Miyakogusa Predicted Gene

Lj2g3v1647760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1647760.1 Non Chatacterized Hit- tr|O81807|O81807_ARATH
Putative uncharacterized protein AT4g35760
OS=Arabidop,41.09,0.000000000000005,seg,NULL; VKOR,Vitamin K epoxide
reductase; no description,Vitamin K epoxide reductase,CUFF.37594.1
         (348 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G35760.1 | Symbols:  | NAD(P)H dehydrogenase (quinone)s | chr...   322   2e-88

>AT4G35760.1 | Symbols:  | NAD(P)H dehydrogenase (quinone)s |
           chr4:16942733-16944622 REVERSE LENGTH=376
          Length = 376

 Score =  322 bits (826), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 154/285 (54%), Positives = 198/285 (69%)

Query: 57  YNLLAGIAGTGFLETSYLTYLKLTGADAFCPVGGGTCSDILNSDYALVFGVPLPLIGMGA 116
           YN   GI G G L+T+YLTYLK+TG+DAFCP+GGGTC D+LNSDYA+VFGVPLP+IG   
Sbjct: 80  YNWYTGIGGIGMLDTAYLTYLKVTGSDAFCPIGGGTCGDVLNSDYAVVFGVPLPVIGFVM 139

Query: 117 YGFVAALSLQLATKKFPFGIDKSNAQLVLLGTTTSMAAASAYXXXXXXXXXXXXXXXXXX 176
           YG V ALS +L     PFGI KSN +  L G TT+MA+ASAY                  
Sbjct: 140 YGVVTALSAELGEGNLPFGISKSNGRFALFGITTAMASASAYFLYILSTKLSGSSCLYCL 199

Query: 177 XXXXXXXXXXXXXXKEHGLRETYKQLGLQLFVASLVILTLNTXXXXXXXXXXXXXKIELP 236
                         K+  L+E  + +GLQ+ +A +V+ +L                IELP
Sbjct: 200 VSAFLSFSLFFLSVKDVKLQEIQQVVGLQICLAIIVVASLTASYSTAQPIPSRSGDIELP 259

Query: 237 YYATEITTPSSPFALSLARYLHSIGAKMYGAFWCSHCLEQKEMFGREAFKQLDYVECFPE 296
           Y+ TEI++ SSP+A++LA++L+SIGAKMYGAFWCSHCLEQKEMFGREA K+L+YVECFP+
Sbjct: 260 YFRTEISSSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKELNYVECFPD 319

Query: 297 GYRTGTKMLESCIDAKIEGFPTWIINGQVLSGEVELSELAQVSGY 341
           GY+ GTK+L++C DA IEGFPTWIIN +VLSGE+EL+ELA+++G+
Sbjct: 320 GYKKGTKILKACADAAIEGFPTWIINDKVLSGEIELAELAEMTGF 364