + M K + W +LLGACR HKN+ + E AA L ++P A+ Y+ L+NM
Sbjct: 499 LEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANM 558
Query: 688 HAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDD 731
+A+A +WEE+ +R MR KR K PGCSWIEV+ + F+++D
Sbjct: 559 YADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 217/446 (48%), Gaps = 33/446 (7%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H L + SI + N + K G++ A F +T N+ +YN ++ +AK+ KI
Sbjct: 31 HALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKI 90
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCY 139
ARQLFD++ Q + VS+NT+I+GY A LF M E D F+ + +I
Sbjct: 91 HIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC 150
Query: 140 TRKGKLEKARELLELVPDKLD--TACWNAVIAGYAKKGQFSDAEKVFNLM-PVKDLVSYN 196
+ L K V D ++ NA + Y+K G +A VF M ++D VS+N
Sbjct: 151 CDRVDLIKQLHCFS-VSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWN 209
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP-- 250
SM+ Y Q+ + AL +++M K ++ + +++ + L RQ K+
Sbjct: 210 SMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA 269
Query: 251 --NPNAVSWVTMLCGFARHG---KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQI-DEA 304
+ N+ ++ +++ G + ++ ++F + ++V WN MI+ Y+ + ++ +EA
Sbjct: 270 GFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEA 329
Query: 305 VKLFIKMP---HK-DGVSWTTIINGYIRVGKLDEAREVY-----NQMPCKDIAAETALMS 355
VK F +M H+ D S+ + + + + ++++ + +P I+ AL+S
Sbjct: 330 VKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALIS 389
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVS 411
++G + +A +F+++ + + +N MI G+ Q G EAL L+++M N ++
Sbjct: 390 LYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 412 WNTMISGYAQAGQMDSAENIFQAMEE 437
+ ++S A G++D + F M+E
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTMKE 475
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 49/178 (27%)
Query: 60 SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL---------- 109
SN I N N++IS++ K+G + DAR +FD+M + N VS+N MI GY
Sbjct: 378 SNRISVN----NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALL 433
Query: 110 -------------------------HNSMVEEASKLFDVM-------PERDNFSWALMIT 137
H V+E + F+ M PE +++S MI
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS--CMID 491
Query: 138 CYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFN-LMPVKDLVS 194
R GKLE+A ++ +P K + W A++ K + AE+ N LM ++ L +
Sbjct: 492 LLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAA 549
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 296 bits (757), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/647 (27%), Positives = 318/647 (49%), Gaps = 53/647 (8%)
Query: 155 VPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
V +++ + G+A DA ++F+ M D +N M+ G+T G A+ F
Sbjct: 58 VTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQF 117
Query: 215 FEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFAR 266
+ +M + + ++ ++ L +++ + VS V +++ + +
Sbjct: 118 YSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMK 177
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTI 322
G +A ++F+ MP +++VSWN+MI+ Y ++ LF +M D S +
Sbjct: 178 LGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSA 237
Query: 323 INGYIRV-----GKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRD 377
+ V GK V +++ D+ T+++ + G V A ++FN + R+
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN 297
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTM----------------ISGYA- 420
+ WN MI + ++GR+ +A F++M ++N + + + I GYA
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAM 357
Query: 421 -------------------QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALK 461
+ GQ+ SAE IF M E+N++SWNS+I ++QN + AL+
Sbjct: 358 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 417
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
+ PD +T G ++H YI+KS Y ++ + N+L+ MYA
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 522 KCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
CG +E A + F I D++SWNS+I YA++G+ + F +M++ V P++ TF
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 582 MLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
+L+ACS +G+ ++G + F+ M ++ I+P EHY C++DL+GR G A + M
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 642 ANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLR 701
A +WGSLL A R HK++ I EFAA ++ ++E N Y+ L NM+AEAGRWE+V R++
Sbjct: 598 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 657
Query: 702 VLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAIS 748
+LM K + S +E + + F + D + I +L+ +S
Sbjct: 658 LLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS 704
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 219/465 (47%), Gaps = 66/465 (14%)
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PERDNFSW 132
FA + + DA QLFD+M++ + WN MI G+ + EA + + M + D F++
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 133 ALMITCYTRKGKLEKARELLELVPDKL----DTACWNAVIAGYAKKGQFSDAEKVFNLMP 188
+I LE+ +++ +V KL D N++I+ Y K G DAEKVF MP
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVI-KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKM------AEKNVVSWNLMVSGFVNS---GDL 239
+D+VS+NSM++GY G +L F++M ++ L V S G
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
+ +I + + ++L ++++G+++ A R+F+ M +N+V+WN MI YA++
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 300 QIDEAVKLFIKMPHKDGVSWTTIIN-GYIRVGKLDEAREVYNQ------MPCKDIAAETA 352
++ +A F KM ++G+ I + + + E R ++ +P + ETA
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLP--HMVLETA 370
Query: 353 LMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM------PK 406
L+ + G++ A +F++++ ++ I WNS+IA + Q+G+ AL+LF+++ P
Sbjct: 371 LIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPD 430
Query: 407 ---------------------------------KNSVSWNTMISGYAQAGQMDSAENIFQ 433
N++ N+++ YA G ++ A F
Sbjct: 431 STTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ +++VSWNS+I + + ++ M P++STF
Sbjct: 491 HILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 211/425 (49%), Gaps = 33/425 (7%)
Query: 43 IIHLGKLGKVEEAVRVFSNTIHKNLVT----YNSMISVFAKNGKISDARQLFDKMSQRNL 98
I + + +EE ++ + I V+ NS+IS++ K G DA ++F++M +R++
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCYTRKGKLEKARELL 152
VSWN+MI+GYL + LF M P+R + AL + K+ K
Sbjct: 197 VSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIH-C 255
Query: 153 ELVPDKLDTA---CWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG 209
V +++T +++ Y+K G+ S AE++FN M +++V++N M+ Y +NG++
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 210 LALHFFEKMAEKN------VVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG 263
A F+KM+E+N + S NL+ + + G + P+ V ++
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFL-PHMVLETALIDM 374
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSW 319
+ G++ A +FD M KNV+SWN++IAAY Q+ + A++LF ++ D +
Sbjct: 375 YGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQLST 375
+I+ Y L E RE++ + + T +++ L+ G +++A K FN +
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENI 431
+D + WNS+I + G ++ LF +M N ++ ++++ + +G +D
Sbjct: 495 KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEY 554
Query: 432 FQAME 436
F++M+
Sbjct: 555 FESMK 559
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 399 DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFD 458
D ++ + N + + G+A + M+ A +F M + + WN +I GF LY +
Sbjct: 54 DRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIE 113
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
A++ M G K D T+ + G ++H ++K G+++D++V N+LI+
Sbjct: 114 AVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLIS 173
Query: 519 MYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
+Y K G AE+VF + D++SWNS+ISGY G + FK+ML PD+ +
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
+ L ACSH G ++ V + ++D+ + G + A + GM
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 639 DVKANAGLWGSLLGA 653
++ N W ++G
Sbjct: 294 -IQRNIVAWNVMIGC 307
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 202/433 (46%), Gaps = 47/433 (10%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
++ K+GK V S +++ S++ +++K G++S A ++F+ M QRN+V+WN
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE---------- 153
MI Y N V +A F M E++ ++ + L A +LE
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSI-----NLLPASAILEGRTIHGYAMR 358
Query: 154 --LVPDK-LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGL 210
+P L+T A+I Y + GQ AE +F+ M K+++S+NS++A Y QNGK
Sbjct: 359 RGFLPHMVLET----ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS 414
Query: 211 ALHFFEKMAEKNVVSWNLMVS----GFVNSGDLSSARQLFEKIPN----PNAVSWVTMLC 262
AL F+++ + ++V + ++ + S LS R++ I N + +++
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVH 474
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM------PHKDG 316
+A G + +AR+ F+ + K+VVSWN++I AYA +V LF +M P+K
Sbjct: 475 MYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKS- 533
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETALMSGLIQTGRVDEASKMFN 371
++ +++ G +DE E + M + I ++ + +TG A +
Sbjct: 534 -TFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Query: 372 QLSTRDTI-CWNSMIAGFCQSGRM---DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDS 427
++ T W S++ + + A + +M N+ + +++ YA+AG+ +
Sbjct: 593 EMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWED 652
Query: 428 AENIFQAMEERNI 440
I ME + I
Sbjct: 653 VNRIKLLMESKGI 665
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 149/334 (44%), Gaps = 43/334 (12%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
H+ + I G+ G+++ A +F KN++++NS+I+ + +NGK A +LF ++
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL- 422
Query: 95 QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL 154
W++ S+V +++ + ++P Y L + RE+
Sbjct: 423 ------WDS--------SLVPDSTTIASILP------------AYAESLSLSEGREIHAY 456
Query: 155 VPDKL---DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLA 211
+ +T N+++ YA G DA K FN + +KD+VS+NS++ Y +G ++
Sbjct: 457 IVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 212 LHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLC 262
+ F +M N ++ +++ SG + + FE + +P + ML
Sbjct: 517 VWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLD 576
Query: 263 GFARHGKITEARRLFDSMP-CKNVVSWNAMIAAYA--QDLQIDE-AVKLFIKMPHKDGVS 318
R G + A+R + MP W +++ A +D+ I E A + KM H +
Sbjct: 577 LIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGC 636
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
+ ++N Y G+ ++ + M K I+ ++
Sbjct: 637 YVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSS 670
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 188/637 (29%), Positives = 327/637 (51%), Gaps = 59/637 (9%)
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
D +++ Y + G SDAEKVF+ MPV+DLV+++++++ +NG++ AL F+ M
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 220 ----EKNVVSWNLMVSGFVNSGDLSSAR----QLFEKIPNPNAVSWVTMLCGFARHGKIT 271
E + V+ +V G G L AR Q+ K+ + + ++L +++ G +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTI--------- 322
+ R+F+ + KN VSW AMI++Y + ++A++ F +M K G+ +
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI-KSGIEPNLVTLYSVLSSC 313
Query: 323 -INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICW 381
+ G IR GK V ++ + AL+ + G++ + + +S R+ + W
Sbjct: 314 GLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAW 373
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKK----------NSVS-------------------- 411
NS+I+ + G + +AL LFRQM + +S+S
Sbjct: 374 NSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR 433
Query: 412 --------WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
N++I Y+++G +DSA +F ++ R++V+WNS++ GF QN +A+
Sbjct: 434 TDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF 493
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
M + ++ TF + G +H ++ SG + DLF ALI MYAKC
Sbjct: 494 DYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKC 552
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
G + +AE VF A+ ++SW+S+I+ Y ++G A F QM+ P++V F+ +L
Sbjct: 553 GDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVL 612
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
SAC H+G +G F M + F + P +EH++C +DLL R G L+EA+ ++ M A+
Sbjct: 613 SACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLAD 671
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
A +WGSL+ CR+H+ ++I + LS++ + Y LSN++AE G WEE RLR
Sbjct: 672 ASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSA 731
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
M+ K+PG S IE+ ++ F + + R++ + I
Sbjct: 732 MKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEI 768
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/603 (24%), Positives = 273/603 (45%), Gaps = 68/603 (11%)
Query: 45 HLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
HL GKV R+ + + V S++ ++ + G +SDA ++FD M R+LV+W+T+
Sbjct: 116 HLSVGGKVHG--RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTL 173
Query: 105 IAGYLHNSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKARELLELVPDK-- 158
++ L N V +A ++F M E D + ++ G L AR + + K
Sbjct: 174 VSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMF 233
Query: 159 -LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
LD N+++ Y+K G +E++F + K+ VS+ +M++ Y + AL F +
Sbjct: 234 DLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSE 293
Query: 218 M----AEKNVVSWNLMVS-----GFVNSGDLSSARQLFEKI-PNPNAVSWVTMLCGFARH 267
M E N+V+ ++S G + G + ++ PN ++S + ++ +A
Sbjct: 294 MIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS-LALVELYAEC 352
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
GK+++ + + +N+V+WN++I+ YA + +A+ LF +M + D + + I
Sbjct: 353 GKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSI 412
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAE---TALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
+ G + ++++ + D++ E +L+ ++G VD AS +FNQ+ R +
Sbjct: 413 SACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVT 472
Query: 381 WNSMIAGFCQSGRMDEALDLFRQM-------------------------PKKNSVSWNTM 415
WNSM+ GF Q+G EA+ LF M K V +
Sbjct: 473 WNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI 532
Query: 416 ISG-------------YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
ISG YA+ G +++AE +F+AM R+IVSW+S+I + + A+ +
Sbjct: 533 ISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAIST 592
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAK 522
M G KP++ F + G + G + I + ++
Sbjct: 593 FNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSR 652
Query: 523 CGRVESAEQVFTAIE-CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
G ++ A + + D W SL++G ++ ++ KA K LS ++V D +
Sbjct: 653 SGDLKEAYRTIKEMPFLADASVWGSLVNGCRIH-QKMDIIKAIKNDLS-DIVTDDTGYYT 710
Query: 582 MLS 584
+LS
Sbjct: 711 LLS 713
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 175/380 (46%), Gaps = 26/380 (6%)
Query: 314 KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL 373
+D + T +I Y +G D +R V+ P D L+ + +D A ++++L
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 374 STRDT----ICWNSMIAGFCQSGRMDEALD------LFRQMPKKNSVSWNTMISGYAQAG 423
+ T + S++ C R ++ + + ++V +++ Y Q G
Sbjct: 92 VSETTQISKFVFPSVLRA-CAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
+ AE +F M R++V+W++L++ L+N AL+ M +G +PD T
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS 543
++ +H I + + D + N+L+ MY+KCG + S+E++F I + +S
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 544 WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV 603
W ++IS Y ++ +A ++F +M+ + P+ VT +LS+C GL +G V
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS-----V 325
Query: 604 EDFAI----EPLAEHYS-CLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHK 658
FA+ +P E S LV+L G+L + V+R + + N W SL+ + H+
Sbjct: 326 HGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR-NIVAWNSLI-SLYAHR 383
Query: 659 NLEI---GEFAAMRLSELEP 675
+ I G F M ++P
Sbjct: 384 GMVIQALGLFRQMVTQRIKP 403
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 189/421 (44%), Gaps = 53/421 (12%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--- 96
N + K G + + R+F KN V++ +MIS + + A + F +M +
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 97 -NLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSWALMITCYTRKGKLEKAR 149
NLV+ ++++ ++ E + ++ P ++ S AL + Y GKL
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL-VELYAECGKLSDCE 359
Query: 150 ELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQN 205
+L +V D+ + WN++I+ YA +G A +F M + D + S ++
Sbjct: 360 TVLRVVSDR-NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 206 GKMGLALHFFEKMAEKNVVS---WNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLC 262
G + L + +V N ++ + SG + SA +F +I + + V+W +MLC
Sbjct: 419 GLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTI 322
GF+++G EA LFD M Y L+++E V++ +
Sbjct: 479 GFSQNGNSVEAISLFDYM--------------YHSYLEMNE-------------VTFLAV 511
Query: 323 INGYIRVGKLDEAREVYNQM---PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
I +G L++ + V++++ KD+ +TAL+ + G ++ A +F +S+R +
Sbjct: 512 IQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
W+SMI + GR+ A+ F QM K N V + ++S +G ++ + F M
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM 631
Query: 436 E 436
+
Sbjct: 632 K 632
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 144/295 (48%), Gaps = 18/295 (6%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----E 126
NS+I +++K+G + A +F+++ R++V+WN+M+ G+ N EA LFD M E
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 127 RDNFSWALMITCYTRKGKLEKARELLE--LVPDKLDTACWNAVIAGYAKKGQFSDAEKVF 184
+ ++ +I + G LEK + + ++ D A+I YAK G + AE VF
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVF 562
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLS 240
M + +VS++SM+ Y +G++G A+ F +M E N V + ++S +SG +
Sbjct: 563 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 622
Query: 241 SARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMP-CKNVVSWNAMI--A 293
+ F + +PN+ + + +R G + EA R MP + W +++
Sbjct: 623 EGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGC 682
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWTTII-NGYIRVGKLDEAREVYNQMPCKDI 347
Q + I +A+K + D + T++ N Y G+ +E R + + M ++
Sbjct: 683 RIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
+ HKL I G K +F I K G + A VF +++V+++SMI+ + +G
Sbjct: 527 VHHKLIIS--GLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHG 584
Query: 82 KISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFS 131
+I A F++M ++ N V + +++ H+ VEE F++M P ++F
Sbjct: 585 RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHF- 643
Query: 132 WALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAG 170
A I +R G L++A ++ +P D + W +++ G
Sbjct: 644 -ACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 295 bits (755), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 174/598 (29%), Positives = 302/598 (50%), Gaps = 62/598 (10%)
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM--- 280
S ++++S + N L A LF+ + +P ++W +++ F ++A F M
Sbjct: 40 TSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRAS 99
Query: 281 ---PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWT--TIINGYIRV---GKL 332
P NV DL+ E+V FI D +T ++N Y ++ G
Sbjct: 100 GRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSK 159
Query: 333 DEAREVYNQMPCK-------DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
V+++MP + D+ AET +M I D ++F + +D + +N++I
Sbjct: 160 ISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI-----DSVRRVFEVMPRKDVVSYNTII 214
Query: 386 AGFCQSGRMDEALDLFRQM------PKKNSVS---------------------------- 411
AG+ QSG ++AL + R+M P ++S
Sbjct: 215 AGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID 274
Query: 412 -----WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
++++ YA++ +++ +E +F + R+ +SWNSL+ G++QN Y +AL+ M
Sbjct: 275 SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
KP F +G QLH Y+L+ G+ +++F+++AL+ MY+KCG +
Sbjct: 335 VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 527 ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
++A ++F + +D +SW ++I G+AL+G+ EA F++M + V P+QV F+ +L+AC
Sbjct: 395 KAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
SH GL ++ F M + + + EHY+ + DLLGR G+LEEA+N + M V+ +
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 647 WGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
W +LL +C VHKNLE+ E A ++ ++ N Y+ + NM+A GRW+E+ +LR+ MR
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 707 KRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDKFNVFNMQSVF 764
K K P CSWIE++N+ F+S D + I L A+ M + V + V
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVL 632
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 202/415 (48%), Gaps = 49/415 (11%)
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSWALMI 136
I R++F+ M ++++VS+NT+IAGY + M E+A ++ D+ P D+F+ + ++
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP--DSFTLSSVL 249
Query: 137 TCYTRKGKLEKARELLELVPDK-LDTACW--NAVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
++ + K +E+ V K +D+ + ++++ YAK + D+E+VF+ + +D +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN 253
S+NS++AGY QNG+ AL F +M V + S + P
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI-----------------PA 352
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH 313
T+ G HG + R F S N+ +A++ Y++ I A K+F +M
Sbjct: 353 CAHLATLHLGKQLHGYVL--RGGFGS----NIFIASALVDMYSKCGNIKAARKIFDRMNV 406
Query: 314 KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI----AAETALMSGLIQTGRVDEASKM 369
D VSWT II G+ G EA ++ +M + + A A+++ G VDEA
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466
Query: 370 FNQLS-----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAG 423
FN ++ ++ + ++ ++G+++EA + +M + + S W+T++S +
Sbjct: 467 FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHK 526
Query: 424 QMDSAENIFQ---AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG--KKP 473
++ AE + + ++ N+ ++ + + N + + K + M ++G KKP
Sbjct: 527 NLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKP 581
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 204/472 (43%), Gaps = 80/472 (16%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------PE 126
+IS++ + +A LF + +++W ++I + S+ +A F M P+
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 127 RDNFSWALMITCYT----RKGKLEKARELLELVPDKLDTACWNAVIAGYAK--------- 173
+ F +++ +C R G E + + D NA++ YAK
Sbjct: 105 HNVFP-SVLKSCTMMMDLRFG--ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 174 KGQFSD---------------------------AEKVFNLMPVKDLVSYNSMLAGYTQNG 206
G D +VF +MP KD+VSYN+++AGY Q+G
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 207 KMGLALHFFEKMAEKNVVSWNLMVSG----FVNSGDLSSARQLFEKIPNPNAVSWV---- 258
AL +M ++ + +S F D+ +++ + S V
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 281
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHK 314
+++ +A+ +I ++ R+F + C++ +SWN+++A Y Q+ + +EA++LF +M
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 315 DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMF 370
V+++++I + L ++++ + + + S L+ + G + A K+F
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMD 426
++++ D + W ++I G G EA+ LF RQ K N V++ +++ + G +D
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Query: 427 SAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
A F +M + + G Q ++ A+ L+GR GK + F
Sbjct: 462 EAWGYFNSMTK---------VYGLNQELEHYAAVAD--LLGRAGKLEEAYNF 502
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 42/281 (14%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V I ++ +S++ ++AK+ +I D+ ++F ++ R+ +SWN+++AGY+ N EA
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVP--DKLDTACWNAVIAGYAKKG 175
+LF M+T + G A ++P L T + GY +G
Sbjct: 328 LRLF-----------RQMVTAKVKPG----AVAFSSVIPACAHLATLHLGKQLHGYVLRG 372
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
F N+ LV Y++ G + A F++M + VSW ++ G
Sbjct: 373 GFGS-----NIFIASALVDM------YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 236 SGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAM 291
G A LFE++ PN V++V +L + G + EA F+SM V N
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM--TKVYGLNQE 479
Query: 292 IAAYA--QDL-----QIDEAVKLFIKM-PHKDGVSWTTIIN 324
+ YA DL +++EA KM G W+T+++
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 137/289 (47%), Gaps = 22/289 (7%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWN 102
K ++E++ RVFS ++ +++NS+++ + +NG+ ++A +LF +M + V+++
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 103 TMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPDK 158
++I H + + +L + + F + ++ Y++ G ++ AR++ + + +
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM-NV 406
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHF 214
LD W A+I G+A G +A +F M + + V++ ++L + G + A +
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466
Query: 215 FEKMAE-----KNVVSWNLMVSGFVNSGDLSSARQLFEKI-PNPNAVSWVTMLCGFARHG 268
F M + + + + + +G L A K+ P W T+L + H
Sbjct: 467 FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHK 526
Query: 269 KITEARRLFD---SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK 314
+ A ++ + ++ +N+ ++ M YA + + E KL ++M K
Sbjct: 527 NLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKK 575
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 255/478 (53%), Gaps = 40/478 (8%)
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR 376
V W ++ Y + G L +AR+V+++MP +D+ + +++G + G ++EA K+F++++ +
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPK------------------------------ 406
D+ W +M+ G+ + + +EAL L+ M +
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 407 ----------KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
+ V W++++ Y + G +D A NIF + E+++VSW S+I + ++S +
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 457 FDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
+ + ++P++ TF ++G Q+H Y+ + G+ F S++L
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
+ MY KCG +ESA+ V DL+SW SLI G A NG EA K F +L PD
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
VTF+ +LSAC+HAGL +GL+ F + E + ++HY+CLVDLL R GR E+ +V+
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 637 GMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
M +K + LW S+LG C + N+++ E AA L ++EP N Y+T++N++A AG+WEE
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 540
Query: 697 VERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDK 754
++R M++ K PG SW E++ + F++ D+ I L + M+++
Sbjct: 541 EGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEE 598
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 216/448 (48%), Gaps = 64/448 (14%)
Query: 51 KVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLH 110
KV E +R ++ +V +N ++ ++AK G + DAR++FD+M R+L SWN M+ GY
Sbjct: 106 KVHEHIR--TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAE 163
Query: 111 NSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA---RELLELVPDKL-------- 159
++EEA KLFD M E+D++SW M+T Y +K + E+A L++ VP+
Sbjct: 164 VGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 160 ----------------------------DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKD 191
D W++++ Y K G +A +F+ + KD
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
Query: 192 LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP- 250
+VS+ SM+ Y ++ + F ++ +G +N+ + +L +++
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 251 -------NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDE 303
+P + + +++ + + G I A+ + D P ++VSW ++I AQ+ Q DE
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDE 403
Query: 304 AVKLF---IKMPHK-DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA-----LM 354
A+K F +K K D V++ +++ G +++ E + + K + T+ L+
Sbjct: 404 ALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLV 463
Query: 355 SGLIQTGRVDEASKMFNQLSTRDT-ICWNSMIAGFCQSGRMD----EALDLFRQMPKKNS 409
L ++GR ++ + +++ + + W S++ G G +D A +LF+ P +N
Sbjct: 464 DLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP-ENP 522
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEE 437
V++ TM + YA AG+ + + + M+E
Sbjct: 523 VTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 29/323 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
GK G ++EA +F + K++V++ SMI + K+ + + LF ++ A
Sbjct: 264 GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFA 323
Query: 107 GYLH---NSMVEEASKLFDVMPER---DNFSWA--LMITCYTRKGKLEKARELLELVPDK 158
G L+ + EE K R D +S+A ++ YT+ G +E A+ +++ P K
Sbjct: 324 GVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-K 382
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHF 214
D W ++I G A+ GQ +A K F+L+ D V++ ++L+ T G + L F
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Query: 215 FEKMAEKNVVS-----WNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTMLCGFARHG 268
F + EK+ +S + +V SG + + ++P P+ W ++L G + +G
Sbjct: 443 FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
Query: 269 KI----TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH-----KDGVSW 319
I A+ LF P +N V++ M YA + +E K+ +M + G SW
Sbjct: 503 NIDLAEEAAQELFKIEP-ENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSW 561
Query: 320 TTIINGYIRVGKLDEAREVYNQM 342
T I D + +YNQ+
Sbjct: 562 TEIKRKRHVFIAADTSHPMYNQI 584
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 206/764 (26%), Positives = 350/764 (45%), Gaps = 120/764 (15%)
Query: 60 SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASK 119
S + + V +I+++A G D+R +FD + +NL WN +I+ Y N + +E +
Sbjct: 113 STRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172
Query: 120 LFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKG-QFS 178
F M +L+PD C AG + G +
Sbjct: 173 TFIEMISTT------------------------DLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD 238
V V+D+ N++++ Y +G + AL F+ M E+N+VSWN M+ F ++G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 239 LSSARQLFEKIPN--------PNAVSWVTML--CG------------------------- 263
+ L ++ P+ + VT+L C
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 264 --------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM---P 312
+++ G IT A+ +F KNVVSWN M+ ++ + + +M
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 313 HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE--------TALMSGLIQTGRVD 364
TI+N + V + ++ C + E A ++ + G +
Sbjct: 389 EDVKADEVTILNA-VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM------PKKNSVS------- 411
A ++F+ + ++ WN++I G QS +LD QM P +V
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Query: 412 --------------------------WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNS 445
+ +++S Y G++ + + +F AME++++VSWN+
Sbjct: 508 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
+ITG+LQN AL M G + + ++G + H Y LK
Sbjct: 568 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL 627
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
+D F++ +LI MYAK G + + +VF ++ SWN++I GY ++G A EA K F+
Sbjct: 628 LEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFE 687
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRM 625
+M PD +TF+G+L+AC+H+GL ++GL M F ++P +HY+C++D+LGR
Sbjct: 688 EMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 747
Query: 626 GRLEEAFNVV-RGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITL 684
G+L++A VV M +A+ G+W SLL +CR+H+NLE+GE A +L ELEP NY+ L
Sbjct: 748 GQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLL 807
Query: 685 SNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL 728
SN++A G+WE+V ++R M + K GCSWIE+ ++ F+
Sbjct: 808 SNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFV 851
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 205/731 (28%), Positives = 345/731 (47%), Gaps = 111/731 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----E 126
N++++++AK +S A +F M R++VSWNT++ L N ++ + F M E
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELV-----PDKLDTACWNAVIAGYAKKGQFSDAE 181
D +++ +I+ + +L L LV + + N++I+ Y+K G AE
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
VF + +D++S N++L G+ NG A +M
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM----------------------- 383
Query: 242 ARQLFEKI-PNPNAVSWVTMLCG---FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
Q +KI P+ V +T +CG F+R G+ + M + + N++I Y +
Sbjct: 384 --QSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 298 DLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAR----EVYNQMPCKDIAAET-- 351
+A LF H+D VSW ++I+ + + G +A+ EV ++ C + T
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVL 501
Query: 352 ----------ALMSG------LIQTGRVDEASKMFNQLS-TRDTICWNSMIAGFCQSGRM 394
+L+ G L + G + A +S TRD WNS+I+G SG
Sbjct: 502 AILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Query: 395 DEALDLFRQMPKKNSVS----------------------------------------WNT 414
E+L F+ M ++ + NT
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL---YFDALKSLVLMGREGK 471
+I+ Y + ++SA +F + + N+ SWN +I+ QN F ++L L
Sbjct: 622 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKL------ 675
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQ 531
+P++ TF G Q H ++++ G+ + FVS AL+ MY+ CG +E+ +
Sbjct: 676 EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMK 735
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS-EEVVPDQVTFIGMLSACSHAG 590
VF + +WNS+IS + +G +A + FK++ S E+ P++ +FI +LSACSH+G
Sbjct: 736 VFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSG 795
Query: 591 LANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSL 650
++GL +K M E F ++P+ EH +VD+LGR G+L EA+ + G+ AG+WG+L
Sbjct: 796 FIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGAL 855
Query: 651 LGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAG 710
L AC H + ++G+ A L E+EP NAS YI+L+N + G WEE RLR ++ D
Sbjct: 856 LSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALK 915
Query: 711 KLPGCSWIEVQ 721
KLPG S I+V+
Sbjct: 916 KLPGYSVIDVR 926
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 173/691 (25%), Positives = 321/691 (46%), Gaps = 70/691 (10%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
++L T + +++ + + G++ + LFD++ +++++ WN+MI N A LF M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 125 PERDN-FSWALMITCYTRKGKLEKARE--LLELVPDKL----DTACWNAVIAGYAKKGQF 177
+ N F ++ + L +R+ +L + + D++ NA++ YAK
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGF 233
S AE VF M +D+VS+N+++ NG +L +F+ M E + V+++ ++S
Sbjct: 240 SSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISAC 299
Query: 234 VNSGDLSSARQLFEKI------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
+ +L+ L + P + +++ +++ G A +F+ + C++V+S
Sbjct: 300 SSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVIS 359
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKMPHKDG--------VSWTTIIN--GYIRVGKLDEARE 337
NA++ +A + +EA + +M D VS T+I + R G+
Sbjct: 360 SNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYT 419
Query: 338 VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
V +M + + +++ + G +A +F + RD + WNSMI+ F Q+G +A
Sbjct: 420 VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKA 479
Query: 398 LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI----------------------FQAM 435
+LF+++ + S S ++ + A DS++++ + M
Sbjct: 480 KNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETM 539
Query: 436 EE-RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQV 493
E R++ SWNS+I+G + + ++L++ M REGK + D T
Sbjct: 540 SETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQ 599
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G H +KS D + N LI MY +C +ESA +VF I +L SWN +IS +
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV-EDFAIEPLA 612
N E F+ F+ + E P+++TF+G+LSA + G + G+ ++ F P
Sbjct: 660 NKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRL-- 670
+ LVD+ G LE V R V + + W S++ A H +GE AM L
Sbjct: 717 S--AALVDMYSSCGMLETGMKVFRNSGVNSISA-WNSVISAHGFHG---MGE-KAMELFK 769
Query: 671 -----SELEPHNASNYITLSNMHAEAGRWEE 696
SE+EP N S++I+L + + +G +E
Sbjct: 770 ELSSNSEMEP-NKSSFISLLSACSHSGFIDE 799
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 134/552 (24%), Positives = 232/552 (42%), Gaps = 84/552 (15%)
Query: 120 LFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSD 179
LFD +PER+N T + R++L + +T +V K G
Sbjct: 71 LFDELPEREN---------RTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGL--- 118
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
++DL + + +L Y + G++ + F+++ EK+V+ WN M++ +G
Sbjct: 119 ---------LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRY 169
Query: 240 SSARQLF-EKIPNPNAVSWVTML--------------CGFARHGKITEARRLFDSMPCKN 284
+A LF E I N T+L C H E + DS C
Sbjct: 170 IAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSML-HCLAIETGLVGDSSLC-- 226
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
NA++ YA+ + A +F M H+D VSW TI+ + G ++ + + M
Sbjct: 227 ----NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
A+T S +I A +L+ +++ + +G+
Sbjct: 283 SGQEADTVTFSCVIS------ACSSIEELTLGESLHGLVIKSGYS--------------- 321
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
P+ + N++IS Y++ G ++AE +F+ + R+++S N+++ GF N ++ +A L
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 465 LMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND-LFVSNALIAMYAK 522
M K +PD +T + G +H Y ++ + L V N++I MY K
Sbjct: 382 QMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 523 CGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
CG AE +F DL+SWNS+IS ++ NG+ +A FK+++SE
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY----------- 490
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+CS L+ L C D I + H C L ++G L AF + M
Sbjct: 491 --SCSKFSLSTVLAILTSCDSSDSLIFGKSVH--C---WLQKLGDLTSAFLRLETMSETR 543
Query: 643 NAGLWGSLLGAC 654
+ W S++ C
Sbjct: 544 DLTSWNSVISGC 555
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 271/471 (57%), Gaps = 26/471 (5%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
G + A +LFD +P +V N ++ AQ ++ ++ V L+ +M + D ++T ++
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 324 ----------NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL 373
NG+ GK+ V N+ + AL+ G + AS++F+
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEY------VKNALILFHANCGDLGIASELFDDS 173
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ 433
+ + W+SM +G+ + G++DEA+ LF +MP K+ V+WN MI+G + +MDSA +F
Sbjct: 174 AKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFD 233
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
E+++V+WN++I+G++ +AL M G+ PD T +
Sbjct: 234 RFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLET 293
Query: 494 GNQLHEYILKSGYIND-LFVS----NALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
G +LH YIL++ ++ ++V NALI MYAKCG ++ A +VF ++ DL +WN+LI
Sbjct: 294 GKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLI 353
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAI 608
G AL+ +A + + F++M +V P++VTFIG++ ACSH+G ++G F M + + I
Sbjct: 354 VGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNI 412
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAM 668
EP +HY C+VD+LGR G+LEEAF V M ++ NA +W +LLGAC+++ N+E+G++A
Sbjct: 413 EPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANE 472
Query: 669 RLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
+L + + +Y+ LSN++A G+W+ V+++R + D R K G S IE
Sbjct: 473 KLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 165/337 (48%), Gaps = 45/337 (13%)
Query: 143 GKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSM 198
G L+ A +L + +P K D + N V+ G A+ + ++ M + D ++ +
Sbjct: 60 GALKYAHKLFDEIP-KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFV 118
Query: 199 LA----------GYTQNGKM---GLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQL 245
L G+ +GK+ G L+ + K N ++ N GDL A +L
Sbjct: 119 LKACSKLEWRSNGFAFHGKVVRHGFVLNEYVK---------NALILFHANCGDLGIASEL 169
Query: 246 FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAV 305
F+ + V+W +M G+A+ GKI EA RLFD MP K+ V+WN MI + ++D A
Sbjct: 170 FDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSAR 229
Query: 306 KLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMS-----G 356
+LF + KD V+W +I+GY+ G EA ++ +M D+ +L+S G
Sbjct: 230 ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 357 LIQTGR-----VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS 411
++TG+ + E + + + + T WN++I + + G +D A+++FR + ++ +
Sbjct: 290 DLETGKRLHIYILETASVSSSIYV-GTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLST 348
Query: 412 WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
WNT+I G A S E +F+ M+ + W + +T
Sbjct: 349 WNTLIVGLALHHAEGSIE-MFEEMQRLKV--WPNEVT 382
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 83/297 (27%)
Query: 237 GDLSSARQLFEKIPNPN-------------------------------------AVSWVT 259
G L A +LF++IP P+ ++V
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 260 MLC--------GFARHGKITE-------------------------ARRLFDSMPCKNVV 286
C GFA HGK+ A LFD + V
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKD 346
+W++M + YA+ +IDEA++LF +MP+KD V+W +I G ++ ++D ARE++++ KD
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 347 IAAETALMSGLIQTGRVDEASKMFNQLST----RDTICWNSMIAGFCQSGRMDEALDLFR 402
+ A++SG + G EA +F ++ D + S+++ G ++ L
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 403 QMPKKNSVS---------WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGF 450
+ + SVS WN +I YA+ G +D A +F+ +++R++ +WN+LI G
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGL 356
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 171/371 (46%), Gaps = 35/371 (9%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
+ KN I+ G + A +F ++ + V ++SM S +AK GKI +A +LFD+M +
Sbjct: 148 YVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK 207
Query: 97 NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVP 156
+ V+WN MI G L ++ A +LFD E+D +W MI+ Y G ++A + + +
Sbjct: 208 DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMR 267
Query: 157 D---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVS---------YNSMLAGYTQ 204
D D ++++ A G +++ + VS +N+++ Y +
Sbjct: 268 DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAK 327
Query: 205 NGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTM 260
G + A+ F + ++++ +WN ++ G S ++FE++ PN V+++ +
Sbjct: 328 CGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSI-EMFEEMQRLKVWPNEVTFIGV 386
Query: 261 LCGFARHGKITEARRLFDSMPC-----KNVVSWNAMIAAYAQDLQIDEAVKLFIKMP-HK 314
+ + G++ E R+ F M N+ + M+ + Q++EA M
Sbjct: 387 ILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEP 446
Query: 315 DGVSWTTI-----INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI-QTGR---VDE 365
+ + W T+ I G + +GK A E M KD + + L+S + TG+ V +
Sbjct: 447 NAIVWRTLLGACKIYGNVELGKY--ANEKLLSMR-KDESGDYVLLSNIYASTGQWDGVQK 503
Query: 366 ASKMFNQLSTR 376
KMF+ +
Sbjct: 504 VRKMFDDTRVK 514
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 181/604 (29%), Positives = 307/604 (50%), Gaps = 40/604 (6%)
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
VF++ P L S +++ YT+ + ALH F+++ +N S+N ++ + + A
Sbjct: 50 VFSIKPDNFLAS--KLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDA 107
Query: 243 RQLF----------EKIPNPNAVSWVTML-----C------GFAR--HGKITEARRLFDS 279
LF P+++S +L C AR HG + R FDS
Sbjct: 108 FSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI--RGGFDS 165
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVY 339
+V N MI Y + I+ A K+F +M +D VSW ++I+GY + G ++ +++Y
Sbjct: 166 ----DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 340 NQM-PCKDIAAETALMSGLIQT-GR-------VDEASKMFNQLSTRDTICWNSMIAGFCQ 390
M C D + + Q G+ ++ KM D N++I + +
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 391 SGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGF 450
G +D A LF +M +K+SV++ +ISGY G + A +F ME + +WN++I+G
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDL 510
+QN+ + + + S M R G +P+ T + G ++H + +++G N++
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI 401
Query: 511 FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+V+ ++I YAK G + A++VF + LI+W ++I+ YA++G + A F QM
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
PD VT +LSA +H+G ++ +F M+ + IEP EHY+C+V +L R G+L +
Sbjct: 462 GTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSD 521
Query: 631 AFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAE 690
A + M + A +WG+LL V +LEI FA RL E+EP N NY ++N++ +
Sbjct: 522 AMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQ 581
Query: 691 AGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAH 750
AGRWEE E +R M+ K+PG SWIE + ++ F++ DS R + + I+ +
Sbjct: 582 AGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVES 641
Query: 751 MRDK 754
M DK
Sbjct: 642 MSDK 645
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 206/428 (48%), Gaps = 64/428 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N MI+ + K I AR++FD+MS+R++VSWN+MI+GY + E+ K++ M +F
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 131 --SWALMITCYTRKGK-------LEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAE 181
+ +I+ + G+ LE ++++E ++D + NAVI YAK G A
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIE-NHIQMDLSLCNAVIGFYAKCGSLDYAR 289
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD--- 238
+F+ M KD V+Y ++++GY +G + A+ F +M + +WN M+SG + +
Sbjct: 290 ALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEE 349
Query: 239 -LSSARQLFEKIPNPNAVSWVTMLCG---------------------------------- 263
++S R++ PN V+ ++L
Sbjct: 350 VINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
Query: 264 -FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVS 318
+A+ G + A+R+FD+ +++++W A+I AYA D A LF +M D V+
Sbjct: 410 NYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVT 469
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETALMSGLIQTGRVDEASKMFNQL 373
T +++ + G D A+ +++ M K + ++S L + G++ +A + +++
Sbjct: 470 LTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM 529
Query: 374 STRDTIC--WNSMIAGFCQSGRMD---EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSA 428
D I W +++ G G ++ A D +M +N+ ++ M + Y QAG+ + A
Sbjct: 530 PI-DPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEA 588
Query: 429 ENIFQAME 436
E + M+
Sbjct: 589 EMVRNKMK 596
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 202/468 (43%), Gaps = 75/468 (16%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
F +++ +H+ +L R+ +I + + +IS + + + A +FD+++ R
Sbjct: 32 FTRHRLPLHVLQL-----HARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVR 86
Query: 97 NLVSWNTMIAGYLHNSMVEEASKLF------------DVMPERDNFSWAL---------- 134
N S+N ++ Y M +A LF P+ + S L
Sbjct: 87 NAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFW 146
Query: 135 --------------------------MITCYTRKGKLEKARELLELVPDKLDTACWNAVI 168
MIT YT+ +E AR++ + + ++ D WN++I
Sbjct: 147 LGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSER-DVVSWNSMI 205
Query: 169 AGYAKKGQFSDAEKVFN-LMPVKDL----VSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
+GY++ G F D +K++ ++ D V+ S+ Q+ + L +KM E ++
Sbjct: 206 SGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHI 265
Query: 224 ----VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
N ++ + G L AR LF+++ ++V++ ++ G+ HG + EA LF
Sbjct: 266 QMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSE 325
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGKLDEA 335
M + +WNAMI+ Q+ +E + F +M + V+ ++++ L
Sbjct: 326 MESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGG 385
Query: 336 REVY----NQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
+E++ +I T+++ + G + A ++F+ R I W ++I +
Sbjct: 386 KEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVH 445
Query: 392 GRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
G D A LF QM K + V+ ++S +A +G D A++IF +M
Sbjct: 446 GDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSM 493
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 22/324 (6%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N I K G ++ A +F K+ VTY ++IS + +G + +A LF +M L
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKARELLEL- 154
+WN MI+G + N+ EE F M + + + ++ T L+ +E+
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 155 VPDKLDTACW--NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ + D + ++I YAK G A++VF+ + L+++ +++ Y +G A
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 213 HFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCG 263
F++M + + V+ ++S F +SGD A+ +F+ + P + M+
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 264 FARHGKITEARRLFDSMPCKNVVS-WNAMI--AAYAQDLQIDEAV--KLFIKMPHKDGVS 318
+R GK+++A MP + W A++ A+ DL+I +LF P G +
Sbjct: 513 LSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTG-N 571
Query: 319 WTTIINGYIRVGKLDEAREVYNQM 342
+T + N Y + G+ +EA V N+M
Sbjct: 572 YTIMANLYTQAGRWEEAEMVRNKM 595
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H I + +++ I + KLG + A RVF N ++L+ + ++I+ +A +G
Sbjct: 389 HAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDS 448
Query: 84 SDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WAL 134
A LFD+M ++ + V+ +++ + H+ + A +FD M + + +A
Sbjct: 449 DSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYAC 508
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDA----EKVFNLMPVK 190
M++ +R GKL A E + +P W A++ G + G A +++F + P +
Sbjct: 509 MVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP-E 567
Query: 191 DLVSYNSMLAGYTQNGK 207
+ +Y M YTQ G+
Sbjct: 568 NTGNYTIMANLYTQAGR 584
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/643 (27%), Positives = 307/643 (47%), Gaps = 88/643 (13%)
Query: 198 MLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI------PN 251
+++ + + G + A FE + K V ++ M+ GF DL A Q F ++ P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 252 PNAVSWVTMLCGFARHGKITEARR--LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
+++ +CG ++ + L S ++ + + YA+ Q++EA K+F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 310 KMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKD----------------------- 346
+MP +D VSW TI+ GY + G A E+ M C++
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSM-CEENLKPSFITIVSVLPAVSALRLIS 253
Query: 347 -----------------IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
+ TAL+ + G ++ A ++F+ + R+ + WNSMI +
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 390 QSGRMDEALDLFRQM------PKKNSV--------------------------------- 410
Q+ EA+ +F++M P SV
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
N++IS Y + ++D+A ++F ++ R +VSWN++I GF QN DAL M
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAE 530
KPD T+ +H +++S ++FV+ AL+ MYAKCG + A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 531 QVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
+F + + +WN++I GY +G+ A + F++M + P+ VTF+ ++SACSH+G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 591 LANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSL 650
L GL F M E+++IE +HY +VDLLGR GRL EA++ + M VK ++G++
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 651 LGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAG 710
LGAC++HKN+ E AA RL EL P + ++ L+N++ A WE+V ++RV M +
Sbjct: 614 LGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLR 673
Query: 711 KLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
K PGCS +E++N++ F S + + I L + H+++
Sbjct: 674 KTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 716
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 145/543 (26%), Positives = 254/543 (46%), Gaps = 79/543 (14%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
VF N +++ ++S+F + G + +A ++F+ + + V ++TM+ G+ S +++A
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119
Query: 118 SKLF------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVI 168
+ F DV P NF++ L + + +L +E+ L+ LD +
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVC--GDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV-VSWN 227
YAK Q ++A KVF+ MP +DLVS+N+++AGY+QNG +AL + M E+N+ S+
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 228 LMVSGFVNSGDLS-----------SARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
+VS L + R F+ + N + + V M +A+ G + AR+L
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI-STALVDM---YAKCGSLETARQL 293
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTI-----INGYIRVGK 331
FD M +NVVSWN+MI AY Q+ EA+ +F KM +GV T + ++ +G
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEGVKPTDVSVMGALHACADLGD 352
Query: 332 LDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
L+ R ++ ++++ +L+S + VD A+ MF +L +R + WN+MI G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 388 FCQSGRMDEALDLFRQMPK---------------------------------------KN 408
F Q+GR +AL+ F QM KN
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
++ YA+ G + A IF M ER++ +WN++I G+ + AL+ M +
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN--ALIAMYAKCGRV 526
KP+ TF + G + Y++K Y +L + + A++ + + GR+
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRL 591
Query: 527 ESA 529
A
Sbjct: 592 NEA 594
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 211/487 (43%), Gaps = 97/487 (19%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL--VSWNTM- 104
+ G V+EA RVF K V Y++M+ FAK + A Q F +M ++ V +N
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 105 ----------------IAGYLHNS--------------------MVEEASKLFDVMPERD 128
I G L S V EA K+FD MPERD
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 129 NFSWALMITCYTRKGKLEKARELLE------LVPDKLDTACW------------------ 164
SW ++ Y++ G A E+++ L P +
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 165 --------------NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGL 210
A++ YAK G A ++F+ M +++VS+NSM+ Y QN
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 211 ALHFFEKMAEKNVVSWNLMVSGFVNS----GDLSSAR---QLFEKIPNPNAVSWV-TMLC 262
A+ F+KM ++ V ++ V G +++ GDL R +L ++ VS V +++
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVS 318
+ + ++ A +F + + +VSWNAMI +AQ+ + +A+ F +M + D +
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 319 WTTIINGYIRVGKLDEAREVYNQM--PC--KDIAAETALMSGLIQTGRVDEASKMFNQLS 374
+ ++I + A+ ++ + C K++ TAL+ + G + A +F+ +S
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 375 TRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAEN 430
R WN+MI G+ G AL+LF +M K N V++ ++IS + +G +++
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 431 IFQAMEE 437
F M+E
Sbjct: 561 CFYMMKE 567
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 171/376 (45%), Gaps = 57/376 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
+++ ++AK G + ARQLFD M +RN+VSWN+MI Y+ N +EA +F M +
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 128 -DNFSWALMITCYTRKGKLEKAREL----LELVPDKLDTACWNAVIAGYAKKGQFSDAEK 182
+ S + G LE+ R + +EL D+ + + N++I+ Y K + A
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR-NVSVVNSLISMYCKCKEVDTAAS 393
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM-VSGFVNSGDLSS 241
+F + + LVS+N+M+ G+ QNG+ AL++F +M + V VS +LS
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 242 ARQ-------LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
+ + N ++ +A+ G I AR +FD M ++V +WNAMI
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 295 YAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
Y A++LF +M +GV++ ++I+ C
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA------------------CSH---- 551
Query: 351 TALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQMP 405
SGL++ G K F + +I + +M+ ++GR++EA D QMP
Sbjct: 552 ----SGLVEAGL-----KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 406 KKNSVSWNTMISGYAQ 421
K +V+ + G Q
Sbjct: 603 VKPAVNVYGAMLGACQ 618
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
+ +N+ NS+IS++ K ++ A +F K+ R LVSWN MI G+ N +A F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 123 VMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK-LDTACW--NAVIAGYAKKG 175
M R D F++ +IT A+ + +V LD + A++ YAK G
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVS 231
A +F++M + + ++N+M+ GY +G AL FE+M + N V++ ++S
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 232 GFVNSGDLSSARQLFEKIPNPNAVS-----WVTMLCGFARHGKITEARRLFDSMPCKNVV 286
+SG + + + F + ++ + M+ R G++ EA MP K V
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 287 S-WNAMIAA 294
+ + AM+ A
Sbjct: 608 NVYGAMLGA 616
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V + + KN+ +++ ++AK G I AR +FD MS+R++ +WN MI GY + + A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 118 SKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPD----KLDTACWNAVIA 169
+LF+ M + + ++ +I+ + G +E + ++ + +L + A++
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
+ G+ ++A MPVK V+ + G Q K ++F EK AE+
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK---NVNFAEKAAER 632
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 245/415 (59%), Gaps = 11/415 (2%)
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ---TGRVDEASKMFNQLST 375
WT +I GY GK DEA +Y M ++I + S L++ T + + F+ +
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTF 176
Query: 376 R-DTICW----NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAEN 430
R C+ N+MI + + +D A +F +MP+++ +SW +I+ YA+ G M+ A
Sbjct: 177 RLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAE 236
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
+F+++ +++V+W +++TGF QN+ +AL+ M + G + D+ T
Sbjct: 237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGA 296
Query: 491 XQVGNQLHEYILKSGYI--NDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
+ ++ + KSGY + + + +ALI MY+KCG VE A VF ++ ++ +++S+I
Sbjct: 297 SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 549 SGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFA 607
G A +G A EA F M+++ E+ P+ VTF+G L ACSH+GL +QG +F M + F
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAA 667
++P +HY+C+VDLLGR GRL+EA +++ M V+ + G+WG+LLGACR+H N EI E AA
Sbjct: 417 VQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAA 476
Query: 668 MRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQN 722
L ELEP NYI LSN++A AG W V R+R L+++K K P SW+ +N
Sbjct: 477 EHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 169/366 (46%), Gaps = 39/366 (10%)
Query: 73 MISVFAKNGKISD--ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVM 124
+I K G D AR++ + + RN W +I GY +EA ++ ++
Sbjct: 87 LIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEIT 146
Query: 125 PERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW----NAVIAGYAKKGQFSDA 180
P FS AL+ C T K L R+ +L C+ N +I Y K A
Sbjct: 147 PVSFTFS-ALLKACGTMK-DLNLGRQ-FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCA 203
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLS 240
KVF+ MP +D++S+ ++A Y + G M A FE + K++V+W MV+GF +
Sbjct: 204 RKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQ 263
Query: 241 SARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFD------SMPCKNVVSWNA 290
A + F+++ + V+ + A+ G A R P +VV +A
Sbjct: 264 EALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSA 323
Query: 291 MIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK-DIAA 349
+I Y++ ++EAV +F+ M +K+ +++++I G G+ EA +++ M + +I
Sbjct: 324 LIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKP 383
Query: 350 ET-----ALM----SGLIQTGR--VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL 398
T ALM SGL+ GR D + F TRD + M+ ++GR+ EAL
Sbjct: 384 NTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH--YTCMVDLLGRTGRLQEAL 441
Query: 399 DLFRQM 404
+L + M
Sbjct: 442 ELIKTM 447
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 149/310 (48%), Gaps = 22/310 (7%)
Query: 159 LDTACW--NAVIAGYAKKGQFSD--AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
LD +C+ +I K G D A +V + ++ + +++ GY GK A+
Sbjct: 77 LDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAM 136
Query: 215 FEKMAEKNVVSWNLMVSGFVNS----GDLSSARQLFEKIPNPNAVSWV----TMLCGFAR 266
+ M ++ + + S + + DL+ RQ + +V TM+ + +
Sbjct: 137 YGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVK 196
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGY 326
I AR++FD MP ++V+SW +IAAYA+ ++ A +LF +P KD V+WT ++ G+
Sbjct: 197 CESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGF 256
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQ---------LSTRD 377
+ K EA E +++M I A+ ++G I ASK ++ S D
Sbjct: 257 AQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSD 316
Query: 378 TICWNS-MIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
+ S +I + + G ++EA+++F M KN ++++MI G A G+ A ++F M
Sbjct: 317 HVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMV 376
Query: 437 ERNIVSWNSL 446
+ + N++
Sbjct: 377 TQTEIKPNTV 386
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 145/305 (47%), Gaps = 40/305 (13%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+MI ++ K I AR++FD+M +R+++SW +IA Y +E A++LF+ +P +D
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGY----AKKGQFSDAEKVFNL 186
+W M+T + + K ++A E + + +K +AGY A+ G A++ +
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRM-EKSGIRADEVTVAGYISACAQLGASKYADRAVQI 306
Query: 187 M------PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLS 240
P +V ++++ Y++ G + A++ F M KNV +++ M+ G G
Sbjct: 307 AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 241 SARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSM-------PCKNVVSW 288
A LF + PN V++V L + G + + R++FDSM P ++ +
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRD--HY 424
Query: 289 NAMIAAYAQDLQIDEAVKLFIKM---PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK 345
M+ + ++ EA++L M PH G W G L A ++N
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTMSVEPH--GGVW----------GALLGACRIHNNPEIA 472
Query: 346 DIAAE 350
+IAAE
Sbjct: 473 EIAAE 477
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 139/343 (40%), Gaps = 55/343 (16%)
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL----------FRQMPKKNSV 410
GR S F+++S + + +S+I+ ++D+ ++L R+ ++
Sbjct: 29 GRTSNNSGTFSEISNQKELLVSSLIS------KLDDCINLNQIKQIHGHVLRKGLDQSCY 82
Query: 411 SWNTMISGYAQAG-QMDS-AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
+I + G MD A + + ++ RN W ++I G+ + +A+ M +
Sbjct: 83 ILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRK 142
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
E P TF +G Q H + ++V N +I MY KC ++
Sbjct: 143 EEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDC 202
Query: 529 AEQVFTAIECVDLISWNSLI-------------------------------SGYALNGYA 557
A +VF + D+ISW LI +G+A N
Sbjct: 203 ARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKP 262
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHY-- 615
EA + F +M + D+VT G +SAC+ G A++ D + + P ++H
Sbjct: 263 QEALEYFDRMEKSGIRADEVTVAGYISACAQLG-ASKYADRAVQIAQKSGYSP-SDHVVI 320
Query: 616 -SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH 657
S L+D+ + G +EEA NV M+ K N + S++ H
Sbjct: 321 GSALIDMYSKCGNVEEAVNVFMSMNNK-NVFTYSSMILGLATH 362
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 261/475 (54%), Gaps = 7/475 (1%)
Query: 250 PNPNAVSWVTMLCGFARH---GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
P+ +AV+ V CG + GK A+ L + + C V ++ Y++ I+ A K
Sbjct: 102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGL-CGCVYVQTGLVGLYSRLGYIELAKK 160
Query: 307 LFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEA 366
F + K+ VSW ++++GY+ G+LDEAR V++++P KD + ++S + G + A
Sbjct: 161 AFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNA 220
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMD 426
+F+ + + WN +I G+ M A F MP+KN VSW TMISGY + G +
Sbjct: 221 CSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQ 280
Query: 427 SAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK--KPDQSTFXXXXXX 484
SAE +F+ M +++ + ++++I + QN DALK M +PD+ T
Sbjct: 281 SAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSA 340
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
G + YI + G D +S +LI +Y K G A ++F+ + D +S+
Sbjct: 341 NSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSY 400
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
+++I G +NG A EA F M+ +++ P+ VTF G+LSA SH+GL +G F M +
Sbjct: 401 SAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-K 459
Query: 605 DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGE 664
D +EP A+HY +VD+LGR GRLEEA+ +++ M ++ NAG+WG+LL A +H N+E GE
Sbjct: 460 DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGE 519
Query: 665 FAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
A +LE L+ +++ GRW++ +R +++K+ K GCSW+E
Sbjct: 520 IACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 179/320 (55%), Gaps = 15/320 (4%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVS 194
++ Y+R G +E A++ + + +K +T WN+++ GY + G+ +A +VF+ +P KD VS
Sbjct: 145 LVGLYSRLGYIELAKKAFDDIAEK-NTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVS 203
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNA 254
+N +++ Y + G MG A F M K+ SWN+++ G+VN ++ AR F+ +P N
Sbjct: 204 WNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNG 263
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK 314
VSW+TM+ G+ + G + A LF M K+ + ++AMIA Y Q+ + +A+KLF +M +
Sbjct: 264 VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLER 323
Query: 315 ------DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVD 364
D ++ +++++ ++G V + + I + L + LI + G
Sbjct: 324 NSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFA 383
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYA 420
+A KMF+ L+ +DT+ +++MI G +G EA LF M +K N V++ ++S Y+
Sbjct: 384 KAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYS 443
Query: 421 QAGQMDSAENIFQAMEERNI 440
+G + F +M++ N+
Sbjct: 444 HSGLVQEGYKCFNSMKDHNL 463
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 194/407 (47%), Gaps = 62/407 (15%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
+LG +E A + F + KN V++NS++ + ++G++ +AR++FDK+ +++ VSWN +I+
Sbjct: 151 RLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISS 210
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAV 167
Y + A LF MP + SW ++I Y +++ AR + +P K + W +
Sbjct: 211 YAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQK-NGVSWITM 269
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN----- 222
I+GY K G AE++F LM KD + Y++M+A YTQNGK AL F +M E+N
Sbjct: 270 ISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
Query: 223 -------VVSWN-----------------------------LMVSGFVNSGDLSSARQLF 246
VVS N ++ ++ GD + A ++F
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 389
Query: 247 EKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQID 302
+ + VS+ M+ G +G TEA LF +M K NVV++ +++AY+ +
Sbjct: 390 SNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQ 449
Query: 303 EAVKLFIKM------PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA---AETAL 353
E K F M P D + +++ R G+L+EA E+ MP + A L
Sbjct: 450 EGYKCFNSMKDHNLEPSAD--HYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLL 507
Query: 354 MSGL---IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
SGL ++ G + A +L T T + + + GR D+A
Sbjct: 508 ASGLHNNVEFGEI--ACSHCVKLETDPTGYLSHLAMIYSSVGRWDDA 552
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 156/322 (48%), Gaps = 45/322 (13%)
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
Y++ G + LA F+ +AEKN VSWN ++ G++ SG+L AR++F+KIP +AVSW ++
Sbjct: 149 YSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLII 208
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTT 321
+A+ G + A LF +MP K+ SWN +I Y ++ A F MP K+GVSW T
Sbjct: 209 SSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWIT 268
Query: 322 IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----- 376
+I+GY ++G + A E++ M KD A+++ Q G+ +A K+F Q+ R
Sbjct: 269 MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQ 328
Query: 377 ------------------------------------DTICWNSMIAGFCQSGRMDEALDL 400
D + S+I + + G +A +
Sbjct: 329 PDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKM 388
Query: 401 FRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLY 456
F + KK++VS++ MI G G A ++F AM E+ N+V++ L++ + + L
Sbjct: 389 FSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLV 448
Query: 457 FDALKSLVLMGREGKKPDQSTF 478
+ K M +P +
Sbjct: 449 QEGYKCFNSMKDHNLEPSADHY 470
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 187/364 (51%), Gaps = 22/364 (6%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSW 132
++ ++++ G I A++ FD ++++N VSWN+++ GYL + ++EA ++FD +PE+D SW
Sbjct: 145 LVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSW 204
Query: 133 ALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL 192
L+I+ Y +KG + A L +P K A WN +I GY + A F+ MP K+
Sbjct: 205 NLIISSYAKKGDMGNACSLFSAMPLK-SPASWNILIGGYVNCREMKLARTYFDAMPQKNG 263
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI--- 249
VS+ +M++GYT+ G + A F M++K+ + ++ M++ + +G A +LF ++
Sbjct: 264 VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLER 323
Query: 250 ---PNPNAVSWVTMLC-----GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQI 301
P+ ++ +++ G G E+ + +++S ++I Y +
Sbjct: 324 NSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLS-TSLIDLYMKGGDF 382
Query: 302 DEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI--- 358
+A K+F + KD VS++ +I G G EA ++ M K I +GL+
Sbjct: 383 AKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAY 442
Query: 359 -QTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSW 412
+G V E K FN + + + M+ ++GR++EA +L + MP + N+ W
Sbjct: 443 SHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVW 502
Query: 413 NTMI 416
++
Sbjct: 503 GALL 506
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 215/712 (30%), Positives = 349/712 (49%), Gaps = 76/712 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----E 126
+++ ++ K + ARQ+FDKM +++V+WNTM++G N A LF M +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELVPDK-LDTACWNAVIAGYAKKGQFSDAEKVFN 185
D+ S +I ++ K + R L LV K A + +I Y AE VF
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFE 258
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSS 241
+ KD S+ +M+A Y NG L F+ M +V V+ + GDL
Sbjct: 259 EVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVK 318
Query: 242 ARQLFEKIPNPNAVSWVT----MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
+ + + V+ ++ +++ G++ A +LF ++ ++VVSW+AMIA+Y Q
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 298 DLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE--- 350
Q DEA+ LF M + V+ T+++ G V + ++ DI +E
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 351 -TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
TA++S + GR A K F +L +D + +N++ G+ Q G ++A D+++ M K +
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM-KLHG 497
Query: 410 VSWN--TMI---------SGYAQA----GQM-----DSAENIFQAME------------- 436
V + TM+ S YA+ GQ+ DS ++ A+
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 437 --------ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX 488
E++ VSWN ++ G+L + +A+ + M E +P+ TF
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAEL 617
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
+VG +H +++ G+ + V N+L+ MYAKCG +ES+E+ F I ++SWN+++
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAI 608
S YA +G A A F M E+ PD V+F+ +LSAC HAGL +G +F+ M E I
Sbjct: 678 SAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKI 737
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAM 668
E EHY+C+VDLLG+ G EA ++R M VK + G+WG+LL + R+H NL + A
Sbjct: 738 EAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALC 797
Query: 669 RLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEV 720
+L +LEP N S+Y ++ R EV + R K+P CSWIEV
Sbjct: 798 QLVKLEPLNPSHY-------SQDRRLGEVNNV------SRIKKVPACSWIEV 836
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 167/746 (22%), Positives = 317/746 (42%), Gaps = 141/746 (18%)
Query: 56 VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVE 115
++V + I L +N +I+ ++ + +R +FD + +V WN+MI GY +
Sbjct: 22 LQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHR 81
Query: 116 EASKLFDVMPER-----DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAV 167
EA F M E D +S+ + +K + +L+ + + D A+
Sbjct: 82 EALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTAL 141
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-----KN 222
+ Y K A +VF+ M VKD+V++N+M++G QNG AL F M +
Sbjct: 142 VEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDH 201
Query: 223 VVSWNLMVS--------------------GFV------------NSGDLSSARQLFEKIP 250
V +NL+ + GF+ N DL +A +FE++
Sbjct: 202 VSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVW 261
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMP----------------------------- 281
+ SW TM+ +A +G E LFD M
Sbjct: 262 RKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIA 321
Query: 282 ----------CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGK 331
+V ++++ Y++ +++ A +LFI + +D VSW+ +I Y + G+
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL----------STRDTICW 381
DEA ++ M I ++ ++Q AS++ + S +T
Sbjct: 382 HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA-- 439
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
++I+ + + GR AL F ++P K++V++N + GY Q G + A ++++ M+ +
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
+ + G LQ + G+ ++ I
Sbjct: 500 PDSRTMVGMLQTCAFCSDYAR-------------------------------GSCVYGQI 528
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC---VDLISWNSLISGYALNGYAI 558
+K G+ ++ V++ALI M+ KC + +A +F +C +SWN +++GY L+G A
Sbjct: 529 IKHGFDSECHVAHALINMFTKCDALAAAIVLFD--KCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE-DFAIE-PLAEHYS 616
EA F+QM E+ P+ VTF+ ++ A + G+ + +++ F + P+
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNS-- 644
Query: 617 CLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH--KNLEIGEFAAMRLSELE 674
LVD+ + G +E + + K W ++L A H + + F +M+ +EL+
Sbjct: 645 -LVDMYAKCGMIESSEKCFIEISNKYIVS-WNTMLSAYAAHGLASCAVSLFLSMQENELK 702
Query: 675 PHNASNYITLSNMHAEAGRWEEVERL 700
P + S ++++ + AG EE +R+
Sbjct: 703 PDSVS-FLSVLSACRHAGLVEEGKRI 727
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 289 bits (740), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 264/476 (55%), Gaps = 9/476 (1%)
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-----WTTIINGYIRVGKLDEARE- 337
NV +NA+ + +++L+++M +D VS +++++ + E+ +
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRML-RDSVSPSSYTYSSLVKASSFASRFGESLQA 893
Query: 338 -VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
++ + +T L+ TGR+ EA K+F+++ RD I W +M++ + + MD
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDS 953
Query: 397 ALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
A L QM +KN + N +I+GY G ++ AE++F M ++I+SW ++I G+ QN Y
Sbjct: 954 ANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRY 1013
Query: 457 FDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
+A+ M EG PD+ T ++G ++H Y L++G++ D+++ +AL
Sbjct: 1014 REAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSAL 1073
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
+ MY+KCG +E A VF + +L WNS+I G A +G+A EA K F +M E V P+
Sbjct: 1074 VDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNA 1133
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
VTF+ + +AC+HAGL ++G +++ M++D++I EHY +V L + G + EA ++
Sbjct: 1134 VTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIG 1193
Query: 637 GMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
M+ + NA +WG+LL CR+HKNL I E A +L LEP N+ Y L +M+AE RW +
Sbjct: 1194 NMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRD 1253
Query: 697 VERLRVLMRDKRAGKL-PGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHM 751
V +R MR+ K+ PG S I + + F + D + + ++L+ I M
Sbjct: 1254 VAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQM 1309
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 189/415 (45%), Gaps = 57/415 (13%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N I+ ++ A +M + N+ +N + G++ S + +L+ V RD+
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELY-VRMLRDSV 867
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLDTACW-----------NAVIAGYAKKGQFSD 179
S + YT L KA + L W +I Y+ G+ +
Sbjct: 868 S----PSSYTYSS-LVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIRE 922
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A KVF+ MP +D +++ +M++ Y + M A +M+EKN + N +++G++ G+L
Sbjct: 923 ARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNL 982
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
A LF ++P + +SW TM+ G++++ + EA +F M + ++
Sbjct: 983 EQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII------------- 1029
Query: 300 QIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVY----NQMPCKDIAAETALMS 355
D V+ +T+I+ +G L+ +EV+ D+ +AL+
Sbjct: 1030 --------------PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVD 1075
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVS 411
+ G ++ A +F L ++ CWNS+I G G EAL +F +M K N+V+
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 1135
Query: 412 WNTMISGYAQAGQMDSAENIFQAM-EERNIVS----WNSLITGFLQNSLYFDALK 461
+ ++ + AG +D I+++M ++ +IVS + ++ F + L ++AL+
Sbjct: 1136 FVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALE 1190
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 33 GKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDK 92
G HV + I G++ EA +VF ++ + + +M+S + + + A L ++
Sbjct: 901 GFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQ 960
Query: 93 MSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA---- 148
MS++N + N +I GY+ +E+A LF+ MP +D SW MI Y++ + +A
Sbjct: 961 MSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVF 1020
Query: 149 RELLE--LVPDKLDTACWNAVIAGYAKKGQFSDAEKV--FNLMP--VKDLVSYNSMLAGY 202
+++E ++PD++ + VI+ A G ++V + L V D+ ++++ Y
Sbjct: 1021 YKMMEEGIIPDEVTMS---TVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMY 1077
Query: 203 TQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWV 258
++ G + AL F + +KN+ WN ++ G G A ++F K+ PNAV++V
Sbjct: 1078 SKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFV 1137
Query: 259 TMLCGFARHGKITEARRLFDSM-----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP- 312
++ G + E RR++ SM NV + M+ +++ I EA++L M
Sbjct: 1138 SVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEF 1197
Query: 313 HKDGVSWTTIING 325
+ V W +++G
Sbjct: 1198 EPNAVIWGALLDG 1210
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 141/359 (39%), Gaps = 71/359 (19%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
N I+ ++D A + M+E N+ +N+L GF+ S +L+ V M R+
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P S++ + G L +I K G+ + + LI Y+ GR+ A +V
Sbjct: 869 P--SSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKV 926
Query: 533 FTAIECVDLISWNSLISGYA--------------------------LNGYA-----IEAF 561
F + D I+W +++S Y +NGY +A
Sbjct: 927 FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAE 986
Query: 562 KAFKQM-------------------------------LSEEVVPDQVTFIGMLSACSHAG 590
F QM + E ++PD+VT ++SAC+H G
Sbjct: 987 SLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLG 1046
Query: 591 LANQGLDLFKCMVED-FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
+ G ++ +++ F ++ S LVD+ + G LE A V + K N W S
Sbjct: 1047 VLEIGKEVHMYTLQNGFVLDVYIG--SALVDMYSKCGSLERALLVFFNLP-KKNLFCWNS 1103
Query: 650 LLGACRVHKNLE--IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
++ H + + FA M + ++P NA ++++ AG +E R+ M D
Sbjct: 1104 IIEGLAAHGFAQEALKMFAKMEMESVKP-NAVTFVSVFTACTHAGLVDEGRRIYRSMID 1161
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNT 103
K G +E A+ VF N KNL +NS+I A +G +A ++F KM + N V++ +
Sbjct: 1079 KCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVS 1138
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFS-------WALMITCYTRKGKLEKARELLELVP 156
+ H +V+E +++ M D++S + M+ +++ G + +A EL+ +
Sbjct: 1139 VFTACTHAGLVDEGRRIYRSMI--DDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNME 1196
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV 189
+ + W A++ G AE FN + V
Sbjct: 1197 FEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMV 1229
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 289 bits (739), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 277/519 (53%), Gaps = 18/519 (3%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSW 319
+ GK+ +A R+ + ++ +I + +A+++ + +D
Sbjct: 56 LCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLA 115
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL------ 373
T +I Y +G +D AR+V+++ + I AL L G +E ++ ++
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 374 STRDTICW--NSMIAGFCQSGRMDEALDLFRQMPKKNSVS----WNTMISGYAQAGQMDS 427
S R T + + +A C + + ++ + ++ S T++ YA+ G +D
Sbjct: 176 SDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDY 235
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK--KPDQSTFXXXXXXX 485
A +F M RN+VSW+++I + +N F+AL++ M RE K P+ T
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWN 545
+ G +H YIL+ G + L V +AL+ MY +CG++E ++VF + D++SWN
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
SLIS Y ++GY +A + F++ML+ P VTF+ +L ACSH GL +G LF+ M D
Sbjct: 356 SLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRD 415
Query: 606 FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEF 665
I+P EHY+C+VDLLGR RL+EA +V+ M + +WGSLLG+CR+H N+E+ E
Sbjct: 416 HGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475
Query: 666 AAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQ 725
A+ RL LEP NA NY+ L++++AEA W+EV+R++ L+ + KLPG W+EV+ ++
Sbjct: 476 ASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMY 535
Query: 726 CFLSDDSGRLRPETIQIILNAISAHMRDKFNVFNMQSVF 764
F+S D E I L ++ M++K + + V
Sbjct: 536 SFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVL 574
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 213/488 (43%), Gaps = 80/488 (16%)
Query: 27 TIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSN------------------------- 61
+I S G + N NQ I L K GK+++A+RV S
Sbjct: 38 SISSGAGAKISN-NQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDA 96
Query: 62 -TIHKNLVTYNS---------MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN 111
+H++++ S +I +++ G + AR++FDK +R + WN +
Sbjct: 97 LRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLA 156
Query: 112 SMVEEASKLF----DVMPERDNFSWALMI-TCYTRK---GKLEKAREL-LELVPDKLDTA 162
EE L+ + E D F++ ++ C + L K +E+ L +
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 163 CW--NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF-EKMA 219
+ ++ YA+ G A VF MPV+++VS+++M+A Y +NGK AL F E M
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 220 EKNVVSWN--LMVSGFVNSGDLSSARQ------------LFEKIPNPNAVSWVTMLCGFA 265
E S N MVS L++ Q L +P +A+ VTM +
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL--VTM---YG 331
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTT 321
R GK+ +R+FD M ++VVSWN++I++Y +A+++F +M V++ +
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 322 IINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLI-QTGRVDEASKMFNQLSTR 376
++ G ++E + ++ M K A M L+ + R+DEA+KM + T
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 377 D-TICWNSMIAGFCQSGRMDEALDLFRQ---MPKKNSVSWNTMISGYAQAGQMDSAENIF 432
W S++ G ++ A R+ + KN+ ++ + YA+A D + +
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511
Query: 433 QAMEERNI 440
+ +E R +
Sbjct: 512 KLLEHRGL 519
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 160/393 (40%), Gaps = 36/393 (9%)
Query: 14 NHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSM 73
NH +K + LT HV+ + + G V+ A VF +N+V++++M
Sbjct: 196 NHLMKGKEIHAHLTRRGYSS-HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 74 ISVFAKNGKISDARQLFDKM------SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
I+ +AKNGK +A + F +M S N V+ +++ + +E+ + + R
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 128 DNFS----WALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKV 183
S + ++T Y R GKLE + + + + D+ D WN++I+ Y G A ++
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR-DVVSWNSLISSYGVHGYGKKAIQI 373
Query: 184 FNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-----AEKNVVSWNLMVSGFV 234
F M V++ S+L + G + FE M + + + MV
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 235 NSGDLSSARQLFEKI-PNPNAVSWVTMLCGFARHGKITEA----RRLFDSMPCKNVVSWN 289
+ L A ++ + + P W ++L HG + A RRLF P KN ++
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP-KNAGNYV 492
Query: 290 AMIAAYAQDLQIDEAVKLFIKMPHK-----DGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
+ YA+ DE ++ + H+ G W + +DE + Q+
Sbjct: 493 LLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIH- 551
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTRD 377
A L + + G + + + +L T +
Sbjct: 552 ---AFLVKLAEDMKEKGYIPQTKGVLYELETEE 581
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 272/531 (51%), Gaps = 46/531 (8%)
Query: 270 ITEARRLFDSMPCKN-VVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-----DGVSWTT-- 321
I AR+LFD P ++ N+MI AY + Q ++ L+ + + D ++TT
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 322 ---------------------------------IINGYIRVGKLDEAREVYNQMPCKDIA 348
+++ Y + GK+ AR +++MP +
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 349 AETALMSGLIQTGRVDEASKMFNQLS-TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
+ TAL+SG I+ G +D ASK+F+Q+ +D + +N+M+ GF +SG M A LF +M K
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM- 466
++W TMI GY +D+A +F AM ERN+VSWN++I G+ QN + ++ M
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
PD T +G H ++ + + V A++ MY+KCG +
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 527 ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
E A+++F + + SWN++I GYALNG A A F M+ EE PD++T + +++AC
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDEITMLAVITAC 384
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
+H GL +G F M E + EHY C+VDLLGR G L+EA +++ M + N +
Sbjct: 385 NHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 443
Query: 647 WGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
S L AC +K++E E + ELEP N NY+ L N++A RW++ ++ +MR
Sbjct: 444 LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 503
Query: 707 KRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHM-RDKFN 756
+A K GCS IE+ + F+S D+ +I ++L + HM +K+N
Sbjct: 504 NQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKYN 554
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 201/403 (49%), Gaps = 24/403 (5%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRN--LVSWNTMIAGYLHNSMVE 115
+ + I N+ + + + A I AR+LFD+ QR+ +S N+MI YL
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 116 EASKLF-DVMPER----DNFSWALMITCYTRKGKLEKARELLELV---PDKLDTACWNAV 167
++ L+ D+ E DNF++ + + + + +L + D V
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-KNVVSW 226
+ YAK G+ A F+ MP + VS+ ++++GY + G++ LA F++M K+VV +
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIY 179
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
N M+ GFV SGD++SAR+LF+++ + ++W TM+ G+ I AR+LFD+MP +N+V
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMP-----HKDGVSWTTIINGYIRVGKLDEAR----E 337
SWN MI Y Q+ Q E ++LF +M D V+ +++ G L
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 338 VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
V + K + TA++ + G +++A ++F+++ + WN+MI G+ +G A
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 398 LDLFRQM---PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
LDLF M K + ++ +I+ G ++ F M E
Sbjct: 360 LDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE 402
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 154/315 (48%), Gaps = 20/315 (6%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ-RNLVSWNTMI 105
K GK+ A F H++ V++ ++IS + + G++ A +LFD+M +++V +N M+
Sbjct: 124 AKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMM 183
Query: 106 AGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWN 165
G++ + + A +LFD M + +W MI Y ++ AR+L + +P++ + WN
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPER-NLVSWN 242
Query: 166 AVIAGYAKKGQFSDAEKVFNLMPV-----KDLVSYNSMLAGYTQNGKMGLA--LHFF--E 216
+I GY + Q + ++F M D V+ S+L + G + L H F
Sbjct: 243 TMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR 302
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
K +K V ++ + G++ A+++F+++P SW M+ G+A +G A L
Sbjct: 303 KKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDL 362
Query: 277 FDSMPCK---NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-----WTTIINGYIR 328
F +M + + ++ A+I A ++E K F M + G++ + +++ R
Sbjct: 363 FVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGR 421
Query: 329 VGKLDEAREVYNQMP 343
G L EA ++ MP
Sbjct: 422 AGSLKEAEDLITNMP 436
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 23/316 (7%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G + A R+F HK ++T+ +MI + I AR+LFD M +RNLVSWNTMI G
Sbjct: 188 KSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGG 247
Query: 108 YLHNSMVEEASKLFDVMP-----ERDNFSWALMITCYTRKGKLEKARELLELVP----DK 158
Y N +E +LF M + D+ + ++ + G L V DK
Sbjct: 248 YCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDK 307
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
C A++ Y+K G+ A+++F+ MP K + S+N+M+ GY NG AL F M
Sbjct: 308 KVKVC-TAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366
Query: 219 ---AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKIT 271
+ + ++ +++ + G + R+ F + N + M+ R G +
Sbjct: 367 MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLK 426
Query: 272 EARRLFDSMPCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGY 326
EA L +MP + N + ++ ++A Q I+ A ++ K P DG ++ + N Y
Sbjct: 427 EAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDG-NYVLLRNLY 485
Query: 327 IRVGKLDEAREVYNQM 342
+ D+ V N M
Sbjct: 486 AADKRWDDFGMVKNVM 501
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 288 bits (737), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/544 (30%), Positives = 283/544 (52%), Gaps = 56/544 (10%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTII 323
G IT AR++FD +P + WNA+I Y+++ +A+ ++ M D ++ ++
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFN--QLSTRD 377
+ L R V+ Q+ A+ + +GLI + R+ A +F L R
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKKNS---------------------------- 409
+ W ++++ + Q+G EAL++F QM K +
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 410 --------------VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL 455
+S NTM YA+ GQ+ +A+ +F M+ N++ WN++I+G+ +N
Sbjct: 247 SVVKMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 456 YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
+A+ M + +PD + + ++EY+ +S Y +D+F+S+A
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
LI M+AKCG VE A VF D++ W+++I GY L+G A EA ++ M V P+
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 576 QVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
VTF+G+L AC+H+G+ +G F M D I P +HY+C++DLLGR G L++A+ V+
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 636 RGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
+ M V+ +WG+LL AC+ H+++E+GE+AA +L ++P N +Y+ LSN++A A W+
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542
Query: 696 EVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDKF 755
V +RV M++K K GCSW+EV+ +++ F D R E I+ + I + +++
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Query: 756 NVFN 759
V N
Sbjct: 603 FVAN 606
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 207/428 (48%), Gaps = 37/428 (8%)
Query: 45 HLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
H +L ++ + V L+T +I + G I+ ARQ+FD + + + WN +
Sbjct: 33 HKAQLKQIHARLLVLGLQFSGFLIT--KLIHASSSFGDITFARQVFDDLPRPQIFPWNAI 90
Query: 105 IAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAR----ELLELVP 156
I GY N+ ++A ++ M D+F++ ++ + L+ R ++ L
Sbjct: 91 IRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF 150
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV--KDLVSYNSMLAGYTQNGKMGLALHF 214
D D N +IA YAK + A VF +P+ + +VS+ ++++ Y QNG+ AL
Sbjct: 151 DA-DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 215 FEKMAEKNV-VSWNLMVS---GFVNSGDLSSARQLFEKIPN------PNAVSWVTMLCGF 264
F +M + +V W +VS F DL R + + P+ + +++ +
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL--ISLNTMY 267
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWT 320
A+ G++ A+ LFD M N++ WNAMI+ YA++ EA+ +F +M +K D +S T
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTR 376
+ I+ +VG L++AR +Y + D + + S LI + G V+ A +F++ R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIF 432
D + W++MI G+ GR EA+ L+R M + N V++ ++ +G + F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 433 QAMEERNI 440
M + I
Sbjct: 448 NRMADHKI 455
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 3/199 (1%)
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+I + G + A +F + I WN++I G+ +N+ + DAL M PD
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
TF Q+G +H + + G+ D+FV N LIA+YAKC R+ SA VF
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 535 AIECVD--LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
+ + ++SW +++S YA NG +EA + F QM +V PD V + +L+A +
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 593 NQGLDLFKCMVE-DFAIEP 610
QG + +V+ IEP
Sbjct: 239 KQGRSIHASVVKMGLEIEP 257
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 32/327 (9%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF----- 121
L++ N+M +AK G+++ A+ LFDKM NL+ WN MI+GY N EA +F
Sbjct: 260 LISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 122 -DVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQF 177
DV P D S I+ + G LE+AR + E V + D +A+I +AK G
Sbjct: 317 KDVRP--DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV--- 234
A VF+ +D+V +++M+ GY +G+ A+ + M V ++ G +
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Query: 235 -NSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSW 288
+SG + F ++ NP + ++ R G + +A + MP + V W
Sbjct: 435 NHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 289 NAMIAAYAQDLQID----EAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMP- 343
A+++A + ++ A +LF P G + + N Y D EV +M
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTG-HYVQLSNLYAAARLWDRVAEVRVRMKE 553
Query: 344 ---CKDIAAETALMSGLIQTGRVDEAS 367
KD+ + G ++ RV + S
Sbjct: 554 KGLNKDVGCSWVEVRGRLEAFRVGDKS 580
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 158/365 (43%), Gaps = 33/365 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWN 102
K G+V A +F NL+ +N+MIS +AKNG +A +F +M +++ +S
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDN----FSWALMITCYTRKGKLEKARELLELVPDK 158
+ I+ +E+A +++ + D F + +I + + G +E AR + + D+
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHF 214
D W+A+I GY G+ +A ++ M + V++ +L +G + F
Sbjct: 388 -DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 215 FEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTML--CGFARH 267
F +MA+ + + ++ +G L A ++ + +P P W +L C RH
Sbjct: 447 FNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 268 GKITE--ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD-----GVSWT 320
++ E A++LF P N + + YA D ++ ++M K G SW
Sbjct: 507 VELGEYAAQQLFSIDP-SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Query: 321 TIINGY--IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDT 378
+ RVG D++ Y ++ + E+ L G + D + N +T
Sbjct: 566 EVRGRLEAFRVG--DKSHPRYEEIERQVEWIESRLKEGGFVANK-DASLHDLNDEEAEET 622
Query: 379 ICWNS 383
+C +S
Sbjct: 623 LCSHS 627
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 96/238 (40%), Gaps = 44/238 (18%)
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
Q+H +L G F+ LI + G + A QVF + + WN++I GY+ N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS-----------HAGLANQGLD------- 597
+ +A + M V PD TF +L ACS HA + G D
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 598 -----LFKC-----MVEDFAIEPLAEH----YSCLVDLLGRMGRLEEA---FNVVRGMDV 640
KC F PL E ++ +V + G EA F+ +R MDV
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 641 KANAGLWGSLLGACRVHKNLEIGE-----FAAMRLSELEPHNASNYITLSNMHAEAGR 693
K + S+L A ++L+ G M L E+EP I+L+ M+A+ G+
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL-EIEP---DLLISLNTMYAKCGQ 272
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/648 (28%), Positives = 321/648 (49%), Gaps = 60/648 (9%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AE 220
N ++ Y K G A +F+ MP +D VS+N+M++GYT GK+ A F M ++
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 221 KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKITEARRL 276
+ S++ ++ G + Q+ + N +++ +A+ ++ +A
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS--------WTTIINGYIR 328
F + N VSWNA+IA + Q I A L M K V+ T+++ +
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF 218
Query: 329 VGKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLS-TRDTICWNSMIA 386
L + ++ + +I A++S G V +A ++F+ L ++D I WNSMIA
Sbjct: 219 CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Query: 387 GFCQSGRMDEALDLFRQMPK---------------------------------------K 407
GF + + A +LF QM + +
Sbjct: 279 GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ 338
Query: 408 NSVSWNTMISGYAQ--AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+ + N +IS Y Q G M+ A ++F++++ ++++SWNS+ITGF Q L DA+K
Sbjct: 339 VTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSY 398
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
+ K D F Q+G Q+H KSG++++ FV ++LI MY+KCG
Sbjct: 399 LRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGI 458
Query: 526 VESAEQVFTAIECV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
+ESA + F I ++WN++I GYA +G + F QM ++ V D VTF +L+
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILT 518
Query: 585 ACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANA 644
ACSH GL +GL+L M + I+P EHY+ VDLLGR G + +A ++ M + +
Sbjct: 519 ACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDP 578
Query: 645 GLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLM 704
+ + LG CR +E+ A L E+EP + Y++LS+M+++ +WEE ++ +M
Sbjct: 579 MVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMM 638
Query: 705 RDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
+++ K+PG SWIE++NQ++ F ++D + I +++ ++ M+
Sbjct: 639 KERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 206/410 (50%), Gaps = 46/410 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
N+ +S++ ++AK ++ DA + F ++S+ N VSWN +IAG++ ++ A L +M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 126 ER-----DNFSWALMIT-------CYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAK 173
+ D ++A ++T C K + ++L+L T C NA+I+ YA
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLK---QVHAKVLKLGLQHEITIC-NAMISSYAD 250
Query: 174 KGQFSDAEKVFN-LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNL 228
G SDA++VF+ L KDL+S+NSM+AG++++ A F +M E ++ ++
Sbjct: 251 CGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTG 310
Query: 229 MVSG--------FVNSGDLSSARQLFEKIPNP-NAVSWVTMLCGFARHGKITEARRLFDS 279
++S F S ++ E++ + NA+ ++M F G + +A LF+S
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNAL--ISMYIQFPT-GTMEDALSLFES 367
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEA 335
+ K+++SWN++I +AQ ++AVK F + D +++ ++ + L
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427
Query: 336 REVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQ 390
++++ + ++S LI + G ++ A K F Q+S++ T+ WN+MI G+ Q
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 487
Query: 391 SGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAME 436
G +LDLF QM +N V++ +++ + G + + ME
Sbjct: 488 HGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 220/504 (43%), Gaps = 77/504 (15%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
++ N ++ + K G + A LFD+M +R+ VSWNTMI+GY +E+A LF M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 125 ---PERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFS 178
+ D +S++ ++ + + ++ LV + + ++++ YAK +
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL-----MVSGF 233
DA + F + + VS+N+++AG+ Q + A M K V+ + +++
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 234 VNSGDLSSARQLFEKIPNPNAVSWVT----MLCGFARHGKITEARRLFDSM-PCKNVVSW 288
+ + +Q+ K+ +T M+ +A G +++A+R+FD + K+++SW
Sbjct: 214 DDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISW 273
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI- 347
N+MIA +++ + A +LFI+M W + Y G L +Q+ K +
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRH----WVE-TDIYTYTGLLSACSGEEHQIFGKSLH 328
Query: 348 ------------AAETALMSGLIQ--TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
+A AL+S IQ TG +++A +F L ++D I WNS+I GF Q G
Sbjct: 329 GMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGL 388
Query: 394 MDEALDLFRQMPK---------------------------------------KNSVSWNT 414
++A+ F + N ++
Sbjct: 389 SEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISS 448
Query: 415 MISGYAQAGQMDSAENIFQAMEERN-IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
+I Y++ G ++SA FQ + ++ V+WN++I G+ Q+ L +L M + K
Sbjct: 449 LIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKL 508
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQL 497
D TF Q G +L
Sbjct: 509 DHVTFTAILTACSHTGLIQEGLEL 532
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 31/178 (17%)
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ 433
S D N ++ + + G + A LF +MPK++SVSWNTMISGY G+++ A +F
Sbjct: 31 SISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFT 90
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
M+ R G D +F +
Sbjct: 91 CMK-------------------------------RSGSDVDGYSFSRLLKGIASVKRFDL 119
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
G Q+H ++K GY +++V ++L+ MYAKC RVE A + F I + +SWN+LI+G+
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 125/276 (45%), Gaps = 33/276 (11%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLG---KLGKVEEAVRVFSNTIHKNLV 68
GE H+I S+ H + I G + V + +I + G +E+A+ +F + K+L+
Sbjct: 317 GEEHQIFGKSL-HGMVIKK-GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER- 127
++NS+I+ FA+ G DA + F + + + Y ++++ S L + +
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEI-----KVDDYAFSALLRSCSDLATLQLGQQ 429
Query: 128 ------------DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKG 175
+ F + +I Y++ G +E AR+ + + K T WNA+I GYA+ G
Sbjct: 430 IHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Query: 176 QFSDAEKVFNLMP---VK-DLVSYNSMLAGYTQNGKMGLALHFFEKMA-----EKNVVSW 226
+ +F+ M VK D V++ ++L + G + L M + + +
Sbjct: 490 LGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHY 549
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTML 261
V +G ++ A++L E +P NP+ + T L
Sbjct: 550 AAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFL 585
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYA 557
H Y +K G I+D++VSN ++ Y K G + A +F + D +SWN++ISGY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSC 617
+A+ F M D +F +L + + G + +++ E S
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGSS 141
Query: 618 LVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
LVD+ + R+E+AF + + + N+ W +L+
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAG 176
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/543 (30%), Positives = 276/543 (50%), Gaps = 58/543 (10%)
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGV 317
CG R G+I+ AR++FD +P + V +N+MI Y++ DE ++L+ +M D
Sbjct: 60 CG--RIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSS 117
Query: 318 SWTTIINGYIRVGKLDEAREVYNQMPCK--------DIAAETALMSGLIQTGRVDEASKM 369
++T I + L++ V+ CK D+ +++++ ++ G++DEA +
Sbjct: 118 TFTMTIKACLSGLVLEKGEAVW----CKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVL 173
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK---------------------- 407
F +++ RD ICW +M+ GF Q+G+ +A++ +R+M +
Sbjct: 174 FGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDT 233
Query: 408 -----------------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGF 450
N V +++ YA+ G ++ A +F M + VSW SLI+GF
Sbjct: 234 KMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGF 293
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDL 510
QN L A +++V M G +PD T + G +H YILK ++ D
Sbjct: 294 AQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLDR 352
Query: 511 FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+ AL+ MY+KCG + S+ ++F + DL+ WN++IS Y ++G E F +M
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
+ PD TF +LSA SH+GL QG F M+ + I+P +HY CL+DLL R GR+EE
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEE 472
Query: 631 AFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAE 690
A +++ + +W +LL C H+NL +G+ AA ++ +L P + +SN A
Sbjct: 473 ALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFAT 532
Query: 691 AGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAH 750
A +W+EV ++R LMR+ K+PG S IEV +++ FL +D + +L +
Sbjct: 533 ANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTE 592
Query: 751 MRD 753
+RD
Sbjct: 593 IRD 595
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 188/389 (48%), Gaps = 26/389 (6%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PERD 128
+I+ + G+IS AR++FD++ QR + +N+MI Y +E +L+D M + D
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 129 NFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFN 185
+ ++ + I LEK + D K D ++V+ Y K G+ +AE +F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN-SGDLSSARQ 244
M +D++ + +M+ G+ Q GK A+ F+ +M + +++ G + SGDL +
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 245 -------LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
L+ N V +++ +A+ G I A R+F M K VSW ++I+ +AQ
Sbjct: 236 GRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 298 DLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK---DIAAE 350
+ ++A + ++M D V+ ++ +VG L R V+ + + D
Sbjct: 296 NGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA 355
Query: 351 TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN-- 408
TALM + G + + ++F + +D +CWN+MI+ + G E + LF +M + N
Sbjct: 356 TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIE 415
Query: 409 --SVSWNTMISGYAQAGQMDSAENIFQAM 435
++ +++S + +G ++ ++ F M
Sbjct: 416 PDHATFASLLSALSHSGLVEQGQHWFSVM 444
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 167/374 (44%), Gaps = 59/374 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE---- 126
+S+++++ K GK+ +A LF KM++R+++ W TM+ G+ +A + + M
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 127 RDNFSWALMITCYTRKGKLEKAREL---LELVPDKLDTACWNAVIAGYAKKGQFSDAEKV 183
RD ++ G + R + L ++ +++ YAK G A +V
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-------KNVVSWNLMVSGFVNS 236
F+ M K VS+ S+++G+ QN GLA FE + E ++V+ ++
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQN---GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 237 GDLSSARQLFEKIPNPNAVSWVT---MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIA 293
G L + R + I + + VT ++ +++ G ++ +R +F+ + K++V WN MI+
Sbjct: 332 GSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMIS 391
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
Y E V LF+KM N P D A +L
Sbjct: 392 CYGIHGNGQEVVSLFLKMTES-------------------------NIEP--DHATFASL 424
Query: 354 MSGLIQTGRVDEASKMFN--------QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+S L +G V++ F+ Q S + +C ++A ++GR++EALD+
Sbjct: 425 LSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLA---RAGRVEEALDMINSEK 481
Query: 406 KKNSVS-WNTMISG 418
N++ W ++SG
Sbjct: 482 LDNALPIWVALLSG 495
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+I+ + G++ A +F + +R + +NS+I + + + L+ M E +PD
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
STF + G + + GY ND+FV ++++ +Y KCG+++ AE +F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ D+I W ++++G+A G +++A + +++M +E D+V +G+L A G
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 595 GLDLFKCMVED-FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
G + + + + E + LVD+ ++G +E A V M K A WGSL+
Sbjct: 236 GRSVHGYLYRTGLPMNVVVE--TSLVDMYAKVGFIEVASRVFSRMMFK-TAVSWGSLI 290
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 126/257 (49%), Gaps = 24/257 (9%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
++ + N+V S++ ++AK G I A ++F +M + VSW ++I+G+ N + A
Sbjct: 243 LYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGL---A 299
Query: 118 SKLFDVMPERDNFSW--------ALMITCYTRKGKLEKARELLELVPDK--LDTACWNAV 167
+K F+ + E + + +++ C ++ G L+ R + + + LD A+
Sbjct: 300 NKAFEAVVEMQSLGFQPDLVTLVGVLVAC-SQVGSLKTGRLVHCYILKRHVLDRVTATAL 358
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV---- 223
+ Y+K G S + ++F + KDLV +N+M++ Y +G + F KM E N+
Sbjct: 359 MDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDH 418
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFD 278
++ ++S +SG + + F + N P+ +V ++ AR G++ EA + +
Sbjct: 419 ATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMIN 478
Query: 279 SMPCKNVVS-WNAMIAA 294
S N + W A+++
Sbjct: 479 SEKLDNALPIWVALLSG 495
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 24/241 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K+G +E A RVFS + K V++ S+IS FA+NG + A + +M Q +LV+
Sbjct: 263 AKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLV 322
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER---DNFSWALMITCYTRKGKLEKARELLELVPDKL 159
++ ++ + + +R D + ++ Y++ G L +RE+ E V K
Sbjct: 323 GVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRK- 381
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVF------NLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
D CWN +I+ Y G + +F N+ P D ++ S+L+ + +G + H
Sbjct: 382 DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP--DHATFASLLSALSHSGLVEQGQH 439
Query: 214 FFEKMAEKNVVS-----WNLMVSGFVNSGDLSSARQLF--EKIPNPNAVSWVTMLCGFAR 266
+F M K + + ++ +G + A + EK+ N + WV +L G
Sbjct: 440 WFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPI-WVALLSGCIN 498
Query: 267 H 267
H
Sbjct: 499 H 499
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 495 NQLHEYILKSG-YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
Q+H +++ +G +N +S LIA + G + A +VF + + +NS+I Y+
Sbjct: 34 TQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSR 93
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
E + + QM++E++ PD TF + AC +GL + + C DF +
Sbjct: 94 GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACL-SGLVLEKGEAVWCKAVDFGYKNDVF 152
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACRVHKNLEIGEF 665
S +++L + G+++EA V+ G K + W +++ G + K+L+ EF
Sbjct: 153 VCSSVLNLYMKCGKMDEA-EVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEF 204
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 105/213 (49%), Gaps = 30/213 (14%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
VT +++ +++K G +S +R++F+ + +++LV WNTMI+ Y + +E LF M E
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 128 ----DNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC----WNAVIAGYAKKGQFSD 179
D+ ++A +++ + G +E+ + ++ +K + +I A+ G+ +
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEE 472
Query: 180 A------EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL--MVS 231
A EK+ N +P+ + ++L+G + + + K+ + N S + +VS
Sbjct: 473 ALDMINSEKLDNALPI-----WVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVS 527
Query: 232 GFVNSG----DLSSARQL-----FEKIPNPNAV 255
F + +++ R+L EK+P +A+
Sbjct: 528 NFFATANKWKEVAKVRKLMRNGAMEKVPGYSAI 560
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 209/785 (26%), Positives = 370/785 (47%), Gaps = 104/785 (13%)
Query: 62 TIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF 121
T+ + S +S ++G ARQLFD + + V WNT+I G++ N++ EA +
Sbjct: 34 TLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFY 93
Query: 122 DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK----------------------- 158
M + F+ YT L+ E L K
Sbjct: 94 SRMKKTAPFTNC---DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMN 150
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+ +C NA ++ KVF+ M K++V++N++++ Y + G+ A F M
Sbjct: 151 MYVSCLNA-----PDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIM 205
Query: 219 AEKNV----VSWNLMVSGFVNSGDLSSARQLF--------EKIPNPNAVSWVTMLCGFAR 266
V VS+ + S + A + E + + VS + + +A
Sbjct: 206 MRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVS--SAISMYAE 263
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI-----KMPHKDGVSWTT 321
G I +RR+FDS +N+ WN MI Y Q+ + E+++LF+ K D V++
Sbjct: 264 LGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLL 323
Query: 322 IINGYIRVGKLDEAREV-------YNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS 374
+ + +++ R+ + ++P I +LM + G V ++ +F +
Sbjct: 324 AASAVSALQQVELGRQFHGFVSKNFRELP---IVIVNSLMVMYSRCGSVHKSFGVFLSMR 380
Query: 375 TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISG------------ 418
RD + WN+MI+ F Q+G DE L L +M K+ + ++ ++S
Sbjct: 381 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQ 440
Query: 419 ----------------------YAQAGQMDSAENIFQA--MEERNIVSWNSLITGFLQNS 454
Y+++G + ++ +F+ ER+ +WNS+I+G+ QN
Sbjct: 441 THAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNG 500
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
M + +P+ T +G QLH + ++ ++FV++
Sbjct: 501 HTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVAS 560
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
AL+ MY+K G ++ AE +F+ + + +++ ++I GY +G A F M + P
Sbjct: 561 ALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKP 620
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
D +TF+ +LSACS++GL ++GL +F+ M E + I+P +EHY C+ D+LGR+GR+ EA+
Sbjct: 621 DAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEF 680
Query: 635 VRGMDVKAN-AGLWGSLLGACRVHKNLEIGEFAAMRLSELEP-HNASNY-ITLSNMHAEA 691
V+G+ + N A LWGSLLG+C++H LE+ E + RL++ + N S Y + LSNM+AE
Sbjct: 681 VKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEE 740
Query: 692 GRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHM 751
+W+ V+++R MR+K K G S IE+ + CF+S D I +++ ++ M
Sbjct: 741 QKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDM 800
Query: 752 R-DKF 755
R D F
Sbjct: 801 RGDSF 805
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 199/456 (43%), Gaps = 78/456 (17%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ--------------------- 95
+VF N KN+V +N++IS + K G+ ++A + F M +
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 96 --------------------RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALM 135
++L ++ I+ Y +E + ++FD ER+ W M
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 136 ITCYTRKGKLEKARELL-------ELVPDKLDTACWNAVIAGYAK---KGQFSD-AEKVF 184
I Y + L ++ EL E+V D++ + ++ + QF K F
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG-DLSSAR 243
+P+ V NS++ Y++ G + + F M E++VVSWN M+S FV +G D
Sbjct: 349 RELPI---VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLM 405
Query: 244 QLFEKIPNPNAVSWVTMLCGFARH--------GKITEARRLFDSMPCKNVVSWNAMIAAY 295
++E + ++T+ + GK T A + + + + S+ +I Y
Sbjct: 406 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMY 463
Query: 296 AQDLQIDEAVKLF--IKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
++ I + KLF +D +W ++I+GY + G ++ V+ +M ++I
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 354 MSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAG-----FCQSGRMDEALDLFRQM 404
++ ++ Q G VD K + S R + N +A + ++G + A D+F Q
Sbjct: 524 VASILPACSQIGSVD-LGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
++NSV++ TMI GY Q G + A ++F +M+E I
Sbjct: 583 KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGI 618
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 203/439 (46%), Gaps = 56/439 (12%)
Query: 26 LTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISD 85
L +G K +F + I +LG +E + RVF + + +N+ +N+MI V+ +N + +
Sbjct: 241 LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 300
Query: 86 ARQLF-DKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGK 144
+ +LF + + + +VS D ++ L + + +
Sbjct: 301 SIELFLEAIGSKEIVS---------------------------DEVTYLLAASAVSALQQ 333
Query: 145 LEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG 201
+E R+ V +L N+++ Y++ G + VF M +D+VS+N+M++
Sbjct: 334 VELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISA 393
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS---------GDLSSARQLFEKIPNP 252
+ QNG L +M ++ + V+ +++ G + A + + I
Sbjct: 394 FVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE 453
Query: 253 NAVSWVTMLCGFARHGKITEARRLFD--SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
S++ + +++ G I +++LF+ ++ +WN+MI+ Y Q+ ++ +F K
Sbjct: 454 GMNSYLIDM--YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRK 511
Query: 311 MPHK----DGVSWTTIINGYIRVGKLDEAREVY----NQMPCKDIAAETALMSGLIQTGR 362
M + + V+ +I+ ++G +D ++++ Q +++ +AL+ + G
Sbjct: 512 MLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGA 571
Query: 363 VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISG 418
+ A MF+Q R+++ + +MI G+ Q G + A+ LF M K +++++ ++S
Sbjct: 572 IKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Query: 419 YAQAGQMDSAENIFQAMEE 437
+ +G +D IF+ M E
Sbjct: 632 CSYSGLIDEGLKIFEEMRE 650
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/673 (28%), Positives = 329/673 (48%), Gaps = 73/673 (10%)
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSD 179
++P D+ ++ M+ +K A+ + + K LD N ++ Y K G D
Sbjct: 43 IIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKD 102
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A +F+ MP ++ VS+ ++ GY +GL + E N + + FV+
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 240 SSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
L I + NA ++ ++ G + AR +F+ + CK++V W +++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 296 AQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQM--PCK--DI 347
++ ++++KL M + ++ T + I +G D A+ V+ Q+ C D
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM--- 404
L+ Q G + +A K+FN++ D + W+ MIA FCQ+G +EA+DLF +M
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 405 ---PKKNSVSW---------------------------------NTMISGYAQAGQMDSA 428
P + ++S N +I YA+ +MD+A
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 429 ENIFQAMEERNIVSWNSLITGFLQN--------SLYFDALKSLVLMGREGKKPDQSTFXX 480
+F + +N VSWN++I G+ +N S++ +AL++ V + + TF
Sbjct: 403 VKLFAELSSKNEVSWNTVIVGY-ENLGEGGKAFSMFREALRNQVSV-------TEVTFSS 454
Query: 481 XXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVD 540
+G Q+H +K+ + VSN+LI MYAKCG ++ A+ VF +E +D
Sbjct: 455 ALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETID 514
Query: 541 LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK 600
+ SWN+LISGY+ +G +A + M + P+ +TF+G+LS CS+AGL +QG + F+
Sbjct: 515 VASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFE 574
Query: 601 CMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNL 660
M+ D IEP EHY+C+V LLGR G+L++A ++ G+ + + +W ++L A N
Sbjct: 575 SMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNE 634
Query: 661 EIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEV 720
E +A + ++ P + + Y+ +SNM+A A +W V +R M++ K PG SWIE
Sbjct: 635 EFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEH 694
Query: 721 QNQIQCF---LSD 730
Q + F LSD
Sbjct: 695 QGDVHYFSVGLSD 707
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 203/501 (40%), Gaps = 138/501 (27%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY-------LHNSMVEEAS 118
+L N +++ + K G DA LFD+M +RN VS+ T+ GY L++ + E
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 119 -----------KLF------DVMP-----------ERDNFSWALMITCYTRKGKLEKARE 150
KLF ++ P + + F A +I Y+ G ++ AR
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 151 LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN-------------- 196
+ E + K D W +++ Y + G F D+ K+ + M + + N
Sbjct: 203 VFEGILCK-DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261
Query: 197 -------------------------SMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVS 231
+L YTQ G M A F +M + +VV W+ M++
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 232 GFVNSGDLSSARQLFEK------IPNPNAVSWVTMLCGFAR--------HGKITEARRLF 277
F +G + A LF + +PN +S + C + HG + + F
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG--F 379
Query: 278 DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEARE 337
D ++ NA+I YA+ ++D AVKLF ++ K+ VSW T+I GY +G+ +A
Sbjct: 380 D----LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 338 VY-----NQMP----------------------------------CKDIAAETALMSGLI 358
++ NQ+ K +A +L+
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 359 QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNT 414
+ G + A +FN++ T D WN++I+G+ G +AL + M K N +++
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 415 MISGYAQAGQMDSAENIFQAM 435
++SG + AG +D + F++M
Sbjct: 556 VLSGCSNAGLIDQGQECFESM 576
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 189/418 (45%), Gaps = 53/418 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
+LG + +A +VF+ ++V ++ MI+ F +NG ++A LF +M + +V ++
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAV 167
L+ + + S G E+ L+ V LD NA+
Sbjct: 354 ILNGCAIGKCS------------------------GLGEQLHGLVVKVGFDLDIYVSNAL 389
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN 227
I YAK + A K+F + K+ VS+N+++ GY G+ G A F + A +N VS
Sbjct: 390 IDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE-ALRNQVSVT 448
Query: 228 -------LMVSGFVNSGDLS-SARQLFEKIPNPNAVSWVTMLCG-FARHGKITEARRLFD 278
L + S DL L K N V+ L +A+ G I A+ +F+
Sbjct: 449 EVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFN 508
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD----GVSWTTIINGYIRVGKLDE 334
M +V SWNA+I+ Y+ +A+++ M +D G+++ +++G G +D+
Sbjct: 509 EMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQ 568
Query: 335 AREVYNQM-------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-CWNSMIA 386
+E + M PC + T ++ L ++G++D+A K+ + ++ W +M++
Sbjct: 569 GQECFESMIRDHGIEPC--LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 387 GFCQSGRMD----EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+ A ++ + P K+ ++ + + YA A Q + +I ++M+E +
Sbjct: 627 ASMNQNNEEFARRSAEEILKINP-KDEATYVLVSNMYAGAKQWANVASIRKSMKEMGV 683
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/615 (27%), Positives = 309/615 (50%), Gaps = 55/615 (8%)
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
D + +++ Y G DA VF+ +P D + ML Y N + + ++ +
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 220 EKNVVSWNLMVSGFVNSG----DLSSARQL---FEKIPNPNAVSWVTMLCGFARHGKITE 272
+ +++ S + + DL + +++ K+P+ + V +L +A+ G+I
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKS 194
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV----SWTTIINGYIR 328
A ++F+ + +NVV W +MIA Y ++ +E + LF +M + + ++ T+I +
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTK 254
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGL----IQTGRVDEASKMFNQLSTRDTICWNSM 384
+ L + + + + I + L++ L ++ G + A ++FN+ S D + W +M
Sbjct: 255 LSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAM 314
Query: 385 IAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISG---------------------- 418
I G+ +G ++EAL LF++M K N V+ +++SG
Sbjct: 315 IVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI 374
Query: 419 ------------YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
YA+ Q A+ +F+ E++IV+WNS+I+GF QN +AL M
Sbjct: 375 WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI--NDLFVSNALIAMYAKCG 524
E P+ T VG+ LH Y +K G++ + + V AL+ YAKCG
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Query: 525 RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
+SA +F IE + I+W+++I GY G I + + F++ML ++ P++ TF +LS
Sbjct: 495 DPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILS 554
Query: 585 ACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANA 644
AC H G+ N+G F M +D+ P +HY+C+VD+L R G LE+A +++ M ++ +
Sbjct: 555 ACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
Query: 645 GLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLM 704
+G+ L C +H ++GE ++ +L P +AS Y+ +SN++A GRW + + +R LM
Sbjct: 615 RCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLM 674
Query: 705 RDKRAGKLPGCSWIE 719
+ + K+ G S +E
Sbjct: 675 KQRGLSKIAGHSTME 689
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/577 (22%), Positives = 251/577 (43%), Gaps = 68/577 (11%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----D 128
++S++ G DAR +FD++ + + W M+ Y N E KL+D++ + D
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYD 141
Query: 129 NFSWALMITCYTRKGKLEKAREL---LELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFN 185
+ ++ + T L+ +++ L VP D ++ YAK G+ A KVFN
Sbjct: 142 DIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFN 200
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS-GDLSSARQ 244
+ ++++V + SM+AGY +N L F +M E NV+ + + LS+ Q
Sbjct: 201 DITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQ 260
Query: 245 -------LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
L + ++ ++L + + G I+ ARR+F+ ++V W AMI Y
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTH 320
Query: 298 DLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYN---QMPCKDIAAE 350
+ ++EA+ LF KM + V+ ++++G + L+ R V+ ++ D
Sbjct: 321 NGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA 380
Query: 351 TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK--- 407
AL+ + + +A +F S +D + WNS+I+GF Q+G + EAL LF +M +
Sbjct: 381 NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVT 440
Query: 408 -NSVSWNTMISG-------------------------------------YAQAGQMDSAE 429
N V+ ++ S YA+ G SA
Sbjct: 441 PNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSAR 500
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
IF +EE+N ++W+++I G+ + +L+ M ++ +KP++STF
Sbjct: 501 LIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTG 560
Query: 490 XXQVGNQLHEYILKS-GYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSL 547
G + + K + ++ M A+ G +E A + + D+ + +
Sbjct: 561 MVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAF 620
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
+ G ++ K+ML ++ PD ++ ++S
Sbjct: 621 LHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVS 655
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 198/398 (49%), Gaps = 32/398 (8%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
V ++ ++AK G+I A ++F+ ++ RN+V W +MIAGY+ N + EE LF+ M E
Sbjct: 177 VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN 236
Query: 128 ----DNFSWALMITCYTRKGKLEKAR---ELLELVPDKLDTACWNAVIAGYAKKGQFSDA 180
+ +++ +I T+ L + + L +L + +++ Y K G S+A
Sbjct: 237 NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA 296
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNS 236
+VFN DLV + +M+ GYT NG + AL F+KM + N V+ ++SG
Sbjct: 297 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLI 356
Query: 237 GDLSSARQLFE-----KIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAM 291
+L R + I + N + + + +A+ + +A+ +F+ K++V+WN++
Sbjct: 357 ENLELGRSVHGLSIKVGIWDTNVANALVHM--YAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 292 IAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQ------ 341
I+ ++Q+ I EA+ LF +M + +GV+ ++ + +G L ++
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ + TAL+ + G A +F+ + ++TI W++MI G+ + G +L+LF
Sbjct: 475 LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELF 534
Query: 402 RQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM 435
+M KK N ++ +++S G ++ + F +M
Sbjct: 535 EEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 189/419 (45%), Gaps = 54/419 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G + A RVF+ H +LV + +MI + NG +++A LF KM + IA
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 108 YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL--LELVPDKLDTACWN 165
L + E LE R + L + DT N
Sbjct: 349 VLSGCGLIE---------------------------NLELGRSVHGLSIKVGIWDTNVAN 381
Query: 166 AVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS 225
A++ YAK Q DA+ VF + KD+V++NS+++G++QNG + AL F +M ++V
Sbjct: 382 ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP 441
Query: 226 WNLMVSGFVNS----GDLSSARQLFEK------IPNPNAVSWVTMLCGFARHGKITEARR 275
+ V+ ++ G L+ L + + + +L +A+ G AR
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGK 331
+FD++ KN ++W+AMI Y + +++LF +M K + ++T+I++ G
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGM 561
Query: 332 LDEAREVYNQMPCKD------IAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSM 384
++E ++ ++ M KD T ++ L + G +++A + ++ + D C+ +
Sbjct: 562 VNEGKKYFSSMY-KDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAF 620
Query: 385 IAGFCQSGRMDEALDLFRQM--PKKNSVSWNTMISG-YAQAGQMDSAENIFQAMEERNI 440
+ G R D + ++M + S+ ++S YA G+ + A+ + M++R +
Sbjct: 621 LHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGL 679
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 86/210 (40%), Gaps = 12/210 (5%)
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGN-----QLHEYILK 503
GF + F +K L+L ++ D S+ + N Q H +
Sbjct: 14 GFPPRCVSFTTIKELILT----EENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTG 69
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKA 563
+G + D+ ++ L+++Y G + A VF I D W ++ Y LN ++E K
Sbjct: 70 NGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKL 129
Query: 564 FKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
+ ++ D + F L AC+ + G + +V+ + + + + L+D+
Sbjct: 130 YDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVV--LTGLLDMYA 187
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+ G ++ A V + ++ N W S++
Sbjct: 188 KCGEIKSAHKVFNDITLR-NVVCWTSMIAG 216
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/589 (30%), Positives = 302/589 (51%), Gaps = 44/589 (7%)
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMV 230
G S A K+F +P D+V +N+M+ G+++ G + + M ++ V ++ ++
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 231 SGFV-NSGDLSSARQLFEKIPN---------PNAVSWVTMLCGFARHGKITEARRLFDSM 280
+G + G L+ ++L + NA+ + LCG + AR +FD
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL-----MDMARGVFDRR 196
Query: 281 PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYN 340
++V SWN MI+ Y + + +E+++L ++M ++ VS T++ + L +V +
Sbjct: 197 CKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLV----LSACSKVKD 251
Query: 341 QMPCKDIAAETALMSGLIQTGRVDE-ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD 399
+ CK RV E S+ + S R N+++ + G MD A+
Sbjct: 252 KDLCK----------------RVHEYVSECKTEPSLRLE---NALVNAYAACGEMDIAVR 292
Query: 400 LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDA 459
+FR M ++ +SW +++ GY + G + A F M R+ +SW +I G+L+ + ++
Sbjct: 293 IFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNES 352
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
L+ M G PD+ T ++G + YI K+ ND+ V NALI M
Sbjct: 353 LEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDM 412
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
Y KCG E A++VF ++ D +W +++ G A NG EA K F QM + PD +T+
Sbjct: 413 YFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITY 472
Query: 580 IGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+G+LSAC+H+G+ +Q F M D IEP HY C+VD+LGR G ++EA+ ++R M
Sbjct: 473 LGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP 532
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
+ N+ +WG+LLGA R+H + + E AA ++ ELEP N + Y L N++A RW+++
Sbjct: 533 MNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLRE 592
Query: 700 LRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAIS 748
+R + D K PG S IEV F++ D L+ E I + L ++
Sbjct: 593 VRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELA 641
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 195/429 (45%), Gaps = 36/429 (8%)
Query: 54 EAVRVFSNTIHKNLVTYNSMISVFAKNGKISDA------RQLFDKMSQ----RNLVSWNT 103
E VR++ N + K VT +S F NG D ++L + + NL N
Sbjct: 117 EGVRLYLNML-KEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNA 175
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC 163
++ Y +++ A +FD + D FSW LMI+ Y R + E++ ELL + L +
Sbjct: 176 LVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPT 235
Query: 164 WNAVIAGYAKKGQFSDA-------EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
++ + + D E V L N+++ Y G+M +A+ F
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
M ++V+SW +V G+V G+L AR F+++P + +SW M+ G+ R G E+ +
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 277 FDSMPCKNVVSWN-AMIA-----AYAQDLQIDEAVKLFIKMP--HKDGVSWTTIINGYIR 328
F M ++ M++ A+ L+I E +K +I D V +I+ Y +
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFK 415
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSM 384
G ++A++V++ M +D TA++ GL G+ EA K+F Q+ D I + +
Sbjct: 416 CGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 385 IAGFCQSGRMDEALDLFRQMPKKNS-----VSWNTMISGYAQAGQMDSAENIFQAME-ER 438
++ SG +D+A F +M + V + M+ +AG + A I + M
Sbjct: 476 LSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNP 535
Query: 439 NIVSWNSLI 447
N + W +L+
Sbjct: 536 NSIVWGALL 544
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 150/315 (47%), Gaps = 24/315 (7%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
G+++ AVR+F + ++++++ S++ + + G + AR FD+M R+ +SW MI GYL
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYL 344
Query: 110 HNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTA 162
E+ ++F M D F+ ++T G LE + + K D
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVV 404
Query: 163 CWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
NA+I Y K G A+KVF+ M +D ++ +M+ G NG+ A+ F +M + +
Sbjct: 405 VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMS 464
Query: 223 V----VSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEA 273
+ +++ ++S +SG + AR+ F K+ + P+ V + M+ R G + EA
Sbjct: 465 IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEA 524
Query: 274 RRLFDSMPC-KNVVSWNAMIAAYAQDLQIDE-----AVKLFIKMPHKDGVSWTTIINGYI 327
+ MP N + W A++ A L DE A K +++ +G + + N Y
Sbjct: 525 YEILRKMPMNPNSIVWGALLG--ASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYA 582
Query: 328 RVGKLDEAREVYNQM 342
+ + REV ++
Sbjct: 583 GCKRWKDLREVRRKI 597
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 283 bits (725), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 241/451 (53%), Gaps = 18/451 (3%)
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQ 372
VSWT+ IN R G+L EA + ++ M + AL+SG G S+
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSEALGD 93
Query: 373 L----------STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQA 422
L + ++I + + GR +A +F M KNSV+WNTMI GY ++
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
GQ+D+A +F M ER+++SW ++I GF++ +AL M G KPD
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
G +H Y+L + N++ VSN+LI +Y +CG VE A QVF +E ++
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
SWNS+I G+A NG A E+ F++M + PD VTF G L+ACSH GL +GL F+ M
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH-KNLE 661
D+ I P EHY CLVDL R GRLE+A +V+ M +K N + GSLL AC H N+
Sbjct: 334 KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIV 393
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
+ E L++L + SNY+ LSNM+A G+WE ++R M+ K PG S IE+
Sbjct: 394 LAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEID 453
Query: 722 NQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
+ + F++ D+ + I+ +L IS+ +R
Sbjct: 454 DCMHVFMAGDNAHVETTYIREVLELISSDLR 484
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 18/260 (6%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS 131
++I +++K G+ AR +FD M +N V+WNTMI GY+ + V+ A+K+FD MPERD S
Sbjct: 114 AIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLIS 173
Query: 132 WALMITCYTRKGKLEKA----RELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM 187
W MI + +KG E+A RE +++ K D A + G S V +
Sbjct: 174 WTAMINGFVKKGYQEEALLWFRE-MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYV 232
Query: 188 PVKDLVS----YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD----L 239
+D + NS++ Y + G + A F M ++ VVSWN ++ GF +G+ L
Sbjct: 233 LSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESL 292
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-----WNAMIAA 294
R++ EK P+AV++ L + G + E R F M C +S + ++
Sbjct: 293 VYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDL 352
Query: 295 YAQDLQIDEAVKLFIKMPHK 314
Y++ ++++A+KL MP K
Sbjct: 353 YSRAGRLEDALKLVQSMPMK 372
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 178/425 (41%), Gaps = 99/425 (23%)
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
VS+ S + T+NG++ A F M E N +++ ++SG GD +S +
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSEALGD 93
Query: 249 IP---------NPNAVSWVTMLCG-FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQD 298
+ + N V T + G +++ G+ +AR +FD M KN V+WN MI Y +
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 299 LQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALM 354
Q+D A K+F KMP +D +SWT +ING+++ G +EA + +M D A A +
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 355 SGLIQTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEALDLFRQMPKKNSV 410
+ G + + + ++D NS+I +C+ G ++ A +F M K+ V
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
SWN++I G+A G + F+ M+E+ G
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEK-------------------------------G 302
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAE 530
KPD TF + AL A + G VE
Sbjct: 303 FKPDAVTF----------------------------------TGALTAC-SHVGLVEEGL 327
Query: 531 QVFTAIECVDLIS-----WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+ F ++C IS + L+ Y+ G +A K + M + P++V +L+A
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSLLAA 384
Query: 586 CSHAG 590
CS+ G
Sbjct: 385 CSNHG 389
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 150/331 (45%), Gaps = 35/331 (10%)
Query: 46 LGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ------ 95
L + G++ EA + FS+ + N +T+ I++ + G + + +
Sbjct: 46 LTRNGRLAEAAKEFSDMTLAGVEPNHITF---IALLSGCGDFTSGSEALGDLLHGYACKL 102
Query: 96 ---RNLVSWNTMIAG-YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL 151
RN V T I G Y ++A +FD M ++++ +W MI Y R G+++ A ++
Sbjct: 103 GLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKM 162
Query: 152 LELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGK 207
+ +P++ D W A+I G+ KKG +A F M + D V+ + L T G
Sbjct: 163 FDKMPER-DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGA 221
Query: 208 MGLAL----HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG 263
+ L + + + NV N ++ + G + ARQ+F + VSW +++ G
Sbjct: 222 LSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVG 281
Query: 264 FARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS- 318
FA +G E+ F M K + V++ + A + ++E ++ F M +S
Sbjct: 282 FAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISP 341
Query: 319 ----WTTIINGYIRVGKLDEAREVYNQMPCK 345
+ +++ Y R G+L++A ++ MP K
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V S N+ NS+I ++ + G + ARQ+F M +R +VSWN++I G+ N E+
Sbjct: 232 VLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHES 291
Query: 118 SKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC------WNAV 167
F M E+ D ++ +T + G +E+ +++ K D + +
Sbjct: 292 LVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM--KCDYRISPRIEHYGCL 349
Query: 168 IAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNG-KMGLALHFFEKMAEKNVVS 225
+ Y++ G+ DA K+ MP+K + V S+LA + +G + LA + + + NV S
Sbjct: 350 VDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKS 409
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 129/312 (41%), Gaps = 25/312 (8%)
Query: 23 KHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGK 82
K +L + K+ N I + G+V+ A ++F ++L+++ +MI+ F K G
Sbjct: 127 KARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGY 186
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWAL-------- 134
+A F +M + I L N+ + F + R S
Sbjct: 187 QEEALLWFREMQISGVKPDYVAIIAAL-NACTNLGALSFGLWVHRYVLSQDFKNNVRVSN 245
Query: 135 -MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK--- 190
+I Y R G +E AR++ + +K WN+VI G+A G ++ F M K
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNM-EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK 304
Query: 191 -DLVSYNSMLAGYTQNGKMGLALHFFEKMA-----EKNVVSWNLMVSGFVNSGDLSSARQ 244
D V++ L + G + L +F+ M + + +V + +G L A +
Sbjct: 305 PDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Query: 245 LFEKIP-NPNAVSWVTMLCGFARHG-KITEARRLFDSMPCKNVVSWNAMIA---AYAQDL 299
L + +P PN V ++L + HG I A RL + NV S + + YA D
Sbjct: 365 LVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADG 424
Query: 300 QIDEAVKLFIKM 311
+ + A K+ KM
Sbjct: 425 KWEGASKMRRKM 436
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/672 (28%), Positives = 305/672 (45%), Gaps = 137/672 (20%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N ++ +K G+ +A ++F+ MP +D ++N+M+ Y+ + ++ A F KN +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKI------PNPNAVSWVTMLC--------GFARHGKI 270
SWN ++SG+ SG A LF ++ PN + V +C G HG
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 271 TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP-HKDGVSWTTIINGYIRV 329
+ D NVV N ++A YAQ +I EA LF M K+ V+WT+++ GY +
Sbjct: 152 IKTGFDLDV----NVV--NGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 330 GKLDEAREVYNQM-----------------PCKDIAA----------------------E 350
G +A E + + C ++A +
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ 265
Query: 351 TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN-- 408
+AL+ + ++ A + + D + WNSMI G + G + EAL +F +M +++
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 409 --------------------------------------SVSWNTMISGYAQAGQMDSAEN 430
+ N ++ YA+ G MDSA
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
+F+ M E++++SW +L+TG N Y +ALK M G PD+
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISG 550
+ G Q+H +KSG+ + L V+N+L+ MY KCG +E A +F ++E DLI+W LI G
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVG 505
Query: 551 YALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEP 610
YA NG +A + F M + + I P
Sbjct: 506 YAKNGLLEDAQRYFDSMRTV-----------------------------------YGITP 530
Query: 611 LAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRL 670
EHY+C++DL GR G + ++ M+V+ +A +W ++L A R H N+E GE AA L
Sbjct: 531 GPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 671 SELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSD 730
ELEP+NA Y+ LSNM++ AGR +E +R LM+ + K PGCSW+E + ++ F+S+
Sbjct: 591 MELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSE 650
Query: 731 DSGRLRPETIQI 742
D R P ++I
Sbjct: 651 D--RRHPRMVEI 660
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 231/517 (44%), Gaps = 113/517 (21%)
Query: 56 VRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN 111
++ F + IH + + N ++ +K+G++ +ARQ+FDKM +R+ +WNTMI Y ++
Sbjct: 13 LKPFGSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNS 72
Query: 112 SMVEEASKLFDVMPERDNFSWALMITCYTRKG-KLEKARELLELVPD------------- 157
+ +A KLF P ++ SW +I+ Y + G K+E E+ D
Sbjct: 73 RRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVL 132
Query: 158 ------------------------KLDTACWNAVIAGYAKKGQFSDAEKVFNLMP-VKDL 192
LD N ++A YA+ + S+AE +F M K+
Sbjct: 133 RMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNN 192
Query: 193 VSYNSMLAGYTQNG-------------------------------------KMGLALH-- 213
V++ SML GY+QNG ++G+ +H
Sbjct: 193 VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCC 252
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEA 273
+ + N+ + ++ + ++ SAR L E + + VSW +M+ G R G I EA
Sbjct: 253 IVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEA 312
Query: 274 RRLFDSMPCKNV----VSWNAMIAAYA---QDLQIDEAVKLFIKMPHKDGVSWTTIING- 325
+F M +++ + +++ +A +++I + I K G + ++N
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIV---KTGYATYKLVNNA 369
Query: 326 ----YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS----TRD 377
Y + G +D A +V+ M KD+ + TAL++G G DEA K+F + T D
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429
Query: 378 TICWNSMIAG-----FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIF 432
I S+++ + G+ + P SV+ N++++ Y + G ++ A IF
Sbjct: 430 KIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVN-NSLVTMYTKCGSLEDANVIF 488
Query: 433 QAMEERNIVSWNSLITGFLQNSL------YFDALKSL 463
+ME R++++W LI G+ +N L YFD+++++
Sbjct: 489 NSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTV 525
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 27/187 (14%)
Query: 59 FSNTIHKN---------LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
F +H N L NS+++++ K G + DA +F+ M R+L++W +I GY
Sbjct: 448 FGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA 507
Query: 110 HNSMVEEASKLFDVM---------PERDNFSWALMITCYTRKGKLEKARELLELVPDKLD 160
N ++E+A + FD M PE +A MI + R G K +LL + + D
Sbjct: 508 KNGLLEDAQRYFDSMRTVYGITPGPEH----YACMIDLFGRSGDFVKVEQLLHQMEVEPD 563
Query: 161 TACWNAVIAGYAKKGQFSDAEK----VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
W A++A K G + E+ + L P + V Y + Y+ G+ A +
Sbjct: 564 ATVWKAILAASRKHGNIENGERAAKTLMELEP-NNAVPYVQLSNMYSAAGRQDEAANVRR 622
Query: 217 KMAEKNV 223
M +N+
Sbjct: 623 LMKSRNI 629
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 130/344 (37%), Gaps = 64/344 (18%)
Query: 16 KIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMIS 75
++K+ S H L + + + N + K G ++ A++VF I K+++++ ++++
Sbjct: 344 EMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVT 403
Query: 76 VFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNS---MVEEASKLFDVMPERDNFSW 132
NG +A +LF M + + A L S + E + + F
Sbjct: 404 GNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPS 463
Query: 133 AL-----MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM 187
+L ++T YT+ G LE A + + + D W +I GYAK G DA++ F+ M
Sbjct: 464 SLSVNNSLVTMYTKCGSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
+ G T + + M+ F SGD QL
Sbjct: 523 ---------RTVYGITPGPE-----------------HYACMIDLFGRSGDFVKVEQLLH 556
Query: 248 KIP-NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
++ P+A W +L +HG I R A K
Sbjct: 557 QMEVEPDATVWKAILAASRKHGNIENGER----------------------------AAK 588
Query: 307 LFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
+++ + V + + N Y G+ DEA V M ++I+ E
Sbjct: 589 TLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKE 632
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 270/524 (51%), Gaps = 47/524 (8%)
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGK 331
LF N+ +N++I + + E + LF+ + + G ++ ++ R
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 332 LDEAREVYNQM-PC---KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
++++ + C D+AA T+L+S +GR+++A K+F+++ R + W ++ +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 388 FCQSGRMDEALDLFRQMP---------------------------------------KKN 408
+ SGR EA+DLF++M +KN
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
S T+++ YA+ G+M+ A ++F +M E++IV+W+++I G+ NS + ++ + M +
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
E KPDQ + +G I + ++ +LF++NALI MYAKCG +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 529 AEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
+VF ++ D++ N+ ISG A NG+ +F F Q + PD TF+G+L C H
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
AGL GL F + +A++ EHY C+VDL GR G L++A+ ++ M ++ NA +WG
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 649 SLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKR 708
+LL CR+ K+ ++ E L LEP NA NY+ LSN+++ GRW+E +R +M K
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKG 546
Query: 709 AGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
K+PG SWIE++ ++ FL+DD + I L + MR
Sbjct: 547 MKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Score = 129 bits (324), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 209/460 (45%), Gaps = 68/460 (14%)
Query: 56 VRVFSNTIHKNLVTYNSMI--SVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSM 113
V + ++ +H + N ++ ++F + K S LF N+ +N++I G+++N +
Sbjct: 34 VSLINHHLHHDTFLVNLLLKRTLFFRQTKYS--YLLFSHTQFPNIFLYNSLINGFVNNHL 91
Query: 114 VEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNA 166
E LF + + F++ L++ TR + +L LV D A +
Sbjct: 92 FHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTS 151
Query: 167 VIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSW 226
+++ Y+ G+ +DA K+F+ +P + +V++ ++ +GYT +G+ A+ F+KM E V
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211
Query: 227 NLMV----SGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFD 278
+ + S V+ GDL S + + + N+ T++ +A+ GK+ +AR +FD
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD----------------------- 315
SM K++V+W+ MI YA + E ++LF++M ++
Sbjct: 272 SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDL 331
Query: 316 ---GVSW-------------TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ 359
G+S +I+ Y + G + EV+ +M KDI A +SGL +
Sbjct: 332 GEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAK 391
Query: 360 TGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMP-----KKNSV 410
G V + +F Q + D + ++ G +G + + L F + K+
Sbjct: 392 NGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVE 451
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEER-NIVSWNSLITG 449
+ M+ + +AG +D A + M R N + W +L++G
Sbjct: 452 HYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 154/320 (48%), Gaps = 21/320 (6%)
Query: 44 IHLGKLGKVEEAVRVFSNT-IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
+H+G L E V+ + KN ++++++AK GK+ AR +FD M ++++V+W+
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWS 282
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK 158
TMI GY NS +E +LF M + D FS ++ G L+ + L+
Sbjct: 283 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH 342
Query: 159 ---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
+ NA+I YAK G + +VF M KD+V N+ ++G +NG + L+ F
Sbjct: 343 EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF 402
Query: 216 ---EKMAEKNVVSWNL-MVSGFVNSGDLSSARQLFEKIPNPNAVS-----WVTMLCGFAR 266
EK+ S L ++ G V++G + + F I A+ + M+ + R
Sbjct: 403 GQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGR 462
Query: 267 HGKITEARRLFDSMPCK-NVVSWNAMIAA--YAQDLQIDEAV-KLFIKMPHKDGVSWTTI 322
G + +A RL MP + N + W A+++ +D Q+ E V K I + + ++ +
Sbjct: 463 AGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQL 522
Query: 323 INGYIRVGKLDEAREVYNQM 342
N Y G+ DEA EV + M
Sbjct: 523 SNIYSVGGRWDEAAEVRDMM 542
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 273/516 (52%), Gaps = 15/516 (2%)
Query: 246 FEKIPNPNAVSWVTMLC-GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
F +P AVS V+ L G HG + L D + YA +I+ A
Sbjct: 112 FSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPF------VETGFMDMYASCGRINYA 165
Query: 305 VKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QT 360
+F +M H+D V+W T+I Y R G +DEA +++ +M ++ + ++ ++ +T
Sbjct: 166 RNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRT 225
Query: 361 GRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
G + ++ L D T +++ + +G MD A + FR+M +N M+
Sbjct: 226 GNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMV 285
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
SGY++ G++D A+ IF E++++V W ++I+ ++++ +AL+ M G KPD
Sbjct: 286 SGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVV 345
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
+ +H I +G ++L ++NALI MYAKCG +++ VF +
Sbjct: 346 SMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM 405
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
+++SW+S+I+ +++G A +A F +M E V P++VTF+G+L CSH+GL +G
Sbjct: 406 PRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGK 465
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+F M +++ I P EHY C+VDL GR L EA V+ M V +N +WGSL+ ACR+
Sbjct: 466 KIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRI 525
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
H LE+G+FAA R+ ELEP + + +SN++A RWE+V +R +M +K K G S
Sbjct: 526 HGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
Query: 717 WIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
I+ + FL D + I L+ + + ++
Sbjct: 586 RIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLK 621
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 194/380 (51%), Gaps = 29/380 (7%)
Query: 74 ISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD------VMPER 127
+ ++A G+I+ AR +FD+MS R++V+WNTMI Y +V+EA KLF+ VMP
Sbjct: 153 MDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP-- 210
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVF 184
D +++ R G + R + E + + ++DT A++ YA G A + F
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQ 244
M V++L +M++GY++ G++ A F++ +K++V W M+S +V S A +
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 245 LFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW----NAMIAAYA 296
+FE++ P+ VS +++ A G + +A+ + + + S NA+I YA
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 297 QDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSG 356
+ +D +F KMP ++ VSW+++IN G+ +A ++ +M +++ G
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 357 LI----QTGRVDEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQMP-K 406
++ +G V+E K+F ++ I + M+ F ++ + EAL++ MP
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 407 KNSVSWNTMISGYAQAGQMD 426
N V W +++S G+++
Sbjct: 511 SNVVIWGSLMSACRIHGELE 530
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 196/396 (49%), Gaps = 38/396 (9%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
G ++ A F +NL +M+S ++K G++ DA+ +FD+ +++LV W TMI+ Y+
Sbjct: 261 GCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 110 HNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAR---ELLELVPDKLDTA 162
+ +EA ++F+ M + D S +I+ G L+KA+ + + + + +
Sbjct: 321 ESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELS 380
Query: 163 CWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
NA+I YAK G VF MP +++VS++SM+ + +G+ AL F +M ++N
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN 440
Query: 223 V----VSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEA 273
V V++ ++ G +SG + +++F + + P + M+ F R + EA
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREA 500
Query: 274 RRLFDSMP-CKNVVSWNAMIAA--YAQDLQIDE-AVKLFIKM-PHKDGVSWTTIINGYIR 328
+ +SMP NVV W ++++A +L++ + A K +++ P DG + + N Y R
Sbjct: 501 LEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDG-ALVLMSNIYAR 559
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV------DEASKMFNQLSTR-DTICW 381
+ ++ R + M K++ E L S + Q G+ D+ K N++ + D +
Sbjct: 560 EQRWEDVRNIRRVMEEKNVFKEKGL-SRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
Query: 382 NSMIAGF---CQSGRMDEALDLFRQMPKKNSVSWNT 414
+AG+ C S +D + KK+ V W++
Sbjct: 619 KLKLAGYVPDCGSVLVD-----VEEEEKKDLVLWHS 649
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 190/415 (45%), Gaps = 30/415 (7%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ N + + ++++++A G + AR+ F KMS RNL M++GY +++A
Sbjct: 238 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 297
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKK 174
+FD ++D W MI+ Y ++A + E + K D +VI+ A
Sbjct: 298 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANL 357
Query: 175 GQFSDAEKVFNLMPVKDLVSY----NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
G A+ V + + V L S N+++ Y + G + FEKM +NVVSW+ M+
Sbjct: 358 GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMI 417
Query: 231 SGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
+ G+ S A LF ++ PN V++V +L G + G + E +++F SM + +
Sbjct: 418 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI 477
Query: 287 S-----WNAMIAAYAQDLQIDEAVKLFIKMP-HKDGVSWTTI-----INGYIRVGKLDEA 335
+ + M+ + + + EA+++ MP + V W ++ I+G + +GK A
Sbjct: 478 TPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKF-AA 536
Query: 336 REVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMD 395
+ + P D A LMS + + E + ++ + ++ Q+G+
Sbjct: 537 KRILELEPDHDGA--LVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSH 594
Query: 396 EALDLFRQMPKKNSV--SWNTMISGYAQAGQMDSAENIFQAMEE---RNIVSWNS 445
E L ++ + N + + ++S AG + ++ +EE +++V W+S
Sbjct: 595 EFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHS 649
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 40 NQQIIHL-GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
N +I++ K G ++ VF +N+V+++SMI+ + +G+ SDA LF +M Q N+
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 99 ----VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKAR 149
V++ ++ G H+ +VEE K+F M + N + + M+ + R L +A
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 150 ELLELVPDKLDTACWNAV-----IAGYAKKGQFSDAEKVFNLMPVKD 191
E++E +P + W ++ I G + G+F+ A+++ L P D
Sbjct: 502 EVIESMPVASNVVIWGSLMSACRIHGELELGKFA-AKRILELEPDHD 547
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 181/604 (29%), Positives = 312/604 (51%), Gaps = 46/604 (7%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSD--------------- 179
++ Y +KG + A+ L + +P++ DT WNA+I GY++ G D
Sbjct: 91 LLNLYLKKGCVTSAQMLFDEMPER-DTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSP 149
Query: 180 -AEKVFNLMPVKDLVSYNSMLAGYTQNG---KMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
A + NL+P + S G + +G K GL L K N ++S +
Sbjct: 150 SATTLVNLLPFCGQCGFVSQ--GRSVHGVAAKSGLELDSQVK---------NALISFYSK 198
Query: 236 SGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV-VSWNAMIAA 294
+L SA LF ++ + + VSW TM+ +++ G EA +F +M KNV +S +I
Sbjct: 199 CAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINL 258
Query: 295 YAQDLQIDEAVKLFIKMPHKDGVSW-TTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
+ + + L +K + +S T+++ Y R G L A +Y I T++
Sbjct: 259 LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 354 MSGLIQTGRVDEASKMFN---QLSTR-DTICWNSMIAGFCQSGRMDEALDLFRQMPKKN- 408
+S + G +D A F+ QL + D + ++ G +S +D + L K
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL 378
Query: 409 ---SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN---SLYFDALKS 462
++ N +I+ Y++ +++ +F+ ++E ++SWNS+I+G +Q+ S F+
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQ 438
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAK 522
++L G G PD T +G +LH Y L++ + N+ FV ALI MYAK
Sbjct: 439 MMLTG--GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAK 496
Query: 523 CGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
CG AE VF +I+ +WNS+ISGY+L+G A + +M + + PD++TF+G+
Sbjct: 497 CGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGV 556
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
LSAC+H G ++G F+ M+++F I P +HY+ +V LLGR EA ++ MD+K
Sbjct: 557 LSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKP 616
Query: 643 NAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRV 702
++ +WG+LL AC +H+ LE+GE+ A ++ L+ N Y+ +SN++A W++V R+R
Sbjct: 617 DSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRN 676
Query: 703 LMRD 706
+M+D
Sbjct: 677 MMKD 680
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 222/470 (47%), Gaps = 67/470 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
S+++++ K G ++ A+ LFD+M +R+ V WN +I GY N +A KLF VM ++ F
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ-GF 147
Query: 131 SWA------LMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAE 181
S + L+ C + G + + R + + +LD+ NA+I+ Y+K + AE
Sbjct: 148 SPSATTLVNLLPFC-GQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAE 206
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSG 237
+F M K VS+N+M+ Y+Q+G A+ F+ M EKNV V+ ++S V+
Sbjct: 207 VLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHE 266
Query: 238 DLSSARQLFEKIPNPNAVSWVT-MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
L L K N +S VT ++C ++R G + A RL+ S ++V ++++ YA
Sbjct: 267 PLHC---LVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYA 323
Query: 297 QDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
+ +D AV F K D V+ I++G + +D ++ + +T
Sbjct: 324 EKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTL 383
Query: 353 LMSGLIQT-GRVDEASK---MFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM---- 404
+++GLI + D+ +F QL I WNS+I+G QSGR A ++F QM
Sbjct: 384 VVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTG 443
Query: 405 ---PKKNSVS---------------------------------WNTMISGYAQAGQMDSA 428
P +++ +I YA+ G A
Sbjct: 444 GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQA 503
Query: 429 ENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
E++F++++ +WNS+I+G+ + L AL + M +G KPD+ TF
Sbjct: 504 ESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITF 553
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 7/212 (3%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
++++ Y + G + SA+ +F M ER+ V WN+LI G+ +N DA K ++M ++G
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P +T G +H KSG D V NALI+ Y+KC + SAE +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F ++ +SWN++I Y+ +G EA FK M + V VT I +LSA H
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA--HVSHE 266
Query: 593 NQGLDLFKC-MVEDFA-IEPLAEHYS---CLV 619
+ KC MV D + + L YS CLV
Sbjct: 267 PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 137/291 (47%), Gaps = 22/291 (7%)
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF-----NQLS 374
T+++N Y++ G + A+ ++++MP +D AL+ G + G +A K+F S
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 375 TRDTICWNSMI----AGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAEN 430
T N + GF GR + + + V N +IS Y++ ++ SAE
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK-NALISFYSKCAELGSAEV 207
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
+F+ M++++ VSWN++I + Q+ L +A+ M + + T
Sbjct: 208 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH-- 265
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISG 550
LH ++K G +ND+ V +L+ Y++CG + SAE+++ + + ++ S++S
Sbjct: 266 ----EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSC 321
Query: 551 YALNG---YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
YA G A+ F +Q+ + D V +G+L C + + G+ L
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMK---IDAVALVGILHGCKKSSHIDIGMSL 369
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNG 555
Q+ ++ KSG ++V +L+ +Y K G V SA+ +F + D + WN+LI GY+ NG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHY 615
Y +A+K F ML + P T + +L C G +QG + + +E ++
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS-GLELDSQVK 189
Query: 616 SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+ L+ + L A + R M K+ W +++GA
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGA 226
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 266/484 (54%), Gaps = 10/484 (2%)
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-------PCKNVVSWNAMIAAYAQ 297
+FE++P+P W ++ G++ E + M P + + +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 298 DLQIDEAVK-LFIKMP-HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
+++ +V L +++ KD V T+ ++ Y + L AR+V+ +MP ++ + TAL+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTM 415
+++G ++EA MF+ + R+ WN+++ G +SG + A LF +MPK++ +S+ +M
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
I GYA+ G M SA ++F+ ++ +W++LI G+ QN +A K M + KPD+
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYI-LKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
++ ++ Y+ + + +V ALI M AKCG ++ A ++F
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ DL+S+ S++ G A++G EA + F++M+ E +VPD+V F +L C + L +
Sbjct: 365 EMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEE 424
Query: 595 GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
GL F+ M + ++I +HYSC+V+LL R G+L+EA+ +++ M +A+A WGSLLG C
Sbjct: 425 GLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGC 484
Query: 655 RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
+H N EI E A L ELEP +A +Y+ LSN++A RW +V LR M + K+ G
Sbjct: 485 SLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICG 544
Query: 715 CSWI 718
SWI
Sbjct: 545 RSWI 548
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 174/348 (50%), Gaps = 19/348 (5%)
Query: 14 NHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSM 73
N ++++ S H L + K V + GK + A +VF +N V++ ++
Sbjct: 123 NGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTAL 182
Query: 74 ISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWA 133
+ + K+G++ +A+ +FD M +RNL SWN ++ G + + + A KLFD MP+RD S+
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYT 242
Query: 134 LMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
MI Y + G + AR+L E +D W+A+I GYA+ GQ ++A KVF+ M K++
Sbjct: 243 SMIDGYAKGGDMVSARDLFEEA-RGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKM-----AEKNVVSWNLMVSGFVN----SGDLSSARQ 244
++ G EK+ N S + +V ++ G + A +
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQ 300
LFE++P + VS+ +M+ G A HG +EA RLF+ M + + V++ ++ Q
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 301 IDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQMP 343
++E ++ F M K + ++ I+N R GKL EA E+ MP
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 215/427 (50%), Gaps = 25/427 (5%)
Query: 151 LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM-----PVKDLVSYNSMLAGYTQN 205
+ E VP T WN +I GY+ K F + + M D ++ ++ + N
Sbjct: 65 VFERVPSP-GTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNN 123
Query: 206 G--KMGLALH--FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
G ++G ++H +K+VV V + DL SAR++F ++P NAVSW ++
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTT 321
+ + G++ EA+ +FD MP +N+ SWNA++ + + A KLF +MP +D +S+T+
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS 243
Query: 322 IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----D 377
+I+GY + G + AR+++ + D+ A +AL+ G Q G+ +EA K+F+++ + D
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPD 303
Query: 378 TICWNSMIAGFCQSG--RMDEALD--LFRQMPKKNS-VSWNTMISGYAQAGQMDSAENIF 432
+++ Q G + E +D L ++M K +S +I A+ G MD A +F
Sbjct: 304 EFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLF 363
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ 492
+ M +R++VS+ S++ G + +A++ M EG PD+ F +
Sbjct: 364 EEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVE 423
Query: 493 VGNQLHEYILKSGYI---NDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLI 548
G + E + K I D + + ++ + ++ G+++ A ++ ++ +W SL+
Sbjct: 424 EGLRYFELMRKKYSILASPDHY--SCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 549 SGYALNG 555
G +L+G
Sbjct: 482 GGCSLHG 488
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 195/395 (49%), Gaps = 38/395 (9%)
Query: 89 LFDKMSQRNLVSWNTMIAGYLHNSM-VEEASKLFDVM----PERDNFSWALMITCYTRKG 143
+F+++ WN +I GY + + E S L +M D +++ L++ + G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 144 KLEKARELLELVP----DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
++ + LV DK D + + Y K A KVF MP ++ VS+ +++
Sbjct: 125 QVRVGSSVHGLVLRIGFDK-DVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVT 259
Y ++G++ A F+ M E+N+ SWN +V G V SGDL +A++LF+++P + +S+ +
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS 243
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSW 319
M+ G+A+ G + AR LF+ +V +W+A+I YAQ+ Q +EA K+F +M K+
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN---- 299
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDE-ASKMFNQLSTRDT 378
+ +I VG + +QM C ++ +VD + N+ S+
Sbjct: 300 -VKPDEFIMVGLMSAC----SQMGCFELCE------------KVDSYLHQRMNKFSSHYV 342
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+ ++I + G MD A LF +MP+++ VS+ +M+ G A G A +F+ M +
Sbjct: 343 V--PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE 400
Query: 439 NIVSWNSLITGFL----QNSLYFDALKSLVLMGRE 469
IV T L Q+ L + L+ LM ++
Sbjct: 401 GIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKK 435
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 185/647 (28%), Positives = 330/647 (51%), Gaps = 31/647 (4%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV-KDLV 193
++ Y++ G L +AR + + + ++ + WNAVIA Y K +A ++F +DL+
Sbjct: 29 LVNLYSKSGLLREARNVFDEMLER-NVYSWNAVIAAYVKFNNVKEARELFESDNCERDLI 87
Query: 194 SYNSMLAGYTQ-NGKMGLALHFFEKMAEK-------NVVSWNLMVSGFVNSGDLSSARQL 245
+YN++L+G+ + +G A+ F +M K + + MV ++ QL
Sbjct: 88 TYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQL 147
Query: 246 ---FEKIPNPNAVSWVTMLCG-FARHGKITEARRLFDSMPCKNV--VSWNAMIAAYAQDL 299
K N V+ L +++ GK E +F+ + V V+ NAMIAAY ++
Sbjct: 148 HGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREG 207
Query: 300 QIDEAVKLFIKMPH-KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI-------AAET 351
ID+A+ +F + P D +SW T+I GY + G +EA ++ M + A
Sbjct: 208 DIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Query: 352 ALMSGL--IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
++S L ++ G+ + +++ S + + ++ +C+ G M A N
Sbjct: 268 NVLSSLKSLKIGK-EVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNL 326
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV--LMG 467
S ++MI GY+ G+M A+ +F ++ E+N+V W ++ G+L N D++ L +
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL-NLRQPDSVLELARAFIA 385
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
E PD + G ++H + L++G + D + A + MY+KCG VE
Sbjct: 386 NETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVE 445
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
AE++F + D + +N++I+G A +G+ ++F+ F+ M PD++TF+ +LSAC
Sbjct: 446 YAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACR 505
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD-VKANAGL 646
H GL +G FK M+E + I P HY+C++DL G+ RL++A ++ G+D V+ +A +
Sbjct: 506 HRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVI 565
Query: 647 WGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
G+ L AC +KN E+ + +L +E N S YI ++N +A +GRW+E++R+R MR
Sbjct: 566 LGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRG 625
Query: 707 KRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
K GCSW + Q F S D E I +L+ ++ + +
Sbjct: 626 KELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSE 672
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 181/378 (47%), Gaps = 78/378 (20%)
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-IKMP 312
AVS ++ +++ G + EAR +FD M +NV SWNA+IAAY + + EA +LF
Sbjct: 23 AVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNC 82
Query: 313 HKDGVSWTTIINGYIRV-GKLDEAREVYNQMPCK--------DIAAETAL---------- 353
+D +++ T+++G+ + G EA E++ +M K D T +
Sbjct: 83 ERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVF 142
Query: 354 --------------------MSGLI----QTGRVDEASKMFNQLSTR--DTICWNSMIAG 387
+S LI + G+ E +FN D++ N+MIA
Sbjct: 143 YGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAA 202
Query: 388 FCQSGRMDEALDLFRQMPKKN-SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
+C+ G +D+AL +F + P+ N ++SWNT+I+GYAQ G + A + +MEE N + W+
Sbjct: 203 YCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEE-NGLKWDEH 261
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
G + N L +LKSL ++G ++H +LK+G
Sbjct: 262 SFGAVLNVL--SSLKSL----------------------------KIGKEVHARVLKNGS 291
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
++ FVS+ ++ +Y KCG ++ AE +L S +S+I GY+ G +EA + F
Sbjct: 292 YSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDS 351
Query: 567 MLSEEVVPDQVTFIGMLS 584
+ + +V F+G L+
Sbjct: 352 LSEKNLVVWTAMFLGYLN 369
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 130/572 (22%), Positives = 260/572 (45%), Gaps = 46/572 (8%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
+ H +I S + NQ + K G + EA VF + +N+ ++N++I+ + K
Sbjct: 9 LHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFN 68
Query: 82 KISDARQLFDKMS-QRNLVSWNTMIAGYLHNSMVE-EASKLFDVMPER-------DNFSW 132
+ +AR+LF+ + +R+L+++NT+++G+ E EA ++F M + D+F+
Sbjct: 69 NVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTV 128
Query: 133 ALMITCYTRKGKL---EKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV 189
M+ + + E+ +L + +++I Y+K G+F + +FN V
Sbjct: 129 TTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCV 188
Query: 190 K--DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN-VVSWNLMVSGFVNSGDLSSARQLF 246
+ D V+ N+M+A Y + G + AL F + E N +SWN +++G+ +G A ++
Sbjct: 189 EFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMA 248
Query: 247 EKIPNPNAVSWVTMLCGFA----------RHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
+ N + W G + GK AR L + VS + ++ Y
Sbjct: 249 VSME-ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVS-SGIVDVYC 306
Query: 297 QDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSG 356
+ + A + + S +++I GY GK+ EA+ +++ + K++ TA+ G
Sbjct: 307 KCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLG 366
Query: 357 ---LIQTGRVDEASKMF--NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ-------M 404
L Q V E ++ F N+ +T D++ S++ M+ ++ M
Sbjct: 367 YLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILM 426
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
KK ++ M Y++ G ++ AE IF + ER+ V +N++I G + + +
Sbjct: 427 DKKLVTAFVDM---YSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE 483
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN-DLFVSNALIAMYAKC 523
M G KPD+ TF G + + ++++ I+ + +I +Y K
Sbjct: 484 DMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKA 543
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNG 555
R++ A ++ +E +D + +++I G LN
Sbjct: 544 YRLDKAIEL---MEGIDQVEKDAVILGAFLNA 572
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 41/254 (16%)
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ 433
ST + N ++ + +SG + EA ++F +M ++N SWN +I+ Y + + A +F+
Sbjct: 19 STLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFE 78
Query: 434 AME-ERNIVSWNSLITGFLQ-NSLYFDALKSLVLMGREGKKP---DQSTFXXXXXXXXXX 488
+ ER+++++N+L++GF + + +A++ M R+ K D T
Sbjct: 79 SDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKL 138
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV--------- 539
G QLH ++K+G F ++LI MY+KCG+ + +F CV
Sbjct: 139 TNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNG-SCVEFVDSVARN 197
Query: 540 --------------------------DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
D ISWN+LI+GYA NGY EA K M +
Sbjct: 198 AMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLK 257
Query: 574 PDQVTFIGMLSACS 587
D+ +F +L+ S
Sbjct: 258 WDEHSFGAVLNVLS 271
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 146/338 (43%), Gaps = 61/338 (18%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLH----NSMVEEASKLF 121
NL + +SMI ++ GK+ +A++LFD +S++NLV W M GYL+ +S++E A
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF- 383
Query: 122 DVMPERDNFSWALMIT--------CYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAK 173
+ E + +M++ Y GK L + +D A + Y+K
Sbjct: 384 -IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGIL--MDKKLVTAFVDMYSK 440
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGF 233
G AE++F+ +D V YN+M+AG +G + FE M E GF
Sbjct: 441 CGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE----------GGF 490
Query: 234 VNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-----W 288
P+ ++++ +L G + E + F SM +S +
Sbjct: 491 -----------------KPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHY 533
Query: 289 NAMIAAYAQDLQIDEAVKLF--IKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKD 346
MI Y + ++D+A++L I KD V I+ ++ ++ E+ ++ K
Sbjct: 534 TCMIDLYGKAYRLDKAIELMEGIDQVEKDAV----ILGAFLNACSWNKNTELVKEVEEKL 589
Query: 347 IAAETALMSGLIQ-------TGRVDEASKMFNQLSTRD 377
+ E + S IQ +GR DE ++ +Q+ ++
Sbjct: 590 LVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKE 627
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 186/657 (28%), Positives = 313/657 (47%), Gaps = 80/657 (12%)
Query: 148 ARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM-----PVKDLVSYNSMLAGY 202
AR + E + D WN++++GY+K F D +VF + V D ++ +++ Y
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 203 TQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLC 262
G+ F +M VV SG+V ++S S V M
Sbjct: 118 GALGR-----EFLGRMIHTLVVK-----SGYVCDVVVAS--------------SLVGM-- 151
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVS 318
+A+ + ++FD MP ++V SWN +I+ + Q + ++A++LF +M + VS
Sbjct: 152 -YAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVS 210
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT-GRVD---EASKMFNQLS 374
T I+ R+ L+ +E++ + K + + S L+ G+ D A ++F ++
Sbjct: 211 LTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
Query: 375 TRDTICWNSMIAGFCQSGRMDEALDLFRQM------PKKNSVSWNTM------------- 415
+ + WNSMI G+ G +++ +M P + +++ M
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKF 330
Query: 416 ISGYA--------------------QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL 455
I GY + G+ + AE +F ++ SWN +I+ ++
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 456 YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
+F A++ M G KPD TF + G Q+H I +S D + +A
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSA 450
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
L+ MY+KCG + A ++F +I D++SW +IS Y +G EA F +M + PD
Sbjct: 451 LLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPD 510
Query: 576 QVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
VT + +LSAC HAGL ++GL F M + IEP+ EHYSC++D+LGR GRL EA+ ++
Sbjct: 511 GVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEII 570
Query: 636 RGM-DVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
+ + NA L +L AC +H +G+ A L E P +AS Y+ L N++A W
Sbjct: 571 QQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESW 630
Query: 695 EEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHM 751
+ R+R+ M++ K PGCSWIE+ +++ F ++D LR E + L +S HM
Sbjct: 631 DAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHM 687
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 178/390 (45%), Gaps = 44/390 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
++V +S++ ++AK ++ Q+FD+M +R++ SWNT+I+ + + E+A +LF M
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 126 ----ERDNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFS 178
E ++ S + I+ +R LE+ +E+ K LD +A++ Y K
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD 238
A +VF MP K LV++NSM+ GY G + +M ++ G
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM----------IIEG------ 304
Query: 239 LSSARQLFEKIPNPNAVSWVTMLCGFAR---HGKITEARRLFDSMPCKNVVSWNAMIAAY 295
P+ ++ + M C +R HGK + S+ ++ ++I Y
Sbjct: 305 ---------TRPSQTTLTSILMACSRSRNLLHGKFIHG-YVIRSVVNADIYVNCSLIDLY 354
Query: 296 AQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC----KDIAAET 351
+ + + A +F K SW +I+ YI VG +A EVY+QM D+ T
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
+++ Q +++ ++ +S D + ++++ + + G EA +F +PKK
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
+ VSW MIS Y GQ A F M++
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQK 504
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 201/464 (43%), Gaps = 91/464 (19%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
M H L + S V + + K E +++VF +++ ++N++IS F ++G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 82 KISDARQLFDKMS----QRNLVSWNTMIAGY-----------LHNSMVEEASKLFDVMPE 126
+ A +LF +M + N VS I+ +H V++ +L
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL------ 241
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNL 186
D + + ++ Y + LE ARE+ + +P K A WN++I GY KG ++ N
Sbjct: 242 -DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA-WNSMIKGYVAKGDSKSCVEILNR 299
Query: 187 MPVK---------------------------------------DLVSYNSMLAGYTQNGK 207
M ++ D+ S++ Y + G+
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCG 263
LA F K + SWN+M+S +++ G+ A ++++++ + P+ V++ ++L
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 264 FAR----------HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH 313
++ H I+E+R D + +A++ Y++ EA ++F +P
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELL------LSALLDMYSKCGNEKEAFRIFNSIPK 473
Query: 314 KDGVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKM 369
KD VSWT +I+ Y G+ EA +++M D A++S G +DE K
Sbjct: 474 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKF 533
Query: 370 FNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQMPKKN 408
F+Q+ ++ I ++ MI ++GR+ EA ++ +Q P+ +
Sbjct: 534 FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETS 577
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 143/306 (46%), Gaps = 21/306 (6%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V + ++ ++ S+I ++ K G+ + A +F K + SWN MI+ Y+ +A
Sbjct: 335 VIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKA 394
Query: 118 SKLFDVM----PERDNFSWALMITCYTRKGKLEKAREL-LELVPDKLDT--ACWNAVIAG 170
+++D M + D ++ ++ ++ LEK +++ L + +L+T +A++
Sbjct: 395 VEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDM 454
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSW 226
Y+K G +A ++FN +P KD+VS+ M++ Y +G+ AL+ F++M + + V+
Sbjct: 455 YSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTL 514
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMP 281
++S ++G + + F ++ + P + M+ R G++ EA + P
Sbjct: 515 LAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTP 574
Query: 282 --CKNVVSWNAMIAAYAQDLQI---DEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAR 336
N + + +A L+ D +L ++ D ++ + N Y D AR
Sbjct: 575 ETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAAR 634
Query: 337 EVYNQM 342
V +M
Sbjct: 635 RVRLKM 640
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 154/370 (41%), Gaps = 41/370 (11%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H I S+ ++ I K G+ A VFS T ++N MIS + G
Sbjct: 332 HGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNW 391
Query: 84 SDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFSWALM 135
A +++D+M + ++V++ +++ + +E+ ++ + E D + +
Sbjct: 392 FKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSAL 451
Query: 136 ITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKG-------QFSDAEKVFNLMP 188
+ Y++ G ++A + +P K D W +I+ Y G QF + +K F L P
Sbjct: 452 LDMYSKCGNEKEAFRIFNSIPKK-DVVSWTVMISAYGSHGQPREALYQFDEMQK-FGLKP 509
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN-----VVSWNLMVSGFVNSGDLSSAR 243
D V+ ++L+ G + L FF +M K + ++ M+ +G L A
Sbjct: 510 --DGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAY 567
Query: 244 QLFEKIP----NPNAVSWVTMLCGFARHGKITE--ARRLFDSMPCKNVVSWNAMIAAYAQ 297
++ ++ P N +S + C + + AR L ++ P + ++ + YA
Sbjct: 568 EIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYP-DDASTYMVLFNLYAS 626
Query: 298 DLQIDEAVKLFIKMPH-----KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
D A ++ +KM K G SW + + D + + +++ A
Sbjct: 627 GESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRS-----HLRAENVYECLA 681
Query: 353 LMSGLIQTGR 362
L+SG +++G+
Sbjct: 682 LLSGHMESGQ 691
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 246/439 (56%), Gaps = 43/439 (9%)
Query: 351 TALMSGLIQTGRVDEASKMF--NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN 408
TAL+S + G V +A K+F N S++ ++C+N++I+G+ + ++ +A +FR+M K+
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRM-KET 150
Query: 409 SVS-------------------W---------------------NTMISGYAQAGQMDSA 428
VS W N+ I+ Y + G +++
Sbjct: 151 GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 429 ENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX 488
+F M + +++WN++I+G+ QN L +D L+ M G PD T
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
++G+++ + + +G++ ++FVSNA I+MYA+CG + A VF + L+SW ++I
Sbjct: 271 GAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMI 330
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAI 608
Y ++G F M+ + PD F+ +LSACSH+GL ++GL+LF+ M ++ +
Sbjct: 331 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 390
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAM 668
EP EHYSCLVDLLGR GRL+EA + M V+ + +WG+LLGAC++HKN+++ E A
Sbjct: 391 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFA 450
Query: 669 RLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL 728
++ E EP+N Y+ +SN+++++ E + R+RV+MR++ K PG S++E + ++ FL
Sbjct: 451 KVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFL 510
Query: 729 SDDSGRLRPETIQIILNAI 747
+ D + E + +L+ +
Sbjct: 511 AGDRSHEQTEEVHRMLDEL 529
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 21/260 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
NS I+++ K G + R+LFD+M + L++WN +I+GY N + + +L++ M
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 128 -DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKV 183
D F+ +++ G + E+ +LV + NA I+ YA+ G + A V
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDL 239
F++MPVK LVS+ +M+ Y +G + L F+ M ++ + + +++S +SG
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 240 SSARQLFEKI-------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAM 291
+LF + P P S + L G R G++ EA +SMP + + W A+
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLG--RAGRLDEAMEFIESMPVEPDGAVWGAL 432
Query: 292 IAAYAQDLQIDEAVKLFIKM 311
+ A +D A F K+
Sbjct: 433 LGACKIHKNVDMAELAFAKV 452
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 176/425 (41%), Gaps = 90/425 (21%)
Query: 101 WNTMIAGYLHNSMVEEASKLFDVM----PERDNFSWALMIT---------------CYTR 141
WN + + S+ E+ L+ M D FS+ ++ C+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 142 KGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVS--YNSML 199
KG E +L A+I+ Y K G +DA KVF P +S YN+++
Sbjct: 81 KGGCETEPFVL------------TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS----ARQLFEKIPNPNAV 255
+GYT N K+ A + F +M E V ++ + G V + R L +
Sbjct: 129 SGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188
Query: 256 SWVTMLCGFA----RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
S V +L F + G + RRLFD MP K +++WNA+I+ Y+Q+ + ++L+ +M
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 312 PH----KDGVSWTTII---------------------NGYI--------------RVGKL 332
D + +++ NG++ R G L
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 333 DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGF 388
+AR V++ MP K + + TA++ G + +F+ + R D + +++
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368
Query: 389 CQSGRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAME-ERNIVS 442
SG D+ L+LFR M ++ + ++ ++ +AG++D A ++M E +
Sbjct: 369 SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAV 428
Query: 443 WNSLI 447
W +L+
Sbjct: 429 WGALL 433
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
WN + SL+ +++ M R G PD +F G QLH ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS--WNSLISGYALNGYAIEA 560
K G + FV ALI+MY KCG V A +VF +S +N+LISGY N +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 561 FKAFKQMLSEEVVPDQVTFIGMLSACS 587
F++M V D VT +G++ C+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT 167
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 45 HLG--KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
HLG K+G E V SN N+ N+ IS++A+ G ++ AR +FD M ++LVSW
Sbjct: 269 HLGAKKIGH-EVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWT 327
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL------ 152
MI Y + M E LFD M +R D + ++++ + G +K EL
Sbjct: 328 AMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 387
Query: 153 -ELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGL 210
+L P +C ++ + G+ +A + MPV+ D + ++L + + +
Sbjct: 388 YKLEPGPEHYSCLVDLL---GRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDM 444
Query: 211 ALHFFEKMAE 220
A F K+ E
Sbjct: 445 AELAFAKVIE 454
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 147/478 (30%), Positives = 259/478 (54%), Gaps = 40/478 (8%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIR 328
A +F + N+ +N +I ++ + +A + +M D +++ +I
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 329 VGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
+ + + ++Q+ D+ E +L+ G + A ++F Q+ RD + W SM
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 385 IAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
+AG+C+ G ++ A ++F +MP +N +W+ MI+GYA+ + A ++F+ M+ +V+
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS 504
+++ + + + AL + G + +EY++KS
Sbjct: 250 TVMVSVISSCAHLGAL-------------------------------EFGERAYEYVVKS 278
Query: 505 GYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAF 564
+L + AL+ M+ +CG +E A VF + D +SW+S+I G A++G+A +A F
Sbjct: 279 HMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYF 338
Query: 565 KQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGR 624
QM+S +P VTF +LSACSH GL +GL++++ M +D IEP EHY C+VD+LGR
Sbjct: 339 SQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGR 398
Query: 625 MGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITL 684
G+L EA N + M VK NA + G+LLGAC+++KN E+ E L +++P ++ Y+ L
Sbjct: 399 AGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLL 458
Query: 685 SNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
SN++A AG+W+++E LR +M++K K PG S IE+ +I F D + PE +I
Sbjct: 459 SNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQK-HPEMGKI 515
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 18/292 (6%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
NS++ ++A G I+ A ++F +M R++VSW +M+AGY MVE A ++FD MP R+ F
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF 215
Query: 131 SWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLM 187
+W++MI Y + EKA +L E + + + +VI+ A G E+ + +
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYV 275
Query: 188 PVKDLVSYNSMLAG-----YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
VK ++ N +L + + G + A+H FE + E + +SW+ ++ G G A
Sbjct: 276 -VKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKA 334
Query: 243 RQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-----WNAMIA 293
F ++ + P V++ +L + G + + ++++M + + + ++
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK 345
+ ++ EA +KM K + G ++ K E E M K
Sbjct: 395 MLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIK 446
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTII 323
+A G I A R+F M ++VVSW +M+A Y + ++ A ++F +MPH++ +W+ +I
Sbjct: 162 YANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMI 221
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT----GRVDEASKMFNQLS----T 375
NGY + ++A +++ M + + A +M +I + G ++ + + + T
Sbjct: 222 NGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMT 281
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+ I +++ F + G +++A+ +F +P+ +S+SW+++I G A G A + F M
Sbjct: 282 VNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM 341
Query: 436 EERNIVSWNSLITGFLQNSLYFDALKS 462
+ GF+ + F A+ S
Sbjct: 342 ----------ISLGFIPRDVTFTAVLS 358
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 275 bits (704), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 225/389 (57%), Gaps = 3/389 (0%)
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMD 426
S+ F D+ C ++I + + G + A +F +M K++ WN MI+GY + G M
Sbjct: 106 SQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMK 165
Query: 427 SAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXX 485
+A +F +M +N+ SW ++I+GF QN Y +ALK + M ++ KP+ T
Sbjct: 166 AAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPAC 225
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI-ECVDLISW 544
++G +L Y ++G+ ++++V NA I MY+KCG ++ A+++F + +L SW
Sbjct: 226 ANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSW 285
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
NS+I A +G EA F QML E PD VTF+G+L AC H G+ +G +LFK M E
Sbjct: 286 NSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEE 345
Query: 605 DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGE 664
I P EHY C++DLLGR+G+L+EA+++++ M +K +A +WG+LLGAC H N+EI E
Sbjct: 346 VHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAE 405
Query: 665 FAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSW-IEVQNQ 723
A+ L +LEP N N + +SN++A +W+ V R+R LM+ + K G S+ +EV
Sbjct: 406 IASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVD 465
Query: 724 IQCFLSDDSGRLRPETIQIILNAISAHMR 752
+ F +D R I +L I M+
Sbjct: 466 VHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 175/388 (45%), Gaps = 49/388 (12%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCY 139
AR+LFD +N +I Y + E+ L++++ P F++ +
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 140 TRKGKLEKARELLELVPDKL-------DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL 192
+ L L+ + D+ C +I YAK G A +VF+ M +D+
Sbjct: 95 FSSARP------LRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDV 148
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF-----E 247
+N+M+ GY + G M A+ F+ M KNV SW ++SGF +G+ S A ++F +
Sbjct: 149 PVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKD 208
Query: 248 KIPNPNAVSWVTMLCGFARHGKITEARRL---------FDSMPCKNVVSWNAMIAAYAQD 298
K PN ++ V++L A G++ RRL FD N+ NA I Y++
Sbjct: 209 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFD-----NIYVCNATIEMYSKC 263
Query: 299 LQIDEAVKLFIKMPHKDGV-SWTTIINGYIRVGKLDEAREVYNQM----PCKDIAAETAL 353
ID A +LF ++ ++ + SW ++I GK DEA ++ QM D L
Sbjct: 264 GMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGL 323
Query: 354 MSGLIQTGRVDEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQMP-KK 407
+ + G V + ++F + I + MI + G++ EA DL + MP K
Sbjct: 324 LLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKP 383
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAM 435
++V W T++ + G ++ AE +A+
Sbjct: 384 DAVVWGTLLGACSFHGNVEIAEIASEAL 411
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 41/283 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
++I+ +AK G + AR++FD+MS+R++ WN MI GY ++ A +LFD MP ++
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 131 SWALMITCYTRKGKLEKARELL-------ELVPDKLDT-----ACWN-------AVIAGY 171
SW +I+ +++ G +A ++ + P+ + AC N + GY
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA-EKNVVSWNLMV 230
A++ F D ++ N+ + Y++ G + +A FE++ ++N+ SWN M+
Sbjct: 241 ARENGFFD-----------NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 231 SGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
G A LF ++ P+AV++V +L G + + + LF SM + +
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 287 S-----WNAMIAAYAQDLQIDEAVKLFIKMPHK-DGVSWTTII 323
S + MI + ++ EA L MP K D V W T++
Sbjct: 350 SPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLL 392
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLF-----DKMS 94
N I + G ++ A+ +F + KN+ ++ ++IS F++NG S+A ++F DK
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 95 QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER---DN-FSWALMITCYTRKGKLEKARE 150
+ N ++ +++ + +E +L E DN + I Y++ G ++ A+
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 151 LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNG 206
L E + ++ + WN++I A G+ +A +F M D V++ +L G
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGG 331
Query: 207 KMGLALHFFEKMAEKNVVS-----WNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTM 260
+ F+ M E + +S + M+ G L A L + +P P+AV W T+
Sbjct: 332 MVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTL 391
Query: 261 LCGFARHGKI 270
L + HG +
Sbjct: 392 LGACSFHGNV 401
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 4/183 (2%)
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
A +F + +N LI + + +++ L+ +G +P TF
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSL 547
+ LH +SG+ +D F LI YAK G + A +VF + D+ WN++
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFA 607
I+GY G A + F M + V ++ ++S S G ++ L +F CM +D +
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNV----TSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 608 IEP 610
++P
Sbjct: 211 VKP 213
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 275 bits (704), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 207/749 (27%), Positives = 369/749 (49%), Gaps = 86/749 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY--------LHNSMVEEAS-KLF 121
N++IS++ + + AR++FDKM QRN+V+ + A + LH+ +++ S ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 122 DVMPERDNFSWALMIT--CYTRKGKLEKARELLELVPDKLDTACW------NAVIAGYAK 173
MP + S + +T C + L++AR++ LV A N +I+ Y +
Sbjct: 86 FFMPLNEIASSVVELTRKCVSIT-VLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG-----LALHFFEKMAEKNVVSWNL 228
G A KVF+ MP +++VSYN++ + Y++N L H + + N ++
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 229 MVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
+V D+ L +I + N V ++L ++ G + ARR+FD + ++
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD 264
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVG-----KLDEA 335
V+WN MI ++ +I++ + F M +++ ++NG ++G KL A
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA 324
Query: 336 REVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMD 395
R + + D+ + AL+ G + EA +F ++ + + WNS+I+G ++G +
Sbjct: 325 RIIVSD-SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGE 383
Query: 396 EALDLFRQM-----PKKNSVSWNTMISGYAQA----------GQM--------------- 425
+A+ ++R++ P+ + +++ IS A+ GQ+
Sbjct: 384 QAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTL 443
Query: 426 ----------DSAENIFQAMEERNIVSWNSLITGF--LQNSLYFDALKSLVLMGREGKKP 473
+SA+ +F M+ER++V W +I G L NS A++ + M RE +
Sbjct: 444 LSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSEL--AVQFFIEMYREKNRS 501
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
D + + G H +++G+ + V AL+ MY K G+ E+AE +F
Sbjct: 502 DGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIF 561
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
+ DL WNS++ Y+ +G +A F+Q+L +PD VT++ +L+ACSH G
Sbjct: 562 SLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTL 621
Query: 594 QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN-AGLWGSLLG 652
QG L+ M E I+ +HYSC+V+L+ + G ++EA ++ N A LW +LL
Sbjct: 622 QGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLS 680
Query: 653 ACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
AC +NL+IG +AA ++ +L+P + + +I LSN++A GRWE+V +R +R + K
Sbjct: 681 ACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKD 740
Query: 713 PGCSWIEV-QNQIQCFLSDDSGRLRPETI 740
PG SWIEV N Q F S D PE +
Sbjct: 741 PGLSWIEVNNNNTQVFSSGDQS--NPEVV 767
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 208/355 (58%), Gaps = 4/355 (1%)
Query: 397 ALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
A LF +M ++N VSW M+SGYA++G + +A +F+ M ER++ SWN+++ QN L+
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 457 FDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
+A+ M E +P++ T Q+ +H + + +D+FVSN+
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNS 300
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS---EEV 572
L+ +Y KCG +E A VF L +WNS+I+ +AL+G + EA F++M+ ++
Sbjct: 301 LVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDI 360
Query: 573 VPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAF 632
PD +TFIG+L+AC+H GL ++G F M F IEP EHY CL+DLLGR GR +EA
Sbjct: 361 KPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEAL 420
Query: 633 NVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAG 692
V+ M +KA+ +WGSLL AC++H +L++ E A L L P+N ++N++ E G
Sbjct: 421 EVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMG 480
Query: 693 RWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAI 747
WEE R R +++ + A K PG S IE+ N++ F S D E I +IL+++
Sbjct: 481 NWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 152/335 (45%), Gaps = 29/335 (8%)
Query: 132 WALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQF--SDAEKVFNLMPV 189
+ L+ C R L AR + + +T + AV+ Y+ S A F LM
Sbjct: 60 FKLLRFCTLRLCNLSYARFIFDRFSFP-NTHLYAAVLTAYSSSLPLHASSAFSFFRLMVN 118
Query: 190 KDLVSYNSMLAGYTQNGKMGLA---------LHFFEKMAEKNVVSWNLMVSGFVNS-GDL 239
+ + N + L+ H F+ VV ++ + +S +
Sbjct: 119 RSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHI 178
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
+ ARQLF+++ N VSW ML G+AR G I+ A LF+ MP ++V SWNA++AA Q+
Sbjct: 179 TLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNG 238
Query: 300 QIDEAVKLFIKMPHKDG-----VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
EAV LF +M ++ V+ +++ + G L A+ ++ +D++++ +
Sbjct: 239 LFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVS 298
Query: 355 SGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN-- 408
+ L+ + G ++EAS +F S + WNSMI F GR +EA+ +F +M K N
Sbjct: 299 NSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIN 358
Query: 409 -----SVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+++ +++ G + F M R
Sbjct: 359 DIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNR 393
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 28/305 (9%)
Query: 56 VRVFSNTIHKNLVTYNSMISVFAKN-GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMV 114
+F + H +V +++ +A + I+ ARQLFD+MS+RN+VSW M++GY + +
Sbjct: 150 THLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDI 209
Query: 115 EEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE-------LVPDKLDTACWNAV 167
A LF+ MPERD SW ++ T+ G +A L + P+++ C V
Sbjct: 210 SNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVC---V 266
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVS----YNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
++ A+ G A+ + +DL S NS++ Y + G + A F+ ++K++
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKI-------PNPNAVSWVTMLCGFARHGKITEARRL 276
+WN M++ F G A +FE++ P+ ++++ +L G +++ R
Sbjct: 327 TAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGY 386
Query: 277 FDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-DGVSWTTIINGYIRVG 330
FD M + + + +I + + DEA+++ M K D W +++N G
Sbjct: 387 FDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
Query: 331 KLDEA 335
LD A
Sbjct: 447 HLDLA 451
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 147/313 (46%), Gaps = 24/313 (7%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
+ + A ++F +N+V++ +M+S +A++G IS+A LF+ M +R++ SWN ++A
Sbjct: 175 VSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAAC 234
Query: 109 LHNSMVEEASKLFDVM---PE-RDN-FSWALMITCYTRKGKLEKARELLELVPDK---LD 160
N + EA LF M P R N + +++ + G L+ A+ + + D
Sbjct: 235 TQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSD 294
Query: 161 TACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE 220
N+++ Y K G +A VF + K L ++NSM+ + +G+ A+ FE+M +
Sbjct: 295 VFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK 354
Query: 221 KNV-------VSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHG 268
N+ +++ +++ + G +S R F+ + N P + ++ R G
Sbjct: 355 LNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
Query: 269 KITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQID---EAVKLFIKMPHKDGVSWTTIIN 324
+ EA + +M K + W +++ A +D AVK + + +G + N
Sbjct: 415 RFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMAN 474
Query: 325 GYIRVGKLDEARE 337
Y +G +EAR
Sbjct: 475 LYGEMGNWEEARR 487
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 22/191 (11%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
VF N + GK G +EEA VF K+L +NSMI+ FA +G+ +A +F++M +
Sbjct: 295 VFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK 354
Query: 96 RNL-------VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKG 143
N+ +++ ++ H +V + FD+M R + +I R G
Sbjct: 355 LNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
Query: 144 KLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
+ ++A E++ + K D A W +++ G AE + VK+LV+ N GY
Sbjct: 415 RFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAE-----VAVKNLVALNPNNGGYV 469
Query: 204 Q-----NGKMG 209
G+MG
Sbjct: 470 AMMANLYGEMG 480
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 497 LHEYILKSGYINDLFVSNALIAMYA-KCGRVESAEQVFTAIECVDLISWNSLISGYAL-- 553
+H ++ KSG+ + V AL+ YA + A Q+F + +++SW +++SGYA
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 554 -----------------------------NGYAIEAFKAFKQMLSEEVV-PDQVTFIGML 583
NG +EA F++M++E + P++VT + +L
Sbjct: 208 DISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 584 SACSHAGLAN--QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
SAC+ G +G+ F D + + + LVDL G+ G LEEA +V + M K
Sbjct: 268 SACAQTGTLQLAKGIHAF-AYRRDLSSDVFVS--NSLVDLYGKCGNLEEASSVFK-MASK 323
Query: 642 ANAGLWGSLLGACRVHKNLE-----IGEFAAMRLSELEPHNASNYITLSNMHAEAG 692
+ W S++ +H E E + +++++P + + +I L N G
Sbjct: 324 KSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHIT-FIGLLNACTHGG 378
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/482 (31%), Positives = 258/482 (53%), Gaps = 14/482 (2%)
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-----DG 316
C + + ARRL P + +N ++ Y++ + +V +F++M K D
Sbjct: 47 CAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDS 106
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQ 372
S+ +I L +++ Q + + + + LI G V+ A K+F++
Sbjct: 107 FSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDE 166
Query: 373 LSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIF 432
+ + + WN++I + + A ++F +M +N SWN M++GY +AG+++SA+ IF
Sbjct: 167 MHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIF 226
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ 492
M R+ VSW+++I G N + ++ + R G P++ + +
Sbjct: 227 SEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFE 286
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE---CVDLISWNSLIS 549
G LH ++ K+GY + V+NALI MY++CG V A VF ++ C+ +SW S+I+
Sbjct: 287 FGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCI--VSWTSMIA 344
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
G A++G EA + F +M + V PD ++FI +L ACSHAGL +G D F M + IE
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 404
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMR 669
P EHY C+VDL GR G+L++A++ + M + A +W +LLGAC H N+E+ E R
Sbjct: 405 PEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQR 464
Query: 670 LSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLS 729
L+EL+P+N+ + + LSN +A AG+W++V +R M +R K S +EV + F +
Sbjct: 465 LNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTA 524
Query: 730 DD 731
+
Sbjct: 525 GE 526
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 166/343 (48%), Gaps = 26/343 (7%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
+ + + +L ++I ++ G + AR++FD+M Q NLV+WN +I + V
Sbjct: 131 QALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAG 190
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQ 176
A ++FD M R++ SW +M+ Y + G+LE A+ + +P + D + W+ +I G A G
Sbjct: 191 AREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVS-WSTMIVGIAHNGS 249
Query: 177 FSDAEKVFNLMPVKDL----VSYNSMLAGYTQNG--KMGLALHFFEKMAEKNVVSW---- 226
F+++ F + + VS +L+ +Q+G + G LH F EK SW
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF---VEKAGYSWIVSV 306
Query: 227 -NLMVSGFVNSGDLSSARQLFEKIPNPNA-VSWVTMLCGFARHGKITEARRLFDSMPCKN 284
N ++ + G++ AR +FE + VSW +M+ G A HG+ EA RLF+ M
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 285 V----VSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-----WTTIINGYIRVGKLDEA 335
V +S+ +++ A + I+E F +M + + +++ Y R GKL +A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 336 REVYNQMPCKDIA-AETALMSGLIQTGRVDEASKMFNQLSTRD 377
+ QMP A L+ G ++ A ++ +L+ D
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELD 469
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 161/344 (46%), Gaps = 32/344 (9%)
Query: 21 SMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKN 80
++KH L H+F I G G VE A +VF NLV +N++I+ +
Sbjct: 132 ALKHGLE------SHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 81 GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYT 140
++ AR++FDKM RN SWN M+AGY+ +E A ++F MP RD+ SW+ MI
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 141 RKGKLEKA----RELLE--LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVS 194
G ++ REL + P+++ V++ ++ G F + K+ + K S
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSL---TGVLSACSQSGSF-EFGKILHGFVEKAGYS 301
Query: 195 Y-----NSMLAGYTQNGKMGLALHFFEKMAEKN-VVSWNLMVSGFVNSGDLSSARQLFEK 248
+ N+++ Y++ G + +A FE M EK +VSW M++G G A +LF +
Sbjct: 302 WIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNE 361
Query: 249 IP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPC-----KNVVSWNAMIAAYAQDL 299
+ P+ +S++++L + G I E F M + + M+ Y +
Sbjct: 362 MTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSG 421
Query: 300 QIDEAVKLFIKMP-HKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
++ +A +MP + W T++ G ++ A +V ++
Sbjct: 422 KLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL 465
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 155/326 (47%), Gaps = 22/326 (6%)
Query: 130 FSWALMITC-YTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMP 188
F+ L++ C + L AR LL P+ D +N ++ GY++ + ++ VF M
Sbjct: 39 FTGKLILHCAISISDALPYARRLLLCFPEP-DAFMFNTLVRGYSESDEPHNSVAVFVEMM 97
Query: 189 VKDLVSYNSMLAGYT-------QNGKMGLALHF--FEKMAEKNVVSWNLMVSGFVNSGDL 239
K V +S + ++ + G +H + E ++ ++ + G +
Sbjct: 98 RKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCV 157
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
AR++F+++ PN V+W ++ R + AR +FD M +N SWN M+A Y +
Sbjct: 158 EFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAG 217
Query: 300 QIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEA----REVYNQMPCKDIAAETALMS 355
+++ A ++F +MPH+D VSW+T+I G G +E+ RE+ + + T ++S
Sbjct: 218 ELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLS 277
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICW-----NSMIAGFCQSGRMDEALDLFRQMPKKNS- 409
Q+G E K+ + + W N++I + + G + A +F M +K
Sbjct: 278 ACSQSGSF-EFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCI 336
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAM 435
VSW +MI+G A GQ + A +F M
Sbjct: 337 VSWTSMIAGLAMHGQGEEAVRLFNEM 362
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 249/459 (54%), Gaps = 13/459 (2%)
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
T ++ Y + L++AR+V ++MP K++ + TA++S QTG EA +F ++ D
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWN---------TMISGYAQAGQMDSAEN 430
A S L L +Q+ V WN +++ YA+AGQ+ A
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQI-HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
IF+ + ER++VS ++I G+ Q L +AL+ + EG P+ T+
Sbjct: 210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLAL 269
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISG 550
G Q H ++L+ + N+LI MY+KCG + A ++F + ISWN+++ G
Sbjct: 270 LDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVG 329
Query: 551 YALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE-DFAI 608
Y+ +G E + F+ M E+ V PD VT + +LS CSH + + GL++F MV ++
Sbjct: 330 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGT 389
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAM 668
+P EHY C+VD+LGR GR++EAF ++ M K AG+ GSLLGACRVH +++IGE
Sbjct: 390 KPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGR 449
Query: 669 RLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL 728
RL E+EP NA NY+ LSN++A AGRW +V +R +M K K PG SWI+ + + F
Sbjct: 450 RLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFH 509
Query: 729 SDDSGRLRPETIQIILNAISAHMRDKFNVFNMQSV-FDI 766
++D R E + + IS M+ V ++ V +D+
Sbjct: 510 ANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDV 548
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 50/276 (18%)
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
P +L + + + +AR++ D MP KNVVSW AMI+ Y+Q EA+ +F +M
Sbjct: 85 PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 144
Query: 312 PHKDG------------------------------VSW---------TTIINGYIRVGKL 332
DG V W +++++ Y + G++
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQI 204
Query: 333 DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGF 388
EARE++ +P +D+ + TA+++G Q G +EA +MF++L + + + + S++
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 389 CQSGRMDEALD-----LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSW 443
+D L R++P +V N++I Y++ G + A +F M ER +SW
Sbjct: 265 SGLALLDHGKQAHCHVLRRELPFY-AVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTF 478
N+++ G+ ++ L + L+ LM E + KPD T
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTL 359
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 151/334 (45%), Gaps = 57/334 (17%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDN--- 129
++ + K + DAR++ D+M ++N+VSW MI+ Y EA +F M D
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPN 152
Query: 130 -FSWALMITCYTRKGKLEKARELLELVPD-KLDTACW--NAVIAGYAKKGQFSDAEKVFN 185
F++A ++T R L +++ L+ D+ + ++++ YAK GQ +A ++F
Sbjct: 153 EFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFE 212
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSW--------------- 226
+P +D+VS +++AGY Q G AL F ++ + N V++
Sbjct: 213 CLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272
Query: 227 --------------------NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFAR 266
N ++ + G+LS AR+LF+ +P A+SW ML G+++
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332
Query: 267 HGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKM-----PHKDG 316
HG E LF M + + V+ A+++ + D + +F M K G
Sbjct: 333 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPG 392
Query: 317 VS-WTTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
+ I++ R G++DEA E +MP K A
Sbjct: 393 TEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAG 426
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
V NS+I +++K G +S AR+LFD M +R +SWN M+ GY + + E +LF +M
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM 346
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 266/480 (55%), Gaps = 14/480 (2%)
Query: 289 NAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
+++IAA + I+ L K+ ++ G ++ Y+R+G A +++++MP
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDT------ICWNSMIAGFCQSGRMDEAL 398
+D+ + +L+SG G + + ++ +++ + + + SMI+ G +E
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 399 DLFRQMPKKNSVS----WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
+ + K + N I+ Y + G + S+ +F+ + +N+VSWN++I LQN
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
L L + R G +PDQ+TF ++ +H I+ G+ + ++
Sbjct: 215 LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITT 274
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
AL+ +Y+K GR+E + VF I D ++W ++++ YA +G+ +A K F+ M+ + P
Sbjct: 275 ALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISP 334
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
D VTF +L+ACSH+GL +G F+ M + + I+P +HYSC+VDLLGR G L++A+ +
Sbjct: 335 DHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGL 394
Query: 635 VRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
++ M ++ ++G+WG+LLGACRV+K+ ++G AA RL ELEP + NY+ LSN+++ +G W
Sbjct: 395 IKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLW 454
Query: 695 EEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDK 754
++ R+R LM+ K + GCS+IE N+I F+ D E IQ L I M+ +
Sbjct: 455 KDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSE 514
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 150/302 (49%), Gaps = 34/302 (11%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----- 219
+ ++ Y + G AEK+F+ MP +DLVS+NS+++GY+ G +G +M
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 220 -EKNVVSWNLMVSGFVNSGDLSSAR---------QLFEKIPNPNA-VSWVTMLCGFARHG 268
N V++ M+S V G R + E++ NA ++W + + G
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINW------YGKTG 183
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF---IKMPHK-DGVSWTTIIN 324
+T + +LF+ + KN+VSWN MI + Q+ ++ + F ++ H+ D ++ ++
Sbjct: 184 DLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLR 243
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTIC 380
+G + A+ ++ + + + + L+ + GR++++S +F+++++ D++
Sbjct: 244 SCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMA 303
Query: 381 WNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
W +M+A + G +A+ F M + V++ +++ + +G ++ ++ F+ M
Sbjct: 304 WTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMS 363
Query: 437 ER 438
+R
Sbjct: 364 KR 365
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 201/448 (44%), Gaps = 40/448 (8%)
Query: 60 SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVE 115
S+ +H +S+I+ I R L K+ S R+ + ++ YL
Sbjct: 24 SSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDV 83
Query: 116 EASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELV--------PDKLD-TACWNA 166
A KLFD MPERD SW +I+ Y+ +G L K E+L + P+++ + +A
Sbjct: 84 CAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISA 143
Query: 167 VIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSW 226
+ G +K+ V ++++ N+ + Y + G + + FE ++ KN+VSW
Sbjct: 144 CVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSW 203
Query: 227 NLMVSGFVNSGDLSSARQLF---EKIPN-PNAVSWVTML--C---GFARHGKITEARRLF 277
N M+ + +G F ++ + P+ +++ +L C G R + +F
Sbjct: 204 NTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMF 263
Query: 278 DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEARE 337
++ A++ Y++ +++++ +F ++ D ++WT ++ Y G +A +
Sbjct: 264 GGFSGNKCIT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 338 VYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGF 388
+ M I+ + T L++ +G V+E F +S R I ++ M+
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Query: 389 CQSGRMDEALDLFRQMP-KKNSVSWNTMISGY-----AQAGQMDSAENIFQAMEERNIVS 442
+SG + +A L ++MP + +S W ++ Q G +AE +F+ +E R+ +
Sbjct: 383 GRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGT-KAAERLFE-LEPRDGRN 440
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREG 470
+ L + + L+ DA + LM ++G
Sbjct: 441 YVMLSNIYSASGLWKDASRIRNLMKQKG 468
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 140/301 (46%), Gaps = 26/301 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD----VMPE 126
N+ I+ + K G ++ + +LF+ +S +NLVSWNTMI +L N + E+ F+ V E
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELV------PDKLDTACWNAVIAGYAKKGQFSDA 180
D ++ ++ G + A+ + L+ +K T A++ Y+K G+ D+
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT---TALLDLYSKLGRLEDS 289
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNS 236
VF+ + D +++ +MLA Y +G A+ FE M + V++ +++ +S
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 237 GDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNA 290
G + + FE + +P + M+ R G + +A L MP + W A
Sbjct: 350 GLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGA 409
Query: 291 MIAA--YAQDLQI-DEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
++ A +D Q+ +A + ++ +DG ++ + N Y G +A + N M K +
Sbjct: 410 LLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGL 469
Query: 348 A 348
Sbjct: 470 V 470
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 253/471 (53%), Gaps = 24/471 (5%)
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
P P VS+ A + + + N + N++I AYA + A+ +F
Sbjct: 85 PEPKTVSY---------------AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFR 129
Query: 310 KM---P-HKDGVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTG 361
+M P D S+T ++ +E R+++ D+ E L++ ++G
Sbjct: 130 EMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSG 189
Query: 362 RVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQ 421
+ A K+ +++ RD + WNS+++ + + G +DEA LF +M ++N SWN MISGYA
Sbjct: 190 YFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAA 249
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL-VLMGREGKKPDQSTFXX 480
AG + A+ +F +M R++VSWN+++T + Y + L+ ++ +KPD T
Sbjct: 250 AGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVS 309
Query: 481 XXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVD 540
G +H YI K G + F++ AL+ MY+KCG+++ A +VF A D
Sbjct: 310 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRD 369
Query: 541 LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK 600
+ +WNS+IS +++G +A + F +M+ E P+ +TFIG+LSAC+H G+ +Q LF+
Sbjct: 370 VSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFE 429
Query: 601 CMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNL 660
M + +EP EHY C+VDLLGRMG++EEA +V + + L SLLGAC+ L
Sbjct: 430 MMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQL 489
Query: 661 EIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
E E A RL EL ++S Y +SN++A GRWE+V R MR +R +
Sbjct: 490 EQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 143 bits (361), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 181/372 (48%), Gaps = 49/372 (13%)
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSWALMI 136
+S A + +++ N + N++I Y ++S E A +F V P++ +F++ L
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLK- 148
Query: 137 TCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
C G E+ R++ L + K G V D+ N
Sbjct: 149 ACAAFCG-FEEGRQIHGL----------------FIKSGL------------VTDVFVEN 179
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS 256
+++ Y ++G +A ++M ++ VSWN ++S ++ G + AR LF+++ N S
Sbjct: 180 TLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVES 239
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----- 311
W M+ G+A G + EA+ +FDSMP ++VVSWNAM+ AYA +E +++F KM
Sbjct: 240 WNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDST 299
Query: 312 PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEAS 367
DG + ++++ +G L + V+ + I E L + L+ + G++D+A
Sbjct: 300 EKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKAL 359
Query: 368 KMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAG 423
++F S RD WNS+I+ G +AL++F +M K N +++ ++S G
Sbjct: 360 EVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVG 419
Query: 424 QMDSAENIFQAM 435
+D A +F+ M
Sbjct: 420 MLDQARKLFEMM 431
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 193/398 (48%), Gaps = 44/398 (11%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H L I S VF +N + G+ G E A +V ++ V++NS++S + + G +
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKG 143
+AR LFD+M +RN+ SWN MI+GY +V+EA ++FD MP RD SW M+T Y G
Sbjct: 223 DEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG 282
Query: 144 ----KLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
LE ++L+ +K D +V++ A G S E V + K + L
Sbjct: 283 CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYID-KHGIEIEGFL 341
Query: 200 AG-----YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP---- 250
A Y++ GK+ AL F ++++V +WN ++S G A ++F ++
Sbjct: 342 ATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF 401
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
PN ++++ +L G + +AR+LF+ M + Y + I+
Sbjct: 402 KPNGITFIGVLSACNHVGMLDQARKLFEMMS-----------SVYRVEPTIEH------- 443
Query: 311 MPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAA-ETALMSGLIQTGRVDEASKM 369
+ +++ R+GK++EA E+ N++P + + +L+ + G++++A ++
Sbjct: 444 --------YGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERI 495
Query: 370 FN---QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
N +L+ RD+ + M + GR ++ +D R M
Sbjct: 496 ANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 496 QLHEYILKSGYINDLFVSNALIAMYA---KCGRVESAEQVFTAIECVDLISWNSLISGYA 552
Q H ++LK+G +D F ++ L+A A + V A + I + + NS+I YA
Sbjct: 57 QAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYA 116
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS-----HAGLANQGLDLFKCMVEDFA 607
+ A F++ML V PD+ +F +L AC+ G GL + +V D
Sbjct: 117 NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVF 176
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAA 667
+E + LV++ GR G E A V+ M V+ +A W SLL A + K L + E A
Sbjct: 177 VE------NTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSA-YLEKGL-VDEARA 227
Query: 668 MRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
+ E+E N ++ + + +A AG +E + +
Sbjct: 228 L-FDEMEERNVESWNFMISGYAAAGLVKEAKEV 259
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 272 bits (695), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 265/498 (53%), Gaps = 15/498 (3%)
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIIN-----GYIRVGKLD 333
+N NA+I ++ + + +V+ FI M D +++ ++ G+ +G+
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 334 EAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFC 389
A + N + C D +L+ +TG++ A ++F + R + WN +I G+C
Sbjct: 149 HAATLKNFVDC-DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYC 207
Query: 390 QSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITG 449
++ M A LFR MP++NS SW+T+I GY +G+++ A+ +F+ M E+N+VSW +LI G
Sbjct: 208 RAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLING 267
Query: 450 FLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
F Q Y A+ + M +G KP++ T G ++H YIL +G D
Sbjct: 268 FSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLD 327
Query: 510 LFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS 569
+ AL+ MYAKCG ++ A VF+ + D++SW ++I G+A++G +A + F+QM+
Sbjct: 328 RAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMY 387
Query: 570 EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLE 629
PD+V F+ +L+AC ++ + GL+ F M D+AIEP +HY +VDLLGR G+L
Sbjct: 388 SGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLN 447
Query: 630 EAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHA 689
EA +V M + + W +L AC+ HK E + L EL+P +YI L HA
Sbjct: 448 EAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHA 507
Query: 690 EAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNA-IS 748
G ++VE+ R+ ++ + + G S+IE+ Q+ F + D + I + L+ IS
Sbjct: 508 SKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIIS 567
Query: 749 AHMRDKFNVFNMQSVFDI 766
++ +N S+ DI
Sbjct: 568 LAIQKGYNPGADWSIHDI 585
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 197/424 (46%), Gaps = 47/424 (11%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISD-ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
V S+ + LV+ +S++ K D + +F +RN N +I G N+ E
Sbjct: 57 VLSSRVAAQLVSCSSLL-------KSPDYSLSIFRNSEERNPFVLNALIRGLTENARFES 109
Query: 117 ASKLFDVM------PERDNFSWALMITC---YTRKGKLEKARELLELVPDKLDTACWNAV 167
+ + F +M P+R F + L + G+ A L V D+ ++
Sbjct: 110 SVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFV--DCDSFVRLSL 167
Query: 168 IAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
+ YAK GQ A +VF P + ++ +N ++ GY + M +A F M E+N
Sbjct: 168 VDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNS 227
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
SW+ ++ G+V+SG+L+ A+QLFE +P N VSW T++ GF++ G A + M K
Sbjct: 228 GSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 284 ----NVVSWNAMIAAYAQDLQIDEAVKLF-------IKMPHKDGVSWTTIINGYIRVGKL 332
N + A+++A ++ + +++ IK+ G T +++ Y + G+L
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIG---TALVDMYAKCGEL 344
Query: 333 DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL----STRDTICWNSMIAGF 388
D A V++ M KDI + TA++ G GR +A + F Q+ D + + +++
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 389 CQSGRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAME-ERNIVS 442
S +D L+ F M ++ + ++ +AG+++ A + + M ++ +
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTT 464
Query: 443 WNSL 446
W +L
Sbjct: 465 WAAL 468
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 55 AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMV 114
A +F + +N +++++I + +G+++ A+QLF+ M ++N+VSW T+I G+
Sbjct: 215 ATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDY 274
Query: 115 EEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAV 167
E A + M E+ + ++ A +++ ++ G L + + D KLD A A+
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTAL 334
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNV 223
+ YAK G+ A VF+ M KD++S+ +M+ G+ +G+ A+ F +M + +
Sbjct: 335 VDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDE 394
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFD 278
V + +++ +NS ++ F+ + P +V ++ R GK+ EA L +
Sbjct: 395 VVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVE 454
Query: 279 SMPC-KNVVSWNAMIAA 294
+MP ++ +W A+ A
Sbjct: 455 NMPINPDLTTWAALYRA 471
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 16/236 (6%)
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
D + +IF+ EERN N+LI G +N+ + +++ +LM R G KPD+ TF
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA----IECVDL 541
+G LH LK+ D FV +L+ MYAK G+++ A QVF I+ +
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
+ WN LI+GY A F+ M + ++ ++ +G N+ LF+
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFEL 252
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLLGAC 654
M E + ++ L++ + G E A + M +K N ++L AC
Sbjct: 253 MPEKNVVS-----WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWN 102
K G+++ A VFSN HK+++++ +MI +A +G+ A Q F +M + + V +
Sbjct: 339 AKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFL 398
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFS-------WALMITCYTRKGKLEKARELLELV 155
++ L++S V+ FD M R +++ + L++ R GKL +A EL+E +
Sbjct: 399 AVLTACLNSSEVDLGLNFFDSM--RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM 456
Query: 156 PDKLDTACWNAVIAGYAKKGQFSDAEKV 183
P D W A+ + AE V
Sbjct: 457 PINPDLTTWAALYRACKAHKGYRRAESV 484
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 234/435 (53%), Gaps = 8/435 (1%)
Query: 315 DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT----GRVDEASKMF 370
D W +I G+ + + + +Y +M C L++ +E +++
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 371 NQLST----RDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMD 426
Q++ D NS+I + +G A LF ++P+ + VSWN++I GY +AG+MD
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 427 SAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXX 486
A +F+ M E+N +SW ++I+G++Q + +AL+ M +PD +
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 487 XXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNS 546
+ G +H Y+ K+ D + LI MYAKCG +E A +VF I+ + +W +
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 547 LISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF 606
LISGYA +G+ EA F +M + P+ +TF +L+ACS+ GL +G +F M D+
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFA 666
++P EHY C+VDLLGR G L+EA ++ M +K NA +WG+LL ACR+HKN+E+GE
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQC 726
L ++P++ Y+ +N+HA +W++ R LM+++ K+PGCS I ++
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 727 FLSDDSGRLRPETIQ 741
FL+ D E IQ
Sbjct: 499 FLAGDRSHPEIEKIQ 513
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 172/358 (48%), Gaps = 25/358 (6%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PERDNFSWALMITCYTR 141
A+ +FD + + WN MI G+ + E + L+ M + +++ ++ +
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 142 KGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
E+ ++ + + D N++I YA G F A +F+ +P D VS+NS+
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNA 254
+ GY + GKM +AL F KMAEKN +SW M+SG+V + A QLF ++ N P+
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIK 310
VS L A+ G + + + + + + V +I YA+ +++EA+++F
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 311 MPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEA 366
+ K +WT +I+GY G EA + +M I TA+++ TG V+E
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 367 SKMFNQL----STRDTI-CWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISG 418
+F + + + TI + ++ ++G +DEA ++MP K N+V W ++
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 158/333 (47%), Gaps = 20/333 (6%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
V+ N I G + A +F + V++NS+I + K GK+ A LF KM++
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 96 RNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAR-- 149
+N +SW TMI+GY+ M +EA +LF M E DN S A ++ + G LE+ +
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 150 -ELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
L ++D+ +I YAK G+ +A +VF + K + ++ ++++GY +G
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 209 GLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVT 259
A+ F +M + NV+++ +++ +G + + +F + P +
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 260 MLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAA--YAQDLQIDEAV-KLFIKMPHKD 315
++ R G + EA+R MP K N V W A++ A +++++ E + ++ I +
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYH 449
Query: 316 GVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA 348
G + N + K D+A E M + +A
Sbjct: 450 GGRYVHKANIHAMDKKWDKAAETRRLMKEQGVA 482
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 118/294 (40%), Gaps = 45/294 (15%)
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR---EGKKPDQSTFXXXXXX 484
A+ +F + + WN +I GF S + +SL+L R + TF
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGF---SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
+ Q+H I K GY ND++ N+LI YA G + A +F I D +SW
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 545 NSLISGYA--------------------------LNGYA-----IEAFKAFKQMLSEEVV 573
NS+I GY ++GY EA + F +M + +V
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN 633
PD V+ LSAC+ G QG + I + L+D+ + G +EEA
Sbjct: 245 PDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 634 VVRGMDVKANAGLWGSLLG--ACRVHKNLEIGEFAAMRLSELEPHNASNYITLS 685
V + + K + W +L+ A H I +F M+ ++P N IT +
Sbjct: 304 VFKNIK-KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP----NVITFT 352
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 188/647 (29%), Positives = 301/647 (46%), Gaps = 77/647 (11%)
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
Y K + A ++F+ MP ++++S+NS+++GYTQ G A+ F + E N L +
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREAN-----LKL 146
Query: 231 SGFVNSGDLS--------SARQLFEKIPNPNAVSWVTMLCG-----FARHGKITEARRLF 277
F +G L +L + N +S L +++ GK+ +A LF
Sbjct: 147 DKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF 206
Query: 278 DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTT----------IIN--- 324
D ++ VSWN++I+ Y + +E + L KM H+DG++ TT IN
Sbjct: 207 DRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALGSVLKACCINLNE 265
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
G+I G M DI TAL+ + G + EA K+F+ + +++ + +N+M
Sbjct: 266 GFIEKGMAIHCYTAKLGMEF-DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAM 324
Query: 385 IAGFCQSGRM-----DEALDLFRQM------PKKNSVS---------------------- 411
I+GF Q + EA LF M P ++ S
Sbjct: 325 ISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI 384
Query: 412 -----------WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
+ +I YA G + F + +++I SW S+I +QN A
Sbjct: 385 CKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAF 444
Query: 461 KSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMY 520
+ +P++ T G Q+ Y +KSG V + I+MY
Sbjct: 445 DLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMY 504
Query: 521 AKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFI 580
AK G + A QVF ++ D+ +++++IS A +G A EA F+ M + + P+Q F+
Sbjct: 505 AKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFL 564
Query: 581 GMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDV 640
G+L AC H GL QGL F+CM D+ I P +H++CLVDLLGR GRL +A N++
Sbjct: 565 GVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGF 624
Query: 641 KANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
+ + W +LL +CRV+K+ IG+ A RL ELEP + +Y+ L N++ ++G E +
Sbjct: 625 QDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEV 684
Query: 701 RVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAI 747
R LMRD+ K P SWI + NQ F D + I +L +
Sbjct: 685 RELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 220/478 (46%), Gaps = 80/478 (16%)
Query: 76 VFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFS 131
++ K ++ ARQLFD+M +RN++S+N++I+GY E+A +LF + + D F+
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 132 WALMITCYTRKGKLEKARELLE--LVPDKLDTACW--NAVIAGYAKKGQFSDAEKVFNLM 187
+A + + L+ ELL +V + L + N +I Y+K G+ A +F+
Sbjct: 151 YAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK--NVVSWNL----------MVSGFVN 235
+D VS+NS+++GY + G L+ KM N+ ++ L + GF+
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 236 SG---DLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
G +A+ E + V +L +A++G + EA +LF MP KNVV++NAMI
Sbjct: 270 KGMAIHCYTAKLGMEF----DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMI 325
Query: 293 AAYAQ-----DLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMP 343
+ + Q D EA KLF+ M + +++ ++ L+ R+++ +
Sbjct: 326 SGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC 385
Query: 344 CKDIAAETALMSGLIQ----TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD 399
+ ++ + S LI+ G ++ + F S +D W SMI Q+ +++ A D
Sbjct: 386 KNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFD 445
Query: 400 LFRQM------PKKNSVSW---------------------------------NTMISGYA 420
LFRQ+ P++ +VS + IS YA
Sbjct: 446 LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYA 505
Query: 421 QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
++G M A +F ++ ++ +++++I+ Q+ +AL M G KP+Q F
Sbjct: 506 KSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAF 563
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 211/510 (41%), Gaps = 101/510 (19%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYN 71
GE + + + H L + + + VF N I K GK+++A+ +F ++ V++N
Sbjct: 159 GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS 131
S+IS + + G + L KM R+ ++ T G + + ++ F
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALGSVLKACCINLNEGF--------IE 269
Query: 132 WALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKD 191
+ I CYT K +E D A++ YAK G +A K+F+LMP K+
Sbjct: 270 KGMAIHCYTAKLGME------------FDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKN 317
Query: 192 LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
+V+YN+M++G+ Q E E + ++ L + R+ E P+
Sbjct: 318 VVTYNAMISGFLQMD---------EITDEASSEAFKLF---------MDMQRRGLE--PS 357
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN-----AMIAAYAQDLQIDEAVK 306
P+ S V C A K E R ++ CKN + A+I YA ++ ++
Sbjct: 358 PSTFSVVLKACSAA---KTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQ 414
Query: 307 LFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM-----------------PCKDIAA 349
F +D SWT++I+ +++ +L+ A +++ Q+ C D A
Sbjct: 415 CFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA- 473
Query: 350 ETALMSG-LIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN 408
AL SG IQ + F + T S I+ + +SG M A +F ++ +
Sbjct: 474 --ALSSGEQIQGYAIKSGIDAFTSVKT-------SSISMYAKSGNMPLANQVFIEVQNPD 524
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFL----------QNSLYFD 458
+++ MIS AQ G + A NIF++M+ I G L Q YF
Sbjct: 525 VATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQ 584
Query: 459 ALKS--------------LVLMGREGKKPD 474
+K+ + L+GR G+ D
Sbjct: 585 CMKNDYRINPNEKHFTCLVDLLGRTGRLSD 614
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
+G H +++KS L++ N L+ MY KC + A Q+F + ++IS+NSLISGY
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
G+ +A + F + + D+ T+ G L C LDL + + + L+
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE----RCDLDLGELLHGLVVVNGLS 180
Query: 613 EHY---SCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACRV 656
+ + L+D+ + G+L++A ++ D + W SL+ G RV
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS-WNSLISGYVRV 227
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 250/429 (58%), Gaps = 13/429 (3%)
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
+IN Y++ L++A ++++QMP +++ + T ++S + ++ + + L RD +
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC-KIHQKALELLVLMLRDNVR 159
Query: 381 WN----SMIAGFCQSGRMDEAL---DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ 433
N S + C +G D + + ++ + + + +I +A+ G+ + A ++F
Sbjct: 160 PNVYTYSSVLRSC-NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
M + + WNS+I GF QNS AL+ M R G +Q+T ++
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G Q H +I+K Y DL ++NAL+ MY KCG +E A +VF ++ D+I+W+++ISG A
Sbjct: 279 GMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
NGY+ EA K F++M S P+ +T +G+L ACSHAGL G F+ M + + I+P+ E
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSEL 673
HY C++DLLG+ G+L++A ++ M+ + +A W +LLGACRV +N+ + E+AA ++ L
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456
Query: 674 EPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSG 733
+P +A Y LSN++A + +W+ VE +R MRD+ K PGCSWIEV QI F+ D+
Sbjct: 457 DPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNS 516
Query: 734 RLRPETIQI 742
P+ +++
Sbjct: 517 --HPQIVEV 523
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 195/404 (48%), Gaps = 45/404 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N +I+++ K ++DA QLFD+M QRN++SW TMI+ Y + ++A +L V+ RDN
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL-VLMLRDN- 157
Query: 131 SWALMITCYTRKGKLEKARELLE-------LVPDKLDTACW--NAVIAGYAKKGQFSDAE 181
+ YT L + + ++ + L++ + +A+I +AK G+ DA
Sbjct: 158 ---VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD--- 238
VF+ M D + +NS++ G+ QN + +AL F++M ++ ++ + +
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 239 -LSSARQLFEKIPNPNAV-----SWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
L Q I + + V M C + G + +A R+F+ M ++V++W+ MI
Sbjct: 275 LLELGMQAHVHIVKYDQDLILNNALVDMYC---KCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 293 AAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGKLDEA-------REVYNQ 341
+ AQ+ EA+KLF +M + ++ ++ G L++ +++Y
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQSGR----MDE 396
P ++ ++ L + G++D+A K+ N++ D + W +++ G C+ R +
Sbjct: 392 DPVREHYG--CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL-GACRVQRNMVLAEY 448
Query: 397 ALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
A + +++ ++ + + YA + + DS E I M +R I
Sbjct: 449 AAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 19/277 (6%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
N +I+ Y + ++ A +F M +RN++SW ++I+ + + ++ AL+ LVLM R+ +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P+ T+ ++ LH I+K G +D+FV +ALI ++AK G E A V
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F + D I WNS+I G+A N + A + FK+M + +Q T +L AC+ L
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 593 NQGLDLFKCMV---EDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
G+ +V +D + + LVD+ + G LE+A V M + + W +
Sbjct: 277 ELGMQAHVHIVKYDQDLILN------NALVDMYCKCGSLEDALRVFNQMKER-DVITWST 329
Query: 650 LLG--ACRVHKNLEIGEFAAMRLSELEPHNASNYITL 684
++ A + + F M+ S +P NYIT+
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKP----NYITI 362
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 156/351 (44%), Gaps = 30/351 (8%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ + ++ +++I VFAK G+ DA +FD+M + + WN++I G+ NS + A
Sbjct: 185 IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 244
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKAREL-----LELVPDKLDTACWNAVIAGYA 172
+LF M + +T R EL + +V D NA++ Y
Sbjct: 245 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYC 304
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
K G DA +VFN M +D++++++M++G QNG AL FE+M + + G
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVG 364
Query: 233 FV----NSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
+ ++G L F + +P + M+ + GK+ +A +L + M C+
Sbjct: 365 VLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE 424
Query: 284 -NVVSWNAMIAA--YAQDLQIDE-AVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVY 339
+ V+W ++ A +++ + E A K I + +D ++T + N Y K D E+
Sbjct: 425 PDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIR 484
Query: 340 NQMPCKDIAAET------------ALMSGLIQTGRVDEASKMFNQLSTRDT 378
+M + I E A + G ++ E SK NQL R T
Sbjct: 485 TRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLT 535
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
A+K++ + G D +T+ GN + ++ +G+ +F+ N LI
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 519 MYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
MY K + A Q+F + ++ISW ++IS Y+ +A + ML + V P+ T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 579 FIGMLSACS--------HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
+ +L +C+ H G+ +GL+ D + S L+D+ ++G E+
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLE------SDVFVR------SALIDVFAKLGEPED 212
Query: 631 AFNVVRGMDVKANAGLWGSLLGA 653
A +V M V +A +W S++G
Sbjct: 213 ALSVFDEM-VTGDAIVWNSIIGG 234
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 38/192 (19%)
Query: 26 LTIGSIGGKHVFNKNQQII-------HLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFA 78
L +G H+ +Q +I K G +E+A+RVF+ ++++T+++MIS A
Sbjct: 276 LELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 79 KNGKISDARQLFDKMSQRNLVSWNTMIAGYL----HNSMVEEA-------SKLFDVMPER 127
+NG +A +LF++M I G L H ++E+ KL+ + P R
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW-----------NAVIAGYAKKGQ 176
+++ MI + GKL+ A +LL + + D W N V+A YA
Sbjct: 396 EHY--GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA---- 449
Query: 177 FSDAEKVFNLMP 188
A+KV L P
Sbjct: 450 ---AKKVIALDP 458
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 249/465 (53%), Gaps = 39/465 (8%)
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP-HKDGV 317
+++ + + G + AR++FD MP +NV +WNAMI Y + A LF ++ ++ V
Sbjct: 86 SLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTV 145
Query: 318 SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRD 377
+W +I GY + ++++ARE++ +MP ++
Sbjct: 146 TWIEMIKGYGKRIEIEKARELFERMP-----------------------------FELKN 176
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
W+ M+ + + +M++A F +P+KN+ W+ M+SGY + G + A IF +
Sbjct: 177 VKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA 236
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
R++V WN+LI G+ QN DA+ + M EG +PD T VG ++
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYA 557
H I G + FVSNALI MYAKCG +E+A VF +I + NS+IS A++G
Sbjct: 297 HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKG 356
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM-VEDFAIEPLAEHYS 616
EA + F M S ++ PD++TFI +L+AC H G +GL +F M +D ++P +H+
Sbjct: 357 KEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQD--VKPNVKHFG 414
Query: 617 CLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPH 676
CL+ LLGR G+L+EA+ +V+ M VK N + G+LLGAC+VH + E+ E M++ E
Sbjct: 415 CLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE-QVMKIIETAGS 473
Query: 677 NASNY-----ITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
++Y ++SN++A RW+ E LRV M + K PG S
Sbjct: 474 ITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 211/434 (48%), Gaps = 44/434 (10%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV-KDLV 193
+I+ Y + G + AR++ + +P++ + A WNA+I GY G A +F + V ++ V
Sbjct: 87 LISMYGKCGCVVSARKVFDEMPER-NVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTV 145
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMA--EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
++ M+ GY + ++ A FE+M KNV +W++M+ +VN+ + AR+ FE IP
Sbjct: 146 TWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPE 205
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
NA W M+ G+ R G + EAR +F + +++V WN +IA YAQ+ D+A+ F M
Sbjct: 206 KNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNM 265
Query: 312 P----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA----AETALMSGLIQTGRV 363
D V+ ++I++ + G+LD REV++ + + I AL+ + G +
Sbjct: 266 QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDL 325
Query: 364 DEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGY 419
+ A+ +F +S R C NSMI+ G+ EAL++F M K + +++ +++
Sbjct: 326 ENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 385
Query: 420 AQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-------- 471
G + IF M+ +++ N +F L + L+GR GK
Sbjct: 386 VHGGFLMEGLKIFSEMKTQDVKP----------NVKHFGCL--IHLLGRSGKLKEAYRLV 433
Query: 472 -----KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA---MYAKC 523
KP+ + ++ Q+ + I +G I + + N L + +YA
Sbjct: 434 KEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHT 493
Query: 524 GRVESAEQVFTAIE 537
R ++AE + +E
Sbjct: 494 ERWQTAEALRVEME 507
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 167/299 (55%), Gaps = 11/299 (3%)
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
D++ +S+++ Y + G + A F++M E+NV +WN M+ G++++GD A LFE+I
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS 139
Query: 251 -NPNAVSWVTMLCGFARHGKITEARRLFDSMP--CKNVVSWNAMIAAYAQDLQIDEAVKL 307
N V+W+ M+ G+ + +I +AR LF+ MP KNV +W+ M+ Y + ++++A K
Sbjct: 140 VCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKF 199
Query: 308 FIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEAS 367
F +P K+ W+ +++GY R+G + EAR ++ ++ +D+ L++G Q G D+A
Sbjct: 200 FEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAI 259
Query: 368 KMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGY 419
F + D + +S+++ QSGR+D ++ + + N N +I Y
Sbjct: 260 DAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMY 319
Query: 420 AQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
A+ G +++A ++F+++ R++ NS+I+ + +AL+ M KPD+ TF
Sbjct: 320 AKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 196/386 (50%), Gaps = 21/386 (5%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPERDN 129
+S+IS++ K G + AR++FD+M +RN+ +WN MI GY+ N AS LF ++ R+
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNT 144
Query: 130 FSWALMITCYTRKGKLEKARELLELVPDKL-DTACWNAVIAGYAKKGQFSDAEKVFNLMP 188
+W MI Y ++ ++EKAREL E +P +L + W+ ++ Y + DA K F +P
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIP 204
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
K+ ++ M++GY + G + A F ++ +++V WN +++G+ +G A F
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 249 IPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV-----VSWNAMIAAYAQDL 299
+ P+AV+ ++L A+ G++ R + + + + VS NA+I YA+
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVS-NALIDMYAKCG 323
Query: 300 QIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMS 355
++ A +F + + ++I+ GK EA E+++ M D+ + A+++
Sbjct: 324 DLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLT 383
Query: 356 GLIQTGRVDEASKMFNQLSTRDTIC----WNSMIAGFCQSGRMDEALDLFRQMP-KKNSV 410
+ G + E K+F+++ T+D + +I +SG++ EA L ++M K N
Sbjct: 384 ACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDT 443
Query: 411 SWNTMISGYAQAGQMDSAENIFQAME 436
++ + AE + + +E
Sbjct: 444 VLGALLGACKVHMDTEMAEQVMKIIE 469
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 209/424 (49%), Gaps = 34/424 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ-RNLVSWNTMI 105
GK G V A +VF +N+ T+N+MI + NG A LF+++S RN V+W MI
Sbjct: 92 GKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMI 151
Query: 106 AGYLHNSMVEEASKLFDVMP-ERDNF-SWALMITCYTRKGKLEKARELLELVPDKLDTAC 163
GY +E+A +LF+ MP E N +W++M+ Y K+E AR+ E +P+K +
Sbjct: 152 KGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEK-NAFV 210
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA---- 219
W+ +++GY + G +A +F + +DLV +N+++AGY QNG A+ F M
Sbjct: 211 WSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGY 270
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKITEARR 275
E + V+ + ++S SG L R++ I + N ++ +A+ G + A
Sbjct: 271 EPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATS 330
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGK 331
+F+S+ ++V N+MI+ A + EA+++F M D +++ ++ + G
Sbjct: 331 VFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGF 390
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAG 387
L E +++++M +D+ LI ++G++ EA ++ ++ + + G
Sbjct: 391 LMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLG 450
Query: 388 FCQSGRMDEALDLFRQMPK--------KNSVSWNTMIS---GYAQAGQMDSAENIFQAME 436
C+ MD ++ Q+ K NS S N + S YA + +AE + ME
Sbjct: 451 ACKV-HMDT--EMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEME 507
Query: 437 ERNI 440
+R +
Sbjct: 508 KRGL 511
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
+G LH +K G +D+ V ++LI+MY KCG V SA +VF + ++ +WN++I GY
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
NG A+ A F+++ V + VT+I M+
Sbjct: 124 SNGDAVLASGLFEEI---SVCRNTVTWIEMI 151
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 209/743 (28%), Positives = 353/743 (47%), Gaps = 91/743 (12%)
Query: 86 ARQLFDKMSQRN-LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSW-----ALMITCY 139
A +LFD SQRN S N I+ L + A +F + F L +
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 140 TRKGKLEKARELLELVPDKLDTA---CWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN 196
+G L++ ++ T+ NAV+ Y K G+F +A +F + D+VS+N
Sbjct: 87 ACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWN 146
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIPNP 252
++L+G+ N +AL+F +M VV +++ +S V S QL +
Sbjct: 147 TILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKT 203
Query: 253 N-------AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQID-EA 304
S++TM ++R G ARR+FD M K+++SWN++++ +Q+ EA
Sbjct: 204 GLESDLVVGNSFITM---YSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 305 VKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET------ALM 354
V +F M + D VS+T++I L AR+++ C E+ LM
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGL--CIKRGYESLLEVGNILM 318
Query: 355 SGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSV 410
S + G ++ +F+Q+S R+ + W +MI S D+A+ +F M N V
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEV 373
Query: 411 SW-----------------------------------NTMISGYAQAGQMDSAENIFQAM 435
++ N+ I+ YA+ ++ A+ F+ +
Sbjct: 374 TFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 436 EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV-- 493
R I+SWN++I+GF QN +ALK + E P++ TF V
Sbjct: 434 TFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQ 492
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G + H ++LK G + VS+AL+ MYAK G ++ +E+VF + + W S+IS Y+
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
+G F +M+ E V PD VTF+ +L+AC+ G+ ++G ++F M+E + +EP E
Sbjct: 553 HGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE 612
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSEL 673
HYSC+VD+LGR GRL+EA ++ + + S+LG+CR+H N+++G A E+
Sbjct: 613 HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEM 672
Query: 674 EPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQN-----QIQCFL 728
+P + +Y+ + N++AE W++ +R MR K K G SWI+V + +Q F
Sbjct: 673 KPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFS 732
Query: 729 SDDSGRLRPETIQIILNAISAHM 751
S D + + I ++ I M
Sbjct: 733 SGDKSHPKSDEIYRMVEIIGLEM 755
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 242/536 (45%), Gaps = 83/536 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSM-------VEEASKLFDV 123
N+++ ++ K G+ +A +F+ + ++VSWNT+++G+ N + ++ A +FD
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDA 174
Query: 124 MPERDNFSWALMITCYTRKGKLEKARELLELVPDKL--DTACWNAVIAGYAKKGQFSDAE 181
+S AL C +G L + +V L D N+ I Y++ G F A
Sbjct: 175 F----TYSTALSF-CVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGAR 229
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGL-ALHFFEKMAEKNV----VSWNLMVSGFVNS 236
+VF+ M KD++S+NS+L+G +Q G G A+ F M + V VS+ +++ +
Sbjct: 230 RVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
Query: 237 GDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
DL ARQ+ S + ++ +++ G + + +F M +NVVSW MI
Sbjct: 290 TDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI 349
Query: 293 AAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA 348
++ D+AV +F+ M + + V++ +IN ++ E +++
Sbjct: 350 SS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFV 404
Query: 349 AETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF--- 401
+E ++ + I + +++A K F ++ R+ I WN+MI+GF Q+G EAL +F
Sbjct: 405 SEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA 464
Query: 402 --RQMPKK-------NSVSW----------------------------NTMISGYAQAGQ 424
MP + N++++ + ++ YA+ G
Sbjct: 465 AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGN 524
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX 484
+D +E +F M ++N W S+I+ + + + + M +E PD TF
Sbjct: 525 IDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTA 584
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSN----ALIAMYAKCGRVESAEQVFTAI 536
G ++ +++ + +L S+ ++ M + GR++ AE++ + +
Sbjct: 585 CNRKGMVDKGYEIFNMMIE---VYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 209/422 (49%), Gaps = 60/422 (14%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVE-E 116
V + +LV NS I++++++G AR++FD+MS ++++SWN++++G E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 117 ASKLF-DVMP---ERDNFSWALMITCYTRKGKLEKARELLELVPDK-----LDTACWNAV 167
A +F D+M E D+ S+ +IT + L+ AR++ L + L+ N +
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG--NIL 317
Query: 168 IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWN 227
++ Y+K G + VF+ M +++VS+ +M++ + A+ F M V
Sbjct: 318 MSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIFLNMRFDGVYPNE 372
Query: 228 LMVSGFVNSGDLSSARQLFEK------------IPNPN-AVSWVTMLCGFARHGKITEAR 274
+ G +N+ + Q+ E + P+ S++T+ +A+ + +A+
Sbjct: 373 VTFVGLINA--VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL---YAKFEALEDAK 427
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK-----MPHKDGVSWTTIINGY--- 326
+ F+ + + ++SWNAMI+ +AQ+ EA+K+F+ MP++ ++ +++N
Sbjct: 428 KAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNE--YTFGSVLNAIAFA 485
Query: 327 ----IRVGKLDEAREV---YNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
++ G+ A + N P +AL+ + G +DE+ K+FN++S ++
Sbjct: 486 EDISVKQGQRCHAHLLKLGLNSCP----VVSSALLDMYAKRGNIDESEKVFNEMSQKNQF 541
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAM 435
W S+I+ + G + ++LF +M K+N V++ ++++ + G +D IF M
Sbjct: 542 VWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMM 601
Query: 436 EE 437
E
Sbjct: 602 IE 603
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 152/333 (45%), Gaps = 35/333 (10%)
Query: 51 KVEEAVRVFSNTIHKNLVTY----NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
+++E +++ I V+ NS I+++AK + DA++ F+ ++ R ++SWN MI+
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMIS 446
Query: 107 GYLHNSMVEEASKLF-----DVMPERDNFSWALMITCYTRKGKLEKAR----ELLELVPD 157
G+ N EA K+F + MP F L + +++ + LL+L +
Sbjct: 447 GFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLN 506
Query: 158 KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
+A++ YAK+G ++EKVFN M K+ + S+++ Y+ +G ++ F K
Sbjct: 507 SCPVVS-SALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHK 565
Query: 218 MAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHG 268
M ++NV V++ +++ G + ++F + P+ + M+ R G
Sbjct: 566 MIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAG 625
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM--------PHKDGVSWT 320
++ EA L +P +M+ + ++ VK+ K+ P G S+
Sbjct: 626 RLKEAEELMSEVPGG---PGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG-SYV 681
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
+ N Y + D+A E+ M K+++ E
Sbjct: 682 QMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGF 714
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/501 (21%), Positives = 208/501 (41%), Gaps = 105/501 (20%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKIS-DARQLFDKMSQRNL 98
N I + G A RVF K+++++NS++S ++ G +A +F M + +
Sbjct: 213 NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV 272
Query: 99 ----VSWNTMIAGYLHNS-----------------------------------MVEEASK 119
VS+ ++I H + ++E
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 120 LFDVMPERDNFSWALMITC---------------------YTRKGKL------EKARELL 152
+F M ER+ SW MI+ T G + E+ +E L
Sbjct: 333 VFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGL 392
Query: 153 ELVPDKLDT------ACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNG 206
++ + T + N+ I YAK DA+K F + ++++S+N+M++G+ QNG
Sbjct: 393 KIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNG 452
Query: 207 KMGLALHFFEKMAEK---NVVSWNLMVSGFVNSGDLSSAR------QLFEKIPNPNAVSW 257
AL F A + N ++ +++ + D+S + L + N V
Sbjct: 453 FSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS 512
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK--- 314
+L +A+ G I E+ ++F+ M KN W ++I+AY+ + + LF KM +
Sbjct: 513 SALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVA 572
Query: 315 -DGVSWTTIINGYIRVGKLDEAREVYNQM-------PCKDIAAETALMSGLIQTGRVDEA 366
D V++ +++ R G +D+ E++N M P + + ++ L + GR+ EA
Sbjct: 573 PDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE--HYSCMVDMLGRAGRLKEA 630
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMD-------EALDLFRQMPKKNSVSWNTMISGY 419
++ +++ SM+ S R+ + +L +M + S S+ M + Y
Sbjct: 631 EELMSEVPGGPG---ESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIY 687
Query: 420 AQAGQMDSAENIFQAMEERNI 440
A+ + D A I +AM ++N+
Sbjct: 688 AEKEEWDKAAEIRKAMRKKNV 708
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRN----LVSWNT 103
K G ++E+ +VF+ KN + S+IS ++ +G LF KM + N LV++ +
Sbjct: 521 KRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLS 580
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELVPDK 158
++ MV++ ++F++M E N ++ M+ R G+L++A EL+ VP
Sbjct: 581 VLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGG 640
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNL-MPVKDLV--SYNSMLAGYTQNGKMGLALHFF 215
+ +++ G KV L M +K + SY M Y + + A
Sbjct: 641 PGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIR 700
Query: 216 EKMAEKNV-----VSW--------NLMVSGFVNSGDLSSAR 243
+ M +KNV SW +L + GF +SGD S +
Sbjct: 701 KAMRKKNVSKEAGFSWIDVGDTEGSLTMQGF-SSGDKSHPK 740
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/624 (27%), Positives = 283/624 (45%), Gaps = 93/624 (14%)
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKI------PNPNAVSWVTMLCGFARHGKITEAR- 274
+V +WNL + VN D + LF ++ PN +V C AR +
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKAC--ARLADVGCCEM 73
Query: 275 ---RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGK 331
L S +V A + + + +D A K+F +MP +D +W +++G+ + G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQT------------------------------- 360
D+A ++ +M +I ++ + LIQ+
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 361 --------GRVDEASKMFNQLS--TRDTICWNSMIAGFCQSGRMDEALDLFRQMPK---- 406
G +D A +F + R + WNSM + G +A L+ M +
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 407 -----------------------------------KNSVSWNTMISGYAQAGQMDSAENI 431
++ + NT IS Y+++ SA +
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
F M R VSW +I+G+ + +AL M + G+KPD T
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373
Query: 492 QVGNQLHEYILKSGYIND-LFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISG 550
+ G + G D + + NALI MY+KCG + A +F +++W ++I+G
Sbjct: 374 ETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAG 433
Query: 551 YALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEP 610
YALNG +EA K F +M+ + P+ +TF+ +L AC+H+G +G + F M + + I P
Sbjct: 434 YALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISP 493
Query: 611 LAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRL 670
+HYSC+VDLLGR G+LEEA ++R M K +AG+WG+LL AC++H+N++I E AA L
Sbjct: 494 GLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESL 553
Query: 671 SELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSD 730
LEP A+ Y+ ++N++A AG W+ R+R +M+ + K PG S I+V + F
Sbjct: 554 FNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVG 613
Query: 731 DSGRLRPETIQIILNAISAHMRDK 754
+ G + E I LN +S +DK
Sbjct: 614 EHGHVENEVIYFTLNGLSLFAKDK 637
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 192/434 (44%), Gaps = 47/434 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
+ + +F K + A ++F++M +R+ +WN M++G+ + ++A LF M +
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 131 SWALMITCYTRKGKLEKARELLELVPD-------KLDTACWNAVIAGYAKKGQFSDAEKV 183
++ + + EK+ +LLE + + N I+ Y K G A+ V
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 184 FNLMPVKD--LVSYNSMLAGYTQNGK----MGLALHFFEKMAEKNVVSWNLMVSGFVNSG 237
F + D +VS+NSM Y+ G+ GL + + ++ ++ + + N
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 238 DLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIA 293
L+ R + + + + T + +++ AR LFD M + VSW MI+
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 294 AYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGKLDEAR------EVYNQMP 343
YA+ +DEA+ LF M D V+ ++I+G + G L+ + ++Y
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG--- 387
Query: 344 CK--DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
CK ++ AL+ + G + EA +F+ + + W +MIAG+ +G EAL LF
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 402 RQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
+M K N +++ ++ A +G ++ F M++ +S G S
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS-----PGLDHYSCMV 502
Query: 458 DALKSLVLMGREGK 471
D L+GR+GK
Sbjct: 503 D------LLGRKGK 510
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/528 (22%), Positives = 214/528 (40%), Gaps = 117/528 (22%)
Query: 22 MKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG 81
M H I S VF + K V+ A +VF ++ T+N+M+S F ++G
Sbjct: 73 MVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 82 KISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------------DVMPERDN 129
A LF +M + + + + ++ E++ KL DV N
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 130 FSWALMITCYTRKGKLEKARELLELVPDKLD--TACWNAVIAGYAKKGQFSDAEKVFNLM 187
+W I+ Y + G L+ A+ + E + D+ D WN++ Y+ G+ DA ++ LM
Sbjct: 193 -TW---ISTYGKCGDLDSAKLVFEAI-DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 188 ---------------------------------------PVKDLVSYNSMLAGYTQNGKM 208
+D+ + N+ ++ Y+++
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 209 GLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCG- 263
A F+ M + VSW +M+SG+ GD+ A LF + P+ V+ ++++ G
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 264 -----------------------------------FARHGKITEARRLFDSMPCKNVVSW 288
+++ G I EAR +FD+ P K VV+W
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMPHKD----GVSWTTIINGYIRVGKLDEA-------RE 337
MIA YA + EA+KLF KM D +++ ++ G L++ ++
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 338 VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQSGR--- 393
VYN P D + ++ L + G+++EA ++ +S + D W +++ C+ R
Sbjct: 488 VYNISPGLD--HYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA-CKIHRNVK 544
Query: 394 -MDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
++A + + + + + M + YA AG D I M++RNI
Sbjct: 545 IAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNI 592
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 188/461 (40%), Gaps = 73/461 (15%)
Query: 87 RQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTR- 141
R+L+ ++ +WN I ++ + E+ LF M E +NF++ + R
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 142 --KGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
G E L P D A + + K A KVF MP +D ++N+ML
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE-----------K 248
+G+ Q+G A F +M + ++ V + S + +L E
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 249 IPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC--KNVVSWNAMIAAYAQDLQIDEAVK 306
+ A +W++ + + G + A+ +F+++ + VVSWN+M AY+ + +A
Sbjct: 186 VQVTVANTWIST---YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFG 242
Query: 307 LFIKMPHKD-GVSWTTIIN--------GYIRVGKLDEAREVYNQMPCKDIAAETALMSGL 357
L+ M ++ +T IN + G+L + ++ +DI A +S
Sbjct: 243 LYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD-QDIEAINTFISMY 301
Query: 358 IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK---------- 407
++ A +F+ +++R + W MI+G+ + G MDEAL LF M K
Sbjct: 302 SKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLL 361
Query: 408 ------------------------------NSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
N + N +I Y++ G + A +IF E
Sbjct: 362 SLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE 421
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ +V+W ++I G+ N ++ +ALK M KP+ TF
Sbjct: 422 KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITF 462
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 147/324 (45%), Gaps = 28/324 (8%)
Query: 58 VFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSM 113
+ S+ IH +++ N+ IS+++K+ AR LFD M+ R VSW MI+GY
Sbjct: 278 IHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGD 337
Query: 114 VEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKAREL---LELVPDKLDTA-CWN 165
++EA LF M + D + +I+ + G LE + + ++ K D N
Sbjct: 338 MDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICN 397
Query: 166 AVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----K 221
A+I Y+K G +A +F+ P K +V++ +M+AGY NG AL F KM +
Sbjct: 398 ALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKP 457
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRL 276
N +++ ++ +SG L + F + +P + M+ R GK+ EA L
Sbjct: 458 NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 517
Query: 277 FDSMPCK-NVVSWNAMIAA--YAQDLQI-DEAVKLFIKMPHKDGVSWTTIINGYIRVGKL 332
+M K + W A++ A ++++I ++A + + + + + N Y G
Sbjct: 518 IRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMW 577
Query: 333 D---EAREVYNQMPCKDIAAETAL 353
D R + Q K E+ +
Sbjct: 578 DGFARIRSIMKQRNIKKYPGESVI 601
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 270/530 (50%), Gaps = 45/530 (8%)
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD--GVSWTTIINGY 326
++ +AR++FD MP K+ + WN MI+ Y ++ E++++F + ++ + TT+++
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 327 IRVGKLDEAR---EVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTI 379
V +L E R ++++ + +++G I + G++ S +F + D +
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIV 288
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQM----------------P----------------KK 407
+N+MI G+ +G + +L LF+++ P K
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKS 348
Query: 408 NSVSW----NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
N +S + + Y++ +++SA +F E+++ SWN++I+G+ QN L DA+
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC 523
M + P+ T +G +H+ + + + + ++VS ALI MYAKC
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
G + A ++F + + ++WN++ISGY L+G EA F +ML+ + P VTF+ +L
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
ACSHAGL +G ++F M+ + EP +HY+C+VD+LGR G L+ A + M ++
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
+ +W +LLGACR+HK+ + + +L EL+P N ++ LSN+H+ + + +R
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQT 648
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
+ ++ K PG + IE+ F S D + + I L + MR+
Sbjct: 649 AKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMRE 698
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 203/397 (51%), Gaps = 25/397 (6%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMP 125
L+ ++++ ++ K ++ DAR++FD+M +++ + WNTMI+GY N M E+ ++F D++
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 126 ER-DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWN------AVIAGYAKKGQFS 178
E ++ +L++ R +++ T C++ I+ Y+K G+
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF-EKMAEKNVVSWNLMVSGFVNSG 237
+F D+V+YN+M+ GYT NG+ L+L F E M + + +VS SG
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 238 DLSSARQLFEKIPNPNAVSWVTMLCG----FARHGKITEARRLFDSMPCKNVVSWNAMIA 293
L + N +S ++ +++ +I AR+LFD P K++ SWNAMI+
Sbjct: 334 HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 294 AYAQDLQIDEAVKLFIKMPHKD----GVSWTTIINGYIRVGKLDEAREVYNQMPCKD--- 346
Y Q+ ++A+ LF +M + V+ T I++ ++G L + V++ + D
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 347 -IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM- 404
I TAL+ + G + EA ++F+ ++ ++ + WN+MI+G+ G+ EAL++F +M
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513
Query: 405 ---PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
V++ ++ + AG + + IF +M R
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 41/274 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
++ +V++K +I AR+LFD+ +++L SWN MI+GY N + E+A LF M + +
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS 417
Query: 131 SWALMITCY----TRKGKLEKARELLELV-PDKLDTACW--NAVIAGYAKKGQFSDAEKV 183
+ ITC + G L + + +LV +++ + A+I YAK G ++A ++
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSAR 243
F+LM K+ V++N+M++GY +G+ AL+ F +M +NSG
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM---------------LNSG------ 516
Query: 244 QLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQD 298
P V+++ +L + G + E +F+SM + +V + M+ +
Sbjct: 517 ------ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 299 LQIDEAVKLFIKMPHKDGVS-WTTIINGYIRVGK 331
+ A++ M + G S W T++ G R+ K
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLL-GACRIHK 603
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 23/256 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNT 103
KL ++E A ++F + K+L ++N+MIS + +NG DA LF +M + N V+
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 425
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDN----FSWALMITCYTRKGKLEKARELLELVPDKL 159
+++ + + D++ D + +I Y + G + +AR L +L+ K
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK- 484
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLM--------PVKDL-VSYNSMLAGYTQNGKMGL 210
+ WN +I+GY GQ +A +F M PV L V Y AG + G
Sbjct: 485 NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIF 544
Query: 211 ALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTMLCGFARHGK 269
E +V + MV +G L A Q E + P + W T+L H
Sbjct: 545 NSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKD 604
Query: 270 ITEAR----RLFDSMP 281
AR +LF+ P
Sbjct: 605 TNLARTVSEKLFELDP 620
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 233/445 (52%), Gaps = 31/445 (6%)
Query: 315 DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL- 373
D V T++N Y + G L+EAR+V+ +MP +D T L+SG Q R +A FNQ+
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 374 ------------------STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTM 415
+ C + GFC D N + +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS-----------NVHVGSAL 202
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
+ Y + G MD A+ +F A+E RN VSWN+LI G + S AL+ M R+G +P
Sbjct: 203 LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA 535
++ + G +H Y++KSG F N L+ MYAK G + A ++F
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 536 IECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQG 595
+ D++SWNSL++ YA +G+ EA F++M + P++++F+ +L+ACSH+GL ++G
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Query: 596 LDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACR 655
++ M +D I P A HY +VDLLGR G L A + M ++ A +W +LL ACR
Sbjct: 383 WHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441
Query: 656 VHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGC 715
+HKN E+G +AA + EL+P + ++ L N++A GRW + R+R M++ K P C
Sbjct: 442 MHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPAC 501
Query: 716 SWIEVQNQIQCFLSDDSGRLRPETI 740
SW+E++N I F+++D + E I
Sbjct: 502 SWVEIENAIHMFVANDERHPQREEI 526
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 168/357 (47%), Gaps = 61/357 (17%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
G++ A + + ++V N++++++AK G + +AR++F+KM QR+ V+W T+I+GY
Sbjct: 79 GRIVHA-HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 110 HNSMVEEASKLFDVM------PERDNFSWAL----------------------------- 134
+ +A F+ M P S +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 135 ----MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK 190
++ YTR G ++ A+ + + + + D + WNA+IAG+A++ A ++F M ++
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAGHARRSGTEKALELFQGM-LR 255
Query: 191 D-----LVSYNSMLAGYTQNG--KMGLALH-FFEKMAEKNVV-SWNLMVSGFVNSGDLSS 241
D SY S+ + G + G +H + K EK V + N ++ + SG +
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 315
Query: 242 ARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQ 297
AR++F+++ + VSW ++L +A+HG EA F+ M N +S+ +++ A +
Sbjct: 316 ARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSH 375
Query: 298 DLQIDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
+DE + ++ KDG+ + T+++ R G L+ A +MP + AA
Sbjct: 376 SGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G +H +IL+S + +D+ + N L+ MYAKCG +E A +VF + D ++W +LISGY+
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGML--SACSHAGLANQGLDLF--KCMVEDFAIE 609
+ +A F QML P++ T ++ +A G L F KC +
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC-----GFD 193
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACR---VHKNLEIGEF 665
S L+DL R G +++A V ++ + + W +L+ G R K LE+ F
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAGHARRSGTEKALEL--F 250
Query: 666 AAMRLSELEPHNASNYITL-----SNMHAEAGRW 694
M P + S Y +L S E G+W
Sbjct: 251 QGMLRDGFRPSHFS-YASLFGACSSTGFLEQGKW 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 106/210 (50%), Gaps = 24/210 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE---R 127
N+++ ++AK+G I DAR++FD++++R++VSWN+++ Y + +EA F+ M R
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 128 DN-FSWALMITCYTRKGKLEKARELLELV-PDKLDTACWN--AVIAGYAKKGQFSDAEKV 183
N S+ ++T + G L++ EL+ D + W+ V+ + G + A +
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 184 FNLMPVKDLVS-YNSMLAG--YTQNGKMG--LALHFFEKMAE---KNVVSWNLMVSGFVN 235
MP++ + + ++L +N ++G A H FE + +V+ +N+ SG
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG--- 477
Query: 236 SGDLSSARQLFEK-----IPNPNAVSWVTM 260
G + A ++ +K + A SWV +
Sbjct: 478 -GRWNDAARVRKKMKESGVKKEPACSWVEI 506
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS-- 94
F N + K G + +A ++F +++V++NS+++ +A++G +A F++M
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 95 --QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKA 148
+ N +S+ +++ H+ +++E +++M + + + + ++ R G L +A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 149 RELLELVPDKLDTACWNAVIAGY-----AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
+E +P + A W A++ + G ++ AE VF L P D + + Y
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA-AEHVFELDP-DDPGPHVILYNIYA 475
Query: 204 QNGKMGLALHFFEKMAEKNV 223
G+ A +KM E V
Sbjct: 476 SGGRWNDAARVRKKMKESGV 495
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 271/535 (50%), Gaps = 41/535 (7%)
Query: 238 DLSSARQLFEK---IPNPNAVSWVTMLCGFA--RHGKITEARRLFDSMPCKNVVSWNAMI 292
DLS +F K + + A + + C + H + A ++F+ MP +N SWN +I
Sbjct: 38 DLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTII 97
Query: 293 AAYAQDLQIDE-----AVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQM 342
+++ DE A+ LF +M + V ++ +++ + GK+ E ++++
Sbjct: 98 RGFSES---DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 343 PCKDIAAETALMSGLIQ----TGRVDEASKMF-NQLSTRDTICWNSMIAGFCQSGRMDEA 397
+ +MS L++ G + +A +F + +D +
Sbjct: 155 LKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD-------------- 200
Query: 398 LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
R+ V WN MI GY + G +A +F M +R++VSWN++I+G+ N +
Sbjct: 201 ----RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFK 256
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
DA++ M + +P+ T ++G LH Y SG D + +ALI
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALI 316
Query: 518 AMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
MY+KCG +E A VF + ++I+W+++I+G+A++G A +A F +M V P V
Sbjct: 317 DMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV 376
Query: 578 TFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRG 637
+I +L+ACSH GL +G F MV +EP EHY C+VDLLGR G L+EA +
Sbjct: 377 AYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILN 436
Query: 638 MDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEV 697
M +K + +W +LLGACR+ N+E+G+ A L ++ PH++ Y+ LSNM+A G W EV
Sbjct: 437 MPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 496
Query: 698 ERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
+R+ M++K K PGCS I++ + F+ +D + + I +L IS +R
Sbjct: 497 SEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 186/388 (47%), Gaps = 42/388 (10%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE--ASKLF-----DVMPERDNFSWALMITC 138
A ++F++M QRN SWNT+I G+ + + A LF D E + F++ ++
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 139 YTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVF-------NLMP 188
+ GK+++ +++ L D + ++ Y G DA +F +++
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 189 VKD-------LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
+ D +V +N M+ GY + G A F+KM +++VVSWN M+SG+ +G
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 242 ARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLF----DSMPCKNVVSWNAMIA 293
A ++F ++ PN V+ V++L +R G + L DS + V +A+I
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI----AA 349
Y++ I++A+ +F ++P ++ ++W+ +ING+ G+ +A + + +M + A
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 350 ETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQM 404
L++ G V+E + F+Q+ + D + + M+ +SG +DEA + M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 405 P-KKNSVSWNTMISGYAQAGQMDSAENI 431
P K + V W ++ G ++ + +
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRV 465
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 43/327 (13%)
Query: 67 LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE 126
+V +N MI + + G AR LFDKM QR++VSWNTMI+GY N ++A ++F M +
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 127 ---RDNF-SWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSD 179
R N+ + ++ +R G LE L D ++D +A+I Y+K G
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A VF +P ++++++++M+ G+ +G+ G A+ F KM + V
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV---------------- 371
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC-----KNVVSWNAMIAA 294
P+ V+++ +L + G + E RR F M + + M+
Sbjct: 372 -----------RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDL 420
Query: 295 YAQDLQIDEAVKLFIKMPHK-DGVSWTTIINGYIRVGKLDEAREVYN---QMPCKDIAAE 350
+ +DEA + + MP K D V W ++ G ++ + V N M D A
Sbjct: 421 LGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAY 480
Query: 351 TALMSGLIQTGRVDEASKMFNQLSTRD 377
AL + G E S+M ++ +D
Sbjct: 481 VALSNMYASQGNWSEVSEMRLRMKEKD 507
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/604 (27%), Positives = 293/604 (48%), Gaps = 60/604 (9%)
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEK--- 248
N L +++ K+ A F ++M + V S+ + LS R L ++
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 249 -IPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKL 307
I NP+ + +L + + +A +LFD M N VS MI+AYA+ +D+AV L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 308 FIKM----PHKDGVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQ 359
F M +TT++ + LD R+++ + C + + ET +++ ++
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT----- 414
G + A ++F+Q++ + + ++ G+ Q+GR +AL LF + + V W++
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEWDSFVFSV 290
Query: 415 -----------------------------------MISGYAQAGQMDSAENIFQAMEERN 439
++ Y + +SA FQ + E N
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 440 IVSWNSLITGFLQNSLYFDALKSL-VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
VSW+++I+G+ Q S + +A+K+ L + + T+ +G Q+H
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
+K I + +ALI MY+KCG ++ A +VF +++ D+++W + ISG+A G A
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS 470
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
EA + F++M+S + P+ VTFI +L+ACSHAGL QG M+ + + P +HY C+
Sbjct: 471 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCM 530
Query: 619 VDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNA 678
+D+ R G L+EA ++ M + +A W L C HKNLE+GE A L +L+P +
Sbjct: 531 IDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDT 590
Query: 679 SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
+ Y+ N++ AG+WEE + LM ++ K CSWI+ + +I F+ D + P+
Sbjct: 591 AGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGD--KHHPQ 648
Query: 739 TIQI 742
T +I
Sbjct: 649 TQEI 652
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 200/438 (45%), Gaps = 38/438 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N ++ ++ + + DA +LFD+MS+ N VS TMI+ Y ++++A LF M +
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKL-------DTACWNAVIAGYAKKGQFSDAEKV 183
+ M T + +A + + + +T+ ++ Y K G A++V
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG-----D 238
F+ M VK V+ ++ GYTQ G+ AL F + + V W+ V V +
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEWDSFVFSVVLKACASLEE 300
Query: 239 LSSARQL---FEKIPNPNAVSWVTMLCGF-ARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
L+ +Q+ K+ + VS T L F + A R F + N VSW+A+I+
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 295 YAQDLQIDEAVKLFIKMPHKDG-----VSWTTIINGYIRVGKLDEAREVYNQMPCKDIA- 348
Y Q Q +EAVK F + K+ ++T+I + + +V+ + +
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 349 ---AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
E+AL++ + G +D+A+++F + D + W + I+G G EAL LF +M
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 406 ----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER-----NIVSWNSLITGFLQNSLY 456
K NSV++ +++ + AG ++ ++ M + I ++ +I + ++ L
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 457 FDALKSLVLMGREGKKPD 474
+ALK + M E PD
Sbjct: 541 DEALKFMKNMPFE---PD 555
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 85/158 (53%), Gaps = 13/158 (8%)
Query: 57 RVFSNTIHKNLVTY----NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNS 112
+V ++ I ++L+ +++I++++K G + DA ++F+ M ++V+W I+G+ +
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 113 MVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC----W 164
EA +LF+ M + ++ ++ ++T + G +E+ + L+ + K + A +
Sbjct: 468 NASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY 527
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAG 201
+ +I YA+ G +A K MP + D +S+ L+G
Sbjct: 528 DCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS-- 94
+ ++ I K G +++A VF + + ++V + + IS A G S+A +LF+KM
Sbjct: 423 YGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC 482
Query: 95 --QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEK 147
+ N V++ ++ H +VE+ D M + N + + MI Y R G L++
Sbjct: 483 GMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 542
Query: 148 ARELLELVPDKLDTACWNAVIAG 170
A + ++ +P + D W ++G
Sbjct: 543 ALKFMKNMPFEPDAMSWKCFLSG 565
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 240/441 (54%), Gaps = 42/441 (9%)
Query: 366 ASKMFNQLSTR-DTICWNSMIAGFCQSGRMDEALDLFRQM-------PKKNSVSW----- 412
A K+F+++ + WN++I G+ + G A L+R+M P ++ +
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 413 ----------------------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
N+++ YA G + SA +F M E+++V+WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS 504
S+I GF +N +AL M +G KPD T +G ++H Y++K
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 505 GYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAF 564
G +L SN L+ +YA+CGRVE A+ +F + + +SW SLI G A+NG+ EA + F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 565 KQMLSEE-VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
K M S E ++P ++TF+G+L ACSH G+ +G + F+ M E++ IEP EH+ C+VDLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYIT 683
R G++++A+ ++ M ++ N +W +LLGAC VH + ++ EFA +++ +LEP+++ +Y+
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQII 743
LSNM+A RW +V+++R M K+PG S +EV N++ FL D + + I
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 744 LNAISAHMRDKFNVFNMQSVF 764
L ++ +R + V + +V+
Sbjct: 492 LKEMTGRLRSEGYVPQISNVY 512
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 126/259 (48%), Gaps = 33/259 (12%)
Query: 394 MDEALDLFRQMPKK-NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQ 452
M A +F ++ K N WNT+I GYA+ G SA ++++ M ++G ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMR----------VSGLVE 118
Query: 453 NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFV 512
PD T+ ++G +H +++SG+ + ++V
Sbjct: 119 --------------------PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYV 158
Query: 513 SNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEV 572
N+L+ +YA CG V SA +VF + DL++WNS+I+G+A NG EA + +M S+ +
Sbjct: 159 QNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI 218
Query: 573 VPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAF 632
PD T + +LSAC+ G G + M++ L + L+DL R GR+EEA
Sbjct: 219 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS-NVLLDLYARCGRVEEAK 277
Query: 633 NVVRGMDVKANAGLWGSLL 651
+ M V N+ W SL+
Sbjct: 278 TLFDEM-VDKNSVSWTSLI 295
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 205/483 (42%), Gaps = 78/483 (16%)
Query: 52 VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR-NLVSWNTMIAGYLH 110
+ V + + K+L+ Y ++S+ +S A ++F K+ + N+ WNT+I GY
Sbjct: 41 IRHGVSISDAELGKHLIFY--LVSL-PSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAE 97
Query: 111 NSMVEEASKLFDVMP-----ERDNFSWALMITCYTRKGKLEKARELLELV-PDKLDTACW 164
A L+ M E D ++ +I T + + +V + +
Sbjct: 98 IGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIY 157
Query: 165 --NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
N+++ YA G + A KVF+ MP KDLV++NS++ G+ +NGK AL + +M K
Sbjct: 158 VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP- 281
+ P+ + V++L A+ G +T +R+ M
Sbjct: 218 I---------------------------KPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 282 ---CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREV 338
+N+ S N ++ YA+ +++EA LF +M K+ VSWT++I G G EA E+
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 339 YNQM-------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIA 386
+ M PC+ ++ G V E + F ++ I + M+
Sbjct: 311 FKYMESTEGLLPCE--ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 387 GFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAE----NIFQAMEERNIV 441
++G++ +A + + MP + N V W T++ G D AE I Q +E +
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ-LEPNHSG 427
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREG--KKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
+ L + + D K M R+G K P S +VGN++HE
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV-------------EVGNRVHE 474
Query: 500 YIL 502
+++
Sbjct: 475 FLM 477
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 24/273 (8%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISV 76
+++ H + I S G ++ +N + G V A +VF K+LV +NS+I+
Sbjct: 137 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 196
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL--------FDVMPERD 128
FA+NGK +A L+ +M+ + + I L A L V R+
Sbjct: 197 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 256
Query: 129 NFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFN--- 185
S +++ Y R G++E+A+ L + + DK ++ W ++I G A G +A ++F
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 186 ----LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLMVSGFVNS 236
L+P + +++ +L + G + +F +M E+ + + MV +
Sbjct: 316 STEGLLPCE--ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 237 GDLSSARQLFEKIP-NPNAVSWVTMLCGFARHG 268
G + A + + +P PN V W T+L HG
Sbjct: 374 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 262/478 (54%), Gaps = 8/478 (1%)
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
AYA +I ++ LF + D +T IN G D+A +Y Q+ +I
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 354 MSGLIQTGRVDEASKMFNQLSTR-----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKN 408
S L+++ ++ K+ + + D ++ + + G + A +F +MP+++
Sbjct: 133 FSSLLKSCST-KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERS 191
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
VS MI+ YA+ G +++A +F +M ER+IVSWN +I G+ Q+ DAL +
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 469 EGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
EGK KPD+ T + G +H ++ S ++ V LI MY+KCG +E
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLE 311
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS-EEVVPDQVTFIGMLSAC 586
A VF D+++WN++I+GYA++GY+ +A + F +M + P +TFIG L AC
Sbjct: 312 EAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQAC 371
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
+HAGL N+G+ +F+ M +++ I+P EHY CLV LLGR G+L+ A+ ++ M++ A++ L
Sbjct: 372 AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVL 431
Query: 647 WGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
W S+LG+C++H + +G+ A L L N+ Y+ LSN++A G +E V ++R LM++
Sbjct: 432 WSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKE 491
Query: 707 KRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDKFNVFNMQSVF 764
K K PG S IE++N++ F + D + + I +L IS ++ V N +V
Sbjct: 492 KGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVL 549
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 204/472 (43%), Gaps = 70/472 (14%)
Query: 52 VEEAVRVFSNTIHKNLVTYN-------SMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
V+E +++ + + NL+ + + +A +GKI + LF + +L +
Sbjct: 42 VDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAA 101
Query: 105 IAGYLHNSMVEEASKLF------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
I N + ++A L+ ++ P FS +L+ +C T+ GKL L +
Sbjct: 102 INTASINGLKDQAFLLYVQLLSSEINPNEFTFS-SLLKSCSTKSGKLIHTHVLKFGL--G 158
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+D ++ YAK G A+KVF+ MP + LVS +M+ Y + G + A F+ M
Sbjct: 159 IDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 218
Query: 219 AEKNVVSWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAVSWVTMLCG---------- 263
E+++VSWN+M+ G+ G + A LF+K+ P P+ ++ V L
Sbjct: 219 CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 278
Query: 264 -------------------------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQD 298
+++ G + EA +F+ P K++V+WNAMIA YA
Sbjct: 279 RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMH 338
Query: 299 LQIDEAVKLFIKMPHKDGVSWTTI-----INGYIRVGKLDEAREVYNQMPCK-----DIA 348
+A++LF +M G+ T I + G ++E ++ M + I
Sbjct: 339 GYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIE 398
Query: 349 AETALMSGLIQTGRVDEASKMFNQLST-RDTICWNSMIAGFCQSGRM---DEALDLFRQM 404
L+S L + G++ A + ++ D++ W+S++ G E + +
Sbjct: 399 HYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGL 458
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
KNS + + + YA G + + M+E+ IV + T ++N ++
Sbjct: 459 NIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVH 510
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 191/710 (26%), Positives = 334/710 (47%), Gaps = 97/710 (13%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
+V N + +S+++++AK G ++ AR++F++M +R++V W MI Y +V E
Sbjct: 71 QVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGE 130
Query: 117 ASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYA 172
A L + M + + M++ +L+ + + D A N+++ Y
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------AEKNVVSW 226
K DA+ +F+ M +D+VS+N+M++GY G M L +M ++
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPN-------AVSWVTMLCGFARHGKITEARRLFDS 279
+L VSG DL R L +I + +TM + + GK + R+ ++
Sbjct: 251 SLSVSG--TMCDLEMGRMLHCQIVKTGFDVDMHLKTALITM---YLKCGKEEASYRVLET 305
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVY 339
+P K+VV W T +I+G +R+G+ ++A V+
Sbjct: 306 IPNKDVVCW-------------------------------TVMISGLMRLGRAEKALIVF 334
Query: 340 NQM--PCKDIAAE--TALMSGLIQTGRVDEASKMFNQL----STRDTICWNSMIAGFCQS 391
++M D+++E ++++ Q G D + + + T DT NS+I + +
Sbjct: 335 SEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKC 394
Query: 392 GRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFL 451
G +D++L +F +M +++ VSWN +ISGYAQ + A +F+ M+ + + +S
Sbjct: 395 GHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDS------ 448
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
F + L G P VG +H +++S
Sbjct: 449 -----FTVVSLLQACSSAGALP-------------------VGKLIHCIVIRSFIRPCSL 484
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE 571
V AL+ MY+KCG +E+A++ F +I D++SW LI+GY +G A + + + L
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 572 VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA 631
+ P+ V F+ +LS+CSH G+ QGL +F MV DF +EP EH +C+VDLL R R+E+A
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
Query: 632 FNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEA 691
F + + + + G +L ACR + E+ + + EL+P +A +Y+ L + A
Sbjct: 605 FKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAM 664
Query: 692 GRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL------SDDSGRL 735
RW++V MR KLPG S IE+ + F SDD+ L
Sbjct: 665 KRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTVSL 714
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 212/489 (43%), Gaps = 105/489 (21%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWN 102
K G + A +VF +++V + +MI +++ G + +A L ++M + + V+
Sbjct: 92 AKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLL 151
Query: 103 TMIAGYLH-----------------------NSM---------VEEASKLFDVMPERDNF 130
M++G L NSM V +A LFD M +RD
Sbjct: 152 EMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMV 211
Query: 131 SWALMITCYTRKGKLEKARELLE------LVPDK-------------------------- 158
SW MI+ Y G + + +LL L PD+
Sbjct: 212 SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQI 271
Query: 159 ------LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+D A+I Y K G+ + +V +P KD+V + M++G + G+ AL
Sbjct: 272 VKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKAL 331
Query: 213 HFFEKMAEKN------VVSWNLMVSGFVNSGDLSSARQLF-----EKIPNPNAVSWVTML 261
F +M + ++ + + S DL ++ + + P S +TM
Sbjct: 332 IVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITM- 390
Query: 262 CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-----DG 316
+A+ G + ++ +F+ M +++VSWNA+I+ YAQ++ + +A+ LF +M K D
Sbjct: 391 --YAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDS 448
Query: 317 VSWTTIIN-----GYIRVGKLDEAREVYNQM-PCKDIAAETALMSGLIQTGRVDEASKMF 370
+ +++ G + VGKL + + + PC + +TAL+ + G ++ A + F
Sbjct: 449 FTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLV--DTALVDMYSKCGYLEAAQRCF 506
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMD 426
+ +S +D + W +IAG+ G+ D AL+++ + + N V + ++S + G +
Sbjct: 507 DSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQ 566
Query: 427 SAENIFQAM 435
IF +M
Sbjct: 567 QGLKIFSSM 575
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 7/213 (3%)
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS----WNTMISGYAQAGQMDSAENIF 432
DT + S++ R+ L + +Q+ S +++++ YA+ G + A +F
Sbjct: 45 DTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVF 104
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ 492
+ M ER++V W ++I + + + +A + M +G KP T Q
Sbjct: 105 EEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ 164
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
LH++ + G+ D+ V N+++ +Y KC V A+ +F +E D++SWN++ISGYA
Sbjct: 165 C---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYA 221
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
G E K +M + + PDQ TF LS
Sbjct: 222 SVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV 254
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
PD TF G +H+ +L +G+ +D ++S++L+ +YAK G + A +V
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKV 103
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
F + D++ W ++I Y+ G EA +M + + P VT + MLS
Sbjct: 104 FEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSG 156
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 139/348 (39%), Gaps = 65/348 (18%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
N I K G +++++ +F ++LV++N++IS +A+N + A LF++M
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK----- 439
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 159
F + + D+F+ ++ + G L + + +V
Sbjct: 440 ---------------------FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF 478
Query: 160 DTACW---NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
C A++ Y+K G A++ F+ + KD+VS+ ++AGY +GK +AL +
Sbjct: 479 IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIY- 537
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
S F++SG PN V ++ +L + +G + + ++
Sbjct: 538 --------------SEFLHSG------------MEPNHVIFLAVLSSCSHNGMVQQGLKI 571
Query: 277 FDSMPCKNVVSWNAMIAAYAQDL-----QIDEAVKLFIKMPHKDGVSWTTIINGYIRVGK 331
F SM V N A DL +I++A K + + + + II R
Sbjct: 572 FSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANG 631
Query: 332 LDEAREVYN----QMPCKDIAAETALMSGLIQTGRVDEASKMFNQLST 375
E ++ ++ D L R D+ S+ +NQ+ +
Sbjct: 632 KTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRS 679
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 254/462 (54%), Gaps = 8/462 (1%)
Query: 301 IDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT 360
+D A +F + + + +T +I+G++ G+ + +Y++M + + +++ +++
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 361 GRVDEASKMFNQL------STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT 414
+ ++ Q+ S+R M+ + +SG + A +F +MP ++ V+
Sbjct: 137 CDLKVCREIHAQVLKLGFGSSRSV--GLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATV 194
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
MI+ Y++ G + A +FQ ++ ++ V W ++I G ++N AL+ M E +
Sbjct: 195 MINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSAN 254
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
+ T ++G +H ++ FV NALI MY++CG + A +VF
Sbjct: 255 EFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR 314
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ D+IS+N++ISG A++G ++EA F+ M++ P+QVT + +L+ACSH GL +
Sbjct: 315 VMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDI 374
Query: 595 GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
GL++F M F +EP EHY C+VDLLGR+GRLEEA+ + + ++ + + G+LL AC
Sbjct: 375 GLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSAC 434
Query: 655 RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
++H N+E+GE A RL E E ++ Y+ LSN++A +G+W+E +R MRD K PG
Sbjct: 435 KIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPG 494
Query: 715 CSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDKFN 756
CS IEV NQI FL D E I L ++ +R K N
Sbjct: 495 CSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKEN 536
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 190/423 (44%), Gaps = 62/423 (14%)
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A VF+ + ++ Y +M+ G+ +G+ + + +M +V+ N +++ + + DL
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL 139
Query: 240 SSARQLFEKIPNPNAVS----WVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
R++ ++ S + M+ + + G++ A+++FD MP ++ V+ MI Y
Sbjct: 140 KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCY 199
Query: 296 AQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----T 351
++ I EA++LF + KD V WT +I+G +R ++++A E++ +M ++++A
Sbjct: 200 SECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAV 259
Query: 352 ALMSGLIQTGRVDEA----SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
++S G ++ S + NQ N++I + + G ++EA +FR M K
Sbjct: 260 CVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK 319
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL------K 461
+ +S+NTMISG A G A N F+ M R GF N + AL
Sbjct: 320 DVISYNTMISGLAMHGASVEAINEFRDMVNR----------GFRPNQVTLVALLNACSHG 369
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
L+ +G E + F V Q+ Y G I DL
Sbjct: 370 GLLDIGLEVFNSMKRVF-------------NVEPQIEHY----GCIVDLL---------- 402
Query: 522 KCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
GRV E+ + IE + D I +L+S ++G +E + + L E PD
Sbjct: 403 --GRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHG-NMELGEKIAKRLFESENPDSG 459
Query: 578 TFI 580
T++
Sbjct: 460 TYV 462
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 210/478 (43%), Gaps = 66/478 (13%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
L V+ A VFS + N+ Y +MI F +G+ +D L+ +M
Sbjct: 74 LDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRM--------------- 118
Query: 109 LHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAV- 167
+HNS V+P DN+ +IT + L+ RE+ V KL +V
Sbjct: 119 IHNS----------VLP--DNY----VITSVLKACDLKVCREIHAQVL-KLGFGSSRSVG 161
Query: 168 ---IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
+ Y K G+ +A+K+F+ MP +D V+ M+ Y++ G + AL F+ + K+ V
Sbjct: 162 LKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV 221
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFD-- 278
W M+ G V + +++ A +LF ++ + N + V +L + G + R +
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 279 ---SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVG----K 331
M N V NA+I Y++ I+EA ++F M KD +S+ T+I+G G
Sbjct: 282 ENQRMELSNFVG-NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIA 386
++E R++ N+ + AL++ G +D ++FN + + + ++
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 387 GFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAM-EERNIVSWN 444
+ GR++EA +P + + + T++S G M+ E I + + E N S
Sbjct: 401 LLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSG- 459
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
T L ++LY + K +E + +S +V NQ+HE+++
Sbjct: 460 ---TYVLLSNLYASSGK-----WKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLV 509
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 155/326 (47%), Gaps = 24/326 (7%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
GK G++ A ++F ++ V MI+ +++ G I +A +LF + ++ V W MI
Sbjct: 169 GKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMID 228
Query: 107 GYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDK---L 159
G + N + +A +LF M + F+ +++ + G LE R + V ++ L
Sbjct: 229 GLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMEL 288
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
NA+I Y++ G ++A +VF +M KD++SYN+M++G +G A++ F M
Sbjct: 289 SNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV 348
Query: 220 EK----NVVSWNLMVSGFVNSGDL-------SSARQLFEKIPNPNAVSWVTMLCGFARHG 268
+ N V+ +++ + G L +S +++F P + L G R G
Sbjct: 349 NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG--RVG 406
Query: 269 KITEARRLFDSMPCK-NVVSWNAMIAA--YAQDLQIDEAV-KLFIKMPHKDGVSWTTIIN 324
++ EA R +++P + + + +++A ++++ E + K + + D ++ + N
Sbjct: 407 RLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSN 466
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAE 350
Y GK E+ E+ M I E
Sbjct: 467 LYASSGKWKESTEIRESMRDSGIEKE 492
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 251/496 (50%), Gaps = 36/496 (7%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAY-------AQDLQIDEAVKLFIKMPHKDGVSWT 320
G + A +F PC N N MI A A + I KL+ D ++
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
++ +RV + R+++ Q+ + +++GLIQ
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQM-------------------- 160
Query: 381 WNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME--ER 438
+ G + +A +F +M K+ WN +++GY + G+MD A ++ + M R
Sbjct: 161 -------YFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVR 213
Query: 439 NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
N VSW +I+G+ ++ +A++ M E +PD+ T ++G ++
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
Y+ G + ++NA+I MYAK G + A VF + ++++W ++I+G A +G+
Sbjct: 274 SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGA 333
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
EA F +M+ V P+ VTFI +LSACSH G + G LF M + I P EHY C+
Sbjct: 334 EALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393
Query: 619 VDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNA 678
+DLLGR G+L EA V++ M KANA +WGSLL A VH +LE+GE A L +LEP+N+
Sbjct: 394 IDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNS 453
Query: 679 SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
NY+ L+N+++ GRW+E +R +M+ K+ G S IEV+N++ F+S D + E
Sbjct: 454 GNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVE 513
Query: 739 TIQIILNAISAHMRDK 754
I IL + ++ K
Sbjct: 514 RIHEILQEMDLQIQSK 529
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 173/368 (47%), Gaps = 69/368 (18%)
Query: 55 AVRV----FSNTIHKNLVTY---------NSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
AVRV F IH +V + +I ++ G + DAR++FD+M +++ W
Sbjct: 126 AVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVW 185
Query: 102 NTMIAGYLHNSMVEEASKLFDVMP--ERDNFSWALMITCYTRKGKLEKA-----RELLEL 154
N ++AGY ++EA L ++MP R+ SW +I+ Y + G+ +A R L+E
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 155 V-PDKLD-----TACW---------------------------NAVIAGYAKKGQFSDAE 181
V PD++ +AC NAVI YAK G + A
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKAL 305
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSG 237
VF + +++V++ +++AG +G AL F +M + V V++ ++S + G
Sbjct: 306 DVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG 365
Query: 238 DLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAM 291
+ ++LF + +PN + M+ R GK+ EA + SMP K N W ++
Sbjct: 366 WVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSL 425
Query: 292 IAA--YAQDLQIDE-AVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMP---CK 345
+AA DL++ E A+ IK+ + ++ + N Y +G+ DE+R + N M K
Sbjct: 426 LAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVK 485
Query: 346 DIAAETAL 353
+A E+++
Sbjct: 486 KMAGESSI 493
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 144/299 (48%), Gaps = 29/299 (9%)
Query: 158 KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT---QNGKMGLALHF 214
K AC NA G A VF P + +N+M+ + + +A+
Sbjct: 52 KFIEACSNA--------GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITV 103
Query: 215 FEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARH--- 267
+ K+ A+ + ++ ++ V D+ RQ+ ++ S V ++ G +
Sbjct: 104 YRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFS 163
Query: 268 -GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH--KDGVSWTTIIN 324
G + +AR++FD M K+V WNA++A Y + ++DEA L MP ++ VSWT +I+
Sbjct: 164 CGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVIS 223
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLS----TR 376
GY + G+ EA EV+ +M +++ + A++S G ++ ++ + + R
Sbjct: 224 GYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNR 283
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
N++I + +SG + +ALD+F + ++N V+W T+I+G A G A +F M
Sbjct: 284 AVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM 342
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 16/213 (7%)
Query: 49 LGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
LG +E R+ S H+ + N++I ++AK+G I+ A +F+ +++RN+V+W T+
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 105 IAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKL- 159
IAG + EA +F+ M + ++ ++ +++ + G ++ + L + K
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 160 ---DTACWNAVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGL---AL 212
+ + +I + G+ +A++V MP K + + S+LA + + L AL
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQL 245
K+ N ++ L+ + + N G +R +
Sbjct: 443 SELIKLEPNNSGNYMLLANLYSNLGRWDESRMM 475
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 265 bits (678), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 165/551 (29%), Positives = 275/551 (49%), Gaps = 41/551 (7%)
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQ 244
N++P+ L+ + + + + A FE + +V WN M+ G+ NS + A
Sbjct: 37 NVIPLSRLIDFCTTCP---ETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALI 93
Query: 245 LFEKI------PNPNAVSWVTMLC--------GFARHGKITEARRLFDSMPCKNVVSWNA 290
++++ P+ +V C G HG + + F+ N+
Sbjct: 94 FYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG--FEV----NMYVSTC 147
Query: 291 MIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAA- 349
++ Y +++ +++F +P + V+W ++I+G++ + +A E + +M + A
Sbjct: 148 LLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKAN 207
Query: 350 ETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
ET ++ L+ GR + I GF Q D F+ N
Sbjct: 208 ETIMVDLLVACGRCKD-------------IVTGKWFHGFLQGLGFDP---YFQSKVGFNV 251
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
+ ++I YA+ G + +A +F M ER +VSWNS+ITG+ QN +AL + M
Sbjct: 252 ILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL 311
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
G PD+ TF Q+G +H Y+ K+G++ D + AL+ MYAK G ESA
Sbjct: 312 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 530 EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSH 588
++ F +E D I+W +I G A +G+ EA F++M + PD +T++G+L ACSH
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSH 431
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
GL +G F M + +EP EHY C+VD+L R GR EEA +V+ M VK N +WG
Sbjct: 432 IGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 491
Query: 649 SLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKR 708
+LL C +H+NLE+ + ++E E + Y+ LSN++A+AGRW +V+ +R M+ KR
Sbjct: 492 ALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKR 551
Query: 709 AGKLPGCSWIE 719
K+ G S +E
Sbjct: 552 VDKVLGHSSVE 562
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 146/310 (47%), Gaps = 21/310 (6%)
Query: 59 FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
F + + N++ S+I ++AK G + AR LFD M +R LVSWN++I GY N EEA
Sbjct: 243 FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEAL 302
Query: 119 KLF----DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGY 171
+F D+ D ++ +I +G + + + V D A A++ Y
Sbjct: 303 CMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMY 362
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSW 226
AK G A+K F + KD +++ ++ G +G AL F++M EK + +++
Sbjct: 363 AKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITY 422
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMP 281
++ + G + ++ F ++ + P + M+ +R G+ EA RL +MP
Sbjct: 423 LGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP 482
Query: 282 CK-NVVSWNAMIAA--YAQDLQIDEAVKLFIKMPHKDGVS-WTTIINGYIRVGKLDEARE 337
K NV W A++ ++L++ + ++ + P + G + + N Y + G+ + +
Sbjct: 483 VKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKL 542
Query: 338 VYNQMPCKDI 347
+ M K +
Sbjct: 543 IRESMKSKRV 552
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 185/415 (44%), Gaps = 43/415 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
N+ ++ ++ G+++ ++F+ + Q N+V+W ++I+G+++N+ +A + F M
Sbjct: 141 NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ 200
Query: 126 E-----RDNFSWALMITCYTRK----GK-LEKARELLELVPDKLDTACWNAVIAG----- 170
+ L++ C K GK + L P +N ++A
Sbjct: 201 SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
YAK G A +F+ MP + LVS+NS++ GY+QNG AL F M + + +
Sbjct: 261 YAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTF 320
Query: 231 SGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCG----FARHGKITEARRLFDSMPC 282
+ + + QL + I V ++C +A+ G A++ F+ +
Sbjct: 321 LSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK 380
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-----DGVSWTTIINGYIRVGKLDEARE 337
K+ ++W +I A +EA+ +F +M K DG+++ ++ +G ++E +
Sbjct: 381 KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQR 440
Query: 338 VYNQMPCKDIAA-------ETALMSGLIQTGRVDEASKMFNQLSTRDTI-CWNSMIAGFC 389
+ +M +D+ ++ L + GR +EA ++ + + + W +++ G C
Sbjct: 441 YFAEM--RDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG-C 497
Query: 390 QSGRMDEALDLFRQM---PKKNSVSWNTMISG-YAQAGQMDSAENIFQAMEERNI 440
E D R M P++ ++S YA+AG+ + I ++M+ + +
Sbjct: 498 DIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRV 552
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 495 NQLHEYILKSGYINDLFVSNALIAMYAKCGR---VESAEQVFTAIECVDLISWNSLISGY 551
NQLH ++KS I ++ + LI C + A VF +I+C + WNS+I GY
Sbjct: 23 NQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
+ + +A +++ML + PD TF +L ACS GL + F V F ++
Sbjct: 83 SNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS--GLRDIQ---FGSCVHGFVVKTG 137
Query: 612 AE----HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
E +CL+ + G + V + + N WGSL+
Sbjct: 138 FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLI 180
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/449 (31%), Positives = 235/449 (52%), Gaps = 43/449 (9%)
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
D +L+SG +G D AS++F+ +D + W +MI GF ++G EA+ F +M
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM- 195
Query: 406 KKNSVSWNTM-----------------------------------------ISGYAQAGQ 424
KK V+ N M + Y +
Sbjct: 196 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 255
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX 484
D A+ +F M RN+V+W +LI G++Q+ + + M + P++ T
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
G ++H Y++K+ + LI +Y KCG +E A VF + ++ +W
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
++I+G+A +GYA +AF F MLS V P++VTF+ +LSAC+H GL +G LF M
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKG 435
Query: 605 DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGE 664
F +EP A+HY+C+VDL GR G LEEA ++ M ++ +WG+L G+C +HK+ E+G+
Sbjct: 436 RFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGK 495
Query: 665 FAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQI 724
+AA R+ +L+P ++ Y L+N+++E+ W+EV R+R M+D++ K PG SWIEV+ ++
Sbjct: 496 YAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKL 555
Query: 725 QCFLS-DDSGRLRPETIQIILNAISAHMR 752
F++ DD L + + L+ + MR
Sbjct: 556 CEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 143/303 (47%), Gaps = 27/303 (8%)
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
D N++I+GY+ G F A ++F+ KD+V++ +M+ G+ +NG A+ +F +M
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 220 EKNVVSWNLMVSGFVNSG----DLSSARQLFEKIPNPNAV--------SWVTMLCGFARH 267
+ V + + V + + D+ R + V S V M + +
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM---YGKC 253
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV----SWTTII 323
+A+++FD MP +NVV+W A+IA Y Q D+ + +F +M D + ++++
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVL 313
Query: 324 NGYIRVGKLDEAREVYNQMPCKDI----AAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
+ VG L R V+ M I A T L+ ++ G ++EA +F +L ++
Sbjct: 314 SACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 373
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
W +MI GF G +A DLF M N V++ ++S A G ++ +F +M
Sbjct: 374 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433
Query: 436 EER 438
+ R
Sbjct: 434 KGR 436
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 168/403 (41%), Gaps = 68/403 (16%)
Query: 7 WDDTRGE-------NHKIKMTSMKHKLTIGSIGGKHVFNKN-QQIIHLGKLGKVEEAVRV 58
WD G N ++ + +H G I +H F + + L + +
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHI 129
Query: 59 FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
+ + NS+IS ++ +G A +LFD +++V+W MI G++ N EA
Sbjct: 130 VKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAM 189
Query: 119 KLFDVMPERDNFSWALMITCYTRK-GKLEKAR-------ELLELVPDKLDTACWNAVIAG 170
F M + + + + + GK+E R LE K D ++++
Sbjct: 190 VYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM 249
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------------ 218
Y K + DA+KVF+ MP +++V++ +++AGY Q+ + FE+M
Sbjct: 250 YGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTL 309
Query: 219 ---------------------------AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
E N + ++ +V G L A +FE++
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE 369
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKL 307
N +W M+ GFA HG +A LF +M +V V++ A+++A A ++E +L
Sbjct: 370 KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL 429
Query: 308 FIKM-------PHKDGVSWTTIINGYIRVGKLDEAREVYNQMP 343
F+ M P D + +++ + R G L+EA+ + +MP
Sbjct: 430 FLSMKGRFNMEPKAD--HYACMVDLFGRKGLLEEAKALIERMP 470
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 146/325 (44%), Gaps = 36/325 (11%)
Query: 50 GKVEEAVRVFSNTIHK----------NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV 99
GKVE+ VR F ++H ++ +S++ ++ K DA+++FD+M RN+V
Sbjct: 215 GKVED-VR-FGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVV 272
Query: 100 SWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSWALMITCYTRKGKLEKAREL-L 152
+W +IAGY+ + ++ +F DV P S L + G L + R +
Sbjct: 273 TWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHV--GALHRGRRVHC 330
Query: 153 ELVPD--KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGL 210
++ + +++T +I Y K G +A VF + K++ ++ +M+ G+ +G
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD 390
Query: 211 ALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTML 261
A F M +V V++ ++S + G + R+LF + P A + M+
Sbjct: 391 AFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMV 450
Query: 262 CGFARHGKITEARRLFDSMPCKNV-VSWNAMIAA--YAQDLQIDE-AVKLFIKMPHKDGV 317
F R G + EA+ L + MP + V W A+ + +D ++ + A IK+
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSG 510
Query: 318 SWTTIINGYIRVGKLDEAREVYNQM 342
+T + N Y DE V QM
Sbjct: 511 RYTLLANLYSESQNWDEVARVRKQM 535
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 115/271 (42%), Gaps = 12/271 (4%)
Query: 422 AGQMDSAENIFQAMEERNIVSWNSLITGF-----LQNSLYFDALKSLVLMGREGKKPDQS 476
A Q A + ++ +I W+SLI F L L F A + M R G P +
Sbjct: 49 ATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRH---MRRNGVIPSRH 105
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
TF Q H +I+K G +D FV N+LI+ Y+ G + A ++F
Sbjct: 106 TFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGA 164
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
E D+++W ++I G+ NG A EA F +M V +++T + +L A G
Sbjct: 165 EDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGR 224
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+ +E ++ S LVD+ G+ ++A V M + N W +L+
Sbjct: 225 SVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIAGYVQ 283
Query: 657 HKNLEIGE--FAAMRLSELEPHNASNYITLS 685
+ + G F M S++ P+ + LS
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 213/353 (60%), Gaps = 1/353 (0%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
N+++ YA G + SA +F M E+++V+WNS+I GF +N +AL M +G K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
PD T +G ++H Y++K G +L SN L+ +YA+CGRVE A+ +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGL 591
F + + +SW SLI G A+NG+ EA + FK M S E ++P ++TF+G+L ACSH G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+G + F+ M E++ IEP EH+ C+VDLL R G++++A+ ++ M ++ N +W +LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 652 GACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
GAC VH + ++ EFA +++ +LEP+++ +Y+ LSNM+A RW +V+++R M K
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 712 LPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDKFNVFNMQSVF 764
+PG S +EV N++ FL D + + I L ++ +R + V + +V+
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVY 379
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
++G +H +++SG+ + ++V N+L+ +YA CG V SA +VF + DL++WNS+I+G+
Sbjct: 5 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
A NG EA + +M S+ + PD T + +LSAC+ G G + M++ L
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+ L+DL R GR+EEA + M V N+ W SL+
Sbjct: 125 HSS-NVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 66/361 (18%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N+++ YA G + A KVF+ MP KDLV++NS++ G+ +NGK AL + +M K +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI- 85
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP--- 281
P+ + V++L A+ G +T +R+ M
Sbjct: 86 --------------------------KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 282 -CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYN 340
+N+ S N ++ YA+ +++EA LF +M K+ VSWT++I G G EA E++
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 341 QM-------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGF 388
M PC+ ++ G V E + F ++ I + M+
Sbjct: 180 YMESTEGLLPCE--ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 389 CQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAE----NIFQAMEERNIVSW 443
++G++ +A + + MP + N V W T++ G D AE I Q +E + +
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ-LEPNHSGDY 296
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREG--KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
L + + D K M R+G K P S +VGN++HE++
Sbjct: 297 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV-------------EVGNRVHEFL 343
Query: 502 L 502
+
Sbjct: 344 M 344
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 119/242 (49%), Gaps = 18/242 (7%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
NS++ ++A G ++ A ++FDKM +++LV+WN++I G+ N EEA L+ M +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 128 -DNFSWALMITCYTRKGKLEKAREL---LELVPDKLDTACWNAVIAGYAKKGQFSDAEKV 183
D F+ +++ + G L + + + V + N ++ YA+ G+ +A+ +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKNVVSWNLMVSGFV----NSGD 238
F+ M K+ VS+ S++ G NG A+ F+ M + + ++ + G + + G
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 239 LSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMI 292
+ + F ++ P + M+ AR G++ +A SMP + NVV W ++
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 293 AA 294
A
Sbjct: 267 GA 268
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 24/273 (8%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISV 76
+++ H + I S G ++ +N + G V A +VF K+LV +NS+I+
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL--------FDVMPERD 128
FA+NGK +A L+ +M+ + + I L A L V R+
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 129 NFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFN--- 185
S +++ Y R G++E+A+ L + + DK ++ W ++I G A G +A ++F
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 186 ----LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLMVSGFVNS 236
L+P + +++ +L + G + +F +M E+ + + MV +
Sbjct: 183 STEGLLPCE--ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 237 GDLSSARQLFEKIP-NPNAVSWVTMLCGFARHG 268
G + A + + +P PN V W T+L HG
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 40/172 (23%)
Query: 347 IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
I + +L+ G V A K+F+++ +D + WNS+I GF ++G+ +EAL L+ +M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 407 K---------------------------------------NSVSWNTMISGYAQAGQMDS 427
K N S N ++ YA+ G+++
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM-GREGKKPDQSTF 478
A+ +F M ++N VSW SLI G N +A++ M EG P + TF
Sbjct: 143 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 194
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+NL + N ++ ++A+ G++ +A+ LFD+M +N VSW ++I G N +EA +LF M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 125 -------PERDNFSWALMIT--CYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKG 175
P F L C K E R + E + + ++ A+ G
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241
Query: 176 QFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGLA 211
Q A + MP++ ++V + ++L T +G LA
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/538 (28%), Positives = 271/538 (50%), Gaps = 57/538 (10%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIR 328
A ++FDSMP +NVVSW+A+++ + + + ++ LF +M + + +++T +
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 329 VGKLDEAREVYNQMPCKDIAAE------TALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
+ L++ +++ C I E +L+ + GR++EA K+F ++ R I WN
Sbjct: 120 LNALEKGLQIHG--FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKN---------------------------------- 408
+MIAGF +G +ALD F M + N
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 409 ---------SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDA 459
+ +++ Y + G + SA F ++E+ ++SW+SLI G+ Q + +A
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEA 297
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
+ + + D + G Q+ +K + V N+++ M
Sbjct: 298 MGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDM 357
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
Y KCG V+ AE+ F ++ D+ISW +I+GY +G ++ + F +ML + PD+V +
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 580 IGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+ +LSACSH+G+ +G +LF ++E I+P EHY+C+VDLLGR GRL+EA +++ M
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP 477
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
+K N G+W +LL CRVH ++E+G+ L ++ N +NY+ +SN++ +AG W E
Sbjct: 478 IKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGN 537
Query: 700 LRVLMRDKRAGKLPGCSWIEVQNQIQCFLS-DDSGRLRPETIQIILNAISAHMRDKFN 756
R L K K G SW+E++ ++ F S +DS L P IQ L +R++
Sbjct: 538 ARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTP-VIQETLKEAERRLREELG 594
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 205/408 (50%), Gaps = 41/408 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
NL+T N +I ++ K + A ++FD M +RN+VSW+ +++G++ N ++ + LF M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 126 ER----DNFSWALMITCYTRKGKLEKARELLEL---VPDKLDTACWNAVIAGYAKKGQFS 178
+ + F+++ + LEK ++ + ++ N+++ Y+K G+ +
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV------VSWNLMVSG 232
+AEKVF + + L+S+N+M+AG+ G AL F M E N+ + ++
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 219
Query: 233 FVNSGDLSSARQLF-----EKIPNPNAVSWVTMLCG-FARHGKITEARRLFDSMPCKNVV 286
++G + + +Q+ P++ + L + + G + AR+ FD + K ++
Sbjct: 220 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 279
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGY-----IRVGKLDEARE 337
SW+++I YAQ+ + EA+ LF ++ D + ++II + +R GK +A
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 338 VYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
V ++P ET++++ ++ + G VDEA K F ++ +D I W +I G+ + G
Sbjct: 340 V--KLPS---GLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGL 394
Query: 394 MDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAMEE 437
+++ +F +M + N V + ++S + +G + E +F + E
Sbjct: 395 GKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 185/390 (47%), Gaps = 42/390 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER--- 127
NS++ +++K G+I++A ++F ++ R+L+SWN MIAG++H +A F +M E
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 128 ---DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAG-----YAKKGQFSD 179
D F+ ++ + G + +++ + +A I G Y K G
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN--VVSWNL--MVSGFVN 235
A K F+ + K ++S++S++ GY Q G+ A+ F+++ E N + S+ L ++ F +
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 236 SGDLSSARQ---LFEKIPNP------NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
L +Q L K+P+ N+V + + CG + EA + F M K+V+
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL-----VDEAEKCFAEMQLKDVI 380
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
SW +I Y + ++V++F +M D V + +++ G + E E+++++
Sbjct: 381 SWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 440
Query: 343 ----PCKDIAAETALMSGLI-QTGRVDEASKMFNQLSTRDTI-CWNSMIAGFCQSGRMD- 395
K A + L+ + GR+ EA + + + + + W ++++ G ++
Sbjct: 441 LETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIEL 500
Query: 396 --EALDLFRQMPKKNSVSWNTMISGYAQAG 423
E + ++ KN ++ M + Y QAG
Sbjct: 501 GKEVGKILLRIDAKNPANYVMMSNLYGQAG 530
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 208/441 (47%), Gaps = 57/441 (12%)
Query: 55 AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL------VSWNTMIAGY 108
A +VF + +N+V++++++S NG + + LF +M ++ + S N G
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 109 LHNSMVEEASKL--------FDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLD 160
L + +E+ ++ F++M E N ++ Y++ G++ +A ++ + D+
Sbjct: 120 L--NALEKGLQIHGFCLKIGFEMMVEVGNS----LVDMYSKCGRINEAEKVFRRIVDR-S 172
Query: 161 TACWNAVIAGYAKKGQFSDAEKVFNLM------PVKDLVSYNSMLAGYTQNGKM--GLAL 212
WNA+IAG+ G S A F +M D + S+L + G + G +
Sbjct: 173 LISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI 232
Query: 213 HFFEKMAEKNVVS----WNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHG 268
H F + + S +V +V G L SAR+ F++I +SW +++ G+A+ G
Sbjct: 233 HGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEG 292
Query: 269 KITEARRLF----------DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS 318
+ EA LF DS +++ A A Q Q+ L +K+P S
Sbjct: 293 EFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQ---ALAVKLPSGLETS 349
Query: 319 -WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR- 376
++++ Y++ G +DEA + + +M KD+ + T +++G + G ++ ++F ++
Sbjct: 350 VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN 409
Query: 377 ---DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSA 428
D +C+ ++++ SG + E +LF ++ + + + + ++ +AG++ A
Sbjct: 410 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA 469
Query: 429 ENIFQAME-ERNIVSWNSLIT 448
+++ M + N+ W +L++
Sbjct: 470 KHLIDTMPIKPNVGIWQTLLS 490
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 185/411 (45%), Gaps = 55/411 (13%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL------VSW 101
K G++ EA +VF + ++L+++N+MI+ F G S A F M + N+ +
Sbjct: 154 KCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTL 213
Query: 102 NTMIAGYLHNSMVEEASKLFDVM-------PERDNFSWALMITCYTRKGKLEKARELLEL 154
+++ M+ ++ + P + +L + Y + G L AR+ +
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSL-VDLYVKCGYLFSARKAFDQ 272
Query: 155 VPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
+ +K + W+++I GYA++G+F +A +F K L NS + + + +G+ F
Sbjct: 273 IKEKTMIS-WSSLILGYAQEGEFVEAMGLF-----KRLQELNSQIDSFALSSIIGVFADF 326
Query: 215 --------FEKMAEK-----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
+ +A K N +V ++ G + A + F ++ + +SW ++
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386
Query: 262 CGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV 317
G+ +HG ++ R+F M N+ V + A+++A + I E +LF K+ G+
Sbjct: 387 TGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446
Query: 318 S-----WTTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMS-----GLIQTGRVDEA 366
+ +++ R G+L EA+ + + MP K ++ L+S G I+ G+ E
Sbjct: 447 KPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK--EV 504
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDE-----ALDLFRQMPKKNSVSW 412
K+ ++ ++ + M + Q+G +E L + + K+ +SW
Sbjct: 505 GKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSW 555
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G Q+H Y+LKSG +L SN LI MY KC A +VF ++ +++SW++L+SG+ L
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK-CMVEDFAIEPLA 612
NG + F +M + + P++ TF L AC +GL + C+ E +
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL--KIGFEMMV 142
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVR 636
E + LVD+ + GR+ EA V R
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFR 166
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 169/595 (28%), Positives = 302/595 (50%), Gaps = 47/595 (7%)
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
P K + +++ Y + G + A F++M +++VV+W M++G+ +S + A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 248 KI------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYA 296
++ PN +S V C R+ K+ L + K ++ NAM+ YA
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSC---RNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 297 Q-DLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
+ ++ A +F + K+ V+WTT+I G+ +G ++Y QM ++ ++
Sbjct: 158 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 217
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTM 415
++ AS + ++T I + + GF + N N++
Sbjct: 218 IAVR------ASASIDSVTTGKQIHASVIKRGF-----------------QSNLPVMNSI 254
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR---EGKK 472
+ Y + G + A++ F ME++++++WN+LI+ ++ D+ ++L++ R +G
Sbjct: 255 LDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS----DSSEALLMFQRFESQGFV 310
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P+ TF G QLH I + G+ ++ ++NALI MYAKCG + +++V
Sbjct: 311 PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRV 370
Query: 533 FTAI-ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGL 591
F I + +L+SW S++ GY +GY EA + F +M+S + PD++ F+ +LSAC HAGL
Sbjct: 371 FGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGL 430
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+GL F M ++ I P + Y+C+VDLLGR G++ EA+ +V M K + WG++L
Sbjct: 431 VEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Query: 652 GACRVHK-NLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAG 710
GAC+ HK N I AA ++ EL+P Y+ LS ++A G+W + R+R +MR
Sbjct: 491 GACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNK 550
Query: 711 KLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDKFNVFNMQSVFD 765
K G SWI V+NQ+ F D ++ +L + R+ V + S+ +
Sbjct: 551 KEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVN 605
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 214/460 (46%), Gaps = 92/460 (20%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM- 93
H+ N + + K G VEEA +F +++V + +MI+ +A + + A + F +M
Sbjct: 45 HILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 94 ----------------SQRNL--VSWNTMIAG-----------YLHNSM----------V 114
S RN+ +++ ++ G Y+ N+M +
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 115 EEASKLFDVMPERDNFSWALMITCYTRKGK----LEKARELL----ELVPDKLD-----T 161
E A +F + +++ +W +IT +T G L+ +++L E+ P + +
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 162 ACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
A ++V G K+ S ++ F +L NS+L Y + G + A H+F +M +K
Sbjct: 224 ASIDSVTTG--KQIHASVIKRGFQ----SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 277
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTML----------CGFARH 267
++++WN ++S S D S A +F++ + PN ++ +++ CG H
Sbjct: 278 DLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 336
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM-PHKDGVSWTTIINGY 326
G+I RR F+ KNV NA+I YA+ I ++ ++F ++ ++ VSWT+++ GY
Sbjct: 337 GRIF--RRGFN----KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGY 390
Query: 327 IRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR-----D 377
G EA E++++M I + A++S G V++ K FN + + D
Sbjct: 391 GSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPD 450
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMI 416
+N ++ ++G++ EA +L +MP K + +W ++
Sbjct: 451 RDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 198/451 (43%), Gaps = 50/451 (11%)
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC 163
+I Y +VEEA LFD MP+RD +W MIT Y +A E C
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWE------------C 98
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
++ ++ +F+ + + + +K +++Y +++ G K+G+ + A N+
Sbjct: 99 FHEMVKQGTSPNEFTLSSVLKSCRNMK-VLAYGALVHGVVV--KLGMEGSLYVDNAMMNM 155
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
+ S + +A +F I N V+W T++ GF G +++ M +
Sbjct: 156 YA--------TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLE 207
Query: 284 N----------VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-WTTIINGYIRVGKL 332
N V +A I + QI +V IK + + +I++ Y R G L
Sbjct: 208 NAEVTPYCITIAVRASASIDSVTTGKQIHASV---IKRGFQSNLPVMNSILDLYCRCGYL 264
Query: 333 DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI--CW--NSMIAGF 388
EA+ +++M KD+ L+S L ++ EA MF + ++ + C+ S++A
Sbjct: 265 SEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAAC 323
Query: 389 CQSGRMDEALDL----FRQMPKKNSVSWNTMISGYAQAGQMDSAENIF-QAMEERNIVSW 443
++ L FR+ KN N +I YA+ G + ++ +F + ++ RN+VSW
Sbjct: 324 ANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSW 383
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
S++ G+ + +A++ M G +PD+ F + G + +++
Sbjct: 384 TSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN-VME 442
Query: 504 SGY-IN-DLFVSNALIAMYAKCGRVESAEQV 532
S Y IN D + N ++ + + G++ A ++
Sbjct: 443 SEYGINPDRDIYNCVVDLLGRAGKIGEAYEL 473
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 206/458 (44%), Gaps = 61/458 (13%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
+++ N ++S F K G + +AR LFD+M R++V+W MI GY ++ A + F M
Sbjct: 45 HILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 125 -----PERDNFSWALMITCYTRKGKLEKARELLELVPDKL----DTACWNAVIAGYAKKG 175
P S +++ +C R K+ L+ V KL NA++ YA
Sbjct: 104 KQGTSPNEFTLS-SVLKSC--RNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 176 QFSDAE-KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMV 230
+A +F + VK+ V++ +++ G+T G L +++M AE + V
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 231 SGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
+ +++ +Q+ + N ++L + R G ++EA+ F M K+++
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV----SWTTIINGYIRVGKLDEAREVYNQM 342
+WN +I+ + EA+ +F + + V ++T+++ + L+ ++++ ++
Sbjct: 281 TWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 343 ----PCKDIAAETALMSGLIQTGRVDEASKMFNQL-STRDTICWNSMIAGFCQSGRMDEA 397
K++ AL+ + G + ++ ++F ++ R+ + W SM+ G+ G EA
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399
Query: 398 LDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN 453
++LF +M + + + + ++S AG ++ F ME ++ + I + +
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459
Query: 454 SLYFDALKSLVLMGREGK-------------KPDQSTF 478
L+GR GK KPD+ST+
Sbjct: 460 -----------LLGRAGKIGEAYELVERMPFKPDESTW 486
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 122/255 (47%), Gaps = 19/255 (7%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V NL NS++ ++ + G +S+A+ F +M ++L++WNT+I+ L S EA
Sbjct: 239 VIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEA 297
Query: 118 SKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAG 170
+F + + +++ ++ L ++L + + + NA+I
Sbjct: 298 LLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDM 357
Query: 171 YAKKGQFSDAEKVFN-LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VS 225
YAK G D+++VF ++ ++LVS+ SM+ GY +G A+ F+KM + +
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 226 WNLMVSGFVNSGDLSSARQLF-----EKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM 280
+ ++S ++G + + F E NP+ + ++ R GKI EA L + M
Sbjct: 418 FMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Query: 281 PCK-NVVSWNAMIAA 294
P K + +W A++ A
Sbjct: 478 PFKPDESTWGAILGA 492
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 51/199 (25%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM-SQRNLVSWNTMIAGY------- 108
R+F +KN+ N++I ++AK G I D++++F ++ +RNLVSW +M+ GY
Sbjct: 338 RIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Query: 109 ----------------------------LHNSMVEEASKLFDVM-------PERDNFSWA 133
H +VE+ K F+VM P+RD ++
Sbjct: 398 EAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYN-- 455
Query: 134 LMITCYTRKGKLEKARELLELVPDKLDTACWNAVIA---GYAKKGQFSD--AEKVFNLMP 188
++ R GK+ +A EL+E +P K D + W A++ + G S A KV L P
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKP 515
Query: 189 VKDLVSYNSMLAGYTQNGK 207
K + +Y + Y GK
Sbjct: 516 -KMVGTYVMLSYIYAAEGK 533
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/615 (26%), Positives = 311/615 (50%), Gaps = 65/615 (10%)
Query: 166 AVIAGYAKKGQFSDAEKVFNLMPVKDLV-----SYNSMLAGYTQNGKMGLALHFFEKMAE 220
A + A++ + +++ M K + + S++ Y + G M A+ F +E
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 221 KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRL 276
++V +N ++SGFV +G A + + ++ P+ ++ ++L G + ++++ +++
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKV 182
Query: 277 --------FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD-GVSWTTIINGYI 327
FDS + + ++ +Y++ + +++A K+F ++P +D V W ++NGY
Sbjct: 183 HGLAFKLGFDS----DCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 328 RVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
++ + ++A V+++M + + +R TI S+++
Sbjct: 239 QIFRFEDALLVFSKMREEGVGV-------------------------SRHTI--TSVLSA 271
Query: 388 FCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSW 443
F SG +D + K S V N +I Y ++ ++ A +IF+AM+ER++ +W
Sbjct: 272 FTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTW 331
Query: 444 NSLITGFLQNSLYFDALKSLVLMGR---EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEY 500
NS++ + D +L L R G +PD T + G ++H Y
Sbjct: 332 NSVLC---VHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGY 388
Query: 501 ILKSGYIN----DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
++ SG +N + F+ N+L+ MY KCG + A VF ++ D SWN +I+GY +
Sbjct: 389 MIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSC 448
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
A F M V PD++TF+G+L ACSH+G N+G + M + I P ++HY+
Sbjct: 449 GELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYA 508
Query: 617 CLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPH 676
C++D+LGR +LEEA+ + + N +W S+L +CR+H N ++ A RL ELEP
Sbjct: 509 CVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPE 568
Query: 677 NASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLR 736
+ Y+ +SN++ EAG++EEV +R MR + K PGCSWI ++N + F + +
Sbjct: 569 HCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPE 628
Query: 737 PETIQIILNAISAHM 751
++I L+ + +HM
Sbjct: 629 FKSIHDWLSLVISHM 643
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 182/416 (43%), Gaps = 55/416 (13%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G + AV VF + +++ YN++IS F NG DA + + +M ++
Sbjct: 108 KCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPS 166
Query: 108 YLHNSMVEEASKL-------FDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLD 160
L S E S + F + + D + + ++T Y++ +E A+++ + +PD+ D
Sbjct: 167 LLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDD 226
Query: 161 TACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKM--GLALHF 214
+ WNA++ GY++ +F DA VF+ M + + + S+L+ +T +G + G ++H
Sbjct: 227 SVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG 286
Query: 215 F--EKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITE 272
+ + ++V N ++ + S L A +FE + + +W ++LC G
Sbjct: 287 LAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDG 346
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKL 332
LF+ M C + D V+ TT++ R+ L
Sbjct: 347 TLALFERMLCSGI---------------------------RPDIVTLTTVLPTCGRLASL 379
Query: 333 DEAREVYNQMPCKDIA--------AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
+ RE++ M + +LM ++ G + +A +F+ + +D+ WN M
Sbjct: 380 RQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIM 439
Query: 385 IAGFCQSGRMDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
I G+ + ALD+F R K + +++ ++ + +G ++ N ME
Sbjct: 440 INGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQME 495
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 135/342 (39%), Gaps = 53/342 (15%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H L + + G + N I GK +EEA +F ++L T+NS++ V G
Sbjct: 285 HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDH 344
Query: 84 SDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKG 143
LF++M L + + + L V+P TC R
Sbjct: 345 DGTLALFERM---------------LCSGIRPDIVTLTTVLP-----------TC-GRLA 377
Query: 144 KLEKAREL--LELVPDKLDTACWNAVIAG-----YAKKGQFSDAEKVFNLMPVKDLVSYN 196
L + RE+ +V L+ N I Y K G DA VF+ M VKD S+N
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 437
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV---------SGFVNSGD--LSSARQL 245
M+ GY LAL F M V + SGF+N G L+ +
Sbjct: 438 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV 497
Query: 246 FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP-CKNVVSWNAMIAAYA----QDLQ 300
+ +P + + V + G R K+ EA L S P C N V W +++++ +DL
Sbjct: 498 YNILPTSDHYACVIDMLG--RADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLA 555
Query: 301 IDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
+ +L P G + + N Y+ GK +E +V + M
Sbjct: 556 LVAGKRLHELEPEHCG-GYVLMSNVYVEAGKYEEVLDVRDAM 596
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL 120
N N +NS++ ++ K G + DAR +FD M ++ SWN MI GY S E A +
Sbjct: 396 NRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDM 455
Query: 121 FDVM----PERDNFSWALMITCYTRKGKLEKARELL---ELVPDKLDTA-CWNAVIAGYA 172
F M + D ++ ++ + G L + R L E V + L T+ + VI
Sbjct: 456 FSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLG 515
Query: 173 KKGQFSDAEKVFNLMPVKD-LVSYNSMLAGYTQNGKMGLALHFFEKMAE---KNVVSWNL 228
+ + +A ++ P+ D V + S+L+ +G LAL +++ E ++ + L
Sbjct: 516 RADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVL 575
Query: 229 MVSGFVNSG------DLSSA--RQLFEKIPNPNAVSWVTM 260
M + +V +G D+ A +Q +K P SW+ +
Sbjct: 576 MSNVYVEAGKYEEVLDVRDAMRQQNVKKTP---GCSWIVL 612
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 240/452 (53%), Gaps = 33/452 (7%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIR 328
A R+F + NV+ +NAMI Y+ E++ F M + D ++ ++
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
+ L + V+ + LI+TG F++L ++ +
Sbjct: 115 LSDLRFGKCVHGE---------------LIRTG--------FHRLGKIRI----GVVELY 147
Query: 389 CQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
GRM +A +F +M ++N V WN MI G+ +G ++ ++F+ M ER+IVSWNS+I+
Sbjct: 148 TSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMIS 207
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN 508
+ +AL+ M +G PD++T G +H SG
Sbjct: 208 SLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFK 267
Query: 509 DLF-VSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQM 567
D V NAL+ Y K G +E+A +F ++ +++SWN+LISG A+NG F M
Sbjct: 268 DFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAM 327
Query: 568 LSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
+ E +V P++ TF+G+L+ CS+ G +G +LF M+E F +E EHY +VDL+ R G
Sbjct: 328 IEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSG 387
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSN 686
R+ EAF ++ M V ANA +WGSLL ACR H ++++ E AAM L ++EP N+ NY+ LSN
Sbjct: 388 RITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSN 447
Query: 687 MHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
++AE GRW++VE++R LM+ R K G S I
Sbjct: 448 LYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 207/459 (45%), Gaps = 55/459 (11%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
G L + A RVFS+ + N++ +N+MI ++ G ++ F M R + W
Sbjct: 47 GSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI--WADE-- 102
Query: 107 GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNA 166
Y + +++ S L D+ + L+ T + R GK+
Sbjct: 103 -YTYAPLLKSCSSLSDLRFGK-CVHGELIRTGFHRLGKIRI------------------G 142
Query: 167 VIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSW 226
V+ Y G+ DA+KVF+ M +++V +N M+ G+ +G + LH F++M+E+++VSW
Sbjct: 143 VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSW 202
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
N M+S G A +LF ++ +P+ + VT+L A G + + + +
Sbjct: 203 NSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAES 262
Query: 283 KN-----VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEARE 337
+ NA++ Y + ++ A +F KM ++ VSW T+I+G GK + +
Sbjct: 263 SGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGID 322
Query: 338 VYNQMPCK-DIAAETALMSGLIQ----TGRVDEASKMFNQLSTR-----DTICWNSMIAG 387
+++ M + +A A G++ TG+V+ ++F + R T + +M+
Sbjct: 323 LFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDL 382
Query: 388 FCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
+SGR+ EA + MP N+ W +++S G + AE AME I NS
Sbjct: 383 MSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAE--VAAMELVKIEPGNSG 440
Query: 447 ITGFLQNSLY--------FDALKSLVLMGREGKKPDQST 477
L N LY + +++L+ R K QST
Sbjct: 441 NYVLLSN-LYAEEGRWQDVEKVRTLMKKNRLRKSTGQST 478
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 83/185 (44%), Gaps = 5/185 (2%)
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
D A +F ++ N++ +N++I + ++L M G D+ T+
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWN 545
+ G +H ++++G+ + ++ +Y GR+ A++VF + +++ WN
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+I G+ +G FKQM + V++ M+S+ S G + L+LF C + D
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCGRDREALELF-CEMID 227
Query: 606 FAIEP 610
+P
Sbjct: 228 QGFDP 232
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 262 bits (669), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 294/548 (53%), Gaps = 32/548 (5%)
Query: 245 LFEK-IPNPNAVSWVTMLCGFARHGKITEARRLFDSM------PCKNVVSWNAMIAAYAQ 297
LF + + + SW +++ AR G EA F SM P ++ S+ I A +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS--SFPCAIKACSS 88
Query: 298 DLQI----DEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
I + F+ D + +I Y GKL++AR+V++++P ++I + T++
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 354 MSGLIQTGRVDEASKMFNQL-----STRDTICWNSM----IAGFCQ---SGRMDEALDLF 401
+ G G +A +F L D + +SM + C + + E++ F
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 402 ---RQMPKKNSVSWNTMISGYAQAGQ--MDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
R + SV NT++ YA+ G+ + A IF + +++ VS+NS+++ + Q+ +
Sbjct: 209 VIKRGFDRGVSVG-NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 457 FDALKSLV-LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNA 515
+A + L+ + + T ++G +H+ +++ G +D+ V +
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 516 LIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
+I MY KCGRVE+A + F ++ ++ SW ++I+GY ++G+A +A + F M+ V P+
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 576 QVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
+TF+ +L+ACSHAGL +G F M F +EP EHY C+VDLLGR G L++A++++
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 636 RGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
+ M +K ++ +W SLL ACR+HKN+E+ E + RL EL+ N Y+ LS+++A+AGRW+
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Query: 696 EVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDKF 755
+VER+R++M+++ K PG S +E+ ++ FL D + E I L ++ + +
Sbjct: 508 DVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567
Query: 756 NVFNMQSV 763
V N SV
Sbjct: 568 YVSNTSSV 575
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 196/415 (47%), Gaps = 41/415 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVM 124
++ +++I +++ GK+ DAR++FD++ +RN+VSW +MI GY N +A LF D++
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 125 PER---------DNFSWALMITCYTR---KGKLEKARELLELVPDKLDTACWNAVIAGYA 172
+ D+ +I+ +R KG E + + N ++ YA
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229
Query: 173 KKGQ--FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
K G+ + A K+F+ + KD VSYNS+++ Y Q+G A F ++ + VV++N +
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAIT 289
Query: 231 SGFV-----NSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMP 281
V +SG L + + +++ + + +++ + + G++ AR+ FD M
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK 349
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGKLDEARE 337
KNV SW AMIA Y +A++LF M + +++ +++ G E
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
Query: 338 VYNQMPCKDIAAETAL-----MSGLI-QTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQ 390
+N M + E L M L+ + G + +A + ++ + D+I W+S++A C+
Sbjct: 410 WFNAMKGR-FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA-CR 467
Query: 391 SGRMDEALDL----FRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
+ E ++ ++ N + + YA AG+ E + M+ R +V
Sbjct: 468 IHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 166/360 (46%), Gaps = 43/360 (11%)
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQ---------NGK 207
DK D WN+VIA A+ G ++A F+ M L S + +GK
Sbjct: 37 DKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGK 96
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARH 267
F VS L+V + G L AR++F++IP N VSW +M+ G+ +
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVM-YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 268 GKITEARRLF----------------DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-IK 310
G +A LF DSM +V+S + + A + E++ F IK
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG----LTESIHSFVIK 211
Query: 311 MPHKDGVS-WTTIINGYIRVGK--LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEAS 367
GVS T+++ Y + G+ + AR++++Q+ KD + ++MS Q+G +EA
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 368 KMF-----NQLSTRDTICWNSMIAGFCQSG--RMDEAL--DLFRQMPKKNSVSWNTMISG 418
++F N++ T + I ++++ SG R+ + + + R + + + ++I
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
Y + G++++A F M+ +N+ SW ++I G+ + AL+ M G +P+ TF
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 26/261 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN---- 102
G G V A ++F + K+ V+YNS++SV+A++G ++A ++F ++ + +V++N
Sbjct: 231 GGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITL 290
Query: 103 -TMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPD 157
T++ H+ + + D + E D +I Y + G++E AR+ + + +
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 158 KLDTACWNAVIAGYAKKGQFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALH 213
K + W A+IAGY G + A ++F M + +++ S+LA + G
Sbjct: 351 K-NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
Query: 214 FFEKM-----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTMLCGFARH 267
+F M E + + MV +G L A L +++ P+++ W ++L H
Sbjct: 410 WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Query: 268 GKITEAR----RLF--DSMPC 282
+ A RLF DS C
Sbjct: 470 KNVELAEISVARLFELDSSNC 490
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 263/472 (55%), Gaps = 24/472 (5%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTT-IINGY 326
GK+ +AR++FD MP +++ MI A A++ E++ F +M +KDG+ I+
Sbjct: 65 GKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREM-YKDGLKLDAFIVPSL 123
Query: 327 IRVGKLDEAREVYNQMPCKDIA----AETALMSGLI----QTGRVDEASKMFNQLSTRDT 378
++ + RE + C + ++ ++S LI + G V A K+F+ L +D
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL 183
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQA 434
+ +N+MI+G+ + + DEAL+L + M K + ++WN +ISG++ + I +
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILEL 243
Query: 435 M----EERNIVSWNSLITGFL---QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
M + ++VSW S+I+G + QN FDA K ++ G P+ +T
Sbjct: 244 MCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQML---THGLYPNSATIITLLPACTT 300
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSL 547
+ G ++H Y + +G + FV +AL+ MY KCG + A +F +++NS+
Sbjct: 301 LAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSM 360
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFA 607
I YA +G A +A + F QM + D +TF +L+ACSHAGL + G +LF M +
Sbjct: 361 IFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYR 420
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAA 667
I P EHY+C+VDLLGR G+L EA+ +++ M ++ + +WG+LL ACR H N+E+ AA
Sbjct: 421 IVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAA 480
Query: 668 MRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
L+ELEP N+ N + L++++A AG WE V R++ +++ KR + G SW+E
Sbjct: 481 KHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 203/476 (42%), Gaps = 86/476 (18%)
Query: 62 TIHKNLVTYN---------SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNS 112
+H +LVT +++ + + GK+ DAR++FD+M +R++ MI N
Sbjct: 37 VLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNG 96
Query: 113 MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL------------D 160
+E+ F R+ + L + + L+ +R LL+ K+ D
Sbjct: 97 YYQESLDFF-----REMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESD 151
Query: 161 TACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA- 219
+++I Y+K G+ +A KVF+ + +DLV +N+M++GY N + AL+ + M
Sbjct: 152 AFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 220 ---EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR------ 266
+ +V++WN ++SGF + + ++ E + P+ VSW +++ G
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 267 ----------HGKITEARRLFDSMPCKNVVSW-----------------------NAMIA 293
HG + + +P +++ +A++
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLD 331
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK----DIAA 349
Y + I EA+ LF K P K V++ ++I Y G D+A E+++QM D
Sbjct: 332 MYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLT 391
Query: 350 ETALMSGLIQTGRVDEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQM 404
TA+++ G D +F + + I + M+ ++G++ EA ++ + M
Sbjct: 392 FTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM 451
Query: 405 P-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDA 459
+ + W +++ G M+ A + + E + NS G L SLY +A
Sbjct: 452 RMEPDLFVWGALLAACRNHGNMELARIAAKHLAE--LEPENS-GNGLLLTSLYANA 504
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 141/315 (44%), Gaps = 47/315 (14%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNT 103
K G+V A +VFS+ ++LV +N+MIS +A N + +A L M + ++++WN
Sbjct: 164 KFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNA 223
Query: 104 MIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDKL 159
+I+G+ H E+ S++ ++M + D SW +I+ + EKA + + +
Sbjct: 224 LISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQM---- 279
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSY---NSMLAGYTQNGKMGLALHFFE 216
G + ++ + L+P ++Y + GY+ GL H F
Sbjct: 280 ------------LTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV--VTGLEDHGFV 325
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
+ A ++ + G +S A LF K P V++ +M+ +A HG +A L
Sbjct: 326 RSA---------LLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVEL 376
Query: 277 FDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV-----SWTTIINGYI 327
FD M + +++ A++ A + D LF+ M +K + + +++
Sbjct: 377 FDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLG 436
Query: 328 RVGKLDEAREVYNQM 342
R GKL EA E+ M
Sbjct: 437 RAGKLVEAYEMIKAM 451
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM- 93
H F ++ + GK G + EA+ +F T K VT+NSMI +A +G A +LFD+M
Sbjct: 322 HGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQME 381
Query: 94 ---SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKL 145
+ + +++ ++ H + + LF +M + +A M+ R GKL
Sbjct: 382 ATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKL 441
Query: 146 EKARELLELVPDKLDTACWNAVIAGYAKKG 175
+A E+++ + + D W A++A G
Sbjct: 442 VEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G LH +++ SG ++ L+ Y +CG+V A +VF + D+ +I A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
NGY E+ F++M + + D +L A S L + + C+V F+ E A
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 614 HYSCLVDLLGRMGRLEEAFNV 634
S L+D+ + G + A V
Sbjct: 154 IVSSLIDMYSKFGEVGNARKV 174
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 231/449 (51%), Gaps = 26/449 (5%)
Query: 291 MIAAYAQDLQIDEAVKLFIKMPHKDGVS---WTTIINGYIRVGKLDEAREVYNQMPCKDI 347
+I ++ ++D A K+F + ++ W + GY R G +A VY M C
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLC--- 229
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
I+ G + + + +D + GR A + ++ K
Sbjct: 230 --------SFIEPGNFSISVALKACVDLKDL-----------RVGRGIHA-QIVKRKEKV 269
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+ V +N ++ Y ++G D A +F M ERN+V+WNSLI+ + + M
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
E +T G ++H ILKS D+ + N+L+ MY KCG VE
Sbjct: 330 EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVE 389
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
+ +VF + DL SWN +++ YA+NG E F+ M+ V PD +TF+ +LS CS
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLW 647
GL GL LF+ M +F + P EHY+CLVD+LGR G+++EA V+ M K +A +W
Sbjct: 450 DTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIW 509
Query: 648 GSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
GSLL +CR+H N+ +GE AA L LEPHN NY+ +SN++A+A W+ V+++R +M+ +
Sbjct: 510 GSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQR 569
Query: 708 RAGKLPGCSWIEVQNQIQCFLSDDSGRLR 736
K GCSW++V+++IQ F++ R
Sbjct: 570 GVKKEAGCSWVQVKDKIQIFVAGGGYEFR 598
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 150/306 (49%), Gaps = 22/306 (7%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
V YN ++ ++ ++G DAR++FD MS+RN+V+WN++I+ V E LF M E
Sbjct: 272 VVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEE 331
Query: 128 -DNFSWALMITCY---TRKGKLEKARELLELV---PDKLDTACWNAVIAGYAKKGQFSDA 180
FSWA + T +R L +E+ + +K D N+++ Y K G+ +
Sbjct: 332 MIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYS 391
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNS 236
+VF++M KDL S+N ML Y NG + ++ FE M E V +++ ++SG ++
Sbjct: 392 RRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDT 451
Query: 237 GDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNA 290
G LFE++ +P + ++ R GKI EA ++ ++MP K S W +
Sbjct: 452 GLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGS 511
Query: 291 MIAA--YAQDLQIDE--AVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKD 346
++ + ++ + E A +LF+ PH G ++ + N Y D ++ M +
Sbjct: 512 LLNSCRLHGNVSVGEIAAKELFVLEPHNPG-NYVMVSNIYADAKMWDNVDKIREMMKQRG 570
Query: 347 IAAETA 352
+ E
Sbjct: 571 VKKEAG 576
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 193/413 (46%), Gaps = 37/413 (8%)
Query: 62 TIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS---WNTMIAGYLHNSMVEEAS 118
++ N + +I++F+ ++ AR++FD ++ +L++ W M GY N +A
Sbjct: 162 SLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDAL 221
Query: 119 KLFDVM----PERDNFSWALMITCYTRKGKLEKARELLELV---PDKLDTACWNAVIAGY 171
++ M E NFS ++ + L R + + +K+D +N ++ Y
Sbjct: 222 IVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLY 281
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV-VSWNLM- 229
+ G F DA KVF+ M +++V++NS+++ ++ ++ + F KM E+ + SW +
Sbjct: 282 MESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLT 341
Query: 230 --------VSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
V+ + ++ + Q+ + P+ +++ + + G++ +RR+FD M
Sbjct: 342 TILPACSRVAALLTGKEIHA--QILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEARE 337
K++ SWN M+ YA + I+E + LF M DG+++ +++G G +
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 459
Query: 338 VYNQMPCK-----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-CWNSMIAGFCQS 391
++ +M + + L+ L + G++ EA K+ + + + W S++
Sbjct: 460 LFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
Query: 392 GRMD----EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
G + A +LF P N ++ + + YA A D+ + I + M++R +
Sbjct: 520 GNVSVGEIAAKELFVLEP-HNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGV 571
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWN 102
GK G+VE + RVF + K+L ++N M++ +A NG I + LF+ M + + +++
Sbjct: 383 GKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFV 442
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELVPD 157
+++G + E LF+ M S +A ++ R GK+++A +++E +P
Sbjct: 443 ALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPF 502
Query: 158 KLDTACWNAVIAGYAKKGQFS----DAEKVFNLMP 188
K + W +++ G S A+++F L P
Sbjct: 503 KPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEP 537
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/468 (30%), Positives = 249/468 (53%), Gaps = 43/468 (9%)
Query: 328 RVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNS 383
R G + EA+ + ++ D+ + L++ LI + G V+ A ++F+ + R + WN+
Sbjct: 73 RNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 132
Query: 384 MIAGFCQSGRMDEALDLFRQM----------------------------PKKNSVSWNT- 414
MI + ++ EALD+F +M K + +S T
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 415 ----------MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
++ YA+ G + A +F++M++++ V+W+S++ G++QN Y +AL
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
R + +Q T G Q+H I KSG+ +++FV+++ + MYAKCG
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 525 RVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
+ + +F+ ++ +L WN++ISG+A + E F++M + + P++VTF +LS
Sbjct: 313 SLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
Query: 585 ACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANA 644
C H GL +G FK M + + P HYSC+VD+LGR G L EA+ +++ + A
Sbjct: 373 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA 432
Query: 645 GLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLM 704
+WGSLL +CRV+KNLE+ E AA +L ELEP NA N++ LSN++A +WEE+ + R L+
Sbjct: 433 SIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLL 492
Query: 705 RDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
RD K+ G SWI++++++ F +SG R I L+ + R
Sbjct: 493 RDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFR 540
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 185/423 (43%), Gaps = 63/423 (14%)
Query: 40 NQQIIH-----LGKLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLF 90
N+ ++H + G V EA I +L N +I+ ++K G + ARQ+F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 91 DKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPERDNFS----WALMITCYTRKGKL 145
D M +R+LVSWNTMI Y N M EA +F ++ E FS +++ C L
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 146 EKARELLELVPDKLDTACW--NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
E + V +D + A++ YAK G DA +VF M K V+++SM+AGY
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239
Query: 204 QNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN------ 253
QN AL + + E+N + + ++ N L +Q+ I
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 254 -AVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP 312
A S V M +A+ G + E+ +F + KN+ WN +I+ +A+ + E + LF KM
Sbjct: 300 VASSAVDM---YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM- 355
Query: 313 HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQ 372
+DG+ + ++L+S TG V+E + F
Sbjct: 356 QQDGMHPNEV--------------------------TFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 373 LSTR-----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAGQMD 426
+ T + + ++ M+ ++G + EA +L + +P + S W ++++ ++
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLE 449
Query: 427 SAE 429
AE
Sbjct: 450 LAE 452
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H + S G +VF + + K G + E+ +FS KNL +N++IS FAK+ +
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 345
Query: 84 SDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WAL 134
+ LF+KM Q N V+++++++ H +VEE + F +M S ++
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 405
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAG--YAKKGQFSD--AEKVFNLMP 188
M+ R G L +A EL++ +P + W +++A K + ++ AEK+F L P
Sbjct: 406 MVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEP 463
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/510 (31%), Positives = 260/510 (50%), Gaps = 18/510 (3%)
Query: 249 IPNPNAVSWVTML------CGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQID 302
+P+ ++S T L C R K A + + V + + A ++
Sbjct: 16 MPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN 75
Query: 303 EAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM---SGLIQ 359
A +F ++ HK+ W TII G+ R + A ++ M C + + + S
Sbjct: 76 YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 360 TGRVDEASK-------MFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSW 412
GR+ +A + + D+ N+M+ + G + EA +F M + V+W
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
N+MI G+A+ G +D A+N+F M +RN VSWNS+I+GF++N + DAL M + K
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
PD T + G +HEYI+++ + + V ALI MY KCG +E V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F L WNS+I G A NG+ A F ++ + PD V+FIG+L+AC+H+G
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLG 652
++ + F+ M E + IEP +HY+ +V++LG G LEEA +++ M V+ + +W SLL
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLS 435
Query: 653 ACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
ACR N+E+ + AA L +L+P Y+ LSN +A G +EE R+LM++++ K
Sbjct: 436 ACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKE 495
Query: 713 PGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
GCS IEV ++ F+S G P++ +I
Sbjct: 496 VGCSSIEVDFEVHEFIS--CGGTHPKSAEI 523
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 154/321 (47%), Gaps = 20/321 (6%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
F +N + G + EA R+F I ++V +NSMI FAK G I A+ LFD+M QR
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 97 NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL 152
N VSWN+MI+G++ N ++A +F M E+ D F+ ++ G E+ R +
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 153 ELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMG 209
E + +L++ A+I Y K G + VF P K L +NSM+ G NG
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEE 341
Query: 210 LALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLF-----EKIPNPNAVSWVTM 260
A+ F ++ E + VS+ +++ +SG++ A + F + + P+ + M
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 261 LCGFARHGKITEARRLFDSMPC-KNVVSWNAMIAAYAQDLQID---EAVKLFIKMPHKDG 316
+ G + EA L +MP ++ V W+++++A + ++ A K K+ +
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDET 461
Query: 317 VSWTTIINGYIRVGKLDEARE 337
+ + N Y G +EA E
Sbjct: 462 CGYVLLSNAYASYGLFEEAVE 482
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 180/389 (46%), Gaps = 54/389 (13%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF--------DVMPERDNFSWALMIT 137
A +F +++ +N WNT+I G+ +S E A +F V P+R ++ +
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSVFK 134
Query: 138 CYTRKGKLEKARELLELVPDKL---DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVS 194
Y R G+ R+L +V + D+ N ++ Y G +A ++F M D+V+
Sbjct: 135 AYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVA 194
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA----RQLFEKIP 250
+NSM+ G+ + G + A + F++M ++N VSWN M+SGFV +G A R++ EK
Sbjct: 195 WNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDV 254
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
P+ + V++L A G + R + + + +N N+++
Sbjct: 255 KPDGFTMVSLLNACAYLGASEQGRWIHEYI-VRNRFELNSIVV----------------- 296
Query: 311 MPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF 370
T +I+ Y + G ++E V+ P K ++ +++ GL G + A +F
Sbjct: 297 ---------TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLF 347
Query: 371 NQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-----WNTMISGYAQ 421
++L D++ + ++ SG + A + FR M +K + + M++
Sbjct: 348 SELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGG 407
Query: 422 AGQMDSAENIFQAME-ERNIVSWNSLITG 449
AG ++ AE + + M E + V W+SL++
Sbjct: 408 AGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 188/420 (44%), Gaps = 38/420 (9%)
Query: 55 AVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM--------SQRNLVSWNTMIA 106
A VF+ HKN +N++I F+++ A +F M QR +++ ++
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSVFK 134
Query: 107 GYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKA-RELLELVPDKLDT 161
Y + +L ++ E D+F M+ Y G L +A R L ++ D
Sbjct: 135 AYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI--GFDV 192
Query: 162 ACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
WN++I G+AK G A+ +F+ MP ++ VS+NSM++G+ +NG+ AL F +M EK
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 222 NVVSWNLMVSGFVNS----GDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKITEA 273
+V + +N+ G R + E I N++ ++ + + G I E
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 274 RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRV 329
+F+ P K + WN+MI A + + A+ LF ++ D VS+ ++
Sbjct: 313 LNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHS 372
Query: 330 GKLDEAREVYNQMPCK-----DIAAETALMSGLIQTGRVDEASKMFNQLST-RDTICWNS 383
G++ A E + M K I T +++ L G ++EA + + DT+ W+S
Sbjct: 373 GEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSS 432
Query: 384 MIAGFCQSGRMD---EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
+++ + G ++ A +++ + + + + YA G + A M+ER +
Sbjct: 433 LLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQM 492
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 152/313 (48%), Gaps = 23/313 (7%)
Query: 160 DTACWNAVIA-GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
DT + V+A A + A VF + K+ +N+++ G++++ +A+ F M
Sbjct: 56 DTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDM 115
Query: 219 ------AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARHG 268
+ +++ + + G RQL + ++ TML + G
Sbjct: 116 LCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCG 175
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIR 328
+ EA R+F M +VV+WN+MI +A+ ID+A LF +MP ++GVSW ++I+G++R
Sbjct: 176 CLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVR 235
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGR---VDEASKMFNQLSTRDTICWNSMI 385
G+ +A +++ +M KD+ + M L+ E + ++ R+ NS++
Sbjct: 236 NGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIV 295
Query: 386 AG-----FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME---- 436
+C+ G ++E L++F PKK WN+MI G A G + A ++F +E
Sbjct: 296 VTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGL 355
Query: 437 ERNIVSWNSLITG 449
E + VS+ ++T
Sbjct: 356 EPDSVSFIGVLTA 368
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 160/373 (42%), Gaps = 66/373 (17%)
Query: 26 LTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVF------SNTIHKNLVTYNSMISVFAK 79
L I K+ F N I + E A+ +F S ++ +TY S+ + +
Sbjct: 79 LVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGR 138
Query: 80 NGKISDARQL-----------------------------------FDKMSQRNLVSWNTM 104
G+ D RQL F M ++V+WN+M
Sbjct: 139 LGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSM 198
Query: 105 IAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA----RELLE--LVPD- 157
I G+ ++++A LFD MP+R+ SW MI+ + R G+ + A RE+ E + PD
Sbjct: 199 IMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDG 258
Query: 158 ----KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
L AC G +++G++ V N + +V +++ Y + G + L+
Sbjct: 259 FTMVSLLNAC---AYLGASEQGRWIHEYIVRNRFELNSIV-VTALIDMYCKCGCIEEGLN 314
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGK 269
FE +K + WN M+ G N+G A LF ++ P++VS++ +L A G+
Sbjct: 315 VFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
Query: 270 ITEARRLFDSMPCKNVVS-----WNAMIAAYAQDLQIDEAVKLFIKMP-HKDGVSWTTII 323
+ A F M K ++ + M+ ++EA L MP +D V W++++
Sbjct: 375 VHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
Query: 324 NGYIRVGKLDEAR 336
+ ++G ++ A+
Sbjct: 435 SACRKIGNVEMAK 447
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 258 bits (658), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 200/729 (27%), Positives = 342/729 (46%), Gaps = 71/729 (9%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ + + +N+ + +IS +A GK + + ++F +++R++ WN++I + N +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARS 109
Query: 118 SKLFDVM----PERDNFSWALMITC-----YTRKGKLEKARELLELVPDKLDTACWNAVI 168
F M D+F+ ++++ + G L D+ +TA + +
Sbjct: 110 LCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR-NTAVGASFV 168
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM--AEKNVVSW 226
Y+K G DA VF+ MP +D+V++ ++++G+ QNG+ L + KM A +V
Sbjct: 169 YFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKP 228
Query: 227 N--LMVSGF---VNSGDLSSARQLFE-KIPNPNAVSWV---TMLCGFARHGKITEARRLF 277
N + GF N G L R L + N A S +M +++ G +EA F
Sbjct: 229 NPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSF 288
Query: 278 DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLD 333
+ +++ SW ++IA+ A+ ++E+ +F +M H DGV + +IN ++ +
Sbjct: 289 RELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVP 348
Query: 334 EARE----VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAGF 388
+ + V D +L+S + + A K+F ++S + WN+M+ G+
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 389 CQSGRMDEALDLFRQMPK----------------------------------KNSVSW-- 412
+ + ++LFR++ K S+
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI 468
Query: 413 ---NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
N++I Y + G + A +F + N+++WN++I ++ A+ M E
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSE 527
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
KP T + G +H YI ++ + +L +S ALI MYAKCG +E +
Sbjct: 528 NFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKS 587
Query: 530 EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHA 589
++F A D + WN +ISGY ++G A F QM +V P TF+ +LSAC+HA
Sbjct: 588 RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHA 647
Query: 590 GLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
GL QG LF M + ++P +HYSCLVDLL R G LEEA + V M + +WG+
Sbjct: 648 GLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGT 706
Query: 650 LLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
LL +C H E+G A R +P N YI L+NM++ AG+WEE ER R +MR+
Sbjct: 707 LLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGV 766
Query: 710 GKLPGCSWI 718
GK G S +
Sbjct: 767 GKRAGHSVV 775
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 19/254 (7%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL- 98
N I GK+G + A R+F N++T+N+MI+ + + A LFD+M N
Sbjct: 472 NSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFK 530
Query: 99 ---VSWNTMIAGYLHNSMVEEASKLFDVMPERD---NFSW-ALMITCYTRKGKLEKAREL 151
++ T++ ++ +E + + E + N S A +I Y + G LEK+REL
Sbjct: 531 PSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSREL 590
Query: 152 LELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGK 207
+ ++ D CWN +I+GY G A +F+ M D+ ++ ++L+ T G
Sbjct: 591 FD-AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGL 649
Query: 208 MGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTMLC 262
+ F KM + N+ ++ +V SG+L A +P +P+ V W T+L
Sbjct: 650 VEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLS 709
Query: 263 GFARHGKITEARRL 276
HG+ R+
Sbjct: 710 SCMTHGEFEMGIRM 723
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 19/194 (9%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHK-NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
++ G L + + R + T H+ NL ++I ++AK G + +R+LFD +Q++ V WN
Sbjct: 544 VNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 603
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERD----NFSWALMITCYTRKGKLEKARELL------ 152
MI+GY + VE A LFD M E D ++ +++ T G +E+ ++L
Sbjct: 604 VMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY 663
Query: 153 ELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGLA 211
++ P+ +C ++ ++ G +AE MP D V + ++L+ +G+ +
Sbjct: 664 DVKPNLKHYSC---LVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMG 720
Query: 212 LHFFEKMAEKNVVS 225
+ +MAE+ V S
Sbjct: 721 I----RMAERAVAS 730
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 170/575 (29%), Positives = 275/575 (47%), Gaps = 88/575 (15%)
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL 276
+M +V N ++ V GD + + LF PN S+ M+ G
Sbjct: 59 QMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTN---------- 108
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDE-- 334
+WN AA L + +K P K ++ +I KL+E
Sbjct: 109 ----------TWNDHEAA----LSLYRRMKFSGLKPDKFTYNFV-----FIACAKLEEIG 149
Query: 335 -AREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFC 389
R V++ + +D+ +L+ + G+V A K+F++++ RDT+ WNSMI+G+
Sbjct: 150 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 390 QSGRMDEALDLFRQMPKK---------------------------------------NSV 410
++G +A+DLFR+M ++ ++
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
+ +IS Y + G +DSA +F M +++ V+W ++IT + QN +A K M + G
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAE 530
PD T ++G Q+ + + ++++V+ L+ MY KCGRVE A
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 389
Query: 531 QVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
+VF A+ + +WN++I+ YA G+A EA F +M V P +TFIG+LSAC HAG
Sbjct: 390 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAG 446
Query: 591 LANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSL 650
L +QG F M F + P EHY+ ++DLL R G L+EA+ + K + + ++
Sbjct: 447 LVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAI 506
Query: 651 LGACRVHKNLEIGEFAAMRLSEL-EPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
LGAC K++ I E A L E+ E NA NY+ SN+ A+ W+E ++R LMRD+
Sbjct: 507 LGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGV 566
Query: 710 GKLPGCSWIEVQNQIQCFLS---------DDSGRL 735
K PGCSWIE++ ++ FL+ +DSG L
Sbjct: 567 VKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSL 601
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 198/411 (48%), Gaps = 28/411 (6%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+F + +++ +S+I ++AK G++ AR+LFD++++R+ VSWN+MI+GY ++A
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 118 SKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAG 170
LF M E D + M+ + G L R L E+ K L T + +I+
Sbjct: 218 MDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISM 277
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SW 226
Y K G A +VFN M KD V++ +M+ Y+QNGK A F +M + V +
Sbjct: 278 YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTL 337
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG----FARHGKITEARRLFDSMPC 282
+ ++S + G L +Q+ + + + G + + G++ EA R+F++MP
Sbjct: 338 STVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPV 397
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKM--PHKDGVSWTTIINGYIRVGKLDEAREVYN 340
KN +WNAMI AYA EA+ LF +M P D +++ +++ + G + + ++
Sbjct: 398 KNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSD-ITFIGVLSACVHAGLVHQGCRYFH 456
Query: 341 QMP-----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR-- 393
+M I T ++ L + G +DEA + + + + I G C +
Sbjct: 457 EMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDV 516
Query: 394 --MDEALDLFRQMPK-KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
++A+ + +M + KN+ ++ + A D + + M +R +V
Sbjct: 517 AIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVV 567
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 49/326 (15%)
Query: 33 GKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDK 92
G F ++ I GK G ++ A RVF+ I K+ V + +MI+V+++NGK S+A +LF +
Sbjct: 265 GLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 93 MSQRN-----------LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTR 141
M + L + ++ A L + AS+L + + + ++ Y +
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASEL---SLQHNIYVATGLVDMYGK 381
Query: 142 KGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM--PVKDLVSYNSML 199
G++E+A + E +P K + A WNA+I YA +G +A +F+ M P D +++ +L
Sbjct: 382 CGRVEEALRVFEAMPVK-NEATWNAMITAYAHQGHAKEALLLFDRMSVPPSD-ITFIGVL 439
Query: 200 AGYTQNGKMGLALHFFEKMAE-----KNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPN 253
+ G + +F +M+ + + ++ +G L A + E+ P P+
Sbjct: 440 SACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPD 499
Query: 254 AVSWVTML--CGFARHGKITEA--RRLFDSMPCKN----VVSWNAMIAAYAQDLQI-DEA 304
+ +L C + I E R L + KN V+S N + D+++ DE+
Sbjct: 500 EIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVL-----ADMKMWDES 554
Query: 305 VKL--------FIKMPHKDGVSWTTI 322
K+ +K P G SW I
Sbjct: 555 AKMRALMRDRGVVKTP---GCSWIEI 577
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 181/649 (27%), Positives = 310/649 (47%), Gaps = 100/649 (15%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N +++ Y + G + +K F+ + D+ S+ ++L+ + G + A F+KM E++ V
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 225 S-WNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTML--CGFAR-------HGKI 270
+ WN M++G SG ++ +LF ++ + + T+L C + H +
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLV 215
Query: 271 TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF--IKMPHKDGVSWTTIINGYIR 328
+A S +VV NA+I Y + +A +F + +D V++ +I+G
Sbjct: 216 IKAGFFIAS----SVV--NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAG 269
Query: 329 VGKLDEAREVYNQM-----------------PCKDIAAETALMSGLIQTGR--------- 362
K DE+ V+ +M C A + I+TG
Sbjct: 270 F-KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNA 328
Query: 363 ----------VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKN 408
A K+F L +D + WN+MI+ + Q+ A+ ++++M K +
Sbjct: 329 TMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPD 388
Query: 409 SVSW--------------------------------NTMISGYAQAGQMDSAENIFQAME 436
++ N +IS Y++ GQ++ A+ +F+
Sbjct: 389 EFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSL 448
Query: 437 ERNIVSWNSLITGFLQNSLYFDALK--SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVG 494
+N++SWN++I+GF N F+ L+ S +L PD T +G
Sbjct: 449 RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLG 508
Query: 495 NQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALN 554
+Q H Y+L+ G + + NALI MY++CG ++++ +VF + D++SWNSLIS Y+ +
Sbjct: 509 SQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRH 568
Query: 555 GYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G A +K M E +V+PD TF +LSACSHAGL +GL++F MVE + +
Sbjct: 569 GEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVD 628
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMD--VKANAGLWGSLLGACRVHKNLEIGEFAAMRLS 671
H+SCLVDLLGR G L+EA ++V+ + + + +W +L AC H +L++G+ A L
Sbjct: 629 HFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLM 688
Query: 672 ELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEV 720
E E + S Y+ LSN++A AG W+E E R + A K GCSW+ +
Sbjct: 689 EKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 158/350 (45%), Gaps = 64/350 (18%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVF--AKNG 81
H L I + K+ N + A +VF + K+LVT+N+MIS + AK G
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 82 KISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVE--EASKLFDVMPERDNFSWALM 135
K A ++ +M + + ++ +++A L ++E +A + + + S AL
Sbjct: 371 K--SAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNAL- 427
Query: 136 ITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKG-------QFS---------- 178
I+ Y++ G++EKA L E K + WNA+I+G+ G +FS
Sbjct: 428 ISAYSKNGQIEKADLLFERSLRK-NLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL 486
Query: 179 -DAEKVFNLMPV-----------------------KDLVSYNSMLAGYTQNGKMGLALHF 214
DA + L+ + K+ + N+++ Y+Q G + +L
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 215 FEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGK 269
F +M+EK+VVSWN ++S + G+ +A ++ + + P+A ++ +L + G
Sbjct: 547 FNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGL 606
Query: 270 ITEARRLFDSM-----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK 314
+ E +F+SM +NV ++ ++ + +DEA L +K+ K
Sbjct: 607 VEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESL-VKISEK 655
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 253 bits (646), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 242/469 (51%), Gaps = 40/469 (8%)
Query: 326 YIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
Y ++G A VY +M K+ + L++G ++ G + A K+F+++ R WN+MI
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 386 AGFCQSGRMDEALDLFRQM------PKK-------------NSVSWNTMISGYA------ 420
AG Q +E L LFR+M P + SVS I GY
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 421 --------------QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
+ G++ E + ++M RN+V+WN+LI G QN L +M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
G +P++ TF G Q+H +K G + + V ++LI+MY+KCG +
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCL 243
Query: 527 ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP-DQVTFIGMLSA 585
A + F+ E D + W+S+IS Y +G EA + F M + + ++V F+ +L A
Sbjct: 244 GDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 303
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CSH+GL ++GL+LF MVE + +P +HY+C+VDLLGR G L++A ++R M +K +
Sbjct: 304 CSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIV 363
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W +LL AC +HKN E+ + + +++P++++ Y+ L+N+HA A RW +V +R MR
Sbjct: 364 IWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMR 423
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDK 754
DK K G SW E + ++ F D + + + I L ++ M+ K
Sbjct: 424 DKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLK 472
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 182/442 (41%), Gaps = 89/442 (20%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KLG AV V+ KN ++ N +I+ + + G + +AR++FD+M R L +WN MIAG
Sbjct: 6 KLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG 65
Query: 108 YLHNSMVEEASKLFDVM------PER-------------DNFSWALMITCYTRKGKLEKA 148
+ EE LF M P+ + S I YT K LE
Sbjct: 66 LIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE-- 123
Query: 149 RELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
LD +++ Y + G+ D E V MPV++LV++N+++ G QNG
Sbjct: 124 ----------LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCP 173
Query: 209 GLALHFFEKM----AEKNVVSW-----------------------------------NLM 229
L+ ++ M N +++ + +
Sbjct: 174 ETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSL 233
Query: 230 VSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-----N 284
+S + G L A + F + + + V W +M+ + HG+ EA LF++M + N
Sbjct: 234 ISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEIN 293
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-----WTTIINGYIRVGKLDEAREVY 339
V++ ++ A + D+ ++LF M K G +T +++ R G LD+A +
Sbjct: 294 EVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAII 353
Query: 340 NQMPCK-DIAAETALMSGLIQTGRVDEASKMFN---QLSTRDTICWNSMIAGFCQSGRMD 395
MP K DI L+S + A ++F Q+ D+ C+ + + R
Sbjct: 354 RSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWR 413
Query: 396 EALDLFRQMPKKN-----SVSW 412
+ ++ + M KN +SW
Sbjct: 414 DVSEVRKSMRDKNVKKEAGISW 435
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 148/322 (45%), Gaps = 56/322 (17%)
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
Y+K G F A V+ M K+ +S N ++ GY + G + A F++M ++ + +WN M+
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 231 SGFV----NSGDLSSARQLFEKIPNPNAVSWVTMLCG----------------------- 263
+G + N LS R++ +P+ + ++ G
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 264 ------------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
+ R+GK+ + + SMP +N+V+WN +I AQ+ + + L+ M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 312 ------PHKDGVSWTTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLIQTG 361
P+K +++ T+++ + + ++++ + +A ++L+S + G
Sbjct: 184 KISGCRPNK--ITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 241
Query: 362 RVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK-----NSVSWNTMI 416
+ +A+K F++ D + W+SMI+ + G+ DEA++LF M ++ N V++ ++
Sbjct: 242 CLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 301
Query: 417 SGYAQAGQMDSAENIFQAMEER 438
+ +G D +F M E+
Sbjct: 302 YACSHSGLKDKGLELFDMMVEK 323
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 164/382 (42%), Gaps = 50/382 (13%)
Query: 237 GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
GD SA ++ ++ N +S ++ G+ R G + AR++FD MP + + +WNAMIA
Sbjct: 8 GDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLI 67
Query: 297 QDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK----DIA 348
Q +E + LF +M D + ++ +G + + ++++ D+
Sbjct: 68 QFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLV 127
Query: 349 AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP--- 405
++L ++ G++ + + + R+ + WN++I G Q+G + L L++ M
Sbjct: 128 VNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG 187
Query: 406 -KKNSVSWNT-----------------------------------MISGYAQAGQMDSAE 429
+ N +++ T +IS Y++ G + A
Sbjct: 188 CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAA 247
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXX 488
F E+ + V W+S+I+ + + +A++ M + + ++ F
Sbjct: 248 KAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHS 307
Query: 489 XXXQVGNQLHEYIL-KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNS 546
G +L + ++ K G+ L ++ + + G ++ AE + ++ D++ W +
Sbjct: 308 GLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKT 367
Query: 547 LISGYALNGYAIEAFKAFKQML 568
L+S ++ A A + FK++L
Sbjct: 368 LLSACNIHKNAEMAQRVFKEIL 389
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 162/611 (26%), Positives = 291/611 (47%), Gaps = 93/611 (15%)
Query: 202 YTQNGKMGLALHFFEKMAEK--NVVSWNLMVSGFVNSGDLSSARQLFEKI------PNPN 253
Y ++ LA H F+++ N ++W+LM+ + ++ A L+ K+ P
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 254 AVSWVTMLCG---------------------------------FARHGKITEARRLFDSM 280
+V C +A+ G++ A ++FD M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 281 PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS--WTTIINGYI---RVGKLDEA 335
P +++V+WNAMI+ ++ + + + LF+ M DG+S +TI+ + R G L E
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 336 REVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
+ V+ D+ +T ++ ++ + A ++F+ ++ + W++MI G+ ++
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 392 GRMDEALDLFRQMPKKNSVSW--------------------------------------- 412
+ EA ++F QM ++V+
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLT 344
Query: 413 --NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
NT+IS YA+ G + A F + ++++S+NSLITG + N ++ + M G
Sbjct: 345 VQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG 404
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAE 530
+PD +T G+ H Y + GY + + NAL+ MY KCG+++ A+
Sbjct: 405 IRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAK 464
Query: 531 QVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
+VF + D++SWN+++ G+ ++G EA F M V PD+VT + +LSACSH+G
Sbjct: 465 RVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSG 524
Query: 591 LANQGLDLFKCMVE-DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
L ++G LF M DF + P +HY+C+ DLL R G L+EA++ V M + + + G+
Sbjct: 525 LVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGT 584
Query: 650 LLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
LL AC +KN E+G + ++ L S + LSN ++ A RWE+ R+R++ + +
Sbjct: 585 LLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGL 643
Query: 710 GKLPGCSWIEV 720
K PG SW++V
Sbjct: 644 LKTPGYSWVDV 654
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 192/423 (45%), Gaps = 35/423 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
+++ +AK G++ A ++FD+M +R++V+WN MI+G+ + + + LF M D
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGL 201
Query: 131 SWAL-----MITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEK 182
S L M R G L + + + D ++ YAK A +
Sbjct: 202 SPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARR 261
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALH-FFEKMAEKNV-----VSWNLMVSGFVNS 236
VF+L K+ V++++M+ GY +N + A FF+ + NV V+ L++ G
Sbjct: 262 VFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARF 321
Query: 237 GDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
GDLS R + + + T++ +A++G + +A R F + K+V+S+N++I
Sbjct: 322 GDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLI 381
Query: 293 AAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA 348
+ + +E+ +LF +M D + ++ + L + A
Sbjct: 382 TGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYA 441
Query: 349 AET----ALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
T ALM + G++D A ++F+ + RD + WN+M+ GF G EAL LF M
Sbjct: 442 VNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM 501
Query: 405 PK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI-----VSWNSLITGFLQNSL 455
+ + V+ ++S + +G +D + +F +M + + + +T L +
Sbjct: 502 QETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAG 561
Query: 456 YFD 458
Y D
Sbjct: 562 YLD 564
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 164/380 (43%), Gaps = 75/380 (19%)
Query: 46 LGKLGKVEEAVRV--------FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRN 97
LG+ G + E V FSN +LV ++ V+AK+ I AR++FD ++N
Sbjct: 215 LGRAGALREGKAVHGYCTRMGFSN----DLVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSW------ALMITCYTRKGKLEKAREL 151
V+W+ MI GY+ N M++EA ++F M DN + L++ R G L R +
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Query: 152 LELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
LD N +I+ YAK G DA + F+ + +KD++SYNS++ G N +
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRP 390
Query: 209 GLALHFFEKMAEK---------------------------------------NVVSWNLM 229
+ F +M N N +
Sbjct: 391 EESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNAL 450
Query: 230 VSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV---- 285
+ + G L A+++F+ + + VSW TML GF HG EA LF+SM V
Sbjct: 451 MDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDE 510
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKM--------PHKDGVSWTTIINGYIRVGKLDEARE 337
V+ A+++A + +DE +LF M P D + + + R G LDEA +
Sbjct: 511 VTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID--HYNCMTDLLARAGYLDEAYD 568
Query: 338 VYNQMPCK-DIAAETALMSG 356
N+MP + DI L+S
Sbjct: 569 FVNKMPFEPDIRVLGTLLSA 588
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 57/285 (20%)
Query: 39 KNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
+N I K G + +A R FS K++++YNS+I+ N + ++ +LF +M +
Sbjct: 346 QNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGI 405
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
T + G L A + + ++ Y
Sbjct: 406 RPDITTLLGVL------TACSHLAALGHGSSCHGYCVVHGYA------------------ 441
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
++T+ NA++ Y K G+ A++VF+ M +D+VS+N+ML G+ +G AL F M
Sbjct: 442 VNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM 501
Query: 219 AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFD 278
E V NP+ V+ + +L + G + E ++LF+
Sbjct: 502 QETGV---------------------------NPDEVTLLAILSACSHSGLVDEGKQLFN 534
Query: 279 SMP------CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV 317
SM + +N M A+ +DEA KMP + +
Sbjct: 535 SMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDI 579
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNT 103
K GK++ A RVF +++V++N+M+ F +G +A LF+ M + + V+
Sbjct: 456 KCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLA 515
Query: 104 MIAGYLHNSMVEEASKL--------FDVMPERDNFSWALMITCYTRKGKLEKARELLELV 155
+++ H+ +V+E +L F+V+P D+++ M R G L++A + + +
Sbjct: 516 ILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYN--CMTDLLARAGYLDEAYDFVNKM 573
Query: 156 PDKLD--------TACWN 165
P + D +ACW
Sbjct: 574 PFEPDIRVLGTLLSACWT 591
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 243/461 (52%), Gaps = 38/461 (8%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
G ++ AR++FD +P + ++N MI+ Y + + E + L +M + DG + + ++
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 324 N-----GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDT 378
G + R V+ ++ D+ + L++ L+ T
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDT------------------ 184
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+ +SG+++ A +F M +N V +MISGY G ++ AE IF + +
Sbjct: 185 ---------YVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK 235
Query: 439 NIVSWNSLITGFLQNSLYFD-ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
+IV +N+++ GF ++ ++ + M R G P+ STF +VG Q+
Sbjct: 236 DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQV 295
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYA 557
H I+KSG + + ++L+ MYAKCG + A +VF ++ ++ SW S+I GY NG
Sbjct: 296 HAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNP 355
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSC 617
EA + F +M + P+ VTF+G LSACSH+GL ++G ++F+ M D++++P EHY+C
Sbjct: 356 EEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYAC 415
Query: 618 LVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEP-H 676
+VDL+GR G L +AF R M + ++ +W +LL +C +H N+E+ AA L +L
Sbjct: 416 IVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADK 475
Query: 677 NASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSW 717
Y+ LSN++A +W+ V ++R +M+ +R K G SW
Sbjct: 476 RPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 199/439 (45%), Gaps = 73/439 (16%)
Query: 79 KNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD---------------- 122
K G +S ARQ+FD++ + L ++N MI+GYL + +V+E L
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 123 ------------VMP----------------ERDNFSWALMITCYTRKGKLEKARELLEL 154
++P E D+ ++ Y + GKLE AR + E
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 155 VPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNG---KMGLA 211
+ D+ + C ++I+GY +G DAE++FN VKD+V YN+M+ G++++G K +
Sbjct: 201 MKDE-NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVD 259
Query: 212 LHFFEKMA--EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTM----LCGFA 265
++ + A N+ ++ ++ +Q+ +I + + M L +A
Sbjct: 260 MYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYA 319
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTT 321
+ G I +ARR+FD M KNV SW +MI Y ++ +EA++LF +M + V++
Sbjct: 320 KCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLG 379
Query: 322 IINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLI-QTGRVDEASKMFNQLSTR 376
++ G +D+ E++ M K A + L+ + G +++A + + R
Sbjct: 380 ALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
Query: 377 -DTICWNSMIAGFCQSGRMD----EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI 431
D+ W ++++ G ++ A +LF+ K ++ + + YA + D+ I
Sbjct: 440 PDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKI 499
Query: 432 FQAMEERNIV-----SWNS 445
+ M+ R I SW S
Sbjct: 500 REVMKRRRISKTIGRSWTS 518
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
R+ + + V +++ + K+GK+ AR +F+ M N+V +MI+GY++ VE+
Sbjct: 165 RIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVED 224
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL----DTACWNAVIAGYA 172
A ++F+ +D + M+ ++R G+ K + + + + + + +VI +
Sbjct: 225 AEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACS 284
Query: 173 KKGQFSDAEKVFNLMPVKDLVSY----NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL 228
++V + + ++ +S+L Y + G + A F++M EKNV SW
Sbjct: 285 VLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTS 344
Query: 229 MVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
M+ G+ +G+ A +LF ++ PN V+++ L + G + + +F+SM
Sbjct: 345 MIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM---- 400
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
Q D ++K KM H + I++ R G L++A E MP
Sbjct: 401 ---------------QRDYSMK--PKMEH-----YACIVDLMGRAGDLNKAFEFARAMPE 438
Query: 345 K---DIAAETALMSGLIQTGRVDEASKMFNQL 373
+ DI A AL+S G V+ AS ++L
Sbjct: 439 RPDSDIWA--ALLSSCNLHGNVELASIAASEL 468
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 23/254 (9%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K GK+E A VF +N+V SMIS + G + DA ++F+ +++V +N M+ G
Sbjct: 187 KSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEG 246
Query: 108 YLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKLEKARELLELVPDKLDTA 162
+ + + S + +R F ++A +I + E +++ + + +
Sbjct: 247 FSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQI---MKSG 303
Query: 163 CWNAVIAG------YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
+ + G YAK G +DA +VF+ M K++ S+ SM+ GY +NG AL F
Sbjct: 304 VYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFT 363
Query: 217 KMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARH 267
+M E N V++ +S +SG + ++FE + P + ++ R
Sbjct: 364 RMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRA 423
Query: 268 GKITEARRLFDSMP 281
G + +A +MP
Sbjct: 424 GDLNKAFEFARAMP 437
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ + G + A +F + + + ++N +I+G+L++ L + L + M G+K D T
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 479 XXXXXXXXXXXXXQVGNQ-----LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
+ + +H I+K D + AL+ Y K G++ESA VF
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG-LA 592
++ +++ S+ISGY G+ +A +++ + V D V + M+ S +G A
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDA----EEIFNTTKVKDIVVYNAMVEGFSRSGETA 254
Query: 593 NQGLDLFKCM 602
+ +D++ M
Sbjct: 255 KRSVDMYISM 264
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
+ G ++H I+K+G+ DL +S L+ ++ KCG + A QVF + L ++N +ISGY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG---LANQGL------DLFKCM 602
+G E ++M D T +L A + G + + L + KC
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 603 VE--DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
VE D I + LVD + G+LE A V M
Sbjct: 171 VELDDVLI-------TALVDTYVKSGKLESARTVFETM 201
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 175/647 (27%), Positives = 303/647 (46%), Gaps = 98/647 (15%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK--- 221
N VI+ Y SDA KVF+ M +++V++ +M++GYT +GK A+ + +M +
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 222 -------------------------------------NVVSWNLMVSGFVNSGDLSSARQ 244
+VV N +V +V +G L A
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANS 163
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
F++I P++ SW T++ G+ + G + EA LF MP NVVSWN +I+ + D A
Sbjct: 164 SFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFV-DKGSPRA 222
Query: 305 VKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ- 359
++ ++M + DG + + G L ++++ + + + +S LI
Sbjct: 223 LEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDM 282
Query: 360 ---TGRVDEASKMFNQ--LSTRDTIC-WNSMIAGFCQSGRMDEALDLFRQMPKKN----- 408
G + A+ +F+Q L+ ++ WNSM++GF + + AL L Q+ + +
Sbjct: 283 YSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDS 342
Query: 409 --------------------SVSWNTMISGY--------------AQAGQMDSAENIFQA 434
V ++SGY A G + A +F
Sbjct: 343 YTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHR 402
Query: 435 MEERNIVSWNSLITGFLQ---NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
+ ++I++++ LI G ++ NSL F + L+ +G + DQ
Sbjct: 403 LPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDA---DQFIVSNILKVCSSLASL 459
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
G Q+H +K GY ++ + AL+ MY KCG +++ +F + D++SW +I G+
Sbjct: 460 GWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGF 519
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
NG EAF+ F +M++ + P++VTF+G+LSAC H+GL + + M ++ +EP
Sbjct: 520 GQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPY 579
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLS 671
EHY C+VDLLG+ G +EA ++ M ++ + +W SLL AC HKN + A +L
Sbjct: 580 LEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLL 639
Query: 672 ELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
+ P + S Y +LSN +A G W+++ ++R + K K G SWI
Sbjct: 640 KGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAK-KLGAKESGMSWI 685
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 192/380 (50%), Gaps = 19/380 (5%)
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
+NV N +I+ Y + +A K+F +M ++ V+WTT+++GY GK ++A E+Y +M
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
Query: 343 -PCKDIAAETALMSGLIQ----TGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGR 393
++ AA + S +++ G + ++ ++ D + NS++ + ++GR
Sbjct: 98 LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 394 MDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN 453
+ EA F+++ + +S SWNT+ISGY +AG MD A +F M + N+VSWN LI+GF+
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
AL+ LV M REG D +G QLH ++KSG + F
Sbjct: 218 G-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAI 276
Query: 514 NALIAMYAKCGRVESAEQVFTAIECV---DLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+ALI MY+ CG + A VF + + WNS++SG+ +N A Q+
Sbjct: 277 SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQS 336
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDLFK-CMVEDFAIEPLAEHYSCLVDLLGRMGRLE 629
++ D T G L C + GL + +V + ++ + S LVDL +G ++
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVG--SILVDLHANVGNIQ 394
Query: 630 EA---FNVVRGMDVKANAGL 646
+A F+ + D+ A +GL
Sbjct: 395 DAHKLFHRLPNKDIIAFSGL 414
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 231/534 (43%), Gaps = 100/534 (18%)
Query: 45 HLGKLG--KVEEAVR--VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS 100
H GK+ K E+++ V I +N+ N++IS++ +SDA ++FD+MS+RN+V+
Sbjct: 14 HCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVT 73
Query: 101 WNTMIAGYLH----NSMVEEASKLFDVMPERDN-FSWALMITCYTRKGKLEKARELLELV 155
W TM++GY N +E ++ D E N F ++ ++ G ++ + E +
Sbjct: 74 WTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI 133
Query: 156 PD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ D N+V+ Y K G+ +A F + S+N++++GY + G M A+
Sbjct: 134 GKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 213 HFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGF---ARHGK 269
F +M + NVVSWN ++SGFV+ G + L + + CG + G
Sbjct: 194 TLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGL 253
Query: 270 ITEARRL--------FDSMP------------C------------------KNVVSWNAM 291
+T ++L +S P C +V WN+M
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 292 IAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVG----KLDEAREVYNQMPCKDI 347
++ + + + + A+ L +++ D + ++G +++ L +V++ +
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 348 AAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
+ + S L+ G + +A K+F++L +D I ++ +I G +SG A LFR+
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 404 MPKKN-------------------SVSWNTMISG--------------------YAQAGQ 424
+ K S+ W I G Y + G+
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+D+ +F M ER++VSW +I GF QN +A + M G +P++ TF
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTF 547
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNT 103
K G+++ V +F + +++V++ +I F +NG++ +A + F KM + N V++
Sbjct: 490 KCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLG 549
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELVPDK 158
+++ H+ ++EEA + M + ++ + G ++A EL+ +P +
Sbjct: 550 LLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLE 609
Query: 159 LDTACWNAVIA--GYAKKGQFSD--AEKVFNLMPVKDLVSYNSMLAGYTQNG 206
D W +++ G K AEK+ P D Y S+ Y G
Sbjct: 610 PDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFP-DDPSVYTSLSNAYATLG 660
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/651 (26%), Positives = 301/651 (46%), Gaps = 91/651 (13%)
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI------ 249
NS L G + A F+KM ++VSW ++ +V + + A LF +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 250 --PNPNAVSWVTMLCGFAR---HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
P+ + +S V CG + +G+ A + S+ +V ++++ Y + +ID++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSL-LSSVYVGSSLLDMYKRVGKIDKS 162
Query: 305 VKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET------------- 351
++F +MP ++ V+WT II G + G+ E +++M + ++T
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 352 ------------ALMSGLIQT--------------GRVDEASKMFNQLSTRDTICWNSMI 385
++ G + T G + + +F +S RD + W S+I
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 386 AGFCQSGRMDEALDLFRQM------PKKNSVS-------------W-------------- 412
+ + G+ +A++ F +M P + + + W
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 413 ------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
N+M+ Y+ G + SA +FQ M R+I+SW+++I G+ Q + K M
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
+ G KP + G Q+H L G + V ++LI MY+KCG +
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 527 ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
+ A +F + D++S ++I+GYA +G + EA F++ L PD VTFI +L+AC
Sbjct: 463 KEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTAC 522
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
+H+G + G F M E + + P EHY C+VDLL R GRL +A ++ M K + +
Sbjct: 523 THSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV 582
Query: 647 WGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
W +LL AC+ ++E G AA R+ EL+P A+ +TL+N+++ G EE +R M+
Sbjct: 583 WTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKA 642
Query: 707 KRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILN-AISAHMRDKFN 756
K K PG S I++++ + F+S D + E I IL A+S +F+
Sbjct: 643 KGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVSGAEAHRFD 693
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/521 (22%), Positives = 202/521 (38%), Gaps = 141/521 (27%)
Query: 52 VEEAVRVFSNTIHKNLVTY--NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
VEE + SN + +V + NS + G + ARQ+FDKM ++VSW ++I Y+
Sbjct: 26 VEENIVRISNQV---MVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYV 82
Query: 110 HNSMVEEASKLFDVM--------PERDNFSWAL--------------------------- 134
+ +EA LF M P+ S L
Sbjct: 83 TANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSS 142
Query: 135 ------MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMP 188
++ Y R GK++K+ + +P + + W A+I G G++ + F+ M
Sbjct: 143 VYVGSSLLDMYKRVGKIDKSCRVFSEMPFR-NAVTWTAIITGLVHAGRYKEGLTYFSEMS 201
Query: 189 ---------------------------------------VKDLVSYNSMLAGYTQNGKMG 209
V L NS+ YT+ G+M
Sbjct: 202 RSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQ 261
Query: 210 LALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCG-- 263
L FE M+E++VVSW ++ + G A + F K+ N PN ++ +M
Sbjct: 262 DGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Query: 264 ---------------------------------FARHGKITEARRLFDSMPCKNVVSWNA 290
++ G + A LF M C++++SW+
Sbjct: 322 SLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWST 381
Query: 291 MIAAYAQDLQIDEAVKLFIKM------PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
+I Y Q +E K F M P ++ ++G + V ++ R+V+ C
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAV--IEGGRQVHALALC 439
Query: 345 KDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
+ + + S LI + G + EAS +F + D + +MI G+ + G+ EA+DL
Sbjct: 440 FGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDL 499
Query: 401 FRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
F + K +SV++ ++++ +GQ+D + F M+E
Sbjct: 500 FEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQE 540
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 141/313 (45%), Gaps = 20/313 (6%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V S ++ +L NSM+ +++ G + A LF M R+++SW+T+I GY EE
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395
Query: 118 SKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELV---PDKLDTACWNAVIAG 170
K F M + +F+ A +++ +E R++ L + ++ +++I
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSW 226
Y+K G +A +F D+VS +M+ GY ++GK A+ FEK + + V++
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+++ +SG L F + P + M+ R G++++A ++ + M
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMS 575
Query: 282 -CKNVVSWNAMIAAYAQDLQID---EAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEARE 337
K+ V W ++ A I+ A + +++ + T+ N Y G L+EA
Sbjct: 576 WKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAAN 635
Query: 338 VYNQMPCKDIAAE 350
V M K + E
Sbjct: 636 VRKNMKAKGVIKE 648
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNT 103
K G ++EA +F T ++V+ +MI+ +A++GK +A LF+K + V++ +
Sbjct: 458 KCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFIS 517
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELVPDK 158
++ H+ ++ F++M E N + M+ R G+L A +++ + K
Sbjct: 518 VLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWK 577
Query: 159 LDTACWNAVIAGYAKKGQFSD----AEKVFNLMPV--KDLVSYNSMLAGYTQNGKMGLAL 212
D W ++ KG AE++ L P LV+ ++ Y+ G + A
Sbjct: 578 KDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANI---YSSTGNLEEAA 634
Query: 213 HFFEKMAEKNVV---SWNLM-----VSGFVNSGD 238
+ + M K V+ W+ + VS FV SGD
Sbjct: 635 NVRKNMKAKGVIKEPGWSSIKIKDCVSAFV-SGD 667
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/502 (30%), Positives = 252/502 (50%), Gaps = 48/502 (9%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSW 319
+A + + AR+LFD P ++V WN++I AYA+ Q + LF ++ D ++
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY 109
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLST 375
+ G+ R ++ + + +A++ + G + EASK+F +
Sbjct: 110 ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPD 169
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQM---------------------PKKNSVSWNT 414
D WN MI G+ G D+ ++LF M P V+W+
Sbjct: 170 PDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSV 229
Query: 415 ------------------MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
+++ Y++ + SA ++F ++ E ++V+ +SLITG+ + +
Sbjct: 230 HAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNH 289
Query: 457 FDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
+AL + GKKPD G ++H Y+++ G D+ V +AL
Sbjct: 290 KEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSAL 349
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
I MY+KCG ++ A +F I +++S+NSLI G L+G+A AF+ F ++L ++PD+
Sbjct: 350 IDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDE 409
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVR 636
+TF +L C H+GL N+G ++F+ M +F IEP EHY +V L+G G+LEEAF V
Sbjct: 410 ITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVM 469
Query: 637 GMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNY-ITLSNMHAEAGRWE 695
+ ++G+ G+LL C VH+N + E A + + S Y + LSN++A GRW+
Sbjct: 470 SLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWD 529
Query: 696 EVERLRVLMRDKRAGKLPGCSW 717
EVERLR + + GKLPG SW
Sbjct: 530 EVERLRDGISESYGGKLPGISW 551
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 176/426 (41%), Gaps = 67/426 (15%)
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNF 130
+A N + AR+LFD +R++ WN++I Y LF D P DNF
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRP--DNF 107
Query: 131 SWALMITCYTRKGKLEKAREL--LELVPD-KLDTACWNAVIAGYAKKGQFSDAEKVFNLM 187
++A + ++ + R + + +V D C +A++ Y+K G +A K+F +
Sbjct: 108 TYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSI 167
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN---------------------VVSW 226
P DL +N M+ GY G ++ F M + +V+W
Sbjct: 168 PDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAW 227
Query: 227 NL------------------MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHG 268
++ +V+ + ++SA +F I P+ V+ +++ G++R G
Sbjct: 228 SVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCG 287
Query: 269 KITEARRLFDSM-------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-DGVSWT 320
EA LF + C V A + + E I++ + D +
Sbjct: 288 NHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCS 347
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL----STR 376
+I+ Y + G L A ++ +P K+I + +L+ GL G A + F ++
Sbjct: 348 ALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIP 407
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT-----MISGYAQAGQMDSAENI 431
D I +++++ C SG +++ ++F +M + + T M+ AG+++ A
Sbjct: 408 DEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEF 467
Query: 432 FQAMEE 437
++++
Sbjct: 468 VMSLQK 473
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 134/301 (44%), Gaps = 39/301 (12%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
++++ ++K G I +A +LF + +L WN MI GY ++ LF++M R +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH- 203
Query: 131 SWALMITCYT----RKGKLEKARELLE------LVPDKLDTACW--NAVIAGYAKKGQFS 178
CYT G ++ + L+ + LD+ + A++ Y++ +
Sbjct: 204 ----QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD 238
A VFN + DLV+ +S++ GY++ G ALH F ++ ++V+
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIV----- 314
Query: 239 LSSARQLFEKIPNPNAVSWVTML--------CG-----FARHGKITEARRLFDSMPCKNV 285
L S +L + + S+V L C +++ G + A LF +P KN+
Sbjct: 315 LGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNI 374
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQ 341
VS+N++I A + F ++ D ++++ ++ G L++ +E++ +
Sbjct: 375 VSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFER 434
Query: 342 M 342
M
Sbjct: 435 M 435
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/587 (28%), Positives = 280/587 (47%), Gaps = 52/587 (8%)
Query: 228 LMVSGFVNSGDLSSARQLFEKI-PNPNAVSWVTMLCGFA--------------RHGKITE 272
+ S +L A+ LF PNPN + TM+ + RH +++
Sbjct: 73 IFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRH-RVSP 131
Query: 273 ARRLF-------------DSMPCKNVVS---------WNAMIAAYAQDLQIDEAVKLFIK 310
R+ F + C +VS WN+++ Y + A K+F +
Sbjct: 132 DRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFAR 191
Query: 311 MPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAA-ETALMSGLIQTGRVDEAS-- 367
MPH D S+ +I GY + G EA ++Y +M I E ++S L+ G + +
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
Query: 368 -------KMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYA 420
+ + + + I N+++ + + A F M KK+ SWNTM+ G+
Sbjct: 252 KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311
Query: 421 QAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV--LMGREGKKPDQSTF 478
+ G M++A+ +F M +R++VSWNSL+ G+ + ++ L + E KPD+ T
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
G +H +++ D F+S+ALI MY KCG +E A VF
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
D+ W S+I+G A +G +A + F +M E V P+ VT + +L+ACSH+GL +GL +
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV-RGMDVKANAGLWGSLLGACRVH 657
F M + F +P EHY LVDLL R GR+EEA ++V + M ++ + +WGS+L ACR
Sbjct: 492 FNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGG 551
Query: 658 KNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSW 717
+++E E A L +LEP Y+ LSN++A GRW ++ R M ++ K G S
Sbjct: 552 EDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSS 611
Query: 718 IEVQNQIQCFL-SDDSGRLRPETIQIILNAISAHMRDKFNVFNMQSV 763
+ + F+ ++ R I+ IL + M+ K + ++ +
Sbjct: 612 VVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPKLDCLDLLEI 658
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 196/402 (48%), Gaps = 54/402 (13%)
Query: 70 YNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP---- 125
+NS++ + + G A ++F +M ++ S+N MI GY EA KL+ M
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 126 ERDNFS-WALMITC---------------YTRKGKLEKARELLELVPDKLDTACWNAVIA 169
E D ++ +L++ C R+G + + +L NA++
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS-----------NALLD 277
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM 229
Y K + A++ F+ M KD+ S+N+M+ G+ + G M A F++M ++++VSWN +
Sbjct: 278 MYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSL 337
Query: 230 VSGFVNSG-DLSSARQLF------EKIPNPNAVSWVTMLCGFARHGKITEAR---RLFDS 279
+ G+ G D + R+LF EK+ P+ V+ V+++ G A +G+++ R L
Sbjct: 338 LFGYSKKGCDQRTVRELFYEMTIVEKV-KPDRVTMVSLISGAANNGELSHGRWVHGLVIR 396
Query: 280 MPCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREV 338
+ K + +A+I Y + I+ A +F KD WT++I G G +A ++
Sbjct: 397 LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQL 456
Query: 339 YNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTR-----DTICWNSMIAGFC 389
+ +M + + A+++ +G V+E +FN + + +T + S++ C
Sbjct: 457 FGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLC 516
Query: 390 QSGRMDEALDLF-RQMPKKNSVS-WNTMISGYAQAGQMDSAE 429
++GR++EA D+ ++MP + S S W +++S +++AE
Sbjct: 517 RAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAE 558
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 178/406 (43%), Gaps = 70/406 (17%)
Query: 97 NLVSWNTMIAGY---------LHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEK 147
N+ +NTMI+ L++SM+ V P+R F + + + + + K
Sbjct: 99 NVFVYNTMISAVSSSKNECFGLYSSMIRHR-----VSPDRQTFLYLMKASSFLSEVKQIH 153
Query: 148 ARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
++ L WN+++ Y + G F AEKVF MP D+ S+N M+ GY + G
Sbjct: 154 CHIIVSGCLS-LGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGF 212
Query: 208 MGLALHFFEKMAE--------------------------KNVVSW----------NLMVS 231
AL + KM K V W NL++S
Sbjct: 213 SLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS 272
Query: 232 G-----FVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
+ + A++ F+ + + SW TM+ GF R G + A+ +FD MP +++V
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 287 SWNAMIAAYAQDLQIDEAVK-LFIKMP-----HKDGVSWTTIINGYIRVGKLDEAREVYN 340
SWN+++ Y++ V+ LF +M D V+ ++I+G G+L R V+
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 341 QMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDE 396
+ + + L S LI + G ++ A +F + +D W SMI G G +
Sbjct: 393 LVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQ 452
Query: 397 ALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
AL LF +M ++ N+V+ +++ + +G ++ ++F M+++
Sbjct: 453 ALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK 498
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 152/307 (49%), Gaps = 32/307 (10%)
Query: 44 IHLGK--LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
I LGK G +E V+S+ NL+ N+++ ++ K + A++ FD M ++++ SW
Sbjct: 248 IRLGKGVHGWIERRGPVYSS----NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSW 303
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKA-RELL-------E 153
NTM+ G++ +E A +FD MP+RD SW ++ Y++KG ++ REL +
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363
Query: 154 LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNL---MPVK-DLVSYNSMLAGYTQNGKMG 209
+ PD++ ++I+G A G+ S V L + +K D ++++ Y + G +
Sbjct: 364 VKPDRVTMV---SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIE 420
Query: 210 LALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFA 265
A F+ EK+V W M++G G+ A QLF ++ PN V+ + +L +
Sbjct: 421 RAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS 480
Query: 266 RHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKLF-IKMPHKDGVS- 318
G + E +F+ M K + +++ + +++EA + KMP + S
Sbjct: 481 HSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSM 540
Query: 319 WTTIING 325
W +I++
Sbjct: 541 WGSILSA 547
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 150/338 (44%), Gaps = 51/338 (15%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNG-KISDARQLFDKMS---- 94
N ++ +LG +E A VF ++LV++NS++ ++K G R+LF +M+
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363
Query: 95 -QRNLVSWNTMIAGYLHNSMVEEA----SKLFDVMPERDNFSWALMITCYTRKGKLEKAR 149
+ + V+ ++I+G +N + + + + D F + +I Y + G +E+A
Sbjct: 364 VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF 423
Query: 150 ELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYN-SMLAGYTQNGKM 208
+ + +K D A W ++I G A G A ++F M + + N ++LA T
Sbjct: 424 MVFKTATEK-DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHS 482
Query: 209 GL---ALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFA 265
GL LH F M +K GF +P + +++
Sbjct: 483 GLVEEGLHVFNHMKDK---------FGF-----------------DPETEHYGSLVDLLC 516
Query: 266 RHGKITEARRLFD-SMPCKNVVS-WNAMIAAY--AQDLQIDE-AVKLFIKM-PHKDGVSW 319
R G++ EA+ + MP + S W ++++A +D++ E A+ +K+ P K+G +
Sbjct: 517 RAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEG-GY 575
Query: 320 TTIINGYIRVGKL---DEAREVYNQMPCKDIAAETALM 354
+ N Y VG+ D+ RE K A ++++
Sbjct: 576 VLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVV 613
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 248/468 (52%), Gaps = 15/468 (3%)
Query: 301 IDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT 360
I A K+F ++P D +S T +I +++ + EA + + ++ C I +I +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 361 GRVDEASKMFNQLS--------TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSW 412
K+ QL + ++++ + + + +A F N VS
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
+ISGY + + + A ++F+AM ER++V+WN++I GF Q +A+ + V M REG
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 473 -PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS-GYINDLFVSNALIAMYAKCGRVESAE 530
P++STF G +H +K G ++FV N+LI+ Y+KCG +E +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 531 QVFTAIE--CVDLISWNSLISGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACS 587
F +E +++SWNS+I GYA NG EA F++M+ + + P+ VT +G+L AC+
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 588 HAGLANQGLDLFKCMVEDFAIEPLAE--HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
HAGL +G F V D+ L E HY+C+VD+L R GR +EA +++ M + G
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
W +LLG C++H N + + AA ++ EL+P + S+Y+ LSN ++ W+ V +R M+
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
+ + GCSWIEV++QI+ F++ D + + +L +S H+ +
Sbjct: 463 ETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEE 510
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 153/321 (47%), Gaps = 39/321 (12%)
Query: 145 LEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
+ A ++ + +P+ LD AVI + K+ + +A + F + + ++ +++
Sbjct: 43 IRNAHKVFDEIPE-LDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 201 GYT--QNGKMGLALHFFE-KMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS 256
T ++ K+G LH + KM NV + +++ +V L+ AR+ F+ +PN VS
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDG 316
++ G+ + + EA LF +MP ++VV+WNA+I ++Q + +EAV F+ M
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM----- 216
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL---IQTGRVDEASKMFNQL 373
+R G + + PC A G I + K FN
Sbjct: 217 ----------LREGVVIPNESTF---PCAITAISNIASHGAGKSIHACAIKFLGKRFN-- 261
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQM--PKKNSVSWNTMISGYAQAGQMDSAENI 431
WNS+I+ + + G M+++L F ++ ++N VSWN+MI GYA G+ + A +
Sbjct: 262 ----VFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAM 317
Query: 432 FQAM-EERNIVSWNSLITGFL 451
F+ M ++ N+ N I G L
Sbjct: 318 FEKMVKDTNLRPNNVTILGVL 338
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 141/308 (45%), Gaps = 31/308 (10%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KL + +A R F +T N+V+ ++IS + K + +A LF M +R++V+WN +I G
Sbjct: 140 KLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGG 199
Query: 108 YLHNSMVEEASKLF-------DVMPERDNFSWALMITCYTRKGKLEKAREL----LELVP 156
+ EEA F V+P F A IT + + + ++ +
Sbjct: 200 FSQTGRNEEAVNTFVDMLREGVVIPNESTFPCA--ITAISNIASHGAGKSIHACAIKFLG 257
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKVFNLM--PVKDLVSYNSMLAGYTQNGKMGLALHF 214
+ + WN++I+ Y+K G D+ FN + +++VS+NSM+ GY NG+ A+
Sbjct: 258 KRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAM 317
Query: 215 FEKMA-EKNVVSWNLMVSGFV----NSGDLSSARQLFEKIPN----PNAVS---WVTMLC 262
FEKM + N+ N+ + G + ++G + F K N PN + + M+
Sbjct: 318 FEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVD 377
Query: 263 GFARHGKITEARRLFDSMPCKNVVS-WNAMIAA---YAQDLQIDEAVKLFIKMPHKDGVS 318
+R G+ EA L SMP + W A++ ++ A +++ +D S
Sbjct: 378 MLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSS 437
Query: 319 WTTIINGY 326
+ + N Y
Sbjct: 438 YVMLSNAY 445
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 173/376 (46%), Gaps = 48/376 (12%)
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD------VMPERDNFSWALMI 136
I +A ++FD++ + +++S +I ++ S EAS+ F + P F +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 137 TCYTRKGKLEKARELLELVPDKLDTA----CWNAVIAGYAKKGQFSDAEKVFNLMPVKDL 192
+ +R KL K L K+ A +AV+ Y K +DA + F+ ++
Sbjct: 103 STTSRDVKLGKQLHCYAL---KMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF-----E 247
VS ++++GY + + AL F M E++VV+WN ++ GF +G A F E
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLRE 219
Query: 248 KIPNPNAVSW---VTMLCGFARHGKITEARRLFDSMPCK------NVVSWNAMIAAYAQD 298
+ PN ++ +T + A HG A + + K NV WN++I+ Y++
Sbjct: 220 GVVIPNESTFPCAITAISNIASHG----AGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 275
Query: 299 LQIDEAVKLFIKM--PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TA 352
+++++ F K+ ++ VSW ++I GY G+ +EA ++ +M KD T
Sbjct: 276 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM-VKDTNLRPNNVTI 334
Query: 353 L-------MSGLIQTGRV--DEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
L +GLIQ G + ++A ++ + + + M+ +SGR EA +L +
Sbjct: 335 LGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKS 394
Query: 404 MPKKNSVS-WNTMISG 418
MP + W ++ G
Sbjct: 395 MPLDPGIGFWKALLGG 410
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 34/289 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
N+ +++++ + K ++DAR+ FD N+VS +I+GYL EEA LF MP
Sbjct: 127 NVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP 186
Query: 126 ERDNFSWALMITCYTRKGKLEKA--------RELLELVPDKLDTACWNAVIAGYAKKGQF 177
ER +W +I +++ G+ E+A RE + ++P++ C I+ A G
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV-VIPNESTFPCAITAISNIASHG-- 243
Query: 178 SDAEKVFNLMPVK------DLVSYNSMLAGYTQNGKMGLALHFFEKMAE--KNVVSWNLM 229
A K + +K ++ +NS+++ Y++ G M +L F K+ E +N+VSWN M
Sbjct: 244 --AGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSM 301
Query: 230 VSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLF------- 277
+ G+ ++G A +FEK+ PN V+ + +L G I E F
Sbjct: 302 IWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDY 361
Query: 278 DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-WTTIING 325
D + + M+ ++ + EA +L MP G+ W ++ G
Sbjct: 362 DDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGG 410
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 260/528 (49%), Gaps = 52/528 (9%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM-----PHKDGVS 318
+ + + AR+LFD MP +NVVSW AM+ Y E +KLF M +
Sbjct: 79 YVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFV 138
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV----DEASKMFNQLS 374
T + G+++E ++ + + + + + L+ + EA ++ + L
Sbjct: 139 ATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP 198
Query: 375 TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWN--------------------- 413
D ++S ++G+ + G E LD+ R+ ++ V WN
Sbjct: 199 YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRLFSNLRDLNLAL 257
Query: 414 -------------------TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
+I+ Y + G++ A+ +F +NI +++ + Q+
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
+ +AL M + P++ TF + G+ LH +LKSGY N + V N
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
AL+ MYAK G +E A + F+ + D+++WN++ISG + +G EA +AF +M+ +P
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIP 437
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
+++TFIG+L ACSH G QGL F +++ F ++P +HY+C+V LL + G ++A +
Sbjct: 438 NRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDF 497
Query: 635 VRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
+R ++ + W +LL AC V +N +G+ A E P+++ Y+ LSN+HA++ W
Sbjct: 498 MRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREW 557
Query: 695 EEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
E V ++R LM ++ K PG SWI ++NQ FL++D+ PE I
Sbjct: 558 EGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQ--HPEITLI 603
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 34/381 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PE 126
NS+I+++ K + AR+LFD M +RN+VSW M+ GY ++ E KLF M
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 127 RDN-FSWALMITCYTRKGKLEKAREL------LELVPDKLDTACWNAVIAGYAKKGQFSD 179
R N F ++ + G++E+ ++ L+ + N ++ Y+ +
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEF---VRNTLVYMYSLCSGNGE 189
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM-----VSGFV 234
A +V + +P DL ++S L+GY + G L K A ++ V WN + + F
Sbjct: 190 AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRLFS 248
Query: 235 NSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA 290
N DL+ A Q+ ++ N + ++ + + GK+ A+R+FD +N+
Sbjct: 249 NLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTT 308
Query: 291 MIAAYAQDLQIDEAVKLFIKMPHKD----GVSWTTIINGYIRVGKLDEAREVYNQMPCKD 346
++ AY QD +EA+ LF KM K+ ++ ++N + L + ++ + + K
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLVLKS 367
Query: 347 -----IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ AL++ ++G +++A K F+ ++ RD + WN+MI+G G EAL+ F
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAF 427
Query: 402 RQMPKKNSVSWNTMISGYAQA 422
+M + G QA
Sbjct: 428 DRMIFTGEIPNRITFIGVLQA 448
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------ 124
N++++++AK+G I DAR+ F M+ R++V+WNTMI+G H+ + EA + FD M
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 125 PERDNFSWALMITC---YTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAE 181
P R F L + +G L +L++ + D + ++ +K G F DAE
Sbjct: 437 PNRITFIGVLQACSHIGFVEQG-LHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE 495
Query: 182 KVFNLMPVK-DLVSYNSML-AGYT-QNGKMG 209
P++ D+V++ ++L A Y +N ++G
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNACYVRRNYRLG 526
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 492 QVGNQLHEYIL---KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
++G +H +++ +S D + N+LI +Y KC A ++F + +++SW +++
Sbjct: 48 RIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMM 107
Query: 549 SGYALNGYAIEAFKAFKQM-LSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
GY +G+ E K FK M S E P++ + +CS++G +G C ++
Sbjct: 108 KGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLK 164
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 278/548 (50%), Gaps = 50/548 (9%)
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK 314
V W ++L +A+ GK+ +A +LFD MP ++V+S N + + ++ + + L +M
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 315 DGVSWTTI--------------------------------------INGYIRVGKLDEAR 336
G T+ I Y + G R
Sbjct: 151 GGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 337 EVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN----QLSTRDTICWNSMIAGFCQSG 392
V++ M +++ TA++SGLI+ ++ ++F+ L +++ + S +A S
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 393 RMDEALDLFRQMPKKNSVSW----NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
R+ E + + K S + ++ Y++ G ++ A IF++ E + VS ++
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN 508
G QN +A++ + M + G + D + +G QLH ++K +
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
+ FV+N LI MY+KCG + ++ VF + + +SWNS+I+ +A +G+ + A K +++M
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 569 SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
+ EV P VTF+ +L ACSH GL ++G +L M E IEP EHY+C++D+LGR G L
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 629 EEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMH 688
+EA + + + +K + +W +LLGAC H + E+GE+AA +L + P ++S +I ++N++
Sbjct: 511 KEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIY 570
Query: 689 AEAGRWEEVERLRVLMRDKRAG--KLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNA 746
+ G+W+ ER + + R K G K G S IE++++ F+ +D + E I +L+
Sbjct: 571 SSRGKWK--ERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSG 628
Query: 747 ISAHMRDK 754
+ M D+
Sbjct: 629 LFPVMVDE 636
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 188/398 (47%), Gaps = 58/398 (14%)
Query: 63 IHKN-LVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF 121
IH+N LV +NS++S++AK GK+ DA +LFD+M R+++S N + G+L N E L
Sbjct: 85 IHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLL 144
Query: 122 DVMPERDNFSWA----LMITCYTRK----GKLEKARELLELVPDKLDTACWNAVIAGYAK 173
M F A ++ C T + K+ A +L ++ N +I Y K
Sbjct: 145 KRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVG--NKLITSYFK 202
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGF 233
G VF+ M +++++ ++++G +N ++ E + ++LM G
Sbjct: 203 CGCSVSGRGVFDGMSHRNVITLTAVISGLIEN-----------ELHEDGLRLFSLMRRGL 251
Query: 234 VNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRL--------FDSMPCKNV 285
V +PN+V++++ L + +I E +++ +S C
Sbjct: 252 V----------------HPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE- 294
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK 345
+A++ Y++ I++A +F D VS T I+ G + G +EA + + +M
Sbjct: 295 ---SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQA 351
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTR--------DTICWNSMIAGFCQSGRMDEA 397
+ + ++S ++ +D + + QL + +T N +I + + G + ++
Sbjct: 352 GVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDS 411
Query: 398 LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+FR+MPK+N VSWN+MI+ +A+ G +A +++ M
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 151/375 (40%), Gaps = 72/375 (19%)
Query: 19 MTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFA 78
+T M H L I S K + N+ I K G VF H+N++T ++IS
Sbjct: 173 VTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLI 232
Query: 79 KNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITC 138
+N D +LF M +R LV N++ YL S+ + W
Sbjct: 233 ENELHEDGLRLFSLM-RRGLVHPNSVT--YLSALAACSGSQRIVEGQQIHALLWK----- 284
Query: 139 YTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
Y + +L L+++ Y+K G DA +F D VS +
Sbjct: 285 YGIESELCIESALMDM----------------YSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 199 LAGYTQNGKMGLALHFFEKM------AEKNVVSWNLMVS--------------------- 231
L G QNG A+ FF +M + NVVS L VS
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF 388
Query: 232 ---GFVNS---------GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
FVN+ GDL+ ++ +F ++P N VSW +M+ FARHG A +L++
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 280 MPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-----WTTIINGYIRVG 330
M V V++ +++ A + ID+ +L +M G+ +T II+ R G
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 331 KLDEAREVYNQMPCK 345
L EA+ + +P K
Sbjct: 509 LLKEAKSFIDSLPLK 523
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H L I + F N I K G + ++ VF +N V++NSMI+ FA++G
Sbjct: 380 HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHG 439
Query: 84 SDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WAL 134
A +L+++M+ + V++ +++ H ++++ +L + M E +
Sbjct: 440 LAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTC 499
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIA-----GYAKKGQFSDAEKVFNLMPV 189
+I R G L++A+ ++ +P K D W A++ G + G+++ AE++F P
Sbjct: 500 IIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYA-AEQLFQTAP- 557
Query: 190 KDLVSYNSMLAG-YTQNGK 207
D S + ++A Y+ GK
Sbjct: 558 -DSSSAHILIANIYSSRGK 575
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 280/561 (49%), Gaps = 41/561 (7%)
Query: 224 VSWNLMVSGFVNSG----DLSSARQLFEKIPNPNAVSWVTML--CG------FAR--HGK 269
+ WN++++ + + +++ +++ K P+A ++ ++L CG F R HG
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRV 329
I + C NA+I+ Y + + A +LF +M +D VSW +IN Y
Sbjct: 170 IEVSSYKSSLYVC------NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASE 223
Query: 330 GKLDEAREVYNQMPCKDIAAETA----LMSGLIQTGRVDEA----SKMFNQLSTRDTICW 381
G EA E++++M + + G +QTG A S+M N ++ D +
Sbjct: 224 GMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPV-- 281
Query: 382 NSMIAGF--------CQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQ 433
+MI G + G+ L + ++V NT+I+ Y++ + A +F+
Sbjct: 282 -AMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVR-NTLITMYSKCKDLRHALIVFR 339
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
EE ++ +WNS+I+G+ Q + +A L M G +P+ T Q
Sbjct: 340 QTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQH 399
Query: 494 GNQLHEYILKSGYINDL-FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
G + H YIL+ D + N+L+ +YAK G++ +A+QV + D +++ SLI GY
Sbjct: 400 GKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYG 459
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
G A FK+M + PD VT + +LSACSH+ L ++G LF M ++ I P
Sbjct: 460 NQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCL 519
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSE 672
+H+SC+VDL GR G L +A +++ M K + W +LL AC +H N +IG++AA +L E
Sbjct: 520 QHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE 579
Query: 673 LEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDS 732
++P N Y+ ++NM+A AG W ++ +R +MRD K PGC+WI+ + F D+
Sbjct: 580 MKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDT 639
Query: 733 GRLRPETIQIILNAISAHMRD 753
+L+ ++ M+D
Sbjct: 640 SSPEACNTYPLLDGLNQLMKD 660
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 198/449 (44%), Gaps = 43/449 (9%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
L V+ S+ + + V +++ ++ ++A+ + + + + WN +IA Y
Sbjct: 60 LAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASY 119
Query: 109 LHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKAREL---LELVPDKLDT 161
N + EE + M + D F++ ++ + R + +E+ K
Sbjct: 120 AKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSL 179
Query: 162 ACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM--- 218
NA+I+ Y + A ++F+ M +D VS+N+++ Y G A F+KM
Sbjct: 180 YVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFS 239
Query: 219 -AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-PNAVSWVTMLCGFA--------RHG 268
E +V++WN++ G + +G+ A L ++ N P ++ V M+ G R G
Sbjct: 240 GVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLG 299
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIR 328
K + S + V N +I Y++ + A+ +F + +W +II+GY +
Sbjct: 300 KEIHGLAIHSSYDGIDNVR-NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQ 358
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
+ K +EA + +M L++G Q + AS + +C + IA
Sbjct: 359 LNKSEEASHLLREM----------LVAGF-QPNSITLASIL--------PLC--ARIANL 397
Query: 389 CQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
Q G+ L R+ K ++ WN+++ YA++G++ +A+ + M +R+ V++ SLI
Sbjct: 398 -QHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLID 456
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQST 477
G+ AL M R G KPD T
Sbjct: 457 GYGNQGEGGVALALFKEMTRSGIKPDHVT 485
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 183/410 (44%), Gaps = 42/410 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
+L N++IS++ + + AR+LFD+M +R+ VSWN +I Y M EA +LFD M
Sbjct: 178 SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMW 237
Query: 125 ---PERDNFSWALMITCYTRKGKLEKARELLELV---PDKLDTACWNAVIAGYAKKGQFS 178
E +W ++ + G A L+ + P LD + + G
Sbjct: 238 FSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIR 297
Query: 179 DAEKVFNLMPVKDLVSY-------NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVS 231
+++ L SY N+++ Y++ + AL F + E ++ +WN ++S
Sbjct: 298 LGKEIHGLAIHS---SYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIIS 354
Query: 232 GFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR-----HGKITEARRLFDSMPC 282
G+ A L ++ PN+++ ++L AR HGK L
Sbjct: 355 GYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFK 414
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
+ WN+++ YA+ +I A ++ M +D V++T++I+GY G+ A ++ +M
Sbjct: 415 DYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEM 474
Query: 343 PCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTI--C---WNSMIAGFCQSGR 393
I + A++S + V E ++F ++ I C ++ M+ + ++G
Sbjct: 475 TRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGF 534
Query: 394 MDEALDLFRQMPKKNS-VSWNTM-----ISGYAQAGQMDSAENIFQAMEE 437
+ +A D+ MP K S +W T+ I G Q G+ +AE + + E
Sbjct: 535 LAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKW-AAEKLLEMKPE 583
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%)
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+SV +++ Y+ + A++I + + + + WN LI + +N L+ + + + M
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMV 136
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
+G +PD T+ G +H I S Y + L+V NALI+MY + +
Sbjct: 137 SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMG 196
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
A ++F + D +SWN++I+ YA G EAF+ F +M V +T+ + C
Sbjct: 197 IARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCL 256
Query: 588 HAG 590
G
Sbjct: 257 QTG 259
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/507 (29%), Positives = 256/507 (50%), Gaps = 17/507 (3%)
Query: 261 LCGFARHGKITEARRLFDSMPCKNVVSW----NAMIAAYAQDLQIDEAVKLFIKMPHKDG 316
LC AR+ +T A+ L + +V N ++ Y + A+++F +MPH+D
Sbjct: 12 LC--ARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 317 VSWTTIINGYIRV---GKLDEAREVYNQMPC--KDIAAETALMSGLIQTGRVDEASKMFN 371
++W +++ + GK D +AL+ G +D ++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 372 QL----STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDS 427
D + +S++ + + G ++ A +F + KN++SW M+SGYA++G+ +
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP-DQSTFXXXXXXXX 486
A +F+ + +N+ SW +LI+GF+Q+ +A M RE D
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 487 XXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNS 546
G Q+H ++ G+ + +F+SNALI MYAKC V +A+ +F+ + D++SW S
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 547 LISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF 606
LI G A +G A +A + M+S V P++VTF+G++ ACSH G +G +LF+ M +D+
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIG-EF 665
I P +HY+CL+DLLGR G L+EA N++ M + W +LL AC+ ++G
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 666 AAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQ 725
A +S + + S YI LSN++A A W +V R + + K PG S +EV+ + +
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489
Query: 726 CFLSDDSGRLRPETIQIILNAISAHMR 752
F + ++ E I +L + MR
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKLEEEMR 516
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 185/388 (47%), Gaps = 41/388 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMI-----AGYLHNSMVEEASKLFDVMP 125
N++++V+ K G S A Q+FD+M R+ ++W +++ A ++ +S
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 126 ERDNFSWALMITCYTRKGKLEKAREL-LELVPDKL--DTACWNAVIAGYAKKGQFSDAEK 182
D+F ++ ++ G ++ R++ + + D ++++ YAK G + A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
VF+ + VK+ +S+ +M++GY ++G+ AL F + KN+ SW ++SGFV SG A
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 243 RQLFEK-------IPNPNAVSWVTMLC--------GFARHGKITEARRLFDSMPCKNVVS 287
+F + I +P +S + C G HG + FDS V
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALG--FDSC----VFI 275
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
NA+I YA+ + A +F +M H+D VSWT++I G + G+ ++A +Y+ M +
Sbjct: 276 SNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGV 335
Query: 348 AAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFC------QSGRMDEA 397
GLI G V++ ++F + T+D S+ C +SG +DEA
Sbjct: 336 KPNEVTFVGLIYACSHVGFVEKGRELFQSM-TKDYGIRPSLQHYTCLLDLLGRSGLLDEA 394
Query: 398 LDLFRQMP-KKNSVSWNTMISGYAQAGQ 424
+L MP + +W ++S + G+
Sbjct: 395 ENLIHTMPFPPDEPTWAALLSACKRQGR 422
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 191/436 (43%), Gaps = 68/436 (15%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N ++ Y K G S A +VF+ MP +D +++ S+L Q G L F + + +
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 225 S-----WNLMVSGFVNSGDLSSARQ-----LFEKIPNPNAV--SWVTMLCGFARHGKITE 272
++ +V N G + RQ + + N V S V M +A+ G +
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDM---YAKCGLLNS 158
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKL 332
A+ +FDS+ KN +SW AM++ YA+ + +EA++LF +P K+ SWT +I+G+++ GK
Sbjct: 159 AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 218
Query: 333 DEAREVYNQM------------------PCKDIAAETA--LMSGLI-------------- 358
EA V+ +M C ++AA A + GL+
Sbjct: 219 LEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNA 278
Query: 359 ------QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKN 408
+ V A +F+++ RD + W S+I G Q G+ ++AL L+ M K N
Sbjct: 279 LIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN 338
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEE----RNIVSWNSLITGFLQNSLYFDALKSLV 464
V++ +I + G ++ +FQ+M + R + + + L S D ++L+
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKC- 523
PD+ T+ Q+G ++ ++++ S + D L +YA
Sbjct: 399 --HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASAS 456
Query: 524 --GRVESAEQVFTAIE 537
G+V A + +E
Sbjct: 457 LWGKVSEARRKLGEME 472
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 151/331 (45%), Gaps = 56/331 (16%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER 127
V +S++ ++AK G ++ A+ +FD + +N +SW M++GY + EEA +LF ++P +
Sbjct: 141 VVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVK 200
Query: 128 DNFSWALMITCYTRKGK-LEKARELLELVPDKLDT-----------ACWN--AVIAG--- 170
+ +SW +I+ + + GK LE E+ +++D AC N A IAG
Sbjct: 201 NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQV 260
Query: 171 ----------------------YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
YAK A+ +F+ M +D+VS+ S++ G Q+G+
Sbjct: 261 HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQA 320
Query: 209 GLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVT 259
AL ++ M + N V++ ++ + G + R+LF+ + P+ +
Sbjct: 321 EKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC 380
Query: 260 MLCGFARHGKITEARRLFDSMP-CKNVVSWNAMIAAYAQ----DLQIDEAVKLFIKMPHK 314
+L R G + EA L +MP + +W A+++A + + I A L K
Sbjct: 381 LLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLK 440
Query: 315 DGVSWTTIINGYIRV---GKLDEAREVYNQM 342
D ++ + N Y GK+ EAR +M
Sbjct: 441 DPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 166/382 (43%), Gaps = 74/382 (19%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVF----------------------------- 77
GK G A++VF H++ + + S+++
Sbjct: 49 GKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVF 108
Query: 78 -------AKNGKISDARQ-----LFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
A G I RQ + + + +V ++++ Y ++ A +FD +
Sbjct: 109 SALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK-SSLVDMYAKCGLLNSAKAVFDSIR 167
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFN 185
++ SW M++ Y + G+ E+A EL ++P K + W A+I+G+ + G+ +A VF
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVK-NLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 186 LM-----PVKDLVSYNSM----------LAGYTQNGKMGLALHFFEKMAEKNVVSWNLMV 230
M + D + +S+ +AG +G + +AL F + V N ++
Sbjct: 227 EMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG-LVIALGF-----DSCVFISNALI 280
Query: 231 SGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----V 286
+ D+ +A+ +F ++ + + VSW +++ G A+HG+ +A L+D M V V
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQ 341
++ +I A + +++ +LF M G+ +T +++ R G LDEA + +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 342 MP-CKDIAAETALMSGLIQTGR 362
MP D AL+S + GR
Sbjct: 401 MPFPPDEPTWAALLSACKRQGR 422
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKI 83
H L I VF N I K V A +FS H+++V++ S+I A++G+
Sbjct: 261 HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQA 320
Query: 84 SDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALM-ITC 138
A L+D M + N V++ +I H VE+ +LF M + +L TC
Sbjct: 321 EKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC 380
Query: 139 YT----RKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQ 176
R G L++A L+ +P D W A+++ ++G+
Sbjct: 381 LLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/544 (30%), Positives = 276/544 (50%), Gaps = 33/544 (6%)
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP--NPNAVSWVT 259
+TQ + +H FE VV + + + ++ S L A F +IP N SW T
Sbjct: 22 HTQQVHAKVIIHGFED----EVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNT 77
Query: 260 MLCGFARHGKI--TEARRLFDSMP--CKNVVSWNAMIAAYA-QDLQIDEAVKLFIKMPHK 314
+L G+++ ++ L++ M C V S+N + A A L + E L + K
Sbjct: 78 ILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMK 137
Query: 315 DGVS-----WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKM 369
+G+ +++ Y ++G ++ A++V++++P ++ LM G ++ + E ++
Sbjct: 138 NGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRL 197
Query: 370 FNQLSTRDT---------ICW----NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
F + RDT IC ++ AG + G+ + + R ++ ++I
Sbjct: 198 FCLM--RDTGLALDALTLICLVKACGNVFAG--KVGKCVHGVSIRRSFIDQSDYLQASII 253
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
Y + +D+A +F+ +RN+V W +LI+GF + +A M RE P+Q
Sbjct: 254 DMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC 313
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T + G +H Y++++G D + I MYA+CG ++ A VF +
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMM 373
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
++ISW+S+I+ + +NG EA F +M S+ VVP+ VTF+ +LSACSH+G +G
Sbjct: 374 PERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGW 433
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
F+ M D+ + P EHY+C+VDLLGR G + EA + + M VK A WG+LL ACR+
Sbjct: 434 KQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRI 493
Query: 657 HKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
HK +++ A +L +EP +S Y+ LSN++A+AG WE V +R M K K G S
Sbjct: 494 HKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Query: 717 WIEV 720
EV
Sbjct: 554 ATEV 557
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 153/323 (47%), Gaps = 28/323 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
GK+GK V + + I ++ S+I ++ K + +AR+LF+ RN+V W T+I+
Sbjct: 226 GKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLIS 285
Query: 107 GYLHNSMVEEASKLF------DVMPERDNFSWALMITCYT----RKGKLEKARELLELVP 156
G+ EA LF ++P + + A++++C + R GK + +
Sbjct: 286 GFAKCERAVEAFDLFRQMLRESILPNQCTLA-AILVSCSSLGSLRHGKSVHGYMIRNGI- 343
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
++D + + I YA+ G A VF++MP ++++S++SM+ + NG AL F
Sbjct: 344 -EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFH 402
Query: 217 KMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARH 267
KM +NV V++ ++S +SG++ + FE + P + M+ R
Sbjct: 403 KMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRA 462
Query: 268 GKITEARRLFDSMPCKNVVS-WNAMIAAY----AQDLQIDEAVKLFIKMPHKDGVSWTTI 322
G+I EA+ D+MP K + S W A+++A DL + A KL P K V + +
Sbjct: 463 GEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSV-YVLL 521
Query: 323 INGYIRVGKLDEAREVYNQMPCK 345
N Y G + V +M K
Sbjct: 522 SNIYADAGMWEMVNCVRRKMGIK 544
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 179/414 (43%), Gaps = 55/414 (13%)
Query: 49 LGKVEEAVRV----FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTM 104
LG +E + + N + K+ S++ ++A+ G + A+++FD++ RN V W +
Sbjct: 122 LGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVL 181
Query: 105 IAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTR------KGKLEKARELLELVPDK 158
+ GYL S E +LF +M + AL + C + GK+ K + +
Sbjct: 182 MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF 241
Query: 159 LDTACW--NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
+D + + ++I Y K +A K+F +++V + ++++G+ + + A F
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301
Query: 217 KMAEKNVVSWNLMVSG-FVNSGDLSSARQ-------LFEKIPNPNAVSWVTMLCGFARHG 268
+M ++++ ++ V+ L S R + +AV++ + + +AR G
Sbjct: 302 QMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCG 361
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIR 328
I AR +FD MP +NV+SW++MI A+ + +EA+ F KM ++ V +
Sbjct: 362 NIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTF----- 416
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC------WN 382
+L+S +G V E K F + TRD +
Sbjct: 417 ----------------------VSLLSACSHSGNVKEGWKQFESM-TRDYGVVPEEEHYA 453
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAGQMDSAENIFQAM 435
M+ ++G + EA MP K S W ++S ++D A I + +
Sbjct: 454 CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 155/357 (43%), Gaps = 34/357 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV------- 99
+LG +E A +VF +N V + ++ + K K + +LF M L
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLI 214
Query: 100 ----SWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELV 155
+ + AG + + + ++ ++ A +I Y + L+ AR+L E
Sbjct: 215 CLVKACGNVFAGKVGKCV--HGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETS 272
Query: 156 PDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLA---------GYTQNG 206
D+ + W +I+G+AK + +A +F M + ++ LA G ++G
Sbjct: 273 VDR-NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHG 331
Query: 207 KMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFAR 266
K + + E + V++ + + G++ AR +F+ +P N +SW +M+ F
Sbjct: 332 K-SVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGI 390
Query: 267 HGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV----- 317
+G EA F M +NV V++ ++++A + + E K F M GV
Sbjct: 391 NGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEE 450
Query: 318 SWTTIINGYIRVGKLDEAREVYNQMPCKDIA-AETALMSGLIQTGRVDEASKMFNQL 373
+ +++ R G++ EA+ + MP K +A A AL+S VD A ++ +L
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 246 bits (628), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 197/340 (57%), Gaps = 2/340 (0%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
++++ Y +G++++A +F+ M ERN+VSW ++I+GF Q LK M +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P+ TF G +H L G + L +SN+LI+MY KCG ++ A ++
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGL 591
F D++SWNS+I+GYA +G A++A + F+ M+ + PD +T++G+LS+C HAGL
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+G F M E ++P HYSCLVDLLGR G L+EA ++ M +K N+ +WGSLL
Sbjct: 339 VKEGRKFFNLMAEH-GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Query: 652 GACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
+CRVH ++ G AA LEP A+ ++ L+N++A G W+E +R LM+DK
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKT 457
Query: 712 LPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHM 751
PGCSWIE+ N + F ++D R I +L+ + HM
Sbjct: 458 NPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHM 497
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTII 323
G++ A ++F+ MP +NVVSW AMI+ +AQ+ ++D +KL+ KM + ++T ++
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 324 NGYIRVGKLDEAREVYNQ---MPCKD-IAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
+ G L + R V+ Q M K + +L+S + G + +A ++F+Q S +D +
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 380 CWNSMIAGFCQSGRMDEALDLFR-QMPKK----NSVSWNTMISGYAQAGQMDSAENIFQA 434
WNSMIAG+ Q G +A++LF MPK +++++ ++S AG + F
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 435 MEERNI 440
M E +
Sbjct: 349 MAEHGL 354
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 130/243 (53%), Gaps = 25/243 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PE 126
+S++ ++ +G++ +A ++F++M +RN+VSW MI+G+ V+ KL+ M +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 127 RDNFSWALMITCYTRKGKLEKAR----ELLEL-VPDKLDTACWNAVIAGYAKKGQFSDAE 181
+++++ +++ T G L + R + L + + L + N++I+ Y K G DA
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHIS--NSLISMYCKCGDLKDAF 276
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLMVSGFVNS 236
++F+ KD+VS+NSM+AGY Q+G A+ FE M K + +++ ++S ++
Sbjct: 277 RIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHA 336
Query: 237 GDLSSARQLFEKI------PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWN 289
G + R+ F + P N S + L G R G + EA L ++MP K N V W
Sbjct: 337 GLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLG--RFGLLQEALELIENMPMKPNSVIWG 394
Query: 290 AMI 292
+++
Sbjct: 395 SLL 397
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 41/271 (15%)
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM- 218
D ++++ Y G+ +A KVF MP +++VS+ +M++G+ Q ++ + L + KM
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 219 ---AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKIT 271
++ N ++ ++S SG L R + + + S++ +++ + + G +
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF-IKMPHK----DGVSWTTIINGY 326
+A R+FD K+VVSWN+MIA YAQ +A++LF + MP D +++ +++
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIA 386
G + E R+ +N M AE L L N S C ++
Sbjct: 334 RHAGLVKEGRKFFNLM------AEHGLKPEL-------------NHYS-----CLVDLLG 369
Query: 387 GFCQSGRMDEALDLFRQMP-KKNSVSWNTMI 416
F G + EAL+L MP K NSV W +++
Sbjct: 370 RF---GLLQEALELIENMPMKPNSVIWGSLL 397
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
+ G+ H LK G+I+D+++ ++L+ +Y G VE+A +VF + +++SW ++ISG+
Sbjct: 137 RTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGF 196
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
A K + +M P+ TF +LSAC+ +G QG + C ++
Sbjct: 197 AQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSV-HCQTLHMGLKSY 255
Query: 612 AEHYSCLVDLLGRMGRLEEAFNV 634
+ L+ + + G L++AF +
Sbjct: 256 LHISNSLISMYCKCGDLKDAFRI 278
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 21/278 (7%)
Query: 12 GENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYN 71
G N + S H L + V+ + ++ G+VE A +VF +N+V++
Sbjct: 131 GLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWT 190
Query: 72 SMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMI-----AGYLHNSMVEEASKLFD 122
+MIS FA+ ++ +L+ KM S N ++ ++ +G L L
Sbjct: 191 AMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHM 250
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEK 182
+ + S +L I+ Y + G L+ A + + +K D WN++IAGYA+ G A +
Sbjct: 251 GLKSYLHISNSL-ISMYCKCGDLKDAFRIFDQFSNK-DVVSWNSMIAGYAQHGLAMQAIE 308
Query: 183 VFNLMPVK-----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS----WNLMVSGF 233
+F LM K D ++Y +L+ G + FF MAE + ++ +V
Sbjct: 309 LFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLL 368
Query: 234 VNSGDLSSARQLFEKIP-NPNAVSWVTMLCGFARHGKI 270
G L A +L E +P PN+V W ++L HG +
Sbjct: 369 GRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDV 406
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 278/569 (48%), Gaps = 34/569 (5%)
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQ 244
+L+ L+ YN ML L F ++ + + N + + S + R+
Sbjct: 4 SLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKS--IGRLRK 61
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
+ E G HG +A FDS VS N+++ YA +I+
Sbjct: 62 VIE---------------GEKVHGYAVKAGLEFDSY-----VS-NSLMGMYASLGKIEIT 100
Query: 305 VKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETALMSGLIQ 359
K+F +MP +D VSW +I+ Y+ G+ ++A V+ +M + D + +S
Sbjct: 101 HKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSA 160
Query: 360 TGRVDEASKMFNQLSTR---DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
++ +++ + T N+++ FC+ G +D+A +F M KN W +M+
Sbjct: 161 LKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV 220
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
GY G++D A +F+ +++V W +++ G++Q + + +AL+ M G +PD
Sbjct: 221 FGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNF 280
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
+ G +H YI ++ D V AL+ MYAKCG +E+A +VF I
Sbjct: 281 VLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI 340
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
+ D SW SLI G A+NG + A + +M + V D +TF+ +L+AC+H G +G
Sbjct: 341 KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGR 400
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV---RGMDVKANAGLWGSLLGA 653
+F M E ++P +EH SCL+DLL R G L+EA ++ RG + ++ SLL A
Sbjct: 401 KIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSA 460
Query: 654 CRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
R + N++I E A +L ++E ++S + L++++A A RWE+V +R M+D K P
Sbjct: 461 ARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFP 520
Query: 714 GCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
GCS IE+ F+ D P+ +I
Sbjct: 521 GCSSIEIDGVGHEFIVGDDLLSHPKMDEI 549
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 202/434 (46%), Gaps = 46/434 (10%)
Query: 46 LGKLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
+G+L KV E +V + L NS++ ++A GKI ++FD+M QR++VSW
Sbjct: 56 IGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSW 115
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNFSW------ALMITCYTRKGKLEKARELLELV 155
N +I+ Y+ N E+A +F M + N + + + C K LE + V
Sbjct: 116 NGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK-NLEIGERIYRFV 174
Query: 156 PDKLDTAC--WNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
+ + + NA++ + K G A VF+ M K++ + SM+ GY G++ A
Sbjct: 175 VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARV 234
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFAR--- 266
FE+ K+VV W M++G+V A +LF + P+ V++L G A+
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Query: 267 -------HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSW 319
HG I E R D V A++ YA+ I+ A+++F ++ +D SW
Sbjct: 295 LEQGKWIHGYINENRVTVDK------VVGTALVDMYAKCGCIETALEVFYEIKERDTASW 348
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLST 375
T++I G G A ++Y +M + + A+++ G V E K+F+ ++
Sbjct: 349 TSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTE 408
Query: 376 RDTICWNS-----MIAGFCQSGRMDEALDLFRQMPKKNSVS----WNTMISGYAQAGQMD 426
R + S +I C++G +DEA +L +M ++ + + +++S G +
Sbjct: 409 RHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVK 468
Query: 427 SAENIFQAMEERNI 440
AE + + +E+ +
Sbjct: 469 IAERVAEKLEKVEV 482
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 153/352 (43%), Gaps = 44/352 (12%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+++ +F K G + AR +FD M +N+ W +M+ GY+ ++EA LF+ P +D
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 131 SWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLM 187
W M+ Y + + ++A EL + + D +++ G A+ G + + +
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 188 ----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSAR 243
D V +++ Y + G + AL F ++ E++ SW ++ G +G A
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 244 QLFEKIPNP----NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
L+ ++ N +A+++V +L G + E R++F SM ++ V
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQ------------ 413
Query: 300 QIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKD----IAAETALMS 355
P + S +I+ R G LDEA E+ ++M + + +L+S
Sbjct: 414 ------------PKSEHCS--CLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLS 459
Query: 356 GLIQTGRVDEASKMFNQL---STRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
G V A ++ +L D+ + + + + R ++ ++ R+M
Sbjct: 460 AARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKM 511
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 218/396 (55%), Gaps = 7/396 (1%)
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+D S++ + G + A +F K+ +WN++++ YA+AG +D A +F M
Sbjct: 95 KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEM 154
Query: 436 EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-----KPDQSTFXXXXXXXXXXXX 490
ERN++SW+ LI G++ Y +AL M +P++ T
Sbjct: 155 PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGA 214
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV-DLISWNSLIS 549
+ G +H YI K D+ + ALI MYAKCG +E A++VF A+ D+ +++++I
Sbjct: 215 LEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMIC 274
Query: 550 GYALNGYAIEAFKAFKQML-SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAI 608
A+ G E F+ F +M S+ + P+ VTF+G+L AC H GL N+G FK M+E+F I
Sbjct: 275 CLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGI 334
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAM 668
P +HY C+VDL GR G ++EA + + M ++ + +WGSLL R+ +++ E A
Sbjct: 335 TPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALK 394
Query: 669 RLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL 728
RL EL+P N+ Y+ LSN++A+ GRW EV+ +R M K K+PGCS++EV+ + F+
Sbjct: 395 RLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFV 454
Query: 729 SDDSGRLRPETIQIILNAISAHMRDKFNVFNMQSVF 764
D + E I +L+ I +R+ V + + V
Sbjct: 455 VGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVL 490
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 163/325 (50%), Gaps = 27/325 (8%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
G + A RVF ++ K+L +NS+++ +AK G I DAR+LFD+M +RN++SW+ +I GY+
Sbjct: 111 GDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 110 HNSMVEEASKLFDVM--PE------RDN-FSWALMITCYTRKGKLEKARELLELVPD--- 157
+EA LF M P+ R N F+ + +++ R G LE+ + + +
Sbjct: 171 MCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHV 230
Query: 158 KLDTACWNAVIAGYAKKGQFSDAEKVFN-LMPVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
++D A+I YAK G A++VFN L KD+ +Y++M+ G F
Sbjct: 231 EIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFS 290
Query: 217 KMA-----EKNVVSWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAVSWVTMLCGFAR 266
+M N V++ ++ V+ G ++ + F+ + P+ + M+ + R
Sbjct: 291 EMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGR 350
Query: 267 HGKITEARRLFDSMPCK-NVVSWNAMIAAYAQ--DLQIDE-AVKLFIKMPHKDGVSWTTI 322
G I EA SMP + +V+ W ++++ D++ E A+K I++ + ++ +
Sbjct: 351 SGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLL 410
Query: 323 INGYIRVGKLDEAREVYNQMPCKDI 347
N Y + G+ E + + ++M K I
Sbjct: 411 SNVYAKTGRWMEVKCIRHEMEVKGI 435
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 50/229 (21%)
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS 318
++L ++ G + A+R+FD K++ +WN+++ AYA+ ID+A KLF +MP ++ +S
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVIS 161
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCK--------------------------------- 345
W+ +INGY+ GK EA +++ +M
Sbjct: 162 WSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWV 221
Query: 346 -----------DIAAETALMSGLIQTGRVDEASKMFNQL-STRDTICWNSMIAGFCQSGR 393
DI TAL+ + G ++ A ++FN L S +D +++MI G
Sbjct: 222 HAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGL 281
Query: 394 MDEALDLFRQMP-----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
DE LF +M NSV++ ++ G ++ ++ F+ M E
Sbjct: 282 TDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE 330
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 40/248 (16%)
Query: 443 WNSLITGFLQN--SLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
WN +I + N S + S+ L R + PD TF +G + H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA------- 552
IL G D FV +L+ MY+ CG + SA++VF DL +WNS+++ YA
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 553 -------------------LNGYAI-----EAFKAFKQMLSEE-----VVPDQVTFIGML 583
+NGY + EA F++M + V P++ T +L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
SAC G QG ++ + +E + L+D+ + G LE A V + K +
Sbjct: 207 SACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 644 AGLWGSLL 651
+ +++
Sbjct: 266 VKAYSAMI 273
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 245/487 (50%), Gaps = 48/487 (9%)
Query: 303 EAVKLF----IKMPHKDGVS-WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL 357
EA +LF I+ K GVS + ++ IR+ + + VY M E +M+ +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 358 ----IQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM--------- 404
++ G + +A ++F+++ R+ + S+I+GF G EA +LF+ M
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCET 224
Query: 405 -------------------------PKKNSVSWNTMISG-----YAQAGQMDSAENIFQA 434
K V NT +S Y++ G ++ A F+
Sbjct: 225 HTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFEC 284
Query: 435 MEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVG 494
M E+ V+WN++I G+ + +AL L M G DQ T ++
Sbjct: 285 MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELT 344
Query: 495 NQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALN 554
Q H ++++G+ +++ + AL+ Y+K GRV++A VF + ++ISWN+L+ GYA +
Sbjct: 345 KQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANH 404
Query: 555 GYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEH 614
G +A K F++M++ V P+ VTF+ +LSAC+++GL+ QG ++F M E I+P A H
Sbjct: 405 GRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH 464
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELE 674
Y+C+++LLGR G L+EA +R +K +W +LL ACR+ +NLE+G A +L +
Sbjct: 465 YACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMG 524
Query: 675 PHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGR 734
P NY+ + NM+ G+ E + + K +P C+W+EV +Q FLS D
Sbjct: 525 PEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFD 584
Query: 735 LRPETIQ 741
ET++
Sbjct: 585 SYNETVK 591
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 194/416 (46%), Gaps = 38/416 (9%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ SN N ++ + K G I DAR+LFD++ +RNL S+ ++I+G+++ EA
Sbjct: 149 MMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEA 208
Query: 118 SKLFDVMPER----DNFSWALMITCYTRKGKLEKAREL----LEL-VPDKLDTACWNAVI 168
+LF +M E + ++A+M+ G + ++L L+L V D +C +I
Sbjct: 209 FELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSC--GLI 266
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----V 224
Y+K G DA F MP K V++N+++AGY +G AL M + V
Sbjct: 267 DMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQF 326
Query: 225 SWNLMVSGFVNSGDLSSARQ----LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM 280
+ ++M+ L +Q L V+ ++ +++ G++ AR +FD +
Sbjct: 327 TLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKL 386
Query: 281 PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGKLDEAR 336
P KN++SWNA++ YA + +AVKLF KM + V++ +++ G ++
Sbjct: 387 PRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGW 446
Query: 337 EVYNQMP----CKDIAAETALMSGLI-QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
E++ M K A A M L+ + G +DEA + + T+ +M A +
Sbjct: 447 EIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTV---NMWAALLNA 503
Query: 392 GRMDEALDLFRQMPKK-------NSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
RM E L+L R + +K ++ M + Y G+ A + + +E + +
Sbjct: 504 CRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGL 559
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 16 KIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMIS 75
K+++T H I + + + K G+V+ A VF KN++++N+++
Sbjct: 340 KLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMG 399
Query: 76 VFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS 131
+A +G+ +DA +LF+KM N+ V++ +++ ++ + E+ ++F M E
Sbjct: 400 GYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIK 459
Query: 132 -----WALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFS----DAEK 182
+A MI R G L++A + P K W A++ + AEK
Sbjct: 460 PRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEK 519
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
++ + P K L +Y M Y GK A E + K +
Sbjct: 520 LYGMGPEK-LGNYVVMYNMYNSMGKTAEAAGVLETLESKGL 559
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 207/353 (58%), Gaps = 12/353 (3%)
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS------LYFDALK 461
+S+ T++ Y+ A +F + +R+ VSWN L + +L+N + FD +K
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 462 SLVLMGREG-KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMY 520
+ V +G KPD T G Q+H++I ++G L +SN L++MY
Sbjct: 207 NDV----DGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 521 AKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFI 580
++CG ++ A QVF + +++SW +LISG A+NG+ EA +AF +ML + P++ T
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322
Query: 581 GMLSACSHAGLANQGLDLFKCMVE-DFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
G+LSACSH+GL +G+ F M +F I+P HY C+VDLLGR L++A+++++ M+
Sbjct: 323 GLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSME 382
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
+K ++ +W +LLGACRVH ++E+GE L EL+ A +Y+ L N ++ G+WE+V
Sbjct: 383 MKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTE 442
Query: 700 LRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
LR LM++KR PGCS IE+Q + F+ DD R E I +L I+ ++
Sbjct: 443 LRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLK 495
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 159/349 (45%), Gaps = 32/349 (9%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
LG ++ ++FS+ + + +++ +++ +DA ++FD++ +R+ VSWN + + Y
Sbjct: 130 LGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCY 189
Query: 109 LHNSMVEEASKLFDVMP-------ERDNFSWALMITCYTRKGKLEKARELLELVPDKLDT 161
L N + LFD M + D + L + G L+ +++ + + + +
Sbjct: 190 LRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLS 249
Query: 162 ACW---NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
N +++ Y++ G A +VF M +++VS+ ++++G NG A+ F +M
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
Query: 219 AEKNVVSWNLMVSGFV----NSGDLSSARQLFEKI--------PNPNAVSWVTMLCGFAR 266
+ + ++G + +SG ++ F+++ PN + V L G AR
Sbjct: 310 LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRAR 369
Query: 267 HGKITEARRLFDSMPCK-NVVSWNAMIAA--YAQDLQIDE-AVKLFIKMPHKDGVSWTTI 322
+ +A L SM K + W ++ A D+++ E + I++ ++ + +
Sbjct: 370 --LLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLL 427
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAETAL----MSGLIQTGRVDEAS 367
+N Y VGK ++ E+ + M K I + + G + VD+ S
Sbjct: 428 LNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVS 476
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 138/341 (40%), Gaps = 71/341 (20%)
Query: 148 ARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
+R L L+P ++ +C +VF+ L N+M+ ++ +
Sbjct: 51 SRLALSLIPRDINYSC------------------RVFSQRLNPTLSHCNTMIRAFSLSQT 92
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGF-----VNSGDLSSARQLFEKIPNPNAVS----WV 258
F + + + N + S F + SGDL Q+ KI + +S
Sbjct: 93 PCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMT 152
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----- 313
T++ ++ T+A ++FD +P ++ VSWN + + Y ++ + + + LF KM +
Sbjct: 153 TLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGC 212
Query: 314 --KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN 371
DGV+ + +G LD ++V+ D E L L
Sbjct: 213 VKPDGVTCLLALQACANLGALDFGKQVH------DFIDENGLSGAL-------------- 252
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI 431
LS N++++ + + G MD+A +F M ++N VSW +ISG A G A
Sbjct: 253 NLS-------NTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEA 305
Query: 432 FQAMEERNIVSWNSLITGFL----------QNSLYFDALKS 462
F M + I +TG L + ++FD ++S
Sbjct: 306 FNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRS 346
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 120/263 (45%), Gaps = 24/263 (9%)
Query: 238 DLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
D++ + ++F + NP TM+ F+ E RLF S+ + + N + +++A
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL 120
Query: 298 DLQIDEA---------VKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA 348
I K+F D + TT+++ Y +A +V++++P +D
Sbjct: 121 KCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTV 180
Query: 349 AETALMSGLIQTGRVDEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQ 403
+ L S ++ R + +F+++ C ++A Q+ ALD +Q
Sbjct: 181 SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLA--LQACANLGALDFGKQ 238
Query: 404 MP---KKNSVSW-----NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL 455
+ +N +S NT++S Y++ G MD A +F M ERN+VSW +LI+G N
Sbjct: 239 VHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGF 298
Query: 456 YFDALKSLVLMGREGKKPDQSTF 478
+A+++ M + G P++ T
Sbjct: 299 GKEAIEAFNEMLKFGISPEEQTL 321
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G Q+H I G+++D + L+ +Y+ C A +VF I D +SWN L S Y
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 554 NGYAIEAFKAFKQMLSEE---VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEP 610
N + F +M ++ V PD VT + L AC++ G + G + +++ +
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD-FIDENGLSG 250
Query: 611 LAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+ LV + R G +++A+ V GM + N W +L+
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRER-NVVSWTALISG 292
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 166/582 (28%), Positives = 274/582 (47%), Gaps = 91/582 (15%)
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM- 311
NA+S +M G H +I + DS P + N +I Y++ L E+ +L +++
Sbjct: 15 NAISASSMRLGRVVHARIV---KTLDSPPPPFLA--NYLINMYSK-LDHPESARLVLRLT 68
Query: 312 PHKDGVSWTTIINGYIRVGKLDEAREVYNQM------------PC--KDIAAETALMSG- 356
P ++ VSWT++I+G + G A + +M PC K +A+ ++G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 357 -----LIQTGRV-------------------DEASKMFNQLSTRDTICWNSMIAGFCQSG 392
++ GR+ D+A K+F+++ R+ WN+ I+ G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 393 RMDEALDLFRQMPK----KNSVSW-----------------------------------N 413
R EA++ F + + NS+++ N
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 414 TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
+I Y + Q+ S+E IF M +N VSW SL+ ++QN + D S++ +
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN--HEDEKASVLYLRSRKDIV 306
Query: 474 DQSTFXXXXXXXXXXXXX--QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQ 531
+ S F ++G +H + +K+ +FV +AL+ MY KCG +E +EQ
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEV--VPDQVTFIGMLSACSHA 589
F + +L++ NSLI GYA G A F++M P+ +TF+ +LSACS A
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 590 GLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
G G+ +F M + IEP AEHYSC+VD+LGR G +E A+ ++ M ++ +WG+
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 650 LLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
L ACR+H ++G AA L +L+P ++ N++ LSN A AGRW E +R ++
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Query: 710 GKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHM 751
K G SWI V+NQ+ F + D + + IQ L + M
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 191/447 (42%), Gaps = 60/447 (13%)
Query: 48 KLGKVEEA--VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMI 105
+LG+V A V+ + L Y +I++++K AR + RN+VSW ++I
Sbjct: 23 RLGRVVHARIVKTLDSPPPPFLANY--LINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 106 AGYLHNSMVEEASKLF------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK- 158
+G N A F V+P F A R K L + +
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
LD + Y K DA K+F+ +P ++L ++N+ ++ +G+ A+ F +
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200
Query: 219 AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFD 278
+ ++ F+N+ W+ + G HG + R FD
Sbjct: 201 RRIDGHPNSITFCAFLNA-----------------CSDWLHLNLGMQLHGLVL--RSGFD 241
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREV 338
+ +V N +I Y + QI + +F +M K+ VSW +++ Y++ DE V
Sbjct: 242 T----DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ-NHEDEKASV 296
Query: 339 YNQMPCKDIA-----------AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
KDI + A M+GL + GR A + R ++++
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGL-ELGRSIHAHAV-KACVERTIFVGSALVDM 354
Query: 388 FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER------NIV 441
+ + G ++++ F +MP+KN V+ N++I GYA GQ+D A +F+ M R N +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 442 SWNSLIT-----GFLQNSL-YFDALKS 462
++ SL++ G ++N + FD+++S
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRS 441
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 112/502 (22%), Positives = 205/502 (40%), Gaps = 104/502 (20%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR 96
F N I KL E A V T +N+V++ S+IS A+NG S A F +M +
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 97 NLV--------------SWNTMIAG-------------------------YLHNSMVEEA 117
+V S + G Y + ++A
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKARE-------------------LLELVPDK 158
KLFD +PER+ +W I+ G+ +A E L D
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 159 L-------------------DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
L D + N +I Y K Q +E +F M K+ VS+ S++
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLV 282
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV- 258
A Y QN + A + + + V + + M+S +++ + +L I + V
Sbjct: 283 AAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342
Query: 259 -TMLCG------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
T+ G + + G I ++ + FD MP KN+V+ N++I YA Q+D A+ LF +M
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 312 ------PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK---DIAAE--TALMSGLIQT 360
P + +++ ++++ R G ++ ++++ M + AE + ++ L +
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462
Query: 361 GRVDEASKMFNQLSTRDTI-CWNSM-----IAGFCQSGRMDEALDLFRQMPKKNSVSWNT 414
G V+ A + ++ + TI W ++ + G Q G + A +LF+ P K+S +
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLL-AAENLFKLDP-KDSGNHVL 520
Query: 415 MISGYAQAGQMDSAENIFQAME 436
+ + +A AG+ A + + ++
Sbjct: 521 LSNTFAAAGRWAEANTVREELK 542
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
+ + + ++++ ++ K G I D+ Q FD+M ++NLV+ N++I GY H V+ A LF+
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 400
Query: 123 VM------PERDNFSWALMITCYTRKGKLEKARELLE-------LVPDKLDTACWNAVIA 169
M P + ++ +++ +R G +E ++ + + P +C ++
Sbjct: 401 EMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSC---IVD 457
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVS-YNSMLAGYTQNGKMGLALHFFE---KMAEKNVVS 225
+ G A + MP++ +S + ++ +GK L L E K+ K+ +
Sbjct: 458 MLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGN 517
Query: 226 WNLMVSGFVNSGDLSSARQLFEK-----IPNPNAVSWVTM 260
L+ + F +G + A + E+ I SW+T+
Sbjct: 518 HVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITV 557
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/543 (28%), Positives = 277/543 (51%), Gaps = 28/543 (5%)
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
+S + +V + GD+ ARQ+F+ + + V+W +++ +H + EA ++ M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 284 NVV----SWNAMIAAYA-----QDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDE 334
NV+ + +++ A++ ++ Q + + + + + + +++ Y++ GK E
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF----------NQLSTRDTI--CWN 382
A+ V +++ KD+ TAL+ G Q G EA K F N+ + + C N
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
G +G++ L + + + S ++++ Y + +D + +F+ +E N VS
Sbjct: 280 LKDIG---NGKLIHGL-MVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS 335
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
W SLI+G +QN AL M R+ KP+ T + G Q+H +
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
K G+ D + + LI +Y KCG + A VF + VD+IS N++I YA NG+ EA
Sbjct: 396 KYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALD 455
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
F++M++ + P+ VT + +L AC+++ L +G +LF +D I +HY+C+VDLL
Sbjct: 456 LFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLL 514
Query: 623 GRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYI 682
GR GRLEEA ++ + + LW +LL AC+VH+ +E+ E ++ E+EP + I
Sbjct: 515 GRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLI 573
Query: 683 TLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
+SN++A G+W V ++ M+D + K P SW+E+ + F++ D P + QI
Sbjct: 574 LMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFS-HPNSEQI 632
Query: 743 ILN 745
+ N
Sbjct: 633 LEN 635
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 175/364 (48%), Gaps = 30/364 (8%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------ 121
++ + ++ K G I ARQ+FD MS+R++V+WN++IA + + +EA +++
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 122 DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWN-----AVIAGYAKKGQ 176
+V+P D ++ + + ++ LEK + + L N A++ Y K G+
Sbjct: 160 NVLP--DEYTLSSVFKAFSDLS-LEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKNVVSWNLMVSGFVN 235
+A+ V + + KD+V +++ GY+Q G+ A+ F+ M EK + S ++
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 236 SGDLSS------ARQLFEKIPNPNAV-SWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
G+L L K +A+ S ++L + R + ++ R+F + N VSW
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
++I+ Q+ + + A+ F KM + + ++ + G + +E R+++ +
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 345 KDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
+ SGLI + G D A +F+ LS D I N+MI + Q+G EALDL
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 401 FRQM 404
F +M
Sbjct: 457 FERM 460
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 209/439 (47%), Gaps = 42/439 (9%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV----SWNT 103
K G ++ A +VF +++VT+NS+I+ K+ + +A +++ M N++ + ++
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 104 MIAGYLHNSMVEEASKLFDV-----MPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
+ + S+ +EA + + + + F + ++ Y + GK +A+ +L+ V +K
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSML--AGYTQNGKMGLAL 212
D A+I GY++KG+ ++A K F M V+ + +Y S+L G ++ G +
Sbjct: 231 -DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 213 H--FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGK- 269
H + E + S +++ ++ + + ++F+ I PN VSW +++ G ++G+
Sbjct: 290 HGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGRE 349
Query: 270 ---ITEARRLF-DSMPCKNVVSWNAM-----IAAYAQDLQIDEAVKLFIKMPHKDGVSWT 320
+ E R++ DS+ + +A+ +A + + QI V + +D + +
Sbjct: 350 EMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKY--GFDRDKYAGS 407
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQ-----LST 375
+I+ Y + G D AR V++ + D+ + ++ Q G EA +F + L
Sbjct: 408 GLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP 467
Query: 376 RDTICWNSMIAGFCQSGRM-DEALDLFRQMPKKNSVSWN----TMISGYAQAGQMDSAEN 430
D + ++A C + R+ +E +LF K + N M+ +AG+++ AE
Sbjct: 468 NDVTVLSVLLA--CNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEM 525
Query: 431 IFQAMEERNIVSWNSLITG 449
+ + ++V W +L++
Sbjct: 526 LTTEVINPDLVLWRTLLSA 544
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 265/517 (51%), Gaps = 19/517 (3%)
Query: 228 LMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITE----ARRLFDSMPCK 283
L VSG N G +S RQL + VS + R K ++ A ++FD MP
Sbjct: 62 LRVSG--NYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP 119
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD----GVSWTTIINGYIRV-----GKLDE 334
+V+SWN++++ Y Q + E + LF+++ D S+T + R+ G
Sbjct: 120 DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIH 179
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
++ V + ++ L+ + G +D+A +F + +DT+ WN+++A ++G++
Sbjct: 180 SKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKL 239
Query: 395 DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
+ L F QMP ++V++N +I + ++G ++A + M N SWN+++TG++ +
Sbjct: 240 ELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSE 299
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
+A + M G + D+ + G+ +H K G + + V++
Sbjct: 300 KSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVAS 359
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV- 573
ALI MY+KCG ++ AE +F + +LI WN +ISGYA NG +IEA K F Q+ E +
Sbjct: 360 ALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLK 419
Query: 574 PDQVTFIGMLSACSHAGLANQ-GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAF 632
PD+ TF+ +L+ CSH + + L F+ M+ ++ I+P EH L+ +G+ G + +A
Sbjct: 420 PDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAK 479
Query: 633 NVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASN--YITLSNMHAE 690
V++ + W +LLGAC K+L+ + A ++ EL + YI +SN++A
Sbjct: 480 QVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAY 539
Query: 691 AGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCF 727
RW EV ++R +MR+ K G SWI+ + + +
Sbjct: 540 HERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 161/330 (48%), Gaps = 38/330 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVM 124
NS++ + + + DA ++FD+M +++SWN++++GY+ + +E LF DV
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 125 PERDNFSWALMITCYTRKGKLEKA--RELLELVPDKLDTACWNAVIAGYAKKGQFSDAEK 182
P +F+ AL L +L++L +K + N +I Y K G DA
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
VF M KD VS+N+++A ++NGK+ L L FF +M + V++N ++ FV SGD ++A
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNA 273
Query: 243 RQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----------------- 285
Q+ +PNPN+ SW T+L G+ K EA F M V
Sbjct: 274 FQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAAL 333
Query: 286 --VSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMP 343
V W ++I A A L +D V V + +I+ Y + G L A ++ MP
Sbjct: 334 AVVPWGSLIHACAHKLGLDSRV-----------VVASALIDMYSKCGMLKHAELMFWTMP 382
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQL 373
K++ ++SG + G EA K+FNQL
Sbjct: 383 RKNLIVWNEMISGYARNGDSIEAIKLFNQL 412
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 169/430 (39%), Gaps = 109/430 (25%)
Query: 131 SWALMITCYTRKGKLEKARELLELVPD--KLD---------------------------- 160
SW+ ++ R G + R +EL+ D K D
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 161 -------TACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
T N+++ Y DA KVF+ MP D++S+NS+++GY Q+G+ +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFAR-H----G 268
F ++ +V PN S+ L AR H G
Sbjct: 143 LFLELHRSDVF---------------------------PNEFSFTAALAACARLHLSPLG 175
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIR 328
++ + + NVV N +I Y + +D+AV +F M KD VSW I+ R
Sbjct: 176 ACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSR 235
Query: 329 VGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
GKL+ ++QMP D L+ +++G + A ++ + + ++ WN+++ G+
Sbjct: 236 NGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGY 295
Query: 389 CQSGRMDEALDLFRQMPKKN-------------------SVSWNTMISG----------- 418
S + EA + F +M V W ++I
Sbjct: 296 VNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRV 355
Query: 419 ---------YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
Y++ G + AE +F M +N++ WN +I+G+ +N +A+K + +E
Sbjct: 356 VVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
Query: 470 G-KKPDQSTF 478
KPD+ TF
Sbjct: 416 RFLKPDRFTF 425
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 109/245 (44%), Gaps = 9/245 (3%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+HL LG + V N+V N +I ++ K G + DA +F M +++ VSWN
Sbjct: 169 LHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNA 228
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC 163
++A N +E F MP D ++ +I + + G A ++L +P+ +++
Sbjct: 229 IVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNP-NSSS 287
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPVKDL------VSYNSMLAGYTQNGKMGLALH-FFE 216
WN ++ GY + +A + F M + +S G +H
Sbjct: 288 WNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAH 347
Query: 217 KMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARR 275
K+ + VV + ++ + G L A +F +P N + W M+ G+AR+G EA +
Sbjct: 348 KLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIK 407
Query: 276 LFDSM 280
LF+ +
Sbjct: 408 LFNQL 412
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
GK+E + F + + VTYN +I F K+G ++A Q+ M N SWNT++ GY+
Sbjct: 237 GKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYV 296
Query: 110 HNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLD----T 161
++ EA++ F M D +S ++++ + L+ KL
Sbjct: 297 NSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG-SLIHACAHKLGLDSRV 355
Query: 162 ACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
+A+I Y+K G AE +F MP K+L+ +N M++GY +NG A+ F ++ ++
Sbjct: 356 VVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 182/666 (27%), Positives = 304/666 (45%), Gaps = 103/666 (15%)
Query: 164 WNAVIAGYA---KKG-QFSDAEKVFNLM-----PVKDLVSYNSMLAGYTQNGKMGLALHF 214
W V++GY+ + G QF+D VF ++ + L NS+ Y + G + L
Sbjct: 25 WREVVSGYSEIQRAGVQFNDP-FVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLRE 83
Query: 215 FEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI------PNPNAVSWVTMLC------ 262
F+ M ++ VSWN++V G ++ G F K+ PN + + V C
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD 143
Query: 263 GFARHGKITE------------------------ARRLFDSMPCKNVVSWNAMIAAYAQD 298
G HG + AR+LFD M ++V+SW+ +I +Y Q
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 299 LQIDEAVKLFIKMPHK-----DGVSWTTIINGYIRVGKLDEAREVYN-----QMPCKDIA 348
+ +KLF +M H+ D V+ T+++ + +D R V+ D+
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 349 AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM---- 404
+L+ + VD A ++F++ + R+ + WNS++AGF + R DEAL++F M
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 405 ----------------------PKK-------------NSVSWNTMISGYAQAGQMDSAE 429
P K N V+ +++I Y +D A
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
+ +M +++VS +++I+G +A+ M P+ T
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSA 440
Query: 490 XXQVGNQLHEY-ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
+ H I +S IND+ V +++ YAKCG +E A + F I ++ISW +I
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 500
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAI 608
S YA+NG +A F +M + P+ VT++ LSAC+H GL +GL +FK MVE+
Sbjct: 501 SAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH- 559
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGM--DVKANAGLWGSLLGACRVH-KNLEIGEF 665
+P +HYSC+VD+L R G ++ A +++ + DVKA A WG++L CR K L I
Sbjct: 560 KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSE 619
Query: 666 AAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQ 725
+ ELEP +S Y+ S+ A WE+V +R L+++++ + G S + N +
Sbjct: 620 VVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAK 679
Query: 726 CFLSDD 731
FL+ D
Sbjct: 680 RFLAGD 685
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 190/403 (47%), Gaps = 42/403 (10%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM-----P 125
NS++ ++A + +S AR+LFD+MS+R+++SW+ +I Y+ + KLF M
Sbjct: 164 NSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 222
Query: 126 ERDNFSWALMITCYTRKGKLEKAREL----LELVPDKLDTACWNAVIAGYAKKGQFSDAE 181
E D + ++ T ++ R + + D D N++I Y+K A
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 282
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
+VF+ +++VS+NS+LAG+ N + AL F M ++ V + V +
Sbjct: 283 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLR------ 336
Query: 242 ARQLFEKIPNP---------------NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
+ FE+ P P N V+ +++ + + +A + DSM K+VV
Sbjct: 337 VCKFFEQ-PLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVV 395
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKM-PHKDGVSWTTIINGY-----IRVGKLDEAREVYN 340
S + MI+ A + DEA+ +F M + ++ +++N +R K +
Sbjct: 396 SCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRR 455
Query: 341 QMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
+ DI+ T+++ + G ++ A + F+Q++ ++ I W +I+ + +G D+AL L
Sbjct: 456 SLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALAL 515
Query: 401 FRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERN 439
F +M +K N+V++ +S G + IF++M E +
Sbjct: 516 FDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED 558
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/511 (20%), Positives = 210/511 (41%), Gaps = 106/511 (20%)
Query: 121 FDVMPERDNFSWALMITCYTRKGKLEKAR---ELLELVPDKLDTACWNAVIAGYAKKGQF 177
FD M RD+ SW +++ G E+ L + + +T+ V+ +A + +
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTS--TLVLVIHACRSLW 141
Query: 178 SDAEKVFNLMPVKDLVSY----NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGF 233
D EK+ + NS+L Y + + A F++M+E++V+SW++++ +
Sbjct: 142 FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSY 200
Query: 234 VNSGDLSSARQLFEKI-----PNPNAVSWVTML----------CGFARHG---------- 268
V S + +LF+++ P+ V+ ++L G + HG
Sbjct: 201 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 269 ----------------KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP 312
+ A R+FD C+N+VSWN+++A + + + DEA+++F M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 313 HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI-------------AAETALMSGLIQ 359
+ + +RV K E +PCK I A ++L+
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFE-----QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTS 375
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF---RQMPKKNSV------ 410
VD+A + + ++ +D + ++MI+G +GR DEA+ +F R P +V
Sbjct: 376 CSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNA 435
Query: 411 ----------SW------------------NTMISGYAQAGQMDSAENIFQAMEERNIVS 442
W +++ YA+ G ++ A F + E+NI+S
Sbjct: 436 CSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIIS 495
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
W +I+ + N L AL M ++G P+ T+ + G + + ++
Sbjct: 496 WTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMV 555
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
+ + L + ++ M ++ G +++A ++
Sbjct: 556 EEDHKPSLQHYSCIVDMLSRAGEIDTAVELI 586
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 190/424 (44%), Gaps = 64/424 (15%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
++ NS+I +++K + A ++FD+ + RN+VSWN+++AG++HN +EA ++F +M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLELVPDK------------LDTACWNAVIAGYAK 173
+ A+ + T L + + +P K + +++I Y
Sbjct: 321 QE-----AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTS 375
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-KNVVSWNLMVSG 232
DA V + M KD+VS ++M++G G+ A+ F M + N ++ +++
Sbjct: 376 CSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNA 435
Query: 233 FVNSGDLSSAR-----QLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS 287
S DL +++ + + + +++ +A+ G I ARR FD + KN++S
Sbjct: 436 CSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIIS 495
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
W +I+AYA + D+A+ LF +M K GY +
Sbjct: 496 WTVIISAYAINGLPDKALALFDEMKQK----------GYT-----------------PNA 528
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTRDTIC----WNSMIAGFCQSGRMDEALDLFRQ 403
A +S G V + +F + D ++ ++ ++G +D A++L +
Sbjct: 529 VTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKN 588
Query: 404 MP---KKNSVSWNTMISGYAQAGQ--MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFD 458
+P K + +W ++SG + + ++E + + +E + S +G+L S F
Sbjct: 589 LPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCS-----SGYLLASSTFA 643
Query: 459 ALKS 462
A KS
Sbjct: 644 AEKS 647
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 153/348 (43%), Gaps = 61/348 (17%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
VF N I K V+ A RVF T +N+V++NS+++ F N + +A ++F M Q
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ 321
Query: 96 R---------------------------------------NLVSWNTMIAGYLHNSMVEE 116
N V+ +++I Y S+V++
Sbjct: 322 EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDD 381
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD--------KLDTACWNAVI 168
A + D M +D S + MI+ G+ ++A + + D L AC +
Sbjct: 382 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNAC---SV 438
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL 228
+ + +++ + + + D+ S++ Y + G + +A F+++ EKN++SW +
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTV 498
Query: 229 MVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKN 284
++S + +G A LF+++ PNAV+++ L G + + +F SM ++
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED 558
Query: 285 ----VVSWNAMIAAYAQDLQIDEAVKLFIKMPH--KDGVS-WTTIING 325
+ ++ ++ ++ +ID AV+L +P K G S W I++G
Sbjct: 559 HKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
K G +E A R F KN++++ +IS +A NG A LFD+M Q+ N V++
Sbjct: 473 AKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYL 532
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFS----WALMITCYTRKGKLEKARELLELVPD- 157
++ H +V++ +F M E D+ ++ ++ +R G+++ A EL++ +P+
Sbjct: 533 AALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPED 592
Query: 158 -KLDTACWNAVIAGYAK--KGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
K + W A+++G K +E V ++ ++ L S +LA T
Sbjct: 593 VKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASST 641
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/507 (28%), Positives = 252/507 (49%), Gaps = 52/507 (10%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD----GVSW 319
+ + G + AR+LFD + ++VVSW AMI+ +++ +A+ LF +M +D ++
Sbjct: 57 YLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTY 116
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAA----ETALMSGLIQTGRVDEASKMFNQLST 375
+++ +G L E +++ + + A +AL+S + G+++EA F+ +
Sbjct: 117 GSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE 176
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQM------PK----------------------- 406
RD + WN+MI G+ + D + LF+ M P
Sbjct: 177 RDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSEL 236
Query: 407 ----------KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGF-LQNSL 455
++S ++++ Y + G + +A + + ++R+++S +LITGF QN+
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 296
Query: 456 YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN-DLFVSN 514
DA M R K D+ +G Q+H + LKS I D+ + N
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 356
Query: 515 ALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
+LI MYAK G +E A F ++ D+ SW SLI+GY +G +A + +M E + P
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
+ VTF+ +LSACSH G G ++ M+ IE EH SC++D+L R G LEEA+ +
Sbjct: 417 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 476
Query: 635 VRGMD--VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAG 692
+R + V ++ WG+ L ACR H N+++ + AA +L +EP NYI L++++A G
Sbjct: 477 IRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANG 536
Query: 693 RWEEVERLRVLMRDK-RAGKLPGCSWI 718
W+ R LM++ K PG S +
Sbjct: 537 AWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 182/397 (45%), Gaps = 50/397 (12%)
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
C ++ + L+ ++ G V A K+F+++S RD + W +MI+ F + G +AL LF++
Sbjct: 44 CSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKE 103
Query: 404 MPKK---------------------------------------NSVSWNTMISGYAQAGQ 424
M ++ N + + ++S YA+ G+
Sbjct: 104 MHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGK 163
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX 484
M+ A F +M+ER++VSWN++I G+ N+ + LM EGKKPD TF
Sbjct: 164 MEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
++ ++LH +K G+ + +L+ Y KCG + +A ++ + DL+S
Sbjct: 224 SIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSC 283
Query: 545 NSLISGYA-LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV 603
+LI+G++ N +AF FK M+ + D+V ML C+ G + +
Sbjct: 284 TALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFAL 343
Query: 604 EDFAIEPLAEHYSCLVDLLGRMGRLEE---AFNVVRGMDVKANAGLWGSLLGACRVHKNL 660
+ I + L+D+ + G +E+ AF ++ DV++ W SL+ H N
Sbjct: 344 KSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRS----WTSLIAGYGRHGNF 399
Query: 661 E--IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWE 695
E I + M ++P++ + +++L + + G+ E
Sbjct: 400 EKAIDLYNRMEHERIKPNDVT-FLSLLSACSHTGQTE 435
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 123/527 (23%), Positives = 224/527 (42%), Gaps = 113/527 (21%)
Query: 59 FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
+N NL + +I ++ K G + AR+LFD++S+R++VSW MI+ + +A
Sbjct: 39 ITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDAL 98
Query: 119 KLFDVMPERD----NFSWALMITCYTRKGKLEKARELLELVPDKLDTA----CWNAVIAG 170
LF M D F++ ++ G L++ ++ V +K + A +A+++
Sbjct: 99 LLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV-EKGNCAGNLIVRSALLSL 157
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM------------ 218
YA+ G+ +A F+ M +DLVS+N+M+ GYT N + F+ M
Sbjct: 158 YARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTF 217
Query: 219 ----------------AEKNVVSWNL-----------MVSGFVNSGDLSSARQLFEKIPN 251
+E + ++ L +V+ +V G L++A +L E
Sbjct: 218 GSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKK 277
Query: 252 PNAVSWVTMLCGFARHGKIT-EARRLFDSM-----------------PCKNVVS------ 287
+ +S ++ GF++ T +A +F M C + S
Sbjct: 278 RDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQ 337
Query: 288 -----------------WNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVG 330
N++I YA+ +I++AV F +M KD SWT++I GY R G
Sbjct: 338 IHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHG 397
Query: 331 KLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTRDTI------- 379
++A ++YN+M + I +L+S TG+ + K+++ + + I
Sbjct: 398 NFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHL 457
Query: 380 -CWNSMIAGFCQSGRMDEALDLFRQ---MPKKNSVSWNTMISGYAQAGQMD---SAENIF 432
C M+A +SG ++EA L R + +S +W + + G + A
Sbjct: 458 SCIIDMLA---RSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQL 514
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG---KKPDQS 476
+ME R V++ +L + + N + +AL + LM G K P S
Sbjct: 515 LSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
NS+ GFC + ++ + L I Y + G + A +F + +R++V
Sbjct: 37 NSITNGFCSNLQLKDML-----------------IDLYLKQGDVKHARKLFDRISKRDVV 79
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
SW ++I+ F + + DAL M RE K +Q T+ + G Q+H +
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
K +L V +AL+++YA+CG++E A F +++ DL+SWN++I GY N A +F
Sbjct: 140 EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSF 199
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSA 585
F+ ML+E PD TF +L A
Sbjct: 200 SLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
+H + +G+ ++L + + LI +Y K G V+ A ++F I D++SW ++IS ++ GY
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
+A FK+M E+V +Q T+ +L +C G +G+ + + + L S
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR-S 152
Query: 617 CLVDLLGRMGRLEEA---FNVVRGMD-VKANAGLWGSLLGAC 654
L+ L R G++EEA F+ ++ D V NA + G AC
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 208/407 (51%), Gaps = 31/407 (7%)
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
D +T L+S + G +D K+FN + D +C +M+ + G + A LF MP
Sbjct: 142 DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP 201
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
+++ ++WN MISGYAQ G+ A N+F M+ + + L AL
Sbjct: 202 ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL----- 256
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
DQ G H YI ++ + ++ L+ +YAKCG
Sbjct: 257 --------DQ------------------GRWAHSYIERNKIKITVRLATTLVDLYAKCGD 290
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+E A +VF +E ++ +W+S ++G A+NG+ + + F M + V P+ VTF+ +L
Sbjct: 291 MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG 350
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG 645
CS G ++G F M +F IEP EHY CLVDL R GRLE+A ++++ M +K +A
Sbjct: 351 CSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAA 410
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+W SLL A R++KNLE+G A+ ++ ELE N Y+ LSN++A++ W+ V +R M+
Sbjct: 411 VWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMK 470
Query: 706 DKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHMR 752
K K PGCS +EV ++ F D + I + IS +R
Sbjct: 471 SKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLR 517
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 40/254 (15%)
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI 379
T +I+ Y +G LD +V+N +PC D TA+++ + G V A K+F + RD I
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVS------------------W----- 412
WN+MI+G+ Q G EAL++F M K N V+ W
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 413 ------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
T++ YA+ G M+ A +F MEE+N+ +W+S + G N L
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 461 KSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS-GYINDLFVSNALIAM 519
+ LM ++G P+ TF G + + + G L L+ +
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 520 YAKCGRVESAEQVF 533
YA+ GR+E A +
Sbjct: 387 YARAGRLEDAVSII 400
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 173/382 (45%), Gaps = 39/382 (10%)
Query: 71 NSMISVFAKNGKISD------ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF--- 121
+ ++ F K +SD A Q+ D+ + L + N+MI + + + E++ +
Sbjct: 38 DHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRI 97
Query: 122 -----DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL---DTACWNAVIAGYAK 173
D+ P DN++ ++ T E ++ + + D +I+ YA+
Sbjct: 98 LSSGNDLKP--DNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAE 155
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGF 233
G KVFN +P D V +M+ + G + A FE M E++ ++WN M+SG+
Sbjct: 156 LGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGY 215
Query: 234 VNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWN 289
G+ A +F + N V+ +++L + G + + R + +N +
Sbjct: 216 AQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIE-RNKIKIT 274
Query: 290 AMIAA-----YAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
+A YA+ +++A+++F M K+ +W++ +NG G ++ E+++ M
Sbjct: 275 VRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQ 334
Query: 345 KDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMD 395
+ +++ G G VDE + F+ + I + ++ + ++GR++
Sbjct: 335 DGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLE 394
Query: 396 EALDLFRQMP-KKNSVSWNTMI 416
+A+ + +QMP K ++ W++++
Sbjct: 395 DAVSIIQQMPMKPHAAVWSSLL 416
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 117/219 (53%), Gaps = 12/219 (5%)
Query: 229 MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
++S + G L S ++F IP P+ V M+ AR G + AR+LF+ MP ++ ++W
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
NAMI+ YAQ + EA+ +F M + +GV+ ++++ ++G LD+ R ++ +
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIER 268
Query: 345 KDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDL 400
I L + L+ + G +++A ++F + ++ W+S + G +G ++ L+L
Sbjct: 269 NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLEL 328
Query: 401 FRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAM 435
F M + N+V++ +++ G + G +D + F +M
Sbjct: 329 FSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 140/321 (43%), Gaps = 44/321 (13%)
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSL---YFDALKSLVLMGREGKKPDQSTFXXX 481
+D A I E+ + + NS+I ++ + FD + ++ G + KPD T
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGND-LKPDNYTVNFL 114
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL 541
+ G Q+H ++ G+ ND V LI++YA+ G ++S +VF +I C D
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 542 -------------------------------ISWNSLISGYALNGYAIEAFKAFKQMLSE 570
I+WN++ISGYA G + EA F M E
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 571 EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEE 630
V + V I +LSAC+ G +QG +E I+ + LVDL + G +E+
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 631 AFNVVRGMDVKANAGLWGSLLGACRVH----KNLEIGEFAAMRLSELEPHNASNYITLSN 686
A V GM+ K N W S L ++ K LE+ F+ M+ + P NA ++++
Sbjct: 294 AMEVFWGMEEK-NVYTWSSALNGLAMNGFGEKCLEL--FSLMKQDGVTP-NAVTFVSVLR 349
Query: 687 MHAEAGRWEEVERLRVLMRDK 707
+ G +E +R MR++
Sbjct: 350 GCSVVGFVDEGQRHFDSMRNE 370
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 136/292 (46%), Gaps = 40/292 (13%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
+LG ++ +VF++ + V +M++ A+ G + AR+LF+ M +R+ ++WN MI+
Sbjct: 154 AELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMIS 213
Query: 107 GYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAR---ELLELVPDKL 159
GY EA +F +M + + + +++ T+ G L++ R +E K+
Sbjct: 214 GYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKI 273
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
++ YAK G A +VF M K++ +++S L G NG L F M
Sbjct: 274 TVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMK 333
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
+ V PNAV++V++L G + G + E +R FDS
Sbjct: 334 QDGV---------------------------TPNAVTFVSVLRGCSVVGFVDEGQRHFDS 366
Query: 280 MPCK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-WTTIING 325
M + + + ++ YA+ ++++AV + +MP K + W+++++
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 216/424 (50%), Gaps = 43/424 (10%)
Query: 360 TGRVDEASKMFNQL-STRDTICWNSMIAGFCQSGRMDEAL--------------DLF--- 401
TG + A +F+ S T WN +I GF S ++ DLF
Sbjct: 52 TGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFN 111
Query: 402 ---------RQMPK--------------KNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+ +PK +++ +++ Y+ G ++ A +F M R
Sbjct: 112 FALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVR 171
Query: 439 NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
++VSWN +I F L+ AL MG EG D T +G LH
Sbjct: 172 DLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH 231
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
+ +FVSNALI MYAKCG +E+A VF + D+++WNS+I GY ++G+ +
Sbjct: 232 RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGV 291
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
EA F++M++ V P+ +TF+G+L CSH GL +G++ F+ M F + P +HY C+
Sbjct: 292 EAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCM 351
Query: 619 VDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNA 678
VDL GR G+LE + ++ + LW +LLG+C++H+NLE+GE A +L +LE NA
Sbjct: 352 VDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNA 411
Query: 679 SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
+Y+ ++++++ A + +R L+R +PG SWIE+ +Q+ F+ DD ++ PE
Sbjct: 412 GDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDD--KMHPE 469
Query: 739 TIQI 742
+ I
Sbjct: 470 SAVI 473
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 146/331 (44%), Gaps = 45/331 (13%)
Query: 25 KLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKN 80
++ + S+ +F N + ++ + + + + + I + S++ ++ N
Sbjct: 96 RMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSAN 155
Query: 81 GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMI 136
G + A ++FD+M R+LVSWN MI + H + +A ++ M D+++ ++
Sbjct: 156 GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALL 215
Query: 137 TCYTRKGKLEKARELLELVPDKLDTACW---NAVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
+ L L + D +C NA+I YAK G +A VFN M +D++
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVL 275
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN 253
++NSM+ GY +G A+ FF KM V PN
Sbjct: 276 TWNSMIIGYGVHGHGVEAISFFRKMVASGV---------------------------RPN 308
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKL- 307
A++++ +L G + G + E F+ M + NV + M+ Y + Q++ ++++
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMI 368
Query: 308 FIKMPHKDGVSWTTIINGYIRVGKLDEAREV 338
+ H+D V W T++ G ++ + E EV
Sbjct: 369 YASSCHEDPVLWRTLL-GSCKIHRNLELGEV 398
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 143/350 (40%), Gaps = 53/350 (15%)
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNAMIAAYAQDLQIDEAVKLFI 309
+P+ + + C + G ++ A+ LFD S WN +I ++ ++ +
Sbjct: 36 HPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYN 95
Query: 310 KM-----PHKDGVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQT 360
+M D ++ + R+ + + E++ + D T+L+
Sbjct: 96 RMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSAN 155
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS--------- 411
G V+ ASK+F+++ RD + WN MI F G ++AL ++++M +
Sbjct: 156 GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALL 215
Query: 412 ------------------------------WNTMISGYAQAGQMDSAENIFQAMEERNIV 441
N +I YA+ G +++A +F M +R+++
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVL 275
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
+WNS+I G+ + +A+ M G +P+ TF + G + H I
Sbjct: 276 TWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEI 334
Query: 502 LKSGY--INDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLI 548
+ S + ++ ++ +Y + G++E++ ++ A C D + W +L+
Sbjct: 335 MSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 129/301 (42%), Gaps = 66/301 (21%)
Query: 219 AEKNVVSWNLMVSGFVNSGD-----LSSARQLFEKIPNP--------------------- 252
++ + WN ++ GF NS L R L + P
Sbjct: 67 SDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 253 --------------NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQD 298
+A+ +++ ++ +G + A ++FD MP +++VSWN MI ++
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV 186
Query: 299 LQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET--- 351
++A+ ++ +M ++ D + +++ V L+ ++ ++ C DI E+
Sbjct: 187 GLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH-RIAC-DIRCESCVF 244
Query: 352 ---ALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM---- 404
AL+ + G ++ A +FN + RD + WNSMI G+ G EA+ FR+M
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER-----NIVSWNSLI-----TGFLQNS 454
+ N++++ ++ G + G + F+ M + N+ + ++ G L+NS
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 455 L 455
L
Sbjct: 365 L 365
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 9/162 (5%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISV 76
+ M M H++ VF N I K G +E A+ VF+ ++++T+NSMI
Sbjct: 224 LNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIG 283
Query: 77 FAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS- 131
+ +G +A F KM + N +++ ++ G H +V+E + F++M + + +
Sbjct: 284 YGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTP 343
Query: 132 ----WALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIA 169
+ M+ Y R G+LE + E++ D W ++
Sbjct: 344 NVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 172/579 (29%), Positives = 283/579 (48%), Gaps = 53/579 (9%)
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF-EK 217
+D A+++ Y K Q +DA KV + MP + + S N+ ++G +NG A F +
Sbjct: 64 VDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDA 123
Query: 218 MAEKNVVSWNLMVSGFVNSGDLSSARQL--------FEKIPNPNAVSWVTMLCGFARHGK 269
+ ++ + S GD+ QL FE + S V+M ++R G+
Sbjct: 124 RVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFE-MEVYVGTSLVSM---YSRCGE 179
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM-----PHKDGVSWTTIIN 324
A R+F+ +P K+VV++NA I+ ++ ++ +F M + V++ I
Sbjct: 180 WVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAIT 239
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
+ L R+++ + K+ ET ++ T +D SK CW S
Sbjct: 240 ACASLLNLQYGRQLHGLVMKKEFQFET-----MVGTALIDMYSK---------CRCWKS- 284
Query: 385 IAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI--- 440
A +F ++ +N +SWN++ISG GQ ++A +F+ ++ +
Sbjct: 285 ------------AYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPD 332
Query: 441 -VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
+WNSLI+GF Q +A K M P + G ++H
Sbjct: 333 SATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHG 392
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV--DLISWNSLISGYALNGYA 557
+++K+ D+FV +LI MY KCG A ++F E D + WN +ISGY +G
Sbjct: 393 HVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGEC 452
Query: 558 IEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSC 617
A + F+ + E+V P TF +LSACSH G +G +F+ M E++ +P EH C
Sbjct: 453 ESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGC 512
Query: 618 LVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHN 677
++DLLGR GRL EA V+ M +++ SLLG+CR H + +GE AAM+L+ELEP N
Sbjct: 513 MIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPEN 571
Query: 678 ASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
+ ++ LS+++A RWE+VE +R ++ K+ KLPG S
Sbjct: 572 PAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 201/432 (46%), Gaps = 44/432 (10%)
Query: 47 GKLGKVEEA----VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
KLG V + +V ++ T +++S++ K +++DA ++ D+M +R + S N
Sbjct: 42 AKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVN 101
Query: 103 TMIAGYLHNSMVEEASKLF-DVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---K 158
++G L N +A ++F D + + + G +E +L L +
Sbjct: 102 AAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFE 161
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
++ ++++ Y++ G++ A ++F +P K +V+YN+ ++G +NG M L F M
Sbjct: 162 MEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLM 221
Query: 219 -----AEKNVVSWNLMVSGFVNSGDLSSARQL----------FEKIPNPNAVS-WVTMLC 262
E N V++ ++ + +L RQL FE + + + C
Sbjct: 222 RKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRC 281
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVS 318
+ + TE + +N++SWN++I+ + Q + AV+LF K+ + D +
Sbjct: 282 WKSAYIVFTELKD------TRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSAT 335
Query: 319 WTTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQL- 373
W ++I+G+ ++GK+ EA + + +M + T+L+S + ++ +
Sbjct: 336 WNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVI 395
Query: 374 ---STRDTICWNSMIAGFCQSGRMDEALDLF-RQMPK-KNSVSWNTMISGYAQAGQMDSA 428
+ RD S+I + + G A +F R PK K+ V WN MISGY + G+ +SA
Sbjct: 396 KAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESA 455
Query: 429 ENIFQAMEERNI 440
IF+ + E +
Sbjct: 456 IEIFELLREEKV 467
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%)
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P++ TF G LH ++K+G+ D+F + AL++MY K +V A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
+ + S N+ +SG NG+ +AF+ F + VT +L C
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 188/335 (56%)
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
YA +G + +A +F++++ R+++ WN++I+G++Q L + L M + PDQ TF
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC 538
+ G + H ++K +++ V +AL+ MY KC +VF +
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 539 VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
++I+W SLISGY +G E K F++M E P+ VTF+ +L+AC+H GL ++G +
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHK 658
F M D+ IEP +HY+ +VD LGR GRL+EA+ V K + +WGSLLGACR+H
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Query: 659 NLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
N+++ E AA + EL+P N NY+ +N +A G E ++R M + K PG S I
Sbjct: 393 NVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQI 452
Query: 719 EVQNQIQCFLSDDSGRLRPETIQIILNAISAHMRD 753
E+Q ++ F+ DD+ E I ++ +++ D
Sbjct: 453 ELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMD 487
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 139/290 (47%), Gaps = 20/290 (6%)
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL-FDVMPER---D 128
++ ++A +G + A LF + R+L+ WN MI+GY+ + +E + +D+ R D
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 129 NFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFN 185
+++A + + +LE + ++ K + +A++ Y K FSD +VF+
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 186 LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSS 241
+ ++++++ S+++GY +GK+ L FEKM E+ N V++ ++++ + G +
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 242 ARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAA- 294
+ F + P + M+ R G++ EA PCK + W +++ A
Sbjct: 329 GWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC 388
Query: 295 --YAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
+ ++ A F+++ +G ++ NGY G + A +V +M
Sbjct: 389 RIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKM 438
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 136/316 (43%), Gaps = 53/316 (16%)
Query: 143 GKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSM 198
G L ++ ++ +L+P WNA+I+GY +KG + ++ M V D ++ S+
Sbjct: 163 GILFRSLKIRDLIP-------WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASV 215
Query: 199 LAGYT-----QNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN 253
+ ++GK A+ ++ + N++ + +V + S ++F+++ N
Sbjct: 216 FRACSALDRLEHGKRAHAV-MIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRN 274
Query: 254 AVSWVTMLCGFARHGKITEARRLFDSMP---CK-NVVSWNAMIAAYAQDLQIDEAVKLFI 309
++W +++ G+ HGK++E + F+ M C+ N V++ ++ A +D+ + F
Sbjct: 275 VITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFY 334
Query: 310 KMPHKDGVS-----WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVD 364
M G+ + +++ R G+L EA E + PCK+ + L+ R+
Sbjct: 335 SMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKE---HPPVWGSLLGACRIH 391
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQ 424
K+ +T+ F ++ N ++ +GYA G
Sbjct: 392 GNVKLLELAATK------------------------FLELDPTNGGNYVVFANGYASCGL 427
Query: 425 MDSAENIFQAMEERNI 440
++A + + ME +
Sbjct: 428 REAASKVRRKMENAGV 443
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH---- 313
V +L +A G + A LF S+ ++++ WNAMI+ Y Q E + ++ M
Sbjct: 147 VKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV 206
Query: 314 KDGVSWTTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKM 369
D ++ ++ + +L+ + + M + +I ++AL+ + + ++
Sbjct: 207 PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRV 266
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQM 425
F+QLSTR+ I W S+I+G+ G++ E L F +M + N V++ +++ G +
Sbjct: 267 FDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLV 326
Query: 426 DSAENIFQAME 436
D F +M+
Sbjct: 327 DKGWEHFYSMK 337
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G ++H + G+ + ++ L+ +YA G +++A +F +++ DLI WN++ISGY
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQ 186
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS-----HAGLANQGLDLFKCMVEDFAI 608
G E + M +VPDQ TF + ACS G + + +C+ + +
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE--IGEFA 666
+ S LVD+ + + V + + N W SL+ H + + F
Sbjct: 247 D------SALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHGKVSEVLKCFE 299
Query: 667 AMRLSELEPHNASNYITLS 685
M+ P+ + + L+
Sbjct: 300 KMKEEGCRPNPVTFLVVLT 318
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 90/238 (37%), Gaps = 43/238 (18%)
Query: 360 TGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF------RQMP-------- 405
+G + A +F L RD I WN+MI+G+ Q G E L ++ R +P
Sbjct: 156 SGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASV 215
Query: 406 -------------------------KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
K N + + ++ Y + +F + RN+
Sbjct: 216 FRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNV 275
Query: 441 VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEY 500
++W SLI+G+ + + LK M EG +P+ TF G + H Y
Sbjct: 276 ITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFY 334
Query: 501 ILKSGYINDLFVSN--ALIAMYAKCGRVESAEQVFTAIECVDLIS-WNSLISGYALNG 555
+K Y + + A++ + GR++ A + C + W SL+ ++G
Sbjct: 335 SMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
GK AV + I N++ ++++ ++ K SD ++FD++S RN+++W ++I+GY
Sbjct: 228 GKRAHAVMI-KRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 110 HNSMVEEASKLFDVMPE---RDN-FSWALMITCYTRKGKLEKARELLELVPDKLDTAC-- 163
++ V E K F+ M E R N ++ +++T G ++K E K D
Sbjct: 287 YHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE--HFYSMKRDYGIEP 344
Query: 164 ----WNAVIAGYAKKGQFSDAEKVFNLMPVKDLVS-YNSMLAGYTQNGK---MGLALHFF 215
+ A++ + G+ +A + P K+ + S+L +G + LA F
Sbjct: 345 EGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKF 404
Query: 216 EKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
++ N ++ + +G+ + G +A ++ K+ N
Sbjct: 405 LELDPTNGGNYVVFANGYASCGLREAASKVRRKMEN 440
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNT 103
K + RVF +N++T+ S+IS + +GK+S+ + F+KM + N V++
Sbjct: 256 KCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLV 315
Query: 104 MIAGYLHNSMVEEASKLF-----DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
++ H +V++ + F D E + +A M+ R G+L++A E + P K
Sbjct: 316 VLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCK 375
Query: 159 LDTACWNAVIA 169
W +++
Sbjct: 376 EHPPVWGSLLG 386
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/513 (28%), Positives = 249/513 (48%), Gaps = 58/513 (11%)
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSW 319
+L + + + +A +LFD MP +N+V+WN +I Q D + + + + +
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR-DGDTNHRAHLGFCYLSRILF 135
Query: 320 TTI------INGYIRVGKLDEAREVYNQMPC--------KDIAAETALMSGLIQTGRVDE 365
T + G IR+ + Q+ C T+L+ + G + E
Sbjct: 136 TDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVE 195
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP------KKNSVSWNTMISG- 418
A ++F + RD + WN++++ + +G +DEA L + M + + ++++++S
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 419 ------------------------------YAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
YA++ + A F++M RN+VSWN++I
Sbjct: 256 RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIV 315
Query: 449 GFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN 508
GF QN +A++ M E +PD+ TF Q+ + K G +
Sbjct: 316 GFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSAD 375
Query: 509 DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQML 568
L V+N+LI+ Y++ G + A F +I DL+SW S+I A +G+A E+ + F+ ML
Sbjct: 376 FLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML 435
Query: 569 SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
+++ PD++TF+ +LSACSH GL +GL FK M E + IE EHY+CL+DLLGR G +
Sbjct: 436 -QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFI 494
Query: 629 EEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMH 688
+EA +V+ M + + + G C +H+ E ++ A +L E+EP NY LSN +
Sbjct: 495 DEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAY 554
Query: 689 AEAGRWEEVERLRVLMRDKR---AGKLPGCSWI 718
G W + LR R++R K PGCSW+
Sbjct: 555 VSEGHWNQAALLR--KRERRNCYNPKTPGCSWL 585
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 193/397 (48%), Gaps = 32/397 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDN- 129
S++ + K G I +AR++F+ + R+LV WN +++ Y+ N M++EA L +M N
Sbjct: 181 TSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNR 240
Query: 130 -----FSW-ALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKV 183
F++ +L+ C +GK + +L V + D A++ YAK SDA +
Sbjct: 241 FRGDYFTFSSLLSACRIEQGK--QIHAILFKVSYQFDIPVATALLNMYAKSNHLSDAREC 298
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA- 242
F M V+++VS+N+M+ G+ QNG+ A+ F +M +N+ L + ++S SA
Sbjct: 299 FESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAI 358
Query: 243 ---RQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
+Q+ + + ++ +++ ++R+G ++EA F S+ ++VSW ++I A
Sbjct: 359 WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGAL 418
Query: 296 AQDLQIDEAVKLFIKMPHK---DGVSWTTIINGYIRVGKLDEAREVYNQMP-CKDIAAE- 350
A +E++++F M K D +++ +++ G + E + +M I AE
Sbjct: 419 ASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAED 478
Query: 351 ---TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL-----DLFR 402
T L+ L + G +DEAS + N + T + + G C E++ L
Sbjct: 479 EHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLE 538
Query: 403 QMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERN 439
P K V+++ + + Y G + A + + E RN
Sbjct: 539 IEPTK-PVNYSILSNAYVSEGHWNQAA-LLRKRERRN 573
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 199/409 (48%), Gaps = 39/409 (9%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL----------HNS 112
I+ +L N ++ + K + DA +LFD+M RN+V+WN +I G + H
Sbjct: 67 IYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLG 126
Query: 113 MVEEASKLF-DVMPERDNFSWALMITCYTRKGKLEKARELLEL-VPDKLDTACW--NAVI 168
+ LF DV D+ S+ +I T ++ +L L V L+++C+ +++
Sbjct: 127 FCYLSRILFTDV--SLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLV 184
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKNVVSWN 227
Y K G +A +VF + +DLV +N++++ Y NG + A + M ++KN +
Sbjct: 185 HFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGD 244
Query: 228 LMV-SGFVNSGDLSSARQ----LFE---KIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
S +++ + +Q LF+ + P A + + M +A+ +++AR F+S
Sbjct: 245 YFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNM---YAKSNHLSDARECFES 301
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGKLDEA 335
M +NVVSWNAMI +AQ+ + EA++LF +M D +++ ++++ + + E
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEI 361
Query: 336 REVYNQMPCKD----IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
++V + K ++ +L+S + G + EA F+ + D + W S+I
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASH 421
Query: 392 GRMDEALDLFRQMPKK---NSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
G +E+L +F M +K + +++ ++S + G + F+ M E
Sbjct: 422 GFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 64/315 (20%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
GK A+ +F + ++ ++++++AK+ +SDAR+ F+ M RN+VSWN MI G+
Sbjct: 260 GKQIHAI-LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFA 318
Query: 110 HNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLE-LVPDKLDTACWNAVI 168
N EA +LF M LLE L PD+L A +V+
Sbjct: 319 QNGEGREAMRLFGQM--------------------------LLENLQPDELTFA---SVL 349
Query: 169 AGYAKKGQFSDAEKVFNLMPVK---DLVSY-NSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
+ AK + ++V ++ K D +S NS+++ Y++NG + AL F + E ++V
Sbjct: 350 SSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLV 409
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKI---PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
SW ++ + G + Q+FE + P+ ++++ +L + G + E R F M
Sbjct: 410 SWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRM- 468
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQ 341
F K+ +D +T +I+ R G +DEA +V N
Sbjct: 469 ------------------------TEFYKIEAEDE-HYTCLIDLLGRAGFIDEASDVLNS 503
Query: 342 MPCKDIAAETALMSG 356
MP + A +G
Sbjct: 504 MPTEPSTHALAAFTG 518
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA--- 552
Q H +++K G N LF+ N L+ Y K + A+++F + ++++WN LI G
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 553 --LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEP 610
N A F ++L +V D V+F+G++ C+ + G+ L C++ +E
Sbjct: 117 GDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQL-HCLMVKQGLES 175
Query: 611 LAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+ LV G+ G + EA V + + + LW +L+ +
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSS 217
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 245/486 (50%), Gaps = 28/486 (5%)
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMP--HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKD 346
NA+ YA ++ A KLF ++P KD V WTT+++ + R G L + +++ +M K
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 347 IAAETALMS------------GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
+ + + G Q G A KM S + +C N+++ + + G +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGH-GVAVKMGVLTSVK--VC-NALMDMYGKCGLV 162
Query: 395 DEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
E +F ++ +K+ VSW ++ + ++ +F M ERN V+W ++ G+L
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 455 LYFDALKSLV-LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI------ 507
+ L+ L ++ R G + T VG +H Y LK +
Sbjct: 223 FTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEAS 282
Query: 508 -NDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
+D+ V AL+ MYAKCG ++S+ VF + ++++WN+L SG A++G F Q
Sbjct: 283 YDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQ 342
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
M+ EV PD +TF +LSACSH+G+ ++G F + + +EP +HY+C+VDLLGR G
Sbjct: 343 MI-REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAG 400
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSN 686
+EEA ++R M V N + GSLLG+C VH +EI E L ++ P N I +SN
Sbjct: 401 LIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSN 460
Query: 687 MHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNA 746
M+ GR + + LR +R + K+PG S I V + + F S D R + I + LN
Sbjct: 461 MYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNE 520
Query: 747 ISAHMR 752
+ +R
Sbjct: 521 VIERIR 526
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 166/367 (45%), Gaps = 50/367 (13%)
Query: 92 KMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP--ERDNFSWALMITCYTRKGKL---- 145
K + R+ +S N + Y + + A KLFD +P E+DN W +++ ++R G L
Sbjct: 38 KKAPRSYLS-NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSM 96
Query: 146 ----EKARELLELVPDKLDTACWNAVIA-----GYAKKGQFSDAEKVFNLMPVKDLVSYN 196
E R+ +E+ D + C V A G+A++G A K+ L VK N
Sbjct: 97 KLFVEMRRKRVEI--DDVSVVCLFGVCAKLEDLGFAQQGH-GVAVKMGVLTSVK---VCN 150
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS 256
+++ Y + G + FE++ EK+VVSW +++ V L R++F ++P NAV+
Sbjct: 151 ALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVA 210
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
W M+ G+ G E L M + N V+ +M++A AQ
Sbjct: 211 WTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ-------------- 256
Query: 312 PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN 371
S ++ ++ V L + + + D+ TAL+ + G +D + +F
Sbjct: 257 ------SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM---PKKNSVSWNTMISGYAQAGQMDSA 428
+ R+ + WN++ +G G+ +D+F QM K + +++ ++S + +G +D
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEG 370
Query: 429 ENIFQAM 435
F ++
Sbjct: 371 WRCFHSL 377
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 174/405 (42%), Gaps = 74/405 (18%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
N+++ ++ K G +S+ +++F+++ ++++VSW ++ + +E ++F MPER+
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK 190
+W +M+ Y G RE+LEL+ AE VF
Sbjct: 210 AWTVMVAGYLGAG---FTREVLELL------------------------AEMVFRCGHGL 242
Query: 191 DLVSYNSMLAGYTQNGKM--GLALHFF---------EKMAEKNVVSWNLMVSGFVNSGDL 239
+ V+ SML+ Q+G + G +H + E+ + +V+ +V + G++
Sbjct: 243 NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI 302
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
S+ +F + N V+W + G A HGK R + D P
Sbjct: 303 DSSMNVFRLMRKRNVVTWNALFSGLAMHGK---GRMVIDMFP------------------ 341
Query: 300 QIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET---ALMSG 356
Q+ VK D +++T +++ G +DE ++ + + + A M
Sbjct: 342 QMIREVK-------PDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVD 394
Query: 357 LI-QTGRVDEASKMFNQLST-RDTICWNSMIAGFCQSGRMDEALDLFR---QMPKKNSVS 411
L+ + G ++EA + ++ + + S++ G+++ A + R QM N+
Sbjct: 395 LLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEY 454
Query: 412 WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLY 456
M + Y G+ D A+ + ++ +R I L + ++ +S++
Sbjct: 455 QILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVH 499
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 26/315 (8%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
GK G V E R+F K++V++ ++ K + R++F +M +RN V+W M+A
Sbjct: 157 GKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVA 216
Query: 107 GYLHNSMVEEASKLFDVMPERD----NF-SWALMITCYTRKGKLEKAR--ELLELVPDKL 159
GYL E +L M R NF + M++ + G L R + L + +
Sbjct: 217 GYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMM 276
Query: 160 --DTACWNAVIAG------YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLA 211
+ A ++ V+ G YAK G + VF LM +++V++N++ +G +GK +
Sbjct: 277 MGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMV 336
Query: 212 LHFFEKM---AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGF 264
+ F +M + + +++ ++S +SG + + F + P + M+
Sbjct: 337 IDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLL 396
Query: 265 ARHGKITEARRLFDSMPC-KNVVSWNAMIAAYAQDLQIDEAVKL---FIKMPHKDGVSWT 320
R G I EA L MP N V +++ + + +++ A ++ I+M +
Sbjct: 397 GRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQI 456
Query: 321 TIINGYIRVGKLDEA 335
+ N Y+ G+ D A
Sbjct: 457 LMSNMYVAEGRSDIA 471
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 494 GNQLHEYILKSGY--INDLFVSNALIAMYAKCGRVESAEQVFTAIECV--DLISWNSLIS 549
G +LH + SG ++SNAL YA G + +A+++F I D + W +L+S
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH---AGLANQGLDLFKCMVEDF 606
++ G + + K F +M + V D V+ + + C+ G A QG + M
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKM---- 140
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFA 666
+ + + L+D+ G+ G + E + ++ K+ W +L + LE G
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVS-WTVVLDTVVKWEGLERGREV 199
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
E+ NA + + + AG EV L
Sbjct: 200 ---FHEMPERNAVAWTVMVAGYLGAGFTREVLEL 230
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 244/505 (48%), Gaps = 65/505 (12%)
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIIN------- 324
E RR+FD K+ +SW +M++ Y + +A+++F++M VS+ N
Sbjct: 115 ETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM-----VSFGLDANEFTLSSA 169
Query: 325 -------GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRD 377
G +R+G+ + + + T + VD A ++F+++ D
Sbjct: 170 VKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD-ARRVFDEMPEPD 228
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPK------------------------------- 406
ICW ++++ F ++ +EAL LF M +
Sbjct: 229 VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIH 288
Query: 407 ---------KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
N V ++++ Y + G + A +F M ++N VSW++L+ G+ QN +
Sbjct: 289 GKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHE 348
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
A++ RE ++ D F ++G ++H ++ G ++ V +ALI
Sbjct: 349 KAIEIF----REMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALI 404
Query: 518 AMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
+Y K G ++SA +V++ + ++I+WN+++S A NG EA F M+ + + PD +
Sbjct: 405 DLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYI 464
Query: 578 TFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRG 637
+FI +L+AC H G+ ++G + F M + + I+P EHYSC++DLLGR G EEA N++
Sbjct: 465 SFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLER 524
Query: 638 MDVKANAGLWGSLLGACRVHKNL-EIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
+ + +A LWG LLG C + + + E A R+ ELEP +Y+ LSNM+ GR +
Sbjct: 525 AECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGD 584
Query: 697 VERLRVLMRDKRAGKLPGCSWIEVQ 721
+R LM + K G SWI+
Sbjct: 585 ALNIRKLMVRRGVAKTVGQSWIDAH 609
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 221/467 (47%), Gaps = 74/467 (15%)
Query: 38 NKNQQIIHLGKLGKVEEAVRVFSNT------------------------------IHKNL 67
K +I+ L KLG++ EA+R+ ++T H ++
Sbjct: 28 TKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHV 87
Query: 68 VTY---------NSMISVFAKNGK-ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V NS++S++ K G + + R++FD ++ +SW +M++GY+ +E
Sbjct: 88 VKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTG---KEH 144
Query: 118 SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC-------WNAVIAG 170
K +V E S+ L +T ++ EL E+ + WN I+
Sbjct: 145 VKALEVFVEM--VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISS 202
Query: 171 -----YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-KNVV 224
Y + DA +VF+ MP D++ + ++L+ +++N AL F M K +V
Sbjct: 203 TLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLV 262
Query: 225 ----SWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRL 276
++ +++ N L +++ K+ N V ++L + + G + EAR++
Sbjct: 263 PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQV 322
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAR 336
F+ M KN VSW+A++ Y Q+ + ++A+++F +M KD + T++ + + +
Sbjct: 323 FNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGK 382
Query: 337 EVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG 392
E++ Q + ++ E+AL+ ++G +D AS++++++S R+ I WN+M++ Q+G
Sbjct: 383 EIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNG 442
Query: 393 RMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM 435
R +EA+ F M KK + +S+ +++ G +D N F M
Sbjct: 443 RGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 201/435 (46%), Gaps = 32/435 (7%)
Query: 37 FNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMIS-----VFAKNGKISDARQLFD 91
F + + +LG+V R F + + +N IS ++ N + DAR++FD
Sbjct: 164 FTLSSAVKACSELGEVRLG-RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFD 222
Query: 92 KMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE-----RDNFSWALMITCYTRKGKLE 146
+M + +++ W +++ + N + EEA LF M D ++ ++T +L+
Sbjct: 223 EMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Query: 147 KARELL-ELVPDKL--DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
+ +E+ +L+ + + + ++++ Y K G +A +VFN M K+ VS++++L GY
Sbjct: 283 QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYC 342
Query: 204 QNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVT 259
QNG+ A+ F +M EK++ + ++ + +++ + N +
Sbjct: 343 QNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESA 402
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----D 315
++ + + G I A R++ M +N+++WNAM++A AQ+ + +EAV F M K D
Sbjct: 403 LIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPD 462
Query: 316 GVSWTTIINGYIRVGKLDEAREVYNQMP-CKDIAAETALMSGLI----QTGRVDEASKMF 370
+S+ I+ G +DE R + M I T S +I + G +EA +
Sbjct: 463 YISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLL 522
Query: 371 NQLSTRDTICWNSMIAGFC----QSGRMDEAL-DLFRQMPKKNSVSWNTMISGYAQAGQM 425
+ R+ ++ G C + R+ E + ++ K +S+ + + Y G+
Sbjct: 523 ERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRH 582
Query: 426 DSAENIFQAMEERNI 440
A NI + M R +
Sbjct: 583 GDALNIRKLMVRRGV 597
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 154/312 (49%), Gaps = 23/312 (7%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
++ +N I N+V +S++ ++ K G + +ARQ+F+ MS++N VSW+ ++ GY N E+
Sbjct: 290 KLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEK 349
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW------NAVIAG 170
A ++F M E+D + + ++ L R E+ + C+ +A+I
Sbjct: 350 AIEIFREMEEKDLYCFGTVLKACA---GLAAVRLGKEIHGQYVRRGCFGNVIVESALIDL 406
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSW 226
Y K G A +V++ M +++++++N+ML+ QNG+ A+ FF M +K + +S+
Sbjct: 407 YGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISF 466
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+++ ++G + R F + P + M+ R G EA L +
Sbjct: 467 IAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAE 526
Query: 282 CKNVVS-WNAMI---AAYAQDLQIDEAV-KLFIKMPHKDGVSWTTIINGYIRVGKLDEAR 336
C+N S W ++ AA A ++ E + K +++ K +S+ + N Y +G+ +A
Sbjct: 527 CRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDAL 586
Query: 337 EVYNQMPCKDIA 348
+ M + +A
Sbjct: 587 NIRKLMVRRGVA 598
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 229 bits (585), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 227/438 (51%), Gaps = 24/438 (5%)
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQ 341
C ++S +++YA ++A+ LF++M H S+ ++ ++
Sbjct: 9 CTKLISLTKQLSSYANQGNHEQALNLFLQM-HS---SFALPLDAHVF------------S 52
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
+ K AA + G G V S N LS C + G C S + A LF
Sbjct: 53 LALKSCAAAFRPVLG----GSVHAHSVKSNFLSNPFVGCALLDMYGKCLS--VSHARKLF 106
Query: 402 RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSLITGFL-QNSLYFDA 459
++P++N+V WN MIS Y G++ A +++AM+ N S+N++I G + + A
Sbjct: 107 DEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRA 166
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
++ M KP+ T ++ ++H Y ++ + + L+
Sbjct: 167 IEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEA 226
Query: 520 YAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
Y +CG + + VF ++E D+++W+SLIS YAL+G A A K F++M +V PD + F
Sbjct: 227 YGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
Query: 580 IGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+ +L ACSHAGLA++ L FK M D+ + +HYSCLVD+L R+GR EEA+ V++ M
Sbjct: 287 LNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
K A WG+LLGACR + +E+ E AA L +EP N +NY+ L ++ GR EE ER
Sbjct: 347 EKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAER 406
Query: 700 LRVLMRDKRAGKLPGCSW 717
LR+ M++ PG SW
Sbjct: 407 LRLKMKESGVKVSPGSSW 424
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 161/347 (46%), Gaps = 39/347 (11%)
Query: 58 VFSNTIHKNLVTYN---------SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY 108
V ++H + V N +++ ++ K +S AR+LFD++ QRN V WN MI+ Y
Sbjct: 65 VLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHY 124
Query: 109 LHNSMVEEASKLF---DVMPERDNFSWALMITCYTRKGK---LEKARELLELVPDKLDTA 162
H V+EA +L+ DVMP +F+ + T G +E R+++E K +
Sbjct: 125 THCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEF-RFKPNLI 183
Query: 163 CWNAVIAGYAKKGQFSDAEKVF-----NLM-PVKDLVSYNSMLAGYTQNGKMGLALHFFE 216
A+++ + G F +++ NL+ P L S ++ Y + G + F+
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKS--GLVEAYGRCGSIVYVQLVFD 241
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITE 272
M +++VV+W+ ++S + GD SA + F+++ P+ ++++ +L + G E
Sbjct: 242 SMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADE 301
Query: 273 ARRLFDSMPCKNVV-----SWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV-SWTTIINGY 326
A F M + ++ ++ ++ + +EA K+ MP K +W ++
Sbjct: 302 ALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGAC 361
Query: 327 IRVGKLD----EAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKM 369
G+++ ARE+ P ++ A L + GR +EA ++
Sbjct: 362 RNYGEIELAEIAARELLMVEP-ENPANYVLLGKIYMSVGRQEEAERL 407
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 141/318 (44%), Gaps = 22/318 (6%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS-QRNLVSWNTMI 105
GK V A ++F +N V +N+MIS + GK+ +A +L++ M N S+N +I
Sbjct: 94 GKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAII 153
Query: 106 AGYLHNS-----MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL- 159
G + +E K+ + + + + +++ + G +E+ L
Sbjct: 154 KGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLI 213
Query: 160 --DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
+ ++ Y + G + VF+ M +D+V+++S+++ Y +G AL F++
Sbjct: 214 EPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQE 273
Query: 218 MAEKNVVSWNL----MVSGFVNSGDLSSARQLFEKIPNPNAV-----SWVTMLCGFARHG 268
M V ++ ++ ++G A F+++ + + ++ +R G
Sbjct: 274 MELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVG 333
Query: 269 KITEARRLFDSMPCKNVV-SWNAMIAA---YAQDLQIDEAVKLFIKMPHKDGVSWTTIIN 324
+ EA ++ +MP K +W A++ A Y + + A + + + ++ ++ +
Sbjct: 334 RFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGK 393
Query: 325 GYIRVGKLDEAREVYNQM 342
Y+ VG+ +EA + +M
Sbjct: 394 IYMSVGRQEEAERLRLKM 411
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 179/304 (58%), Gaps = 2/304 (0%)
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
I+ Y +AG+ ++A +F ER + SWN++I G +A++ V M R G +PD
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYIL--KSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
T + QLH+ +L K+ +D+ + N+LI MY KCGR++ A +F
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
+ +++SW+S+I GYA NG +EA + F+QM V P+++TF+G+LSAC H GL
Sbjct: 279 EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVE 338
Query: 594 QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA 653
+G F M +F +EP HY C+VDLL R G+L+EA VV M +K N +WG L+G
Sbjct: 339 EGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Query: 654 CRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
C ++E+ E+ A + ELEP N Y+ L+N++A G W++VER+R LM+ K+ K+P
Sbjct: 399 CEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIP 458
Query: 714 GCSW 717
S+
Sbjct: 459 AYSY 462
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 25/328 (7%)
Query: 44 IHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
IH LGK +V V + + I+++ K G+ +AR++FD+ +R L SWN
Sbjct: 130 IHDFTLGKELHSVAVRLGFVGDEFCE-SGFITLYCKAGEFENARKVFDENPERKLGSWNA 188
Query: 104 MIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELV---- 155
+I G H EA ++F M E D+F+ + G L A +L + V
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAK 248
Query: 156 -PDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
+K D N++I Y K G+ A +F M +++VS++SM+ GY NG AL
Sbjct: 249 TEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALEC 308
Query: 215 FEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFA 265
F +M E N +++ ++S V+ G + + F + + P + ++ +
Sbjct: 309 FRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLS 368
Query: 266 RHGKITEARRLFDSMPCK-NVVSWNAMIAAYAQ--DLQIDEAVKLFIK--MPHKDGVSWT 320
R G++ EA+++ + MP K NV+ W ++ + D+++ E V ++ P DGV +
Sbjct: 369 RDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGV-YV 427
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIA 348
+ N Y G + V M K +A
Sbjct: 428 VLANVYALRGMWKDVERVRKLMKTKKVA 455
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 5/268 (1%)
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
WN+++ ++++ DA++ + M R PD+ + +G +LH +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
+ G++ D F + I +Y K G E+A +VF L SWN++I G G A EA +
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL-AEHYSCLVDL 621
F M + PD T + + ++C G + L KC+++ E + L+D+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 622 LGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKN-LEIGE-FAAMRLSELEPHNAS 679
G+ GR++ A ++ M + N W S++ + N LE E F MR + P N
Sbjct: 265 YGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP-NKI 322
Query: 680 NYITLSNMHAEAGRWEEVERLRVLMRDK 707
++ + + G EE + +M+ +
Sbjct: 323 TFVGVLSACVHGGLVEEGKTYFAMMKSE 350
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 29/264 (10%)
Query: 237 GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMI 292
GD+ +R L + P A W ++ + RH +A +++ M V+ S +I
Sbjct: 68 GDIFRSRILDQY---PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 293 AAYAQ--DLQIDE-----AVKL-FIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
A Q D + + AV+L F+ D + I Y + G+ + AR+V+++ P
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLGFVG----DEFCESGFITLYCKAGEFENARKVFDENPE 180
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDL 400
+ + + A++ GL GR +EA +MF + D S+ A G + A L
Sbjct: 181 RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQL 240
Query: 401 FRQM------PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNS 454
+ + K + + N++I Y + G+MD A +IF+ M +RN+VSW+S+I G+ N
Sbjct: 241 HKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANG 300
Query: 455 LYFDALKSLVLMGREGKKPDQSTF 478
+AL+ M G +P++ TF
Sbjct: 301 NTLEALECFRQMREFGVRPNKITF 324
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ---- 95
N I GK G+++ A +F +N+V+++SMI +A NG +A + F +M +
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 96 RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARE 150
N +++ +++ +H +VEE F +M + ++ +R G+L++A++
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 151 LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM 187
++E +P K + W ++ G K G AE V M
Sbjct: 379 VVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYM 415
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 229 bits (584), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 231/477 (48%), Gaps = 12/477 (2%)
Query: 286 VSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK 345
VS +A + +D A K K+ W +I G+ +++ VY QM
Sbjct: 43 VSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF 102
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTR--------DTICWNSMIAGFCQSGRMDEA 397
+ + L+++ K+ L D N++I + A
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 398 LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
LF +MP KN V+WN+++ YA++G + SA +F M ER++V+W+S+I G+++ Y
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 222
Query: 458 DALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL 516
AL+ M R G K ++ T G +H YIL + + +L
Sbjct: 223 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSL 282
Query: 517 IAMYAKCGRVESAEQVF--TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
I MYAKCG + A VF +++ D + WN++I G A +G+ E+ + F +M ++ P
Sbjct: 283 IDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDP 342
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
D++TF+ +L+ACSH GL + FK + E A EP +EHY+C+VD+L R G +++A +
Sbjct: 343 DEITFLCLLAACSHGGLVKEAWHFFKSLKESGA-EPKSEHYACMVDVLSRAGLVKDAHDF 401
Query: 635 VRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
+ M +K + G+LL C H NLE+ E +L EL+PHN Y+ L+N++A ++
Sbjct: 402 ISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQF 461
Query: 695 EEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAISAHM 751
+R M K K+ G S +++ F++ D + I +L A M
Sbjct: 462 RAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQLTGAWM 518
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 195/426 (45%), Gaps = 31/426 (7%)
Query: 41 QQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS 100
Q + +L K+ + + + V+ S + +G + A + K+S
Sbjct: 16 HQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYG 75
Query: 101 WNTMIAGYLHNSMVEEASKL------FDVMPERDNFSWALMITCYTRKGKLEKAREL-LE 153
WN +I G+ ++ E++ + F ++P D+ ++ ++ +R + L
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLP--DHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 154 LVPDKL--DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLA 211
+V L D N +I Y + A K+F+ MP K+LV++NS+L Y ++G + A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 212 LHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAVSWVTMLCGFAR 266
F++M+E++VV+W+ M+ G+V G+ + A ++F+++ N V+ V+++C A
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 267 HGKI----TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK--DGVSWT 320
G + T R + D V+ ++I YA+ I +A +F + K D + W
Sbjct: 254 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 321 TIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQL--- 373
II G G + E+ +++++M I + L++ G V EA F L
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES 373
Query: 374 -STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAGQMDSAENI 431
+ + + M+ ++G + +A D +MP K + S +++G G ++ AE +
Sbjct: 374 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
Query: 432 FQAMEE 437
+ + E
Sbjct: 434 GKKLIE 439
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 156/342 (45%), Gaps = 36/342 (10%)
Query: 43 IIHL-GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
+IH+ G A ++F HKNLVT+NS++ +AK+G + AR +FD+MS+R++V+W
Sbjct: 149 LIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTW 208
Query: 102 NTMIAGYLHNSMVEEASKLFDVM-----PERDNFSWALMITCYTRKGKLEKARELLELVP 156
++MI GY+ +A ++FD M + + + +I G L + + + +
Sbjct: 209 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 268
Query: 157 D---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK--DLVSYNSMLAGYTQNGKMGLA 211
D L ++I YAK G DA VF VK D + +N+++ G +G + +
Sbjct: 269 DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRES 328
Query: 212 LHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCG 263
L F KM E + +++ +++ + G + A F+ + P + + M+
Sbjct: 329 LQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDV 388
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ------DLQIDEAV--KLFIKMPHKD 315
+R G + +A MP K +M+ A +L++ E V KL PH D
Sbjct: 389 LSRAGLVKDAHDFISEMPIKPT---GSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 316 ----GVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
G++ IN R + RE + K IA + L
Sbjct: 446 GRYVGLANVYAINKQFRAAR--SMREAMEKKGVKKIAGHSIL 485
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 259/521 (49%), Gaps = 55/521 (10%)
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM---- 311
S ++M F+R + R++FD M ++ VS+ ++I + QD + EA+KL +M
Sbjct: 87 SLISMYAKFSRKYAV---RKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYG 143
Query: 312 --PHKDGVS----WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDE 365
P + V+ T + +V ++ A + ++ + + TAL+ ++
Sbjct: 144 FIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAA 203
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN--------------SVS 411
A +F+Q+ ++ + W +MI+G + + +DLFR M ++N V
Sbjct: 204 AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE 263
Query: 412 WN--------------------------TMISGYAQAGQMDSAENIFQAMEERNIVSWNS 445
N ++ Y + G + + +F+ + R++V W+S
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSS 323
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
+I+G+ + + + L M +EG + + T + +H ILK G
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCG 383
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
+++ + + NALI MYAKCG + +A +VF + DL+SW+S+I+ Y L+G+ EA + FK
Sbjct: 384 FMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFK 443
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRM 625
M+ D + F+ +LSAC+HAGL + +F + + EHY+C ++LLGR
Sbjct: 444 GMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGKYHMPVTLEHYACYINLLGRF 502
Query: 626 GRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEI-GEFAAMRLSELEPHNASNYITL 684
G++++AF V M +K +A +W SLL AC H L++ G+ A L + EP N +NY+ L
Sbjct: 503 GKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLL 562
Query: 685 SNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQ 725
S +H E+G + E +R +M+ ++ K G S IE + QI+
Sbjct: 563 SKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIE 603
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 192/402 (47%), Gaps = 40/402 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM- 124
+ V NS+IS++AK + R++FD+M R+ VS+ ++I + ++ EA KL M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 125 ----PERDNFSWALMITCYTRKGKLEKAREL---LELVPDKLDTACW--NAVIAGYAKKG 175
+ +L+ C TR G K + L LV +++ + A++ Y K
Sbjct: 141 FYGFIPKSELVASLLALC-TRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNL-MVSGFV 234
+ A VF+ M VK+ VS+ +M++G N + + F M +N+ + ++S
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLP 259
Query: 235 NSGDLSSARQLFEKIPNPN-----------AVSWVTMLCGFARHGKITEARRLFDSMPCK 283
+L+ L ++I + +++TM C R G ++ +R LF++ +
Sbjct: 260 ACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC---RCGNVSLSRVLFETSKVR 316
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDG-----VSWTTIINGYIRVGKLDEAREV 338
+VV W++MI+ YA+ E + L +M K+G V+ I++ L A V
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQM-RKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 339 YNQ-MPC---KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
++Q + C I AL+ + G + A ++F +L+ +D + W+SMI + G
Sbjct: 376 HSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHG 435
Query: 395 DEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIF 432
EAL++F+ M K + +++ ++S AG ++ A+ IF
Sbjct: 436 SEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF 477
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 168/392 (42%), Gaps = 61/392 (15%)
Query: 282 CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQ 341
C VVS N++I+ YA+ + K+F +M H+D VS+ +IIN + G L EA ++ +
Sbjct: 80 CDTVVS-NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKE 138
Query: 342 MPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
M ++ L++ L+ + G + ++MF+ L D RM E+
Sbjct: 139 MYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDE--------------RMQES 184
Query: 398 LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
+ L ++ Y + +A ++F ME +N VSW ++I+G + N Y
Sbjct: 185 VLL-----------STALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYE 233
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX-XQVGNQLHEYILKSGYINDLFVSNAL 516
+ M RE +P++ T + ++H + + G D ++ A
Sbjct: 234 MGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAF 293
Query: 517 IAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
+ MY +CG V + +F + D++ W+S+ISGYA G E QM E + +
Sbjct: 294 MTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANS 353
Query: 577 VTFIGMLSAC----------------------SHAGLANQGLDLF-KCMVEDFAIEPLAE 613
VT + ++SAC SH L N +D++ KC A E E
Sbjct: 354 VTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE 413
Query: 614 -------HYSCLVDLLGRMGRLEEAFNVVRGM 638
+S +++ G G EA + +GM
Sbjct: 414 LTEKDLVSWSSMINAYGLHGHGSEALEIFKGM 445
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 202/425 (47%), Gaps = 35/425 (8%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K+ ++ A+ + + ++++ +++ ++ K + A +FD+M +N VSW MI+G
Sbjct: 166 KVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISG 225
Query: 108 YLHNSMVEEASKLFDVMPERDNF--SWALMITCYTRKGKLEKARELLELVPD-------K 158
+ N E LF M +R+N + +++ +L L++ +
Sbjct: 226 CVANQNYEMGVDLFRAM-QRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCH 284
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
D A + Y + G S + +F V+D+V ++SM++GY + G ++ +M
Sbjct: 285 ADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQM 344
Query: 219 ----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKI 270
E N V+ +VS NS LS A + +I +S + ++ +A+ G +
Sbjct: 345 RKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSL 404
Query: 271 TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF---IKMPHK-DGVSWTTIINGY 326
+ AR +F + K++VSW++MI AY EA+++F IK H+ D +++ I++
Sbjct: 405 SAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSAC 464
Query: 327 IRVGKLDEAREVYNQ-----MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTI-C 380
G ++EA+ ++ Q MP + ++ L + G++D+A ++ + + +
Sbjct: 465 NHAGLVEEAQTIFTQAGKYHMPVT-LEHYACYINLLGRFGKIDDAFEVTINMPMKPSARI 523
Query: 381 WNSMIAGFCQSGRMDEAL-----DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
W+S+++ GR+D A +L + P N ++ + + ++G +AE + + M
Sbjct: 524 WSSLLSACETHGRLDVAGKIIANELMKSEP-DNPANYVLLSKIHTESGNYHAAEEVRRVM 582
Query: 436 EERNI 440
+ R +
Sbjct: 583 QRRKL 587
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 159/380 (41%), Gaps = 64/380 (16%)
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
DT N++I+ YAK + KVF+ M +D VSY S++ Q+G + A+ ++M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 220 EKNVVSWNLMVSGFV----NSGDLSSARQLFEKIPNPN---------AVSWVTMLCGFAR 266
+ + +V+ + G S ++F + + + + V M F
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTI 322
H A +FD M KN VSW AMI+ + + V LF M + + V+ ++
Sbjct: 201 HAA---AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSV 257
Query: 323 INGYIRVGKLDE-AREVYN---QMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTRD 377
+ + + +E++ + C D A M+ + G V + +F RD
Sbjct: 258 LPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRD 317
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSW--------------------- 412
+ W+SMI+G+ ++G E ++L QM K+ NSV+
Sbjct: 318 VVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHS 377
Query: 413 --------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFD 458
N +I YA+ G + +A +F + E+++VSW+S+I + + +
Sbjct: 378 QILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSE 437
Query: 459 ALKSLVLMGREGKKPDQSTF 478
AL+ M + G + D F
Sbjct: 438 ALEIFKGMIKGGHEVDDMAF 457
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
+G QLH LK+G D VSN+LI+MYAK R + +VF + D +S+ S+I+
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV-EDFAIEPL 611
+G EA K K+M +P +L+ C+ G +++ +F +V D ++
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGE--FAAMR 669
+ LVD+ + AF+V M+VK N W +++ C ++N E+G F AM+
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQNYEMGVDLFRAMQ 243
Query: 670 LSELEPHNASNYITL 684
L P N +TL
Sbjct: 244 RENLRP----NRVTL 254
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 229 bits (583), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 236/447 (52%), Gaps = 28/447 (6%)
Query: 307 LFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEA 366
LF+ +P D + ++I ++ Y +M +++ + +I++
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKS------ 116
Query: 367 SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMD 426
+ L + +++++GF LD + Q +++ Y++ G M+
Sbjct: 117 CADLSALRIGKGVHCHAVVSGF--------GLDTYVQA---------ALVTFYSKCGDME 159
Query: 427 SAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXX 486
A +F M E++IV+WNSL++GF QN L +A++ M G +PD +TF
Sbjct: 160 GARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACA 219
Query: 487 XXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNS 546
+G+ +H+YI+ G ++ + ALI +Y++CG V A +VF ++ ++ +W +
Sbjct: 220 QTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTA 279
Query: 547 LISGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+IS Y +GY +A + F +M + +P+ VTF+ +LSAC+HAGL +G ++K M +
Sbjct: 280 MISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Query: 606 FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANA---GLWGSLLGACRVHKNLEI 662
+ + P EH+ C+VD+LGR G L+EA+ + +D A LW ++LGAC++H+N ++
Sbjct: 340 YRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDL 399
Query: 663 GEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQN 722
G A RL LEP N +++ LSN++A +G+ +EV +R M K G S IEV+N
Sbjct: 400 GVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVEN 459
Query: 723 QIQCF-LSDDSGRLRPETIQIILNAIS 748
+ F + D+S + E + + IS
Sbjct: 460 KTYMFSMGDESHQETGEIYRYLETLIS 486
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 147/311 (47%), Gaps = 33/311 (10%)
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
LDT A++ Y+K G A +VF+ MP K +V++NS+++G+ QNG A+ F +M
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 219 AEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKI 270
E + ++ ++S +G +S + + I + N ++ ++R G +
Sbjct: 200 RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDV 259
Query: 271 TEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM-----PHKDGVSWTTIING 325
+AR +FD M NV +W AMI+AY +AV+LF KM P + V++ +++
Sbjct: 260 GKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 326 YIRVGKLDEAREVYNQMP-----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
G ++E R VY +M + ++ L + G +DEA K +QL
Sbjct: 320 CAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKAT 379
Query: 381 ----WNSMIAGFCQSGRMDEALDLFRQMPKK------NSVSWNTMISG-YAQAGQMDSAE 429
W +M+ G C +M DL ++ K+ ++ + M+S YA +G+ D
Sbjct: 380 APALWTAML-GAC---KMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVS 435
Query: 430 NIFQAMEERNI 440
+I M N+
Sbjct: 436 HIRDGMMRNNL 446
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 140/296 (47%), Gaps = 26/296 (8%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER---- 127
++++ ++K G + ARQ+FD+M ++++V+WN++++G+ N + +EA ++F M E
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVF 184
D+ ++ +++ + G + + + + + L+ A+I Y++ G A +VF
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE-----KNVVSWNLMVSGFVNSGDL 239
+ M ++ ++ +M++ Y +G A+ F KM + N V++ ++S ++G +
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 240 SSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS----WNA 290
R +++++ P V M+ R G + EA + + + W A
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 291 MIAAYAQ----DLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
M+ A DL ++ A +L P G + N Y GK DE + + M
Sbjct: 387 MLGACKMHRNYDLGVEIAKRLIALEPDNPG-HHVMLSNIYALSGKTDEVSHIRDGM 441
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
+ S + N+ ++I+++++ G + AR++FDKM + N+ +W MI+ Y + ++A
Sbjct: 234 IISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQA 293
Query: 118 SKLFDVM-----PERDNFSWALMITCYTRKGKLEKAREL 151
+LF+ M P +N ++ +++ G +E+ R +
Sbjct: 294 VELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSV 332
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 254/535 (47%), Gaps = 72/535 (13%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM-----PHKDGVS 318
+A+ G I AR++FD+MP +NVVSW A+I Y Q E LF M P++ +S
Sbjct: 106 YAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLS 165
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL-MSGLIQTGRVD-EASKMFNQLSTR 376
+ + + GK + + C A + M G G EA +F + +
Sbjct: 166 -SVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFK 224
Query: 377 DTICWNSMIAGF--CQSGRMDEALDLFRQM--------------------------PKKN 408
+ + WNSMIA F C G+ +A+ +F +M P +
Sbjct: 225 NLVTWNSMIAAFQCCNLGK--KAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEV 282
Query: 409 SVSWNTMISGYAQAGQMDSAE------NIFQAMEE---------------RNIVSWNSLI 447
S + S ++G + E ++ M E R+IV+WN +I
Sbjct: 283 SKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGII 342
Query: 448 TGFLQNSLYFDALKSLVLMGR---EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS 504
T F +D +++ L G+ E PD TF + +H ++K
Sbjct: 343 TAFA----VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKG 398
Query: 505 GYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAF 564
G++ D ++N+LI YAKCG ++ +VF ++ D++SWNS++ Y+L+G F
Sbjct: 399 GFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVF 458
Query: 565 KQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGR 624
++M ++ PD TFI +LSACSHAG +GL +F+ M E P HY+C++D+L R
Sbjct: 459 QKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSR 515
Query: 625 MGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSEL-EPHNASNYIT 683
R EA V++ M + +A +W +LLG+CR H N +G+ AA +L EL EP N+ +YI
Sbjct: 516 AERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQ 575
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPE 738
+SN++ G + E M R K P SW E+ N++ F S GR RP+
Sbjct: 576 MSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFAS--GGRHRPD 628
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 196/419 (46%), Gaps = 61/419 (14%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
+N++ N +I+++AK G I ARQ+FD M +RN+VSW +I GY+ +E LF M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 125 -----PERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC----WNAVIAGYAK-- 173
P S +++ +C GK L KL C NAVI+ Y +
Sbjct: 154 LSHCFPNEFTLS-SVLTSCRYEPGKQVHGLAL------KLGLHCSIYVANAVISMYGRCH 206
Query: 174 -KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
+A VF + K+LV++NSM+A + A+ F +M V G
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV--------G 258
Query: 233 FVNSGDLSSARQLFEK---IPNPNA-----VSWVTMLCGFARHGKI-------------- 270
F + L+ L++ +PN + + +T+ G ++
Sbjct: 259 FDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLED 318
Query: 271 -TEARRLFDSMP-CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIIN 324
T+ +LF M C+++V+WN +I A+A + A+ LF ++ + D ++++++
Sbjct: 319 YTDCYKLFMEMSHCRDIVAWNGIITAFAV-YDPERAIHLFGQLRQEKLSPDWYTFSSVLK 377
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTIC 380
+ A ++ Q+ A+T L + LI + G +D ++F+ + +RD +
Sbjct: 378 ACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS 437
Query: 381 WNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
WNSM+ + G++D L +F++M +S ++ ++S + AG+++ IF++M E+
Sbjct: 438 WNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEK 496
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 130/581 (22%), Positives = 219/581 (37%), Gaps = 167/581 (28%)
Query: 140 TRKGKLEKARELLELVPDKLDTA-CWNAVIAGYAKKGQFSDAEKVFNLM---PV---KDL 192
R G + +A L P +L + + A+ A++ D + + M P +++
Sbjct: 37 VRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNV 96
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKI--- 249
+ N ++ Y + G + A F+ M E+NVVSW +++G+V +G+ LF +
Sbjct: 97 ILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH 156
Query: 250 --PNPNAVSWVTMLC----GFARHG----------------------------KITEARR 275
PN +S V C G HG EA
Sbjct: 157 CFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWT 216
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEA 335
+F+++ KN+V+WN+MIAA+ +A+ +F++M H DGV G+ R L+
Sbjct: 217 VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM-HSDGV-------GFDRATLLNIC 268
Query: 336 REVYNQ---MP------CKDIAAETALMSGLIQTGRVDEA---------------SKMFN 371
+Y +P C + + T + SGL+ V A K+F
Sbjct: 269 SSLYKSSDLVPNEVSKCCLQLHSLT-VKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFM 327
Query: 372 QLS-TRDTICWNSMIAGFCQSGRMDEALDLFRQM-PKKNSVSW----------------- 412
++S RD + WN +I F + A+ LF Q+ +K S W
Sbjct: 328 EMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTAR 386
Query: 413 ---------------------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFL 451
N++I YA+ G +D +F M+ R++VSWNS++ +
Sbjct: 387 HALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY- 445
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
SL+ L + + PD +TF
Sbjct: 446 --SLHGQVDSILPVFQKMDINPDSATFI-------------------------------- 471
Query: 512 VSNALIAMYAKCGRVESAEQVFTAI-----ECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
AL++ + GRVE ++F ++ L + +I + EA + KQ
Sbjct: 472 ---ALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQ 528
Query: 567 MLSEEVVPDQVTFIGMLSACSHAG---LANQGLDLFKCMVE 604
M + PD V +I +L +C G L D K +VE
Sbjct: 529 MPMD---PDAVVWIALLGSCRKHGNTRLGKLAADKLKELVE 566
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 165/400 (41%), Gaps = 85/400 (21%)
Query: 54 EAVRVFSNTIHKNLVTYNSMISVF--AKNGKISDARQL--------FDKMSQRNLVS--- 100
EA VF KNLVT+NSMI+ F GK + + FD+ + N+ S
Sbjct: 213 EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLY 272
Query: 101 ---------------------------WNTMIAGYL---HNSMVEEASKLFDVMPE---- 126
T +A L ++ M+E+ + + + E
Sbjct: 273 KSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHC 332
Query: 127 RDNFSWALMITCYTRKGKLEKARELL------ELVPD-----KLDTACWNAVIAGYAKKG 175
RD +W +IT + E+A L +L PD + AC V A +A
Sbjct: 333 RDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHA--- 388
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN 235
S +V + D V NS++ Y + G + L + F+ M ++VVSWN M+ +
Sbjct: 389 -LSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSL 447
Query: 236 SGDLSSARQLFEKIP-NPNAVSWVTMLCGFARHGKITEARRLFDSM-----PCKNVVSWN 289
G + S +F+K+ NP++ +++ +L + G++ E R+F SM + +
Sbjct: 448 HGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYA 507
Query: 290 AMIAAYAQDLQIDEAVKLFIKMP-HKDGVSWTTII-----NGYIRVGKLDEAREVYNQMP 343
+I ++ + EA ++ +MP D V W ++ +G R+GKL +
Sbjct: 508 CVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADK------- 560
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQ--LSTRDTICW 381
K++ T MS IQ + A FN+ LS ++ W
Sbjct: 561 LKELVEPTNSMS-YIQMSNIYNAEGSFNEANLSIKEMETW 599
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 19 MTSMKHKLTIGS--IGGKHVFNK--NQQIIH-LGKLGKVEEAVRVFSNTIHKNLVTYNSM 73
+ + +H L+I + I G + + N +IH K G ++ +RVF + +++V++NSM
Sbjct: 382 LVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSM 441
Query: 74 ISVFAKNGKISDARQLFDKMS-QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF-- 130
+ ++ +G++ +F KM + ++ +++ H VEE ++F M E+
Sbjct: 442 LKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLP 501
Query: 131 ---SWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFS----DAEKV 183
+A +I +R + +A E+++ +P D W A++ K G A+K+
Sbjct: 502 QLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKL 561
Query: 184 FNLMPVKDLVSYNSMLAGYTQNG 206
L+ + +SY M Y G
Sbjct: 562 KELVEPTNSMSYIQMSNIYNAEG 584
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 239/455 (52%), Gaps = 10/455 (2%)
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQ---LSTR 376
T ++ + +G + AR+V+++M I L G ++ E+ ++ + L R
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENI 431
D + ++ Q G L + K + ++ Y + G++ SAE +
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL 166
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
F++M+ +++V+WN+ + +Q AL+ M + + D T
Sbjct: 167 FESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSL 226
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGY 551
++G ++++ K ++ V NA + M+ KCG E+A +F ++ +++SW+++I GY
Sbjct: 227 EIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGY 286
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE--DFAIE 609
A+NG + EA F M +E + P+ VTF+G+LSACSHAGL N+G F MV+ D +E
Sbjct: 287 AMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLE 346
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMR 669
P EHY+C+VDLLGR G LEEA+ ++ M V+ + G+WG+LLGAC VH+++ +G+ A
Sbjct: 347 PRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADV 406
Query: 670 LSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLS 729
L E P S ++ LSN++A AG+W+ V+++R MR K+ S +E + +I F
Sbjct: 407 LVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNR 466
Query: 730 DDSGRLRPETIQIILNAISAHMRDKFNVFNMQSVF 764
D + + I L+ I +R V + SVF
Sbjct: 467 GDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 191/419 (45%), Gaps = 49/419 (11%)
Query: 71 NSMISVFAKN----GKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA----SKLFD 122
NS+++ +N G + ARQ+FD+M + + WNT+ GY+ N + E+ K+ D
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRD 102
Query: 123 VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAV----IAGYAKKGQFS 178
+ D F++ ++ ++ G L V K C V + Y K G+ S
Sbjct: 103 LGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV-KYGFGCLGIVATELVMMYMKFGELS 161
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS-- 236
AE +F M VKDLV++N+ LA Q G +AL +F KM V + V +++
Sbjct: 162 SAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACG 221
Query: 237 --GDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA 290
G L +++++ + N + L + G AR LF+ M +NVVSW+
Sbjct: 222 QLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWST 281
Query: 291 MIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQM---- 342
MI YA + EA+ LF M ++ + V++ +++ G ++E + ++ M
Sbjct: 282 MIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341
Query: 343 -----PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAGFCQSGR--- 393
P K+ A ++ L ++G ++EA + ++ DT W +++ G C R
Sbjct: 342 DKNLEPRKEHYA--CMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL-GACAVHRDMI 398
Query: 394 --MDEALDLFRQMPKKNSVSWNTMISG-YAQAGQMDSAENIFQAMEE---RNIVSWNSL 446
A L P S++ ++S YA AG+ D + + M + + + +++S+
Sbjct: 399 LGQKVADVLVETAPDIG--SYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 58/261 (22%)
Query: 47 GKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
G+LG +E ++ I N++ N+ + + K G AR LF++M QRN+VSW+
Sbjct: 221 GQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWS 280
Query: 103 TMIAGYLHNSMVEEASKLFDVMPE---RDNF----------------------------- 130
TMI GY N EA LF M R N+
Sbjct: 281 TMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Query: 131 ----------SWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDA 180
+A M+ R G LE+A E ++ +P + DT W A++ A
Sbjct: 341 NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILG 400
Query: 181 EKVFNLM--PVKDLVSYNSMLAG-YTQNGK---MGLALHFFEKMAEKNVVSW-NLMVSG- 232
+KV +++ D+ SY+ +L+ Y GK + K+ K V ++ ++ G
Sbjct: 401 QKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGK 460
Query: 233 --FVNSGDLS--SARQLFEKI 249
F N GD S ++ ++EK+
Sbjct: 461 IHFFNRGDKSHPQSKAIYEKL 481
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 226 bits (576), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 183/701 (26%), Positives = 334/701 (47%), Gaps = 61/701 (8%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----- 125
N++IS + K G +A +F +S +VS+ +I+G+ ++ EA K+F M
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLELVPDK--LDTA-CWNAVIAGYAKKGQFS--DA 180
+ + +++ ++T R + ++ L+ L++ N++++ Y K S D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN---VVSWNL--MVSGFVN 235
K+F+ +P +D+ S+N++++ + GK A F +M V S+ L ++S +
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 236 SGDLSSARQLFEK---IPNPNAVSWVTMLCGF-ARHGKITEARRLFDSMPCKNVVSWNAM 291
S L R+L + I +S L GF ++ + + L++ M ++ V++ M
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 292 IAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM-----PCKD 346
I AY +D AV++F + K+ +++ ++ G+ R G +A +++ M D
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 347 IAAETAL-MSGLIQTGRVDEASKMFN-QLSTRDTICWNSMIAGFC-QSGRMDEALDLFRQ 403
+ +A+ GL+ +V E F + T C + + C + RM +A ++F Q
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 404 MPKK--NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALK 461
P +S + ++I GYA+ G D A ++F + L+ D +
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRT--------------LCEQKLFLDEVS 523
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
+++ G ++G Q+H Y LK+GY +D+ + N+LI+MYA
Sbjct: 524 LTLILAVCG----------------TLGFREMGYQIHCYALKAGYFSDISLGNSLISMYA 567
Query: 522 KCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
KC + A ++F + D+ISWNSLIS Y L EA + +M +E+ PD +T
Sbjct: 568 KCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTL 627
Query: 582 MLSA--CSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
++SA + + + DLF M + IEP EHY+ V +LG G LEEA + + M
Sbjct: 628 VISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMP 687
Query: 640 VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVER 699
V+ + +LL +CR+H N + + A + +P S YI SN+++ +G W E
Sbjct: 688 VQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEM 747
Query: 700 LRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETI 740
+R MR++ K P SWI +N+I F + D+ + + I
Sbjct: 748 IREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDI 788
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 137/647 (21%), Positives = 268/647 (41%), Gaps = 149/647 (23%)
Query: 122 DVMPERDNFSWALMITCYTRKGKLEKA--RELLELVPDKLDTACWNAVIAGYAKKGQFSD 179
D+ D F + L ++ ++ KA L+L +K T NA+I+ Y K G +
Sbjct: 75 DIESVIDGFFYLLRLSAQYHDVEVTKAVHASFLKLREEK--TRLGNALISTYLKLGFPRE 132
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A VF + +VSY ++++G+++ AL F +M + +V
Sbjct: 133 AILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV--------------- 177
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFAR----------HGKITEARRLFDSMPCKNVVSWN 289
PN ++V +L R HG I ++ L +V N
Sbjct: 178 -----------QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFL------NSVFVSN 220
Query: 290 AMIAAYAQD--LQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM----- 342
++++ Y +D D+ +KLF ++P +D SW T+++ ++ GK +A +++ +M
Sbjct: 221 SLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEG 280
Query: 343 -------------PCKDIAA--------ETALMSGLIQTGRVDEA--------------S 367
C D + A+ GL+Q V+ A
Sbjct: 281 FGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVE 340
Query: 368 KMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDS 427
++ + +D + + MI + G +D A+++F + +KN++++N +++G+ + G
Sbjct: 341 SLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLK 400
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
A +F M +R + +T F S A+ + L+ +
Sbjct: 401 ALKLFTDMLQRGVE-----LTDFSLTS----AVDACGLVSEK------------------ 433
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT--AIECVDLISWN 545
+V Q+H + +K G + + AL+ M +C R+ AE++F +
Sbjct: 434 ----KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATT 489
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
S+I GYA NG +A F + L E+ + D+V+ +L+ C G G +
Sbjct: 490 SIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ-----IH 544
Query: 605 DFAIEPLAEHYS------CLVDLLGRMGRLEEA---FNVVRGMDVKANAGLWGSLLGACR 655
+A++ A ++S L+ + + ++A FN +R DV + W SL+
Sbjct: 545 CYALK--AGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVIS----WNSLISCYI 598
Query: 656 VHKNLE--IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
+ +N + + ++ M E++P + ITL+ + A R+ E +L
Sbjct: 599 LQRNGDEALALWSRMNEKEIKP----DIITLT-LVISAFRYTESNKL 640
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 153/345 (44%), Gaps = 34/345 (9%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTM 104
G V+ AV +F+N KN +TYN++++ F +NG A +LF M QR + S +
Sbjct: 364 FGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSA 423
Query: 105 I--AGYLHNSMVEEASKLFDV---MPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 159
+ G + V E F + AL+ C TR ++ A E+ + P L
Sbjct: 424 VDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMC-TRCERMADAEEMFDQWPSNL 482
Query: 160 DTA-CWNAVIAGYAKKGQFSDAEKVFNLMPVK-----DLVSYNSMLA--GYTQNGKMGLA 211
D++ ++I GYA+ G A +F+ + D VS +LA G +MG
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 212 LHFFEKMAE--KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGK 269
+H + A ++ N ++S + D A ++F + + +SW +++ +
Sbjct: 543 IHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRN 602
Query: 270 ITEARRLFDSMPCK----NVVSWNAMIAA--YAQDLQIDEAVKLFIKMPHKDGVSWTT-I 322
EA L+ M K ++++ +I+A Y + ++ LF+ M + TT
Sbjct: 603 GDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEH 662
Query: 323 INGYIRV----GKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV 363
++RV G L+EA + N MP + E +++ L+ + R+
Sbjct: 663 YTAFVRVLGHWGLLEEAEDTINSMP---VQPEVSVLRALLDSCRI 704
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 184/417 (44%), Gaps = 53/417 (12%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
++ VT+ MI+ + G + A ++F ++++N +++N ++AG+ N +A KLF M
Sbjct: 349 QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDM 408
Query: 125 PER----DNFSWALMI-TCYTRKGKLEKARELLELVPDKLDTA---CWNAVIAGYAKKGQ 176
+R +FS + C K K E + K TA C + + +
Sbjct: 409 LQRGVELTDFSLTSAVDACGLVSEK--KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE 466
Query: 177 -FSDAEKVFNLMP--VKDLVSYNSMLAGYTQNGKMGLALHFFEK-MAEKNV----VSWNL 228
+DAE++F+ P + + S++ GY +NG A+ F + + E+ + VS L
Sbjct: 467 RMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTL 526
Query: 229 MVS-----GFVNSGDLSSARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
+++ GF G L F I N S ++M +A+ +A ++F++
Sbjct: 527 ILAVCGTLGFREMGYQIHCYALKAGYFSDISLGN--SLISM---YAKCCDSDDAIKIFNT 581
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIING--YIRVGKLD 333
M +V+SWN++I+ Y DEA+ L+ +M K D ++ T +I+ Y KL
Sbjct: 582 MREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLS 641
Query: 334 EAREVYNQMPC-KDIAAETALMSGLIQT----GRVDEASKMFNQLSTRDTICWNSMIAGF 388
R+++ M DI T + ++ G ++EA N + + + S++
Sbjct: 642 SCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEV---SVLRAL 698
Query: 389 CQSGRMDEALDLFRQMPK-----KNSVSWNTMISG--YAQAGQMDSAENIFQAMEER 438
S R+ + +++ K K ++ Y+ +G +E I + M ER
Sbjct: 699 LDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRER 755
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 225/422 (53%), Gaps = 52/422 (12%)
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQ----TGRVDEASKMFNQLSTRDT--ICWNSMI 385
+D V++ +P + + S L++ G + A ++F+++S RD+ WNS+I
Sbjct: 108 IDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLI 167
Query: 386 AGFCQSGRMDEALDLFRQM------PKKNSVS---------------------------- 411
+G+ + G+ ++A+ L+ QM P + +
Sbjct: 168 SGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFG 227
Query: 412 -----WNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
N ++ YA+ G + A N+F + ++ VSWNS++TG+L + L +AL LM
Sbjct: 228 YDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLM 287
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
+ G +PD+ G QLH ++++ G +L V+NALI +Y+K G++
Sbjct: 288 VQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWELSVANALIVLYSKRGQL 344
Query: 527 ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
A +F + D +SWN++IS ++ N K F+QM PD +TF+ +LS C
Sbjct: 345 GQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLC 401
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN-VVRGMDVKANAG 645
++ G+ G LF M +++ I+P EHY+C+V+L GR G +EEA++ +V+ M ++A
Sbjct: 402 ANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPT 461
Query: 646 LWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMR 705
+WG+LL AC +H N +IGE AA RL ELEP N N+ L ++++A R E+VER+R +M
Sbjct: 462 VWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMV 521
Query: 706 DK 707
D+
Sbjct: 522 DR 523
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 200/429 (46%), Gaps = 45/429 (10%)
Query: 49 LGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRN--LVSWN 102
L ++ VRV + NL + ++ ++A G A ++FD+MS+R+ +WN
Sbjct: 105 LRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWN 164
Query: 103 TMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKAREL-LELVPD 157
++I+GY E+A L+ M E D F++ ++ G ++ + +LV +
Sbjct: 165 SLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE 224
Query: 158 KL--DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
D NA++ YAK G A VF+++P KD VS+NSML GY +G + AL F
Sbjct: 225 GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIF 284
Query: 216 EKMAEKNVVSWNLMVSG-FVNSGDLSSARQLFEKIPNPNAVSWV-----TMLCGFARHGK 269
M + + + +S RQL + + W ++ +++ G+
Sbjct: 285 RLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIR-RGMEWELSVANALIVLYSKRGQ 343
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-----DGVSWTTIIN 324
+ +A +FD M ++ VSWNA+I+A++++ +K F +M H+ DG+++ ++++
Sbjct: 344 LGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQM-HRANAKPDGITFVSVLS 399
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAET-----ALMSGLI-QTGRVDEASKMFNQ---LST 375
G +++ +++ M K+ + A M L + G ++EA M Q L
Sbjct: 400 LCANTGMVEDGERLFSLM-SKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEA 458
Query: 376 RDTICWNSMIAGFCQSGRMD----EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENI 431
T+ W +++ G D A LF P N ++ +I Y++A + + E +
Sbjct: 459 GPTV-WGALLYACYLHGNTDIGEVAAQRLFELEP-DNEHNFELLIRIYSKAKRAEDVERV 516
Query: 432 FQAMEERNI 440
Q M +R +
Sbjct: 517 RQMMVDRGL 525
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 160/350 (45%), Gaps = 39/350 (11%)
Query: 133 ALMITCYTRKGKLEKARELLELVPDKL---DTACWNAVIAGYAKKGQFSDAEKVFNLMPV 189
+L+ TCY+ + ++ + L+P L + + ++ YA G A +VF+ M
Sbjct: 97 SLLETCYSLRA-IDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSK 155
Query: 190 KD--LVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE 247
+D ++NS+++GY + G+ A+ + +MAE V
Sbjct: 156 RDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK----------------------- 192
Query: 248 KIPNPNAVSWVTMLCGFARHGKITEA--RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAV 305
P+ V CG +I EA R L +V NA++ YA+ I +A
Sbjct: 193 --PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 306 KLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDE 365
+F +PHKD VSW +++ GY+ G L EA +++ M I + +S ++ +
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFK 310
Query: 366 ASKMFNQLSTRDTICW-----NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYA 420
+ + R + W N++I + + G++ +A +F QM ++++VSWN +IS ++
Sbjct: 311 HGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHS 370
Query: 421 Q-AGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
+ + + E + +A + + +++ S+++ + D + LM +E
Sbjct: 371 KNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE 420
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 108/267 (40%), Gaps = 49/267 (18%)
Query: 33 GKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDK 92
G V+ N ++ K G + +A VF HK+ V++NSM++ + +G + +A +F
Sbjct: 227 GYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRL 286
Query: 93 MSQ-----------------------RNLVSW-------------NTMIAGYLHNSMVEE 116
M Q R L W N +I Y + +
Sbjct: 287 MVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQ 346
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQ 176
A +FD M ERD SW +I+ +++ K E + K D + +V++ A G
Sbjct: 347 ACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGM 406
Query: 177 FSDAEKVFNLMPVK-----DLVSYNSMLAGYTQNGKMGLALHFF--EKMAEKNVVSWNLM 229
D E++F+LM + + Y M+ Y + G M A E E W +
Sbjct: 407 VEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGAL 466
Query: 230 -----VSGFVNSGDLSSARQLFEKIPN 251
+ G + G++ +A++LFE P+
Sbjct: 467 LYACYLHGNTDIGEV-AAQRLFELEPD 492
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 210/405 (51%), Gaps = 8/405 (1%)
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
AR ++ M DI ++ G + E +F ++ + N ++ +
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 395 DEALDLFRQMP--------KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
+AL+ RQ+ N T+I+ Y + +DSA +F + E +V +N++
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
ITG+ + + +AL M + KP++ T +G +H+Y K +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
+ V+ ALI M+AKCG ++ A +F + D +W+++I YA +G A ++ F++
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
M SE V PD++TF+G+L+ACSH G +G F MV F I P +HY +VDLL R G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 627 RLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSN 686
LE+A+ + + + LW LL AC H NL++ E + R+ EL+ + +Y+ LSN
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 687 MHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDD 731
++A +WE V+ LR +M+D++A K+PGCS IEV N + F S D
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGD 486
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
M A ++F+AM E +IV +NS+ G+ + + + V + +G PD TF
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
+ G QLH +K G ++++V LI MY +C V+SA VF I ++
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
+N++I+GYA EA F++M + + P+++T + +LS+C+ G LDL K
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLG----SLDLGK-W 251
Query: 603 VEDFAIEPLAEHYSC--------LVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
+ +A +H C L+D+ + G L++A ++ M K + W +++ A
Sbjct: 252 IHKYA----KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAY 306
Query: 655 RVHKNLE--IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
H E + F MR ++P + ++ L N + GR EE
Sbjct: 307 ANHGKAEKSMLMFERMRSENVQPDEIT-FLGLLNACSHTGRVEE 349
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 174/380 (45%), Gaps = 56/380 (14%)
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSW-ALM 135
+S AR LF+ MS+ ++V +N+M GY + E LF ++P DN+++ +L+
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILP--DNYTFPSLL 136
Query: 136 ITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSY 195
C K LE+ R+L L + K D ++
Sbjct: 137 KACAVAKA-LEEGRQLHCL-----------------SMKLGLDD-----------NVYVC 167
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE----KIPN 251
+++ YT+ + A F+++ E VV +N M++G+ + A LF K
Sbjct: 168 PTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLK 227
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKL 307
PN ++ +++L A G + + + CK V A+I +A+ +D+AV +
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSI 287
Query: 308 FIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRV 363
F KM +KD +W+ +I Y GK +++ ++ +M +++ + GL+ TGRV
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 364 DEASKMFNQLSTRDTIC-----WNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMIS 417
+E K F+Q+ ++ I + SM+ ++G +++A + ++P + W +++
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLA 407
Query: 418 GYAQAGQMDSAENIFQAMEE 437
+ +D AE + + + E
Sbjct: 408 ACSSHNNLDLAEKVSERIFE 427
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 134/298 (44%), Gaps = 27/298 (9%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
N+ ++I+++ + + AR +FD++ + +V +N MI GY + EA LF M
Sbjct: 163 NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 126 ER----DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW-----NAVIAGYAKKGQ 176
+ + + +++ G L+ + + + K + C A+I +AK G
Sbjct: 223 GKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA--KKHSFCKYVKVNTALIDMFAKCGS 280
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVN- 235
DA +F M KD ++++M+ Y +GK ++ FE+M +NV + G +N
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
Query: 236 ---SGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV-V 286
+G + R+ F ++ + P+ + +M+ +R G + +A D +P +
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPM 400
Query: 287 SWNAMIAAYAQDLQIDEAVKL---FIKMPHKDGVSWTTIINGYIRVGK---LDEAREV 338
W ++AA + +D A K+ ++ G + + N Y R K +D R+V
Sbjct: 401 LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 458
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 240/455 (52%), Gaps = 15/455 (3%)
Query: 315 DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS 374
D + ++ Y+++ +++ AR+++++M ++ + T+++SG G+ A MF ++
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 375 TRDTICWN----SMIAGFCQS---GRMDEALDLFRQMP--KKNSVSWNTMISGYAQAGQM 425
+ N + + C + R+ + + ++ ++N V ++++ Y + +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 426 DSAENIFQAM--EERNIVSWNSLITGFLQNSLYFDALKSLVLM--GREGKKPDQSTFXXX 481
++A +F +M RN+VSW S+IT + QN+ +A++ + +Q
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL 541
Q G H + + GY ++ V+ +L+ MYAKCG + AE++F I C +
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
IS+ S+I A +G A K F +M++ + P+ VT +G+L ACSH+GL N+GL+
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 362
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAG--LWGSLLGACRVHKN 659
M E + + P + HY+C+VD+LGR GR++EA+ + + ++V A G LWG+LL A R+H
Sbjct: 363 MAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR 422
Query: 660 LEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
+EI A+ RL + S YI LSN +A +G WE+ E LR+ M+ K CSWIE
Sbjct: 423 VEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIE 482
Query: 720 VQNQIQCFLSDDSGRLRPETIQIILNAISAHMRDK 754
++ + F + D I+ L + M+++
Sbjct: 483 NKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKER 517
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 186/432 (43%), Gaps = 85/432 (19%)
Query: 59 FSNTIH---------KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
F+N +H + T N ++ + K +I+ AR+LFD+M + N+VSW ++I+GY
Sbjct: 47 FTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYN 106
Query: 110 HNSMVEEASKLFDVMPE-----RDNFSWA-LMITCY----TRKGKLEKARELLELVPDKL 159
+ A +F M E + +++A + C +R GK AR LE+ +
Sbjct: 107 DMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHAR--LEISGLRR 164
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMP--VKDLVSYNSMLAGYTQNGKMGLALHFFE- 216
+ ++++ Y K A +VF+ M +++VS+ SM+ Y QN + A+ F
Sbjct: 165 NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS 224
Query: 217 -------------------------------KMA---------EKNVVSWNLMVSGFVNS 236
K+A E N V ++ +
Sbjct: 225 FNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKC 284
Query: 237 GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMI 292
G LS A ++F +I + +S+ +M+ A+HG A +LFD M N V+ ++
Sbjct: 285 GSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVL 344
Query: 293 AAYAQDLQIDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
A + ++E ++ M K GV +T +++ R G++DEA E+ + ++
Sbjct: 345 HACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTI---EV 401
Query: 348 AAETA--LMSGLIQTGR-------VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL 398
AE L L+ GR V EASK Q + + T + ++ + SG +++
Sbjct: 402 GAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSE 461
Query: 399 DLFRQMPKKNSV 410
L +M + +V
Sbjct: 462 SLRLEMKRSGNV 473
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 495 NQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALN 554
N LH LK G+ +D F N L+ Y K + +A ++F + +++SW S+ISGY
Sbjct: 49 NLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDM 108
Query: 555 GYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G A F++M + V P++ TF + ACS + G ++ +E +
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNI-HARLEISGLRRNIV 167
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGM-DVKANAGLWGSLLGA----CRVHKNLEI 662
S LVD+ G+ +E A V M N W S++ A R H+ +E+
Sbjct: 168 VSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIEL 221
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 174/302 (57%)
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
++ YA G++ A ++F+ + E ++ +WN+L+ + + + L+L R +P+
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPN 215
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
+ + G H Y+LK+ + FV +LI +Y+KCG + A +VF
Sbjct: 216 ELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFD 275
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ 594
+ D+ +N++I G A++G+ E + +K ++S+ +VPD TF+ +SACSH+GL ++
Sbjct: 276 EMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDE 335
Query: 595 GLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
GL +F M + IEP EHY CLVDLLGR GRLEEA ++ M VK NA LW S LG+
Sbjct: 336 GLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSS 395
Query: 655 RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPG 714
+ H + E GE A L LE N+ NY+ LSN++A RW +VE+ R LM+D R K PG
Sbjct: 396 QTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPG 455
Query: 715 CS 716
S
Sbjct: 456 IS 457
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 152/359 (42%), Gaps = 41/359 (11%)
Query: 28 IGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISD-- 85
I +IG H +++HL + A+ + + ++ YN++IS N +
Sbjct: 32 IITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTH 91
Query: 86 -ARQLFDKM--SQRNLVSWNTMIAGYL------------HNSMVEEASKLFDVMPERDNF 130
A L+D++ S+ N V N L H + F D F
Sbjct: 92 LAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRF 151
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQF-SDAEKVFNLMPV 189
A ++ Y GKL +AR L E + + D A WN ++A YA + SD E + M +
Sbjct: 152 VQAALVGFYANCGKLREARSLFERIREP-DLATWNTLLAAYANSEEIDSDEEVLLLFMRM 210
Query: 190 KDLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKNVVSWNLMVSGFVNS---------GDL 239
+ + S++A +G F + A V+ NL ++ FV + G L
Sbjct: 211 QVRPNELSLVALIKSCANLG---EFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCL 267
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA----MIAAY 295
S AR++F+++ + + M+ G A HG E L+ S+ + +V +A I+A
Sbjct: 268 SFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISAC 327
Query: 296 AQDLQIDEAVKLFIKMPHKDGVS-----WTTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
+ +DE +++F M G+ + +++ R G+L+EA E +MP K A
Sbjct: 328 SHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT 386
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 15/190 (7%)
Query: 261 LCGF-ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQID---EAVKLFIKMP-HKD 315
L GF A GK+ EAR LF+ + ++ +WN ++AAYA +ID E + LF++M +
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPN 215
Query: 316 GVSWTTIINGYIRVGKLDEA--REVY---NQMPCKDIAAETALMSGLIQTGRVDEASKMF 370
+S +I +G+ VY N + T+L+ + G + A K+F
Sbjct: 216 ELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVG-TSLIDLYSKCGCLSFARKVF 274
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMD 426
+++S RD C+N+MI G G E ++L++ + + +S ++ IS + +G +D
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 427 SAENIFQAME 436
IF +M+
Sbjct: 335 EGLQIFNSMK 344
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 133/290 (45%), Gaps = 23/290 (7%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMV---EEASKLFDVMPERD 128
+++ +A GK+ +AR LF+++ + +L +WNT++A Y ++ + EE LF M R
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRP 214
Query: 129 N-FSWALMITCYTRKGKLEK---ARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVF 184
N S +I G+ + A + L+ ++I Y+K G S A KVF
Sbjct: 215 NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLS 240
+ M +D+ YN+M+ G +G + ++ + + +V ++ + +S +SG +
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 241 SARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAA 294
Q+F + P + ++ R G++ EA MP K N W + + +
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 295 YAQ--DLQIDE-AVKLFIKMPHKDGVSWTTIINGYIRVGK---LDEAREV 338
D + E A+K + + ++ ++ + N Y V + +++ RE+
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTREL 444
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 49/254 (19%)
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
CK + + + +I G + L T+C + AL + RQ
Sbjct: 19 CKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-------------LSYALSILRQ 65
Query: 404 MPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSL 463
+P + +NT+IS +IVS ++ L SLY L S
Sbjct: 66 IPNPSVFLYNTLIS---------------------SIVSNHNSTQTHLAFSLYDQILSSR 104
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXX-XQVGNQLHEYILK--SGYINDLFVSNALIAMY 520
R P++ T+ + G LH ++LK +D FV AL+ Y
Sbjct: 105 SNFVR----PNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFY 160
Query: 521 AKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI----EAFKAFKQMLSEEVVPDQ 576
A CG++ A +F I DL +WN+L++ YA N I E F +M +V P++
Sbjct: 161 ANCGKLREARSLFERIREPDLATWNTLLAAYA-NSEEIDSDEEVLLLFMRM---QVRPNE 216
Query: 577 VTFIGMLSACSHAG 590
++ + ++ +C++ G
Sbjct: 217 LSLVALIKSCANLG 230
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 142/361 (39%), Gaps = 29/361 (8%)
Query: 239 LSSARQLFEKIPNPNAVSWVTMLCGFARHGKITE---ARRLFDSMPC-------KNVVSW 288
LS A + +IPNP+ + T++ + T+ A L+D + N ++
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 289 NAMIAAYAQDLQ-------IDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQ 341
++ A D Q + V F++ + D ++ Y GKL EAR ++ +
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFER 175
Query: 342 MPCKDIAAETALMSGLIQTGRVD---EASKMFNQLSTR-DTICWNSMIAGFCQSGRMDEA 397
+ D+A L++ + +D E +F ++ R + + ++I G
Sbjct: 176 IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRG 235
Query: 398 L----DLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN 453
+ + + N ++I Y++ G + A +F M +R++ +N++I G +
Sbjct: 236 VWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVH 295
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
+ ++ + +G PD +TF G Q+ +K+ Y + V
Sbjct: 296 GFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNS-MKAVYGIEPKVE 354
Query: 514 N--ALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+ L+ + + GR+E AE+ + + W S + +G A K +L
Sbjct: 355 HYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGL 414
Query: 571 E 571
E
Sbjct: 415 E 415
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 33/244 (13%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQ---LFDKMSQR-NLVSWNTMI 105
GK+ EA +F +L T+N++++ +A + +I + LF +M R N +S +I
Sbjct: 164 GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALI 223
Query: 106 AG-----------YLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLEL 154
+ H +++ L + F +I Y++ G L AR++ +
Sbjct: 224 KSCANLGEFVRGVWAHVYVLKNNLTL-------NQFVGTSLIDLYSKCGCLSFARKVFDE 276
Query: 155 VPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGL 210
+ + D +C+NA+I G A G + +++ + V D ++ ++ + +G +
Sbjct: 277 MSQR-DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDE 335
Query: 211 ALHFFEKMA-----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-NPNAVSWVTMLCGF 264
L F M E V + +V SG L A + +K+P PNA W + L
Sbjct: 336 GLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSS 395
Query: 265 ARHG 268
HG
Sbjct: 396 QTHG 399
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 175/673 (26%), Positives = 305/673 (45%), Gaps = 90/673 (13%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA------SKLFDVM 124
N++IS++ K G++S A ++FD+M +RN VS+NT+I GY V++A + F +
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 125 PERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVF 184
P + S L + + L+ D ++ Y + AE+VF
Sbjct: 113 PNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVF 172
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLS 240
MP K L ++N M++ G + + FF ++ A S+ ++ G DL
Sbjct: 173 EDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLD 232
Query: 241 SARQLFEKIPNPN---AVSWV-TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
++QL +S V +++ + + G A R+F ++VSWNA+I A A
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 297 QDLQIDEAVKLFIKMPH----------------------------------KDG-----V 317
+ +A+KLF+ MP K+G V
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 318 SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSG---------------LIQTG- 361
+I+ Y + G L+++R ++ + K+I AL+SG ++Q G
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGF 412
Query: 362 -----------------RVDEASKMFNQLSTRDT-ICWNSMIAGFCQSGRMDEALDLFRQ 403
+ + + ++ D +S++ + ++ M++AL L
Sbjct: 413 RPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDW 472
Query: 404 MPKKNSVSWNTMISG-YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
SV +++G Y++ GQ + + +E+ + VSWN I ++ + + ++
Sbjct: 473 ASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIEL 532
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY-INDLFVSNALIAMYA 521
M + +PD+ TF +G+ +H I K+ + D FV N LI MY
Sbjct: 533 FKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYG 592
Query: 522 KCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
KCG + S +VF +LI+W +LIS ++GY EA + FK+ LS PD+V+FI
Sbjct: 593 KCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFIS 652
Query: 582 MLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
+L+AC H G+ +G+ LF+ M +D+ +EP +HY C VDLL R G L+EA +++R M
Sbjct: 653 ILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFP 711
Query: 642 ANAGLWGSLLGAC 654
A+A +W + L C
Sbjct: 712 ADAPVWRTFLDGC 724
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 183/426 (42%), Gaps = 52/426 (12%)
Query: 34 KHVFNKNQ----QIIHLGKLGKVEEAVRVFSNTIHKN-----LVTYNSMISVFAKNGKIS 84
+H F+ NQ ++ + L ++ R + KN +V N++I +AK G +
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 85 DARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM-----PERDNFSWALMITCY 139
D+R FD + +N+V WN +++GY + S ++ P FS AL C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCV 428
Query: 140 TRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
T +L++ ++ + + + ++++ YAK +DA + + V +++
Sbjct: 429 T---ELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIV 485
Query: 200 AG-YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNA 254
AG Y++ G+ ++ + + + VSWN+ ++ S +LF+ + P+
Sbjct: 486 AGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDK 545
Query: 255 VSWVTM--LC--------GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
++V++ LC G + HG IT+ C + N +I Y + I
Sbjct: 546 YTFVSILSLCSKLCDLTLGSSIHGLITKT-----DFSCADTFVCNVLIDMYGKCGSIRSV 600
Query: 305 VKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC----KDIAAETALMSGLIQT 360
+K+F + K+ ++WT +I+ G EA E + + D + ++++
Sbjct: 601 MKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHG 660
Query: 361 GRVDEASKMFNQLSTRDT-------ICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSW 412
G V E +F ++ C ++A ++G + EA L R+MP ++ W
Sbjct: 661 GMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLA---RNGYLKEAEHLIREMPFPADAPVW 717
Query: 413 NTMISG 418
T + G
Sbjct: 718 RTFLDG 723
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
L S + ++V N +I++Y K G V A +VF + + +S+N++I GY+ G +A+
Sbjct: 41 LCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAW 100
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACS---HAGLANQGLDL-FKCMVEDFAIEPLAEHYSC 617
F +M +P+Q T G+LS S AG GL L + + D + +C
Sbjct: 101 GVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVG------TC 154
Query: 618 LVDLLGRMGRLEEAFNVVRGMDVKA 642
L+ L GR+ LE A V M K+
Sbjct: 155 LLCLYGRLDLLEMAEQVFEDMPFKS 179
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 183/707 (25%), Positives = 312/707 (44%), Gaps = 95/707 (13%)
Query: 24 HKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRV-FSNTIHKNLVTYNSMISVFAKNGK 82
HK IG+ G K +QI+ + G V +AV V F++ + Y + +
Sbjct: 20 HKRVIGT-GTK--LTVTRQILEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKAL 76
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRK 142
+ AR++ Q +LV+++ + +L N +E Y +
Sbjct: 77 VVQARKV-----QSHLVTFSPLPPIFLLNRAIEA----------------------YGKC 109
Query: 143 GKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGY 202
G ++ AREL E +P++ D WNAVI A+ G + ++F M + + + AG
Sbjct: 110 GCVDDARELFEEMPER-DGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGV 168
Query: 203 TQNGKMGLALHFFEKMA--------EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNA 254
++ + L L ++ NV +V + +S AR++F++I NP+
Sbjct: 169 LKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSD 228
Query: 255 VSWVTMLCGFARHGKITEARRLFDSM------PCKNVVSWNAMIAAYAQDLQIDE----- 303
VSW ++ + G EA +F M P + VS + + + L++ +
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI 288
Query: 304 AVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV 363
AVKL + D V T++ + Y++ +L+ AR V++Q KD+ + T+ MSG +G
Sbjct: 289 AVKLSVV---ADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 364 DEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD------------------------ 399
EA ++F+ + R+ + WN+M+ G+ + DEALD
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVC 405
Query: 400 ---------------LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE-RNIVSW 443
++R N + N ++ Y + G + SA F+ M E R+ VSW
Sbjct: 406 SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSW 465
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
N+L+TG + AL M E K P + T +G +H ++++
Sbjct: 466 NALLTGVARVGRSEQALSFFEGMQVEAK-PSKYTLATLLAGCANIPALNLGKAIHGFLIR 524
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKA 563
GY D+ + A++ MY+KC + A +VF DLI WNS+I G NG + E F+
Sbjct: 525 DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Query: 564 FKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
F + +E V PD VTF+G+L AC G G F M + I P EHY C+++L
Sbjct: 585 FMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYC 644
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRL 670
+ G L + + M + + AC+ ++ ++G +AA RL
Sbjct: 645 KYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 209/413 (50%), Gaps = 39/413 (9%)
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
DI + +L+ G A K+F ++ RD + W +I GF ++G EALD F +M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 406 --------------------------------KKNSV----SWNTMISGYAQAGQMDSAE 429
K+ S+ + N +I Y + Q+ A
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 430 NIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLM-GREGKKPDQSTFXXXXXXXXXX 488
+F +E+++ VSWNS+I+G + +A+ LM G KPD
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL 319
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLI 548
G +HEYIL +G D + A++ MYAKCG +E+A ++F I ++ +WN+L+
Sbjct: 320 GAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALL 379
Query: 549 SGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM-VEDFA 607
G A++G+ +E+ + F++M+ P+ VTF+ L+AC H GL ++G F M ++
Sbjct: 380 GGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYN 439
Query: 608 IEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNL-EIGEFA 666
+ P EHY C++DLL R G L+EA +V+ M VK + + G++L AC+ L E+ +
Sbjct: 440 LFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEI 499
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIE 719
++E ++ Y+ LSN+ A RW++V R+R LM+ K K+PG S+IE
Sbjct: 500 LDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 163/367 (44%), Gaps = 48/367 (13%)
Query: 64 HKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDV 123
+ ++ NS++ + G+ +A ++F +M R++VSW +I G+ + +EA F
Sbjct: 138 YDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSK 197
Query: 124 MPERDNF-SWALMITCYTRKGKLEKARELLELVPDK-----LDTACWNAVIAGYAKKGQF 177
M N ++ ++ R G L + + L+ + L+T NA+I Y K Q
Sbjct: 198 MDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG--NALIDMYVKCEQL 255
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS-----WNLMVSG 232
SDA +VF + KD VS+NSM++G + A+ F M + + ++S
Sbjct: 256 SDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSA 315
Query: 233 FVNSGDLSSARQLFEKIPNPNAVSWVTMLCG-----FARHGKITEARRLFDSMPCKNVVS 287
+ G + R + E I + W T + +A+ G I A +F+ + KNV +
Sbjct: 316 CASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFT 374
Query: 288 WNAMIAAYAQDLQIDEAVKLF---IKMPHKDG-VSWTTIINGYIRVGKLDEAREVYNQMP 343
WNA++ A E+++ F +K+ K V++ +N G +DE R +++M
Sbjct: 375 WNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMK 434
Query: 344 CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQ 403
++ +F +L + MI C++G +DEAL+L +
Sbjct: 435 SREY--------------------NLFPKLEH-----YGCMIDLLCRAGLLDEALELVKA 469
Query: 404 MPKKNSV 410
MP K V
Sbjct: 470 MPVKPDV 476
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 142/299 (47%), Gaps = 22/299 (7%)
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM- 218
D N+++ Y G+ +A KVF MPV+D+VS+ ++ G+T+ G AL F KM
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 219 AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG------FARHGKITE 272
E N+ ++ ++ G LS + + I S +++ G + + ++++
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLI--LKRASLISLETGNALIDMYVKCEQLSD 257
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-----WTTIINGYI 327
A R+F + K+ VSWN+MI+ + EA+ LF M G+ T++++
Sbjct: 258 AMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACA 317
Query: 328 RVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNS 383
+G +D R V+ + I +T + + ++ + G ++ A ++FN + +++ WN+
Sbjct: 318 SLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNA 377
Query: 384 MIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
++ G G E+L F +M K N V++ ++ G +D F M+ R
Sbjct: 378 LLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSR 436
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 138/312 (44%), Gaps = 61/312 (19%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
+L T N++I ++ K ++SDA ++F ++ +++ VSWN+MI+G +H +EA LF +M
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ 297
Query: 126 -----ERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQF 177
+ D +++ G ++ R + E + K DT A++ YAK G
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYI 357
Query: 178 SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSG 237
A ++FN + K++ ++N++L G +G +L +FE+M + GF
Sbjct: 358 ETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL----------GF---- 403
Query: 238 DLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
PN V+++ L G + E RR F M + +N
Sbjct: 404 -------------KPNLVTFLAALNACCHTGLVDEGRRYFHKMKSRE---YN-------- 439
Query: 298 DLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMSG 356
LF K+ H + +I+ R G LDEA E+ MP K D+ A++S
Sbjct: 440 ---------LFPKLEH-----YGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 357 LIQTGRVDEASK 368
G + E K
Sbjct: 486 CKNRGTLMELPK 497
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 24/266 (9%)
Query: 442 SWNSLITGFL---QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
S+N+L++ + + + A K+ V G PD TF + G Q+H
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFV---SNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
+ K G+ +D++V N+L+ Y CG +A +VF + D++SW +I+G+ G
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
EA F +M +V P+ T++ +L + G + G + +++ ++ L E + L
Sbjct: 190 EALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISL-ETGNAL 245
Query: 619 VDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACRVHKNLE-IGEFAAMRLSE-LEP 675
+D+ + +L +A V ++ K W S++ G ++ E I F+ M+ S ++P
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVS-WNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 676 HNASNYITLSNMHAEA-------GRW 694
+I S + A A GRW
Sbjct: 305 ---DGHILTSVLSACASLGAVDHGRW 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K G +E A+ +F+ KN+ T+N+++ A +G ++ + F++M + NLV++
Sbjct: 352 AKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFL 411
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERD-NF-----SWALMITCYTRKGKLEKARELLELVP 156
+ H +V+E + F M R+ N + MI R G L++A EL++ +P
Sbjct: 412 AALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP 471
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEK 182
K D A+++ +G + K
Sbjct: 472 VKPDVRICGAILSACKNRGTLMELPK 497
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 195/336 (58%), Gaps = 4/336 (1%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV-LMGREGK 471
N +I + G+ A+ + + ++N+++WN +I G+++N Y +ALK+L ++
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQ 531
KP++ +F +H ++ SG + +S+AL+ +YAKCG + ++ +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGL 591
VF +++ D+ WN++I+G+A +G A EA + F +M +E V PD +TF+G+L+ CSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 592 ANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+G + F M F+I+P EHY +VDLLGR GR++EA+ ++ M ++ + +W SLL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 652 GACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGK 711
+ R +KN E+GE A LS+ + + +Y+ LSN+++ +WE +++R LM + K
Sbjct: 342 SSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 712 LPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILNAI 747
G SW+E I F + D+ + + I +L +
Sbjct: 399 AKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGL 434
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 22/244 (9%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-------DV 123
N +I K G+ A+++ S +N+++WN MI GY+ N EEA K D+
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 124 MPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDA 180
P + FS+A + R G L A+ + L+ D +L+ +A++ YAK G +
Sbjct: 162 KPNK--FSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS---- 236
+VF + D+ +N+M+ G+ +G A+ F +M ++V ++ G + +
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 237 GDLSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNA 290
G L ++ F + P + M+ R G++ EA L +SMP + +VV W +
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 291 MIAA 294
++++
Sbjct: 340 LLSS 343
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 117/241 (48%), Gaps = 19/241 (7%)
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN---- 251
N ++ + G+ GLA +++NV++WNLM+ G+V + A + + + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 252 -PNAVSWVTMLCGFARHGKITEAR----RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
PN S+ + L AR G + A+ + DS N + +A++ YA+ I + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 307 LFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT----GR 362
+F + D W +I G+ G EA V+++M + ++ ++ GL+ T G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 363 VDEASKMFNQLSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMI 416
++E + F +S R +I + +M+ ++GR+ EA +L MP + + V W +++
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 417 S 417
S
Sbjct: 342 S 342
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 139/326 (42%), Gaps = 51/326 (15%)
Query: 134 LMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVF-NLMPVKDL 192
L+I + G+ A+++L D+ + WN +I GY + Q+ +A K N++ D+
Sbjct: 103 LIIESLMKIGESGLAKKVLRNASDQ-NVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 193 ----VSYNSMLAGYTQNGKMGLA--LH--FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQ 244
S+ S LA + G + A +H + E N + + +V + GD+ ++R+
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEA 304
+F + + W M+ GFA HG TEA R+F M ++V
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHV------------------- 262
Query: 305 VKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK-----DIAAETALMSGLIQ 359
D +++ ++ G L+E +E + M + + A++ L +
Sbjct: 263 --------SPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGR 314
Query: 360 TGRVDEASKMFNQLSTR-DTICWNSMIAGFCQSGRMDEALDL----FRQMPKKNSVSWNT 414
GRV EA ++ + D + W S+++ S R + +L + + K S +
Sbjct: 315 AGRVKEAYELIESMPIEPDVVIWRSLLS----SSRTYKNPELGEIAIQNLSKAKSGDYVL 370
Query: 415 MISGYAQAGQMDSAENIFQAMEERNI 440
+ + Y+ + +SA+ + + M + I
Sbjct: 371 LSNIYSSTKKWESAQKVRELMSKEGI 396
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 118/252 (46%), Gaps = 33/252 (13%)
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
V + NL++ + G+ A+++ + N ++W M+ G+ R+ + EA + +M
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 283 -----KNVVSWNAMIAAYAQ-----------DLQIDEAVKLFIKMPHKDGVSWTTIINGY 326
N S+ + +AA A+ L ID ++L + + + +++ Y
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL-------NAILSSALVDVY 210
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS----TRDTICWN 382
+ G + +REV+ + D++ A+++G G EA ++F+++ + D+I +
Sbjct: 211 AKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFL 270
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENIFQAME- 436
++ G ++E + F M ++ S+ + M+ +AG++ A + ++M
Sbjct: 271 GLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPI 330
Query: 437 ERNIVSWNSLIT 448
E ++V W SL++
Sbjct: 331 EPDVVIWRSLLS 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 42/239 (17%)
Query: 353 LMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM-------P 405
++ L++ G A K+ S ++ I WN MI G+ ++ + +EAL + M P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 406 KK---------------------------------NSVSWNTMISGYAQAGQMDSAENIF 432
K N++ + ++ YA+ G + ++ +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 433 QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQ 492
+++ ++ WN++ITGF + L +A++ M E PD TF +
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 493 VGNQLHEYILKSGYIN-DLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLIS 549
G + + + I L A++ + + GRV+ A ++ ++ D++ W SL+S
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 47 GKLGKVEEAVRVFS----NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
+LG + A V S + I N + ++++ V+AK G I +R++F + + ++ WN
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK 158
MI G+ + + EA ++F M D+ ++ ++T + G LE+ +E L+ +
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 159 LDTAC----WNAVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLA 200
+ A++ + G+ +A ++ MP++ D+V + S+L+
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 187/347 (53%), Gaps = 5/347 (1%)
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
D N++I + +D AL LF + P+++ V++N +I G +A ++ A +F +M
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 437 ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQ 496
R++VSWNSLI+G+ Q + +A+K M G KPD Q G
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
+H+Y + D F++ L+ YAKCG +++A ++F L +WN++I+G A++G
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
F++M+S + PD VTFI +L CSH+GL ++ +LF M + + +HY
Sbjct: 331 GELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYG 390
Query: 617 CLVDLLGRMGRLEEAFNVVRGMDV----KANAGLWGSLLGACRVHKNLEIGEFAAMRLSE 672
C+ DLLGR G +EEA ++ M + W LLG CR+H N+EI E AA R+
Sbjct: 391 CMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKA 450
Query: 673 LEPHNASNYITLSNMHAEAGRWEEVERLR-VLMRDKRAGKLPGCSWI 718
L P + Y + M+A A RWEEV ++R ++ RDK+ K G S +
Sbjct: 451 LSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 150/325 (46%), Gaps = 46/325 (14%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
+F N I + ++ A+++F +++VTYN +I K +I AR+LFD M
Sbjct: 152 LFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPL 211
Query: 96 RNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLEKAREL 151
R+LVSWN++I+GY + EA KLFD M + DN + ++ + G +K + +
Sbjct: 212 RDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAI 271
Query: 152 LELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
+ K +D+ ++ YAK G A ++F L K L ++N+M+ G +G
Sbjct: 272 HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNG 331
Query: 209 GLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHG 268
L + +F KM + P+ V+++++L G + G
Sbjct: 332 ELTVDYFRKMVSSGI---------------------------KPDGVTFISVLVGCSHSG 364
Query: 269 KITEARRLFDSMPC-----KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDG------V 317
+ EAR LFD M + + + M + I+EA ++ +MP KDG +
Sbjct: 365 LVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMP-KDGGNREKLL 423
Query: 318 SWTTIINGYIRVGKLDEAREVYNQM 342
+W+ ++ G G ++ A + N++
Sbjct: 424 AWSGLLGGCRIHGNIEIAEKAANRV 448
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 35/256 (13%)
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
+ DL + N+++ Y+ + AL F++ +++VV++N+++ G V + ++ AR+LF+
Sbjct: 149 LSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDS 208
Query: 249 IPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF 308
+P + VSW +++ G+A+ EA +LFD M V L
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEM------------------------VALG 244
Query: 309 IKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVD 364
+K D V+ + ++ + G + + +++ K + ++ L +GL+ + G +D
Sbjct: 245 LK---PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYA 420
A ++F S + WN+MI G G + +D FR+M K + V++ +++ G +
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 421 QAGQMDSAENIFQAME 436
+G +D A N+F M
Sbjct: 362 HSGLVDEARNLFDQMR 377
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 156/383 (40%), Gaps = 69/383 (18%)
Query: 386 AGFCQSGRMDEALDLFRQMPKKNSVSWN-----TMISGYAQAGQ--MDSAENIFQAMEER 438
A F SGR+ K+NSV N T IS A A + + A ++F+ +
Sbjct: 25 AQFITSGRISNDF-------KQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNP 77
Query: 439 NIVSWNSLI-TGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVG--N 495
+ +N++I L + + V M R PD TF +
Sbjct: 78 STFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVK 137
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-------------------TAI 536
LH L+ G ++DLF N LI +Y+ ++SA Q+F A
Sbjct: 138 TLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAR 197
Query: 537 ECV------------DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
E V DL+SWNSLISGYA + EA K F +M++ + PD V + LS
Sbjct: 198 EIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLS 257
Query: 585 ACSHAGLANQGLDLF------KCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
AC+ +G +G + + ++ F LA + LVD + G ++ A +
Sbjct: 258 ACAQSGDWQKGKAIHDYTKRKRLFIDSF----LA---TGLVDFYAKCGFIDTAMEIFELC 310
Query: 639 DVKANAGLWGSLLGACRVHKN--LEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
K W +++ +H N L + F M S ++P + +I++ + +G +E
Sbjct: 311 SDK-TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKP-DGVTFISVLVGCSHSGLVDE 368
Query: 697 V----ERLRVLMRDKRAGKLPGC 715
+++R L R K GC
Sbjct: 369 ARNLFDQMRSLYDVNREMKHYGC 391
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 219 bits (557), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 141/434 (32%), Positives = 213/434 (49%), Gaps = 57/434 (13%)
Query: 363 VDEASKMFNQLSTRDTICWNSMIAGFCQS-GRMDEALDLFRQM-------PKKNSVSW-- 412
V+ A ++F+ + + WN++I R +EA L+R+M P K++ +
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 413 -------------------------------NTMISGYAQAGQMDSAENIFQAMEERNIV 441
N +I Y G +D A +F M ER++V
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 218
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
SWNS+I ++ Y AL+ M R + PD T +G H ++
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 502 LKSGYIN---DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
L+ ++ D+ V N+LI MY KCG + AEQVF ++ DL SWN++I G+A +G A
Sbjct: 278 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAE 337
Query: 559 EAFKAFKQMLS--EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
EA F +M+ E V P+ VTF+G+L AC+H G N+G F MV D+ IEP EHY
Sbjct: 338 EAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG 397
Query: 617 CLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA-CRVHKNLEIGEFAAMRLSELEP 675
C+VDL+ R G + EA ++V M +K +A +W SLL A C+ ++E+ E A + +
Sbjct: 398 CIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKE 457
Query: 676 HNASN-------YITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFL 728
N S+ Y+ LS ++A A RW +V +R LM + K PGCS IE+ F
Sbjct: 458 DNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFF 517
Query: 729 SDDSGRLRPETIQI 742
+ D+ P+T QI
Sbjct: 518 AGDTS--HPQTKQI 529
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 40/282 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP---ER 127
N +I ++ G + AR++FD+M +R+LVSWN+MI + + A +LF M E
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP 249
Query: 128 DNFSWALMITCYTRKGKLEK---ARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAE 181
D ++ +++ G L A L D +D N++I Y K G AE
Sbjct: 250 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 309
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSS 241
+VF M +DL S+N+M+ G+ +G+ A++FF++M +K
Sbjct: 310 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR------------------- 350
Query: 242 ARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-----WNAMIAAYA 296
E + PN+V++V +L G + + R+ FD M + + ++ A
Sbjct: 351 -----ENV-RPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA 404
Query: 297 QDLQIDEAVKLFIKMPHK-DGVSWTTIINGYIRVGKLDEARE 337
+ I EA+ + + MP K D V W ++++ + G E E
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 157/363 (43%), Gaps = 41/363 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN-SMVEEASKLFDVM 124
L Y ++ + + ++ A ++FD + + WNT+I H+ S EEA L+ M
Sbjct: 82 TLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKM 141
Query: 125 -------PERDNFSWALMITCYTRKGKLEKARELLELVPDKL--DTACWNAVIAGYAKKG 175
P++ F + L Y G E + ++V D N +I Y G
Sbjct: 142 LERGESSPDKHTFPFVLKACAYIF-GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 200
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA---EKNVVSWNLMVSG 232
A KVF+ MP + LVS+NSM+ + G+ AL F +M E + + ++S
Sbjct: 201 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSA 260
Query: 233 FVNSGDLS----SARQLFEKIPNPNAV------SWVTMLCGFARHGKITEARRLFDSMPC 282
G LS + L K A+ S + M C + G + A ++F M
Sbjct: 261 CAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYC---KCGSLRMAEQVFQGMQK 317
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK------DGVSWTTIINGYIRVGKLDEAR 336
+++ SWNAMI +A + +EA+ F +M K + V++ ++ G +++ R
Sbjct: 318 RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 377
Query: 337 EVYNQMPCKDIAAETAL------MSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIAGFC 389
+ ++ M +D E AL + + + G + EA M + + D + W S++ C
Sbjct: 378 QYFDMM-VRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACC 436
Query: 390 QSG 392
+ G
Sbjct: 437 KKG 439
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 128/310 (41%), Gaps = 66/310 (21%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH---KDGVSWTTIIN 324
G + AR++FD MP +++VSWN+MI A + + D A++LF +M DG + ++++
Sbjct: 200 GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLS 259
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
+G L + T + L++ VD A D + NS+
Sbjct: 260 ACAGLGSL---------------SLGTWAHAFLLRKCDVDVA---------MDVLVKNSL 295
Query: 385 IAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
I +C+ G + A +F+ M K++ SWN MI G+A G+ + A N F M ++
Sbjct: 296 IEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK------ 349
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS 504
RE +P+ TF G Q + +++
Sbjct: 350 -----------------------RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 505 GYIND-LFVSNALIAMYAKCGRV-ESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
I L ++ + A+ G + E+ + V + D + W SL+ G ++E
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE--- 443
Query: 563 AFKQMLSEEV 572
LSEE+
Sbjct: 444 -----LSEEI 448
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
V KN I K G + A +VF ++L ++N+MI FA +G+ +A FD+M
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 96 R------NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWAL-----MITCYTRKGK 144
+ N V++ ++ H V + + FD+M AL ++ R G
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGY 408
Query: 145 LEKARELLELVPDKLDTACWNAVIAGYAKKG 175
+ +A +++ +P K D W +++ KKG
Sbjct: 409 ITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/544 (26%), Positives = 260/544 (47%), Gaps = 47/544 (8%)
Query: 233 FVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
+ SG + +A QLF+ IP+ N ++W L G ++G + A LFD MP ++VVSWN MI
Sbjct: 49 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 108
Query: 293 AAYAQDLQIDEAVKLFIKM------PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKD 346
+ + +++F M P + S + +R G+ + + + +
Sbjct: 109 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN 168
Query: 347 IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF---RQ 403
+ ++M + G D A +F + RD + WN +I SG + ALD F R+
Sbjct: 169 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 228
Query: 404 M---PKKNSVSW----------------------------NTMISG-----YAQAGQMDS 427
M P + +VS N+++ G +++ ++D
Sbjct: 229 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 288
Query: 428 AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
+ +F+ +E+ + V NS+I + + DAL+ +L + +PD+ TF
Sbjct: 289 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSL 547
G +H ++K G+ D V+ +L+ MY K G V+ A VF + DLI WN++
Sbjct: 349 VMLDH-GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 407
Query: 548 ISGYALNGYAIEAFKAFKQML-SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF 606
I G A N A+E+ F Q+L ++ + PD+VT +G+L AC +AG N+G+ +F M +
Sbjct: 408 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAH 467
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFA 666
+ P EHY+C+++LL R+G + EA ++ + + ++ +W +L A + + E
Sbjct: 468 GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV 527
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQC 726
A + E EP ++ Y+ L ++ RWE +LR M + + G S I +++ +
Sbjct: 528 AKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFS 587
Query: 727 FLSD 730
F +D
Sbjct: 588 FEAD 591
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 206/418 (49%), Gaps = 31/418 (7%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G V A+++F + KN +T+N + KNG +++A LFD+M +R++VSWNTMI+G
Sbjct: 51 KSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISG 110
Query: 108 YLHNSMVEEASKLF------DVMPERDNFS-WALMITCYTRKGKLEKARELLELVPDKLD 160
+ E ++F ++ P FS A ++TC R G+ + V + +
Sbjct: 111 LVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTC-VRHGEQIHGNAICSGV-SRYN 168
Query: 161 TACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE 220
WN+V+ Y + G F A VF M +D+VS+N ++ + +G +AL F M E
Sbjct: 169 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 228
Query: 221 KNV----VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCG----FARHGKITE 272
+ + +++VS + +LS +Q +S +L F++ ++ +
Sbjct: 229 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 288
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI----KMPHKDGVSWTTIINGYIR 328
+ +LF + + V N+MI +Y+ ++A++LFI + D +++++++
Sbjct: 289 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
Query: 329 VGKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
V LD +V++ + D A T+LM +TG VD A +F + +D I WN++
Sbjct: 349 V-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 407
Query: 385 IAGFCQSGRMDEALDLFRQM-----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
I G ++ R E+L +F Q+ K + V+ ++ AG ++ IF +ME+
Sbjct: 408 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEK 465
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 139/285 (48%), Gaps = 8/285 (2%)
Query: 375 TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQA 434
R T N + + +SG + AL LF +P KN+++WN + G + G +++A ++F
Sbjct: 36 VRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDE 95
Query: 435 MEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVG 494
M ER++VSWN++I+G + + ++ M R +P + TF + G
Sbjct: 96 MPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF---SILASLVTCVRHG 152
Query: 495 NQLHEYILKSGYIN-DLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
Q+H + SG +L V N+++ MY + G + A VF +E D++SWN LI +
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSD 212
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLD-LFKCMVEDFAIEPLA 612
+G A F M E+ PD+ T ++S CS ++G L C+ F +
Sbjct: 213 SGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV 272
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH 657
+D+ + RL+++ + R ++ K ++ L S++G+ H
Sbjct: 273 --LGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWH 314
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 39/213 (18%)
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGY 556
+H +L++G++ + N + +Y K G V +A Q+F I + I+WN + G NGY
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM------VEDFAIEP 610
A F +M +VV G++S G G+ +F M +F
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVS----CGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 611 LAEHYSC--------------------------LVDLLGRMGRLEEAFNVVRGMDVKANA 644
LA +C ++D+ R+G + A +V M+ + +
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR-DV 200
Query: 645 GLWGSLLGACRVHKNLEIG--EFAAMRLSELEP 675
W L+ +C N E+ +F MR E++P
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQP 233
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 243/485 (50%), Gaps = 33/485 (6%)
Query: 238 DLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIA 293
D+ A +FE + N N + TM+ G++ + A +F+ + K + S+ +
Sbjct: 74 DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLK 133
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWT----TIINGYIRVGKLDEAREVYNQMP-CKDIA 348
+ +++L + L + +T +I+ Y GK+ +AR+V+++MP D
Sbjct: 134 SCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAV 193
Query: 349 AETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS----GRMDEA------- 397
+ LM+G +Q + A +F + + + S + F + G + A
Sbjct: 194 TFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLC 253
Query: 398 ----LDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN 453
LDL + +I Y + G + SA IF +++V+WN +I + +
Sbjct: 254 IKIGLDLDLHL-------ITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKT 306
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
L + + L M E KP+ STF VG + + + + D +
Sbjct: 307 GLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILG 366
Query: 514 NALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE--E 571
AL+ MYAK G +E A ++F ++ D+ SW ++ISGY +G A EA F +M E +
Sbjct: 367 TALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCK 426
Query: 572 VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA 631
V P+++TF+ +L+ACSH GL +G+ FK MVE ++ P EHY C+VDLLGR G+LEEA
Sbjct: 427 VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Query: 632 FNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEA 691
+ ++R + + +++ W +LL ACRV+ N ++GE MRL+E+ + ++ I L+ HA A
Sbjct: 487 YELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVA 546
Query: 692 GRWEE 696
G E+
Sbjct: 547 GNPEK 551
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 177/361 (49%), Gaps = 24/361 (6%)
Query: 72 SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER---- 127
S + F+ I A +F+ +S NL +NTMI GY + E A +F+ + +
Sbjct: 64 SKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTL 123
Query: 128 DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVF 184
D FS+ + +R+ + L + + T NA+I Y G+ SDA KVF
Sbjct: 124 DRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVF 183
Query: 185 NLMPVK-DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDL 239
+ MP D V++++++ GY Q K LAL F M + VV + +S + GDL
Sbjct: 184 DEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDL 243
Query: 240 S---SARQLFEKIPNPNAVSWVTMLCG-FARHGKITEARRLFDSMPCKNVVSWNAMIAAY 295
S SA L KI + +T L G + + G I+ ARR+FD K+VV+WN MI Y
Sbjct: 244 SGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQY 303
Query: 296 AQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEA----REVYNQMPCKDIAAET 351
A+ ++E V L +M ++ ++ G + EA R V + + + IA +
Sbjct: 304 AKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDA 363
Query: 352 ALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK 407
L + L+ + G +++A ++FN++ +D W +MI+G+ G EA+ LF +M ++
Sbjct: 364 ILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEE 423
Query: 408 N 408
N
Sbjct: 424 N 424
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 185/392 (47%), Gaps = 53/392 (13%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQR-NLVSWNTMIAGYLHNSMVEEASKLFDVMPERD- 128
N++I + GKISDAR++FD+M Q + V+++T++ GYL S A LF +M + +
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 129 --NFSWAL-MITCYTRKGKL---EKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEK 182
N S L ++ + G L E A L + LD A+I Y K G S A +
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
+F+ KD+V++N M+ Y + G + E+ V W L
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTG-----------LLEECV--WLL-------------- 316
Query: 243 RQL-FEKIPNPNAVSWVTML--CGFARHGKI--TEARRLFDSMPCKNVVSWNAMIAAYAQ 297
RQ+ +EK+ PN+ ++V +L C ++ + T A L + + + A++ YA+
Sbjct: 317 RQMKYEKM-KPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAK 375
Query: 298 DLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMP---CKDIAAETA-- 352
+++AV++F +M KD SWT +I+GY G EA ++N+M CK E
Sbjct: 376 VGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFL 435
Query: 353 -LMSGLIQTGRVDEASKMFNQLS-----TRDTICWNSMIAGFCQSGRMDEALDLFRQMP- 405
+++ G V E + F ++ T + ++ ++G+++EA +L R +P
Sbjct: 436 VVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPI 495
Query: 406 KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
+S +W +++ G D E++ + E
Sbjct: 496 TSDSTAWRALLAACRVYGNADLGESVMMRLAE 527
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 20/272 (7%)
Query: 43 IIHLGKLGKVEEA-VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
I LG L E A V + +L ++I ++ K G IS AR++FD ++++V+W
Sbjct: 237 ISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTW 296
Query: 102 NTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCYTRKGKLEKA-RELLEL 154
N MI Y ++EE L M P F L Y+ + + +LLE
Sbjct: 297 NCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE 356
Query: 155 VPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
LD A++ YAK G A ++FN M KD+ S+ +M++GY +G A+
Sbjct: 357 ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTL 416
Query: 215 FEKMAEKNV------VSWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTMLCG 263
F KM E+N +++ ++++ + G + + F+++ P + ++
Sbjct: 417 FNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDL 476
Query: 264 FARHGKITEARRLFDSMP-CKNVVSWNAMIAA 294
R G++ EA L ++P + +W A++AA
Sbjct: 477 LGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL------VS 100
K+G +E+AV +F+ K++ ++ +MIS + +G +A LF+KM + N ++
Sbjct: 374 AKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEIT 433
Query: 101 WNTMIAGYLHNSMVEEASKLFDVMPERDNFS-----WALMITCYTRKGKLEKARELLELV 155
+ ++ H +V E + F M E +F+ + ++ R G+LE+A EL+ +
Sbjct: 434 FLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNL 493
Query: 156 PDKLDTACWNAVIAGYAKKGQFSDAEKV 183
P D+ W A++A G E V
Sbjct: 494 PITSDSTAWRALLAACRVYGNADLGESV 521
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 15/216 (6%)
Query: 495 NQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALN 554
+++H Y++K+G D F + L+A ++ + A +F + +L +N++I GY+++
Sbjct: 45 SRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSIS 103
Query: 555 GYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHA-----GLANQGLDLFKCMVEDFAIE 609
AF F Q+ ++ + D+ +FI L +CS G G+ L + +
Sbjct: 104 DEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLR 163
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL-GACRVHKN-LEIGEFAA 667
H+ C+ G++ +A V M +A + +L+ G +V K L + F
Sbjct: 164 NALIHFYCVC------GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRI 217
Query: 668 MRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
MR SE+ N S ++ + ++ G E VL
Sbjct: 218 MRKSEVVV-NVSTLLSFLSAISDLGDLSGAESAHVL 252
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 189/346 (54%), Gaps = 13/346 (3%)
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
+++ + G M +A +F +MP++N V+WN MI+G G + A + M R +V
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 442 SWNSLITGFLQNSLYFDALKSLVLM-----GREGKKPDQSTFXXXXXXXXXXXXXQVGNQ 496
SW ++I G+ + D K +L+ + KP++ T ++
Sbjct: 222 SWTTIIDGYAR----VDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 497 LHEYILKSGYIN-DLFVSNALIAMYAKCGRVESAEQVFTAIEC--VDLISWNSLISGYAL 553
+H Y+ K G++ D+ V+N+LI YAKCG ++SA + F I +L+SW ++IS +A+
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQG-LDLFKCMVEDFAIEPLA 612
+G EA FK M + P++VT I +L+ACSH GLA + L+ F MV ++ I P
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 397
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSE 672
+HY CLVD+L R GRLEEA + + ++ A +W LLGAC V+ + E+ E +L E
Sbjct: 398 KHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 457
Query: 673 LEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWI 718
LE + +Y+ +SN+ GR+ + +R R M + KLPG S +
Sbjct: 458 LERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 140/302 (46%), Gaps = 35/302 (11%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
A++ Y G DA KVF+ MP ++ V++N M+ G T G AL F EKM + VV
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIP-----NPNAVSWVTML-----------CGFARHG 268
SW ++ G+ A LF ++ PN ++ + +L CG + H
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCG-SVHA 280
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH--KDGVSWTTIINGY 326
+ +R F +PC V+ N++I AYA+ I A K FI++P+ K+ VSWTT+I+ +
Sbjct: 281 YV--GKRGF--VPCDIRVT-NSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAF 335
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALM---------SGLIQTGRVDEASKMFNQLS-TR 376
G EA ++ M + M GL + ++ + M N+ T
Sbjct: 336 AIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITP 395
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
D + ++ + GR++EA + ++P ++ +V W ++ + + AE + + +
Sbjct: 396 DVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKL 455
Query: 436 EE 437
E
Sbjct: 456 ME 457
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 150/343 (43%), Gaps = 49/343 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
+++ ++ G + DA ++FD+M +RN V+WN MI G + E+A + MP R
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 131 SWALMITCYTRKGKLEKARELLE-------LVPDKLD-----TACWN--------AVIAG 170
SW +I Y R K ++A L + P+++ A WN +V A
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM--AEKNVVSWNL 228
K+G +P D+ NS++ Y + G + A FF ++ KN+VSW
Sbjct: 282 VGKRG----------FVPC-DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 229 MVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRL--FDSMP- 281
M+S F G A +F+ + PN V+ +++L HG + E L F++M
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNA-CSHGGLAEEEFLEFFNTMVN 389
Query: 282 ----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP-HKDGVSWTTIINGYIRVGKLDEAR 336
+V + ++ + +++EA K+ +++P + V W ++ + A
Sbjct: 390 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAE 449
Query: 337 EVYNQM--PCKDIAAETALMSGLI-QTGRVDEASKMFNQLSTR 376
V ++ + + LMS + TGR +A + Q+ R
Sbjct: 450 RVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVR 492
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDS 279
E +V +V ++ G++ A ++F+++P N V+W M+ G G +A +
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDG-----VSWTTIINGYIRVGKLDE 334
MP + VVSW +I YA+ + EA+ LF +M D ++ I+ +G L
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 335 AREVYNQ------MPCKDIAAETALMSGLIQTGRVDEASKMFNQLST--RDTICWNSMIA 386
V+ +PC DI +L+ + G + A K F ++ ++ + W +MI+
Sbjct: 275 CGSVHAYVGKRGFVPC-DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMIS 333
Query: 387 GFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAG 423
F G EA+ +F+ M K N V+ ++++ + G
Sbjct: 334 AFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG 374
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 257/513 (50%), Gaps = 60/513 (11%)
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PH 313
+ + C F R+ T A LFD +P +++ S N+ ++++ + ++ + LF+++ P
Sbjct: 23 LVLRCVFIRNFA-THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPD 81
Query: 314 KDGVSWTTIINGYIRVGKLDEAREVY----NQMPCKDIAAETALMSGLIQTGRVDEASKM 369
++T ++ + + R+V+ Q ++TAL+ + G + ++ ++
Sbjct: 82 LSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRV 141
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS-------------------- 409
F + +D + WN++++GF ++G+ EAL +F M ++
Sbjct: 142 FESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKIL 201
Query: 410 ------------------VSWNTMISGYAQAGQMDSAENIFQAME-ERNIVSWNSLITGF 450
V MIS Y+ G ++ A ++ ++ + V NSLI+G
Sbjct: 202 QQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDL 510
++N Y +A +LM R+ +P+ +G Q+H L++G+++D
Sbjct: 262 IRNRNYKEAF---LLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDS 316
Query: 511 FVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+ N L+ MY KCG++ A +F AI ++SW S+I YA+NG ++A + F++M E
Sbjct: 317 KLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEE 376
Query: 571 --EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL 628
V+P+ VTF+ ++SAC+HAGL +G + F M E + + P EHY C +D+L + G
Sbjct: 377 GSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGET 436
Query: 629 EEAFNVVRGMDVKAN----AGLWGSLLGACRVHKNLEIGEFAAMRL-SELEPHNASNYIT 683
EE + +V M N +W ++L AC ++ +L GE+ A RL E P NAS Y+
Sbjct: 437 EEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVL 496
Query: 684 LSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
+SN +A G+W+ VE LR +++K K G S
Sbjct: 497 VSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 154/294 (52%), Gaps = 22/294 (7%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM--- 124
++ ++I +++K G + D+ ++F+ + +++LVSWN +++G+L N +EA +F M
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 125 -PERDNFSWALMI-TCYTRKGKLEKAREL--LELVPDKLDTACWNAVIAGYAKKGQFSDA 180
E F+ + ++ TC + K L++ +++ + +V + A+I+ Y+ G ++A
Sbjct: 180 RVEISEFTLSSVVKTCASLK-ILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEA 238
Query: 181 EKVFNLMPV-KDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
KV+N + V D V NS+++G +N A + NV + ++G ++ DL
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-RPNVRVLSSSLAGCSDNSDL 297
Query: 240 SSARQLFEKIPNPNAVSWVTMLCG-----FARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
+Q+ + N + LC + + G+I +AR +F ++P K+VVSW +MI A
Sbjct: 298 WIGKQI-HCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDA 356
Query: 295 YAQDLQIDEAVKLFIKMPHK------DGVSWTTIINGYIRVGKLDEAREVYNQM 342
YA + +A+++F +M + + V++ +I+ G + E +E + M
Sbjct: 357 YAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMM 410
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 186/411 (45%), Gaps = 73/411 (17%)
Query: 76 VFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFS 131
VF +N + A LFD++ QR+L S N+ ++ +L + + LF P+ + +
Sbjct: 28 VFIRNFA-THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHT 86
Query: 132 WALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMP 188
+ ++ + E R++ L+ + T A+I Y+K G D+ +VF +
Sbjct: 87 FTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVE 146
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
KDLVS+N++L+G+ +NGK AL F M + V +S V + ++ ++ ++
Sbjct: 147 EKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKT---CASLKILQQ 203
Query: 249 IPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLF 308
+A+ VT R L VV AMI+ Y+ I+EA+K++
Sbjct: 204 GKQVHAMVVVT-------------GRDL--------VVLGTAMISFYSSVGLINEAMKVY 242
Query: 309 IKM-PHKDGVSWTTIINGYIRVGKLDEAREVYN-QMP-----------CKD--------- 346
+ H D V ++I+G IR EA + + Q P C D
Sbjct: 243 NSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQ 302
Query: 347 ---------IAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
+++ L +GL+ + G++ +A +F + ++ + W SMI + +G
Sbjct: 303 IHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGD 362
Query: 394 MDEALDLFRQMPKK------NSVSWNTMISGYAQAGQMDSAENIFQAMEER 438
+AL++FR+M ++ NSV++ +IS A AG + + F M+E+
Sbjct: 363 GVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 210 bits (534), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 226/439 (51%), Gaps = 32/439 (7%)
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLS 374
+ T+I GY+ V +EA YN+M + D L+ + + E ++ Q+
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 375 TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQA 434
++ D+F Q N++I+ Y + G+M+ + +F+
Sbjct: 160 ------------------KLGLEADVFVQ---------NSLINMYGRCGEMELSSAVFEK 192
Query: 435 MEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQV 493
+E + SW+S+++ ++ + L M E K ++S +
Sbjct: 193 LESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNL 252
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G +H ++L++ ++ V +L+ MY KCG ++ A +F +E + ++++++ISG AL
Sbjct: 253 GMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLAL 312
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
+G A + F +M+ E + PD V ++ +L+ACSH+GL +G +F M+++ +EP AE
Sbjct: 313 HGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAE 372
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSEL 673
HY CLVDLLGR G LEEA ++ + ++ N +W + L CRV +N+E+G+ AA L +L
Sbjct: 373 HYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKL 432
Query: 674 EPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDDSG 733
HN +Y+ +SN++++ W++V R R + K + PG S +E++ + F+S D
Sbjct: 433 SSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRS 492
Query: 734 RLRPETIQIILNAISAHMR 752
+ + I +L+ + ++
Sbjct: 493 HPKCKEIYKMLHQMEWQLK 511
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 137/279 (49%), Gaps = 6/279 (2%)
Query: 425 MDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXX 484
M+ A +IF+ +++ +N++I G++ + +AL M + G +PD T+
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 485 XXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISW 544
+ G Q+H + K G D+FV N+LI MY +CG +E + VF +E SW
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV 603
+S++S A G E F+ M SE + ++ + L AC++ G N G+ + ++
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261
Query: 604 EDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE-- 661
+ + + S LVD+ + G L++A ++ + M+ K N + +++ +H E
Sbjct: 262 RNISELNIIVQTS-LVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESA 319
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
+ F+ M LEP + Y+++ N + +G +E R+
Sbjct: 320 LRMFSKMIKEGLEPDHVV-YVSVLNACSHSGLVKEGRRV 357
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 160/353 (45%), Gaps = 47/353 (13%)
Query: 86 ARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTR 141
A +F + +NTMI GY++ EEA ++ M +R DNF++ ++ TR
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 142 KGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
+ + +++ V + D N++I Y + G+ + VF + K S++SM
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 199 LAGYTQNGKMGLALHFFEKM-AEKNV-VSWNLMVSGFV---NSGDLSSARQ----LFEKI 249
++ G L F M +E N+ + MVS + N+G L+ L I
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
N + +++ + + G + +A +F M +N ++++AMI+ A + + A+++F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 310 KMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDE 365
KM + D V + +++N G + E R V+ +M ++ G+V+
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEM---------------LKEGKVEP 369
Query: 366 ASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMIS 417
++ + C ++ ++G ++EAL+ + +P +KN V W T +S
Sbjct: 370 TAEHYG--------CLVDLLG---RAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 133/320 (41%), Gaps = 54/320 (16%)
Query: 281 PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAR 336
PC +N MI Y + +EA+ + +M + D ++ ++ R+ + E +
Sbjct: 95 PC--TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGK 152
Query: 337 EVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSG 392
+++ Q+ + A+ + + LI + G ++ +S +F +L ++ W+SM++ G
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 393 RMDEALDLFRQMPKK----------------------------------------NSVSW 412
E L LFR M + N +
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQ 272
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
+++ Y + G +D A +IFQ ME+RN ++++++I+G + AL+ M +EG +
Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 332
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS-NALIAMYAKCGRVESAEQ 531
PD + + G ++ +LK G + L+ + + G +E A +
Sbjct: 333 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 392
Query: 532 VFTA--IECVDLISWNSLIS 549
+ IE D+I W + +S
Sbjct: 393 TIQSIPIEKNDVI-WRTFLS 411
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 37/280 (13%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEE 116
+VF + ++ NS+I+++ + G++ + +F+K+ + SW++M++ M E
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSE 216
Query: 117 ASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQ 176
LF M N KA E +V L A A+ G + G
Sbjct: 217 CLLLFRGMCSETNL----------------KAEES-GMVSALLACANTGALNLGMSIHG- 258
Query: 177 FSDAEKVFNLMPVKDL--VSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFV 234
F L + +L + S++ Y + G + ALH F+KM ++N ++++ M+SG
Sbjct: 259 -------FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLA 311
Query: 235 NSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA 290
G+ SA ++F K+ P+ V +V++L + G + E RR+F M + V A
Sbjct: 312 LHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTA 371
Query: 291 MIAAYAQDL-----QIDEAVKLFIKMP-HKDGVSWTTIIN 324
DL ++EA++ +P K+ V W T ++
Sbjct: 372 EHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 271/585 (46%), Gaps = 65/585 (11%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK---- 190
++T Y+ L++A+ + E + L WN +I Y + +F ++ V+ M K
Sbjct: 124 LVTFYSAFNLLDEAQTITE-NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRA 182
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
D +Y S++ K AL F ++ +V G S ++SS R
Sbjct: 183 DEFTYPSVI-------KACAALLDF---------AYGRVVHG---SIEVSSHR------- 216
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
N ++ + R GK+ ARRLFD M ++ VSWNA+I Y + ++ EA KL +
Sbjct: 217 -CNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 311 M----PHKDGVSWTTIINGYIRVGKLDEARE-VYNQMPCKDIAAETALMSGLIQTGRVDE 365
M V+W TI G + G A V C A+++GL +
Sbjct: 276 MYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 366 A--SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAG 423
K+F+ L R S +D R N++I+ Y++
Sbjct: 336 LKWGKVFHCLVIR--------------SCSFSHDIDNVR----------NSLITMYSRCS 371
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
+ A +FQ +E ++ +WNS+I+GF N + L M G P+ T
Sbjct: 372 DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILP 431
Query: 484 XXXXXXXXQVGNQLHEYIL-KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
Q G + H YIL + Y + L + N+L+ MYAK G + +A++VF ++ D +
Sbjct: 432 LFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
++ SLI GY G A FK M + PD VT + +LSACSH+ L +G LF M
Sbjct: 492 TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKM 551
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEI 662
F I EHYSC+VDL R G L++A ++ + + ++ + +LL AC +H N I
Sbjct: 552 EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNI 611
Query: 663 GEFAAMR-LSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
GE+AA + L E +P + +Y+ L++M+A G W ++ ++ L+ D
Sbjct: 612 GEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSD 656
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 179/394 (45%), Gaps = 69/394 (17%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
NL N++IS++ + GK+ AR+LFD+MS+R+ VSWN +I Y + EA KL D M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 126 -------------------ERDNFSWAL-----MITCYTRKGKLEKARELLELVPDKLDT 161
E N+ AL M C R G + L
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL---------K 328
Query: 162 ACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSY--------NSMLAGYTQNGKMGLALH 213
AC + G K G KVF+ + ++ S+ NS++ Y++ + A
Sbjct: 329 ACSH---IGALKWG------KVFHCLVIRS-CSFSHDIDNVRNSLITMYSRCSDLRHAFI 378
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR--- 266
F+++ ++ +WN ++SGF + L +++ +PN ++ ++L FAR
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 267 --HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIIN 324
HGK L ++ WN+++ YA+ +I A ++F M +D V++T++I+
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTI- 379
GY R+GK + A + M I + A++S + V E +F ++ I
Sbjct: 499 GYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR 558
Query: 380 ----CWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
++ M+ +C++G +D+A D+F +P + S
Sbjct: 559 LRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPS 592
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 148/335 (44%), Gaps = 64/335 (19%)
Query: 31 IGGKHVFNKNQQIIHLGKL--GKVEEAVRVFSNTIHKNLVTY-NSMISVFAKNGKISDAR 87
IG + N + H+G L GKV + + S + ++ NS+I+++++ + A
Sbjct: 318 IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAF 377
Query: 88 QLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKG 143
+F ++ +L +WN++I+G+ +N EE S L M ++ + A ++ + R G
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 144 KLEKARE----LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
L+ +E +L K WN+++ YAK G+ A++VF+ M +D V+Y S++
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVT 259
GY + GK +AL +F+ M + P+ V+ V
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGI---------------------------KPDHVTMVA 530
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSW 319
+L + + E LF M + + +++ H +
Sbjct: 531 VLSACSHSNLVREGHWLFTKM---------------------EHVFGIRLRLEH-----Y 564
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
+ +++ Y R G LD+AR++++ +P + +A A +
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATL 599
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 137/321 (42%), Gaps = 49/321 (15%)
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+SV +++ Y+ +D A+ I + E + + WN LI +++N + +++ M
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
+G + D+ T+ G +H I S + +L+V NALI+MY + G+V+
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF-------- 579
A ++F + D +SWN++I+ Y EAFK +M V VT+
Sbjct: 237 VARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCL 296
Query: 580 ------------IGM---------------LSACSHAGLANQGLDLFKCMV---EDFAIE 609
+GM L ACSH G G +F C+V F+
Sbjct: 297 EAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG-KVFHCLVIRSCSFS-H 354
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANA-GLWGSLLGACRVHKNLEIGEF--A 666
+ + L+ + R L AF V + V+AN+ W S++ ++ E F
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQ--QVEANSLSTWNSIISGFAYNERSEETSFLLK 412
Query: 667 AMRLSELEPHNASNYITLSNM 687
M LS P N+ITL+++
Sbjct: 413 EMLLSGFHP----NHITLASI 429
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G QLH + + SG D + L+ Y+ ++ A+ + E + + WN LI Y
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
N E+ +K+M+S+ + D+ T+ ++ AC+
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA 195
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 271/585 (46%), Gaps = 65/585 (11%)
Query: 135 MITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK---- 190
++T Y+ L++A+ + E + L WN +I Y + +F ++ V+ M K
Sbjct: 124 LVTFYSAFNLLDEAQTITE-NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRA 182
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
D +Y S++ K AL F ++ +V G S ++SS R
Sbjct: 183 DEFTYPSVI-------KACAALLDF---------AYGRVVHG---SIEVSSHR------- 216
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
N ++ + R GK+ ARRLFD M ++ VSWNA+I Y + ++ EA KL +
Sbjct: 217 -CNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 311 M----PHKDGVSWTTIINGYIRVGKLDEARE-VYNQMPCKDIAAETALMSGLIQTGRVDE 365
M V+W TI G + G A V C A+++GL +
Sbjct: 276 MYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 366 A--SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAG 423
K+F+ L R S +D R N++I+ Y++
Sbjct: 336 LKWGKVFHCLVIR--------------SCSFSHDIDNVR----------NSLITMYSRCS 371
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
+ A +FQ +E ++ +WNS+I+GF N + L M G P+ T
Sbjct: 372 DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILP 431
Query: 484 XXXXXXXXQVGNQLHEYIL-KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
Q G + H YIL + Y + L + N+L+ MYAK G + +A++VF ++ D +
Sbjct: 432 LFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
++ SLI GY G A FK M + PD VT + +LSACSH+ L +G LF M
Sbjct: 492 TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKM 551
Query: 603 VEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLEI 662
F I EHYSC+VDL R G L++A ++ + + ++ + +LL AC +H N I
Sbjct: 552 EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNI 611
Query: 663 GEFAAMR-LSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRD 706
GE+AA + L E +P + +Y+ L++M+A G W ++ ++ L+ D
Sbjct: 612 GEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSD 656
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 179/394 (45%), Gaps = 69/394 (17%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
NL N++IS++ + GK+ AR+LFD+MS+R+ VSWN +I Y + EA KL D M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 126 -------------------ERDNFSWAL-----MITCYTRKGKLEKARELLELVPDKLDT 161
E N+ AL M C R G + L
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL---------K 328
Query: 162 ACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSY--------NSMLAGYTQNGKMGLALH 213
AC + G K G KVF+ + ++ S+ NS++ Y++ + A
Sbjct: 329 ACSH---IGALKWG------KVFHCLVIRS-CSFSHDIDNVRNSLITMYSRCSDLRHAFI 378
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR--- 266
F+++ ++ +WN ++SGF + L +++ +PN ++ ++L FAR
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 267 --HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIIN 324
HGK L ++ WN+++ YA+ +I A ++F M +D V++T++I+
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTRDTI- 379
GY R+GK + A + M I + A++S + V E +F ++ I
Sbjct: 499 GYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR 558
Query: 380 ----CWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
++ M+ +C++G +D+A D+F +P + S
Sbjct: 559 LRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPS 592
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 148/335 (44%), Gaps = 64/335 (19%)
Query: 31 IGGKHVFNKNQQIIHLGKL--GKVEEAVRVFSNTIHKNLVTY-NSMISVFAKNGKISDAR 87
IG + N + H+G L GKV + + S + ++ NS+I+++++ + A
Sbjct: 318 IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAF 377
Query: 88 QLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKG 143
+F ++ +L +WN++I+G+ +N EE S L M ++ + A ++ + R G
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 144 KLEKARE----LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSML 199
L+ +E +L K WN+++ YAK G+ A++VF+ M +D V+Y S++
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 200 AGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVT 259
GY + GK +AL +F+ M + P+ V+ V
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGI---------------------------KPDHVTMVA 530
Query: 260 MLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSW 319
+L + + E LF M + + +++ H +
Sbjct: 531 VLSACSHSNLVREGHWLFTKM---------------------EHVFGIRLRLEH-----Y 564
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
+ +++ Y R G LD+AR++++ +P + +A A +
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATL 599
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 137/321 (42%), Gaps = 49/321 (15%)
Query: 408 NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG 467
+SV +++ Y+ +D A+ I + E + + WN LI +++N + +++ M
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
+G + D+ T+ G +H I S + +L+V NALI+MY + G+V+
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF-------- 579
A ++F + D +SWN++I+ Y EAFK +M V VT+
Sbjct: 237 VARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCL 296
Query: 580 ------------IGM---------------LSACSHAGLANQGLDLFKCMV---EDFAIE 609
+GM L ACSH G G +F C+V F+
Sbjct: 297 EAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG-KVFHCLVIRSCSFS-H 354
Query: 610 PLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANA-GLWGSLLGACRVHKNLEIGEF--A 666
+ + L+ + R L AF V + V+AN+ W S++ ++ E F
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQ--QVEANSLSTWNSIISGFAYNERSEETSFLLK 412
Query: 667 AMRLSELEPHNASNYITLSNM 687
M LS P N+ITL+++
Sbjct: 413 EMLLSGFHP----NHITLASI 429
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G QLH + + SG D + L+ Y+ ++ A+ + E + + WN LI Y
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
N E+ +K+M+S+ + D+ T+ ++ AC+
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA 195
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 213/430 (49%), Gaps = 25/430 (5%)
Query: 304 AVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV 363
AV++F +P W II G+ A Y M S RV
Sbjct: 56 AVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSM--------LQQSSSSSAICRV 107
Query: 364 DEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAG 423
D + F + +C ++M CQ R + D S+ T++ Y++ G
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSAD---------SLLCTTLLDAYSKNG 158
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
+ SA +F M R++ SWN+LI G + + +A++ M EG + + T
Sbjct: 159 DLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALG 218
Query: 484 XXXXXXXXQVGNQLHEYILKSGYIND-LFVSNALIAMYAKCGRVESAEQVFTAIECV-DL 541
+ G + GY ND + VSNA I MY+KCG V+ A QVF +
Sbjct: 219 ACSHLGDVKEGENIFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSV 273
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
++WN++I+G+A++G A A + F ++ + PD V+++ L+AC HAGL GL +F
Sbjct: 274 VTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNN 333
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNLE 661
M +E +HY C+VDLL R GRL EA +++ M + + LW SLLGA ++ ++E
Sbjct: 334 MACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVE 392
Query: 662 IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
+ E A+ + E+ +N +++ LSN++A GRW++V R+R M K+ K+PG S+IE +
Sbjct: 393 MAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAK 452
Query: 722 NQIQCFLSDD 731
I F + D
Sbjct: 453 GTIHEFYNSD 462
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 138/301 (45%), Gaps = 29/301 (9%)
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----------AEKNVV 224
G S A ++F +P +N+++ G+ + LA ++ M + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLC-----GFARHGKITEARRLFDS 279
+ + + + S+ QL +I N +S ++LC ++++G + A +LFD
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQI-NRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEA 335
MP ++V SWNA+IA + EA++L+ +M + V+ + +G + E
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 336 REVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC-WNSMIAGFCQSGRM 394
+++ ++ A + + G VD+A ++F Q + + ++ WN+MI GF G
Sbjct: 230 ENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEA 289
Query: 395 DEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSL 446
AL++F ++ K + VS+ ++ AG ++ ++F M ERN+ + +
Sbjct: 290 HRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCV 349
Query: 447 I 447
+
Sbjct: 350 V 350
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 159/359 (44%), Gaps = 36/359 (10%)
Query: 59 FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
F ++ ++ + IS F G +S A Q+F + + WN +I G+ +S A
Sbjct: 32 FQSSFLRSRLLERCAISPF---GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAF 88
Query: 119 KLFDVMPERDNFSWALM----ITC-YTRKGKLEKARELLELVPDKL-----------DTA 162
+ M ++ + S A+ +TC +T K AR L D+L D+
Sbjct: 89 SWYRSMLQQSSSSSAICRVDALTCSFTLKAC---ARALCSSAMDQLHCQINRRGLSADSL 145
Query: 163 CWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN 222
++ Y+K G A K+F+ MPV+D+ S+N+++AG + A+ +++M +
Sbjct: 146 LCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEG 205
Query: 223 VVSWNLMVSGFVNS----GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFD 278
+ + V + + GD+ +F N N + + +++ G + +A ++F+
Sbjct: 206 IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFE 265
Query: 279 SMPC-KNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLD 333
K+VV+WN MI +A + A+++F K+ D VS+ + G ++
Sbjct: 266 QFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVE 325
Query: 334 EAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLS-TRDTICWNSMIAG 387
V+N M CK + ++ L + GR+ EA + +S D + W S++
Sbjct: 326 YGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 131/289 (45%), Gaps = 48/289 (16%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
+++ ++KNG + A +LFD+M R++ SWN +IAG + + EA +L+ M
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME----- 202
Query: 131 SWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK 190
T R+ ++ A + + G + E +F+
Sbjct: 203 ------TEGIRRSEVTVV-----------------AALGACSHLGDVKEGENIFHGYSND 239
Query: 191 DLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKNVVSWNLMVSGFVNSGDLSSARQLFEKI 249
+++ N+ + Y++ G + A FE+ +K+VV+WN M++GF G+ A ++F+K+
Sbjct: 240 NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 299
Query: 250 PN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQI 301
+ P+ VS++ L G + +F++M CK N+ + ++ ++ ++
Sbjct: 300 EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRL 359
Query: 302 DEAVKLFIKMPH-KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
EA + M D V W +++ A E+Y+ + +IA+
Sbjct: 360 REAHDIICSMSMIPDPVLWQSLLG----------ASEIYSDVEMAEIAS 398
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 17/273 (6%)
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFL---QNSLYFDALKSLVLMGREGK---KPDQS 476
G + A IF+ + + WN++I GF SL F +S++ + D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T +QLH I + G D + L+ Y+K G + SA ++F +
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
D+ SWN+LI+G A EA + +K+M +E + +VT + L ACSH G +G
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
++F D I A +D+ + G +++A+ V K + W +++ V
Sbjct: 231 NIFHGYSNDNVIVSNAA-----IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 657 ----HKNLEIGEFAAMRLSELEPHNASNYITLS 685
H+ LEI F + + ++P + S L+
Sbjct: 286 HGEAHRALEI--FDKLEDNGIKPDDVSYLAALT 316
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSN-TIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
V N I K G V++A +VF T K++VT+N+MI+ FA +G+ A ++FDK+
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 95 QRNL----VSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRKGKLE 146
+ VS+ + H +VE +F+ M ER+ + ++ +R G+L
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLR 360
Query: 147 KAREL---LELVPDKL 159
+A ++ + ++PD +
Sbjct: 361 EAHDIICSMSMIPDPV 376
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 181/330 (54%), Gaps = 8/330 (2%)
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
Y + + A +F + + ++V W+ L+ G+++ L + L+ M +G +PD+ +
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYI-NDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
G +HE++ K +I +D+FV AL+ MYAKCG +E+A +VF +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 538 CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGLANQGL 596
++ SW +LI GYA GYA +A +++ E+ + PD V +G+L+AC+H G +G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+ + M + I P EHYSC+VDL+ R GRL++A N++ M +K A +WG+LL CR
Sbjct: 342 SMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRT 401
Query: 657 HKNLEIGEFAAMRLSELEPHNA----SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
HKN+E+GE A L +LE N + + LSN++ R E ++R ++ + K
Sbjct: 402 HKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKT 461
Query: 713 PGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
PG S +EV + F+S D P +QI
Sbjct: 462 PGWSVLEVDGNVTKFVSGDVS--HPNLLQI 489
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 407 KNSVSWNTMISGYAQAGQMDS----AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
+N+ + + +++ + ++ A +IF ++E N ++++I ++S L+
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 463 LVLMGREGKK---PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG-YINDLFVSNALIA 518
+LM +E ++ P TF VG Q+H +++K+G +++D V ++
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 519 MYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
+Y + + A +VF I D++ W+ L++GY G E + F++ML + + PD+ +
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
L+AC+ G QG + + + + IE + LVD+ + G +E A V + +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 639 DVKANAGLWGSLLGA 653
+ N W +L+G
Sbjct: 281 -TRRNVFSWAALIGG 294
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 160/393 (40%), Gaps = 70/393 (17%)
Query: 63 IHKNLVTYNSMISVFAK----NGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEAS 118
+H+N + +++ F N A +FD + N ++TMI +S
Sbjct: 39 LHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGL 98
Query: 119 KLF---------DVMPERDNFSW---ALMITCYTRKGK-----LEKARELLELVPDKLDT 161
+ F D+ P F + A + C+ GK + K L D+
Sbjct: 99 RYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS------DS 152
Query: 162 ACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
V+ Y + DA KVF+ +P D+V ++ ++ GY + G L F +M
Sbjct: 153 HVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREM--- 209
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+V G P+ S T L A+ G + + + + + +
Sbjct: 210 -------LVKGL-----------------EPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 282 CK-----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAR 336
K +V A++ YA+ I+ AV++F K+ ++ SW +I GY G +A
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAM 305
Query: 337 EVYNQMPCKD-IAAETALMSGLI----QTGRVDEASKMFNQLSTRDTIC-----WNSMIA 386
++ +D I ++ ++ G++ G ++E M + R I ++ ++
Sbjct: 306 TCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVD 365
Query: 387 GFCQSGRMDEALDLFRQMPKKNSVS-WNTMISG 418
C++GR+D+AL+L +MP K S W +++G
Sbjct: 366 LMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA 348
++ Y +D + +A K+F ++P D V W ++NGY+R G E EV+ +M K +
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE 215
Query: 349 AE----TALMSGLIQTGRVDEASKMFNQLSTR-----DTICWNSMIAGFCQSGRMDEALD 399
+ T ++ Q G + + + + + D +++ + + G ++ A++
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 400 LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLI 447
+F+++ ++N SW +I GYA G A + +E + + +S++
Sbjct: 276 VFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVV 323
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 53/255 (20%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD----GVSWTT------- 321
A +FDS+ N ++ MI ++ Q ++ F+ M ++ S+ T
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 322 -IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTIC 380
+ + VGK V N + D +T ++ ++ + +A K+F+++ D +
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 381 WNSMIAGFCQSGRMDEALDLFRQM------PKKNSV------------------------ 410
W+ ++ G+ + G E L++FR+M P + SV
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 411 --SW--------NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
SW ++ YA+ G +++A +F+ + RN+ SW +LI G+ A+
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAM 305
Query: 461 KSLVLMGRE-GKKPD 474
L + RE G KPD
Sbjct: 306 TCLERLEREDGIKPD 320
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 182/326 (55%), Gaps = 12/326 (3%)
Query: 413 NTMISGYAQAGQMDSAENIF-QAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK 471
+++ Y+ G +D A +F + E++NIV W ++I+ + +N +A++ M E
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG--YINDLFVSNALIAMYAKCGRVESA 529
+ D Q+G +++ +K DL + N+L+ MY K G E A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 530 EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE------VVPDQVTFIGML 583
++F D+ ++ S+I GYALNG A E+ + FK+M + + + P+ VTFIG+L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
ACSH+GL +G FK M+ D+ ++P H+ C+VDL R G L++A + M +K N
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
+W +LLGAC +H N+E+GE R+ EL+ + +Y+ LSN++A G W+E ++R
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCFLS 729
+R +R +PG SWIE+ + I F+S
Sbjct: 404 VRKRR---MPGKSWIELGSIINEFVS 426
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 136/309 (44%), Gaps = 34/309 (11%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQR-NLVSWNTMIAGYLHNSMVEEASKLFDVMP---- 125
S++ ++ G + ARQ+FD+ ++ N+V W MI+ Y N EA +LF M
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLELVPDK-----LDTACWNAVIAGYAKKGQFSDA 180
E D + ++ G ++ E+ + +D N+++ Y K G+ A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-----AEKNVVSWN-------L 228
K+F+ KD+ +Y SM+ GY NG+ +L F+KM ++ V++ N L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 229 MV---SGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK-N 284
M SG V G + + P + M+ F R G + +A + MP K N
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 285 VVSWNAMIAAYA--QDLQIDEAVKLFIKMPHKDGV-SWTTIINGYIRVGKLDEAREVYN- 340
V W ++ A + ++++ E V+ I +D V + + N Y G DE ++ +
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 341 ----QMPCK 345
+MP K
Sbjct: 404 VRKRRMPGK 412
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 136/271 (50%), Gaps = 31/271 (11%)
Query: 196 NSMLAGYTQNGKMGLALHFFE---KMAEKNVVSWNLMVSGFVNSGDLSSA---RQ---LF 246
N L Y ++G+ AL F + + V S++++ + V+S +S+ RQ L
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 247 EKIPNPNAVSWVTMLCGF-ARHGKITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQIDEA 304
K+ + T L GF + G + AR++FD P K N+V W AMI+AY ++ EA
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 305 VKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCK------DIAAETALM 354
++LF +M + DGV T ++ +G + E+Y++ + D+ +L+
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLL 211
Query: 355 SGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP--------- 405
+ +++G ++A K+F++ +D + SMI G+ +G+ E+L+LF++M
Sbjct: 212 NMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTV 271
Query: 406 -KKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
N V++ ++ + +G ++ + F++M
Sbjct: 272 ITPNDVTFIGVLMACSHSGLVEEGKRHFKSM 302
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 134/282 (47%), Gaps = 34/282 (12%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQNGKMGLALHFFEKM-AEKN 222
+++ Y+ G A +VF+ P K ++V + +M++ YT+N A+ F++M AEK
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 223 VVSWNLMVSGFVNSGDLSSARQLFEKIPNPN-------AVSWV---TMLCGFARHGKITE 272
+ ++ DL A Q+ E+I + + A+ ++L + + G+ +
Sbjct: 164 ELDGVIVTVALSACADLG-AVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEK 222
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTII-NGYIRVGK 331
AR+LFD K+V ++ +MI YA + Q E+++LF KM D T I N +G
Sbjct: 223 ARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 332 LDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN-QLSTRDTICWNSMIAGFCQ 390
L M C SGL++ G+ S + + L R+ + M+ FC+
Sbjct: 283 L---------MACSH--------SGLVEEGKRHFKSMIMDYNLKPREA-HFGCMVDLFCR 324
Query: 391 SGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENI 431
SG + +A + QMP K N+V W T++ + G ++ E +
Sbjct: 325 SGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEV 366
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM-----SQRNLVSWN 102
K G+ E+A ++F ++ K++ TY SMI +A NG+ ++ +LF KM SQ +++ N
Sbjct: 216 KSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPN 275
Query: 103 TM-IAGYL----HNSMVEEASKLFDVM-------PERDNFSWALMITCYTRKGKLEKARE 150
+ G L H+ +VEE + F M P +F M+ + R G L+ A E
Sbjct: 276 DVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF--GCMVDLFCRSGHLKDAHE 333
Query: 151 LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKV 183
+ +P K +T W ++ + G E+V
Sbjct: 334 FINQMPIKPNTVIWRTLLGACSLHGNVELGEEV 366
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI-ECVDLISWNSLISGYA 552
G Q+H + K G+ + + +L+ Y+ G V+ A QVF E +++ W ++IS Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLF 599
N ++EA + FK+M +E++ D V LSAC+ G G +++
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIY 190
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 90/186 (48%), Gaps = 25/186 (13%)
Query: 49 LGKVEEAVRVFSNTIHK------NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWN 102
LG V+ ++S +I + +L NS+++++ K+G+ AR+LFD+ ++++ ++
Sbjct: 180 LGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYT 239
Query: 103 TMIAGYLHNSMVEEASKLFDVM------------PERDNFSWALMITCYTRKGKLEKA-R 149
+MI GY N +E+ +LF M P F LM ++ G +E+ R
Sbjct: 240 SMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHS--GLVEEGKR 297
Query: 150 ELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK-DLVSYNSMLAGYTQN 205
++ D K A + ++ + + G DA + N MP+K + V + ++L + +
Sbjct: 298 HFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLH 357
Query: 206 GKMGLA 211
G + L
Sbjct: 358 GNVELG 363
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 214/441 (48%), Gaps = 34/441 (7%)
Query: 284 NVVSWNAMIAAYAQ-DLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
NVV + ++ AY++ + ++ +F MP+++ SW II + R G
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSG------------ 112
Query: 343 PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFR 402
+ +D +M+ + R +I C + R ++ DL
Sbjct: 113 ---------------FASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIH 157
Query: 403 QMPKKNSVSWNTMISG-----YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
+ K S + +S Y G++ A +F M R+ V + ++ G++Q
Sbjct: 158 VLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAM 217
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
L MG G D + G +H + ++ L + NA+
Sbjct: 218 LGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAIT 277
Query: 518 AMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
MY KC ++ A VF + D+ISW+SLI GY L+G + +FK F +ML E + P+ V
Sbjct: 278 DMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAV 337
Query: 578 TFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRG 637
TF+G+LSAC+H GL + F+ M +++ I P +HY+ + D + R G LEEA +
Sbjct: 338 TFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLED 396
Query: 638 MDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEV 697
M VK + + G++L C+V+ N+E+GE A L +L+P AS Y+TL+ +++ AGR++E
Sbjct: 397 MPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEA 456
Query: 698 ERLRVLMRDKRAGKLPGCSWI 718
E LR M++K+ K+PGCS I
Sbjct: 457 ESLRQWMKEKQISKVPGCSSI 477
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 190/418 (45%), Gaps = 51/418 (12%)
Query: 63 IHKNLVTYNSMISVFAK-NGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF 121
++ N+V + ++ ++K N + +F M RN+ SWN +I + + ++ LF
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 122 DVM-----PERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTA----CWNAVIAGYA 172
M D+F+ L++ + + K+ +L+ ++ KL + +A++ Y
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACS-ASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV 180
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN-VVSWNLMVS 231
G+ A K+F+ MPV+D V Y +M GY Q G+ L L F +M + +MVS
Sbjct: 181 DMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVS 240
Query: 232 GFVNSGDLSSARQLFEKIPNPNAVSWVTMLC---GFARHGKITE----------ARRLFD 278
+ G L + + + W C G IT+ A +F
Sbjct: 241 LLMACGQLGALKH------GKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFV 294
Query: 279 SMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDE 334
+M ++V+SW+++I Y D + + KLF +M + + V++ +++ G +++
Sbjct: 295 NMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEK 354
Query: 335 A------REVYNQMP-CKDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTICWNSMIA 386
+ + YN +P K A+ MS + G ++EA K + + D ++++
Sbjct: 355 SWLYFRLMQEYNIVPELKHYASVADCMS---RAGLLEEAEKFLEDMPVKPDEAVMGAVLS 411
Query: 387 GFCQSGRMD----EALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
G G ++ A +L + P+K S + T+ Y+ AG+ D AE++ Q M+E+ I
Sbjct: 412 GCKVYGNVEVGERVARELIQLKPRKASY-YVTLAGLYSAAGRFDEAESLRQWMKEKQI 468
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 15/189 (7%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNT 103
K ++ A VF N +++++++S+I + +G + + +LFD+M + N V++
Sbjct: 282 KCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLG 341
Query: 104 MIAGYLHNSMVEEASKLFDVMPERDNFS----WALMITCYTRKGKLEKARELLELVPDKL 159
+++ H +VE++ F +M E + +A + C +R G LE+A + LE +P K
Sbjct: 342 VLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKP 401
Query: 160 DTACWNAVIAGYAKKGQFSDAEKV----FNLMPVKDLVSYNSMLAG-YTQNGKMGLALHF 214
D A AV++G G E+V L P K SY LAG Y+ G+ A
Sbjct: 402 DEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRK--ASYYVTLAGLYSAAGRFDEAESL 459
Query: 215 FEKMAEKNV 223
+ M EK +
Sbjct: 460 RQWMKEKQI 468
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 202 bits (515), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 209/409 (51%), Gaps = 65/409 (15%)
Query: 264 FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTII 323
+ +H + AR++FD + + WN MI+ Y + +EA KLF MP D VSWT +I
Sbjct: 146 YVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMI 205
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN---QLSTR-DTI 379
G+ +V L+ AR+ +++MP K + + A++SG Q G ++A ++FN +L R +
Sbjct: 206 TGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNET 265
Query: 380 CWNSMIAG--------------------------FCQSGRMD---------EALDLFRQM 404
W +I+ F ++ +D A +F ++
Sbjct: 266 TWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL 325
Query: 405 -PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN---SLYFDAL 460
++N V+WN MISGY + G M SA +F M +RN+VSWNSLI G+ N +L +
Sbjct: 326 GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 461 KSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK-------SGYINDLFVS 513
+ ++ G KPD+ T ++G+ + +YI K SGY
Sbjct: 386 EDMIDYG--DSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY------- 436
Query: 514 NALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
+LI MYA+ G + A++VF ++ D++S+N+L + +A NG +E +M E +
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE 496
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
PD+VT+ +L+AC+ AGL +G +FK + PLA+HY+C+ DLL
Sbjct: 497 PDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 227/484 (46%), Gaps = 70/484 (14%)
Query: 61 NTIHKNLVTYNSM----------ISVFAK-NGKISDARQLFDKMSQRNLVSWNTMIAGYL 109
N IH L+ +NS+ IS + R +FD ++ N+ N+M +
Sbjct: 23 NQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFS 82
Query: 110 HNSMVEEASKLFD------VMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC 163
M + +L++ +MP D FS+ ++I R G L +A L+E + D
Sbjct: 83 KMDMANDVLRLYEQRSRCGIMP--DAFSFPVVIKSAGRFGILFQA--LVEKLGFFKDPYV 138
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
N ++ Y K A KVF+ + + +N M++GY + G A F+ M E +V
Sbjct: 139 RNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDV 198
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM--- 280
VSW +M++GF DL +AR+ F+++P + VSW ML G+A++G +A RLF+ M
Sbjct: 199 VSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL 258
Query: 281 -PCKNVVSWNAMIAA--YAQDLQIDEAVKLFI--KMPHKDGVSWTTIINGYIRVGKLDEA 335
N +W +I+A + D + ++ I K + T +++ + + + A
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 336 REVYNQMPC-KDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRM 394
R ++N++ +++ A++SG + G + A ++F+ + R+ + WNS+IAG+ +G+
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQA 378
Query: 395 DEALDLFRQM-------P----------------------------KKNSVSWN-----T 414
A++ F M P +KN + N +
Sbjct: 379 ALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRS 438
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+I YA+ G + A+ +F M+ER++VS+N+L T F N + L L M EG +PD
Sbjct: 439 LIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPD 498
Query: 475 QSTF 478
+ T+
Sbjct: 499 RVTY 502
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 226/482 (46%), Gaps = 55/482 (11%)
Query: 273 ARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIK------MPHKDGVSWTTIINGY 326
R +FDS+ NV N+M +++ ++ ++L+ + MP D S+ +I
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMP--DAFSFPVVIKSA 116
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIA 386
R G L +A V KD +M ++ V+ A K+F+Q+S R WN MI+
Sbjct: 117 GRFGILFQAL-VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 387 GFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
G+ + G +EA LF MP+ + VSW MI+G+A+ +++A F M E+++VSWN++
Sbjct: 176 GYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAM 235
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
++G+ QN DAL+ M R G +P+++T+ + L + I +
Sbjct: 236 LSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRV 295
Query: 507 INDLFVSNALIAMYAKC--------------------------------GRVESAEQVFT 534
+ FV AL+ M+AKC G + SA Q+F
Sbjct: 296 RLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFD 355
Query: 535 AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE-EVVPDQVTFIGMLSACSHAGLAN 593
+ +++SWNSLI+GYA NG A A + F+ M+ + PD+VT I +LSAC H
Sbjct: 356 TMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA--- 412
Query: 594 QGLDLFKCMVEDF---AIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAGLW 647
L+L C+V+ I+ Y L+ + R G L EA F+ ++ DV + L+
Sbjct: 413 -DLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLF 471
Query: 648 GSLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
+ + L + + M+ +EP + Y ++ AG +E +R+ +R+
Sbjct: 472 TAFAANGDGVETLNL--LSKMKDEGIEPDRVT-YTSVLTACNRAGLLKEGQRIFKSIRNP 528
Query: 708 RA 709
A
Sbjct: 529 LA 530
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 217/469 (46%), Gaps = 94/469 (20%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ---------------------- 95
+F + N+ NSM F+K +D +L+++ S+
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 96 ------------RNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKG 143
++ N ++ Y+ + VE A K+FD + +R W +MI+ Y + G
Sbjct: 122 LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWG 181
Query: 144 KLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYT 203
E+A +L +++P+ D W +I G+AK +A K F+ MP K +VS+N+ML+GY
Sbjct: 182 NKEEACKLFDMMPEN-DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYA 240
Query: 204 QNGKMGLALHFFEKM----AEKNVVSWNLMVSG--------------------------F 233
QNG AL F M N +W +++S F
Sbjct: 241 QNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCF 300
Query: 234 VNSG---------DLSSARQLFEKI-PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
V + D+ SAR++F ++ N V+W M+ G+ R G ++ AR+LFD+MP +
Sbjct: 301 VKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR 360
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKM-----PHKDGVSWTTIINGYIRVGKL------ 332
NVVSWN++IA YA + Q A++ F M D V+ ++++ + L
Sbjct: 361 NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCI 420
Query: 333 -DEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQS 391
D R+ NQ+ D + +L+ + G + EA ++F+++ RD + +N++ F +
Sbjct: 421 VDYIRK--NQIKLND-SGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAAN 477
Query: 392 GRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME 436
G E L+L +M + + V++ ++++ +AG + + IF+++
Sbjct: 478 GDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 182/347 (52%), Gaps = 52/347 (14%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
K G EEA ++F ++V++ MI+ FAK + +AR+ FD+M ++++VSWN M++G
Sbjct: 179 KWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
Query: 108 YLHNSMVEEASKLFDVMPE---RDN-FSWALMITCYTRKGKLEKARELLELVPDK---LD 160
Y N E+A +LF+ M R N +W ++I+ + + R L++L+ +K L+
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN 298
Query: 161 TACWNAVIAGYAKKGQFSDAEKVFN-LMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
A++ +AK A ++FN L ++LV++N+M++GYT+ G M A F+ M
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKI-----PNPNAVSWVTML--CG--------- 263
++NVVSWN +++G+ ++G + A + FE + P+ V+ +++L CG
Sbjct: 359 KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 264 ------------------------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
+AR G + EA+R+FD M ++VVS+N + A+A +
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANG 478
Query: 300 QIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQM 342
E + L KM + D V++T+++ R G L E + ++ +
Sbjct: 479 DGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 176/322 (54%), Gaps = 16/322 (4%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFL--QNSLYFDALKSLVLMGR-- 468
T++ YA+ G + A +F M ER V+WN++I G+ ++ +A K++VL R
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 469 ---EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIN--DLFVSNALIAMYAKC 523
G +P +T ++G+ +H YI K G+ D+F+ AL+ MY+KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 524 GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
G + +A VF ++ ++ +W S+ +G ALNG E +M + P+++TF +L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKAN 643
SA H GL +G++LFK M F + P+ EHY C+VDLLG+ GR++EA+ + M +K +
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 644 AGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHN-------ASNYITLSNMHAEAGRWEE 696
A L SL AC ++ +GE L E+E + +Y+ LSN+ A G+W E
Sbjct: 391 AILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Query: 697 VERLRVLMRDKRAGKLPGCSWI 718
VE+LR M+++R PG S++
Sbjct: 451 VEKLRKEMKERRIKTRPGYSFV 472
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 55/279 (19%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLH-----NSMVEEASKLF---- 121
+++ +AKNG + AR++FD+M +R V+WN MI GY N +A LF
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 122 ----DVMPERDNFSWALMITCYTRKGKLEKAR------ELLELVPDKLDTACWNAVIAGY 171
V P + + +++ ++ G LE E L P+ +D A++ Y
Sbjct: 211 CCGSGVRP--TDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPE-VDVFIGTALVDMY 267
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVS 231
+K G ++A VF LM VK++ ++ SM G NG+ + +MAE +
Sbjct: 268 SKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGI-------- 319
Query: 232 GFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS---- 287
PN +++ ++L + G + E LF SM + V+
Sbjct: 320 -------------------KPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIE 360
Query: 288 -WNAMIAAYAQDLQIDEAVKLFIKMPHK-DGVSWTTIIN 324
+ ++ + +I EA + + MP K D + ++ N
Sbjct: 361 HYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCN 399
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQ-----DLQIDEAVKLFIKMP 312
T+L +A++G + AR++FD MP + V+WNAMI Y + +A+ LF +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 313 -HKDGV--SWTTII--------NGYIRVGKLDEAR-EVYNQMPCKDIAAETALMSGLIQT 360
GV + TT++ G + +G L E P D+ TAL+ +
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 361 GRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMI 416
G ++ A +F + ++ W SM G +GR +E +L +M K N +++ +++
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 417 SGYAQAGQMDSAENIFQAMEER 438
S Y G ++ +F++M+ R
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTR 352
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 144/332 (43%), Gaps = 50/332 (15%)
Query: 46 LGKLGKVEEAVRVFSNTIHKNLVTY-NSMISVFA-------------KNGKISDAR-QLF 90
L K K E+++R+F+N K+ + Y N VF + G+I +
Sbjct: 81 LLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKL 140
Query: 91 DKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTR---KGKLEK 147
+ + L+ T++ Y N + A K+FD MPER + +W MI Y KG
Sbjct: 141 GFLYESELIG-TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGN-HN 198
Query: 148 ARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKD--LVSYNSMLAGYTQN 205
AR+ + L + + C + V + +D V L + L+ S++ GY +
Sbjct: 199 ARKAMVLF--RRFSCCGSGV--------RPTDTTMVCVLSAISQTGLLEIGSLVHGYIE- 247
Query: 206 GKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFA 265
K+G E +V +V + G L++A +FE + N +W +M G A
Sbjct: 248 -KLGFT-------PEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLA 299
Query: 266 RHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS--- 318
+G+ E L + M N +++ ++++AY ++E ++LF M + GV+
Sbjct: 300 LNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVI 359
Query: 319 --WTTIINGYIRVGKLDEAREVYNQMPCKDIA 348
+ I++ + G++ EA + MP K A
Sbjct: 360 EHYGCIVDLLGKAGRIQEAYQFILAMPIKPDA 391
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 125/306 (40%), Gaps = 58/306 (18%)
Query: 320 TTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQ-----TGRVDEASKMFNQLS 374
TT+++ Y + G L AR+V+++MP + A++ G +A +F + S
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 375 -----TRDT----ICWNSMIA--GFCQSGRMDEA-LDLFRQMPKKNSVSWNTMISGYAQA 422
R T +C S I+ G + G + ++ P+ + ++ Y++
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 423 GQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
G +++A ++F+ M+ +N+ +W S+ TG N + L M G KP++ TF
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITF---- 326
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
+L++ Y G VE ++F +++
Sbjct: 327 -------------------------------TSLLSAYRHIGLVEEGIELFKSMK--TRF 353
Query: 543 SWNSLISGYA----LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
+I Y L G A +A++ +L+ + PD + + +ACS G G ++
Sbjct: 354 GVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEI 413
Query: 599 FKCMVE 604
K ++E
Sbjct: 414 GKALLE 419
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 191/347 (55%), Gaps = 3/347 (0%)
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
NS++ + G +D A LF ++PK++ VSWN++I+G + G + +A +F M ++NI+
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
SWN +I+ +L + ++ M R G + ++ST + G +H +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
+++ + + + ALI MY KC V A ++F ++ + ++WN +I + L+G
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDL 621
+ F+ M++ + PD+VTF+G+L C+ AGL +QG + MV++F I+P H C+ +L
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANL 396
Query: 622 LGRMGRLEEAFNVVRGM---DVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEPHNA 678
G EEA ++ + DV + W +LL + R N +GE A L E +P N
Sbjct: 397 YSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNY 456
Query: 679 SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQ 725
Y L N+++ GRWE+V R+R ++++++ G++PGC ++++ +
Sbjct: 457 KYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 12/221 (5%)
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
N ++ + G L A++LF +IP + VSW +++ G R+G + A +LFD MP KN++
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQM 342
SWN MI+AY ++ LF +M + + ++N R +L E R V+ +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 343 P----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL 398
+ +TAL+ + V A ++F+ LS R+ + WN MI C GR + L
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 399 DLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAM 435
+LF M + + V++ ++ G A+AG + ++ + M
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM 377
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 194/439 (44%), Gaps = 49/439 (11%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS 94
H+F + ++I G A+R+ ++ +Y +S++ GK+ A +F
Sbjct: 37 HLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYT--VSIYRSIGKLYCANPVFK--- 91
Query: 95 QRNLVSWNTMIAGYLHNSMVEEASKL-FDVMP---ERDNFSWALMI-----TCYTRKGKL 145
YL +S ++A FD++ D++++ +I TC GK+
Sbjct: 92 ------------AYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKM 139
Query: 146 EKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQN 205
+ + L N+++ Y G A+K+F +P +D+VS+NS++AG +N
Sbjct: 140 CHGQAIKHGCDQVLPVQ--NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRN 197
Query: 206 GKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTML 261
G + A F++M +KN++SWN+M+S ++ + + + LF ++ N + V +L
Sbjct: 198 GDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLL 257
Query: 262 CGFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV 317
R ++ E R + S+ +VV A+I Y + ++ A ++F + ++ V
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV 317
Query: 318 SWTTIINGYIRVGKLDEAREVY----NQMPCKDIAAETALMSGLIQTGRVDEASKMFNQL 373
+W +I + G+ + E++ N M D ++ G + G V + ++ +
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM 377
Query: 374 STRDTICWN-----SMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQ 424
I N M + +G +EA + + +P ++ S W ++S G
Sbjct: 378 VDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
Query: 425 MDSAENIFQAMEERNIVSW 443
E+I +++ E + +++
Sbjct: 438 PTLGESIAKSLIETDPLNY 456
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 30/224 (13%)
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSL--YFDALKSLVLMGREGKKP 473
+S Y G++ A +F+A L++ + +L YFD L R G P
Sbjct: 74 VSIYRSIGKLYCANPVFKAY----------LVSSSPKQALGFYFDIL-------RFGFVP 116
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
D TF G H +K G L V N+L+ MY CG ++ A+++F
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLF 176
Query: 534 TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
I D++SWNS+I+G NG + A K F +M + ++ + M+SA A
Sbjct: 177 VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI----MISAYLGANNPG 232
Query: 594 QGLDLFKCMVEDFAIEPLAEHYSCLVDLL---GRMGRLEEAFNV 634
+ LF+ MV + S LV LL GR RL+E +V
Sbjct: 233 VSISLFREMVR----AGFQGNESTLVLLLNACGRSARLKEGRSV 272
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 183/315 (58%), Gaps = 1/315 (0%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
++++ YA+ G++ A +F M +RN+V+W+ ++ G+ Q +AL E
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
+ +F ++G Q+H +KS + + FV ++L+++Y+KCG E A QV
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 533 FTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
F + +L WN+++ YA + + + + FK+M + P+ +TF+ +L+ACSHAGL
Sbjct: 275 FNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLG 652
++G F M E IEP +HY+ LVD+LGR GRL+EA V+ M + +WG+LL
Sbjct: 335 DEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
Query: 653 ACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
+C VHKN E+ FAA ++ EL P ++ +I+LSN +A GR+E+ + R L+RD+ K
Sbjct: 394 SCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKE 453
Query: 713 PGCSWIEVQNQIQCF 727
G SW+E +N++ F
Sbjct: 454 TGLSWVEERNKVHTF 468
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 149/303 (49%), Gaps = 21/303 (6%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPER-- 127
+S++ ++AK G+I AR++FD+M QRN+V+W+ M+ GY EEA LF + + E
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 128 -DNFSWALMITCYTRKGKLEKARE---LLELVPDKLDTACWNAVIAGYAKKGQFSDAEKV 183
+++S++ +I+ LE R+ L + +++++ Y+K G A +V
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDL 239
FN +PVK+L +N+ML Y Q+ + F++M + N +++ +++ ++G +
Sbjct: 275 FNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 240 SSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-WNAMIAA 294
R F+++ P + +++ R G++ EA + +MP S W A++ +
Sbjct: 335 DEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 394
Query: 295 YA----QDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
+L A K+F P G+ ++ N Y G+ ++A + + + E
Sbjct: 395 CTVHKNTELAAFAADKVFELGPVSSGMH-ISLSNAYAADGRFEDAAKARKLLRDRGEKKE 453
Query: 351 TAL 353
T L
Sbjct: 454 TGL 456
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 152/331 (45%), Gaps = 43/331 (12%)
Query: 160 DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
D ++++ YAK G+ A K+F+ MP +++V+++ M+ GY Q G+ AL F++
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 220 EKNVV----SWNLMVSGFVNSGDLSSARQLF----EKIPNPNAVSWVTMLCGFARHGKIT 271
+N+ S++ ++S NS L RQ+ + + ++ +++ +++ G
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYI 327
A ++F+ +P KN+ WNAM+ AYAQ + ++LF +M + +++ ++N
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 328 RVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
G +DE R ++QM + R++ K + S++
Sbjct: 330 HAGLVDEGRYYFDQM----------------KESRIEPTDKHY-----------ASLVDM 362
Query: 388 FCQSGRMDEALDLFRQMPKKNSVS-WNTMISGYAQAGQMDSAENIFQAMEERNIVSWN-- 444
++GR+ EAL++ MP + S W +++ + A + E VS
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422
Query: 445 -SLITGFLQNSLYFDALKSLVLMGREGKKPD 474
SL + + + DA K+ L+ G+K +
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKE 453
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNT 103
K G E A +VF+ KNL +N+M+ +A++ +LF +M + N +++
Sbjct: 264 KCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLN 323
Query: 104 MIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKL 159
++ H +V+E FD M E + +A ++ R G+L++A E++ +P
Sbjct: 324 VLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDP 383
Query: 160 DTACWNAVIAGYA--KKGQFS--DAEKVFNLMPVKDLVSYNSMLAGYTQNGK 207
+ W A++ K + + A+KVF L PV + + S+ Y +G+
Sbjct: 384 TESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGM-HISLSNAYAADGR 434
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 179/330 (54%), Gaps = 8/330 (2%)
Query: 419 YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
Y + + A +F + + ++V W+ L+ G+++ L + L+ M G +PD+ +
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSV 221
Query: 479 XXXXXXXXXXXXXQVGNQLHEYILKSGYI-NDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
G +HE++ K +I +D+FV AL+ MYAKCG +E+A +VF +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT 281
Query: 538 CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEE-VVPDQVTFIGMLSACSHAGLANQGL 596
++ SW +LI GYA GYA +A ++ E+ + PD V +G+L+AC+H G +G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRV 656
+ + M + I P EHYSC+VDL+ R GRL++A +++ M +K A +WG+LL CR
Sbjct: 342 TMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRT 401
Query: 657 HKNLEIGEFAAMRLSELEPHNA----SNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKL 712
HKN+E+GE A L +LE N + + LSN++ R E ++R ++ + K
Sbjct: 402 HKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKT 461
Query: 713 PGCSWIEVQNQIQCFLSDDSGRLRPETIQI 742
PG S +EV + F+S D P +QI
Sbjct: 462 PGWSLLEVDGIVTKFVSGDVS--HPNLLQI 489
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 122/255 (47%), Gaps = 9/255 (3%)
Query: 407 KNSVSWNTMISGYAQAGQMDS----AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
+N+ + + +++ + ++ A +IF ++E N ++++I ++S L+
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 463 LVLMGREGKK---PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG-YINDLFVSNALIA 518
+LM +E ++ P TF VG Q+H +++K+G +++D V ++
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 519 MYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
+Y + + A +VF I D++ W+ L++GY G E + FK+ML + PD+ +
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
L+AC+ G QG + + + + IE + LVD+ + G +E A V +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 639 DVKANAGLWGSLLGA 653
+ N W +L+G
Sbjct: 281 -TRRNVFSWAALIGG 294
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 156/388 (40%), Gaps = 93/388 (23%)
Query: 95 QRNLVSWNTMIAGYLH----NSMVEEASKLFDVMPERDNFSWALMITCYTRKGK------ 144
RN + + ++ +LH N AS +FD + ++F + MI +R +
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 145 ---LEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG 201
L E ++ P L ++ +I K FS +++ + VK+ V + G
Sbjct: 100 YFLLMVKEEEEDITPSYLT---FHFLIVACLKACFFSVGKQI-HCWVVKNGVFLSD---G 152
Query: 202 YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTML 261
+ Q G + + +V L AR++F++IP P+ V W ++
Sbjct: 153 HVQTGVLRI----------------------YVEDKLLFDARKVFDEIPQPDVVKWDVLM 190
Query: 262 CGFARHGKITEARRLFDSMPCK-------------------------------------- 283
G+ R G +E +F M +
Sbjct: 191 NGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWI 250
Query: 284 --NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQ 341
+V A++ YA+ I+ AV++F K+ ++ SW +I GY G +A ++
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDR 310
Query: 342 MPCKD-IAAETALMSGLI----QTGRVDEASKMFNQLSTRDTIC-----WNSMIAGFCQS 391
+ +D I ++ ++ G++ G ++E M + R I ++ ++ C++
Sbjct: 311 IEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRA 370
Query: 392 GRMDEALDLFRQMPKKNSVS-WNTMISG 418
GR+D+ALDL +MP K S W +++G
Sbjct: 371 GRLDDALDLIEKMPMKPLASVWGALLNG 398
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/288 (18%), Positives = 122/288 (42%), Gaps = 42/288 (14%)
Query: 176 QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-------NVVSWNL 228
F A +F+ + + + Y++M+ +++ + L L +F M ++ + ++++
Sbjct: 62 HFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHF 121
Query: 229 MVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
++ + + S +Q+ WV F G +
Sbjct: 122 LIVACLKACFFSVGKQIH---------CWVVKNGVFLSDGHVQ----------------- 155
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA 348
++ Y +D + +A K+F ++P D V W ++NGY+R G E EV+ +M + I
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 349 AE----TALMSGLIQTGRVDEASKMFNQLSTR-----DTICWNSMIAGFCQSGRMDEALD 399
+ T ++ Q G + + + + + D +++ + + G ++ A++
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 400 LFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLI 447
+F ++ ++N SW +I GYA G A +E + + +S++
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV 323
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 120/269 (44%), Gaps = 40/269 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM----PE 126
++ ++ ++ + DAR++FD++ Q ++V W+ ++ GY+ + E ++F M E
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 127 RDNFSWALMITCYTRKGKLEKARELLELVPDKL----DTACWNAVIAGYAKKGQFSDAEK 182
D FS +T + G L + + + E V K D A++ YAK G A +
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 183 VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSA 242
VF + +++ S+ +++ GY G A +++ ++ +
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGI------------------ 317
Query: 243 RQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVS-----WNAMIAAYAQ 297
P++V + +L A G + E R + ++M + ++ ++ ++ +
Sbjct: 318 --------KPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCR 369
Query: 298 DLQIDEAVKLFIKMPHKDGVS-WTTIING 325
++D+A+ L KMP K S W ++NG
Sbjct: 370 AGRLDDALDLIEKMPMKPLASVWGALLNG 398
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 12/248 (4%)
Query: 315 DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLS 374
DG T ++ Y+ L +AR+V++++P D+ LM+G ++ G E ++F ++
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML 210
Query: 375 TR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNT-----MISGYAQAGQM 425
R D + + Q G + + + + KK + + ++ YA+ G +
Sbjct: 211 VRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCI 270
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGRE-GKKPDQSTFXXXXXX 484
++A +F+ + RN+ SW +LI G+ A L + RE G KPD
Sbjct: 271 ETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
Query: 485 XXXXXXXQVGNQLHEYI-LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS 543
+ G + E + + G + ++ + + GR++ A + + L S
Sbjct: 331 CAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLAS 390
Query: 544 -WNSLISG 550
W +L++G
Sbjct: 391 VWGALLNG 398
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFD 122
I ++ +++ ++AK G I A ++F+K+++RN+ SW +I GY ++A+ D
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLD 309
Query: 123 VMPERDNFS------WALMITCYTRKGKLEKARELLE-------LVPDKLDTACWNAVIA 169
+ D ++ C G LE+ R +LE + P +C ++
Sbjct: 310 RIEREDGIKPDSVVLLGVLAAC-AHGGFLEEGRTMLENMEARYGITPKHEHYSC---IVD 365
Query: 170 GYAKKGQFSDAEKVFNLMPVKDLVS-YNSMLAG 201
+ G+ DA + MP+K L S + ++L G
Sbjct: 366 LMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/614 (26%), Positives = 282/614 (45%), Gaps = 69/614 (11%)
Query: 173 KKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSG 232
K G A + F+ M V+D+V+YN +++G N + G +L E AE +VS L S
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISG---NSRYGCSLRAIELYAE--MVSCGLRESA 112
Query: 233 FVNSGDLS-SARQLF--EKIPNPNAVSWVTMLCG-FARHGKI---------TEARRLFDS 279
LS + +LF E I V + C F R + A +LFD
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEA 335
M +N+ N ++ + Q + +++++M K+G+++ +I G + E
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 336 REVYNQMP-----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQ 390
+++++ + +I L+ G + + + FN + +D I WNS+++
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 391 SGRMDEALDLFRQMP---KKNSV----------SWNT----------------------- 414
G + ++LDLF +M K+ S+ S N+
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 415 ----MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
+I Y + ++++ ++Q++ N+ NSL+T + + D ++ LM EG
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEG 412
Query: 471 KKPDQSTFXXXXXXXXXXXXXQV--GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
D+ T + +H +KSGY D+ VS +LI Y K G+ E
Sbjct: 413 TGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEV 472
Query: 529 AEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
+ +VF ++ ++ S+I+GYA NG + K ++M ++PD+VT + +LS CSH
Sbjct: 473 SRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSH 532
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWG 648
+GL +G +F + + I P + Y+C+VDLLGR G +E+A ++ A+ W
Sbjct: 533 SGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWS 592
Query: 649 SLLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKR 708
SLL +CR+H+N IG AA L LEP N + YI +S + E G +E ++R + +
Sbjct: 593 SLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRE 652
Query: 709 AGKLPGCSWIEVQN 722
+ G S + V+N
Sbjct: 653 LMREIGYSSVVVKN 666
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 193/426 (45%), Gaps = 19/426 (4%)
Query: 180 AEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDL 239
A+ ++ L L + L + +M + F E+ V + N + + SG+L
Sbjct: 4 AQALYFLRRTTTLAQHLCSLTPFIATPRMDFS-SFLEENPSDLVYTHNRRIDELIKSGNL 62
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-PC---KNVVSWNAMIAAY 295
SA + F+++ + V++ ++ G +R+G A L+ M C ++ ++ ++++
Sbjct: 63 LSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVC 122
Query: 296 AQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET 351
+ +L E +++ ++ + + ++ Y + +D A +++++M +++A
Sbjct: 123 SDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCN 182
Query: 352 ALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPK- 406
L+ QTG +++ ++ ++ + + MI G + E L + K
Sbjct: 183 LLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKS 242
Query: 407 ----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKS 462
N N ++ Y+ G + + F A+ E++++SWNS+++ D+L
Sbjct: 243 GWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDL 302
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY-INDLFVSNALIAMYA 521
M GK+P F Q G Q+H Y+LK G+ ++ L V +ALI MY
Sbjct: 303 FSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYG 362
Query: 522 KCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
KC +E++ ++ ++ C++L NSL++ G + + F M+ E D+VT
Sbjct: 363 KCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLST 422
Query: 582 MLSACS 587
+L A S
Sbjct: 423 VLKALS 428
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 193/430 (44%), Gaps = 47/430 (10%)
Query: 52 VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN 111
++ RV S N+ ++++ ++A + A +LFD+M RNL N ++ +
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQT 191
Query: 112 SMVEEASKLFDVMPE-------RDNFSWALMITCYTRKGKLEKARELLELVPDK----LD 160
E+ +LF+V ++ ++ MI + + + ++L LV +
Sbjct: 192 G---ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISN 248
Query: 161 TACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-- 218
N ++ Y+ G S + + FN +P KD++S+NS+++ G + +L F KM
Sbjct: 249 IFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQF 308
Query: 219 --AEKNVVSWNLMVSGFVNSGDLSSARQL--------FEKIPNPNAVSWVTMLCGFARHG 268
++ + ++ + D+ S +Q+ F+ + + M + +
Sbjct: 309 WGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDM---YGKCN 365
Query: 269 KITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIIN 324
I + L+ S+PC N+ N+++ + + +++F M + D V+ +T++
Sbjct: 366 GIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLK 425
Query: 325 GYIRVGKLDEAREVYNQMPC--------KDIAAETALMSGLIQTGRVDEASKMFNQLSTR 376
L E+ + C D+A +L+ ++G+ + + K+F++L T
Sbjct: 426 ALSL--SLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTP 483
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIF 432
+ C S+I G+ ++G + + + R+M + N V+ +++SG + +G ++ E IF
Sbjct: 484 NIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIF 543
Query: 433 QAMEERNIVS 442
++E + +S
Sbjct: 544 DSLESKYGIS 553
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 22/280 (7%)
Query: 385 IAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
+ F + RMD + + P + N I ++G + SA F M R++V++N
Sbjct: 23 LTPFIATPRMDFS-SFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYN 81
Query: 445 SLITGFLQNSLYFDALKSLVL---MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
LI+G NS Y +L+++ L M G + STF + G Q+H +
Sbjct: 82 LLISG---NSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRV 138
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAF 561
+ G+ ++FV +AL+ +YA V+ A ++F + +L N L+ + G + F
Sbjct: 139 ISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLF 198
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED-------FAIEPLAEH 614
+ + +M E V + +T+ M+ CSH L +G L +V+ F L ++
Sbjct: 199 EVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDY 258
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
YS DL G M +FN V DV + W S++ C
Sbjct: 259 YSACGDLSGSM----RSFNAVPEKDVIS----WNSIVSVC 290
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 170/389 (43%), Gaps = 65/389 (16%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM- 93
++F N + + G + ++R F+ K+++++NS++SV A G + D+ LF KM
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
Query: 94 ------SQRNLVSWNTMIAGYLHNSMVEEASKL--------FDVMPERDNFSWALMITCY 139
S R +S+ + NS ++ ++ FDV + +I Y
Sbjct: 308 FWGKRPSIRPFMSFLNFCS---RNSDIQSGKQIHCYVLKMGFDVSSLH---VQSALIDMY 361
Query: 140 TRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSY 195
+ +E + L + +P L+ C N+++ G D ++F LM + D V+
Sbjct: 362 GKCNGIENSALLYQSLP-CLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTL 420
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAV 255
+++L L+L E + +V + SG+ + D++ + L +
Sbjct: 421 STVLK--------ALSLSLPESLHSCTLVHCCAIKSGY--AADVAVSCSLID-------- 462
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH-- 313
+ + G+ +R++FD + N+ ++I YA++ + VK+ +M
Sbjct: 463 -------AYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMN 515
Query: 314 --KDGVSWTTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMSGLI----QTGRVDEA 366
D V+ ++++G G ++E +++ + K I+ L + ++ + G V++A
Sbjct: 516 LIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKA 575
Query: 367 SKMFNQL-STRDTICWNSMIAGFCQSGRM 394
++ Q D + W+S++ QS R+
Sbjct: 576 ERLLLQARGDADCVAWSSLL----QSCRI 600
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 201/416 (48%), Gaps = 13/416 (3%)
Query: 314 KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTG----RVDEASKM 369
K + T+I Y+ G+ + ++ M + LI+ V +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 370 FNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQM 425
Q R D S + + + G ++ + +F + V+ N+++ + G+M
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL---KSLVLMGREGKKPDQSTFXXXX 482
D A FQ M ++VSW ++I GF + L+ AL ++ R P+++TF
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 483 XXXXXXXX--XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVD 540
++G Q+H Y++ I + AL+ MY K G +E A +F I
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 541 LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK 600
+ +WN++IS A NG +A + F+ M S V P+ +T + +L+AC+ + L + G+ LF
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 601 CMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVHKNL 660
+ ++ I P +EHY C+VDL+GR G L +A N ++ + + +A + G+LLGAC++H+N
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENT 408
Query: 661 EIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCS 716
E+G +L L+P + Y+ LS +A W E E++R M + K+P S
Sbjct: 409 ELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 25/269 (9%)
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLM--------VSGFVNSGDLSSARQLF 246
YN+++ Y G+ +L F M +V NL S F S ++ Q
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 247 EKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM--PCKNVVSWNAMIAAYAQDLQIDEA 304
++ + + + + G + +R++FD + PC VV+ N+++ A ++ ++D A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPC--VVACNSLLDACGRNGEMDYA 171
Query: 305 VKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAA----ETALMSGLIQT 360
+ F +MP D VSWTT+ING+ + G +A V+ +M + A E +S L
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 361 GRVDEAS-----KMFNQLSTRDTICWNSMIAG----FCQSGRMDEALDLFRQMPKKNSVS 411
D+ ++ + +++ I ++ + ++G ++ AL +F Q+ K +
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 412 WNTMISGYAQAGQMDSAENIFQAMEERNI 440
WN +IS A G+ A +F+ M+ +
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYV 320
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 111/226 (49%), Gaps = 16/226 (7%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
S + + + G + +R++FD + +V+ N+++ N ++ A + F MP D
Sbjct: 125 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 184
Query: 131 SWALMITCYTRKGKLEKARELL-ELVPDK-----LDTACWNAVIAGYAK--KGQFSDAEK 182
SW +I +++KG KA + E++ ++ + A + +V++ A +G ++
Sbjct: 185 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQ 244
Query: 183 VFNLMPVKDLVSYNSMLAG----YTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD 238
+ + K+++ ++ Y + G + +AL F+++ +K V +WN ++S ++G
Sbjct: 245 IHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGR 304
Query: 239 LSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSM 280
A ++FE + +PN ++ + +L AR + +LF S+
Sbjct: 305 PKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 55/297 (18%)
Query: 101 WNTMIAGYLHNSMVEEASKLFD------VMPERDNFSWALMITCYTRKGKLEKARELLEL 154
+NT+I YL + + LF V P F + C + A L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 155 VPDKL-DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALH 213
L D + + Y + G + K+F+ + +V+ NS+L +NG+M A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 214 FFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLF-EKIPN------PNAVSWVTML--CG- 263
+F++M +VVSW +++GF G + A +F E I N PN ++V++L C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 264 ----------------------------------FARHGKITEARRLFDSMPCKNVVSWN 289
+ + G + A +FD + K V +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 290 AMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
A+I+A A + + +A+++F M H +G++ I+ R +D ++++ +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 25/258 (9%)
Query: 47 GKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
G++G +E + ++F + ++ +V NS++ +NG++ A + F +M ++VSW T+I
Sbjct: 132 GEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVIN 191
Query: 107 GYLHNSMVEEASKLFDVM---------PERDNFSWALMITCYTRKGKLEKARELLELVPD 157
G+ + +A +F M P F L +G + +++ V
Sbjct: 192 GFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMS 251
Query: 158 K---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHF 214
K L T A++ Y K G A +F+ + K + ++N++++ NG+ AL
Sbjct: 252 KEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEM 311
Query: 215 FEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEK-------IPNPNAVSWVTMLCG 263
FE M N ++ +++ S + QLF IP V L G
Sbjct: 312 FEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIG 371
Query: 264 FARHGKITEARRLFDSMP 281
R G + +A S+P
Sbjct: 372 --RAGLLVDAANFIQSLP 387
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 181/342 (52%), Gaps = 16/342 (4%)
Query: 413 NTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQN---SLYFDALKSLVLMGRE 469
N +I Y + A +F M ERN+VSWNS++T ++N +L F+ ++
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI----- 206
Query: 470 GKK--PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
GK+ PD++T +G +H ++ + + AL+ MYAK G +E
Sbjct: 207 GKRFCPDETTMVVLLSACGGNL--SLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 528 SAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV-PDQVTFIGMLSAC 586
A VF + ++ +W+++I G A G+A EA + F +M+ E V P+ VTF+G+L AC
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
SH GL + G F M + I+P+ HY +VD+LGR GRL EA++ ++ M + +A +
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 647 WGSLLGACRVHKNLE---IGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVL 703
W +LL AC +H + + IGE RL ELEP + N + ++N AEA W E +R +
Sbjct: 385 WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRV 444
Query: 704 MRDKRAGKLPGCSWIEVQNQIQCFLSDDSGRLRPETIQIILN 745
M++ + K+ G S +E+ F S R +I +L+
Sbjct: 445 MKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLD 486
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 188/434 (43%), Gaps = 75/434 (17%)
Query: 34 KHVFNKNQQIIHLGKLGK----VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQL 89
KH+ + QI HL L + E VRV S ++ K+L AR L
Sbjct: 27 KHLLQIHGQI-HLSSLQNDSFIISELVRVSSLSLAKDLAF----------------ARTL 69
Query: 90 FDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCYTRKG 143
S +WN + GY + E+ ++ M P + F + L+ C + G
Sbjct: 70 LLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPF-LLKACASFLG 128
Query: 144 KLEKAREL-LELVPDKLDTACW--NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLA 200
L R++ +E++ D + N +I Y + SDA KVF+ M +++VS+NS++
Sbjct: 129 -LTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMT 187
Query: 201 GYTQNGKMGLALHFFEKMAEKNVVS--WNLMVSGFVNSGDLSSAR----QLFEKIPNPNA 254
+NGK+ L F +M K ++V G+LS + Q+ + N
Sbjct: 188 ALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNC 247
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK 314
++ +A+ G + AR +F+ M KNV +W+AMI AQ +EA++LF KM +
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 315 DGV--SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQ 372
V ++ T + ++ TG VD+ K F++
Sbjct: 308 SSVRPNYVTFL----------------------------GVLCACSHTGLVDDGYKYFHE 339
Query: 373 LSTRDTI-----CWNSMIAGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMD 426
+ I + +M+ ++GR++EA D ++MP + ++V W T++S + D
Sbjct: 340 MEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDED 399
Query: 427 SAENIFQAMEERNI 440
E I + +++R I
Sbjct: 400 D-EGIGEKVKKRLI 412
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 4/236 (1%)
Query: 416 ISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
+S + A + A + + +WN L G+ + +++ M R G KP++
Sbjct: 54 VSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNK 113
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA 535
TF G Q+ +LK G+ D++V N LI +Y C + A +VF
Sbjct: 114 LTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDE 173
Query: 536 IECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQG 595
+ +++SWNS+++ NG F+ F +M+ + PD+ T + +LSAC L+
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG-GNLSLGK 232
Query: 596 LDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
L + MV + + + LVD+ + G LE A V M V N W +++
Sbjct: 233 LVHSQVMVRELELN--CRLGTALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMI 285
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 24/239 (10%)
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRL---- 276
+WN++ G+ +S + ++ ++ PN +++ +L A +T R++
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 277 ----FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKL 332
FD +V N +I Y + +A K+F +M ++ VSW +I+ + GKL
Sbjct: 140 LKHGFDF----DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195
Query: 333 DEAREVYNQMP----CKDIAAETALMS---GLIQTGRVDEASKMFNQLSTRDTICWNSMI 385
+ E + +M C D L+S G + G++ + M +L + +++
Sbjct: 196 NLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRL-GTALV 254
Query: 386 AGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWN 444
+ +SG ++ A +F +M KN +W+ MI G AQ G + A +F M + + V N
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 161/628 (25%), Positives = 271/628 (43%), Gaps = 87/628 (13%)
Query: 65 KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVM 124
KN + I +FA+ + A + D + QR + T S L +
Sbjct: 74 KNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTF------------SALLEAC 121
Query: 125 PERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVF 184
R + + + R LE + E L + TAC G DA+KVF
Sbjct: 122 VRRKSLLHGKQVHVHIRINGLE-SNEFLRTKLVHMYTAC-----------GSVKDAQKVF 169
Query: 185 NLMPVKDLVSYNSMLAGYTQNGKMGL--ALHFFEKMAEK----NVVSWNLMVSGFVNSGD 238
+ ++ S+N++L G +GK L F +M E NV S + + F +
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229
Query: 239 LSSARQLFE-KIPNP--NAVSWVTMLCG-FARHGKITEARRLFDSMPCKNVVSWNAMIAA 294
L + I N N+V T L + + GK+ ARR+FD + +++V W AMIA
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG 289
Query: 295 YAQDLQIDEAVKLFIKMP-----HKDGVSWTTIINGYIRVGKLDEAREVYNQ-MPCKDIA 348
A + + EA+ LF M + + V TTI+ V L +EV+ + K+
Sbjct: 290 LAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYV 349
Query: 349 AETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEAL------ 398
+ + SGLI + G + ++F R+ I W ++++G+ +GR D+AL
Sbjct: 350 EQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWM 409
Query: 399 --DLFRQ---------------------------------MPKKNSVSWNTMISGYAQAG 423
+ FR +P + V+ +++ Y++ G
Sbjct: 410 QQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVT--SLMVMYSKCG 467
Query: 424 QMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
+ +F +E+RN+ +W ++I +++N ++ LM +PD T
Sbjct: 468 VPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLT 527
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLIS 543
++G +LH +ILK + + FVS +I MY KCG + SA F A+ ++
Sbjct: 528 VCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLT 587
Query: 544 WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV 603
W ++I Y N +A F+QM+S P+ TF +LS CS AG ++ F M+
Sbjct: 588 WTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLML 647
Query: 604 EDFAIEPLAEHYSCLVDLLGRMGRLEEA 631
+ ++P EHYS +++LL R GR+EEA
Sbjct: 648 RMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 187/406 (46%), Gaps = 33/406 (8%)
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKL 120
N + ++ S++ ++ K GK+ AR++FD++ +R++V W MIAG HN EA L
Sbjct: 243 NGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGL 302
Query: 121 FDVMPERDNF--SWALMITCYTRKGKLEKARELLELVPDKLDTACW-------NAVIAGY 171
F M + + ++ T G ++ + E+ L + + + +I Y
Sbjct: 303 FRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLY 362
Query: 172 AKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWN 227
K G + +VF ++ +S+ ++++GY NG+ AL M ++ +VV+
Sbjct: 363 CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIA 422
Query: 228 LMVSGFVNSGDLSSARQL----FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
++ + +++ + + PN +++ +++ G RLFD + +
Sbjct: 423 TVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR 482
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKM---PHK-DGVSWTTIINGYIRVGKLDEAREVY 339
NV +W AMI Y ++ + +++F M H+ D V+ ++ + L +E++
Sbjct: 483 NVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELH 542
Query: 340 NQMPCKD------IAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
+ K+ ++A M G + G + A+ F+ ++ + ++ W ++I + +
Sbjct: 543 GHILKKEFESIPFVSARIIKMYG--KCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNEL 600
Query: 394 MDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM 435
+A++ F QM + N+ ++ ++S +QAG +D A F M
Sbjct: 601 FRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/549 (19%), Positives = 228/549 (41%), Gaps = 77/549 (14%)
Query: 56 VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYL------ 109
V + N + N ++ ++ G + DA+++FD+ + N+ SWN ++ G +
Sbjct: 135 VHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKR 194
Query: 110 HNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAV-- 167
+ ++ +++ ++ + + +S + + + L R+ L+ + +N+V
Sbjct: 195 YQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASAL---RQGLKTHALAIKNGLFNSVFL 251
Query: 168 ----IAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
+ Y K G+ A +VF+ + +D+V + +M+AG N + AL F M +
Sbjct: 252 KTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEK 311
Query: 224 VSWN-------LMVSGFVNS---GDLSSARQLFEK--IPNPNAVSWVTMLCGFARHGKIT 271
+ N L V G V + G A L K + P S + L + + G +
Sbjct: 312 IYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDL--YCKCGDMA 369
Query: 272 EARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYI 327
RR+F +N +SW A+++ YA + + D+A++ + M + D V+ T++
Sbjct: 370 SGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCA 429
Query: 328 RVGKLDEAREVY----NQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNS 383
+ + + +E++ + +++ T+LM + G + ++F++L R+ W +
Sbjct: 430 ELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTA 489
Query: 384 MIAGFCQSGRMDEALDLFRQM----PKKNSVSWN-------------------------- 413
MI + ++ + +++FR M + +SV+
Sbjct: 490 MIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKE 549
Query: 414 ---------TMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLV 464
+I Y + G + SA F A+ + ++W ++I + N L+ DA+
Sbjct: 550 FESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFE 609
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNAL-IAMYAKC 523
M G P+ TF + +L+ + +L I + +C
Sbjct: 610 QMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRC 669
Query: 524 GRVESAEQV 532
GRVE A+++
Sbjct: 670 GRVEEAQRL 678
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 144/346 (41%), Gaps = 56/346 (16%)
Query: 48 KLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAG 107
KLGK A + S + ++ +I ++ K G ++ R++F QRN +SW +++G
Sbjct: 333 KLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSG 392
Query: 108 YLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLDTAC 163
Y N ++A + M + D + A ++ +++ +E
Sbjct: 393 YAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE------------- 439
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV 223
I YA K F +P LV+ S++ Y++ G + F+++ ++NV
Sbjct: 440 ----IHCYALKNLF---------LPNVSLVT--SLMVMYSKCGVPEYPIRLFDRLEQRNV 484
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKI------PNPNAVSWVTMLC--------GFARHGK 269
+W M+ +V + DL + ++F + P+ + V +C G HG
Sbjct: 485 KAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGH 544
Query: 270 ITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRV 329
I ++ F+S+P + +I Y + + A F + K ++WT II Y
Sbjct: 545 IL--KKEFESIPFVSA----RIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCN 598
Query: 330 GKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFN 371
+A + QM + TA++S Q G VDEA + FN
Sbjct: 599 ELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFN 644
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 189/373 (50%), Gaps = 23/373 (6%)
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYI 327
G+ A +F+ + + +WN MI + + + + EA+ LFI M +I+
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILM----------MISHQS 115
Query: 328 RVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAG 387
+ K + + I T + I+ G FN D N+++
Sbjct: 116 QFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAG-------FFN-----DVFFQNTLMDL 163
Query: 388 FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLI 447
+ + G+ D +F +MP ++ VSW TM+ G Q+DSAE +F M RN+VSW ++I
Sbjct: 164 YFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMI 223
Query: 448 TGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI 507
T +++N +A + M + KP++ T +G +H+Y K+G++
Sbjct: 224 TAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFV 283
Query: 508 NDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQM 567
D F+ ALI MY+KCG ++ A +VF ++ L +WNS+I+ ++G EA F++M
Sbjct: 284 LDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEM 343
Query: 568 LSEEVV-PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
E V PD +TF+G+LSAC++ G GL F M++ + I P+ EH +C++ LL +
Sbjct: 344 EEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQAL 403
Query: 627 RLEEAFNVVRGMD 639
+E+A N+V MD
Sbjct: 404 EVEKASNLVESMD 416
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 166/370 (44%), Gaps = 40/370 (10%)
Query: 83 ISDARQLFDKMSQRNLVSWNTMIAGYLHNSM----VEEASKLFDVMPERDNFSWALMITC 138
S +Q+ K+ + NL + ++ + S + AS +F+ + F+W LMI
Sbjct: 33 FSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRS 92
Query: 139 YTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
+ K RE L L ++ + + QF +K +K ++ +S+
Sbjct: 93 LSVN---HKPREALLLF-----------ILMMISHQSQF---DKFTFPFVIKACLASSSI 135
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV 258
G TQ + + FF +V N ++ + G S R++F+K+P + VSW
Sbjct: 136 RLG-TQVHGLAIKAGFF-----NDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWT 189
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD--- 315
TML G + ++ A +F+ MP +NVVSW AMI AY ++ + DEA +LF +M D
Sbjct: 190 TMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP 249
Query: 316 -GVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMF 370
+ ++ ++G L R V++ D TAL+ + G + +A K+F
Sbjct: 250 NEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVF 309
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP-----KKNSVSWNTMISGYAQAGQM 425
+ + + WNSMI G +EAL LF +M + +++++ ++S A G +
Sbjct: 310 DVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNV 369
Query: 426 DSAENIFQAM 435
F M
Sbjct: 370 KDGLRYFTRM 379
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 16/247 (6%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISV 76
I++ + H L I + VF +N + K GK + +VF +++V++ +M+
Sbjct: 135 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 194
Query: 77 FAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF------DVMPERDNF 130
N ++ A +F++M RN+VSW MI Y+ N +EA +LF DV P + F
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP--NEF 252
Query: 131 SWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLM 187
+ ++ T+ G L R + + LD A+I Y+K G DA KVF++M
Sbjct: 253 TIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM 312
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKM-----AEKNVVSWNLMVSGFVNSGDLSSA 242
K L ++NSM+ +G AL FE+M E + +++ ++S N+G++
Sbjct: 313 QGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Query: 243 RQLFEKI 249
+ F ++
Sbjct: 373 LRYFTRM 379
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 415 MISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMG-REGKKP 473
+IS + G+ A +F ++ + +WN +I N +AL +LM +
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR-------- 525
D+ TF ++G Q+H +K+G+ ND+F N L+ +Y KCG+
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 526 -----------------------VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFK 562
++SAE VF + +++SW ++I+ Y N EAF+
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 237
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEP--LAEHY--SCL 618
F++M ++V P++ T + +L A + G + G V D+A + + + + + L
Sbjct: 238 LFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGR-----WVHDYAHKNGFVLDCFLGTAL 292
Query: 619 VDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGACRVH 657
+D+ + G L++A V M K+ A W S++ + VH
Sbjct: 293 IDMYSKCGSLQDARKVFDVMQGKSLAT-WNSMITSLGVH 330
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 141/341 (41%), Gaps = 61/341 (17%)
Query: 63 IHKNLVTYN---------SMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSM 113
IH ++ +N +ISV + G+ A +F+++ + +WN MI N
Sbjct: 39 IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHK 98
Query: 114 VEEASKLFDVM-----PERDNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWN 165
EA LF +M + D F++ +I + ++ L D N
Sbjct: 99 PREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQN 158
Query: 166 AVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS 225
++ Y K G+ KVF+ MP + +VS+ +ML G N ++ A F +M +NVVS
Sbjct: 159 TLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVS 218
Query: 226 WNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCG------------------ 263
W M++ +V + A QLF ++ PN + V +L
Sbjct: 219 WTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAH 278
Query: 264 -----------------FARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
+++ G + +AR++FD M K++ +WN+MI + +EA+
Sbjct: 279 KNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALS 338
Query: 307 LFIKMP-----HKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
LF +M D +++ +++ G + + + +M
Sbjct: 339 LFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 225/481 (46%), Gaps = 63/481 (13%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV 224
N +I+ + G A KVF+ MP K+ V++ +M+ GY + G A FE + +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 225 SWNLMVSGFVNSGDLSSARQLFE----------KIPNPNAVSWVTMLCGFARHGKITEAR 274
N + FV +L S R FE K+ N + +++ +A+ G++T A
Sbjct: 181 FTNERM--FVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSAL 238
Query: 275 RLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM------PHKDGVSWTTIINGYIR 328
R FD M K+V+SW A+I+A ++ +A+ +FI M P++ V +I+
Sbjct: 239 RAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTV--CSILKACSE 296
Query: 329 VGKLDEAREVYN----QMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSM 384
L R+V++ +M D+ T+LM + G + + K+F+ +S R+T+ W S+
Sbjct: 297 EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSI 356
Query: 385 IAGFCQSGRMDEALDLFRQMPK----------------------------------KNSV 410
IA + G +EA+ LFR M + KNS+
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 411 SWNTMISG-----YAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVL 465
N I Y + G+ A N+ Q + R++VSW ++I+G +AL L
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
M +EG +P+ T+ +G +H K+ ++++FV +ALI MYAKCG
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 526 VESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
V A +VF ++ +L+SW ++I GYA NG+ EA K +M +E D F +LS
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Query: 586 C 586
C
Sbjct: 597 C 597
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 217/473 (45%), Gaps = 68/473 (14%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLF-DVMPERDN 129
N++IS + G + AR++FD M ++N V+W MI GYL + +EA LF D +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 130 FSWALMITCY----TRKGKLEKARELLELVPDKLDTACWNAVIAG-----YAKKGQFSDA 180
F+ M C +R+ + E R++ + + N ++ YA+ G+ + A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVH---GNMVKVGVGNLIVESSLVYFYAQCGELTSA 237
Query: 181 EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGD-- 238
+ F++M KD++S+ ++++ ++ G A+ F M + V + +
Sbjct: 238 LRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEE 297
Query: 239 --LSSARQ----LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMI 292
L RQ + +++ + +++ +A+ G+I++ R++FD M +N V+W ++I
Sbjct: 298 KALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSII 357
Query: 293 AAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA 348
AA+A++ +EA+ LF M + + ++ +I+ VG L +E++ Q+ I
Sbjct: 358 AAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIE 417
Query: 349 AETALMSGLI----QTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
+ S L+ + G +A + QL +RD + W +MI+G G EALD ++M
Sbjct: 418 KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEM 477
Query: 405 ----------------------------------PKKNSVSWNT-----MISGYAQAGQM 425
KKN N +I YA+ G +
Sbjct: 478 IQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFV 537
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
A +F +M E+N+VSW ++I G+ +N +ALK + M EG + D F
Sbjct: 538 SEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIF 590
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 190/444 (42%), Gaps = 57/444 (12%)
Query: 266 RHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWT----- 320
R G + AR++FDSMP KN V+W AMI Y + DEA LF K G+ +T
Sbjct: 129 RLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYV-KHGIRFTNERMF 187
Query: 321 -TIINGYIRVGKLDEAREVYNQM---PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR 376
++N R + + R+V+ M ++ E++L+ Q G + A + F+ + +
Sbjct: 188 VCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEK 247
Query: 377 DTICWNSMIAGFCQSGRMDEALDLF----------------------------------- 401
D I W ++I+ + G +A+ +F
Sbjct: 248 DVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVH 307
Query: 402 ----RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYF 457
++M K + +++ YA+ G++ +F M RN V+W S+I +
Sbjct: 308 SLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGE 367
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
+A+ +M R + T +G +LH I+K+ ++++ + L+
Sbjct: 368 EAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLV 427
Query: 518 AMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
+Y KCG A V + D++SW ++ISG + G+ EA K+M+ E V P+
Sbjct: 428 WLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPF 487
Query: 578 TFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRG 637
T+ L AC+++ G + ++ A+ + S L+ + + G + EAF V
Sbjct: 488 TYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKCGFVSEAFRVFDS 546
Query: 638 MDVKANAGLWGSLL------GACR 655
M K N W +++ G CR
Sbjct: 547 MPEK-NLVSWKAMIMGYARNGFCR 569
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 160/341 (46%), Gaps = 10/341 (2%)
Query: 322 IINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICW 381
+I+ +R+G L AR+V++ MP K+ TA++ G ++ G DEA +F
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 382 NS-MIAGFCQSGRMDEALDLFRQMPKK-------NSVSWNTMISGYAQAGQMDSAENIFQ 433
N M +L RQ+ N + ++++ YAQ G++ SA F
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFD 242
Query: 434 AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
MEE++++SW ++I+ + A+ + M P++ T +
Sbjct: 243 MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRF 302
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYAL 553
G Q+H ++K D+FV +L+ MYAKCG + +VF + + ++W S+I+ +A
Sbjct: 303 GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G+ EA F+ M ++ + +T + +L AC G G +L ++++ +IE
Sbjct: 363 EGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVY 421
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGAC 654
S LV L + G +AFNV++ + + + W +++ C
Sbjct: 422 IGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGC 461
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 155/299 (51%), Gaps = 20/299 (6%)
Query: 58 VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEA 117
V I ++ S++ ++AK G+ISD R++FD MS RN V+W ++IA + EEA
Sbjct: 310 VVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEA 369
Query: 118 SKLFDVMPERDNFSWALMITCYTRK----GKLEKAREL-LELVPDKLDTACW--NAVIAG 170
LF +M R + L + R G L +EL +++ + ++ + + ++
Sbjct: 370 ISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWL 429
Query: 171 YAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSW 226
Y K G+ DA V +P +D+VS+ +M++G + G AL F ++M E N ++
Sbjct: 430 YCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTY 489
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNPNAVSWV----TMLCGFARHGKITEARRLFDSMPC 282
+ + NS L R + +A+S V ++ +A+ G ++EA R+FDSMP
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEARE 337
KN+VSW AMI YA++ EA+KL +M + D + TI++ + +LDEA E
Sbjct: 550 KNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI-ELDEAVE 607
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 176/363 (48%), Gaps = 25/363 (6%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
NL+ +S++ +A+ G+++ A + FD M +++++SW +I+ +A +F M
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 126 ER----DNFSWALMITCYTRKGKLEKARELLELVPDKL---DTACWNAVIAGYAKKGQFS 178
+ F+ ++ + + L R++ LV ++ D +++ YAK G+ S
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNS-- 236
D KVF+ M ++ V++ S++A + + G A+ F M +++++ NL V + +
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG 396
Query: 237 --GDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNA 290
G L ++L +I N T++ + + G+ +A + +P ++VVSW A
Sbjct: 397 SVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTA 456
Query: 291 MIAAYAQDLQIDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYN----Q 341
MI+ + EA+ F+K ++GV ++++ + L R +++
Sbjct: 457 MISGCSSLGHESEALD-FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKN 515
Query: 342 MPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLF 401
++ +AL+ + G V EA ++F+ + ++ + W +MI G+ ++G EAL L
Sbjct: 516 HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLM 575
Query: 402 RQM 404
+M
Sbjct: 576 YRM 578
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/656 (22%), Positives = 300/656 (45%), Gaps = 83/656 (12%)
Query: 43 IIHLGKLGKVEEAVRVFS----NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ--- 95
I LGK G+V A +F+ + ++ +Y S+IS FA +G+ +A +F KM +
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 96 -RNLVSWNTMI-----AGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAR 149
L+++N ++ G N + K+ D +++ +ITC R ++A
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299
Query: 150 ELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGY 202
++ E + D +NA++ Y K + +A KV N M + +V+YNS+++ Y
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 203 TQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNA 254
++G + A+ +MAEK +V ++ ++SGF +G + SA +FE++ N PN
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
++ + + GK TE ++FD + ++V+WN ++A + Q+ E +F +
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 311 M------PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVD 364
M P ++ ++ T+I+ Y R G ++A VY +M L +G+
Sbjct: 480 MKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRM----------LDAGV------- 520
Query: 365 EASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYA 420
T D +N+++A + G +++ + +M K N +++ +++ YA
Sbjct: 521 ----------TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 421 ---QAGQMDS-AENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
+ G M S AE ++ + E V +L+ + L +A ++ + G PD +
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T N + +Y+ + G+ + N+L+ M+++ +E++ I
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 537 EC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
D+IS+N++I Y N +A + F +M + +VPD +T+ + + + +
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAG 645
+ + + + M++ P Y+ +VD ++ R +EA +R +D A G
Sbjct: 751 EEAIGVVRYMIKH-GCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKG 805
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 192/415 (46%), Gaps = 54/415 (13%)
Query: 264 FARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDG--- 316
+ G+++ A +F+ + +V S+ ++I+A+A + EAV +F KM +DG
Sbjct: 183 LGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM-EEDGCKP 241
Query: 317 --VSWTTIINGYIRVGKL-DEAREVYNQMPCKDIAAETALMSGLIQTGRV----DEASKM 369
+++ I+N + ++G ++ + +M IA + + LI + EA+++
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQV 301
Query: 370 FNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQM 425
F ++ + D + +N+++ + +S R EA+ + +M +++G++ +
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM----------VLNGFSPS--- 348
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
IV++NSLI+ + ++ + +A++ M +G KPD T+
Sbjct: 349 --------------IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DL 541
+ + E + +G ++ NA I MY G+ ++F I D+
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKC 601
++WN+L++ + NG E FK+M VP++ TF ++SA S G Q + +++
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRR 514
Query: 602 MVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLWGSLLGA 653
M+ D + P Y+ ++ L R G E++ V+ M+ K N + SLL A
Sbjct: 515 ML-DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 168/416 (40%), Gaps = 78/416 (18%)
Query: 353 LMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSW 412
++S L + GRV A+ MFN L GF +LD++ S+
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQE----------DGF--------SLDVY---------SY 211
Query: 413 NTMISGYAQAGQMDSAENIFQAMEE----RNIVSWNSLITGFLQNSLYFDALKSLV-LMG 467
++IS +A +G+ A N+F+ MEE ++++N ++ F + ++ + SLV M
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 468 REGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
+G PD T+ Q Q+ E + +G+ D NAL+ +Y K R +
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 528 SAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
A +V + ++++NSLIS YA +G EA + QM + PD T+ +L
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDV--- 640
S AG + +F+ M + +P ++ + + G G+ E + ++V
Sbjct: 392 SGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 641 KANAGLWGSLLGACRVHK-NLEI-GEFAAMRLSELEPH---------------------- 676
+ W +LL + + E+ G F M+ + P
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 677 ------------NASNYITLSNMHAEAGRWEEVERLRVLMRDKR--AGKLPGCSWI 718
+ S Y T+ A G WE+ E++ M D R +L CS +
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 235/463 (50%), Gaps = 53/463 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEASKLF 121
N +T++++I+ G++S+A +L D+M + +L++ NT++ G + EA L
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 122 DVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKK 174
D M E + ++ ++ + G+ A ELL + + KLD ++ +I G K
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 175 GQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSW 226
G +A +FN M +K ++++YN ++ G+ G+ M ++ NVV++
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
++++ FV G L A +L +++ + P+ +++ +++ GF + + +A ++ D M
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 283 K----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDE 334
K N+ ++N +I Y + +ID+ ++LF KM + D V++ T+I G+ +GKL+
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 335 AREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIA 386
A+E++ +M + +I L+ GL G ++A ++F ++ D +N +I
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 387 GFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV- 441
G C + ++D+A DLF +P K ++N MI G + G + AE +F+ MEE
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 442 ---SWNSLITGFLQNSLYFDALKSLVL---MGREGKKPDQSTF 478
++N LI L + DA KS+ L + R G D ST
Sbjct: 577 DGWTYNILIRAHLGDG---DATKSVKLIEELKRCGFSVDASTI 616
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 229/495 (46%), Gaps = 41/495 (8%)
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSAR 243
P+ ++ ++ + + + + L L ++M K N+ + ++M++ F L A
Sbjct: 84 PLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF 143
Query: 244 QLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM------PCKNVVSWNAMIA 293
KI PN +++ T++ G G+++EA L D M P ++++ N ++
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP--DLITINTLVN 201
Query: 294 AYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
+ EA+ L KM + V++ ++N + G+ A E+ +M ++I
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 350 E----TALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLF 401
+ + ++ GL + G +D A +FN++ T + I +N +I GFC +GR D+ L
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 402 RQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQN 453
R M K+ N V+++ +I + + G++ AE + + M R I +++ SLI GF +
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
+ A + + LM +G P+ TF G +L + G + D
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 514 NALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLS 569
N LI + + G++ A+++F + +++++ L+ G NG + +A + F+++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 570 EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLE 629
++ D + ++ +A + DLF C + ++P + Y+ ++ L + G L
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLF-CSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 630 EAFNVVRGMDVKANA 644
EA + R M+ +A
Sbjct: 561 EAELLFRKMEEDGHA 575
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 168/353 (47%), Gaps = 50/353 (14%)
Query: 13 ENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNT----IHKNLV 68
E IK+ ++K+ + I L K G ++ A +F+ I N++
Sbjct: 255 EERNIKLDAVKYSIIIDG---------------LCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVM 124
TYN +I F G+ D +L M +R N+V+++ +I ++ + EA +L M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 125 PER----DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQF 177
R D ++ +I + ++ L+KA ++++L+ K + +N +I GY K +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 178 SDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLM 229
D ++F M ++ D V+YN+++ G+ + GK+ +A F++M + N+V++ ++
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 230 VSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKITEARRLFDSMPCK-- 283
+ G ++G+ A ++FEKI + + ++ G K+ +A LF S+P K
Sbjct: 480 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 284 --NVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVG 330
V ++N MI + + EA LF KM DG ++ +I ++ G
Sbjct: 540 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 203/451 (45%), Gaps = 72/451 (15%)
Query: 18 KMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTI----HKNLVTYNSM 73
+M M HK + +I N + L GK EA+ + + N VTY +
Sbjct: 183 RMVEMGHKPDLITI--------NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 74 ISVFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLFDVMPER-- 127
++V K+G+ + A +L KM +RN+ V ++ +I G + ++ A LF+ M +
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 128 --DNFSWALMITCYTRKGKLEKARELL-ELVPDKL--DTACWNAVIAGYAKKGQFSDAEK 182
+ ++ ++I + G+ + +LL +++ K+ + ++ +I + K+G+ +AE+
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 183 VFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFV 234
+ M D ++Y S++ G+ + + A + M K N+ ++N++++G+
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 235 NSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVV 286
+ + +LF K+ + V++ T++ GF GK+ A+ LF M + N+V
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQM 342
++ ++ + + ++A+++F K+ D + II+G K+D+A +++ +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 343 PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFR 402
P K V K +N MI G C+ G + EA LFR
Sbjct: 535 PLKG----------------VKPGVKTYN-----------IMIGGLCKKGPLSEAELLFR 567
Query: 403 QMPKKNSVS--WNTMISGYAQAGQMDSAENI 431
+M + W I A G D+ +++
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 264/524 (50%), Gaps = 55/524 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L ++G VE A V+ + N+ T N M++ K+GK+ ++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
+ ++V++NT+I+ Y ++EEA +L + MP + +++ +I + GK E+
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 148 ARELL-ELVPDKL--DTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLA 200
A+E+ E++ L D+ + +++ KKG + EKVF+ M V DLV ++SM++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 201 GYTQNGKMGLALHFFEKMAEKNVVS----WNLMVSGFVNSGDLSSARQLFEKIPNP---- 252
+T++G + AL +F + E ++ + +++ G+ G +S A L ++
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLF 308
+ V++ T+L G + + EA +LF+ M + + + +I + + + A++LF
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 309 IKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI----AAETALMSGLIQT 360
KM K D V++ T+++G+ +VG +D A+E++ M K+I + + L++ L
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 361 GRVDEASKMFNQLSTRDT-----ICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVS 411
G + EA ++++++ +++ IC NSMI G+C+SG + +M + + +S
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMIC-NSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 412 WNTMISGYAQAGQMDSAENIFQAMEER------NIVSWNSLITGFLQNSLYFDALKSLVL 465
+NT+I G+ + M A + + MEE ++ ++NS++ GF + + +A L
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
M G PD+ST+ ++H+ +L+ G+ D
Sbjct: 683 MIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/598 (20%), Positives = 267/598 (44%), Gaps = 73/598 (12%)
Query: 59 FSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVS------------------ 100
F N H +L + ++MI + ++G++SDA+ +M +R+ VS
Sbjct: 106 FPNFKHTSL-SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSN 164
Query: 101 ---WNTMIAGYLHNSMVEEASKLFDVMPERDNFSWAL-----MITCYTRKGKLEKARELL 152
++ +I Y+ + EA + F ++ + F+ ++ +I R G +E A +
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSK-GFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 153 ELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQN 205
+ + ++ N ++ K G+ + + K D+V+YN++++ Y+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 206 GKMGLALHFFEKMAEKN----VVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSW 257
G M A M K V ++N +++G G A+++F ++ +P++ ++
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNVVS----WNAMIAAYAQDLQIDEAVKLFIKMPH 313
++L + G + E ++F M ++VV +++M++ + + +D+A+ F +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 314 ----KDGVSWTTIINGYIRVGKLDEAREVYNQM---PCK-DIAAETALMSGLIQTGRVDE 365
D V +T +I GY R G + A + N+M C D+ ++ GL + + E
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 366 ASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMIS 417
A K+FN+++ R D+ +I G C+ G + A++LF++M +K + V++NT++
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 418 GYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
G+ + G +D+A+ I+ M + I +S++ L+ +A + M + KP
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
G E ++ G++ D N LI + + + A +
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 534 TAIE------CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+E D+ ++NS++ G+ EA ++M+ V PD+ T+ M++
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 129/558 (23%), Positives = 244/558 (43%), Gaps = 88/558 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPE 126
N++I + G + A ++ ++S+ N+ + N M+ + +E+ + E
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 127 R----DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSD 179
+ D ++ +I+ Y+ KG +E+A EL+ +P K +N VI G K G++
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 180 AEKVF------NLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVS----WNLM 229
A++VF L P D +Y S+L + G + F M ++VV ++ M
Sbjct: 324 AKEVFAEMLRSGLSP--DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 230 VSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM---PC 282
+S F SG+L A F + P+ V + ++ G+ R G I+ A L + M C
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 283 K-NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEARE 337
+VV++N ++ + + EA KLF +M + D + T +I+G+ ++G L A E
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 338 VYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRD----TICWNSMIAGFC 389
++ +M K D+ L+ G + G +D A +++ + +++ I ++ ++ C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 390 QSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAMEERNIV---- 441
G + EA ++ +M KN + N+MI GY ++G E+ + M V
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
S+N+LI GF++ A + M E
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEE-------------------------------- 649
Query: 502 LKSGYINDLFVSNALIAMYAKCGRVESAEQVFTA-IE---CVDLISWNSLISGYALNGYA 557
+ G + D+F N+++ + + +++ AE V IE D ++ +I+G+
Sbjct: 650 -QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 558 IEAFKAFKQMLSEEVVPD 575
EAF+ +ML PD
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 162/406 (39%), Gaps = 72/406 (17%)
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK------NVVSWNAMIAAYAQDLQIDEA 304
NP AV V C +T +R D + +S +AMI + ++ +A
Sbjct: 77 NPLAVVEVLYRC----RNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDA 132
Query: 305 VKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVD 364
++M + GVS I+N LD ++ D + L+ +Q ++
Sbjct: 133 QSCLLRMIRRSGVSRLEIVNS------LDST---FSNCGSNDSVFD-LLIRTYVQARKLR 182
Query: 365 EASKMFNQLSTRDTI----CWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMI 416
EA + F L ++ N++I + G ++ A +++++ + N + N M+
Sbjct: 183 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 242
Query: 417 SGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKK 472
+ + G+M+ ++E+ +IV++N+LI+ + L +A + + M +G
Sbjct: 243 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 302
Query: 473 PDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQV 532
P T+ N +I K G+ E A++V
Sbjct: 303 PGVYTY-----------------------------------NTVINGLCKHGKYERAKEV 327
Query: 533 FTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
F + D ++ SL+ G +E K F M S +VVPD V F M+S +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNV 634
+G ++ L F V++ + P Y+ L+ R G + A N+
Sbjct: 388 SGNLDKALMYFNS-VKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 240/490 (48%), Gaps = 58/490 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + + +ISDA L D+M + + ++ T+I G +LHN EA L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK-ASEAVAL 210
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELL---ELVPDKLDTACWNAVIAGYAK 173
D M +R D ++ ++ ++G ++ A LL E K + +N +I K
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 174 KGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVS 225
A +F M K ++V+YNS++ G+ A M EK NVV+
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 226 WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+N ++ F G L A +L E++ +P+ +++ ++ GF H ++ EA+++F M
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLD 333
K N+ ++N +I + + ++++ V+LF +M + + V++TTII G+ + G D
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 334 EAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRD----TICWNSMI 385
A+ V+ QM DI + L+ GL G++D A +F L + +N+MI
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 386 AGFCQSGRMDEALDLFRQMP-KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV--- 441
G C++G++ EA DLF + K + V++NTMISG + A+++F+ M+E +
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Query: 442 -SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEY 500
++N+LI L++ + + + M G D ST V N LH+
Sbjct: 571 GTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL------------VTNMLHDG 618
Query: 501 ILKSGYINDL 510
L ++N L
Sbjct: 619 RLDKSFLNML 628
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 129/578 (22%), Positives = 240/578 (41%), Gaps = 103/578 (17%)
Query: 82 KISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWA 133
K+ DA LF M + ++V +N +++ + E L + M D ++++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 134 LMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLV 193
+ I C+ R+ +L A AV+A K G D+V
Sbjct: 123 IFINCFCRRSQLSLAL----------------AVLAKMMKLGY------------EPDIV 154
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSA----RQL 245
+ +S+L GY + ++ A+ ++M E + ++ ++ G S A Q+
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 246 FEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQI 301
++ P+ V++ T++ G + G I A L + M NVV +N +I + + +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 302 DEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET----AL 353
+ AV LF +M K + V++ ++IN G+ +A + + M K I AL
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 354 MSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
+ + G++ EA K+ ++ R DTI +N +I GFC R+DEA +F+ M K+
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 410 V----SWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALK 461
+ ++NT+I+G+ + +++ +F+ M +R N V++ ++I GF Q A
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
M D T+ + +Y+ KS ++F+ N +I
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 522 KCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIG 581
K G+V A +F ++ + PD VT+
Sbjct: 515 KAGKVGEAWDLFCSLS----------------------------------IKPDVVTYNT 540
Query: 582 MLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
M+S L + DLF+ M ED + P + Y+ L+
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTL-PNSGTYNTLI 577
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 207/443 (46%), Gaps = 68/443 (15%)
Query: 51 KVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K EAV + + + +LVTY ++++ K G I A L +KM + N+V +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTA 162
T+I VE A LF M + + P +
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKG-------------------------IRP---NVV 294
Query: 163 CWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+N++I G++SDA ++ + M K ++V++N+++ + + GK+ A E+M
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 219 AEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKI 270
++++ +++NL+++GF L A+Q+F+ + + PN ++ T++ GF + ++
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 271 TEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTI 322
+ LF M + N V++ +I + Q D A +F +M D ++++ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 323 INGYIRVGKLDEAREVYNQMPCKD----IAAETALMSGLIQTGRVDEASKMFNQLSTR-D 377
++G GKLD A ++ + + I ++ G+ + G+V EA +F LS + D
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPD 534
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQ 433
+ +N+MI+G C + EA DLFR+M + NS ++NT+I + ++ + +
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIK 594
Query: 434 AMEERNIV---SWNSLITGFLQN 453
M V S SL+T L +
Sbjct: 595 EMRSSGFVGDASTISLVTNMLHD 617
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/513 (21%), Positives = 228/513 (44%), Gaps = 63/513 (12%)
Query: 176 QFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWN 227
+ DA +F M P +V +N +L+ + K L + E+M ++ +++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 228 LMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
+ ++ F LS A + K+ P+ V+ ++L G+ +I++A L D M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM--- 179
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-DGVSWTTIINGYIRVGKLDEAREVYNQM 342
++M +K D ++TT+I+G K EA + +QM
Sbjct: 180 -------------------------VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 343 ---PCK-DIAAETALMSGLIQTGRVDEASKMFNQLST----RDTICWNSMIAGFCQSGRM 394
C+ D+ +++GL + G +D A + N++ + + +N++I C+ +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 395 DEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSL 446
+ A+DLF +M K N V++N++I+ G+ A + M E+ N+V++N+L
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
I F + +A K M + PD T+ Q+ ++++
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL----ISWNSLISGYALNGYAIEAFK 562
+ ++ N LI + KC RVE ++F + L +++ ++I G+ G A
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
FKQM+S V D +T+ +L G + L +FK ++ +E Y+ +++ +
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK-YLQKSEMELNIFIYNTMIEGM 513
Query: 623 GRMGRLEEAFNVVRGMDVKANAGLWGSLL-GAC 654
+ G++ EA+++ + +K + + +++ G C
Sbjct: 514 CKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC 546
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 183/371 (49%), Gaps = 39/371 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K VE AV +F+ I N+VTYNS+I+ G+ SDA +L M +
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
+ N+V++N +I + + EA KL + M +R D ++ L+I + +L++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 148 ARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
A+++ + + K + +N +I G+ K + D ++F M + L V+Y +++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 201 GYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNP---- 252
G+ Q G A F++M +++++++++ G + G L +A +F+ +
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
N + TM+ G + GK+ EA LF S+ K +VV++N MI+ + EA LF KM
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 312 PHKDGV-----SWTTIINGYIRVGKLDEAREVYNQMPCKDI---AAETALMSGLIQTGRV 363
+DG ++ T+I +R + E+ +M A+ +L++ ++ GR+
Sbjct: 562 -KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRL 620
Query: 364 DEASKMFNQLS 374
D++ N LS
Sbjct: 621 DKS--FLNMLS 629
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 162/333 (48%), Gaps = 33/333 (9%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLF 90
+V N I L G+ +A R+ SN + K N+VT+N++I F K GK+ +A +L
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 91 DKMSQRNL----VSWNTMIAGYLHNSMVEEASKLFDVMPERDNF----SWALMITCYTRK 142
++M QR++ +++N +I G+ ++ ++EA ++F M +D ++ +I + +
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 143 GKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVF-----NLMPVKDLVS 194
++E EL + + +T + +I G+ + G A+ VF N +P D+++
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT-DIMT 470
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
Y+ +L G GK+ AL F+ + E N+ +N M+ G +G + A LF +
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS 530
Query: 251 -NPNAVSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWNAMIAAYAQDLQIDEAV 305
P+ V++ TM+ G + EA LF M N ++N +I A +D +
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 306 KLFIKMPHKDGV---SWTTIINGYIRVGKLDEA 335
+L +M V S +++ + G+LD++
Sbjct: 591 ELIKEMRSSGFVGDASTISLVTNMLHDGRLDKS 623
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 152/389 (39%), Gaps = 47/389 (12%)
Query: 331 KLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQLST----RDTICWN 382
K+D+A +++ M P I L+S + + + + + Q+ T D ++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 383 SMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
I FC+ ++ AL + +M K GY E +IV+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKL----------GY-----------------EPDIVT 155
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
+SL+ G+ + DA+ + M G KPD TF L + ++
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAI 558
+ G DL ++ K G ++ A + +E +++ +N++I +
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
A F +M ++ + P+ VT+ +++ + G + L M+E I P ++ L
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNAL 334
Query: 619 VDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLLGACRVHKNLEIGE--FAAMRLSEL 673
+D + G+L EA + M + + + L+ +H L+ + F M +
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 674 EPHNASNYITLSNMHAEAGRWEE-VERLR 701
P N Y TL N + R E+ VE R
Sbjct: 395 LP-NIQTYNTLINGFCKCKRVEDGVELFR 422
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 227/436 (52%), Gaps = 49/436 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + +IS+A L D+M Q N V++NT+I G +LHN EA L
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK-ASEAVAL 207
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAK 173
D M R D F++ ++ ++G ++ A LL+ + + D + +I
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 174 KGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVS 225
+DA +F M K ++V+YNS++ G+ A M E+ NVV+
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 226 WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
++ ++ FV G L A +L++++ +P+ ++ +++ GF H ++ EA+ +F+ M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLD 333
K NVV++N +I + + +++E ++LF +M + + V++ T+I G + G D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 334 EAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A++++ +M DI + L+ GL + G++++A +F L D +N MI
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 386 AGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
G C++G++++ DLF + K N + + TMISG+ + G + A+ +F+ M+E +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 442 ----SWNSLITGFLQN 453
++N+LI L++
Sbjct: 568 PNSGTYNTLIRARLRD 583
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 231/521 (44%), Gaps = 44/521 (8%)
Query: 176 QFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWN 227
+ DA +F M P+ +V +N +L+ + K L + E+M ++ S+N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 228 LMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC- 282
++++ F L A + K+ P+ V+ ++L G+ +I+EA L D M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 283 ---KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEA 335
N V++N +I + EAV L +M + D ++ T++NG + G +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 336 REVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAG 387
+ +M I A+ T ++ L V++A +F ++ + + + +NS+I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 388 FCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----N 439
C GR +A L M ++ N V+++ +I + + G++ AE ++ M +R +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHE 499
I +++SLI GF + +A LM + P+ T+ + G +L
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 500 YILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNG 555
+ + G + + N LI + G + A+++F + D+I+++ L+ G G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 556 YAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHY 615
+A F+ + ++ PD T+ M+ AG G DLF C + ++P Y
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF-CSLSLKGVKPNVIIY 538
Query: 616 SCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLWGSLLGA 653
+ ++ R G EEA + R M N+G + +L+ A
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 202/437 (46%), Gaps = 66/437 (15%)
Query: 51 KVEEAV----RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K EAV R+ + +L TY ++++ K G I A L KM + ++V +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPD 157
T+I + V +A LF M + + ++ +I C G+ A LL +++
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 158 KL--DTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLA 211
K+ + ++A+I + K+G+ +AEK+++ M + D+ +Y+S++ G+ + ++ A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 212 LHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARH 267
H FE M K NVV++N ++ GF + + +LF ++ V
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG----------- 428
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTII 323
N V++N +I Q D A K+F KM D ++++ ++
Sbjct: 429 ----------------NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 324 NGYIRVGKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR--- 376
+G + GKL++A V+ + DI ++ G+ + G+V++ +F LS +
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENI 431
+ I + +MI+GFC+ G +EA LFR+M + NS ++NT+I + G ++ +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 432 FQAMEERNIVSWNSLIT 448
+ M V S I+
Sbjct: 593 IKEMRSCGFVGDASTIS 609
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 179/354 (50%), Gaps = 40/354 (11%)
Query: 52 VEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNT 103
V +A+ +F+ I N+VTYNS+I G+ SDA +L M +R N+V+++
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 104 MIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK- 158
+I ++ + EA KL+D M +R D F+++ +I + +L++A+ + EL+ K
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 159 --LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLAL 212
+ +N +I G+ K + + ++F M + L V+YN+++ G Q G +A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 213 HFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGF 264
F+KM +++++++++ G G L A +FE + P+ ++ M+ G
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 265 ARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV--- 317
+ GK+ + LF S+ K NV+ + MI+ + + +EA LF +M +DG
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM-KEDGTLPN 569
Query: 318 --SWTTIINGYIRVGKLDEAREVYNQM-PCKDI--AAETALMSGLIQTGRVDEA 366
++ T+I +R G + E+ +M C + A+ +++ ++ GR++++
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 151/296 (51%), Gaps = 33/296 (11%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLF 90
+V N I L G+ +A R+ S+ I + N+VT++++I F K GK+ +A +L+
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 91 DKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF----SWALMITCYTRK 142
D+M +R ++ +++++I G+ + ++EA +F++M +D F ++ +I + +
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 143 GKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLM-----PVKDLVS 194
++E+ EL + + +T +N +I G + G A+K+F M P D+++
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP-PDIIT 467
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP 250
Y+ +L G + GK+ AL FE + E ++ ++N+M+ G +G + LF +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 251 ----NPNAVSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWNAMIAAYAQD 298
PN + + TM+ GF R G EA LF M N ++N +I A +D
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 121/540 (22%), Positives = 228/540 (42%), Gaps = 111/540 (20%)
Query: 244 QLFEKIPNPNAVSWVTMLCGFARHGK----ITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
++ + P P+ V + +L A+ K I+ R+ + ++ S+N +I + +
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 300 QIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET---- 351
Q+ A+ + KM D V+ ++++NGY ++ EA + +QM + T
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPK- 406
L+ GL + EA + +++ R D + +++ G C+ G +D AL L ++M K
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 407 ---KNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDA 459
+ V + T+I ++ A N+F M+ + N+V++NSLI + DA
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
+ L M P+ TF +ALI
Sbjct: 310 SRLLSDMIERKINPNVVTF-----------------------------------SALIDA 334
Query: 520 YAKCGRVESAEQVFT-----AIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
+ K G++ AE+++ +I+ D+ +++SLI+G+ ++ EA F+ M+S++ P
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 575 DQVTFIGMLSACSHAGLANQGLDL-----------------------------------F 599
+ VT+ ++ A +G++L F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 600 KCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAGLWGSLL-GACR 655
K MV D + P YS L+D L + G+LE+A F ++ ++ + + ++ G C+
Sbjct: 454 KKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 656 VHKNLEIG--EFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
K +E G F ++ L ++P N Y T+ + G EE + L M K G LP
Sbjct: 513 AGK-VEDGWDLFCSLSLKGVKP-NVIIYTTMISGFCRKGLKEEADALFREM--KEDGTLP 568
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 224/436 (51%), Gaps = 49/436 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + +ISDA L D+M + + +++ T+I G +LHN EA L
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-ASEAVAL 212
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELL---ELVPDKLDTACWNAVIAGYAK 173
D M +R + ++ +++ ++G + A LL E + D +N +I K
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 174 KGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVS 225
DA +F M K ++V+Y+S+++ G+ A M EK N+V+
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 226 WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+N ++ FV G A +L++ + +P+ ++ +++ GF H ++ +A+++F+ M
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLD 333
K +VV++N +I + + ++++ +LF +M H+ D V++TT+I G G D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 334 EAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A++V+ QM DI + L+ GL G++++A ++F+ + D + +MI
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 386 AGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE---- 437
G C++G++D+ DLF + K N V++NTMISG + A + + M+E
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 438 RNIVSWNSLITGFLQN 453
N ++N+LI L++
Sbjct: 573 PNSGTYNTLIRAHLRD 588
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 211/446 (47%), Gaps = 69/446 (15%)
Query: 51 KVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K EAV + + + NLVTY +++ K G A L +KM + ++V +N
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPD 157
T+I V++A LF M + + +++ +I+C G+ A +LL +++
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 158 KLDT--ACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLA 211
K++ +NA+I + K+G+F +AEK+++ M + D+ +YNS++ G+ + ++ A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 212 LHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARH 267
FE M K +VV++N ++ GF S + +LF ++ + V
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----------- 433
Query: 268 GKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV-----SWTTI 322
+ V++ +I D D A K+F +M DGV +++ +
Sbjct: 434 ----------------DTVTYTTLIQGLFHDGDCDNAQKVFKQMV-SDGVPPDIMTYSIL 476
Query: 323 INGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR-- 376
++G GKL++A EV++ M DI T ++ G+ + G+VD+ +F LS +
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 377 --DTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAEN 430
+ + +N+MI+G C + EA L ++M P NS ++NT+I + + G ++
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLY 456
+ + M V S I G + N L+
Sbjct: 597 LIREMRSCRFVGDASTI-GLVANMLH 621
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/554 (22%), Positives = 248/554 (44%), Gaps = 66/554 (11%)
Query: 176 QFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWN 227
+ DA +F M P+ +V +N +L+ + K + + EKM +V ++N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 228 LMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
++++ F +S A L K+ P+ V+ ++L G+ +I++A L D M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM--- 181
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK-DGVSWTTIINGYIRVGKLDEAREVYNQM 342
++M ++ D +++TT+I+G K EA + ++M
Sbjct: 182 -------------------------VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 343 ---PCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRM 394
C+ ++ +++GL + G D A + N++ D + +N++I C+ +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 395 DEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSL 446
D+AL+LF++M K N V+++++IS G+ A + M E+ N+V++N+L
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
I F++ + +A K M + PD T+ Q+ E+++
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFK 562
D+ N LI + K RVE ++F + D +++ +LI G +G A K
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
FKQM+S+ V PD +T+ +L + G + L++F M + I+ Y+ +++ +
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGM 515
Query: 623 GRMGRLEEAFNVVRGMD---VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEP-HNA 678
+ G++++ +++ + VK N + +++ + L+ ++ E P N+
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 679 SNYITLSNMHAEAG 692
Y TL H G
Sbjct: 576 GTYNTLIRAHLRDG 589
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 236/518 (45%), Gaps = 82/518 (15%)
Query: 143 GKLEKARELLELVPDKLDTACWNAVIAGYAKKGQF----SDAEKVFNLMPVKDLVSYNSM 198
G + K+R L +V +N +++ AK +F S EK+ L V L +YN +
Sbjct: 74 GGMVKSRPLPSIVE-------FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 199 LAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP---- 250
+ + + ++ LAL KM E ++V+ + +++G+ + +S A L +++
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSM------P------------CK--------- 283
P+ +++ T++ G H K +EA L D M P CK
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 284 ------------NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYI 327
+VV +N +I + + +D+A+ LF +M K + V+++++I+
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 328 RVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR----DTI 379
G+ +A ++ + M K I AL+ ++ G+ EA K+++ + R D
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 380 CWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAM 435
+NS++ GFC R+D+A +F M K+ V++NT+I G+ ++ +++ +F+ M
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 436 EERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
R + V++ +LI G + +A K M +G PD T+
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSL 547
+ ++ +Y+ KS D+++ +I K G+V+ +F ++ +++++N++
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
ISG EA+ K+M + +P+ T+ ++ A
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 183/365 (50%), Gaps = 38/365 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K V++A+ +F + I N+VTY+S+IS G+ SDA QL M +
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
+ NLV++N +I ++ EA KL+D M +R D F++ ++ + +L+K
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 148 ARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLA 200
A+++ E + K D +N +I G+ K + D ++F M V D V+Y +++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 201 GYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP---- 252
G +G A F++M +++++++++ G N+G L A ++F+ +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF 308
+ + TM+ G + GK+ + LF S+ K NVV++N MI+ + EA L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 309 IKM----PHKDGVSWTTIINGYIRVGKLDEAREVYNQM-PCKDI--AAETALMSGLIQTG 361
KM P + ++ T+I ++R G + E+ +M C+ + A+ L++ ++ G
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Query: 362 RVDEA 366
R+D++
Sbjct: 624 RLDKS 628
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 227/442 (51%), Gaps = 44/442 (9%)
Query: 48 KLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS-QRNLVSWN 102
+LGK +A ++ + +++TYN MIS + K G+I++A + D+MS ++V++N
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYN 208
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNF----SWALMITCYTRKGKLEKARELLELVPDK 158
T++ + +++A ++ D M +RD + ++ ++I R + A +LL+ + D+
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 159 ---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLA 211
D +N ++ G K+G+ +A K N MP +++++N +L G+ A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 212 LHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCG 263
M K +VV++N++++ G L A + EK+P PN++S+ +L G
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 264 FARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDG--- 316
F + K+ A + M + ++V++N M+ A +D ++++AV++ ++ K
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 317 -VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFN 371
+++ T+I+G + GK +A ++ ++M KD+ +T +L+ GL + G+VDEA K F+
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 372 QLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAG 423
+ + + +NS++ G C+S + D A+D M K N S+ +I G A G
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 424 QMDSAENIFQAMEERNIVSWNS 445
A + + + ++ +S
Sbjct: 569 MAKEALELLNELCNKGLMKKSS 590
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 226/480 (47%), Gaps = 69/480 (14%)
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQ 244
V D++ +++ G+ + GK A E + A +V+++N+M+SG+ +G++++A
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 245 LFEKIP-NPNAVSWVTMLCGFARHGKITEARRLFDSM---PC-KNVVSWNAMIAAYAQDL 299
+ +++ +P+ V++ T+L GK+ +A + D M C +V+++ +I A +D
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 300 QIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMP---CK-DIAAET 351
+ A+KL +M + D V++ ++NG + G+LDEA + N MP C+ ++
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPK- 406
++ + TGR +A K+ + + + +N +I C+ G + A+D+ +MP+
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 407 ---KNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDA 459
NS+S+N ++ G+ + +MD A + M R +IV++N+++T ++ DA
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
++ L + +G P T+ N +I
Sbjct: 434 VEILNQLSSKGCSPVLITY-----------------------------------NTVIDG 458
Query: 520 YAKCGRVESAEQVFTAIECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
AK G+ A ++ + DL I+++SL+ G + G EA K F + + P+
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 576 QVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
VTF ++ + ++ +D M+ + +P Y+ L++ L G +EA ++
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMI-NRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 202/447 (45%), Gaps = 31/447 (6%)
Query: 195 YNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN--- 251
+ ++ +GY+ + G A ++V S N + V +G+L + E +
Sbjct: 75 FETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGN 133
Query: 252 -PNAVSWVTMLCGFARHGKITEARRLFD----SMPCKNVVSWNAMIAAYAQDLQIDEAVK 306
P+ + T++ GF R GK +A ++ + S +V+++N MI+ Y + +I+ A+
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 307 LFIKMP-HKDGVSWTTIINGYIRVGKLDEAREVYNQM---PC-KDIAAETALMSGLIQTG 361
+ +M D V++ TI+ GKL +A EV ++M C D+ T L+ +
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 362 RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWN 413
V A K+ +++ R D + +N ++ G C+ GR+DEA+ MP + N ++ N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 414 TMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGRE 469
++ G+ AE + M + ++V++N LI + L A+ L M +
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA 529
G +P+ ++ + E ++ G D+ N ++ K G+VE A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 530 EQVFTAIE---CVD-LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
++ + C LI++N++I G A G +A K +M ++++ PD +T+ ++
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 586 CSHAGLANQGLDLFKCMVEDFAIEPLA 612
S G ++ + F E I P A
Sbjct: 494 LSREGKVDEAIKFFH-EFERMGIRPNA 519
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 19/179 (10%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKN----LVTYNSMISVFAKNGKISDARQLFD 91
+ N + L K GKVE+AV + + K L+TYN++I AK GK A +L D
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 92 KMSQRNL----VSWNTMIAGYLHNSMVEEASKLF------DVMPERDNFSWALMITCYTR 141
+M ++L +++++++ G V+EA K F + P F+ ++ C +R
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 142 KGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNS 197
+ ++A + L + + K + + +I G A +G +A ++ N + K L+ +S
Sbjct: 534 --QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 229/436 (52%), Gaps = 49/436 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + + +ISDA L D+M + + ++ T+I G +LHN EA L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK-ASEAVAL 210
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAK 173
D M +R D ++ ++ ++G ++ A LL+ + + D +N +I G K
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 174 KGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVS 225
DA +F M K D+ +Y+S+++ G+ A M E+ NVV+
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 226 WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
++ ++ FV G L A +L++++ +P+ ++ +++ GF H ++ EA+ +F+ M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLD 333
K NVV+++ +I + + +++E ++LF +M + + V++TT+I+G+ + D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 334 EAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A+ V+ QM +I L+ GL + G++ +A +F L D +N MI
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 386 AGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEE---- 437
G C++G++++ +LF + K N +++NTMISG+ + G + A+++ + M+E
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 438 RNIVSWNSLITGFLQN 453
N ++N+LI L++
Sbjct: 571 PNSGTYNTLIRARLRD 586
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/559 (22%), Positives = 253/559 (45%), Gaps = 126/559 (22%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWNTMIAGYLHNSMVEEAS 118
I +L TY+ I+ F + ++S A + KM + ++V+ ++++ GY H+ + +A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 119 KLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKK 174
L D M E D F++ +I KA E + LV + C
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLH---NKASEAVALVDQMVQRGCQ---------- 220
Query: 175 GQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMV 230
DLV+Y +++ G + G + LAL +KM E +VV +N ++
Sbjct: 221 ---------------PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 231 SGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
G + A LF ++ N P+ ++ +++ +G+ ++A RL M + +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI- 324
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK- 345
+ + V+++ +I+ +++ GKL EA ++Y++M +
Sbjct: 325 --------------------------NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 346 ---DIAAETALMSGLIQTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEAL 398
DI ++L++G R+DEA MF + ++D + ++++I GFC++ R++E +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 399 DLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLITGF 450
+LFR+M ++ N+V++ T+I G+ QA D+A+ +F+ M NI+++N L+ G
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDL 510
+N K++V+ EY+ +S D+
Sbjct: 479 CKNG---KLAKAMVVF--------------------------------EYLQRSTMEPDI 503
Query: 511 FVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQ 566
+ N +I K G+VE ++F + ++I++N++ISG+ G EA K+
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 567 MLSEEVVPDQVTFIGMLSA 585
M + +P+ T+ ++ A
Sbjct: 564 MKEDGPLPNSGTYNTLIRA 582
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 123/554 (22%), Positives = 256/554 (46%), Gaps = 86/554 (15%)
Query: 143 GKLEKARELLELVPDKLDTACWNAVIAGYAKKGQF----SDAEKVFNLMPVKDLVSYNSM 198
G + K+R +V +N +++ AK +F S E++ L DL +Y+
Sbjct: 72 GDMVKSRPFPSIVE-------FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 199 LAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSA----RQLFEKIP 250
+ + + ++ LAL KM E ++V+ + +++G+ +S +S A Q+ E
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSM---PCK-NVVSWNAMIAAYAQDLQIDEAVK 306
P+ ++ T++ G H K +EA L D M C+ ++V++ ++ + ID A+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 307 LFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLI 358
L KM D V + TII+G + +D+A ++ +M K D+ ++L+S L
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 359 QTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSV 410
GR +AS++ + + R + + ++++I F + G++ EA L+ +M K+ +
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLM 466
+++++I+G+ ++D A+++F+ M + N+V++++LI GF +
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK-------------- 410
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
K+ ++ G +L + + G + + LI + +
Sbjct: 411 ---AKRVEE------------------GMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 527 ESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
++A+ VF + V +++++N L+ G NG +A F+ + + PD T+ M
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ AG G +LF C + + P Y+ ++ R G EEA ++++ M
Sbjct: 510 IEGMCKAGKVEDGWELF-CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 643 ---NAGLWGSLLGA 653
N+G + +L+ A
Sbjct: 569 PLPNSGTYNTLIRA 582
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 170/334 (50%), Gaps = 34/334 (10%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFD 91
VF + I L G+ +A R+ S+ I + N+VT++++I F K GK+ +A +L+D
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 92 KMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF----SWALMITCYTRKG 143
+M +R ++ +++++I G+ + ++EA +F++M +D F +++ +I + +
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 144 KLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYN 196
++E+ EL + + +T + +I G+ + +A+ VF M ++++YN
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 197 SMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-- 250
+L G +NGK+ A+ FE + E ++ ++N+M+ G +G + +LF +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 251 --NPNAVSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWNAMIAAYAQDLQIDEA 304
+PN +++ TM+ GF R G EA L M P N ++N +I A +D + +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 305 VKLFIKMPH---KDGVSWTTIINGYIRVGKLDEA 335
+L +M S ++ + G+LD++
Sbjct: 593 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 184/365 (50%), Gaps = 38/365 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K +++A+ +F+ I ++ TY+S+IS G+ SDA +L M +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
R N+V+++ +I ++ + EA KL+D M +R D F+++ +I + +L++
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 148 ARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
A+ + EL+ K + ++ +I G+ K + + ++F M + L V+Y +++
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 201 GYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----P 252
G+ Q A F++M N++++N+++ G +G L+ A +FE + P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF 308
+ ++ M+ G + GK+ + LF ++ K NV+++N MI+ + + +EA L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 309 IKM----PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA---LMSGLIQTG 361
KM P + ++ T+I +R G + + E+ +M A + + L++ ++ G
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
Query: 362 RVDEA 366
R+D++
Sbjct: 622 RLDKS 626
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 228/516 (44%), Gaps = 78/516 (15%)
Query: 269 KITEARRLFDSM----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWT 320
K+ +A LF M P ++V +N +++A A+ + + + L +M D +++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 321 TIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQLS 374
IN + R +L A V +M P DI ++L++G + R+ +A + +Q+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 375 ----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMD 426
DT + ++I G + EA+ L QM ++ V++ T+++G + G +D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 427 SAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
A ++ + ME E ++V +N++I G + DAL M +G +PD T+
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT-----AIE 537
++L +++ ++ +ALI + K G++ AE+++ +I+
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 538 CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLD 597
D+ +++SLI+G+ ++ EA F+ M+S++ P+ VT+ ++ A +G++
Sbjct: 361 -PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 598 LFKCMVE----------------------------------DFAIEPLAEHYSCLVDLLG 623
LF+ M + + P Y+ L+D L
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 624 RMGRLEEA---FNVVRGMDVKANAGLWGSLL-GACRVHKNLEIG--EFAAMRLSELEPHN 677
+ G+L +A F ++ ++ + + ++ G C+ K +E G F + L + P N
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK-VEDGWELFCNLSLKGVSP-N 537
Query: 678 ASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLP 713
Y T+ + G EE + L L + K G LP
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSL--LKKMKEDGPLP 571
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 233/457 (50%), Gaps = 47/457 (10%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLFDV 123
V +N++++ ++S+A +L D+M + L++ NT++ G N V +A L D
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 124 MPER----DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQ 176
M E + ++ ++ + G+ A ELL + + KLD ++ +I G K G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 177 FSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNL 228
+A +FN M +K D+++YN+++ G+ G+ M ++ NVV++++
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 229 MVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK- 283
++ FV G L A QL +++ PN +++ +++ GF + ++ EA ++ D M K
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 284 ---NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAR 336
+++++N +I Y + +ID+ ++LF +M + + V++ T++ G+ + GKL+ A+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 337 EVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGF 388
+++ +M + DI + L+ GL G +++A ++F ++ D + +I G
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 389 CQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NI 440
C + ++D+A DLF +P K ++ ++N MIS + + A+ +F+ M E +
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 441 VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
+++N LI L + A + + M G D ST
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 220/446 (49%), Gaps = 52/446 (11%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNS 112
R FS +NL +Y +S K DA LF M Q ++ +N + +
Sbjct: 44 RGFSTFSDRNL-SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTK 102
Query: 113 MVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWN 165
E L M + ++ ++MI C+ R KL A + + + DT +N
Sbjct: 103 QYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFN 162
Query: 166 AVIAGYAKKGQFSDAEKVFNLM------PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
++ G + + S+A ++ + M P L++ N+++ G NGK+ A+ ++M
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPT--LITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 220 E----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN----AVSWVTMLCGFARHGKIT 271
E N V++ +++ SG + A +L K+ N AV + ++ G + G +
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
A LF+ M K +++++N +I + + D+ KL M + + V+++ +I
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTR--- 376
+ +++ GKL EA ++ +M + IA T +L+ G + R++EA +M + + ++
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENI 431
D + +N +I G+C++ R+D+ L+LFR+M + N+V++NT++ G+ Q+G+++ A+ +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 432 FQAMEER----NIVSWNSLITGFLQN 453
FQ M R +IVS+ L+ G N
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDN 486
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 149/303 (49%), Gaps = 30/303 (9%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEAS 118
I N+VT++ +I F K GK+ +A QL +M QR N +++N++I G+ + +EEA
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 119 KLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGY 171
++ D+M + D ++ ++I Y + +++ EL + + +T +N ++ G+
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 172 AKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNV 223
+ G+ A+K+F M + D+VSY +L G NG++ AL F K+ E ++
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDS 279
+ +++ G N+ + A LF +P +A ++ M+ R +++A LF
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 280 MP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD---GVSWTTIINGYIRVGKL 332
M + +++N +I A+ D A +L +M VS ++ + G+L
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL 628
Query: 333 DEA 335
D++
Sbjct: 629 DKS 631
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/528 (21%), Positives = 212/528 (40%), Gaps = 125/528 (23%)
Query: 179 DAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMV 230
DA +F M P+ ++ +N + + + + L L ++M K + + ++M+
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 231 SGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV 286
+ F LS A KI P+ V + T+L G +++EA L D M
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM------ 184
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMPHKDG-VSWTTIINGYIRVGKLDEAREVYNQMPCK 345
++M HK ++ T++NG GK+ +A
Sbjct: 185 ----------------------VEMGHKPTLITLNTLVNGLCLNGKVSDA---------- 212
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
L+ +++TG F + + + ++ C+SG+ A++L R+M
Sbjct: 213 -----VVLIDRMVETG--------FQP----NEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 406 KKN----SVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITGFLQNSLYF 457
++N +V ++ +I G + G +D+A N+F ME + +I+++N+LI GF +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
D K L M + P+ TF + LI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTF-----------------------------------SVLI 340
Query: 518 AMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
+ K G++ A+Q+ + + I++NSLI G+ EA + M+S+
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN 633
PD +TF +++ A + GL+LF+ M I Y+ LV + G+LE A
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV-TYNTLVQGFCQSGKLEVAKK 459
Query: 634 VVRGM-------DVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELE 674
+ + M D+ + L L + K LEI F + S++E
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI--FGKIEKSKME 505
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 222/436 (50%), Gaps = 49/436 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + +ISDA L D+M + + +++ T+I G +LHN EA L
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-ASEAVAL 137
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELL---ELVPDKLDTACWNAVIAGYAK 173
D M +R + ++ +++ ++G ++ A LL E + D +N +I K
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 174 KGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVS 225
DA +F M K ++V+Y+S+++ G+ A M EK N+V+
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 226 WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+N ++ FV G A +L + + +P+ ++ +++ GF H ++ +A+++F+ M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 282 CKNVV----SWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLD 333
K+ ++N +I + + ++++ +LF +M H+ D V++TT+I G G D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 334 EAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A++V+ QM DI + L+ GL G++++A ++F+ + D + +MI
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 386 AGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV 441
G C++G++D+ DLF + K N V++NTMISG + A + + M+E +
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 442 ----SWNSLITGFLQN 453
++N+LI L++
Sbjct: 498 PDSGTYNTLIRAHLRD 513
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 185/368 (50%), Gaps = 44/368 (11%)
Query: 40 NQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K V++A+ +F + I N+VTY+S+IS G+ SDA QL M +
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
+ NLV++N +I ++ EA KL D M +R D F++ +I + +L+K
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 148 ARELLELV------PDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNS 197
A+++ E + PD LDT +N +I G+ K + D ++F M V D V+Y +
Sbjct: 309 AKQMFEFMVSKDCFPD-LDT--YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 198 MLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP- 252
++ G +G A F++M +++++++++ G N+G L A ++F+ +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 253 ---NAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAV 305
+ + TM+ G + GK+ + LF S+ K NVV++N MI+ + EA
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 306 KLFIKM----PHKDGVSWTTIINGYIRVGKLDEAREVYNQM-PCKDI--AAETALMSGLI 358
L KM P D ++ T+I ++R G + E+ +M C+ + A+ L++ ++
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Query: 359 QTGRVDEA 366
GR+D++
Sbjct: 546 HDGRLDKS 553
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/538 (22%), Positives = 242/538 (44%), Gaps = 62/538 (11%)
Query: 188 PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSAR 243
P+ + +N +L+ + K L + EKM N+ ++N++++ F +S A
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 244 QLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
L K+ P+ V+ ++L G+ +I++A L D M
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM------------------- 106
Query: 300 QIDEAVKLFIKMPHK-DGVSWTTIINGYIRVGKLDEAREVYNQM---PCK-DIAAETALM 354
++M ++ D +++TT+I+G K EA + ++M C+ ++ ++
Sbjct: 107 ---------VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 355 SGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK--- 407
+GL + G +D A + N++ D + +N++I C+ +D+AL+LF++M K
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 408 -NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKS 462
N V+++++IS G+ A + M E+ N+V++N+LI F++ + +A K
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 463 LVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAK 522
M + PD T+ Q+ E+++ DL N LI + K
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 523 CGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
RVE ++F + D +++ +LI G +G A K FKQM+S+ V PD +T
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
+ +L + G + L++F M + I+ Y+ +++ + + G++++ +++ +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 639 D---VKANAGLWGSLLGACRVHKNLEIGEFAAMRLSELEP-HNASNYITLSNMHAEAG 692
VK N + +++ + L+ ++ E P ++ Y TL H G
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 210/446 (47%), Gaps = 69/446 (15%)
Query: 51 KVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWN 102
K EAV + + + NLVTY +++ K G I A L +KM + ++V +N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 103 TMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPD 157
T+I V++A LF M + + +++ +I+C G+ A +LL +++
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 158 KLDT--ACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLA 211
K++ +NA+I + K+G+F +AEK+ + M + D+ +YNS++ G+ + ++ A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 212 LHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKIT 271
FE M K+ P+ ++ T++ GF + ++
Sbjct: 310 KQMFEFMVSKDCF---------------------------PDLDTYNTLIKGFCKSKRVE 342
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV-----SWTTI 322
+ LF M + + V++ +I D D A K+F +M DGV +++ +
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV-SDGVPPDIMTYSIL 401
Query: 323 INGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR-- 376
++G GKL++A EV++ M DI T ++ G+ + G+VD+ +F LS +
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 377 --DTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAEN 430
+ + +N+MI+G C + EA L ++M P +S ++NT+I + + G ++
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 431 IFQAMEERNIVSWNSLITGFLQNSLY 456
+ + M V S I G + N L+
Sbjct: 522 LIREMRSCRFVGDASTI-GLVANMLH 546
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 226/497 (45%), Gaps = 75/497 (15%)
Query: 164 WNAVIAGYAKKGQF----SDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+N +++ AK +F S EK+ L +L +YN ++ + + ++ LAL KM
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 220 ----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKIT 271
E ++V+ + +++G+ + +S A L +++ P+ +++ T++ G H K +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 272 EARRLFDSM------P------------CK---------------------NVVSWNAMI 292
EA L D M P CK +VV +N +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 293 AAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA 348
+ + +D+A+ LF +M K + V+++++I+ G+ +A ++ + M K I
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 349 AE----TALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDL 400
AL+ ++ G+ EA K+ + + R D +NS+I GFC R+D+A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 401 FRQMPKKNSV----SWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQ 452
F M K+ ++NT+I G+ ++ +++ +F+ M R + V++ +LI G
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 453 NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFV 512
+ +A K M +G PD T+ + ++ +Y+ KS D+++
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 513 SNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQML 568
+I K G+V+ +F ++ +++++N++ISG EA+ K+M
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 569 SEEVVPDQVTFIGMLSA 585
+ +PD T+ ++ A
Sbjct: 493 EDGPLPDSGTYNTLIRA 509
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/578 (22%), Positives = 269/578 (46%), Gaps = 101/578 (17%)
Query: 51 KVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
K+++AV +F + + ++V ++ ++S AK K L ++M +NL
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM--QNL-------- 110
Query: 107 GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTAC 163
G HN ++++++I C+ R+ +L A +L + + D
Sbjct: 111 GISHNL-----------------YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 153
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
N+++ G+ + SDA + M D ++N+++ G ++ + A+ ++M
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213
Query: 220 EK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKIT 271
K ++V++ ++V+G GD+ A L +K+ P V + T++ + +
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
+A LF M K NVV++N++I + +A +L M + + V+++ +I
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 324 NGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRD-- 377
+ +++ GKL EA ++Y++M + DI ++L++G R+DEA MF + ++D
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 378 --TICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENI 431
+ +N++I GFC++ R+DE ++LFR+M ++ N+V++ T+I G+ QA + D+A+ +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 432 FQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXX 491
F+ M +G PD T+
Sbjct: 454 FKQMVS-------------------------------DGVLPDIMTYSILLDGLCNNGKV 482
Query: 492 QVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSL 547
+ + EY+ +S D++ N +I K G+VE +F ++ +++++ ++
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+SG+ G EA F++M E +PD T+ ++ A
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 122/554 (22%), Positives = 253/554 (45%), Gaps = 86/554 (15%)
Query: 143 GKLEKARELLELVPDKLDTACWNAVIAGYAKKGQF----SDAEKVFNLMPVKDLVSYNSM 198
G + K+R +V ++ +++ AK +F S E++ NL +L +Y+ +
Sbjct: 70 GDMVKSRPFPSIVE-------FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 199 LAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSA----RQLFEKIP 250
+ + + ++ LAL KM E ++V+ N +++GF + +S A Q+ E
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVK 306
P++ ++ T++ G RH + +EA L D M K ++V++ ++ + ID A+
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 307 LFIKMPH---KDGVS-WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT-- 360
L KM + GV + TII+ +++A ++ +M K I + LI+
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 361 --GRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSV 410
GR +AS++ + + R + + ++++I F + G++ EA L+ +M K+ +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 411 SWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLM 466
+++++I+G+ ++D A+++F+ M + N+V++N+LI GF +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK-------------- 408
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
K+ D+ G +L + + G + + LI + +
Sbjct: 409 ---AKRVDE------------------GMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 527 ESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
++A+ VF + D+++++ L+ G NG A F+ + ++ PD T+ M
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 583 LSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ AG G DLF C + ++P Y+ ++ R G EEA + R M +
Sbjct: 508 IEGMCKAGKVEDGWDLF-CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 643 ---NAGLWGSLLGA 653
++G + +L+ A
Sbjct: 567 PLPDSGTYNTLIRA 580
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 177/362 (48%), Gaps = 57/362 (15%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLF 90
+V N I L G+ +A R+ S+ I + N+VT++++I F K GK+ +A +L+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 91 DKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF----SWALMITCYTRK 142
D+M +R ++ +++++I G+ + ++EA +F++M +D F ++ +I + +
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 143 GKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLM----PVKDLVSY 195
++++ EL + + +T + +I G+ + + +A+ VF M + D+++Y
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 196 NSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP- 250
+ +L G NGK+ AL FE + E ++ ++N+M+ G +G + LF +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 251 ---NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKL 307
PN V++ TM+ GF R G EA LF M +E
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK--------------------EEG--- 566
Query: 308 FIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM-PCKDI--AAETALMSGLIQTGRVD 364
P D ++ T+I ++R G + E+ +M C+ + A+ L++ ++ GR+D
Sbjct: 567 ----PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLD 622
Query: 365 EA 366
++
Sbjct: 623 KS 624
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/549 (21%), Positives = 228/549 (41%), Gaps = 121/549 (22%)
Query: 237 GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMI 292
GD+ +R P P+ V + +L A+ K L + M N+ +++ +I
Sbjct: 70 GDMVKSR------PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 293 AAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQM------ 342
+ + Q+ A+ + KM D V+ +++NG+ ++ +A + QM
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 343 PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEAL 398
P D L+ GL + R EA + +++ + D + + ++ G C+ G +D AL
Sbjct: 184 P--DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 399 DLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGF 450
L ++M + V +NT+I ++ A N+F M+ + N+V++NSLI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDL 510
+ DA + L M P+ TF
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTF-------------------------------- 329
Query: 511 FVSNALIAMYAKCGRVESAEQVFT-----AIECVDLISWNSLISGYALNGYAIEAFKAFK 565
+ALI + K G++ AE+++ +I+ D+ +++SLI+G+ ++ EA F+
Sbjct: 330 ---SALIDAFVKEGKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFE 385
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL--------------------------- 598
M+S++ P+ VT+ ++ A ++G++L
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 599 --------FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAGLW 647
FK MV D + P YS L+D L G++E A F ++ ++ + +
Sbjct: 446 ECDNAQIVFKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 648 GSLL-GACRVHKNLEIG--EFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLM 704
++ G C+ K +E G F ++ L ++P N Y T+ + G EE + L M
Sbjct: 505 NIMIEGMCKAGK-VEDGWDLFCSLSLKGVKP-NVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 705 RDKRAGKLP 713
+++ G LP
Sbjct: 563 KEE--GPLP 569
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 235/462 (50%), Gaps = 47/462 (10%)
Query: 64 HKNLVTYNSMISVFAKNGKISDARQLFDK---MSQR-NLVSWNTMIAGYLHNSMVEEASK 119
+ +T++++++ F G++S+A L D+ M QR +LV+ +T+I G V EA
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 120 LFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYA 172
L D M E D ++ ++ + G A +L + + K ++ VI
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 173 KKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN----VV 224
K G F DA +FN M +K D+V+Y+S++ G +GK +M +N VV
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM 280
+++ ++ FV G L A++L+ ++ P+ +++ +++ GF + + EA ++FD M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 281 PCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKL 332
K ++V+++ +I +Y + ++D+ ++LF ++ K + +++ T++ G+ + GKL
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 333 DEAREVYNQMPCKDIAAETA----LMSGLIQTGRVDEASKMFNQL-STRDTI---CWNSM 384
+ A+E++ +M + + L+ GL G +++A ++F ++ +R T+ +N +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 385 IAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI 440
I G C + ++D+A LF + K + V++N MI G + G + A+ +F+ M+E
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 441 V----SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
++N LI L S +++ + M G D ST
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/549 (23%), Positives = 262/549 (47%), Gaps = 86/549 (15%)
Query: 82 KISDARQLFDKMSQ-RNL---VSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWA 133
K++DA LF+ M Q R L + +N + + + M E D ++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 134 LMITCYTRKGKLEKARELLEL---VPDKLDTACWNAVIAGYAKKGQFSDA----EKVFNL 186
+MI CY RK KL A +L + + DT ++ ++ G+ +G+ S+A +++ +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 187 MPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSA 242
DLV+ ++++ G G++ AL ++M E + V++ +++ SG+ + A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 243 RQLFEKIPNPN----AVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAA 294
LF K+ N V + ++ + G +A LF+ M K +VV+++++I
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 295 YAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE 350
D + D+ K+ +M + D V+++ +I+ +++ GKL EA+E+YN+M + IA +
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 351 T----ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFR 402
T +L+ G + + EA++MF+ + ++ D + ++ +I +C++ R+D+ + LFR
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 403 QMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNS 454
++ K N++++NT++ G+ Q+G++++A+ +FQ M R ++V++ L+ G N
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 455 LYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSN 514
AL ++ E + KS + + N
Sbjct: 470 ELNKAL-----------------------------------EIFEKMQKSRMTLGIGIYN 494
Query: 515 ALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
+I +V+ A +F ++ D++++N +I G G EA F++M +
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 571 EVVPDQVTF 579
PD T+
Sbjct: 555 GCTPDDFTY 563
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 202/429 (47%), Gaps = 72/429 (16%)
Query: 50 GKVEEAV----RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSW 101
G+V EA+ R+ + VTY +++ K+G + A LF KM +RN+ V +
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLE---- 153
+ +I + ++A LF+ M + D +++ +I GK + ++L
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 154 --LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGK 207
++P D ++A+I + K+G+ +A++++N M + D ++YNS++ G+ +
Sbjct: 309 RNIIP---DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 208 MGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVT 259
+ A F+ M E ++V+++++++ + + + +LF +I + PN +++ T
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 260 MLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD 315
++ GF + GK+ A+ LF M + +VV++ ++ + ++++A+++F KM
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 316 ---GVS-WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFN 371
G+ + II+G K+D+A ++ + K + +
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD--------------------- 524
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDS 427
+ +N MI G C+ G + EA LFR+M + + ++N +I + + S
Sbjct: 525 ------VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578
Query: 428 AENIFQAME 436
+ + + M+
Sbjct: 579 SVELIEEMK 587
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/507 (20%), Positives = 221/507 (43%), Gaps = 79/507 (15%)
Query: 176 QFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWN 227
+ +DA +F M P+ + +N + + + + L L F + M E ++ +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 228 LMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSM--- 280
+M++ + L A + + P+ +++ T++ GF G+++EA L D M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 281 ---PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLD 333
P ++V+ + +I ++ EA+ L +M D V++ ++N + G
Sbjct: 170 KQRP--DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 334 EAREVYNQMPCKDIAAETA----LMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A +++ +M ++I A ++ L + G D+A +FN++ + D + ++S+I
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 386 AGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAMEERNI- 440
G C G+ D+ + R+M +N V+++ +I + + G++ A+ ++ M R I
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 441 ---VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
+++NSLI GF + + +A + LM +G +PD T+ G +L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYAL 553
I G I + N L+ + + G++ +A+++F + ++++ L+ G
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 554 NGYAIEAFKAFKQM----------------------------------LSEE-VVPDQVT 578
NG +A + F++M LS++ V PD VT
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 579 FIGMLSACSHAGLANQGLDLFKCMVED 605
+ M+ G ++ LF+ M ED
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKED 554
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 163/327 (49%), Gaps = 54/327 (16%)
Query: 43 IIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
I L K G ++A+ +F+ I ++VTY+S+I +GK D ++ +M RN+
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELL-ELVPD 157
+ D +++ +I + ++GKL +A+EL E++
Sbjct: 312 IP---------------------------DVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 158 KL--DTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLA 211
+ DT +N++I G+ K+ +A ++F+LM K D+V+Y+ ++ Y + ++
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 212 LHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCG 263
+ F +++ K N +++N +V GF SG L++A++LF+++ + P+ V++ +L G
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 264 FARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKMPHK----D 315
+G++ +A +F+ M + +N +I ++D+A LF + K D
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 316 GVSWTTIINGYIRVGKLDEAREVYNQM 342
V++ +I G + G L EA ++ +M
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 199/434 (45%), Gaps = 42/434 (9%)
Query: 269 KITEARRLFDSM----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV-----SW 319
K+ +A LF+SM P + +N + +A A+ Q D + F K +G+ +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTM 108
Query: 320 TTIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQL 373
T +IN Y R KL A V + P D + L++G GRV EA + +++
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEP--DTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 374 ----STRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQM 425
D + +++I G C GR+ EAL L +M + + V++ +++ ++G
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 426 DSAENIFQAMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
A ++F+ MEERNI V ++ +I ++ + DAL M +G K D T+
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF----TAIE 537
G ++ ++ I D+ +ALI ++ K G++ A++++ T
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 538 CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLD 597
D I++NSLI G+ EA + F M+S+ PD VT+ ++++ A + G+
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 598 LFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL---EEAFNVVRGMDVKANAGLWGSLL-GA 653
LF+ + + P Y+ LV + G+L +E F + V + +G LL G
Sbjct: 407 LFR-EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 654 C---RVHKNLEIGE 664
C ++K LEI E
Sbjct: 466 CDNGELNKALEIFE 479
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 217/430 (50%), Gaps = 44/430 (10%)
Query: 52 VEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNT 103
+EE + +F I ++V ++ ++S AK+ LF M +L S+N
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 104 MIAGYLHNS----MVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD-- 157
+I S + K+ E D + + +I + + ++ A +L+ + +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 158 -KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLAL 212
+ D +N +I G K G +DA ++F+ M D V+YNS++AG +G+ A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 213 HFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGF 264
M + NV+++ ++ FV G S A +L+E++ +P+ ++ +++ G
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 265 ARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DG 316
HG++ EA+++ D M K +VV++N +I + + ++DE KLF +M + D
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQMPCK-DIAAETALMSGLIQTGRVDEASKMFNQLST 375
+++ TII GY + G+ D A+E++++M + +I + L+ GL RV++A +F +
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 376 R----DTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDS 427
D +N +I G C+ G +++A DLFR + K + VS+ TMISG+ + Q D
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 428 AENIFQAMEE 437
++ +++ M+E
Sbjct: 470 SDLLYRKMQE 479
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 155/298 (52%), Gaps = 29/298 (9%)
Query: 48 KLGKVEEAVRVFS----NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLV 99
K+G V +AV +F + + + VTYNS+++ +G+ SDA +L M R N++
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELV 155
++ +I ++ EA KL++ M R D F++ +I G++++A+++L+L+
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 156 PDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKM 208
K D +N +I G+ K + + K+F M V D ++YN+++ GY Q G+
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 209 GLALHFFEKM-AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCG 263
A F +M + N+ ++++++ G + + A LFE + + ++ ++ G
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 264 FARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV 317
+ G + +A LF S+ CK +VVS+ MI+ + + Q D++ L+ KM +DG+
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM-QEDGL 482
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 182/404 (45%), Gaps = 29/404 (7%)
Query: 226 WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
W S +S +L LF K+ P P+ V + +L A+ LF M
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 282 C----KNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLD 333
++ S+N +I + + A+ + KM D V+ +++ING+ + ++
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 334 EAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
+A ++ ++M D+ ++ G + G V++A ++F+++ D + +NS++
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 386 AGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER--- 438
AG C SGR +A L R M + N +++ +I + + G+ A +++ M R
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 439 -NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
++ ++NSLI G + +A + L LM +G PD T+ G +L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC-VDLISWNSLISGYALNGY 556
+ + G + D N +I Y + GR ++A+++F+ ++ ++ +++ L+ G +N
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWR 396
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK 600
+A F+ M E+ D T+ ++ G DLF+
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 182/428 (42%), Gaps = 66/428 (15%)
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGKLDEAREVYNQMP 343
W + + ++E + LF KM P V ++ +++ + D +++ M
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 344 C----KDIAAETALMSGLIQTGR----VDEASKMFNQLSTRDTICWNSMIAGFCQSGRMD 395
D+ + +++ L + R + KM D + +S+I GFCQ R+
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 396 EALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLI 447
+A+DL +M + + V +NT+I G + G ++ A +F ME + V++NSL+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 448 TGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI 507
G + + DA + + M P+ TF
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITF----------------------------- 247
Query: 508 NDLFVSNALIAMYAKCGRVESAEQVFTAI--ECVD--LISWNSLISGYALNGYAIEAFKA 563
A+I ++ K G+ A +++ + CVD + ++NSLI+G ++G EA +
Sbjct: 248 ------TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 564 FKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG 623
M+++ +PD VT+ +++ + ++G LF+ M + + Y+ ++
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYF 360
Query: 624 RMGRLEEAFNVVRGMDVKANAGLWGSLL-GAC---RVHKNLEIGEFAAMRLSELEPHNAS 679
+ GR + A + MD + N + LL G C RV K L + F M+ SE+E +
Sbjct: 361 QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVL--FENMQKSEIELDITT 418
Query: 680 NYITLSNM 687
I + M
Sbjct: 419 YNIVIHGM 426
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/582 (22%), Positives = 275/582 (47%), Gaps = 109/582 (18%)
Query: 51 KVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
K+++AV +F + +++ ++ ++S AK K L ++M +NL
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNL-------- 110
Query: 107 GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTAC 163
G HN +++++++I C+ R+ +L A +L + + +
Sbjct: 111 GIPHN-----------------HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVT 153
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
++++ GY + S+A + + M V + V++N+++ G + K A+ ++M
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 220 EK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKIT 271
K ++V++ ++V+G GD A L K+ P + + T++ G ++ +
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
+A LF M K NVV+++++I+ + +A +L M + D +++ +I
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 324 NGYIRVGKLDEAREVYNQMPCKDI----AAETALMSGLIQTGRVDEASKMFNQLSTR--- 376
+ +++ GKL EA ++Y++M + I ++L++G R+DEA +MF + ++
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENI 431
D + +N++I GFC+ R++E +++FR+M ++ N+V++N +I G QAG D A+ I
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 432 FQAMEE----RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
F+ M NI+++N+L+ G +N K++V+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNG---KLEKAMVVF--------------------- 489
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLIS 543
EY+ +S ++ N +I K G+VE +F + D+++
Sbjct: 490 -----------EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 544 WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSA 585
+N++ISG+ G EA FK+M + +P+ + ++ A
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 218/447 (48%), Gaps = 72/447 (16%)
Query: 51 KVEEAV----RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLVSWN 102
++ EAV ++F N VT+N++I + K S+A L D+M Q +LV++
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTA 162
++ G + A L + M +GKLE
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKM----------------EQGKLEPG------------VL 257
Query: 163 CWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+N +I G K DA +F M K ++V+Y+S+++ G+ A M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 219 AEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKI 270
E+ +V +++ ++ FV G L A +L++++ +P+ V++ +++ GF H ++
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 271 TEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTI 322
EA+++F+ M K +VV++N +I + + +++E +++F +M + + V++ +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 323 INGYIRVGKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQL---ST 375
I G + G D A+E++ +M +I L+ GL + G++++A +F L
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 376 RDTI-CWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAEN 430
TI +N MI G C++G++++ DLF + K + V++NTMISG+ + G + A+
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 431 IFQAMEERNIVS----WNSLITGFLQN 453
+F+ M+E + +N+LI L++
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRD 584
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 181/366 (49%), Gaps = 40/366 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K +++A+ +F + I N+VTY+S+IS G+ SDA +L M +
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEK 147
R ++ +++ +I ++ + EA KL+D M +R +++ +I + +L++
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 148 ARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
A+++ E + K D +N +I G+ K + + +VF M + L V+YN ++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 201 GYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NP 252
G Q G +A F++M N++++N ++ G +G L A +FE + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF 308
++ M+ G + GK+ + LF ++ K +VV++N MI+ + + +EA LF
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 309 IKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA---LMSGLIQT 360
+M +DG + T+I +R G + + E+ +M A + + L++ ++
Sbjct: 560 KEM-KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618
Query: 361 GRVDEA 366
GR+D++
Sbjct: 619 GRLDKS 624
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 226/503 (44%), Gaps = 43/503 (8%)
Query: 250 PNPNAVSWVTMLCGFARHGKITEARRLFDSM-----PCKNVVSWNAMIAAYAQDLQIDEA 304
P P+ + + +L A+ K L + M P N +++ +I + + Q+ A
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP-HNHYTYSILINCFCRRSQLPLA 135
Query: 305 VKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSG 356
+ + KM + V+ ++++NGY ++ EA + +QM T L+ G
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 357 LIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPK----KN 408
L + EA + +++ + D + + ++ G C+ G D A +L +M +
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLV 464
+ +NT+I G + MD A N+F+ ME + N+V+++SLI+ + DA + L
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
M PD TF +L++ ++K + ++LI +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 525 RVESAEQVF---TAIECV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFI 580
R++ A+Q+F + C D++++N+LI G+ E + F++M +V + VT+
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 581 GMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRG 637
++ AG + ++FK MV D + P Y+ L+D L + G+LE+A F ++
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 638 MDVKANAGLWGSLL-GACRVHKNLEIG--EFAAMRLSELEPHNASNYITLSNMHAEAGRW 694
++ + ++ G C+ K +E G F + L ++P + Y T+ + G
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGK-VEDGWDLFCNLSLKGVKP-DVVAYNTMISGFCRKGSK 552
Query: 695 EEVERLRVLMRDKRAGKLP--GC 715
EE + L M++ G LP GC
Sbjct: 553 EEADALFKEMKED--GTLPNSGC 573
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 218/416 (52%), Gaps = 45/416 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAG-YLHNSMVEEASKL 120
++VT +S+++ + +ISDA L D+M + + +++ T+I G +LHN EA L
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-ASEAVAL 212
Query: 121 FDVMPER----DNFSWALMITCYTRKGKLEKARELL---ELVPDKLDTACWNAVIAGYAK 173
D M +R + ++ +++ ++G ++ A LL E + + ++ VI K
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Query: 174 KGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVS 225
DA +F M K ++++Y+S+++ + A M E+ NVV+
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 226 WNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+N ++ FV G L A +L++++ +P+ ++ +++ GF H ++ EA+ +F+ M
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLD 333
K NVV++N +I + + +IDE V+LF +M + + V++TT+I+G+ + D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 334 EAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQL---STRDTI-CWNSMI 385
A+ V+ QM +I L+ GL + G++++A +F L TI +N MI
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 386 AGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
G C++G++++ DLF + K + + +NTMISG+ + G + A+ +F+ M E
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 130/575 (22%), Positives = 267/575 (46%), Gaps = 109/575 (18%)
Query: 51 KVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIA 106
K+++A+ +F + ++ +N ++S AK K L +KM QR +S N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNL--- 120
Query: 107 GYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTAC 163
+++ ++I C+ R+ ++ A LL + +
Sbjct: 121 -----------------------YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
++++ GY + SDA + + M D +++ +++ G + K A+ ++M
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 220 EK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKIT 271
++ N+V++ ++V+G GD+ A L K+ N V + T++ ++
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
+A LF M K NV++++++I+ + +A +L M + + V++ +I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 324 NGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTRD-- 377
+ +++ GKL EA ++Y++M + DI ++L++G R+DEA MF + ++D
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 378 --TICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENI 431
+ +N++I GFC++ R+DE ++LFR+M ++ N+V++ T+I G+ QA D+A+ +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 432 FQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
F+ M NI+++N+L+ G +N K++V+
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNG---KLEKAMVVF--------------------- 493
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLIS 543
EY+ +S ++ N +I K G+VE +F ++ D+I
Sbjct: 494 -----------EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 544 WNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
+N++ISG+ G EA F++M + +PD T
Sbjct: 543 YNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 211/478 (44%), Gaps = 67/478 (14%)
Query: 164 WNAVIAGYAKKGQFSDA----EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+N +I + ++ Q S A K+ L +V+ +S+L GY ++ A+ ++M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 220 E----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKIT 271
E + +++ ++ G S A L +++ PN V++ ++ G + G I
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
A L + M NVV ++ +I + + D+A+ LF +M +K + ++++++I
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLSTR--- 376
+ + +A + + M + I AL+ ++ G++ EA K+++++ R
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 377 -DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENI 431
D ++S+I GFC R+DEA +F M K N V++NT+I+G+ +A ++D +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 432 FQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
F+ M +R N V++ +LI GF Q +A M +G P+ T+
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 488 XXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSL 547
+ + EY+ +S ++ N +I K G+VE +F ++
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL----------- 531
Query: 548 ISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+L G V PD + + M+S GL + LF+ M ED
Sbjct: 532 ----SLKG----------------VKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 220/467 (47%), Gaps = 47/467 (10%)
Query: 269 KITEARRLFDSM----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS-----W 319
K+ +A LF M P ++ +N +++A A+ + D + L KM + G+S +
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTY 123
Query: 320 TTIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQL 373
+IN + R ++ A + +M P I ++L++G R+ +A + +Q+
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 374 ST----RDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQM 425
DTI + ++I G + EA+ L +M ++ N V++ +++G + G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 426 DSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
D A N+ ME E N+V ++++I + DAL M +G +P+ T+
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT-----AI 536
++L +++ ++ NALI + K G++ AE+++ +I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
+ D+ +++SLI+G+ ++ EA F+ M+S++ P+ VT+ +++ A ++G+
Sbjct: 362 D-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLL-G 652
+LF+ M + + Y+ L+ + + A V + M V N + +LL G
Sbjct: 421 ELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 653 AC---RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
C ++ K + + E+ ++ S++EP + I + M +AG+ E+
Sbjct: 480 LCKNGKLEKAMVVFEY--LQRSKMEPTIYTYNIMIEGM-CKAGKVED 523
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 220/435 (50%), Gaps = 47/435 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLF 121
++VT NS+++ F +IS+A L D+M Q + V++ T++ G ++ EA L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 122 DVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKK 174
+ M + D ++ +I ++G+ + A LL + + D ++ VI K
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 175 GQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSW 226
DA +F M K D+ +Y+S+++ G+ A M E+ NVV++
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 227 NLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
N ++ F G L A +LF+++ +PN V++ +++ GF H ++ EA+++F M
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 283 K----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDE 334
K +VV++N +I + + ++ + ++LF M + + V++TT+I+G+ + D
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 335 AREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIA 386
A+ V+ QM +I L+ GL + G++++A +F L D +N M
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 387 GFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV- 441
G C++G++++ DLF + K + +++NTMISG+ + G + A +F M+E +
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 442 ---SWNSLITGFLQN 453
++N+LI L++
Sbjct: 554 DSGTYNTLIRAHLRD 568
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 147/631 (23%), Positives = 274/631 (43%), Gaps = 103/631 (16%)
Query: 43 IIHLGKLGKVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL 98
++HL K++EAV +F + ++V ++ ++S AK K +KM
Sbjct: 41 LLHL----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME---- 92
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 158
I G HN +++ +MI C R+ +L A +L
Sbjct: 93 ------ILGVSHNL-----------------YTYNIMINCLCRRSQLSFALAILG----- 124
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
K+ L +V+ NS+L G+ ++ A+ ++M
Sbjct: 125 -----------------------KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 219 AE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKI 270
E + V++ +V G S A L E++ P+ V++ ++ G + G+
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 271 TEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTI 322
A L + M +VV ++ +I + + +D+A+ LF +M +K D +++++
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQLSTR-- 376
I+ G+ +A + + M + I + LI + G++ EA K+F+++ R
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 377 --DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAEN 430
+ + +NS+I GFC R+DEA +F M K+ V++NT+I+G+ +A ++
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 431 IFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXX 486
+F+ M R N V++ +LI GF Q S +A M +G P+ T+
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 487 XXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLI 542
+ + EY+ KS D++ N + K G+VE +F ++ D+I
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
++N++ISG+ G EA+ F +M + +PD T+ ++ A G +L K M
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 603 VE-DFAIEPLAEHYSCLVDLLGRMGRLEEAF 632
FA + A Y + D+L GRL++ F
Sbjct: 582 RSCRFAGD--ASTYGLVTDMLHD-GRLDKGF 609
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 174/362 (48%), Gaps = 59/362 (16%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSN----TIHKNLVTYNSMISVFAKNGKISDARQLFD 91
VF + I L G+ +A R+ S+ I+ N+VT+NS+I FAK GK+ +A +LFD
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 92 KMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEK 147
+M QR N+V++N++I G+ + ++EA ++F +M +D
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP---------------- 378
Query: 148 ARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYT 203
D +N +I G+ K + D ++F M + L V+Y +++ G+
Sbjct: 379 ------------DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 204 QNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAV 255
Q A F++M N++++N ++ G +G L A +FE + P+
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
++ M G + GK+ + LF S+ K +V+++N MI+ + + +EA LFIKM
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 312 ----PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA---LMSGLIQTGRVD 364
P D ++ T+I ++R G + E+ +M A + + L++ ++ GR+D
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLD 606
Query: 365 EA 366
+
Sbjct: 607 KG 608
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 216/467 (46%), Gaps = 43/467 (9%)
Query: 267 HGKITEARRLFDSM----PCKNVVSWNAMIAAYAQ----DLQIDEAVKLFIKMPHKDGVS 318
H K+ EA LF M P ++V ++ +++A A+ DL I K+ I + +
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 319 WTTIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMFNQ 372
+ +IN R +L A + +M P I +L++G R+ EA + +Q
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGP--SIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 373 LS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQ 424
+ DT+ + +++ G Q + EA+ L +M K V++ +I+G + G+
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 425 MDSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXX 480
D A N+ ME E ++V ++++I + DAL M +G +PD T+
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 481 XXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI--EC 538
++L +L+ ++ N+LI +AK G++ AE++F +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 539 VD--LISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGL 596
+D ++++NSLI+G+ ++ EA + F M+S++ +PD VT+ +++ A G+
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 597 DLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLL-G 652
+LF+ M + Y+ L+ + + A V + M V N + +LL G
Sbjct: 401 ELFRDMSRRGLVGNTVT-YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 653 AC---RVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
C ++ K + + E+ ++ S++EP + Y +S +AG+ E+
Sbjct: 460 LCKNGKLEKAMVVFEY--LQKSKMEP-DIYTYNIMSEGMCKAGKVED 503
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/590 (23%), Positives = 271/590 (45%), Gaps = 74/590 (12%)
Query: 115 EEASKLFDVMPERDNFSWA------LMITCYTRKGKLEKARELLEL------VPDKLDTA 162
E AS +F + E + ++ L++ Y+R ++KA ++ L +P L
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS-- 171
Query: 163 CWNAVI-AGYAKKGQFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEK 217
+NAV+ A K S AE VF M ++ +YN ++ G+ G + +AL F+K
Sbjct: 172 -YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 218 MAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGK 269
M K NVV++N ++ G+ + +L + PN +S+ ++ G R G+
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 270 ITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTT 321
+ E + M + + V++N +I Y ++ +A+ + +M +++T+
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 322 IINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLS--- 374
+I+ + G ++ A E +QM C + T L+ G Q G ++EA ++ +++
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 375 -TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAE 429
+ + +N++I G C +G+M++A+ + M +K + VS++T++SG+ ++ +D A
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 430 NIFQAMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
+ + M E+ I ++++SLI GF + +A M R G PD+ T+
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF------------ 533
+ QLH +++ G + D+ + LI K R A+++
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 534 ----TAIE-C--VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
T IE C ++ S SLI G+ + G EA + F+ ML + PD + M+
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 587 SHAGLANQGLDLFKCMVED-FAIEPLAEHYSCLVDLLGRMGRLEEAFNVV 635
AG + L+K MV+ F + + LV L + G++ E +V+
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVT--VIALVKALHKEGKVNELNSVI 698
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 229/503 (45%), Gaps = 107/503 (21%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEAS 118
+ N+ TYN +I F G I A LFDKM + N+V++NT+I GY +++
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260
Query: 119 KLFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGY 171
KL M E + S+ ++I R+G++++ +L + + LD +N +I GY
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 172 AKKGQFSD-----------------------------------AEKVFNLMPVKDLV--- 193
K+G F A + + M V+ L
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 194 -SYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEK 248
+Y +++ G++Q G M A +M + +VV++N +++G +G + A + E
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 249 IP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQ 300
+ +P+ VS+ T+L GF R + EA R+ M K + ++++++I + + +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 301 IDEAVKLF-----IKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCK----DIAAET 351
EA L+ + +P D ++T +IN Y G L++A +++N+M K D+ +
Sbjct: 501 TKEACDLYEEMLRVGLP-PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 352 ALMSGLIQTGRVDEASKMFNQLSTRDTI------------CWN-------SMIAGFCQSG 392
L++GL + R EA ++ +L +++ C N S+I GFC G
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 393 RMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLIT 448
M EA +F M KN ++N MI G+ +AG + A +++ M + +
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK----------S 669
Query: 449 GFLQNSLYFDALKSLVLMGREGK 471
GFL +++ AL + + +EGK
Sbjct: 670 GFLLHTVTVIAL--VKALHKEGK 690
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 119/274 (43%), Gaps = 49/274 (17%)
Query: 379 ICWNSMIAGFCQSGR-MDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQ 433
+ +N+++ +S R + A ++F++M + N ++N +I G+ AG +D A +F
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 434 AMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
ME + N+V++N+LI G+ + D K L M +G +P+
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN--------------- 274
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWN 545
L N +I + GR++ V T + +D +++N
Sbjct: 275 --------------------LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+LI GY G +A +ML + P +T+ ++ + AG N+ ++ M
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RV 373
Query: 606 FAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+ P Y+ LVD + G + EA+ V+R M+
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 213/439 (48%), Gaps = 68/439 (15%)
Query: 54 EAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMI 105
EAV +F + L +T+N++I+ G++ +A L +KM + L V++ T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 106 AGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWN 165
G + A L M E K D ++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEE----------------------------THIKPDVVIYS 300
Query: 166 AVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
A+I K G SDA+ +F+ M K ++ +YN M+ G+ G+ A M E+
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 222 ----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEA 273
+V+++N ++S V G L A +L +++ + P+ V++ +M+ GF +H + +A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 274 RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRV 329
+ +FD M +VV++N +I Y + ++DE ++L ++ + + ++ T+I+G+ V
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 330 GKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFN--QLST--RDTICW 381
L+ A++++ +M C D L+ G + +++EA ++F Q+S DT+ +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME- 436
N +I G C+ ++DEA DLF +P + + ++N MISG+ + A +F M+
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 437 ---ERNIVSWNSLITGFLQ 452
E + ++N+LI G L+
Sbjct: 601 NGHEPDNSTYNTLIRGCLK 619
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 202/394 (51%), Gaps = 48/394 (12%)
Query: 48 KLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLV 99
K+G + A+ + S I ++V Y+++I K+G SDA+ LF +M ++ N+
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELV 155
++N MI G+ +A +L M ER D ++ +I+ ++GKL +A +L + +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 156 PDKL---DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ DT +N++I G+ K +F DA+ +F+LM D+V++N+++ Y + ++ +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 213 HFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGF 264
+++ + N ++N ++ GF +L++A+ LF+++ + P+ ++ +L GF
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 265 ARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDG 316
+ K+ EA LF+ + + V++N +I + ++DEA LF +P D
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE------TALMSGLIQTGRVDEASKMF 370
++ +I+G+ + +A ++++M KD E L+ G ++ G +D++ ++
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 371 NQLSTRD------TICWNSMIAGFCQSGRMDEAL 398
+++ + TI M+A GR+D++
Sbjct: 631 SEMRSNGFSGDAFTI---KMVADLITDGRLDKSF 661
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 137/606 (22%), Positives = 247/606 (40%), Gaps = 121/606 (19%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLF 121
N+ ++N +I F K+S + F K++ Q ++V++NT++ G + EA LF
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 122 DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAE 181
M E G+ + D
Sbjct: 200 GYMVE------------------------------------------TGFLEAVALFDQM 217
Query: 182 KVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSG 237
L PV ++++N+++ G G++ A KM K +VV++ +V+G G
Sbjct: 218 VEIGLTPV--VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 238 DLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWN 289
D SA L K+ P+ V + ++ + G ++A+ LF M K NV ++N
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 290 AMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
MI +G+ G+ +A+ + M ++I
Sbjct: 336 CMI-------------------------------DGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 350 ET----ALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLF 401
+ AL+S ++ G++ EA K+ +++ R DT+ +NSMI GFC+ R D+A +F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 402 RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SWNSLITGFLQNSLYF 457
M + V++NT+I Y +A ++D + + + R +V ++N+LI GF +
Sbjct: 425 DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
A M G PD T + +L E I S D N +I
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 518 AMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
K +V+ A +F ++ D+ ++N +ISG+ +A F +M
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVED------FAIEPLAEHYSCLVDLLGRMGR 627
PD T+ ++ C AG ++ ++L M + F I+ +A DL+ GR
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVA-------DLITD-GR 656
Query: 628 LEEAFN 633
L+++F+
Sbjct: 657 LDKSFS 662
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 169/358 (47%), Gaps = 53/358 (14%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLF 90
+VF N I G+ +A R+ + I + +++T+N++IS K GK+ +A +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 91 DKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLE 146
D+M R + V++N+MI G+ ++ ++A +FD+M D ++ +I Y R +++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 147 KARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLM----PVKDLVSYNSML 199
+ +LL + + +T +N +I G+ + + A+ +F M D ++ N +L
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 200 AGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----N 251
G+ +N K+ AL FE + + + V++N+++ G + A LF +P
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
P+ ++ M+ GF I++A LF M D
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMK--------------------DNG------- 602
Query: 312 PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET---ALMSGLIQTGRVDEA 366
D ++ T+I G ++ G++D++ E+ ++M + + +++ LI GR+D++
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKS 660
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 25/246 (10%)
Query: 394 MDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNS 445
+D+A+D F R P +V N +I + + + D A ++++ ME R NI S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
LI F +L + + + G +PD TF L Y++++G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
++ + + + ++ E T + +I++N+LI+G L G +EA
Sbjct: 207 FLEAVALFDQMV------------EIGLTPV----VITFNTLINGLCLEGRVLEAAALVN 250
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRM 625
+M+ + + D VT+ +++ G L+L M E+ I+P YS ++D L +
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAIIDRLCKD 309
Query: 626 GRLEEA 631
G +A
Sbjct: 310 GHHSDA 315
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 122/309 (39%), Gaps = 35/309 (11%)
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQ 390
+R Y + C + + ++ R D A ++ ++ R + +N +I FC
Sbjct: 100 SRPFYTAVDCNKV------IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153
Query: 391 SGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
++ +L F ++ K + V++NT++ G ++ A +F M E
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE--------- 204
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
TGFL+ FD + + G P TF L ++ G
Sbjct: 205 -TGFLEAVALFDQMVEI------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAFK 562
D+ ++ K G +SA + + +E D++ ++++I +G+ +A
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
F +ML + + P+ T+ M+ G + L + M+E I P ++ L+
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISAS 376
Query: 623 GRMGRLEEA 631
+ G+L EA
Sbjct: 377 VKEGKLFEA 385
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 136/607 (22%), Positives = 277/607 (45%), Gaps = 78/607 (12%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV----SWNTMI 105
G V E V S+ I+ Y+ I V +K G + A+ LFD M L+ ++ ++I
Sbjct: 333 GLVHEMV---SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 106 AGYLHNSMVEEASKLFDVMPERD----NFSWALMITCYTRKGKLEKARELL-ELVPD--K 158
GY V + +L M +R+ +++ ++ G L+ A ++ E++ +
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHF 214
+ + +I + + +F DA +V M D+ YNS++ G ++ +M A F
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 215 FEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFAR 266
+M E N ++ +SG++ + + +SA + +++ PN V ++ + +
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGY 326
GK+ EA + SM +D+ + D ++T ++NG
Sbjct: 570 KGKVIEACSAYRSM--------------------VDQGI-------LGDAKTYTVLMNGL 602
Query: 327 IRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLS----TRDT 378
+ K+D+A E++ +M K IA + L++G + G + +AS +F+++ T +
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQA 434
I +N ++ GFC+SG +++A +L +M K N+V++ T+I GY ++G + A +F
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 435 MEERNIVSWNSLITGFLQNSLYF-DALKSLVLMGREGK------KPDQSTFXXXXXXXXX 487
M+ + +V + + T + D +++ + G K P +
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 488 XXXXQVGNQLHEYIL-KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL----I 542
+V N+L + + G ND+ N +I K G +E+A+++F ++ +L I
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 543 SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCM 602
++ SL++GY G E F F + ++ + PD + + +++A G+ + L L M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 603 VEDFAIE 609
A++
Sbjct: 902 FAKNAVD 908
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 231/510 (45%), Gaps = 84/510 (16%)
Query: 54 EAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMI 105
+A+RV I ++ YNS+I +K ++ +AR +M + N ++ I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 106 AGYLHNSMVEEASKLFDVMPERDNFSWALMITC----YTRKGKLEKARELLELVPDKL-- 159
+GY+ S A K M E ++ T Y +KGK+ +A + D+
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 160 -DTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHF 214
D + ++ G K + DAE++F M K D+ SY ++ G+++ G M A
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 215 FEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR 266
F++M E+ NV+ +N+++ GF SG++ A++L +++ +PNAV++ T++ G+ +
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGY 326
G + EA RLFD M K +V D +TT+++G
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVP---------------------------DSFVYTTLVDGC 742
Query: 327 IRVGKLDEAREVY--NQMPCKDIAAE-TALMSGLIQTGRVDEASKMFNQL--------ST 375
R+ ++ A ++ N+ C A AL++ + + G+ + +++ N+L
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGYAQAGQMDSAENI 431
+ + +N MI C+ G ++ A +LF QM N +++ ++++GY + G+ +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 432 FQ----AMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGR--------EGKKPDQSTFX 479
F A E + + ++ +I FL+ + K+LVL+ + +G K ST
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGM---TTKALVLVDQMFAKNAVDDGCKLSISTCR 919
Query: 480 XXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
+V ++ E +++ YI D
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/622 (20%), Positives = 266/622 (42%), Gaps = 103/622 (16%)
Query: 50 GKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGY- 108
G +EEAV VFS+++ LV ++S + L D L+ WN + +
Sbjct: 165 GYIEEAVFVFSSSMGLELVP------------RLSRCKVLLDA-----LLRWNRLDLFWD 207
Query: 109 LHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVI 168
++ MVE + +FDV ++ ++I + R G ++ +++L + TA N
Sbjct: 208 VYKGMVER-NVVFDVK------TYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDG 260
Query: 169 AGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV---- 224
A K+ L+P+K +Y+ ++ G + ++ A +M V
Sbjct: 261 ALKLKESMICKG-----LVPLK--YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH 313
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSM 280
+++L++ G + + +A+ L ++ N + +C ++ G + +A+ LFD M
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 281 PCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV----SWTTIINGYIRVGKL 332
++ ++ ++I Y ++ + + +L ++M ++ V ++ T++ G G L
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 333 DEAREVYNQM---PCK-DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSM 384
D A + +M C+ ++ T L+ +Q R +A ++ ++ + D C+NS+
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 385 IAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE--- 437
I G ++ RMDEA +M K N+ ++ ISGY +A + SA+ + M E
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 438 ---------------------------RNIV---------SWNSLITGFLQNSLYFDALK 461
R++V ++ L+ G +N DA +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 462 SLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYA 521
M +G PD ++ Q + + + +++ G ++ + N L+ +
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 522 KCGRVESAEQVFTAIECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
+ G +E A+++ + L +++ ++I GY +G EAF+ F +M + +VPD
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 578 TFIGMLSACSHAGLANQGLDLF 599
+ ++ C + + +F
Sbjct: 734 VYTTLVDGCCRLNDVERAITIF 755
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/566 (21%), Positives = 252/566 (44%), Gaps = 105/566 (18%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLF 121
N+V Y ++I F +N + DA ++ +M ++ ++ +N++I G ++EA
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 122 DVMPER----DNFSWALMITCYTRKGKLEKA----RELLE--LVPDKLDTACWNAVIAGY 171
M E + F++ I+ Y + A +E+ E ++P+K+ +I Y
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV---LCTGLINEY 567
Query: 172 AKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NV 223
KKG+ +A + M + D +Y ++ G +N K+ A F +M K +V
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDS 279
S+ ++++GF G++ A +F+++ PN + + +L GF R G+I +A+ L D
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 280 MPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGK 331
M K N V++ +I Y + + EA +LF +M K D +TT+++G R+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 332 LDEAREVY--NQMPCKDIAAE-TALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGF 388
++ A ++ N+ C A AL++ + + G+ + +++ N+L
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL--------------- 792
Query: 389 CQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERN----IVSWN 444
MD + D F K N V++N MI + G +++A+ +F M+ N ++++
Sbjct: 793 -----MDGSFDRF---GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 445 SLITGFLQ---NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYI 501
SL+ G+ + + F + G E PD + +
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIE---PDHIMYS---------------------V 880
Query: 502 LKSGYINDLFVSNALI---AMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAI 558
+ + ++ + + AL+ M+AK + + + + + +L+SG+A G
Sbjct: 881 IINAFLKEGMTTKALVLVDQMFAKNAVDDGCK--------LSISTCRALLSGFAKVGEME 932
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLS 584
A K + M+ + +PD T I +++
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELIN 958
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/602 (22%), Positives = 270/602 (44%), Gaps = 61/602 (10%)
Query: 92 KMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARE- 150
++ N ++ +I YL M++++ ++F +M F+ ++ TC G + K+ E
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLY-GFNPSVY-TCNAILGSVVKSGED 214
Query: 151 ------LLELVPDKL--DTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSM 198
L E++ K+ D A +N +I +G F + + M +V+YN++
Sbjct: 215 VSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTV 274
Query: 199 LAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSA----RQLFEKIP 250
L Y + G+ A+ + M K +V ++N+++ S ++ R + +++
Sbjct: 275 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 251 NPNAVSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWNAMIAAYAQDLQIDEAVK 306
+PN V++ T++ GF+ GK+ A +L + M N V++NA+I + + EA+K
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 394
Query: 307 LFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLI 358
+F M K VS+ +++G + + D AR Y +M C T ++ GL
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 454
Query: 359 QTGRVDEASKMFNQLST----RDTICWNSMIAGFCQSGRMDEALD----LFRQMPKKNSV 410
+ G +DEA + N++S D + ++++I GFC+ GR A + ++R N +
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Query: 411 SWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLITGFLQNSLYFDALKSLVLM 466
++T+I + G + A I++AM R+ ++N L+T + +A + + M
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574
Query: 467 GREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRV 526
+G P+ +F + + + K G+ F +L+ K G +
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 527 ESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGM 582
AE+ ++ VD + +N+L++ +G +A F +M+ ++PD T+ +
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Query: 583 LSACSHAGLANQGLDLFKCMVEDFA-----IEPLAEHYSCLVDLLGRMGRLEEAFNVVRG 637
+S GL +G + + A + P Y+C VD + + G+ +
Sbjct: 695 IS-----GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 749
Query: 638 MD 639
MD
Sbjct: 750 MD 751
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/632 (20%), Positives = 286/632 (45%), Gaps = 67/632 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLF 121
+VTYN+++ + K G+ A +L D M + ++ ++N +I ++ + + L
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326
Query: 122 DVMPER----DNFSWALMITCYTRKGKLEKARELLE------LVPDKLDTACWNAVIAGY 171
M +R + ++ +I ++ +GK+ A +LL L P+ + +NA+I G+
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT---FNALIDGH 383
Query: 172 AKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHFFEKMAEKNV---- 223
+G F +A K+F +M K L VSY +L G +N + LA F+ +M V
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Query: 224 VSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEAR----R 275
+++ M+ G +G L A L ++ +P+ V++ ++ GF + G+ A+ R
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 276 LFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRVGK 331
++ N + ++ +I + + EA++++ M +D ++ ++ + GK
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 332 LDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASKMFNQLST----RDTICWNS 383
+ EA E M I T L++G +G +A +F++++ + S
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 384 MIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERN 439
++ G C+ G + EA + + ++V +NT+++ ++G + A ++F M +R+
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 440 IV----SWNSLITGFLQNSLYFDALKSLVLMGREGKK-----PDQSTFXXXXXXXXXXXX 490
I+ ++ SLI+G + A +L +E + P++ +
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIA----ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI----ECVDLISWNS 546
+ G E + G+ D+ +NA+I Y++ G++E + + +L ++N
Sbjct: 740 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 799
Query: 547 LISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF 606
L+ GY+ +F ++ ++ ++PD++T ++ + + GL + K +
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR- 858
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM 638
+E ++ L+ G + AF++V+ M
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVM 890
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 128/640 (20%), Positives = 278/640 (43%), Gaps = 85/640 (13%)
Query: 56 VRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVE 115
+R+ N + +TY MI KNG + +A L ++MS+ +
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI----------------- 474
Query: 116 EASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL------LELVPDKLDTACWNAVIA 169
+ D +++ +I + + G+ + A+E+ + L P+ + ++ +I
Sbjct: 475 ----------DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI---IYSTLIY 521
Query: 170 GYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----K 221
+ G +A +++ M + +D ++N ++ + GK+ A F M
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLF 277
N VS++ +++G+ NSG+ A +F+++ +P ++ ++L G + G + EA +
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 278 DSM----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRV 329
S+ + V +N ++ A + + +AV LF +M + D ++T++I+G R
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 330 GKL-------DEAREVYNQMPCKDIAAETALMSGLIQTGR----VDEASKMFNQLSTRDT 378
GK EA N +P K T + G+ + G+ + +M N T D
Sbjct: 702 GKTVIAILFAKEAEARGNVLPNK--VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQA 434
+ N+MI G+ + G++++ DL +M +N ++N ++ GY++ + ++ ++++
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 819
Query: 435 MEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
+ I ++ +SL+ G ++++ LK L G + D+ TF
Sbjct: 820 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNS 546
L + + G D +A++++ + R + + V + + +
Sbjct: 880 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 939
Query: 547 LISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDF 606
LI+G G AF ++M++ ++ P V M+ A + G A++ L + M++
Sbjct: 940 LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK-M 998
Query: 607 AIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL 646
+ P ++ L+ L + G + EA + V +N GL
Sbjct: 999 KLVPTIASFTTLMHLCCKNGNVIEALEL---RVVMSNCGL 1035
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 213/439 (48%), Gaps = 68/439 (15%)
Query: 54 EAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMI 105
EAV +F + L +T+N++I+ G++ +A L +KM + L V++ T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 106 AGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWN 165
G + A L M E K D ++
Sbjct: 269 NGMCKMGDTKSALNLLSKMEE----------------------------THIKPDVVIYS 300
Query: 166 AVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK 221
A+I K G SDA+ +F+ M K ++ +YN M+ G+ G+ A M E+
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 222 ----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEA 273
+V+++N ++S V G L A +L +++ + P+ V++ +M+ GF +H + +A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 274 RRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRV 329
+ +FD M +VV++N +I Y + ++DE ++L ++ + + ++ T+I+G+ V
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 330 GKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFN--QLST--RDTICW 381
L+ A++++ +M C D L+ G + +++EA ++F Q+S DT+ +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAME- 436
N +I G C+ ++DEA DLF +P + + ++N MISG+ + A +F M+
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 437 ---ERNIVSWNSLITGFLQ 452
E + ++N+LI G L+
Sbjct: 601 NGHEPDNSTYNTLIRGCLK 619
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 191/365 (52%), Gaps = 39/365 (10%)
Query: 48 KLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLV 99
K+G + A+ + S I ++V Y+++I K+G SDA+ LF +M ++ N+
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELV 155
++N MI G+ +A +L M ER D ++ +I+ ++GKL +A +L + +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 156 PDKL---DTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLAL 212
+ DT +N++I G+ K +F DA+ +F+LM D+V++N+++ Y + ++ +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 213 HFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGF 264
+++ + N ++N ++ GF +L++A+ LF+++ + P+ ++ +L GF
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 265 ARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDG 316
+ K+ EA LF+ + + V++N +I + ++DEA LF +P D
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 317 VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE------TALMSGLIQTGRVDEASKMF 370
++ +I+G+ + +A ++++M KD E L+ G ++ G +D++ ++
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 371 NQLST 375
+++ +
Sbjct: 631 SEMRS 635
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 129/564 (22%), Positives = 229/564 (40%), Gaps = 99/564 (17%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEAS 118
I N+ ++N +I F K+S + F K++ Q ++V++NT++ G + EA
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 119 KLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFS 178
LF M E G+ +
Sbjct: 197 ALFGYMVE------------------------------------------TGFLEAVALF 214
Query: 179 DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFV 234
D L PV ++++N+++ G G++ A KM K +VV++ +V+G
Sbjct: 215 DQMVEIGLTPV--VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 235 NSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVV 286
GD SA L K+ P+ V + ++ + G ++A+ LF M K NV
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKD 346
++N MI + + +A +L M ++ IN D
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIERE-------IN--------------------PD 365
Query: 347 IAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFR 402
+ AL+S ++ G++ EA K+ +++ R DT+ +NSMI GFC+ R D+A +F
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425
Query: 403 QMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SWNSLITGFLQNSLYFD 458
M + V++NT+I Y +A ++D + + + R +V ++N+LI GF +
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
A M G PD T + +L E I S D N +I
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 519 MYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
K +V+ A +F ++ D+ ++N +ISG+ +A F +M P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 575 DQVTFIGMLSACSHAGLANQGLDL 598
D T+ ++ C AG ++ ++L
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIEL 629
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 152/304 (50%), Gaps = 27/304 (8%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLF 90
+VF N I G+ +A R+ + I + +++T+N++IS K GK+ +A +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 91 DKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLE 146
D+M R + V++N+MI G+ ++ ++A +FD+M D ++ +I Y R +++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 147 KARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLM----PVKDLVSYNSML 199
+ +LL + + +T +N +I G+ + + A+ +F M D ++ N +L
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 200 AGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----N 251
G+ +N K+ AL FE + + + V++N+++ G + A LF +P
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 252 PNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKL 307
P+ ++ M+ GF I++A LF M + ++N +I + +ID++++L
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 308 FIKM 311
+M
Sbjct: 630 ISEM 633
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 138/275 (50%), Gaps = 24/275 (8%)
Query: 48 KLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
K GK+ EA ++ +H+ + VTYNSMI F K+ + DA+ +FD M+ ++V++NT
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT 437
Query: 104 MIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPDK 158
+I Y V+E +L + R + ++ +I + L A++L E++
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 159 L--DTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLAL 212
+ DT N ++ G+ + + +A ++F ++ + D V+YN ++ G + K+ A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 213 HFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGF 264
F + E +V ++N+M+SGF +S A LF K+ + P+ ++ T++ G
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDL 299
+ G+I ++ L M N S +A A+++
Sbjct: 618 LKAGEIDKSIELISEMR-SNGFSGDAFTIKMAEEI 651
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 25/246 (10%)
Query: 394 MDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNS 445
+D+A+D F R P +V N +I + + + D A ++++ ME R NI S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
LI F +L + + + G +PD TF L Y++++G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFK 565
++ + + + ++ E T + +I++N+LI+G L G +EA
Sbjct: 207 FLEAVALFDQMV------------EIGLTPV----VITFNTLINGLCLEGRVLEAAALVN 250
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRM 625
+M+ + + D VT+ +++ G L+L M E+ I+P YS ++D L +
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAIIDRLCKD 309
Query: 626 GRLEEA 631
G +A
Sbjct: 310 GHHSDA 315
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 122/309 (39%), Gaps = 35/309 (11%)
Query: 335 AREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQ 390
+R Y + C + + ++ R D A ++ ++ R + +N +I FC
Sbjct: 100 SRPFYTAVDCNKV------IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153
Query: 391 SGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSL 446
++ +L F ++ K + V++NT++ G ++ A +F M E
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE--------- 204
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
TGFL+ FD + + G P TF L ++ G
Sbjct: 205 -TGFLEAVALFDQMVEI------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAFK 562
D+ ++ K G +SA + + +E D++ ++++I +G+ +A
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLL 622
F +ML + + P+ T+ M+ G + L + M+E I P ++ L+
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISAS 376
Query: 623 GRMGRLEEA 631
+ G+L EA
Sbjct: 377 VKEGKLFEA 385
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 223/479 (46%), Gaps = 44/479 (9%)
Query: 206 GKMGLALHFFEKMAEKN----VVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSW 257
G++ AL F + E+ +VS N ++ G ++ + A +L + P PN V++
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTF 289
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMPH 313
T++ GF + G++ A LF M + + ++++ +I Y + + KLF + H
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 314 K----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDE 365
K D V +++ I+ Y++ G L A VY +M C+ I+ T L+ GL Q GR+ E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 366 ASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMIS 417
A M+ Q+ R + ++S+I GFC+ G + L+ M K + V + ++
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 418 GYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKP 473
G ++ G M A M + N+V +NSLI G+ + + + +ALK LMG G KP
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 474 DQSTFXXXXXXXXXX------XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVE 527
D +TF +G QL + + ++ D+ V N +I + KC R+E
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 528 SAEQVF-TAIEC---VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGML 583
A + F IE D++++N++I GY EA + F+ + P+ VT ++
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ + +F M E + +P A Y CL+D + +E +F + M K
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 140/573 (24%), Positives = 258/573 (45%), Gaps = 101/573 (17%)
Query: 51 KVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
++E A R+ S + N+VT+ ++I+ F K G++ A LF M QR +L++++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTA 162
T+I GY M+ KLF S AL KG KLD
Sbjct: 326 TLIDGYFKAGMLGMGHKLF---------SQAL------HKGV-------------KLDVV 357
Query: 163 CWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKM----GLALHF 214
+++ I Y K G + A V+ M + ++V+Y ++ G Q+G++ G+
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 215 FEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKI 270
++ E ++V+++ ++ GF G+L S L+E + P+ V + ++ G ++ G +
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 271 TEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTI 322
A R M + NVV +N++I + + + DEA+K+F M D ++TT+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 323 I------NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEASKMFNQ 372
+ + + + K ++++ M I+A+ A+ + +I + R+++ASK FN
Sbjct: 538 MRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 597
Query: 373 LSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIF 432
L G+M+ + V++NTMI GY ++D AE IF
Sbjct: 598 LI----------------EGKMEPDI-----------VTYNTMICGYCSLRRLDEAERIF 630
Query: 433 QAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX 488
+ ++ N V+ LI +N+ A++ +M +G KP+ T+
Sbjct: 631 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 690
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-TAIEC---VDLISW 544
+ +L E + + G + + +I K GRV+ A +F AI+ D++++
Sbjct: 691 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 750
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
LI GY G +EA ++ ML V PD +
Sbjct: 751 AILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 219/457 (47%), Gaps = 69/457 (15%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEAS 118
I NL TY+ I+ F + ++S A + KM + ++V+ N+++ G+ H + + EA
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 119 KLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFS 178
L D M E + PD T + ++ G + + S
Sbjct: 166 ALVDQMVE-------------------------MGYQPD---TVTFTTLVHGLFQHNKAS 197
Query: 179 DAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMV 230
+A + M VK DLV+Y +++ G + G+ LAL+ KM E +VV +N ++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 231 SGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV- 285
G + A LF K+ P+ ++ ++ +G+ ++A RL M KN+
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 286 ---VSWNAMIAAYAQDLQIDEAVKLF---IKMPH--KDGVSWTTIINGYIRVGKLDEARE 337
V +NA+I A+ ++ ++ EA KL+ +K H D V++ T+I G+ + +++E E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 338 VYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLST----RDTICWNSMIAGFC 389
V+ +M + + T L+ G Q D A +F Q+ + D + +N ++ G C
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 390 QSGRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAMEER----NIV 441
+G ++ AL +F M K++ V++ TMI +AG+++ ++F ++ + N+V
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 442 SWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
++ ++++GF + L +A V M +G P+ T+
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 128/548 (23%), Positives = 230/548 (41%), Gaps = 89/548 (16%)
Query: 161 TACWNAVIAGYAKKG-------------QFSDAEKVFNLM----PVKDLVSYNSMLAGYT 203
T CW AG + + DA +F M P +V ++ +L+
Sbjct: 27 TLCWERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIA 86
Query: 204 QNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAV 255
+ K L + E+M N+ ++++ ++ F LS A + K+ P+ V
Sbjct: 87 KMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIV 146
Query: 256 SWVTMLCGFARHGKITEARRLFDSM------PCKNVVSWNAMIAAYAQDLQIDEAVKLFI 309
+ ++L GF +I+EA L D M P + V++ ++ Q + EAV L
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQP--DTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 310 KMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTG 361
+M K D V++ +ING + G+ D A + N+M I A+ ++ GL +
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 362 RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS----VSWN 413
+D+A +FN++ T+ D +N +I+ C GR +A L M +KN V +N
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 414 TMISGYAQAGQMDSAENIFQAMEER-----NIVSWNSLITGFLQNSLYFDALKSLVLMGR 468
+I + + G++ AE ++ M + ++V++N+LI GF + + ++ M +
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 469 EGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVES 528
G VGN + L G+ NA +
Sbjct: 385 RG---------------------LVGNTVTYTTLIHGFFQARDCDNAQMVF--------- 414
Query: 529 AEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSH 588
+Q+ + D++++N L+ G NG A F+ M ++ D VT+ M+ A
Sbjct: 415 -KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 589 AGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAG 645
AG G DLF C + ++P Y+ ++ R G EEA F ++ N+G
Sbjct: 474 AGKVEDGWDLF-CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 646 LWGSLLGA 653
+ +L+ A
Sbjct: 533 TYNTLIRA 540
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 53/288 (18%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKN----LVTYNSMISVFAKNGKISDARQLFD 91
VF N I L G+ +A R+ S+ + KN LV +N++I F K GK+ +A +L+D
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 92 KMSQR-----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLE 146
+M + ++V++NT+I G+ VEE ++F M +R
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG--------------- 389
Query: 147 KARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGY 202
+T + +I G+ + +A+ VF M D+++YN +L G
Sbjct: 390 -------------NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 203 TQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNA 254
NG + AL FE M ++ ++V++ M+ +G + LF + PN
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 255 VSWVTMLCGFARHGKITEARRLFDSM----PCKNVVSWNAMIAAYAQD 298
V++ TM+ GF R G EA LF M P N ++N +I A +D
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 166/358 (46%), Gaps = 58/358 (16%)
Query: 40 NQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L K +++A +F + I ++ TYN +IS G+ SDA +L M +
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 96 RN----LVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL 151
+N LV +N +I ++ + EA KL+D M + + C+
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH--------CFP----------- 354
Query: 152 LELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGK 207
D +N +I G+ K + + +VF M + L V+Y +++ G+ Q
Sbjct: 355 --------DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 208 MGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVT 259
A F++M +++++N+++ G N+G++ +A +FE + + V++ T
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 260 MLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKM---- 311
M+ + GK+ + LF S+ K NVV++ M++ + + +EA LF++M
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 312 PHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA---LMSGLIQTGRVDEA 366
P + ++ T+I +R G + E+ +M A + + L++ ++ GR+D++
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKS 584
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 160/670 (23%), Positives = 300/670 (44%), Gaps = 68/670 (10%)
Query: 46 LGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRN 97
LG+ GK+ EA + ++VTY +I K+ A+++F+KM + +
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLE 153
V++ T++ + N ++ + + M + D ++ +++ + G +A + L+
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 154 LVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMP---VKDLV-SYNSMLAGYTQNG 206
++ D+ + +N +I G + + DA ++F M VK +Y + Y ++G
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 207 KMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWV 258
AL FEKM K N+V+ N + +G A+Q+F + + P++V++
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 259 TMLCGFARHGKITEARRLFDSM---PCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKMPH- 313
M+ +++ G+I EA +L M C+ +V+ N++I + ++DEA K+F++M
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 314 ---KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEA 366
V++ T++ G + GK+ EA E++ M K T L L + V A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 367 SKMFNQL----STRDTICWNSMIAGFCQSGRMDEALDLFRQMPK---KNSVSWNTMISGY 419
KM ++ D +N++I G ++G++ EA+ F QM K + V+ T++ G
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGV 687
Query: 420 AQAGQMDSAENI-----FQAMEERNIVSWNSLITGFLQNSLYFDAL---KSLVLMG--RE 469
+A ++ A I + ++ + W LI L + +A+ + LV G R+
Sbjct: 688 VKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD 747
Query: 470 GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS-GYINDLFVSNALIAMYAKCGRVES 528
G S L E K G L N LI + +E
Sbjct: 748 G----DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 803
Query: 529 AEQVFTAIE---CV-DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLS 584
A+ VF ++ C+ D+ ++N L+ Y +G E F+ +K+M + E + +T ++S
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 585 ACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM---DVK 641
AG + LDL+ ++ D P A Y L+D L + GRL EA + GM +
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 642 ANAGLWGSLL 651
N ++ L+
Sbjct: 924 PNCAIYNILI 933
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 140/601 (23%), Positives = 276/601 (45%), Gaps = 79/601 (13%)
Query: 48 KLGKVEEAVRVFS----NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----V 99
K+G+++EA+++ S N +++ NS+I+ K ++ +A ++F +M + L V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELL--- 152
++NT++AG N ++EA +LF+ M ++ + ++ + C + ++ A ++L
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 153 ---ELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMP---VKDLVSYNSMLAGYTQNG 206
VPD +N +I G K GQ +A F+ M D V+ ++L G +
Sbjct: 635 MDMGCVPDVFT---YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAS 691
Query: 207 KM----GLALHFFEKMAEKNV-VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVS----- 256
+ + +F A++ + W ++ + + +A E++ N +
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV-ANGICRDGDS 750
Query: 257 -WVTMLCGFARHGKITEARRLFDSMPC-----KNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
V ++ +H ++ AR LF+ + ++N +I + I+ A +F++
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 311 MPH----KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA----LMSGLIQTGR 362
+ D ++ +++ Y + GK+DE E+Y +M + A T ++SGL++ G
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 363 VDEASKMFNQL-STRD---TIC-WNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWN 413
VD+A ++ L S RD T C + +I G +SGR+ EA LF M + N +N
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 414 TMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLI-----TGFLQNSL-YFDALKSL 463
+I+G+ +AG+ D+A +F+ M + ++ +++ L+ G + L YF LK
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK-- 988
Query: 464 VLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL-HEYILKSGYINDLFVSNALIAMYAK 522
G PD + + L +E G DL+ N+LI
Sbjct: 989 ----ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 523 CGRVESAEQVFTAIECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVT 578
G VE A +++ I+ L ++N+LI GY+L+G A+ ++ M++ P+ T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 579 F 579
+
Sbjct: 1105 Y 1105
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 156/709 (22%), Positives = 304/709 (42%), Gaps = 133/709 (18%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ 95
N I L ++ ++++A+ +F N + TY I + K+G A + F+KM
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 96 R----NLVSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFSWALMITCYTRKGKLEK 147
+ N+V+ N + EA ++F D+ D+ ++ +M+ CY++ G++++
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 148 ARELL-ELVPD--KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
A +LL E++ + + D N++I K + +A K+F M L V+YN++LA
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 201 GYTQNGKMGLALHFFEKMAEK--------------------------------------- 221
G +NGK+ A+ FE M +K
Sbjct: 582 GLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVP 641
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLF---EKIPNPNAVSWVTMLCGFARHGKITEARR--- 275
+V ++N ++ G V +G + A F +K+ P+ V+ T+L G + I +A +
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIIT 701
Query: 276 --LFDSMPCKNVVSWNAMIAAYAQDLQIDEAV----KLFIKMPHKDGVS-WTTIINGYIR 328
L++ + W +I + + ID AV +L +DG S II +
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCK 761
Query: 329 VGKLDEAREVYNQMPCKDIAAETAL------MSGLIQTGRVDEASKMFNQLSTR----DT 378
+ AR ++ + KD+ + L + GL++ ++ A +F Q+ + D
Sbjct: 762 HNNVSGARTLFEKFT-KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 379 ICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIF-Q 433
+N ++ + +SG++DE +L+++M + N+++ N +ISG +AG +D A +++
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 434 AMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
M +R+ ++ LI G ++ ++A
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEA------------------------------ 910
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI--ECV--DLISWN 545
QL E +L G + + N LI + K G ++A +F + E V DL +++
Sbjct: 911 -----KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
L+ + G E FK++ + PD V + +++ + + L LF M
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 606 FAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAGLWGSLL 651
I P Y+ L+ LG G +EEA +N ++ ++ N + +L+
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/571 (22%), Positives = 248/571 (43%), Gaps = 96/571 (16%)
Query: 17 IKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNS 72
++M MK K T V N + LGK GK++EA+ +F + K N +T+N+
Sbjct: 562 MRMKEMKLKPT--------VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 73 MISVFAKNGKISDARQLFDKMSQRNLV----SWNTMIAGYLHNSMVEEASKLFDVMPERD 128
+ KN +++ A ++ KM V ++NT+I G + N V+EA F
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF------- 666
Query: 129 NFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKV----- 183
++ +LV T C ++ G K DA K+
Sbjct: 667 --------------------HQMKKLVYPDFVTLC--TLLPGVVKASLIEDAYKIITNFL 704
Query: 184 FNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV--SWNLMVSGFVNS---GD 238
+N + + ++ + A+ F E++ + +++V S +
Sbjct: 705 YNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNN 764
Query: 239 LSSARQLFEKIP-----NPNAVSWVTMLCGFARHGKITEARRLF---DSMPC-KNVVSWN 289
+S AR LFEK P ++ ++ G I A+ +F S C +V ++N
Sbjct: 765 VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 290 AMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREV-YNQMPC 344
++ AY + +IDE +L+ +M + ++ +I+G ++ G +D+A ++ Y+ M
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 345 KDIAAETA----LMSGLIQTGRVDEASKMFNQL----STRDTICWNSMIAGFCQSGRMDE 396
+D + L+ GL ++GR+ EA ++F + + +N +I GF ++G D
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 397 ALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLIT 448
A LF++M K+ + +++ ++ G++D + F+ ++E ++V +N +I
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 449 GF-----LQNSL-YFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
G L+ +L F+ +K+ G PD T+ + +++ I
Sbjct: 1005 GLGKSHRLEEALVLFNEMKT-----SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
++G ++F NALI Y+ G+ E A V+
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 157/759 (20%), Positives = 316/759 (41%), Gaps = 78/759 (10%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLF 121
N +YN +I + K+ ++A +++ +M + +L ++++++ G ++ L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 122 DVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKK 174
M + + +++ + I R GK+ +A E+L+ + D+ D + +I
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 175 GQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSW 226
+ A++VF M D V+Y ++L ++ N + F+ +M + +VV++
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
++V +G+ A + + + PN ++ T++CG R ++ +A LF +M
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 283 KNV----VSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDE 334
V ++ I Y + A++ F KM K + V+ + + G+ E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 335 AREVYNQMPCKDIA------AETALMSGLIQTGRVDEASKMFNQL----STRDTICWNSM 384
A++++ + KDI +M + G +DEA K+ +++ D I NS+
Sbjct: 487 AKQIFYGL--KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 385 IAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEER-- 438
I ++ R+DEA +F +M K V++NT+++G + G++ A +F+ M ++
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 439 --NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQ 496
N +++N+L +N ALK L M G PD T+ +
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664
Query: 497 LHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI--ECVDL---ISWNSLISGY 551
+ K Y D L+ K +E A ++ T C D + W LI G
Sbjct: 665 FFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI-GS 722
Query: 552 ALNGYAIEAFKAFKQMLSEEVV---PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAI 608
L I+ +F + L + D + + +C H ++ LF+ +D +
Sbjct: 723 ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSG-ARTLFEKFTKDLGV 781
Query: 609 EPLAEHYSCLVDLLGRMGRLEEAFNV---VRGMDVKANAGLWGSLLGACRVHKNLEIGE- 664
+P Y+ L+ L +E A +V V+ + + LL A K+ +I E
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA--YGKSGKIDEL 839
Query: 665 ---FAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQ 721
+ M E E + ++ I +S + +AG ++ L + R C++ +
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGL-VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 722 NQIQCFLSDDSGRLRPETIQIILNAISAHMRDKFNVFNM 760
+ + SGRL E Q+ + R ++N+
Sbjct: 899 DGLS-----KSGRLY-EAKQLFEGMLDYGCRPNCAIYNI 931
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 144/578 (24%), Positives = 264/578 (45%), Gaps = 82/578 (14%)
Query: 51 KVEEAVRVFSNTIH----KNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
++E A R+ S + N+VT+ ++I+ F K G++ A LF M QR +L++++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 103 TMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTA 162
T+I GY M+ KLF S AL KG KLD
Sbjct: 326 TLIDGYFKAGMLGMGHKLF---------SQAL------HKGV-------------KLDVV 357
Query: 163 CWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKM----GLALHF 214
+++ I Y K G + A V+ M + ++V+Y ++ G Q+G++ G+
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 215 FEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKI 270
++ E ++V+++ ++ GF G+L S L+E + P+ V + ++ G ++ G +
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 271 TEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTI 322
A R M + NVV +N++I + + + DEA+K+F M D ++TT+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 323 INGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRVDEASKMF-----N 371
+ I G+L+EA ++ +M P D A L+ + + ++F N
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEP--DALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 372 QLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDS 427
++S +C N +I + R+++A F + + + V++NTMI GY ++D
Sbjct: 596 KISADIAVC-NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 654
Query: 428 AENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXX 483
AE IF+ ++ N V+ LI +N+ A++ +M +G KP+ T+
Sbjct: 655 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Query: 484 XXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-TAIEC---V 539
+ +L E + + G + + +I K GRV+ A +F AI+
Sbjct: 715 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 774
Query: 540 DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
D++++ LI GY G +EA ++ ML V PD +
Sbjct: 775 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 143/645 (22%), Positives = 279/645 (43%), Gaps = 116/645 (17%)
Query: 48 KLGKVEEAVRVFSNTIHKNLV----TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNT 103
+ G V++A+ +F + +V + M++ + ++ FDK+ + +
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGV 217
Query: 104 MIAGYLHNSMV--EEASKLFD---VMPERDNFSWALMITCYTRKG----KLEKARELLEL 154
G++ +++ E +K D ++ ER F ++ KG ++E A LL L
Sbjct: 218 SAHGFVLDALFCKGEVTKALDFHRLVMER-GFRVGIVSCNKVLKGLSVDQIEVASRLLSL 276
Query: 155 VPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGK 207
V D + + +I G+ K+G+ A +F +M + DL++Y++++ GY + G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 208 MGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLC- 262
+G+ F + K +VV ++ + +V SGDL++A ++++ MLC
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR-----------MLCQ 385
Query: 263 GFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVS 318
G + NVV++ +I QD +I EA ++ ++ + V+
Sbjct: 386 GIS-----------------PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 319 WTTIINGYIRVGKLDEAREVYNQM-----PCKDIAAETALMSGLIQTGRVDEA----SKM 369
++++I+G+ + G L +Y M P D+ L+ GL + G + A KM
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYP-PDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 370 FNQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQM 425
Q + + +NS+I G+C+ R DEAL +FR M K + ++ T++ G++
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547
Query: 426 DSAENIFQAM----EERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXX 481
+ A +F M E + +++ +LI F ++ KP
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKH-----------------MKP-------- 582
Query: 482 XXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-TAIEC-- 538
+G QL + + ++ D+ V N +I + KC R+E A + F IE
Sbjct: 583 ----------TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 539 -VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLD 597
D++++N++I GY EA + F+ + P+ VT ++ + +
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 598 LFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+F M E + +P A Y CL+D + +E +F + M K
Sbjct: 693 MFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 50/305 (16%)
Query: 405 PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQNSLYFDAL 460
P N V++ T+I+G+ + G+MD A ++F+ ME+R I +++++LI G YF A
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG------YFKA- 334
Query: 461 KSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMY 520
G G +G++L L G D+ V ++ I +Y
Sbjct: 335 ------GMLG----------------------MGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 521 AKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQ 576
K G + +A V+ + C +++++ LI G +G EAF + Q+L + P
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 577 VTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA--FNV 634
VT+ ++ G G L++ M++ P Y LVD L + G + A F+V
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 635 -VRGMDVKANAGLWGSLL-GACRVHKNLE-IGEFAAMRLSELEPHNASNYITLSNMHAEA 691
+ G ++ N ++ SL+ G CR+++ E + F M + ++P + + + T+ +
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP-DVATFTTVMRVSIME 544
Query: 692 GRWEE 696
GR EE
Sbjct: 545 GRLEE 549
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 214/440 (48%), Gaps = 47/440 (10%)
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEE 116
N I N+ T N MI+ F + K A + K+ + + ++NT+I G V E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 117 ASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIA 169
A L D M E D ++ ++ R G A +LL + + K D ++ +I
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 170 GYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK---- 221
+ G A +F M K +V+YNS++ G + GK + M +
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 222 NVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLF 277
NV+++N+++ FV G L A +L++++ +PN +++ T++ G+ +++EA +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 278 DSM---PCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRV 329
D M C ++V++ ++I Y ++D+ +K+F + + + V+++ ++ G+ +
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 330 GKLDEAREVYNQMPC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTRD----TICW 381
GK+ A E++ +M D+ L+ GL G++++A ++F L + +
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 382 NSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
++I G C+ G++++A +LF +P K N +++ MISG + G + A + + MEE
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 438 R----NIVSWNSLITGFLQN 453
N ++N+LI L++
Sbjct: 537 DGNAPNDCTYNTLIRAHLRD 556
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 194/388 (50%), Gaps = 39/388 (10%)
Query: 130 FSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNL 186
++ +MI C+ R K A +L V + DT +N +I G +G+ S+A + +
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 187 M----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKN----VVSWNLMVSGFVNSGD 238
M D+V+YNS++ G ++G LAL KM E+N V +++ ++ G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 239 LSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNA 290
+ +A LF+++ + V++ +++ G + GK + L M + NV+++N
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 291 MIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQM---P 343
++ + ++ ++ EA +L+ +M + + +++ T+++GY +L EA + + M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 344 CK-DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEAL 398
C DI T+L+ G RVD+ K+F +S R + + ++ ++ GFCQSG++ A
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 399 DLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEERN----IVSWNSLITGF 450
+LF++M + +++ ++ G G+++ A IF+ +++ IV + ++I G
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 451 LQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ DA + +G KP+ T+
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 205/426 (48%), Gaps = 66/426 (15%)
Query: 50 GKVEEAV----RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMI 105
GKV EAV R+ N ++VTYNS+++ ++G S A L KM +RN+
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV------- 224
Query: 106 AGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKAREL---LELVPDKLDTA 162
+ D F+++ +I R G ++ A L +E K
Sbjct: 225 --------------------KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 163 CWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
+N+++ G K G+++D + M V +++++N +L + + GK+ A +++M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 219 AEK----NVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLCGFARHGKI 270
+ N++++N ++ G+ LS A + + + +P+ V++ +++ G+ ++
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 271 TEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTI 322
+ ++F ++ + N V+++ ++ + Q +I A +LF +M D +++ +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 323 INGYIRVGKLDEAREVYNQMPCKD----IAAETALMSGLIQTGRVDEASKMFNQLSTR-- 376
++G GKL++A E++ + I T ++ G+ + G+V++A +F L +
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 377 --DTICWNSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAEN 430
+ + + MI+G C+ G + EA L R+M + N ++NT+I + + G + ++
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 431 IFQAME 436
+ + M+
Sbjct: 565 LIEEMK 570
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 166/346 (47%), Gaps = 58/346 (16%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFD 91
V N + L K GK + + + + + N++T+N ++ VF K GK+ +A +L+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 92 KMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEK 147
+M R N++++NT++ GY + + EA+ + D+M R+ S
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV-RNKCSP--------------- 366
Query: 148 ARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYT 203
D + ++I GY + D KVF + + L V+Y+ ++ G+
Sbjct: 367 ------------DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 204 QNGKMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPN----AV 255
Q+GK+ LA F++M +V+++ +++ G ++G L A ++FE + V
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
+ T++ G + GK+ +A LF S+PCK NV+++ MI+ + + EA L KM
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 312 PHKDG-----VSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETA 352
+DG ++ T+I ++R G L + ++ +M +A+ +
Sbjct: 535 -EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 192/462 (41%), Gaps = 76/462 (16%)
Query: 240 SSARQLFEKIPNPNAVSWVTMLCGFA---RHGKITEARRLFDSMPCKNVVSWNAMIAAYA 296
SS + F I N N + G + I + + S P ++V ++ +A A
Sbjct: 40 SSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIA 99
Query: 297 QDLQIDEAVKLFIKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQM------PCK 345
+ Q + + F K +G+ + +IN + R K A V ++ P
Sbjct: 100 RTKQFNLVLD-FCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP-- 156
Query: 346 DIAAETALMSGLIQTGRVDEASKMFNQL----STRDTICWNSMIAGFCQSGRMDEALDLF 401
D L+ GL G+V EA + +++ D + +NS++ G C+SG ALDL
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 402 RQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQN 453
R+M ++N +++T+I + G +D+A ++F+ ME + I V++NSL+ G +
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
+ D L M P+ TF
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITF----------------------------------- 301
Query: 514 NALIAMYAKCGRVESAEQVF----TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS 569
N L+ ++ K G+++ A +++ T ++I++N+L+ GY + EA M+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 570 EEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRL- 628
+ PD VTF ++ + G+ +F+ + + A YS LV + G++
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR-NISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 629 --EEAFNVVRGMDVKANAGLWGSLL-GAC---RVHKNLEIGE 664
EE F + V + +G LL G C ++ K LEI E
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 227/462 (49%), Gaps = 51/462 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLF 121
N+ +YN +I + G+I +A L M + +++S++T++ GY +++ KL
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 122 DVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPDKL--DTACWNAVIAGYAKK 174
+VM + +++ + +I R KL +A E E++ + DT + +I G+ K+
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 175 GQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSW 226
G A K F M +D+ ++Y ++++G+ Q G M A F +M E + V++
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 227 NLMVSGFVNSGDLSSA----RQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-- 280
+++G+ +G + A + + +PN V++ T++ G + G + A L M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 281 ----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKL 332
P N+ ++N+++ + I+EAVKL + + D V++TT+++ Y + G++
Sbjct: 485 IGLQP--NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 333 DEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSM 384
D+A+E+ +M K I LM+G G +++ K+ N + + + +NS+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 385 IAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER-- 438
+ +C + A +++ M + + ++ ++ G+ +A M A +FQ M+ +
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 439 --NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
++ +++ LI GFL+ + +A + M REG D+ F
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/556 (22%), Positives = 249/556 (44%), Gaps = 73/556 (13%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLV----SWNTMIAGYLHNSMVEEASKL--FD 122
++ V G + +AR++F+KM LV S N + L + A+ + F
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLT-RLSKDCYKTATAIIVFR 235
Query: 123 VMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKG 175
PE + S+ ++I + G++++A LL L+ K D ++ V+ GY + G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 176 QFSDAEKVFNLMPVKDLVS----YNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWN 227
+ K+ +M K L Y S++ + K+ A F +M + + V +
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 228 LMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
++ GF GD+ +A + F ++ + P+ +++ ++ GF + G + EA +LF M CK
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM- 342
+ D V++T +INGY + G + +A V+N M
Sbjct: 416 GL---------------------------EPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 343 --PC-KDIAAETALMSGLIQTGRVDEASKMFNQL----STRDTICWNSMIAGFCQSGRMD 395
C ++ T L+ GL + G +D A+++ +++ + +NS++ G C+SG ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 396 EALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLI 447
EA+ L + ++V++ T++ Y ++G+MD A+ I + M + IV++N L+
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 448 TGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI 507
GF + + D K L M +G P+ +TF + +++ + G
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 508 NDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKA 563
D L+ + K ++ A +F ++ V + +++ LI G+ +EA +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 564 FKQMLSEEVVPDQVTF 579
F QM E + D+ F
Sbjct: 689 FDQMRREGLAADKEIF 704
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 209/472 (44%), Gaps = 43/472 (9%)
Query: 190 KDLVSYNSMLAGYTQNGKMGLA---LHFFEKMAE------KNVVSWNLMVSGFVNSGDLS 240
KDL S+++ + + K+ + + FF+ + + +++ V+ G L
Sbjct: 133 KDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLR 192
Query: 241 SARQLFEKIPNPNAVSWV----TMLCGFARHG-KITEARRLFDSMP----CKNVVSWNAM 291
AR++FEK+ N V V L ++ K A +F P C NV S+N +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 292 IAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
I Q +I EA L + M K D +S++T++NGY R G+LD+ ++ M K +
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 348 AAETALMSGLI-------QTGRVDEA-SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD 399
+ + +I + +EA S+M Q DT+ + ++I GFC+ G + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 400 LFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLITGFL 451
F +M ++ +++ +ISG+ Q G M A +F M E + V++ LI G+
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
+ DA + M + G P+ T+ N+L + K G ++F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAFKAFKQM 567
N+++ K G +E A ++ E D +++ +L+ Y +G +A + K+M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 568 LSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
L + + P VTF +++ G+ G L M+ I P A ++ LV
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLV 603
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 231/518 (44%), Gaps = 47/518 (9%)
Query: 175 GQFSDAEKVFNLMPVKDLV----SYNSMLAGYTQNG-KMGLALHFFEKMAEK----NVVS 225
G +A +VF M LV S N L +++ K A+ F + E NV S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 226 WNLMVSGFVNSGDLSSARQLFE----KIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+N+++ G + A L K P+ +S+ T++ G+ R G++ + +L + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLD 333
K N + ++I + ++ EA + F +M + D V +TT+I+G+ + G +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 334 EAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A + + +M +DI + TA++SG Q G + EA K+F+++ + D++ + +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 386 AGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAM----EE 437
G+C++G M +A + M + N V++ T+I G + G +DSA + M +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
NI ++NS++ G ++ +A+K + G D T+ ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL----ISWNSLISGYAL 553
+ +L G + N L+ + G +E E++ + + ++NSL+ Y +
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV-EDFAIEPLA 612
A +K M S V PD T+ ++ A + LF+ M + F++
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS--V 666
Query: 613 EHYSCLVD-LLGRMGRLE--EAFNVVRGMDVKANAGLW 647
YS L+ L R LE E F+ +R + A+ ++
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 170/394 (43%), Gaps = 51/394 (12%)
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIA 386
+ G L EAR V+ +M L GL+ + VD + +LS C+ + A
Sbjct: 186 VDFGLLREARRVFEKM----------LNYGLVLS--VDSCNVYLTRLSKD---CYKTATA 230
Query: 387 GFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER---- 438
+ +FR+ P+ N S+N +I Q G++ A ++ ME +
Sbjct: 231 -----------IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 439 NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
+++S+++++ G+ + K + +M R+G KP+ + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALN 554
+++ G + D V LI + K G + +A + F + D++++ ++ISG+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 555 GYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEH 614
G +EA K F +M + + PD VTF +++ AG + M++ P
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVT 458
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLLGACRVHKNLE-----IGEFA 666
Y+ L+D L + G L+ A ++ M ++ N + S++ N+E +GEF
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
A L+ + Y TL + + ++G ++ + +
Sbjct: 519 AAGLNA----DTVTYTTLMDAYCKSGEMDKAQEI 548
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 165/346 (47%), Gaps = 43/346 (12%)
Query: 48 KLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----V 99
K G + A + F S I +++TY ++IS F + G + +A +LF +M + L V
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLE-- 153
++ +I GY +++A ++ + M + + ++ +I ++G L+ A ELL
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 154 ----LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQN 205
L P+ +N+++ G K G +A K+ D V+Y +++ Y ++
Sbjct: 483 WKIGLQPNIFT---YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 206 GKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFE----KIPNPNAVSW 257
G+M A ++M K +V++N++++GF G L +L K PNA ++
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMPH 313
+++ + + A ++ M + V ++ ++ + + + EA LF +M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 314 KDGVS-----WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
K G S ++ +I G+++ K EAREV++QM + +AA+ +
Sbjct: 660 K-GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 227/462 (49%), Gaps = 51/462 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLF 121
N+ +YN +I + G+I +A L M + +++S++T++ GY +++ KL
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 122 DVMPER----DNFSWALMITCYTRKGKLEKARELL-ELVPDKL--DTACWNAVIAGYAKK 174
+VM + +++ + +I R KL +A E E++ + DT + +I G+ K+
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 175 GQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSW 226
G A K F M +D+ ++Y ++++G+ Q G M A F +M E + V++
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 227 NLMVSGFVNSGDLSSA----RQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM-- 280
+++G+ +G + A + + +PN V++ T++ G + G + A L M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 281 ----PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKL 332
P N+ ++N+++ + I+EAVKL + + D V++TT+++ Y + G++
Sbjct: 485 IGLQP--NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 333 DEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSM 384
D+A+E+ +M K I LM+G G +++ K+ N + + + +NS+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 385 IAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER-- 438
+ +C + A +++ M + + ++ ++ G+ +A M A +FQ M+ +
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 439 --NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
++ +++ LI GFL+ + +A + M REG D+ F
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/556 (22%), Positives = 249/556 (44%), Gaps = 73/556 (13%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLV----SWNTMIAGYLHNSMVEEASKL--FD 122
++ V G + +AR++F+KM LV S N + L + A+ + F
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLT-RLSKDCYKTATAIIVFR 235
Query: 123 VMPER----DNFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKG 175
PE + S+ ++I + G++++A LL L+ K D ++ V+ GY + G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 176 QFSDAEKVFNLMPVKDLVS----YNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWN 227
+ K+ +M K L Y S++ + K+ A F +M + + V +
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 228 LMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK 283
++ GF GD+ +A + F ++ + P+ +++ ++ GF + G + EA +LF M CK
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM- 342
+ D V++T +INGY + G + +A V+N M
Sbjct: 416 GL---------------------------EPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 343 --PC-KDIAAETALMSGLIQTGRVDEASKMFNQL----STRDTICWNSMIAGFCQSGRMD 395
C ++ T L+ GL + G +D A+++ +++ + +NS++ G C+SG ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 396 EALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLI 447
EA+ L + ++V++ T++ Y ++G+MD A+ I + M + IV++N L+
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 448 TGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYI 507
GF + + D K L M +G P+ +TF + +++ + G
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 508 NDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKA 563
D L+ + K ++ A +F ++ V + +++ LI G+ +EA +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 564 FKQMLSEEVVPDQVTF 579
F QM E + D+ F
Sbjct: 689 FDQMRREGLAADKEIF 704
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 209/472 (44%), Gaps = 43/472 (9%)
Query: 190 KDLVSYNSMLAGYTQNGKMGLA---LHFFEKMAE------KNVVSWNLMVSGFVNSGDLS 240
KDL S+++ + + K+ + + FF+ + + +++ V+ G L
Sbjct: 133 KDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLR 192
Query: 241 SARQLFEKIPNPNAVSWV----TMLCGFARHG-KITEARRLFDSMP----CKNVVSWNAM 291
AR++FEK+ N V V L ++ K A +F P C NV S+N +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 292 IAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDI 347
I Q +I EA L + M K D +S++T++NGY R G+LD+ ++ M K +
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 348 AAETALMSGLI-------QTGRVDEA-SKMFNQLSTRDTICWNSMIAGFCQSGRMDEALD 399
+ + +I + +EA S+M Q DT+ + ++I GFC+ G + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 400 LFRQMPKKN----SVSWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLITGFL 451
F +M ++ +++ +ISG+ Q G M A +F M E + V++ LI G+
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 452 QNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLF 511
+ DA + M + G P+ T+ N+L + K G ++F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 512 VSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAFKAFKQM 567
N+++ K G +E A ++ E D +++ +L+ Y +G +A + K+M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 568 LSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
L + + P VTF +++ G+ G L M+ I P A ++ LV
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLV 603
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 231/518 (44%), Gaps = 47/518 (9%)
Query: 175 GQFSDAEKVFNLMPVKDLV----SYNSMLAGYTQNG-KMGLALHFFEKMAEK----NVVS 225
G +A +VF M LV S N L +++ K A+ F + E NV S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 226 WNLMVSGFVNSGDLSSARQLFE----KIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP 281
+N+++ G + A L K P+ +S+ T++ G+ R G++ + +L + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 282 CK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLD 333
K N + ++I + ++ EA + F +M + D V +TT+I+G+ + G +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 334 EAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
A + + +M +DI + TA++SG Q G + EA K+F+++ + D++ + +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 386 AGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAM----EE 437
G+C++G M +A + M + N V++ T+I G + G +DSA + M +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
NI ++NS++ G ++ +A+K + G D T+ ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL----ISWNSLISGYAL 553
+ +L G + N L+ + G +E E++ + + ++NSL+ Y +
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMV-EDFAIEPLA 612
A +K M S V PD T+ ++ A + LF+ M + F++
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS--V 666
Query: 613 EHYSCLVD-LLGRMGRLE--EAFNVVRGMDVKANAGLW 647
YS L+ L R LE E F+ +R + A+ ++
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 170/394 (43%), Gaps = 51/394 (12%)
Query: 327 IRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIA 386
+ G L EAR V+ +M L GL+ + VD + +LS C+ + A
Sbjct: 186 VDFGLLREARRVFEKM----------LNYGLVLS--VDSCNVYLTRLSKD---CYKTATA 230
Query: 387 GFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER---- 438
+ +FR+ P+ N S+N +I Q G++ A ++ ME +
Sbjct: 231 -----------IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 439 NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLH 498
+++S+++++ G+ + K + +M R+G KP+ + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 499 EYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALN 554
+++ G + D V LI + K G + +A + F + D++++ ++ISG+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 555 GYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEH 614
G +EA K F +M + + PD VTF +++ AG + M++ P
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVT 458
Query: 615 YSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLLGACRVHKNLE-----IGEFA 666
Y+ L+D L + G L+ A ++ M ++ N + S++ N+E +GEF
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERL 700
A L+ + Y TL + + ++G ++ + +
Sbjct: 519 AAGLNA----DTVTYTTLMDAYCKSGEMDKAQEI 548
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 165/346 (47%), Gaps = 43/346 (12%)
Query: 48 KLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----V 99
K G + A + F S I +++TY ++IS F + G + +A +LF +M + L V
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLE-- 153
++ +I GY +++A ++ + M + + ++ +I ++G L+ A ELL
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 154 ----LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQN 205
L P+ +N+++ G K G +A K+ D V+Y +++ Y ++
Sbjct: 483 WKIGLQPNIFT---YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 206 GKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFE----KIPNPNAVSW 257
G+M A ++M K +V++N++++GF G L +L K PNA ++
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 258 VTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMPH 313
+++ + + A ++ M + V ++ ++ + + + EA LF +M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 314 KDGVS-----WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
K G S ++ +I G+++ K EAREV++QM + +AA+ +
Sbjct: 660 K-GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 146/636 (22%), Positives = 282/636 (44%), Gaps = 102/636 (16%)
Query: 32 GGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFD 91
G +H F+ Q +I GKLG E TI + L+ VF ++ IS R +D
Sbjct: 106 GYRHSFDVYQVLI--GKLGANGEF-----KTIDRLLIQMKDEGIVFKESLFISIMRD-YD 157
Query: 92 K-----------MSQRNLVSWNTMIAGYLHNSMVE----------EASKLFDVMPERDN- 129
K + RN+ S Y N ++E A+ +D++ +
Sbjct: 158 KAGFPGQTTRLMLEMRNVYSCEPTFKSY--NVVLEILVSGNCHKVAANVFYDMLSRKIPP 215
Query: 130 --FSWALMITCYTRKGKLEKARELLE------LVPDKLDTACWNAVIAGYAKKGQFSDA- 180
F++ +++ + +++ A LL VP+ + + +I +K + ++A
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN---SVIYQTLIHSLSKCNRVNEAL 272
Query: 181 ---EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGF 233
E++F + V D ++N ++ G + ++ A +M + +++ +++G
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 234 VNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIA 293
G + +A+ LF +IP P V + T++ GF HG++ +A+ + M V S+ +
Sbjct: 333 CKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDM----VTSYGIV-- 386
Query: 294 AYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMP---CK-DIAA 349
D ++ ++I GY + G + A EV + M CK ++ +
Sbjct: 387 --------------------PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 350 ETALMSGLIQTGRVDEASKMFNQLST----RDTICWNSMIAGFCQSGRMDEALDLFRQMP 405
T L+ G + G++DEA + N++S +T+ +N +I+ FC+ R+ EA+++FR+MP
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 406 KK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYF 457
+K + ++N++ISG + ++ A + + M N V++N+LI FL+
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
+A K + M +G D+ T+ L E +L+ G+ N LI
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 518 AMYAKCGRVESA----EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVV 573
+ G VE A +++ D++++NSLI+G G + F+++ +E +
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 574 PDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIE 609
PD VTF ++S G C++ D IE
Sbjct: 667 PDTVTFNTLMSWLCKGGFVYDA-----CLLLDEGIE 697
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 222/507 (43%), Gaps = 71/507 (14%)
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKI 249
SYN +L +A + F M + + ++ +++ F ++ SA L +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 250 PN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQI 301
PN+V + T++ ++ ++ EA +L + M V ++N +I + +I
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 302 DEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL 357
+EA K+ +M + D +++ ++NG ++G++D A++++ ++P +I L+ G
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGF 363
Query: 358 IQTGRVDEASKMFNQLSTR-----DTICWNSMIAGFCQSGRMDEALDLFRQMP----KKN 408
+ GR+D+A + + + T D +NS+I G+ + G + AL++ M K N
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLV 464
S+ ++ G+ + G++D A N+ M + N V +N LI+ F + +A++
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
M R+G KPD TF + L ++ G + + N LI + + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 525 RVESA-----EQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLS---------- 569
++ A E VF +D I++NSLI G G +A F++ML
Sbjct: 544 EIKEARKLVNEMVFQG-SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 570 -------------EEVV------------PDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
EE V PD VTF +++ AG GL +F+ +
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 605 DFAIEPLAEHYSCLVDLLGRMGRLEEA 631
+ I P ++ L+ L + G + +A
Sbjct: 663 E-GIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 200/439 (45%), Gaps = 28/439 (6%)
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVY 339
+ ++ ++ A+ +ID A+ L M + V + T+I+ + +++EA ++
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 340 NQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQS 391
+M D ++ GL + R++EA+KM N++ R D I + ++ G C+
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 392 GRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER-----NIVSWNSL 446
GR+D A DLF ++PK V +NT+I G+ G++D A+ + M ++ ++NSL
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 447 ITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGY 506
I G+ + L AL+ L M +G KP+ ++ + + G
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 507 INDLFVSNALIAMYAKCGRVESAEQVFTAIE---C-VDLISWNSLISGYALNGYAIEAFK 562
+ N LI+ + K R+ A ++F + C D+ ++NSLISG A
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE-HYSCLVDL 621
+ M+SE VV + VT+ +++A G + L MV F PL E Y+ L+
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV--FQGSPLDEITYNSLIKG 573
Query: 622 LGRMGRLEEAFNVVRGM--DVKANAGLWGSLL--GACRVHKNLEIGEFAAMRLSELEPHN 677
L R G +++A ++ M D A + + ++L G CR E EF + +
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 678 ASNYITLSNMHAEAGRWEE 696
+ +L N AGR E+
Sbjct: 634 IVTFNSLINGLCRAGRIED 652
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 224/469 (47%), Gaps = 47/469 (10%)
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKM- 218
+N+V++ K GQ AE + + MP D++SYNS++ G+ +NG + A E +
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 219 ------AEKNVVSWNLMVSGFVNSGDLSSA---RQLFEKIPNPNAVSWVTMLCGFARHGK 269
+ ++VS+N + +GF L + K +PN V++ T + F + G+
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGE 178
Query: 270 ITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTT 321
+ A + F SM NVV++ +I Y + ++ AV L+ +M + V++T
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238
Query: 322 IINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEA----SKMFNQL 373
+I+G+ + G++ A E+Y++M + T ++ G Q G D A +KM NQ
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
Query: 374 STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS----WNTMISGYAQAGQMDSAE 429
D + +I+G C +G++ EA ++ M K + V + TM++ Y ++G+M +A
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 430 NIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
N++ + ER ++V+ +++I G +N +A+ + +K + +
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI-----EKANDVMYTVLIDAL 413
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDL 541
+L I ++G + D F+ + IA K G + A ++ T + +DL
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDL 473
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
+++ +LI G A G +EA + F +ML+ + PD F ++ A G
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 218/471 (46%), Gaps = 56/471 (11%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLF 90
H + N + + KLG+V+ A + + ++++YNS+I +NG I A +
Sbjct: 55 HRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVL 114
Query: 91 DKM-------SQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPE---RDNFSWALMITCYT 140
+ + + ++VS+N++ G+ M++E VM + + +++ I +
Sbjct: 115 ESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFC 174
Query: 141 RKGKLEKA-RELLELVPDKL--DTACWNAVIAGYAKKGQFSDAEKVFNLM-PVK---DLV 193
+ G+L+ A + + D L + + +I GY K G A ++ M V+ ++V
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 194 SYNSMLAGYTQNGKMGLALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKI 249
+Y +++ G+ + G+M A + +M E N + + ++ GF GD +A + K+
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 250 PNP----NAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQI 301
N + ++ ++ G +GK+ EA + + M ++V + M+ AY + ++
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 302 DEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGL 357
AV ++ K+ + D V+ +T+I+G + G+L EA + D+ T L+ L
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMY-TVLIDAL 413
Query: 358 IQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NS 409
+ G E ++F+++S D + S IAG C+ G + +A L +M ++ +
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDL 473
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDAL 460
+++ T+I G A G M A +F M L +G +S FD L
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEM----------LNSGISPDSAVFDLL 514
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 193/410 (47%), Gaps = 63/410 (15%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLF 121
N+VTY++ I F K+G++ A + F M + N+V++ +I GY +E A L+
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 122 DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAE 181
M R+ ++ L+ + A+I G+ KKG+ AE
Sbjct: 222 KEM----------------RRVRMS------------LNVVTYTALIDGFCKKGEMQRAE 253
Query: 182 KVFNLMPVKDLVS-----YNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSG 232
++++ M V+D V Y +++ G+ Q G A+ F KM + ++ ++ +++SG
Sbjct: 254 EMYSRM-VEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312
Query: 233 FVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK----N 284
+G L A ++ E + P+ V + TM+ + + G++ A ++ + + +
Sbjct: 313 LCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372
Query: 285 VVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC 344
VV+ + MI A++ Q+ EA+ F + + V +T +I+ + G E +++++
Sbjct: 373 VVALSTMIDGIAKNGQLHEAIVYFC-IEKANDVMYTVLIDALCKEGDFIEVERLFSKISE 431
Query: 345 KDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDE 396
+ + T+ ++GL + G + +A K+ ++ D + + ++I G G M E
Sbjct: 432 AGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVE 491
Query: 397 ALDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS 442
A +F +M +S ++ +I Y + G M +A ++ M+ R +V+
Sbjct: 492 ARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVT 541
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 165/360 (45%), Gaps = 57/360 (15%)
Query: 48 KLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKM----SQRNLV 99
K G +E AV ++ + N+VTY ++I F K G++ A +++ +M + N +
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELV 155
+ T+I G+ + A K M + D ++ ++I+ GKL++A E++E
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE-- 327
Query: 156 PDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFF 215
D EK +L+P D+V + +M+ Y ++G+M A++ +
Sbjct: 328 -----------------------DMEKS-DLVP--DMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 216 EKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKIT 271
K+ E+ +VV+ + M+ G +G L A F I N V + ++ + G
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-CIEKANDVMYTVLIDALCKEGDFI 420
Query: 272 EARRLFDSMPCKNVVS----WNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
E RLF + +V + + IA + + +A KL +M + D +++TT+I
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQT----GRVDEASKMFNQLSTRDTI 379
G G + EAR+V+++M I+ ++A+ LI+ G + AS + + R +
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 176/403 (43%), Gaps = 65/403 (16%)
Query: 287 SWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQM 342
S+N++++ + Q+ A + MP D +S+ ++I+G+ R G + A V +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 343 P------CK-DIAAETALMSGLIQTGRVDEA---SKMFNQLSTRDTICWNSMIAGFCQSG 392
CK DI + +L +G + +DE + + + + + +++ I FC+SG
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 393 RMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE----RNIVSWN 444
+ AL F M + N V++ +I GY +AG ++ A ++++ M N+V++
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 445 SLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKS 504
+LI GF + Q +++ +++
Sbjct: 238 ALIDGFCKKG-----------------------------------EMQRAEEMYSRMVED 262
Query: 505 GYINDLFVSNALIAMYAKCGRVESAEQVFTAI----ECVDLISWNSLISGYALNGYAIEA 560
+ V +I + + G ++A + + +D+ ++ +ISG NG EA
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 561 FKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVD 620
+ + M ++VPD V F M++A +G ++++ ++E EP S ++D
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER-GFEPDVVALSTMID 381
Query: 621 LLGRMGRLEEAFNVVRGMDVKANAGLWGSLLGA-CRVHKNLEI 662
+ + G+L EA +V KAN ++ L+ A C+ +E+
Sbjct: 382 GIAKNGQLHEA--IVYFCIEKANDVMYTVLIDALCKEGDFIEV 422
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/597 (23%), Positives = 254/597 (42%), Gaps = 103/597 (17%)
Query: 46 LGKLGKVEEAV----RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW 101
L K GK+EEA+ RV + NL YN++I K K +A LFD+M + L
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL--- 398
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD---K 158
++ +++++I + R+GKL+ A L + D K
Sbjct: 399 ------------------------RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 159 LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLALHF 214
L +N++I G+ K G S AE M K L V+Y S++ GY GK+ AL
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 215 FEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFAR 266
+ +M K + ++ ++SG +G + A +LF ++ PN V++ M+ G+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 267 HGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKMPHK-----DGV 317
G +++A M K +V S+ +I Q EA K+F+ HK + +
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEI 613
Query: 318 SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMF----NQL 373
+T +++G+ R GKL+EA V +M + + + LI + K+F ++
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 374 STR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQM 425
R D + + SMI ++G EA ++ M + N V++ +I+G +AG +
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 426 DSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXX 485
+ AE + M+ + V N + + ++ G
Sbjct: 734 NEAEVLCSKMQPVSSVP----------NQVTYGCFLDILTKGE----------------- 766
Query: 486 XXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI----ECVDL 541
Q +LH ILK G + + N LI + + GR+E A ++ T + D
Sbjct: 767 ---VDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 542 ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
I++ ++I+ +A + + M + + PD+V + ++ C AG + +L
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 132/623 (21%), Positives = 257/623 (41%), Gaps = 79/623 (12%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEAS 118
I ++ Y +I + +S A+++ M N+V +N +I G V EA
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 119 KLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFS 178
+ + +D L PD + ++ G K +F
Sbjct: 283 GIKKDLAGKD-------------------------LKPD---VVTYCTLVYGLCKVQEFE 314
Query: 179 ------DAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNL 228
D P + VS S++ G + GK+ AL+ +++ + N+ +N
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVS--SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 229 MVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK- 283
++ A LF+++ PN V++ ++ F R GK+ A M
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 284 ---NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD----GVSWTTIINGYIRVGKLDEAR 336
+V +N++I + + I A +M +K V++T+++ GY GK+++A
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 337 EVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMIAGF 388
+Y++M K IA T L+SGL + G + +A K+FN+++ + + +N MI G+
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 389 CQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAME----ERNI 440
C+ G M +A + ++M +K ++ S+ +I G GQ A+ + E N
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 441 VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEY 500
+ + L+ GF + +AL M + G D + ++ L +
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 501 ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI---ECV-DLISWNSLISGYALNGY 556
+ G D + ++I +K G + A ++ + CV + +++ ++I+G G+
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ-GLDLFKCMVEDFAIEPLAEHY 615
EA +M VP+QVT+ L + + Q ++L +++ Y
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLAN--TATY 790
Query: 616 SCLVDLLGRMGRLEEAFNVVRGM 638
+ L+ R GR+EEA ++ M
Sbjct: 791 NMLIRGFCRQGRIEEASELITRM 813
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 117/580 (20%), Positives = 245/580 (42%), Gaps = 85/580 (14%)
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPVK-----DLVSYNSMLAGYTQNGKMGLALHFFEKM 218
++ +I Y + + D VF +M K ++ + +++L G + GLA+ F M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 219 AEKNVVSWNLMVSGFVNS----GDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEAR 274
+ + +G + S DLS A+++ +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM------------------------- 253
Query: 275 RLFDSMPCK-NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD----GVSWTTIINGYIRV 329
++ C N+V +N +I + ++ EAV + + KD V++ T++ G +V
Sbjct: 254 ---EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 330 GKLDEAREVYNQMPCKDI----AAETALMSGLIQTGRVDEASKMFNQLS----TRDTICW 381
+ + E+ ++M C AA ++L+ GL + G+++EA + ++ + + +
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 382 NSMIAGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSAENIFQAMEE 437
N++I C+ + EA LF +M K N V+++ +I + + G++D+A + M +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 438 R----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQV 493
++ +NSLI G + A + M + +P T+
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 494 GNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLIS 549
+L+ + G ++ L++ + G + A ++F + + +++N +I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 550 GYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQ------GLDLFKCMV 603
GY G +AF+ K+M + +VPD ++ ++ G A++ GL C +
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 604 EDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVV-----RGMDVKANAGLWGSLLGACRVHK 658
+ Y+ L+ R G+LEEA +V RG+D+ + +G L+ HK
Sbjct: 611 NEIC-------YTGLLHGFCREGKLEEALSVCQEMVQRGVDL--DLVCYGVLIDGSLKHK 661
Query: 659 N--LEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEE 696
+ L G M L+P + Y ++ + ++ G ++E
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVI-YTSMIDAKSKTGDFKE 700
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 149/630 (23%), Positives = 280/630 (44%), Gaps = 96/630 (15%)
Query: 70 YNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAG---YLHNSMVEEASKLFD 122
++ +S + GK A Q+F KM + NL++ NT++ G Y + + A ++FD
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 123 VMPE----RDNFSWALMITCYTRKGKLEKARELLELVPDKL----DTACWNAVIAGYAKK 174
M + + ++ +++ Y +GKLE A +LE + + D +N ++ +KK
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 175 GQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SW 226
G+ SD +++ M V + V+YN+++ GY + G + A E M + NV+ ++
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
N++++G N+G + +L + + + P+ V++ T++ G G EAR+L + M
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 283 KNV----VSWNAMIAAYAQDLQ---IDEAVKLFIKMP--HKDGVSWTTIINGYIRVGKLD 333
V V+ N + ++ + + VK + M D V++ T+I Y++VG L
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 334 EAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGR 393
A E+ +M K I KM +TI N+++ C+ +
Sbjct: 434 GALEMMREMGQKGI--------------------KM-------NTITLNTILDALCKERK 466
Query: 394 MDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SWNS 445
+DEA +L K+ + V++ T+I G+ + +++ A ++ M++ I ++NS
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 446 LITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
LI G + A++ + G PD STF + + + +K
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVF-TAIEC--VDLISWNSLISGYALNGYAIEAFK 562
+ D + N L+ K G E A F T IE VD +++N++IS + + EA+
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYD 646
Query: 563 AFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFK-------CMVEDFAIE----PL 611
+M + + PD+ T+ +S G ++ +L K M D +E P
Sbjct: 647 LLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPA 706
Query: 612 AEH-----------YSCLVDLLGRMGRLEE 630
YS ++D L GRL+E
Sbjct: 707 TSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 228/473 (48%), Gaps = 76/473 (16%)
Query: 49 LGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTM 104
LG +E V F ++ + VTYN+++ +K G++SD ++L M + L V++N +
Sbjct: 224 LGMLERMVSEFK--VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 105 IAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW 164
+ GY ++EA ++ ++M + + ++P D +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTN-------------------------VLP---DLCTY 313
Query: 165 NAVIAGYAKKG------QFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM 218
N +I G G + DA K L P D+V+YN+++ G + G A E+M
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQP--DVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 219 ----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN-----PNAVSWVTMLCGFARHGK 269
+ N V+ N+ + + + +++ + P+ V++ T++ + + G
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 270 ITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDG-----VSWT 320
++ A + M K N ++ N ++ A ++ ++DEA L + HK G V++
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL-LNSAHKRGFIVDEVTYG 490
Query: 321 TIINGYIRVGKLDEAREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTR 376
T+I G+ R K+++A E++++M ++ +L+ GL G+ + A + F++L+
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 377 ----DTICWNSMIAGFCQSGRMDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMDSA 428
D +NS+I G+C+ GR+++A + + + K ++ + N +++G + G + A
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Query: 429 ENIFQAM-EERNI--VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
N F + EER + V++N++I+ F ++ +A L M +G +PD+ T+
Sbjct: 611 LNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 131/623 (21%), Positives = 268/623 (43%), Gaps = 102/623 (16%)
Query: 72 SMISVFAKNGKISDARQL---FDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERD 128
S++ + K +DA+ L + + S +L N+++ LH S + LFD+
Sbjct: 83 SVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLS-PPPSKALFDIA---- 137
Query: 129 NFSWALMITCYTRKGKLEKAREL------LELVPDKLDTACWNAVIAGYAKKGQFSDAEK 182
++ Y +GK A ++ L+L P+ L + Y S A +
Sbjct: 138 -------LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSARE 190
Query: 183 VFNLMPVK-----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK-----NVVSWNLMVSG 232
VF+ M VK ++ ++N ++ GY GK+ AL E+M + + V++N ++
Sbjct: 191 VFDDM-VKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249
Query: 233 FVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV-- 286
G LS ++L + PN V++ ++ G+ + G + EA ++ + M NV+
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309
Query: 287 --SWNAMIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYN 340
++N +I + E ++L M D V++ T+I+G +G EAR++
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369
Query: 341 QMPCKDIAAETAL----MSGLIQTGRVDEASKMFNQLS-----TRDTICWNSMIAGFCQS 391
QM + A + L + + + ++ +L + D + ++++I + +
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 392 GRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSW 443
G + AL++ R+M +K N+++ NT++ + ++D A N+ + +R V++
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
+LI GF + AL+ M + P STF
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF------------------------- 524
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI----SWNSLISGYALNGYAIE 559
N+LI G+ E A + F + L+ ++NS+I GY G +
Sbjct: 525 ----------NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 560 AFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
AF+ + + + PD T +L+ G+ + L+ F ++E+ ++ + Y+ ++
Sbjct: 575 AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT--YNTMI 632
Query: 620 DLLGRMGRLEEAFNVVRGMDVKA 642
+ +L+EA++++ M+ K
Sbjct: 633 SAFCKDKKLKEAYDLLSEMEEKG 655
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 47/274 (17%)
Query: 385 IAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISG---YAQAGQMDSAENIFQAMEE 437
++ + G+ AL +F++M K N ++ NT++ G Y + + SA +F M +
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 438 ----RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK-KPDQSTFXXXXXXXXXXXXXQ 492
N+ ++N L+ G+ DAL L M E K PD T+
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY-------------- 243
Query: 493 VGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLISWNSLISGYA 552
N + + + K G ++DL L+ K G V + +++N+L+ GY
Sbjct: 244 --NTILKAMSKKGRLSDL---KELLLDMKKNGLVPNR------------VTYNNLVYGYC 286
Query: 553 LNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
G EAF+ + M V+PD T+ +++ +AG +GL+L M + ++P
Sbjct: 287 KLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM-KSLKLQPDV 345
Query: 613 EHYSCLVDLLGRMGRLEEAFNVVRGMD---VKAN 643
Y+ L+D +G EA ++ M+ VKAN
Sbjct: 346 VTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN 379
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 208/451 (46%), Gaps = 82/451 (18%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLF 121
+ VT++++I+ G++S+A +L D+M + L++ N ++ G N V +A L
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 122 DVM------PERDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYA 172
D M P + L + C + G+ A ELL + + KLD ++ +I G
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMC--KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 173 KKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVV 224
K G +A +FN M +K D++ Y +++ G+ G+ M ++ +VV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 225 SWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSM 280
+++ ++ FV G L A +L +++ +P+ V++ +++ GF + ++ +A + D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 281 PCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKL 332
K N+ ++N +I Y + ID+ ++LF KM + D V++ T+I G+ +GKL
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 333 DEAREVYNQMPCK----DIAAETALMSGLIQTG--------------------------- 361
+ A+E++ +M + DI + L+ GL G
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 362 --------RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPK--- 406
+VD+A +F L + D +N MI G C+ G + EA LFR+M +
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 407 -KNSVSWNTMISGYAQAGQMDSAENIFQAME 436
N ++N +I + G + + + ++
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 230/479 (48%), Gaps = 51/479 (10%)
Query: 51 KVEEAVRVFSNTIHKN----LVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWN 102
K ++AV +F L+ ++ + SV A+ + L +M + NL + +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 103 TMIAGYLHNSMVEEA----SKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD- 157
MI + A K+ + E D +++ +I +G++ +A EL++ + +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 158 --KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGKMGLA 211
K NA++ G G+ SDA + + M V+Y +L ++G+ LA
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 212 LHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCG 263
+ KM E+ + V +++++ G G L +A LF ++ + + + T++ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 264 FARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----D 315
F G+ + +L M + +VV+++A+I + ++ ++ EA +L +M + D
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 316 GVSWTTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFN 371
V++T++I+G+ + +LD+A + + M K +I L++G + +D+ ++F
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 372 QLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAG 423
++S R DT+ +N++I GFC+ G+++ A +LF++M + + VS+ ++ G G
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 424 QMDSAENIFQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+ + A IF+ +E E +I +N +I G S DA + +G KPD T+
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 194/420 (46%), Gaps = 36/420 (8%)
Query: 220 EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARR 275
E + V+++ +++G G +S A +L +++ P ++ ++ G +GK+++A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 276 LFDSM------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIING 325
L D M P N V++ ++ + Q A++L KM + D V ++ II+G
Sbjct: 199 LIDRMVETGFQP--NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 326 YIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----D 377
+ G LD A ++N+M K DI T L+ G GR D+ +K+ + R D
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 378 TICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQ 433
+ ++++I F + G++ EA +L ++M ++ ++V++ ++I G+ + Q+D A ++
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 434 AMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXX 489
M + NI ++N LI G+ + +L D L+ M G D T+
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 490 XXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWN 545
+V +L + ++ D+ L+ G E A ++F IE +D+ +N
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 546 SLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVED 605
+I G +A+ F + + V PD T+ M+ G ++ LF+ M ED
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/463 (21%), Positives = 193/463 (41%), Gaps = 63/463 (13%)
Query: 275 RLFDSMP-CKNVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIINGYIRV 329
R+F S+ K VS+ + + D++ D+AV LF +M P + ++ + + R
Sbjct: 26 RVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVART 85
Query: 330 GKLDEAREVYNQMPCKDIAAETALMSGLIQTG-RVDEASKMFNQLST-------RDTICW 381
+ D ++ QM K IA +S +I R + S F+ + DT+ +
Sbjct: 86 KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTF 145
Query: 382 NSMIAGFCQSGRMD---EALDLFRQMPKKNS-VSWNTMISGYAQAGQMDSAENIFQAMEE 437
+++I G C GR+ E +D +M K + ++ N +++G G++ A + M E
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
TGF N + + + L +M + G+ ++ ++
Sbjct: 206 ----------TGFQPNEVTYGPV--LKVMCKSGQ---------------TALAMELLRKM 238
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYAL 553
E +K + + + L K G +++A +F +E D+I + +LI G+
Sbjct: 239 EERKIKLDAVKYSIIIDGL----CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
G + K + M+ ++ PD V F ++ G + +L K M++ I P
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTV 353
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGMDVKA---NAGLWGSLL-GACR---VHKNLEIGEFA 666
Y+ L+D + +L++A +++ M K N + L+ G C+ + LE+ F
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL--FR 411
Query: 667 AMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRA 709
M L + + Y TL E G+ E + L M +R
Sbjct: 412 KMSLRGVVADTVT-YNTLIQGFCELGKLEVAKELFQEMVSRRV 453
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 147/673 (21%), Positives = 312/673 (46%), Gaps = 87/673 (12%)
Query: 14 NHKIKMTSMKHKLT-IGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVF----SNTIHKNLV 68
NH M ++ ++ +G H+F I K G+V+ A+ + S+++ ++V
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFT--TLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLFDVM 124
YN I F K GK+ A + F ++ L V++ +MI + ++EA ++F+ +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 125 PERD----NFSWALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQF 177
+ +++ MI Y GK ++A LLE K +N ++ K G+
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 178 SDAEKVFNLM---PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLMV 230
+A KVF M +L +YN ++ + GK+ A + M + NV + N+MV
Sbjct: 360 DEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 231 SGFVNSGDLSSARQLFE----KIPNPNAVSWVTMLCGFARHGKITEARRLFDSM---PCK 283
S L A +FE K+ P+ +++ +++ G + G++ +A ++++ M C+
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 284 -NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYI----RVGKLDEAREV 338
N + + ++I + + ++ K++ M +++ ++N Y+ + G+ ++ R +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 339 YNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQ 390
+ ++ + D + + L+ GLI+ G +E ++F + + DT +N +I GFC+
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 391 SGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVS 442
G++++A L +M K V++ ++I G A+ ++D A +F+ + E N+V
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 443 WNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYIL 502
++SLI GF + +A L + ++G P+ T+ N L + ++
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW----------------NSLLDALV 703
Query: 503 KSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV-DLISWNSLISGYALNGYAIEAF 561
K+ IN+ AL+ Q ++C + +++ LI+G +AF
Sbjct: 704 KAEEINE-----ALVCF-----------QSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDL 621
+++M + + P +++ M+S + AG + LF + + P + Y+ +++
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-PDSACYNAMIEG 806
Query: 622 LGRMGRLEEAFNV 634
L R +AF++
Sbjct: 807 LSNGNRAMDAFSL 819
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 235/494 (47%), Gaps = 56/494 (11%)
Query: 29 GSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFS---NTIHKNLVTYNSMISVFAKNGKISD 85
GSI V N + L K+GKV+EA++VF NL TYN +I + + GK+
Sbjct: 338 GSI--PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 86 ARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMIT 137
A +L D M + N+ + N M+ + ++EA +F+ M + D ++ +I
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 138 CYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVF------NLMP 188
+ G+++ A ++ E + D + ++ + ++I + G+ D K++ N P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQ 244
DL N+ + + G+ FE++ + V S+++++ G + +G + +
Sbjct: 516 --DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 245 LFEKIPNPNAV----SWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYA 296
LF + V ++ ++ GF + GK+ +A +L + M K VV++ ++I A
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 297 QDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE-- 350
+ ++DEA LF + K + V ++++I+G+ +VG++DEA + ++ K +
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 351 --TALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQM 404
+L+ L++ ++EA F + T + + + +I G C+ + ++A +++M
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 405 PKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS----WNSLITGFLQNSLY 456
K+ +++S+ TMISG A+AG + A +F + V +N++I G +
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 457 FDALKSLVLMGREG 470
DA R G
Sbjct: 814 MDAFSLFEETRRRG 827
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 148/669 (22%), Positives = 291/669 (43%), Gaps = 81/669 (12%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNL-VSWNT---MIAGYLHNSMVEEASKLFDVM 124
+YNS++ V A+ Q+ +MS S NT M+ G + + + E + +M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 125 PE---RDNFS-WALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKGQF 177
+ R FS + +I ++ + L + + + + + +I G+AK+G+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 178 SDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLM 229
A + + M D+V YN + + + GK+ +A FF ++ + + V++ M
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 230 VSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCK-- 283
+ + L A ++FE + P ++ TM+ G+ GK EA L + K
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 284 --NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGV----SWTTIINGYIRVGKLDEARE 337
+V+++N ++ + ++DEA+K+F +M KD ++ +I+ R GKLD A E
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 338 VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
+ + M + + +F + T N M+ C+S ++DEA
Sbjct: 399 LRDSM----------------------QKAGLFPNVRT-----VNIMVDRLCKSQKLDEA 431
Query: 398 LDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITG 449
+F +M K + +++ ++I G + G++D A +++ M + N + + SLI
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 450 FLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
F + D K M + PD + G + E I ++ D
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 510 LFVSNALIAMYAKCGRVESAEQVFTAIE---CV-DLISWNSLISGYALNGYAIEAFKAFK 565
+ LI K G ++F +++ CV D ++N +I G+ G +A++ +
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRM 625
+M ++ P VT+ ++ + ++ LF+ + IE YS L+D G++
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE-EAKSKRIELNVVIYSSLIDGFGKV 670
Query: 626 GRLEEAFNVVRGMDVKA---NAGLWGSLLGACRVHKNLEIGE----FAAMRLSELEPHNA 678
GR++EA+ ++ + K N W SLL A + K EI E F +M+ + P+
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDA--LVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 679 SNYITLSNM 687
+ I ++ +
Sbjct: 729 TYGILINGL 737
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 46 LGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----N 97
L K+ +++EA +F S I N+V Y+S+I F K G+I +A + +++ Q+ N
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDVMPE----RDNFSWALMITCYTRKGKLEKARELLE 153
L +WN+++ + + EA F M E + ++ ++I + K KA +
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 154 LVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNG 206
+ K T + +I+G AK G ++A +F+ V D YN+M+ G +
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Query: 207 KMGLALHFFEKMAEKNVVSWN 227
+ A FE+ + + N
Sbjct: 812 RAMDAFSLFEETRRRGLPIHN 832
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 219/471 (46%), Gaps = 50/471 (10%)
Query: 57 RVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNS 112
++ ++ + L T+N ++ V K G + + +L DK+ +R NL ++N I G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 113 MVEEASKLFDVM----PERDNFSWALMITCYTRKGKLEKARELL-ELVPDKL--DTACWN 165
++ A ++ + P+ D ++ +I + K ++A L ++V + L D+ +N
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 166 AVIAGYAKKGQFSDAEK-----VFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFE---- 216
+IAGY K G AE+ VFN V D +Y S++ G G+ AL F
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGF-VPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 217 KMAEKNVVSWNLMVSGFVNSGDLSSARQLF----EKIPNPNAVSWVTMLCGFARHGKITE 272
K + NV+ +N ++ G N G + A QL EK P ++ ++ G + G +++
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 273 ARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKM----PHKDGVSWTTIIN 324
A L M K ++ ++N +I Y+ L+++ A+++ M D ++ +++N
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLSTR---- 376
G + K ++ E Y M K A L+ L + ++DEA + ++ +
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVS-----WNTMISGYAQAGQMDSAENI 431
D + + ++I GFC++G +D A LFR+M + VS +N +I + + + AE +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 432 FQAMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
FQ M +R + ++ ++ GF + K L+ M G P +T
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 128/644 (19%), Positives = 278/644 (43%), Gaps = 66/644 (10%)
Query: 31 IGGKHVFNKNQQII----HLGKLGKVEEAVRVFSNTIHKNLV--TYNSMISVFAKNGKIS 84
+G KH + + +I + GK +EE + + +++ Y + + + GK+
Sbjct: 34 VGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQ 93
Query: 85 DARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMI 136
+A +F++M + + S+N +++ + + ++A K++ M +R D +S+ + +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 137 TCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKD-- 191
+ + + A LL + + ++ + V+ G+ ++ ++ ++F M
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS 213
Query: 192 --LVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQ- 244
L ++N +L + G + +K+ ++ N+ ++NL + G G+L A +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 245 ---LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQ 297
L E+ P P+ +++ ++ G ++ K EA M + + ++N +IA Y +
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 298 DLQIDEAVKL--------FIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAA 349
+ A ++ F+ D ++ ++I+G G+ + A ++N+ K I
Sbjct: 334 GGMVQLAERIVGDAVFNGFVP----DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 350 ET----ALMSGLIQTGRVDEASKMFNQLSTRDTI----CWNSMIAGFCQSGRMDEALDLF 401
L+ GL G + EA+++ N++S + I +N ++ G C+ G + +A L
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 402 RQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQN 453
+ M K + ++N +I GY+ +M++A I M + ++ ++NSL+ G +
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
S + D +++ M +G P+ TF L E + D
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 514 NALIAMYAKCGRVESAEQVFTAIECVDLIS-----WNSLISGYALNGYAIEAFKAFKQML 568
LI + K G ++ A +F +E +S +N +I + A K F++M+
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 569 SEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLA 612
+ PD T+ M+ G N G M+E+ I L
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 143/596 (23%), Positives = 259/596 (43%), Gaps = 67/596 (11%)
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAG--------YTQNGKMGLALHFF 215
+ +VI G+F E+V L+ +++ V N ML G Y + GK+ A++ F
Sbjct: 43 YRSVIEKLGYYGKFEAMEEV--LVDMRENVG-NHMLEGVYVGAMKNYGRKGKVQEAVNVF 99
Query: 216 EKM----AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARH 267
E+M E V S+N ++S V+SG A +++ ++ + P+ S+ + F +
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 159
Query: 268 GKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWT-TI 322
+ A RL ++M + NVV++ ++ + ++ E +LF KM GVS +
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM-LASGVSLCLST 218
Query: 323 INGYIRV----GKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKM----F 370
N +RV G + E ++ +++ + + + GL Q G +D A +M
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 371 NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMD 426
Q D I +N++I G C++ + EA +M + +S ++NT+I+GY + G +
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 427 SAENIFQAMEERNIV----SWNSLITGFLQNSLYFDALKSLVLMGR---EGKKPDQSTFX 479
AE I V ++ SLI G + ++L L +G KP+ +
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG---ETNRALALFNEALGKGIKPNVILYN 395
Query: 480 XXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI--- 536
QL + + G I ++ N L+ K G V A+ + +
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 537 -ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQG 595
D+ ++N LI GY+ A + ML V PD T+ +L+
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 596 LDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGM---DVKANAGLWGSLL- 651
++ +K MVE P ++ L++ L R +L+EA ++ M V +A +G+L+
Sbjct: 516 METYKTMVEK-GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 652 GACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
G C+ + +L+ G + R E E + S+ N+ A E+L V M +K
Sbjct: 575 GFCK-NGDLD-GAYTLFRKME-EAYKVSSSTPTYNIIIHA----FTEKLNVTMAEK 623
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 177/386 (45%), Gaps = 66/386 (17%)
Query: 50 GKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLV----SW 101
G+ A+ +F+ + K N++ YN++I + G I +A QL ++MS++ L+ ++
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPD 157
N ++ G V +A L VM + D F++ ++I Y+ + K+E A E+L+++ D
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 158 K---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGL 210
D +N+++ G K +F D + + M K +L ++N +L + K+
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 211 ALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFAR 266
AL E+M K+V V++ ++ GF +GDL A LF
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR------------------- 590
Query: 267 HGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTI 322
K+ EA ++ S P ++N +I A+ + L + A KLF +M + DG ++ +
Sbjct: 591 --KMEEAYKVSSSTP-----TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 323 INGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWN 382
++G+ + G ++ + +M E + L GRV N L D +
Sbjct: 644 VDGFCKTGNVNLGYKFLLEM------MENGFIPSLTTLGRV------INCLCVEDRVYEA 691
Query: 383 S-MIAGFCQSGRMDEALDLFRQMPKK 407
+ +I Q G + EA++ + KK
Sbjct: 692 AGIIHRMVQKGLVPEAVNTICDVDKK 717
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 158/732 (21%), Positives = 321/732 (43%), Gaps = 98/732 (13%)
Query: 54 EAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSW------------ 101
E VRVF V ++ ++ V+A+ G + +A +FD M +
Sbjct: 143 ELVRVFKEFSFSPTV-FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLV 201
Query: 102 ---NTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEK----ARELLEL 154
+A ++++ M+ F+V P D F+ ++++ Y R G ++K A+E
Sbjct: 202 RKGENFVALHVYDQMIS-----FEVSP--DVFTCSIVVNAYCRSGNVDKAMVFAKETESS 254
Query: 155 VPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGL 210
+ +L+ +N++I GYA G +V LM +++V+Y S++ GY + G M
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEE 314
Query: 211 ALHFFEKMAEKNVVS----WNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTMLC 262
A H FE + EK +V+ + +++ G+ +G + A ++ + + N +++
Sbjct: 315 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 263 GFARHGKITEARRLFDSM------PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDG 316
G+ + G++ EA ++F M P + ++N ++ Y + +DEA+KL +M K+
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHH--TYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Query: 317 V----SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASK 368
V ++ ++ GY R+G + ++ M + + A+ + L+ L + G +EA K
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 369 MFNQLSTR----DTICWNSMIAGFCQSGRMDEA------LDLFRQMPKKNSVSWNTMISG 418
++ + R DTI N MI+G C+ +++EA +++FR P ++ + G
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ--TYQALSHG 550
Query: 419 YAQAGQMDSAENIFQAMEERNIVS----WNSLITGFLQNSLYFDALKSLVLMGR-EGKKP 473
Y + G + A + + ME + I +N+LI+G + + + + LV+ R G P
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYR-HLNKVADLVIELRARGLTP 609
Query: 474 DQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF 533
+T+ +++ G ++ + + + + +++ A +
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLL 669
Query: 534 TAIECVDLISWNSLISGYA-----LNGYAIEAFKAFKQMLSEE-------VVPDQVTFIG 581
I + ++ L+ GY L A K K S E +VP+ + +
Sbjct: 670 QKI-----VDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNV 724
Query: 582 MLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVK 641
++ AG LF ++ P Y+ L+ G + +AF + M +K
Sbjct: 725 AIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALK 784
Query: 642 A---NAGLWGSLL-GACRVHKNLEIGEFAAMRLSE--LEPHNASNYITLSNMHAEAGRWE 695
N + +L+ G C++ N++ + +L + + P NA Y TL + ++G
Sbjct: 785 GIIPNIVTYNALIKGLCKL-GNVDRAQRLLHKLPQKGITP-NAITYNTLIDGLVKSGNVA 842
Query: 696 EVERLRVLMRDK 707
E RL+ M +K
Sbjct: 843 EAMRLKEKMIEK 854
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 144/669 (21%), Positives = 283/669 (42%), Gaps = 117/669 (17%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVF----SNTIHKNLVTYNSMISVFAKNGKISDARQLF 90
+V N I +G VE RV + +N+VTY S+I + K G + +A +F
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 91 DKMSQRNLVS----WNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLE 146
+ + ++ LV+ + ++ GY + +A ++ D M E
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE-------------------- 359
Query: 147 KARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGY 202
+ + +T N++I GY K GQ +AE++F+ M D +YN+++ GY
Sbjct: 360 --------IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 203 TQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGD----LSSARQLFEKIPNPNA 254
+ G + AL ++M +K VV ++N+++ G+ G LS + + ++ N +
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEA------ 304
+S T+L + G EA +L++++ + + ++ N MI+ + +++EA
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 305 VKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQT 360
V +F P ++ + +GY +VG L EA V M K I L+SG +
Sbjct: 532 VNIFRCKPAVQ--TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY 589
Query: 361 GRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMI 416
+++ + + +L R + ++I G+C G +D+A +M +K ++ N I
Sbjct: 590 RHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK-GITLNVNI 648
Query: 417 -----SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGK 471
+ + ++D A + Q IV ++ L+ G+ + +A + L
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQ-----KIVDFDLLLPGYQSLKEFLEASATTCL------ 697
Query: 472 KPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQ 531
++ + K + + V N IA K G++E A +
Sbjct: 698 -----------------KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARK 740
Query: 532 VFTAIECVDLI-----SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
+F+ + D ++ LI G A+ G +AF +M + ++P+ VT+ ++
Sbjct: 741 LFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGL 800
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFN---------VVRG 637
G ++ L + + I P A Y+ L+D L + G + EA +VRG
Sbjct: 801 CKLGNVDRAQRLLHKLPQK-GITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRG 859
Query: 638 MDVKANAGL 646
D + + +
Sbjct: 860 SDKQGDVDI 868
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 120/526 (22%), Positives = 236/526 (44%), Gaps = 88/526 (16%)
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARELLE-- 153
++N +I +S V+ A +LFD MPE+ + F++ +++ Y + G +K ELL
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 154 ----LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQN 205
++P+K+ +N +++ + ++G+ D+EK+ M V D+V++NS ++ +
Sbjct: 209 ESFGVLPNKV---IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKE 265
Query: 206 GKMGLALHFFEKM--------AEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAV-- 255
GK+ A F M N +++NLM+ GF G L A+ LFE I + +
Sbjct: 266 GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325
Query: 256 --SWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFI 309
S+ L G RHGK EA + M K ++ S+N ++ + + +A +
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 310 KMPH----KDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTG 361
M D V++ +++GY VGK+D A+ + +M + L+ L + G
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Query: 362 RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSVSWNTMIS 417
R+ EA ++ +++ + DT+ N ++ G C SG +D+A+++ + M S + +
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL-- 503
Query: 418 GYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
G + G +D +++ + +++++++L+ G + + +A M E +PD
Sbjct: 504 GNSYIGLVD--DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVA 561
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
+ N I + K G++ SA +V +E
Sbjct: 562 Y-----------------------------------NIFIHHFCKQGKISSAFRVLKDME 586
Query: 538 ---C-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
C L ++NSLI G + E +M + + P+ T+
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 150/624 (24%), Positives = 279/624 (44%), Gaps = 82/624 (13%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLF 121
N V YN+++S F + G+ D+ ++ +KM + L V++N+ I+ V +AS++F
Sbjct: 216 NKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIF 275
Query: 122 DVM--------PERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAK 173
M P ++ ++ LM+ + + G LE A+ L E + + D A
Sbjct: 276 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA----------- 324
Query: 174 KGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLM 229
L SYN L G ++GK A ++M +K ++ S+N++
Sbjct: 325 -----------------SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 230 VSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM---PC 282
+ G G LS A+ + + P+AV++ +L G+ GK+ A+ L M C
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 283 -KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEARE 337
N + N ++ + + +I EA +L KM K D V+ I++G G+LD+A E
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 338 VYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA 397
+ M AA L + I G VD++ N L D I +++++ G C++GR EA
Sbjct: 488 IVKGMRVHGSAALGNLGNSYI--GLVDDSLIENNCLP--DLITYSTLLNGLCKAGRFAEA 543
Query: 398 LDLFRQM----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEE----RNIVSWNSLITG 449
+LF +M + +SV++N I + + G++ SA + + ME+ +++ ++NSLI G
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603
Query: 450 FLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYIND 509
+ F+ + M +G P+ T+ + L + +++ +
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Query: 510 LFVSNALIAMYAKCGRVESAEQVF-TAI------ECVDLISWNSLISGYALNGYAIEAFK 562
+F LI + K + A++VF TA+ E + + +N L++ G ++A +
Sbjct: 664 VFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAA----GQLLKATE 719
Query: 563 AFKQMLSEEVVPDQVTFIGML-SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDL 621
+ +L + ++ S C L L K + + +P A ++D
Sbjct: 720 LLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAA--LMPVIDG 777
Query: 622 LGRMGRLEEAFNVVRGMDVKANAG 645
LG+MG +EA + M A+ G
Sbjct: 778 LGKMGNKKEANSFADKMMEMASVG 801
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 193/479 (40%), Gaps = 111/479 (23%)
Query: 255 VSWV---TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKM 311
VSW+ +LCG A ++N +I A +D A +LF +M
Sbjct: 131 VSWLYKDMVLCGIAPQ-----------------TYTFNLLIRALCDSSCVDAARELFDEM 173
Query: 312 PHK----DGVSWTTIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTG 361
P K + ++ ++ GY + G D+ E+ N M P K I ++S + G
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIY--NTIVSSFCREG 231
Query: 362 RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRM--------DEALDLFRQMPKKNS 409
R D++ KM ++ D + +NS I+ C+ G++ D LD + +P+ NS
Sbjct: 232 RNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERN------------------------------ 439
+++N M+ G+ + G ++ A+ +F+++ E +
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351
Query: 440 ---------IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXX 490
I S+N L+ G + + DA + LM R G PD T+
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 491 XQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNS 546
L + ++++ + + + N L+ K GR+ AE++ + +D ++ N
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 547 LISGYALNG---YAIEAFKAFK--------------------QMLSEEVVPDQVTFIGML 583
++ G +G AIE K + ++ +PD +T+ +L
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 584 SACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKA 642
+ AG + +LF M+ + ++P + Y+ + + G++ AF V++ M+ K
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 43 IIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR-- 96
I H K GK+ A RV + HK+L TYNS+I +I + L D+M ++
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 97 --NLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKARE 150
N+ ++NT I VE+A+ L D M ++ + FS+ +I + + + A+E
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE 685
Query: 151 LLE 153
+ E
Sbjct: 686 VFE 688
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 126/577 (21%), Positives = 255/577 (44%), Gaps = 77/577 (13%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHN----SMVEEASKLFDVM 124
++++ SV G + +A Q F KM + + G LH ++ + F M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 125 ----PERDNFSWALMITCYTRKGKLEKARELLE------LVPDKLDTACWNAVIAGYAKK 174
F++ +MI C ++G +E AR L E LVPD T +N++I G+ K
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD---TVTYNSMIDGFGKV 310
Query: 175 GQFSDA----EKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSW 226
G+ D E++ ++ D+++YN+++ + + GK+ + L F+ +M + NVVS+
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
+ +V F G + A + + + PN ++ +++ + G +++A RL + M
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM-L 429
Query: 283 KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQM 342
+ V WN V++T +I+G ++ EA E++ +M
Sbjct: 430 QVGVEWNV--------------------------VTYTALIDGLCDAERMKEAEELFGKM 463
Query: 343 PC----KDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRM 394
++A+ AL+ G ++ +D A ++ N+L R D + + + I G C ++
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 395 DEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNI----VSWNSL 446
+ A + +M K NS+ + T++ Y ++G ++ M+E +I V++ L
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 447 ITGFLQNSLYFDALKSLVLMGRE-GKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSG 505
I G +N L A+ + + G + + + F + L E +++ G
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 506 YINDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAIEAF 561
+ D +L+ K G V A + + + DL+++ SL+ G + +A
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 562 KAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
++M+ E + PD+V I +L G ++ ++L
Sbjct: 704 SFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/547 (22%), Positives = 233/547 (42%), Gaps = 77/547 (14%)
Query: 35 HVFNKNQQ---IIH-LGKLGKVEEAVRVFSNTI----HKNLVTYNSMISVFAKNGKISDA 86
VF K + ++H KLGK ++ R F + I + TYN MI K G + A
Sbjct: 222 RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAA 281
Query: 87 RQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLF----DVMPERDNFSWALMITC 138
R LF++M R L V++N+MI G+ +++ F D+ E D ++ +I C
Sbjct: 282 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 341
Query: 139 YTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSM 198
+ + GKL E F K L P ++VSY+++
Sbjct: 342 FCKFGKLPIGLE--------------------------FYREMKGNGLKP--NVVSYSTL 373
Query: 199 LAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQLFEKIPNP-- 252
+ + + G M A+ F+ M +V ++ ++ G+LS A +L ++
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 253 --NAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVK 306
N V++ ++ G ++ EA LF M N+ S+NA+I + + +D A++
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 307 LFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLI 358
L ++ + D + + T I G + K++ A+ V N+M I A T LM
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 359 QTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQSGRMDEALDLFRQMP-----KKNS 409
++G E + +++ D + + +I G C++ + +A+D F ++ + N+
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SWNSLITGFLQNSLYFDALKSLVL 465
+ MI G + Q+++A +F+ M ++ +V ++ SL+ G + +AL
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 466 MGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGR 525
M G K D + Q E ++ G D + +++ + + G
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 733
Query: 526 VESAEQV 532
++ A ++
Sbjct: 734 IDEAVEL 740
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/445 (20%), Positives = 191/445 (42%), Gaps = 32/445 (7%)
Query: 226 WNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM- 280
++ + S ++ G L A Q F K+ P S +L FA+ GK + +R F M
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 281 ---PCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLD 333
V ++N MI ++ ++ A LF +M + D V++ ++I+G+ +VG+LD
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 334 EAREVYNQMP---CK-DIAAETALMSGLIQTGRVDEASKMFNQLS----TRDTICWNSMI 385
+ + +M C+ D+ AL++ + G++ + + ++ + + +++++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 386 AGFCQSGRMDEALDLFRQMPK----KNSVSWNTMISGYAQAGQMDSA----ENIFQAMEE 437
FC+ G M +A+ + M + N ++ ++I + G + A + Q E
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 438 RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQL 497
N+V++ +LI G +A + M G P+ +++ +L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 498 HEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI-EC---VDLISWNSLISGYAL 553
+ G DL + I ++E+A+ V + EC + + + +L+ Y
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 554 NGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAE 613
+G E +M ++ VTF ++ L ++ +D F + DF ++ A
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 614 HYSCLVDLLGRMGRLEEAFNVVRGM 638
++ ++D L + ++E A + M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQM 639
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 220/459 (47%), Gaps = 77/459 (16%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEAS 118
I ++T+N+M+ K G + +++ +M +RN+ V++N +I G+ N +EEA
Sbjct: 234 IMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEAR 293
Query: 119 KL--------FDVMPERDNFSWALMITCYTRKGKLEKA----RELLE--LVPDKLDTACW 164
+ F V P +S+ +I Y ++G + A E+L + P T+ +
Sbjct: 294 RFHGDMRRSGFAVTP----YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP---TTSTY 346
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKM----AE 220
N I G+ DA ++ + M D+VSYN+++ GY + GK A F+ +
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 221 KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRL 276
++V++N ++ G SG+L A++L E++ P+ +++ T++ GF ++G ++ A +
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 277 FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAR 336
+D M K + DG ++TT G +R+G D+A
Sbjct: 467 YDEMLRKGI---------------------------KPDGYAYTTRAVGELRLGDSDKAF 499
Query: 337 EVYNQM-----PCKDIAAETALMSGLIQTGRVDEA----SKMFNQLSTRDTICWNSMIAG 387
++ +M D+ + GL + G + +A K+F D + + ++I G
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 388 FCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER----N 439
+ ++G+ A +L+ +M +K + +++ +I G+A+AG+++ A M++R N
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 440 IVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTF 478
+++ N+L+ G + +A + L M EG P++ ++
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 214/440 (48%), Gaps = 50/440 (11%)
Query: 48 KLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLFDKMSQRNLV---- 99
K G +E +++ +N+ VTYN +I+ F+KNGK+ +AR+ M +
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 100 SWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMITCYTRKGKLEKARELLE 153
S+N +I GY + ++A + D M P ++ + C G+++ ARELL
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC--DFGRIDDARELLS 367
Query: 154 LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKD----LVSYNSMLAGYTQNGKMG 209
+ D +N ++ GY K G+F +A +F+ + D +V+YN+++ G ++G +
Sbjct: 368 SMAAP-DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 210 LALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNAVSWVTML 261
A E+M + +V+++ +V GFV +G+LS A ++++++ P+ ++ T
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 262 CGFARHGKITEARRLFDSM-----PCKNVVSWNAMIAAYAQDLQIDEAV----KLFIKMP 312
G R G +A RL + M ++ +N I + + +A+ K+F
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 313 HKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASK 368
D V++TT+I GY+ G+ AR +Y++M K + L+ G + GR+++A +
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 369 MFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYA 420
++ R + + N+++ G C++G +DEA +M ++ N S+ +IS
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 421 QAGQMDSAENIFQAMEERNI 440
+ + +++ M ++ I
Sbjct: 667 DFEKWEEVVKLYKEMLDKEI 686
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 241/543 (44%), Gaps = 95/543 (17%)
Query: 90 FDKMSQRNLV----SWNTMIAGYLHNSMVEEASKLFD------VMPERDNFSWALMITCY 139
F+KM ++ + + N ++ + M+ +AS +++ +MP F+ ++ +C+
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFN-TMLDSCF 249
Query: 140 TRKGKLEKAREL-LELVPDKLD--TACWNAVIAGYAKKGQFSDAEKV--------FNLMP 188
+ G LE+ ++ LE+ ++ +N +I G++K G+ +A + F + P
Sbjct: 250 -KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP 308
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV----SWNLMVSGFVNSGDLSSARQ 244
S+N ++ GY + G A ++M + ++N+ + + G + AR+
Sbjct: 309 Y----SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 364
Query: 245 LFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQ 300
L + P+ VS+ T++ G+ + GK EA LFD + ++V++N +I +
Sbjct: 365 LLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 301 IDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIA----AETA 352
++ A +L +M + D +++TT++ G+++ G L A EVY++M K I A T
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 353 LMSGLIQTGRVDEASKMFNQL-----STRDTICWNSMIAGFCQSGRMDEALDLFRQMPK- 406
G ++ G D+A ++ ++ D +N I G C+ G + +A++ R++ +
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 407 ---KNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDA 459
+ V++ T+I GY + GQ A N++ M + +++++ LI G + A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 460 LKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAM 519
+ M + G +P+ T NAL+
Sbjct: 605 FQYSTEMKKRGVRPNVMT-----------------------------------HNALLYG 629
Query: 520 YAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPD 575
K G ++ A + +E + S+ LIS E K +K+ML +E+ PD
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Query: 576 QVT 578
T
Sbjct: 690 GYT 692
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 193/453 (42%), Gaps = 28/453 (6%)
Query: 280 MPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD----GVSWTTIINGYIRVGKLDEA 335
MP V+++N M+ + + ++ K++++M ++ V++ +ING+ + GK++EA
Sbjct: 235 MP--TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 336 REVYNQMPCKDIAAET----ALMSGLIQTGRVDEA----SKMFNQLSTRDTICWNSMIAG 387
R + M A L+ G + G D+A +M N T +N I
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 388 FCQSGRMDEALDLFRQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSW 443
C GR+D+A +L M + VS+NT++ GY + G+ A +F + +IV++
Sbjct: 353 LCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
N+LI G ++ A + M + PD T+ + ++++ +L+
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 504 SGYINDLFVSNALIAMYAKCGRVESA-----EQVFTAIECVDLISWNSLISGYALNGYAI 558
G D + + G + A E V T DL +N I G G +
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
+A + +++ +VPD VT+ ++ G +L+ M+ + P Y L
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVITYFVL 591
Query: 619 VDLLGRMGRLEEAFNVVRGMD---VKANAGLWGSLL-GACRVHKNLEIGEFAAMRLSELE 674
+ + GRLE+AF M V+ N +LL G C+ E + E
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Query: 675 PHNASNYITLSNMHAEAGRWEEVERLRVLMRDK 707
P N +Y L + + + +WEEV +L M DK
Sbjct: 652 PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 169/365 (46%), Gaps = 40/365 (10%)
Query: 40 NQQIIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMS----Q 95
N I L G++++A + S+ ++V+YN+++ + K GK +A LFD +
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 96 RNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRKGKLEKAREL 151
++V++NT+I G + +E A +L + M + D ++ ++ + + G L A E+
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 152 LELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMP--------VKDLVSYNSMLA 200
+ + K D + G + G D++K F L DL YN +
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLG---DSDKAFRLHEEMVATDHHAPDLTIYNVRID 523
Query: 201 GYTQNGKMGLALHFFEKMAEKNV----VSWNLMVSGFVNSGDLSSARQLFEKIPN----P 252
G + G + A+ F K+ + V++ ++ G++ +G AR L++++ P
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 583
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLF 308
+ +++ ++ G A+ G++ +A + M + NV++ NA++ + IDEA +
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Query: 309 IKMPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRV 363
KM ++G+ S+T +I+ K +E ++Y +M K+I + L +
Sbjct: 644 CKM-EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Query: 364 DEASK 368
D S+
Sbjct: 703 DHESR 707
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 139/588 (23%), Positives = 259/588 (44%), Gaps = 85/588 (14%)
Query: 41 QQIIHLGKLGK-VEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQR--- 96
Q + L +GK +E R+ + I+ ++ YN +I K +++DA QLFD+M R
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246
Query: 97 -NLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNFSWALMITCYTRKGKLEKARELLELV 155
+L+++NT+I GY E++ K+ + M + D+ +L+
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERM-KADHIEPSLIT------------------- 286
Query: 156 PDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLA 211
+N ++ G K G DAE V M V D +++ + GY+ N K A
Sbjct: 287 --------FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAA 338
Query: 212 LHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLF----EKIPNPNAVSWVTMLCG 263
L +E + N + +++++ G + A ++ K PN V + TM+ G
Sbjct: 339 LGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398
Query: 264 FARHGKITEARRLFDSMPCKNV----VSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS- 318
+ R G + AR ++M + + +++N +I + + +++ A K KM K GVS
Sbjct: 399 YCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-GVSP 457
Query: 319 ----WTTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMF 370
+ +I GY R + D+ ++ +M ++ + L++ L + ++ EA +
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 371 NQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQA 422
+ R +N +I G C G++++A ++M KK N V++NT+I G +
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 423 GQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVL---MGREGKKPDQ 475
G++ AE++ + + ++ ++NSLI+G+ + + + L M R G KP
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGY---GFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESA----EQ 531
T+ E LK DL V N ++ YA G +E A +Q
Sbjct: 635 KTYHLLISLCTKEGIELTERLFGEMSLKP----DLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 532 VFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
+ +D ++NSLI G G E +M + E+ P+ T+
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 128/569 (22%), Positives = 249/569 (43%), Gaps = 72/569 (12%)
Query: 164 WNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMA 219
+N +I G K + +DAE++F+ M + L++YN+++ GY + G + E+M
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 220 ----EKNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKIT 271
E +++++N ++ G +G + A + +++ + P+A ++ + G++ + K
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 272 EARRLF----DSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
A ++ DS N + + ++ A ++ +I++A ++ + K + V + T+I
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRDTICWNS 383
+GY R G L AR + M Q D + +N
Sbjct: 397 DGYCRKGDLVGARM---------------------------KIEAMEKQGMKPDHLAYNC 429
Query: 384 MIAGFCQSGRMDEALDLFRQMPKKN---SV-SWNTMISGYAQAGQMDSAENIFQAMEER- 438
+I FC+ G M+ A +M K SV ++N +I GY + + D +I + ME+
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 439 ---NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGN 495
N+VS+ +LI + S +A M G P + +
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 496 QLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE----CVDLISWNSLISGY 551
+ + +LK G +L N LI + G++ AE + I D+ ++NSLISGY
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 552 ALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPL 611
G +++M + P T+ ++S C+ +G++L + + + +++P
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT-----KEGIELTERLFGEMSLKPD 664
Query: 612 AEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL----WGSL-LGACRVHKNLEIGEFA 666
Y+ ++ G +E+AFN+ + M ++ + GL + SL LG +V K E+
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQM-IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Query: 667 -AMRLSELEPHNASNYITLSNMHAEAGRW 694
M E+EP A Y + H E +
Sbjct: 724 DEMNAREMEPE-ADTYNIIVKGHCEVKDY 751
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 33/227 (14%)
Query: 50 GKVEEAVR----VFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSW 101
GK+E+A R + I NLVTYN++I + GK+S+A L ++S++ L ++
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 102 NTMIAGYLHNSMVEEASKLFDVMPERDNF-----SWALMITCYTRKGKLEKARELLELVP 156
N++I+GY V+ L++ M +R ++ L+I+ T++G +E L +
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEM-KRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS 660
Query: 157 DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK-------DLVSYNSMLAGYTQNGKMG 209
K D +N V+ YA G D EK FNL D +YNS++ G + GK+
Sbjct: 661 LKPDLLVYNGVLHCYAVHG---DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717
Query: 210 LALHFFEKM----AEKNVVSWNLMVSGFVNSGDLSSA----RQLFEK 248
++M E ++N++V G D SA R++ EK
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 510 LFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFK 565
+F+ N LI K R+ AEQ+F + LI++N+LI GY G ++FK +
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 566 QMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRM 625
+M ++ + P +TF +L AG+ ++ K M +D P A +S L D
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM-KDLGFVPDAFTFSILFDGYSSN 332
Query: 626 GRLEEAFNVVR-GMD--VKANAGLWGSLLGA-CRVHK 658
+ E A V +D VK NA LL A C+ K
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 229/460 (49%), Gaps = 55/460 (11%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLF 121
++ +Y+++I+ AK GK+ DA +LFD+MS+R ++ +N +I G+L + A +L+
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Query: 122 DVMPERDNF-----SWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAK 173
D + E + + +MI+ ++ G+++ ++ E + + D ++++I G
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 174 KGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK---NVVSW 226
G AE VFN + + D+V+YN+ML G+ + GK+ +L + M K N+VS+
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSY 362
Query: 227 NLMVSGFVNSGDLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPC 282
N+++ G + +G + A ++ +P + ++ + G +G + +A + +
Sbjct: 363 NILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 283 K----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTT-----IINGYIRVGKLD 333
+V ++ ++I + +++EA L +M K GV + +I G IR +L
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS-KHGVELNSHVCNALIGGLIRDSRLG 481
Query: 334 EAREVYNQM---PCKD-IAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMI 385
EA +M C+ + + L+ GL + G+ EAS ++ D ++ ++
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 386 AGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAMEER--- 438
G C+ ++D AL+L+ Q + + + N +I G G++D A + ME R
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 439 -NIVSWNSLITGFLQNSLYFDALKSLVLMG---REGKKPD 474
N+V++N+L+ GF + D+ ++ V+ G + G +PD
Sbjct: 602 ANLVTYNTLMEGFFKVG---DSNRATVIWGYMYKMGLQPD 638
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 127/533 (23%), Positives = 234/533 (43%), Gaps = 46/533 (8%)
Query: 150 ELLELVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLM-------PVKDLVSYNSMLAGY 202
EL+ K D +VI Y K A VF M P + SYN++L +
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPA--IRSYNTLLNAF 124
Query: 203 TQNG---KMGLALHFFEKMA-EKNVVSWNLMVSGFVNSGDLSSARQLFEKI----PNPNA 254
+ K+ +FE N+ ++N+++ + AR + + P+
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 255 VSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQDLQIDEAVKLFIK 310
S+ T++ A+ GK+ +A LFD M +V +N +I + ++ A++L+ +
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 311 MPHKDGV-----SWTTIINGYIRVGKLDEAREVYNQMPC----KDIAAETALMSGLIQTG 361
+ V + +I+G + G++D+ +++ +M KD+ ++L+ GL G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 362 RVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS---VSWNT 414
VD+A +FN+L R D + +N+M+ GFC+ G++ E+L+L+R M KNS VS+N
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNI 364
Query: 415 MISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREG 470
+I G + G++D A I++ M + + ++ I G N AL + + G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 471 KKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAE 530
D + + + L + + K G + V NALI + R+ A
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 531 QVFTAI---EC-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSAC 586
+ C ++S+N LI G G EA K+ML PD T+ +L
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGL 544
Query: 587 SHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD 639
+ L+L+ ++ +E ++ L+ L +G+L++A V+ M+
Sbjct: 545 CRDRKIDLALELWHQFLQS-GLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 226/469 (48%), Gaps = 57/469 (12%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFD 91
VF+ + I L K GK+++A+ +F + ++ YN +I F K A +L+D
Sbjct: 184 VFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWD 243
Query: 92 KMSQ-----RNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCYTRK 142
++ + N+ + N MI+G V++ K+++ M E+D ++++ +I
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 143 GKLEKARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK---DLVSYN 196
G ++KA + + ++ +D +N ++ G+ + G+ ++ +++ +M K ++VSYN
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 197 SMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFEKIPNP 252
++ G +NGK+ A + M K + ++ + + G +G ++ A + +++ +
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 253 ----NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEA 304
+ ++ +++ + ++ EA L M V NA+I +D ++ EA
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 305 VKLFIKMPHKDG-----VSWTTIINGYIRVGKLDEAREVYNQM------PCKDIAAETAL 353
F++ K+G VS+ +I G + GK EA +M P D+ + L
Sbjct: 484 -SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP--DLKTYSIL 540
Query: 354 MSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKNS 409
+ GL + ++D A ++++Q D + N +I G C G++D+A+ + M +N
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 410 ----VSWNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITGF 450
V++NT++ G+ + G + A I+ M + +I+S+N+++ G
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 157/369 (42%), Gaps = 61/369 (16%)
Query: 36 VFNKNQQIIHLGKLGKVEEAVRVFSNTIHKN---LVTYNSMISVFAKNGKISDARQLFDK 92
V N + + GK++E++ ++ HKN +V+YN +I +NGKI +A ++
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRL 384
Query: 93 MSQRNLVSWNTMIAGYLHNSMVE-EASKLFDVMPE-------RDNFSWALMITCYTRKGK 144
M + + T ++H V +K VM E D +++A +I C +K +
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 145 LEKARELLELVPD---KLDTACWNAVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNS 197
LE+A L++ + +L++ NA+I G + + +A M +VSYN
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 198 MLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAVSW 257
++ G + GK G A F ++M E W P+ ++
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLEN---GW------------------------KPDLKTY 537
Query: 258 VTMLCGFARHGKITEARRL----FDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPH 313
+LCG R KI A L S +V+ N +I ++D+A+ + M H
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 314 KDG----VSWTTIINGYIRVGKLDEAREVYNQM------PCKDIAAETALMSGLIQTGRV 363
++ V++ T++ G+ +VG + A ++ M P DI + +M GL V
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP--DIISYNTIMKGLCMCRGV 655
Query: 364 DEASKMFNQ 372
A + F+
Sbjct: 656 SYAMEFFDD 664
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/585 (22%), Positives = 263/585 (44%), Gaps = 57/585 (9%)
Query: 87 RQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPER----DNFSWALMITCYTRK 142
R++ + + N VS + ++ Y+ A + +M +R + ++ +++ R
Sbjct: 96 RKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRN 155
Query: 143 GKLEKARELLE------LVPDKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DL 192
+ KA LL L+PD +N VI G+ + + A ++ N M L
Sbjct: 156 LECGKAVSLLREMRRNSLMPDVFS---YNTVIRGFCEGKELEKALELANEMKGSGCSWSL 212
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
V++ ++ + + GKM A+ F ++M E ++V + ++ GF + G+L + LF++
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE 272
Query: 249 I----PNPNAVSWVTMLCGFARHGKITEARRLFDSMPCK----NVVSWNAMIAAYAQDLQ 300
+ +P A+++ T++ GF + G++ EA +F+ M + NV ++ +I +
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 301 IDEAVKLFIKMPHKD----GVSWTTIINGYIRVGKLDEAREVYNQMPCK----DIAAETA 352
EA++L M KD V++ IIN + G + +A E+ M + D
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 353 LMSGLIQTGRVDEASKMF------NQLSTRDTICWNSMIAGFCQSGRMDEALDLFRQMPK 406
L+ GL G +DEASK+ + + D I +N++I G C+ R+ +ALD++ + +
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 407 K----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SWNSLITGFLQNSLYFD 458
K + V+ N +++ +AG ++ A +++ + + IV ++ ++I GF + +
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 459 ALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIA 518
A L M +P + +L E + + D+ N +I
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 519 MYAKCGRVESAEQVFTAIE----CVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVP 574
K G ++SAE + + DL +++ LI+ + GY EA F +M+ P
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Query: 575 DQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
D +L C G ++ +L K +V+ + L + +C V
Sbjct: 633 DAHICDSVLKYCISQGETDKLTELVKKLVDKDIV--LDKELTCTV 675
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 207/451 (45%), Gaps = 70/451 (15%)
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLF 121
+LVT+ +I F K GK+ +A +M + +LV + ++I G+ ++ LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 122 DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAVIAGYAKKGQFSDAE 181
D + ER + A+ +N +I G+ K GQ +A
Sbjct: 271 DEVLERGDSPCAIT----------------------------YNTLIRGFCKLGQLKEAS 302
Query: 182 KVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGF 233
++F M + ++ +Y ++ G GK AL M EK N V++N++++
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 234 VNSGDLSSARQLFE----KIPNPNAVSWVTMLCGFARHGKITEARRLF------DSMPCK 283
G ++ A ++ E + P+ +++ +L G G + EA +L S
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 284 NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVY 339
+V+S+NA+I ++ ++ +A+ ++ + K D V+ ++N ++ G +++A E++
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 340 NQMPCKDIA----AETALMSGLIQTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQS 391
Q+ I TA++ G +TG ++ A + ++ + +N +++ C+
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 392 GRMDEALDLFRQMPKKNS----VSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSW 443
G +D+A LF +M + N+ VS+N MI G +AG + SAE++ M ++ ++
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+ LI FL+ +A+ M G +PD
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 211/492 (42%), Gaps = 58/492 (11%)
Query: 177 FSDAEKVFNLMPVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSG 232
FS K+ + VS + +L Y Q K G A M ++ NV + N+++ G
Sbjct: 92 FSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKG 151
Query: 233 FVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVVSW 288
+ + A L ++ P+ S+ T++ GF ++ +A L + M SW
Sbjct: 152 LCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC-SW 210
Query: 289 NAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPC---- 344
+ V+W +I+ + + GK+DEA +M
Sbjct: 211 SL--------------------------VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 345 KDIAAETALMSGLIQTGRVDEASKMFNQLSTR-DTIC---WNSMIAGFCQSGRMDEALDL 400
D+ T+L+ G G +D +F+++ R D+ C +N++I GFC+ G++ EA ++
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 401 FRQMPKK----NSVSWNTMISGYAQAGQMDSAENIFQAM----EERNIVSWNSLITGFLQ 452
F M ++ N ++ +I G G+ A + M EE N V++N +I +
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 453 NSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK-SGYIN-DL 510
+ L DA++ + LM + +PD T+ ++L +LK S Y + D+
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 511 FVSNALIAMYAKCGRVESAEQVFT----AIECVDLISWNSLISGYALNGYAIEAFKAFKQ 566
NALI K R+ A ++ + D ++ N L++ G +A + +KQ
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 567 MLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMG 626
+ ++V + T+ M+ G+ N L C + ++P Y+CL+ L + G
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL-CKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 627 RLEEAFNVVRGM 638
L++A+ + M
Sbjct: 544 SLDQAWRLFEEM 555
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 205/417 (49%), Gaps = 46/417 (11%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQR----NLVSWNTMIAGYLHNSMVEEASKLFDV 123
+TYN++I F K G++ +A ++F+ M +R N+ ++ +I G +EA +L ++
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 124 MPERDN----FSWALMITCYTRKGKLEKARELLELVPDKL---DTACWNAVIAGYAKKGQ 176
M E+D ++ ++I + G + A E++EL+ + D +N ++ G KG
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 177 FSDAEKVFNLM------PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSW 226
+A K+ LM D++SYN+++ G + ++ AL ++ + EK + V+
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 227 NLMVSGFVNSGDLSSARQLFEKIPNP----NAVSWVTMLCGFARHGKITEARRLFDSMPC 282
N++++ + +GD++ A +L+++I + N+ ++ M+ GF + G + A+ L M
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 283 K----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPH----KDGVSWTTIINGYIRVGKLDE 334
+V +N ++++ ++ +D+A +LF +M D VS+ +I+G ++ G +
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 335 AREVYNQMP----CKDIAAETALMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIA 386
A + M D+ + L++ ++ G +DEA F+++ D +S++
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Query: 387 GFCQSGRMDEALDLFRQMPKKNSV-----SWNTMISGYAQAGQMDSAENIFQAMEER 438
G D+ +L +++ K+ V + M + MD A+ + + +++
Sbjct: 643 YCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDK 699
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/536 (22%), Positives = 225/536 (41%), Gaps = 86/536 (16%)
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFEKIPNPNAV 255
N+++A ++ LA F+ KM E + F+N LS + + ++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDT---------FINFVSLSGLLECYVQMRKT--- 123
Query: 256 SWVTMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK- 314
GFA +R F NV + N ++ ++L+ +AV L +M
Sbjct: 124 -------GFAFGVLALMLKRGF----AFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 315 ---DGVSWTTIINGYIRVGKLDEAREVYNQMP---CK-DIAAETALMSGLIQTGRVDEAS 367
D S+ T+I G+ +L++A E+ N+M C + L+ + G++DEA
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 368 KMFNQLS----TRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKN----SVSWNTMISGY 419
++ D + + S+I GFC G +D LF ++ ++ ++++NT+I G+
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 420 AQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQ 475
+ GQ+ A IF+ M ER N+ ++ LI G +AL+ L LM + ++P+
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 476 STFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVF-- 533
T+ ++ E + K D N L+ G ++ A ++
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 534 ----TAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHA 589
++ D+IS+N+LI G +A + ++ + D+VT +L++ A
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 590 GLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGLWGS 649
G N+ ++L+K + D I ++ Y+ ++D + G L NV +G+ K
Sbjct: 473 GDVNKAMELWK-QISDSKIVRNSDTYTAMIDGFCKTGML----NVAKGLLCK-------- 519
Query: 650 LLGACRVHKNLEIGEFAAMRLSELEPHNASNYITLSNMHAEAG------RWEEVER 699
MR+SEL+P LS++ E +EE++R
Sbjct: 520 ------------------MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 168/731 (22%), Positives = 307/731 (41%), Gaps = 131/731 (17%)
Query: 5 YSWDDTRGENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVF----S 60
Y D R N K + +K+KL IG N + L + G V+E +V+
Sbjct: 161 YVLDLCRKMN-KDERFELKYKLIIGCY--------NTLLNSLARFGLVDEMKQVYMEMLE 211
Query: 61 NTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEE 116
+ + N+ TYN M++ + K G + +A Q K+ + L ++ ++I GY ++
Sbjct: 212 DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDS 271
Query: 117 ASKLFDVMP----ERDNFSWALMI--TCYTRK---------------------------- 142
A K+F+ MP R+ ++ +I C R+
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 143 --GKLEKARELLELVPDKLDTA------CWNAVIAGYAKKGQFSDAEKVF------NLMP 188
E+ E L LV + +T + +I + +F A ++ LMP
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 189 VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSWNLMVSGFVNSG---DLSS 241
++++YN+++ GY + G + A+ E M + N ++N ++ G+ S +
Sbjct: 392 --NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGV 449
Query: 242 ARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQ 297
++ E+ P+ V++ +++ G R G A RL M + +V ++ +MI + +
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 298 DLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET-- 351
+++EA LF + K + V +T +I+GY + GK+DEA + +M K+ +
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 352 --ALMSGLIQTGRVDEAS----KMFNQLSTRDTICWNS-MIAGFCQSGRMDEALDLFRQM 404
AL+ GL G++ EA+ KM ++ + T+ ++ +I + G D A F+QM
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMV-KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 405 ----PKKNSVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGF---LQN 453
K ++ ++ T I Y + G++ AE++ M E ++ +++SLI G+ Q
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 454 SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVS 513
+ FD LK M G +P Q TF L +++L+ Y
Sbjct: 689 NFAFDVLKR---MRDTGCEPSQHTFL----------------SLIKHLLEMKYGKQKGSE 729
Query: 514 NALIAMYAKC---GRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSE 570
L AM VE E++ + S+ LI G G A K F M
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 571 E-VVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLVDLLG--RMGR 627
E + P ++ F +LS C N+ + M+ + L + SC V + G + G
Sbjct: 790 EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI---CVGHLPQLESCKVLICGLYKKGE 846
Query: 628 LEEAFNVVRGM 638
E +V + +
Sbjct: 847 KERGTSVFQNL 857
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 158/722 (21%), Positives = 285/722 (39%), Gaps = 165/722 (22%)
Query: 35 HVFNKNQQIIHLGKLGKVEEAVRVFSNTIHKNL----VTYNSMISVFAKNGKISDARQLF 90
+++ N+ + KLG VEEA + S + L TY S+I + + + A ++F
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 91 DKMS----QRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF---------------- 130
++M +RN V++ +I G ++EA LF M + + F
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 131 -----------------------SWALMITCYTRKGKLEKARELLELVPDK---LDTACW 164
++ ++I + K EKARELL + +K + +
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPVKDLV----SYNSMLAGYTQNG---KMGLALHFFEK 217
NA+I GY K+G DA V LM + L +YN ++ GY ++ MG+ E+
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER 456
Query: 218 MAEKNVVSWNLMVSGFVNSGDLSSARQLF------------------------------- 246
+VV++N ++ G SG+ SA +L
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 247 --------EKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNAMIAA 294
+K NPN V + ++ G+ + GK+ EA + + M KN +++NA+I
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 295 YAQDLQIDEAVKLFIKMPHKDGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALM 354
D ++ EA L KM K G+ T ++ +T L+
Sbjct: 577 LCADGKLKEATLLEEKMV-KIGLQPT--------------------------VSTDTILI 609
Query: 355 SGLIQTGRVDEASKMFNQL----STRDTICWNSMIAGFCQSGRMDEALDLFRQMPKKNSV 410
L++ G D A F Q+ + D + + I +C+ GR+ +A D+ +M ++N V
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM-RENGV 668
Query: 411 S-----WNTMISGYAQAGQMDSAENIFQAME----ERNIVSWNSLITGFLQ--------- 452
S ++++I GY GQ + A ++ + M E + ++ SLI L+
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 453 --------NSLYFDALKSLV-LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
N + FD + L+ M P+ ++ +V ++ +++ +
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Query: 504 S-GYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYALNGYAI 558
+ G V NAL++ K + A +V + CV L S LI G G
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKE 848
Query: 559 EAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCL 618
F+ +L D++ + ++ GL +LF M E + ++ YS L
Sbjct: 849 RGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM-EKNGCKFSSQTYSLL 907
Query: 619 VD 620
++
Sbjct: 908 IE 909
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 169/364 (46%), Gaps = 26/364 (7%)
Query: 319 WTTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSGLIQTGRVDEASKMFNQLS 374
+ T++N R G +DE ++VY +M C +I +++G + G V+EA++ +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 375 T----RDTICWNSMIAGFCQSGRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMD 426
D + S+I G+CQ +D A +F +MP ++N V++ +I G A ++D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 427 SAENIFQAMEE----RNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXX 482
A ++F M++ + ++ LI + +AL + M G KP+ T+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 483 XXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDLI 542
+ +L +L+ G + ++ NALI Y K G +E A V +E L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 543 ----SWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDL 598
++N LI GY + +A +ML +V+PD VT+ ++ +G + L
Sbjct: 426 PNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 599 FKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEA---FNVVRGMDVKANAGLWGSLL-GAC 654
M D + P Y+ ++D L + R+EEA F+ + V N ++ +L+ G C
Sbjct: 485 LSLM-NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 655 RVHK 658
+ K
Sbjct: 544 KAGK 547
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/587 (21%), Positives = 257/587 (43%), Gaps = 84/587 (14%)
Query: 43 IIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNL 98
++ + K EA V + ++ + + I+ F K GK+ +A +LF KM + N+
Sbjct: 236 LVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNV 295
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDN----FSWALMITCYTRKGKLEKARELLEL 154
V++NT+I G +EA + M ER ++++++ TR ++ A +L+
Sbjct: 296 VTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE 355
Query: 155 VPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGK 207
+ K + +N +I + + G + A ++ +LM K L +YN+++ GY +NG+
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE-----------KIPNPNAVS 256
A ++M + +N+ F + L + +F+ + +P
Sbjct: 416 ADNAERLLKEMLS---IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKMP 312
T++ G +HGK ++A L+ K V + NA++ + ++DEA ++ ++
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 313 HK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVD 364
+ D VS+ T+I+G KLDEA ++M + + + + L+ GL +V+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 365 EASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMI 416
EA + ++ D ++ MI G C++ R +E + F +M K N+V +N +I
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
Y ++G++ A + + M+ + I P+ +
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGI-------------------------------SPNSA 681
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T+ + L E + G ++F ALI Y K G++ E + +
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 537 ECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
++ I++ +I GYA +G EA + +M + +VPD +T+
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 125/602 (20%), Positives = 267/602 (44%), Gaps = 53/602 (8%)
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPE---RDNFSWALMITCYTRKGKLEKARELLELV 155
+ N ++ + + ++ + FDV+ + D + + I + + GK+E+A +L +
Sbjct: 227 TTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 156 PDK---LDTACWNAVIAGYAKKGQFSDA----EKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
+ + +N VI G G++ +A EK+ L++Y+ ++ G T+ ++
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 209 GLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQ----LFEKIPNPNAVSWVTM 260
G A ++M +K NV+ +N ++ F+ +G L+ A + + K + + ++ T+
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 261 LCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD- 315
+ G+ ++G+ A RL M N S+ ++I L D A++ +M ++
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466
Query: 316 ---GVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASK 368
G TT+I+G + GK +A E++ Q K +T AL+ GL + G++DEA +
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 369 MFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYA 420
+ ++ R D + +N++I+G C ++DEA +M K+ ++ +++ +I G
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 421 QAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
+++ A + + ++ +++ +I G + + + M + +P+
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
+ + +L E + G + +LI + RVE A+ +F +
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 537 ECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
L + +LI GY G ++ ++M S+ V P+++T+ M+ + G
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL---WGS 649
+ L M E I P + Y + + G + EAF +G D + A + W
Sbjct: 767 TEASRLLNEMREK-GIVPDSITYKEFIYGYLKQGGVLEAF---KGSDEENYAAIIEGWNK 822
Query: 650 LL 651
L+
Sbjct: 823 LI 824
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 154/318 (48%), Gaps = 42/318 (13%)
Query: 43 IIH-LGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMSQRN 97
++H L + GK++EA R+ + + + V+YN++IS K+ +A D+M +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 98 L----VSWNTMIAGYLHNSMVEEASKLFD------VMPERDNFSWALMITCYTRKGKLEK 147
L +++ +I G + + VEEA + +D ++P D +++++MI + + E+
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP--DVYTYSVMIDGCCKAERTEE 628
Query: 148 ARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
+E + + K +T +N +I Y + G+ S A ++ M K + +Y S++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 201 GYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSA----RQLFEKIPNP 252
G + ++ A FE+M E NV + ++ G+ G + R++ K +P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLF 308
N +++ M+ G+AR G +TEA RL + M K +V ++ I Y + + EA K
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK-- 806
Query: 309 IKMPHKDGVSWTTIINGY 326
D ++ II G+
Sbjct: 807 ----GSDEENYAAIIEGW 820
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/587 (21%), Positives = 257/587 (43%), Gaps = 84/587 (14%)
Query: 43 IIHLGKLGKVEEAVRVFSNTIHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNL 98
++ + K EA V + ++ + + I+ F K GK+ +A +LF KM + N+
Sbjct: 236 LVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNV 295
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPERDN----FSWALMITCYTRKGKLEKARELLEL 154
V++NT+I G +EA + M ER ++++++ TR ++ A +L+
Sbjct: 296 VTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE 355
Query: 155 VPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLAGYTQNGK 207
+ K + +N +I + + G + A ++ +LM K L +YN+++ GY +NG+
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 208 MGLALHFFEKMAEKNVVSWNLMVSGFVNSGDLSSARQLFE-----------KIPNPNAVS 256
A ++M + +N+ F + L + +F+ + +P
Sbjct: 416 ADNAERLLKEMLS---IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 257 WVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLFIKMP 312
T++ G +HGK ++A L+ K V + NA++ + ++DEA ++ ++
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 313 HK----DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVD 364
+ D VS+ T+I+G KLDEA ++M + + + + L+ GL +V+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 365 EASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMI 416
EA + ++ D ++ MI G C++ R +E + F +M K N+V +N +I
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 417 SGYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
Y ++G++ A + + M+ + I P+ +
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGI-------------------------------SPNSA 681
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
T+ + L E + G ++F ALI Y K G++ E + +
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 537 ECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
++ I++ +I GYA +G EA + +M + +VPD +T+
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 125/602 (20%), Positives = 267/602 (44%), Gaps = 53/602 (8%)
Query: 99 VSWNTMIAGYLHNSMVEEASKLFDVMPE---RDNFSWALMITCYTRKGKLEKARELLELV 155
+ N ++ + + ++ + FDV+ + D + + I + + GK+E+A +L +
Sbjct: 227 TTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 156 PDK---LDTACWNAVIAGYAKKGQFSDA----EKVFNLMPVKDLVSYNSMLAGYTQNGKM 208
+ + +N VI G G++ +A EK+ L++Y+ ++ G T+ ++
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 209 GLALHFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQ----LFEKIPNPNAVSWVTM 260
G A ++M +K NV+ +N ++ F+ +G L+ A + + K + + ++ T+
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 261 LCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKD- 315
+ G+ ++G+ A RL M N S+ ++I L D A++ +M ++
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466
Query: 316 ---GVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAET----ALMSGLIQTGRVDEASK 368
G TT+I+G + GK +A E++ Q K +T AL+ GL + G++DEA +
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 369 MFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYA 420
+ ++ R D + +N++I+G C ++DEA +M K+ ++ +++ +I G
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 421 QAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQS 476
+++ A + + ++ +++ +I G + + + M + +P+
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 477 TFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAI 536
+ + +L E + G + +LI + RVE A+ +F +
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 537 ECVDL----ISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLA 592
L + +LI GY G ++ ++M S+ V P+++T+ M+ + G
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 593 NQGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMDVKANAGL---WGS 649
+ L M E I P + Y + + G + EAF +G D + A + W
Sbjct: 767 TEASRLLNEMREK-GIVPDSITYKEFIYGYLKQGGVLEAF---KGSDEENYAAIIEGWNK 822
Query: 650 LL 651
L+
Sbjct: 823 LI 824
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 154/318 (48%), Gaps = 42/318 (13%)
Query: 43 IIH-LGKLGKVEEAVRVFSNTIHK----NLVTYNSMISVFAKNGKISDARQLFDKMSQRN 97
++H L + GK++EA R+ + + + V+YN++IS K+ +A D+M +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 98 L----VSWNTMIAGYLHNSMVEEASKLFD------VMPERDNFSWALMITCYTRKGKLEK 147
L +++ +I G + + VEEA + +D ++P D +++++MI + + E+
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP--DVYTYSVMIDGCCKAERTEE 628
Query: 148 ARELLELVPDK---LDTACWNAVIAGYAKKGQFSDAEKVFNLMPVKDL----VSYNSMLA 200
+E + + K +T +N +I Y + G+ S A ++ M K + +Y S++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 201 GYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSA----RQLFEKIPNP 252
G + ++ A FE+M E NV + ++ G+ G + R++ K +P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 253 NAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV----SWNAMIAAYAQDLQIDEAVKLF 308
N +++ M+ G+AR G +TEA RL + M K +V ++ I Y + + EA K
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK-- 806
Query: 309 IKMPHKDGVSWTTIINGY 326
D ++ II G+
Sbjct: 807 ----GSDEENYAAIIEGW 820
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 203/431 (47%), Gaps = 66/431 (15%)
Query: 46 LGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNGKISDARQLFDKMS----QRN 97
+ K+ + + + +F I L T N ++ + + A KM + +
Sbjct: 93 IAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPD 152
Query: 98 LVSWNTMIAGYLHNSMVEEASKLFDV---MPERDNF-SWALMITCYTRKGKLEKARELLE 153
LV++ +++ GY H + +E+A LFD M + N ++ +I C + L A EL
Sbjct: 153 LVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFN 212
Query: 154 LVP---DKLDTACWNAVIAGYAKKGQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNG 206
+ + + +NA++ G + G++ DA + M + +++++ +++ + + G
Sbjct: 213 QMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG 272
Query: 207 KMGLALHFFEKMAE----KNVVSWNLMVSGFVNSGDLSSARQLFEKIPN----PNAVSWV 258
K+ A + M + +V ++ +++G G L ARQ+F + PN V +
Sbjct: 273 KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYT 332
Query: 259 TMLCGFARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVS 318
T++ GF + ++ + ++F M K VV+ + ++
Sbjct: 333 TLIHGFCKSKRVEDGMKIFYEMSQKGVVA---------------------------NTIT 365
Query: 319 WTTIINGYIRVGKLDEAREVYNQMPCK----DIAAETALMSGLIQTGRVDEASKMFNQLS 374
+T +I GY VG+ D A+EV+NQM + DI L+ GL G+V++A +F +
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 375 TRD----TICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMISGYAQAGQMD 426
R+ + + +I G C+ G++++A DLF + K N +++ TMISG+ + G +
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 427 SAENIFQAMEE 437
A+++F+ M+E
Sbjct: 486 EADSLFKKMKE 496
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 209/479 (43%), Gaps = 110/479 (22%)
Query: 176 QFSDAEKVFNLM----PVKDLVSYNSMLAGYTQNGKMGLALHFFEKMA------------ 219
QF+DA +F M P+ ++ + +L+ + + + + FE+M
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 220 ---------------------------EKNVVSWNLMVSGFVNSGDLSSARQLFEKIP-- 250
E ++V++ +++G+ + + A LF++I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 251 --NPNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEA 304
PN V++ T++ ++ + A LF+ M NVV++NA++ + + +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 305 VKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVYNQM----PCKDIAAETALMSG 356
L M + + +++T +I+ +++VGKL EA+E+YN M D+ +L++G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 357 LIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----N 408
L G +DEA +MF + + + + ++I GFC+S R+++ + +F +M +K N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 409 SVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDALKSLV 464
++++ +I GY G+ D A+ +F M R +I ++N L+ G N AL
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL---- 418
Query: 465 LMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCG 524
+ EY+ K ++ +I K G
Sbjct: 419 -------------------------------MIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Query: 525 RVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTF 579
+VE A +F ++ ++I++ ++ISG+ G EA FK+M + +P++ +
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 148/298 (49%), Gaps = 33/298 (11%)
Query: 11 RGENHKIKMTSMKHKLTIGSIGGK-HVFNKNQQIIHLGKLGKVEEAVRVFSNT----IHK 65
R NH +++ + +G+ G + +V N + L ++G+ +A + + I
Sbjct: 202 RHLNHAVELFN-----QMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLF 121
N++T+ ++I F K GK+ +A++L++ M Q ++ ++ ++I G +++EA ++F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 122 DVMPERDNFS----WALMITCYTRKGKLEKARELLELVPDK---LDTACWNAVIAGYAKK 174
+M + + +I + + ++E ++ + K +T + +I GY
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 175 GQFSDAEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK----NVVSW 226
G+ A++VFN M + D+ +YN +L G NGK+ AL FE M ++ N+V++
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 227 NLMVSGFVNSGDLSSAR----QLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSM 280
+++ G G + A LF K PN +++ TM+ GF R G I EA LF M
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 113/258 (43%), Gaps = 19/258 (7%)
Query: 501 ILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECV----DLISWNSLISGYALNGY 556
++K G+ DL +L+ Y R+E A +F I + +++++ +LI N +
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 557 AIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYS 616
A + F QM + P+ VT+ +++ G L + M++ IEP ++
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVITFT 262
Query: 617 CLVDLLGRMGRLEEA---FNVVRGMDVKANAGLWGSLLGACRVHKNLEIGE--FAAMRLS 671
L+D ++G+L EA +NV+ M V + +GSL+ ++ L+ F M +
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 672 ELEPHNASNYITLSNMHAEAGRWEEVERLRVLMRDKRAGKLPGCSWIEVQNQIQCFLSDD 731
P N Y TL + ++ R E + +++ + G + V Q C +
Sbjct: 323 GCYP-NEVIYTTLIHGFCKSKRVE--DGMKIFYEMSQKGVVANTITYTVLIQGYCLVG-- 377
Query: 732 SGRLRPETIQIILNAISA 749
RP+ Q + N +S+
Sbjct: 378 ----RPDVAQEVFNQMSS 391
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 138/616 (22%), Positives = 256/616 (41%), Gaps = 84/616 (13%)
Query: 70 YNSMISVFAKNGKISDARQLFDKMSQ----RNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
Y +++ +++ GK A LF++M + LV++N ++ + M K+ V+
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD--VFGKMGRSWRKILGVLD 270
Query: 126 ER-------DNFSWALMITCYTRKGKLEKAREL---LELVPDKLDTACWNAVIAGYAKKG 175
E D F+ + +++ R+G L +A+E L+ + T +NA++ + K G
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 176 QFSDAEKVFNLMP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKMAEKNVVSWNLMVS 231
+++A V M D V+YN ++A Y + G A E M +K V+
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM------- 383
Query: 232 GFVNSGDLSSARQLFEKIPNPNAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVS 287
PNA+++ T++ + + GK EA +LF SM N +
Sbjct: 384 --------------------PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCT 423
Query: 288 WNAMIAAYAQDLQIDEAVKLFIKM------PHKDGVSWTTIINGYIRVGKLDEAREVYNQ 341
+NA+++ + + +E +K+ M P++ +W T++ G V+ +
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNR--ATWNTMLALCGNKGMDKFVNRVFRE 481
Query: 342 M------PCKDIAAETALMSGLIQTGRVDEASKMFNQLSTRD----TICWNSMIAGFCQS 391
M P +D L+S + G +ASKM+ +++ +N+++ +
Sbjct: 482 MKSCGFEPDRDTF--NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 392 GRMDEALDLFRQMP----KKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV-SWNSL 446
G ++ M K S++ M+ YA+ G E I ++E I SW L
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLL 599
Query: 447 ITGFLQN---SLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
T L N + ++ L + G KPD F + E I +
Sbjct: 600 RTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIEC----VDLISWNSLISGYALNGYAIE 559
G DL N+L+ MY + G AE++ +E DL+S+N++I G+ G E
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Query: 560 AFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVEDFAIEPLAEHYSCLV 619
A + +M + P T+ +S + G+ + D+ +CM ++ P + +V
Sbjct: 720 AVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN-DCRPNELTFKMVV 778
Query: 620 DLLGRMGRLEEAFNVV 635
D R G+ EA + V
Sbjct: 779 DGYCRAGKYSEAMDFV 794
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/480 (20%), Positives = 202/480 (42%), Gaps = 92/480 (19%)
Query: 68 VTYNSMISVFAKNGKISDARQLFDKMSQRNL----VSWNTMIAGYLHNSMVEEASKLFDV 123
VTYN+++ VF K G ++A + +M + + V++N ++A Y+ +EA+ + ++
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 124 MPER----DNFSWALMITCYTRKGKLEKA------------------------------- 148
M ++ + ++ +I Y + GK ++A
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 149 -RELLELVPDKLDTAC------WNAVIAGYAKKGQFSDAEKVFNLM------PVKDLVSY 195
E+++++ D C WN ++A KG +VF M P +D ++
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD--TF 494
Query: 196 NSMLAGYTQNGKMGLALHFFEKMAEKN----VVSWNLMVSGFVNSGDLSSARQLFEKIPN 251
N++++ Y + G A + +M V ++N +++ GD S + + +
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 252 ----PNAVSWVTMLCGFARHG----------KITEARRLFDSMPCKNVVSWNAMIAAYAQ 297
P S+ ML +A+ G +I E + M + ++ N A A
Sbjct: 555 KGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAG 614
Query: 298 DLQIDEAVKLFIKMPHK-DGVSWTTIINGYIRVGKLDEAREVYNQMP----CKDIAAETA 352
+ A LF K +K D V + ++++ + R D+A + + D+ +
Sbjct: 615 S---ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 353 LMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKKN 408
LM ++ G +A ++ L D + +N++I GFC+ G M EA+ + +M ++
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 409 ----SVSWNTMISGYAQAGQMDSAENIFQAMEER----NIVSWNSLITGFLQNSLYFDAL 460
++NT +SGY G E++ + M + N +++ ++ G+ + Y +A+
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 176/421 (41%), Gaps = 84/421 (19%)
Query: 63 IHKNLVTYNSMISVFAKNGKISDARQLFDKMSQ--------------------------- 95
+ N +TY ++I + K GK +A +LF M +
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 96 ------------RNLVSWNTMIAGYLHNSMVEEASKLFDVM------PERDNFSWALMIT 137
N +WNTM+A + M + +++F M P+RD F+ +I+
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN--TLIS 499
Query: 138 CYTRKGKLEKARELLELVPDKLDTAC---WNAVIAGYAKKGQFSDAEKVFNLMPVKDL-- 192
Y R G A ++ + AC +NA++ A+KG + E V + M K
Sbjct: 500 AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 193 --VSYNSMLAGYTQNGKMGLALHFFEKMAEKNVV--SW----NLMVSGFVNSGDLSSAR- 243
SY+ ML Y + G L + E ++ + SW L+++ F S R
Sbjct: 560 TETSYSLMLQCYAKGGNY-LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA 618
Query: 244 -QLFEKIP-NPNAVSWVTMLCGFARHGKITEARRLFDSMP----CKNVVSWNAMIAAYAQ 297
LF+K P+ V + +ML F R+ +A + +S+ ++V++N+++ Y +
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 298 DLQI---DEAVKLFIKMPHK-DGVSWTTIINGYIRVGKLDEAREVYNQM------PCKDI 347
+ +E +K K K D VS+ T+I G+ R G + EA + ++M PC I
Sbjct: 679 RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPC--I 736
Query: 348 AAETALMSGLIQTGRVDEASKMFNQLSTRDT----ICWNSMIAGFCQSGRMDEALDLFRQ 403
+SG G E + ++ D + + ++ G+C++G+ EA+D +
Sbjct: 737 FTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
Query: 404 M 404
+
Sbjct: 797 I 797
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 140/315 (44%), Gaps = 39/315 (12%)
Query: 69 TYNSMISVFAKNGKISDARQLFDKMSQRN----LVSWNTMIAGYLHNSMVEEASKLFDVM 124
T+N++IS + + G DA +++ +M++ + ++N ++ + M
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 125 PER----DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW---NAVIAGYAKKGQF 177
+ S++LM+ CY + G + + + W ++ K
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 178 SDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKMAE----KNVVSWNLM 229
+ +E+ F L D+V +NSML+ +T+N A E + E ++V++N +
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 230 VSGFVNSGDLSSARQLFEKIPN----PNAVSWVTMLCGFARHGKITEARRLFDSM----- 280
+ +V G+ A ++ + + P+ VS+ T++ GF R G + EA R+ M
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 281 -PCKNVVSWNAMIAAY---AQDLQIDEAVKLFIKMP-HKDGVSWTTIINGYIRVGKLDEA 335
PC + ++N ++ Y +I++ ++ K + +++ +++GY R GK EA
Sbjct: 733 RPC--IFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Query: 336 REVYNQM----PCKD 346
+ +++ PC D
Sbjct: 791 MDFVSKIKTFDPCFD 805
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 129/304 (42%), Gaps = 46/304 (15%)
Query: 366 ASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQM----PKKNSVSWNTMIS 417
A+K+ +++ + D + +++ + ++G+ ++A+DLF +M P V++N ++
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 418 GYAQAGQMDSAENIFQAMEERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQST 477
+ + G+ SW ++ G L D ++S +G K D+ T
Sbjct: 254 VFGKMGR-----------------SWRKIL-GVL------DEMRS------KGLKFDEFT 283
Query: 478 FXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFTAIE 537
+ + + GY NAL+ ++ K G A V +E
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 538 ---C-VDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLAN 593
C D +++N L++ Y G++ EA + M + V+P+ +T+ ++ A AG +
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 594 QGLDLFKCMVEDFAIEPLAEHYSCLVDLLGRMGRLEEAFNVVRGMD---VKANAGLWGSL 650
+ L LF M E + P Y+ ++ LLG+ R E ++ M N W ++
Sbjct: 404 EALKLFYSMKEAGCV-PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 651 LGAC 654
L C
Sbjct: 463 LALC 466
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 223/446 (50%), Gaps = 52/446 (11%)
Query: 33 GKHVFNKNQQIIHLGKLGKVEEAVRVFSNT----IHKNLVTYNSMISVFAKNG-KISDAR 87
G V+ + I G+ G EEA+ VF++ + NLVTYN++I K G +
Sbjct: 265 GNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA 324
Query: 88 QLFDKMS----QRNLVSWNTMIAGYLHNSMVEEASKLFDVMP----ERDNFSWALMITCY 139
+ FD+M Q + +++N+++A + E A LFD M E+D FS+ ++
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 140 TRKGKLEKARELLELVPDKL---DTACWNAVIAGYAKKGQFSDAEKVFNLMP----VKDL 192
+ G+++ A E+L +P K + ++ VI G+AK G+F +A +F M D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 193 VSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGDLSSARQLFEK 248
VSYN++L+ YT+ G+ AL +MA +K+VV++N ++ G+ G +++F +
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 249 IPN----PNAVSWVTMLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQ 300
+ PN +++ T++ G+++ G EA +F +VV ++A+I A ++
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 301 IDEAVKLFIKMPHKDGVS-----WTTIINGYIRVGKLDEAREVYNQMPCKDIAAETALMS 355
+ AV L +M K+G+S + +II+ + R +D + + N + ++ +S
Sbjct: 565 VGSAVSLIDEMT-KEGISPNVVTYNSIIDAFGRSATMDRSADYSN---GGSLPFSSSALS 620
Query: 356 GLIQTGRVDEASKMFNQLSTRDTICWNSMIAGFCQSGRMDEA--LDLFRQMP----KKNS 409
L +T + ++F QL+T N+ C+ G + + L++FR+M K N
Sbjct: 621 ALTET-EGNRVIQLFGQLTTES----NNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNV 675
Query: 410 VSWNTMISGYAQAGQMDSAENIFQAM 435
V+++ +++ ++ + A + + +
Sbjct: 676 VTFSAILNACSRCNSFEDASMLLEEL 701
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 194/396 (48%), Gaps = 63/396 (15%)
Query: 71 NSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMPERDNF 130
++MIS + GK++ A+++F+ T AG N++ +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFE-----------TAFAGGYGNTV----------------Y 269
Query: 131 SWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAVIAGYAKKG-QFSDAEKVFNL 186
+++ +I+ Y R G E+A + + + + + +NAVI K G +F K F+
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 187 MP----VKDLVSYNSMLAGYTQNGKMGLALHFFEKMA----EKNVVSWNLMVSGFVNSGD 238
M D +++NS+LA ++ G A + F++M E++V S+N ++ G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 239 LSSARQLFEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCKNV----VSWNA 290
+ A ++ ++P PN VS+ T++ GFA+ G+ EA LF M + VS+N
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 291 MIAAYAQDLQIDEAVKLFIKMP----HKDGVSWTTIINGYIRVGKLDEAREVYNQMP--- 343
+++ Y + + +EA+ + +M KD V++ ++ GY + GK DE ++V+ +M
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 344 -CKDIAAETALMSGLIQTGRVDEASKMFNQLST----RDTICWNSMIAGFCQSGRMDEAL 398
++ + L+ G + G EA ++F + + D + ++++I C++G + A+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 399 DLFRQMPKK----NSVSWNTMISGYAQAGQMDSAEN 430
L +M K+ N V++N++I + ++ MD + +
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 222/471 (47%), Gaps = 69/471 (14%)
Query: 165 NAVIAGYAKKGQFSDAEKVFNLMPV----KDLVSYNSMLAGYTQNGKMGLALHFFEKMAE 220
+A+I+ + G+ + A+++F + +++++++ Y ++G A+ F M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 221 ----KNVVSWNLMVSGFVNSG-DLSSARQLFEKIP----NPNAVSWVTMLCGFARHGKIT 271
N+V++N ++ G + + F+++ P+ +++ ++L +R G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 272 EARRLFDSMPCK----NVVSWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTII 323
AR LFD M + +V S+N ++ A + Q+D A ++ +MP K + VS++T+I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 324 NGYIRVGKLDEAREVYNQMPCKDIAAE----TALMSGLIQTGRVDEASKMFNQLST---- 375
+G+ + G+ DEA ++ +M IA + L+S + GR +EA + ++++
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 376 RDTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENI 431
+D + +N+++ G+ + G+ DE +F +M ++ N ++++T+I GY++ G A I
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 432 FQAME----ERNIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXX 487
F+ + ++V +++LI +N L A+ + M +EG P+ T+
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 488 XXXXQVGNQLHEYILKSGYIND---LFVSNALIAMYAK--------CGRVESAEQVFTAI 536
+ Y N F S+AL A+ G++ + T
Sbjct: 597 SATMD---------RSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTK 647
Query: 537 ECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACS 587
+C + + S I +E F+ Q+ E+ P+ VTF +L+ACS
Sbjct: 648 DCEEGMQELSCI---------LEVFRKMHQL---EIKPNVVTFSAILNACS 686
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 209/466 (44%), Gaps = 55/466 (11%)
Query: 260 MLCGFARHGKITEARRLFDSMPC----KNVVSWNAMIAAYAQDLQIDEAVKLFIKMP--- 312
M+ R+GK+T A+R+F++ V +++A+I+AY + +EA+ +F M
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 313 -HKDGVSWTTIINGYIRVG-KLDEAREVYNQMPCKDIAAETALMSGLI----QTGRVDEA 366
+ V++ +I+ + G + + + +++M + + + L+ + G + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 367 SKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISG 418
+F++++ R D +N+++ C+ G+MD A ++ QMP K N VS++T+I G
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 419 YAQAGQMDSAENIFQAMEERNI----VSWNSLITGFLQNSLYFDALKSLVLMGREGKKPD 474
+A+AG+ D A N+F M I VS+N+L++ + + +AL L M G K D
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 475 QSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT 534
T+ ++ + + + +L + LI Y+K G + A ++F
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 535 AIECV----DLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAG 590
+ D++ +++LI NG A +M E + P+ VT+ ++ A +
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Query: 591 LANQGLDLFKCMVEDF---AIEPLAE-HYSCLVDLLGRM--------------GRLE--- 629
++ D F A+ L E + ++ L G++ G E
Sbjct: 599 TMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSC 658
Query: 630 --EAFNVVRGMDVKANAGLWGSLLGACRVHKNLEIGEFAAMRLSEL 673
E F + +++K N + ++L AC + E A+M L EL
Sbjct: 659 ILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFED---ASMLLEEL 701
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 135/625 (21%), Positives = 269/625 (43%), Gaps = 134/625 (21%)
Query: 11 RGENHKIKMTSMKHKLTIGSIGGKHVFNKNQQIIHLGKLGKVEEAVRVFSNTIH-----K 65
R EN K+ ++ H L H + ++ G + +AV ++ +
Sbjct: 126 RNENVKLTHEALSHVL--------HAYAES---------GSLSKAVEIYDYVVELYDSVP 168
Query: 66 NLVTYNSMISVFAKNGKISDARQLFDKMSQRNLVSWNTMIAGYLHNSMVEEASKLFDVMP 125
+++ NS++S+ K+ ++ DAR+++D+M R
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRG---------------------------D 201
Query: 126 ERDNFSWALMITCYTRKGKLEKARELLE------LVPDKLDTACWNAVIAGYAKKGQFSD 179
DN+S +++ +GK+E R+L+E +P + +N +I GY K G +
Sbjct: 202 SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIP---NIVFYNTIIGGYCKLGDIEN 258
Query: 180 AEKVFNLMPVK----DLVSYNSMLAGYTQNGKMGLALHFFEKMAEK--NVVSW---NLMV 230
A VF + +K L ++ +M+ G+ + G + ++ E+ V W N++
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
Query: 231 SGFVNSGDLSSARQLFEKIPN---PNAVSWVTMLCGFARHGKITEARRLFDSMPCKNVV- 286
+ + + + A + I N P+ ++ ++ + GK A D K ++
Sbjct: 319 AKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378
Query: 287 ---SWNAMIAAYAQDLQIDEAVKLFIKMPHK----DGVSWTTIINGYIRVGKLDEAREVY 339
S+ +I AY + + D A KL ++M + D V++ +I+G + G +D+A +
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 340 NQMPCKDIAAETA----LMSGLIQTGRVDEASKMFNQLSTR----DTICWNSMIAGFCQS 391
++ + ++ + A LMSGL +TGR A +F+++ R D + ++I GF +S
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498
Query: 392 GRMDEALDLF----RQMPKKNSVSWNTMISGYAQAGQMDSAENIFQAMEERNIV----SW 443
G DEA +F + K + V N MI G+ ++G +D A M E ++V ++
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTY 558
Query: 444 NSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILK 503
+++I G+++ A+K M + KP+ T+
Sbjct: 559 STIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY------------------------- 593
Query: 504 SGYINDLFVSNALIAMYAKCGRVESAEQVFTAIECVDL----ISWNSLISGYALNGYAIE 559
+LI + G + AE+ F ++ DL +++ +LI A +E
Sbjct: 594 ----------TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 560 -AFKAFKQMLSEEVVPDQVTFIGML 583
A ++ M++ + VP++VTF +L
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLL 668
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/530 (21%), Positives = 223/530 (42%), Gaps = 64/530 (12%)
Query: 158 KLDTACWNAVIAGYAKKGQFSDAEKVFNLM-----PVKDLVSYNSMLAGYTQNGKMGLAL 212
KL + V+ YA+ G S A ++++ + V D+++ NS+L+ ++ ++G A
Sbjct: 131 KLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDAR 190
Query: 213 HFFEKMAEK----NVVSWNLMVSGFVNSGDLSSARQLFE----KIPNPNAVSWVTMLCGF 264
+++M ++ + S ++V G N G + R+L E K PN V + T++ G+
Sbjct: 191 KVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGY 250
Query: 265 ARHGKITEARRLFDSMPCKNVVSWNAMIAAYAQDLQIDEAVKLFIKMPHKDGVSWTTIIN 324
+ G I A +F + K MP + ++ T+IN
Sbjct: 251 CKLGDIENAYLVFKELKLKGF-------------------------MPTLE--TFGTMIN 283
Query: 325 GYIRVGKLDEAREVYNQMPCKDIAAETALMSGLIQTG-----RVDEASKM---FNQLSTR 376
G+ + G + + +++ + + ++ +I +VD A +
Sbjct: 284 GFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKP 343
Query: 377 DTICWNSMIAGFCQSGRMDEALDLFRQMPKK----NSVSWNTMISGYAQAGQMDSAENIF 432
D +N +I C+ G+ + A+ + KK N++S+ +I Y ++ + D A +
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 433 QAMEER----NIVSWNSLITGFLQNSLYFDALKSLVLMGREGKKPDQSTFXXXXXXXXXX 488
M ER +IV++ LI G + + DA+ V + G PD + +
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 489 XXXQVGNQLHEYILKSGYINDLFVSNALIAMYAKCGRVESAEQVFT-AIEC---VDLISW 544
L +L + D +V LI + + G + A +VF+ ++E VD++
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 545 NSLISGYALNGYAIEAFKAFKQMLSEEVVPDQVTFIGMLSACSHAGLANQGLDLFKCMVE 604
N++I G+ +G EA +M E +VPD+ T+ ++ + +F+ M E
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM-E 582
Query: 605 DFAIEPLAEHYSCLVD---LLGRMGRLEEAFNVVRGMDVKANAGLWGSLL 651
+P Y+ L++ G EE F ++ D+ N + +L+
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 214/505 (42%), Gaps = 73/505 (14%)
Query: 139 YTRKGKLEKARELLELVPDKLDT-----ACWNAVIAGYAKKGQFSDAEKVFNLMPVK--- 190
Y G L KA E+ + V + D+ AC N++++ K + DA KV++ M +
Sbjct: 144 YAESGSLSKAVEIYDYVVELYDSVPDVIAC-NSLLSLLVKSRRLGDARKVYDEMCDRGDS 202
Query: 191 -DLVSYNSMLAGYTQNGKMGLALHFFE----KMAEKNVVSWNLMVSGFVNSGDLSSARQL 245
D S ++ G GK+ + E K N+V +N ++ G+ GD+ +A +
Sbjct: 203 VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLV 262
Query: 246 FEKIP----NPNAVSWVTMLCGFARHGKITEARRLFDSMPCK--NVVSW---NAMIAAYA 296
F+++ P ++ TM+ GF + G + RL + + V W N + A Y
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322
Query: 297 QDLQID--EAVKLFIKMPHK-DGVSWTTIINGYIRVGKLDEAREVYNQMPCKDIAAETAL 353
++D E++ I K D ++ +IN + GK + A ++ K +
Sbjct: 323 HGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLS 382
Query: 354 MSGLIQ----TGRVDEASKMFNQLSTR----DTICWNSMIAGFCQSGRMDEALDLFRQMP 405
+ LIQ + D ASK+ Q++ R D + + +I G SG MD+A+++ ++
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 406 KK----NSVSWNTMISGYAQAGQMDSAENIFQAMEERNIVS----WNSLITGFLQNSLYF 457
+ ++ +N ++SG + G+ A+ +F M +RNI+ + +LI GF+++ +
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 458 DALKSLVLMGREGKKPDQSTFXXXXXXXXXXXXXQVGNQLHEYILKSGYINDLFVSNALI 517
+A K L +G K D +H + G+ + AL
Sbjct: 503 EARKVFSLSVEKGVKVDV---------------------VHHNAMIKGFCRSGMLDEALA 541
Query: 518 AMYAKCGRVESAEQVFTAIECVDLISWNSLISGYALNGYAIEAFKAFKQMLSEEVVPDQV 577
M R+ V D +++++I GY A K F+ M + P+ V
Sbjct: 542 CM----NRMNEEHLV------PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 578 TFIGMLSACSHAGLANQGLDLFKCM 602
T+ +++ G + FK M
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEM 616