Miyakogusa Predicted Gene
- Lj2g3v1645400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1645400.1 Non Chatacterized Hit- tr|I1LI97|I1LI97_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,81.23,0,CYCLINS,Cyclin, N-terminal; Cyclin-like,Cyclin-like;
seg,NULL; domain present in cyclins, TFIIB and ,CUFF.37574.1
(383 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137... 380 e-105
AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 | chr4:16901744-169... 372 e-103
AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666... 368 e-102
AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 | chr1:28628046-286... 361 e-100
AT1G20590.1 | Symbols: | Cyclin family protein | chr1:7131166-7... 228 6e-60
AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 | chr3:362547... 226 2e-59
AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 | chr2:11401551-114... 226 3e-59
AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein ... 224 7e-59
AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 | chr4... 223 2e-58
AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587... 218 5e-57
AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817... 176 2e-44
AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 | ... 174 9e-44
AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like cy... 172 4e-43
AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365... 167 1e-41
AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 | chr1:30214694-302... 166 2e-41
AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-167... 166 2e-41
AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 163 1e-40
AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 | chr5:17293227-172... 159 3e-39
AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 150 1e-36
AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 | chr1:17303676-173... 149 3e-36
AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 146 2e-35
AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 | chr1:125951... 126 2e-29
AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 | chr1:12595110-125... 126 2e-29
AT1G14750.1 | Symbols: SDS | Cyclin family protein | chr1:507967... 89 5e-18
AT1G14750.2 | Symbols: SDS | Cyclin family protein | chr1:507967... 88 1e-17
AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 83 3e-16
AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 | chr1:2... 60 2e-09
AT1G35440.1 | Symbols: CYCT1;1 | cyclin T1;1 | chr1:13035294-130... 58 1e-08
AT2G22490.2 | Symbols: CYCD2;1 | Cyclin D2;1 | chr2:9554157-9555... 55 9e-08
AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | Cyclin D2;1 | chr2:9... 55 9e-08
AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 | chr4:17679497-176... 55 1e-07
AT4G37630.1 | Symbols: CYCD5;1 | cyclin d5;1 | chr4:17679497-176... 54 1e-07
AT5G02110.1 | Symbols: CYCD7;1, CYCD7 | CYCLIN D7;1 | chr5:41708... 53 4e-07
AT5G67260.1 | Symbols: CYCD3;2 | CYCLIN D3;2 | chr5:26836313-268... 50 3e-06
AT5G65420.3 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 49 6e-06
AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 49 6e-06
AT4G34160.1 | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 | chr4:16357... 49 6e-06
AT3G50070.1 | Symbols: CYCD3;3 | CYCLIN D3;3 | chr3:18565322-185... 49 8e-06
>AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137273
REVERSE LENGTH=429
Length = 429
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/392 (51%), Positives = 256/392 (65%), Gaps = 16/392 (4%)
Query: 1 MVISDENA---SSNNSLKPASFQDCVGGARKVGQNRRALGVINQSLVEGRPYPCVVNKRA 57
MV SDEN+ + SL+ + G RRAL IN+++ E YP VNKR+
Sbjct: 1 MVRSDENSLGLIGSMSLQGGGVVGKIKTTATTGPTRRALSTINKNITEAPSYPYAVNKRS 60
Query: 58 LSGKIDVCVKKQADPVHRPITRRFXXXXXXXXXXXXXEETKKSNLTVGNSNGFGECIFVD 117
+S + +C K PVHRP+TR+F EETKK + S+ E I +D
Sbjct: 61 VSERDGICNKP---PVHRPVTRKFAAQLADHKPHIRDEETKKPDSV---SSEEPETIIID 114
Query: 118 -DELKPE--DQPVPMSLEQTV----HSESDQXXXXXXXXXXXXXXXXXXXAGDANNPLAV 170
DE E D PM ++ T E + A D NNPLA
Sbjct: 115 VDESDKEGGDSNEPMFVQHTEAMLEEIEQMEKEIEMEDADKEEEPVIDIDACDKNNPLAA 174
Query: 171 TDYIEGLYSYYRKIESTGCVSPNYMTQQCDINERMRAILIDWLIEVHDKFDLMHETLFLT 230
+YI ++++Y+ E CV PNYM Q D+NERMR ILIDWLIEVH KF+LM ETL+LT
Sbjct: 175 VEYIHDMHTFYKNFEKLSCVPPNYMDNQQDLNERMRGILIDWLIEVHYKFELMEETLYLT 234
Query: 231 VNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYSRKEVLEME 290
+N+IDRFL +VRKKLQLVG+ A+LLACKYEEVSVPVV DLILISDKAYSR+EVL+ME
Sbjct: 235 INVIDRFLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDME 294
Query: 291 KLMVNTLEFNMSVPTAYVFMRRFLKAAQADRKLELLAFFLVELSLVEYEMLKFPPSHIAA 350
KLM NTL+FN S+PT YVFM+RFLKAAQ+D+KLE+L+FF++EL LVEYEML++ PS +AA
Sbjct: 295 KLMANTLQFNFSLPTPYVFMKRFLKAAQSDKKLEILSFFMIELCLVEYEMLEYLPSKLAA 354
Query: 351 AAVYTAQCAIYGFKQWCKTCEWHTNYSEDQLL 382
+A+YTAQC + GF++W KTCE+HT Y+E QLL
Sbjct: 355 SAIYTAQCTLKGFEEWSKTCEFHTGYNEKQLL 386
>AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 |
chr4:16901744-16903766 FORWARD LENGTH=429
Length = 429
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/400 (55%), Positives = 278/400 (69%), Gaps = 35/400 (8%)
Query: 1 MVISDENASSNNSLKPAS--FQDCVGGARKVG-----QNRRALGVINQSLVEGRPYPCVV 53
MV +EN + N +KP + QD +RK G QNRRALGVIN +LV + YPCVV
Sbjct: 1 MVNPEEN-NRNLVVKPITEILQDDDKRSRKFGVEMKRQNRRALGVINHNLVGAKAYPCVV 59
Query: 54 NKR-ALSG-KIDVCVKKQADPVHRPITRRFXXXXXXXXXXXXXEETKKSNLTVGNSNGFG 111
NKR LS K + C KK+ D +H I+R EETKK + N FG
Sbjct: 60 NKRRGLSQRKQESCDKKKLDSLHPSISR-------------SQEETKKLK---PSGNEFG 103
Query: 112 ECIFVDDELKPE-----DQPVPMSLEQTVHSESD---QXXXXXXXXXXXXXXXXXXXAGD 163
+CIF+D+E + DQP+PMSLE+ + E D + D
Sbjct: 104 DCIFIDEEEEKNEEVTLDQPMPMSLEEP-YIEFDPMEEEVEMEDMEEEQEEPVLDIDEYD 162
Query: 164 ANNPLAVTDYIEGLYSYYRKIESTGCVSPNYMTQQCDINERMRAILIDWLIEVHDKFDLM 223
ANN LA +Y++ LY +YRK E CV +YM QQ DI+++MRAILIDWLIEVHDKF+LM
Sbjct: 163 ANNSLAAVEYVQDLYDFYRKTERFSCVPLDYMAQQFDISDKMRAILIDWLIEVHDKFELM 222
Query: 224 HETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYSR 283
+ETLFLTVNLIDRFL KQ V RKKLQLVGLVA+LLACKYEEVSVP+V DL++ISDKAY+R
Sbjct: 223 NETLFLTVNLIDRFLSKQAVARKKLQLVGLVALLLACKYEEVSVPIVEDLVVISDKAYTR 282
Query: 284 KEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQADRKLELLAFFLVELSLVEYEMLKF 343
+VLEMEK+M++TL+FNMS+PT Y F++RFLKAAQ+D+KLE+LA FL+EL+LV+YEM+++
Sbjct: 283 TDVLEMEKIMLSTLQFNMSLPTQYPFLKRFLKAAQSDKKLEILASFLIELALVDYEMVRY 342
Query: 344 PPSHIAAAAVYTAQCAIYGFKQWCKTCEWHTNYSEDQLLE 383
PPS +AA AVYTAQC I+GF +W TCE+H +YSE+QLLE
Sbjct: 343 PPSLLAATAVYTAQCTIHGFSEWNSTCEFHCHYSENQLLE 382
>AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666261
FORWARD LENGTH=429
Length = 429
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/368 (55%), Positives = 258/368 (70%), Gaps = 21/368 (5%)
Query: 26 ARKVGQ-----NRRALGVINQSLVEGRPYPCVVNKRA--LSGKIDV---CVKKQADPVHR 75
+RK GQ RR L VINQ+L R YPCVVNKR LS K + C KK+ D +
Sbjct: 25 SRKFGQEMKREKRRVLRVINQNLAGARVYPCVVNKRGSLLSNKQEEEEGCQKKKFDSLRP 84
Query: 76 PITRRFXXXXXXXXXXXXXEETKKSNLTVGNSNGFGECIFVDDELKPEDQPVPMSLEQTV 135
+TR E KK +V ++N FG+CIF+D+E D P+PMSLE+
Sbjct: 85 SVTR----------SGVEEETNKKLKPSVPSANDFGDCIFIDEEEATLDLPMPMSLEKP- 133
Query: 136 HSESDQXXXXXXXXXXXXXXXXXXXAGDANNPLAVTDYIEGLYSYYRKIESTGCVSPNYM 195
+ E+D D+ N LA +Y++ LY++YR +E CV +YM
Sbjct: 134 YIEADPMEEVEMEDVTVEEPIVDIDVLDSKNSLAAVEYVQDLYAFYRTMERFSCVPVDYM 193
Query: 196 TQQCDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVA 255
QQ D+NE+MRAILIDWLIEVHDKFDL++ETLFLTVNLIDRFL KQ V+RKKLQLVGLVA
Sbjct: 194 MQQIDLNEKMRAILIDWLIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVGLVA 253
Query: 256 MLLACKYEEVSVPVVGDLILISDKAYSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLK 315
+LLACKYEEVSVPVV DL+LISDKAY+R +VLEMEK M++TL+FN+S+PT Y F++RFLK
Sbjct: 254 LLLACKYEEVSVPVVEDLVLISDKAYTRNDVLEMEKTMLSTLQFNISLPTQYPFLKRFLK 313
Query: 316 AAQADRKLELLAFFLVELSLVEYEMLKFPPSHIAAAAVYTAQCAIYGFKQWCKTCEWHTN 375
AAQAD+K E+LA FL+EL+LVEYEML+FPPS +AA +VYTAQC + G ++W TCE+H +
Sbjct: 314 AAQADKKCEVLASFLIELALVEYEMLRFPPSLLAATSVYTAQCTLDGSRKWNSTCEFHCH 373
Query: 376 YSEDQLLE 383
YSEDQL+E
Sbjct: 374 YSEDQLME 381
>AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 |
chr1:28628046-28630199 REVERSE LENGTH=431
Length = 431
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/393 (51%), Positives = 254/393 (64%), Gaps = 21/393 (5%)
Query: 4 SDENASSNNSLKPASFQDCVGGAR--KV----GQNRRALGVINQSLVEGRPYPCVVNKRA 57
SDEN + + P + Q GG R KV GQ RRAL IN++++ YPC V KR
Sbjct: 4 SDEN--RHGVIGPMNRQQ--GGLRGGKVIPTNGQTRRALSNINKNIIGAPVYPCAV-KRP 58
Query: 58 LSGKIDVCVKKQAD-PVHRPITRRFXXXXXXXXXXXXXEETKKSNLTVGNSNGFGECIFV 116
+ K +C KK PVHRP+TR+F EETKK +L SN + I
Sbjct: 59 FTEKNGICNKKIPPVPVHRPVTRKFAAQLAENNLQIHKEETKKPDLI---SNEALDRIIT 115
Query: 117 DDELKPEDQPVPMS-----LEQTVHSESDQXXXXXXXXXXXXXXXXXXXAGDANNPLAVT 171
D E ++P+ + LE+ E + + D NNPL+V
Sbjct: 116 DVEEGDFNEPMFVQHTEAMLEEIDKMEGIEMQDSNDIDAEVEESVMDIDSCDKNNPLSVV 175
Query: 172 DYIEGLYSYYRKIESTGCVSPNYMTQQCDINERMRAILIDWLIEVHDKFDLMHETLFLTV 231
+YI +Y +Y+K E CV PNYM Q DINERMR IL DWLIEVH KF+LM ETL+LT+
Sbjct: 176 EYINDIYCFYKKNECRSCVPPNYMENQHDINERMRGILFDWLIEVHYKFELMEETLYLTI 235
Query: 232 NLIDRFLE-KQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYSRKEVLEME 290
NLIDRFL Q + RKKLQLVG+ AMLLACKYEEVSVPVV DLILISDKAY+R E+L+ME
Sbjct: 236 NLIDRFLAVHQHIARKKLQLVGVTAMLLACKYEEVSVPVVDDLILISDKAYTRTEILDME 295
Query: 291 KLMVNTLEFNMSVPTAYVFMRRFLKAAQADRKLELLAFFLVELSLVEYEMLKFPPSHIAA 350
KLM NTL+FN +PT YVFMRRFLKAAQ+D+KLELL+FF++EL LVEYEML++ PS +AA
Sbjct: 296 KLMANTLQFNFCLPTPYVFMRRFLKAAQSDKKLELLSFFMIELCLVEYEMLQYTPSQLAA 355
Query: 351 AAVYTAQCAIYGFKQWCKTCEWHTNYSEDQLLE 383
+A+YTAQ + G++ W KT E+H+ Y+E+ LLE
Sbjct: 356 SAIYTAQSTLKGYEDWSKTSEFHSGYTEEALLE 388
>AT1G20590.1 | Symbols: | Cyclin family protein |
chr1:7131166-7132183 REVERSE LENGTH=199
Length = 199
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 105/146 (71%), Positives = 130/146 (89%)
Query: 237 FLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYSRKEVLEMEKLMVNT 296
FL +VRKKLQLVG+ A+LLACKYEEVSVPVV DLILISDKAYSR+EVL+MEKLM NT
Sbjct: 3 FLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANT 62
Query: 297 LEFNMSVPTAYVFMRRFLKAAQADRKLELLAFFLVELSLVEYEMLKFPPSHIAAAAVYTA 356
L+FN S+PT YVFM+RFLKAAQ+D+KLE+L+FF++EL LVEYEML++ PS +AA+A+YTA
Sbjct: 63 LQFNFSLPTPYVFMKRFLKAAQSDKKLEILSFFMIELCLVEYEMLEYLPSKLAASAIYTA 122
Query: 357 QCAIYGFKQWCKTCEWHTNYSEDQLL 382
QC + GF++W KTCE+HT Y+E+QLL
Sbjct: 123 QCTLKGFEEWSKTCEFHTGYNEEQLL 148
>AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 |
chr3:3625475-3627139 REVERSE LENGTH=414
Length = 414
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 160/222 (72%), Gaps = 3/222 (1%)
Query: 163 DANNPLAVTDYIEGLYSYYRKIESTGCVSPN-YMTQQCDINERMRAILIDWLIEVHDKFD 221
D N LA +Y+E +Y +Y+++ + P YM Q +I+E+MR+ILIDWL+EVH KFD
Sbjct: 149 DKENDLAAVEYVEDMYIFYKEVVNES--KPQMYMHTQPEIDEKMRSILIDWLVEVHVKFD 206
Query: 222 LMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAY 281
L ETL+LTVN+IDRFL +TV R++LQLVG+ A+L+A KYEE+ P V DL+ ++D +Y
Sbjct: 207 LSPETLYLTVNIIDRFLSLKTVPRRELQLVGVSALLIASKYEEIWPPQVNDLVYVTDNSY 266
Query: 282 SRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQADRKLELLAFFLVELSLVEYEML 341
+ +++L MEK ++ LE+ ++VPT YVF+ RF+KA+ +D+KLE L FL EL L+ ++ L
Sbjct: 267 NSRQILVMEKTILGNLEWYLTVPTQYVFLVRFIKASGSDQKLENLVHFLAELGLMHHDSL 326
Query: 342 KFPPSHIAAAAVYTAQCAIYGFKQWCKTCEWHTNYSEDQLLE 383
F PS +AA+AVYTA+C + W T ++HT YSE QL++
Sbjct: 327 MFCPSMLAASAVYTARCCLNKTPTWTDTLKFHTGYSESQLMD 368
>AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 |
chr2:11401551-11403205 FORWARD LENGTH=387
Length = 387
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 162/225 (72%), Gaps = 3/225 (1%)
Query: 161 AGDANNPLAVTDYIEGLYSYYRKIESTGCVSPNYMTQQCDINERMRAILIDWLIEVHDKF 220
A DANN LA +Y+E ++ +YR +E G + +Y+ Q +INE+MR+ILIDWL++VH KF
Sbjct: 118 AVDANNELAAVEYVEDIFKFYRTVEEEGGIK-DYIGSQPEINEKMRSILIDWLVDVHRKF 176
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKA 280
+LM ETL+LT+NL+DRFL V R++LQL+GL AML+ACKYEE+ P V D + ISD A
Sbjct: 177 ELMPETLYLTINLVDRFLSLTMVHRRELQLLGLGAMLIACKYEEIWAPEVNDFVCISDNA 236
Query: 281 YSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAA-QADRKLELLAFFLVELSLVEYE 339
Y+RK+VL MEK ++ +E+ ++VPT YVF+ R++KAA D ++E L F+L EL L++Y
Sbjct: 237 YNRKQVLAMEKSILGQVEWYITVPTPYVFLARYVKAAVPCDAEMEKLVFYLAELGLMQYP 296
Query: 340 MLKF-PPSHIAAAAVYTAQCAIYGFKQWCKTCEWHTNYSEDQLLE 383
++ PS +AA+AVY A+ + W +T + HT YSED+++E
Sbjct: 297 IVVLNRPSMLAASAVYAARQILKKTPFWTETLKHHTGYSEDEIME 341
>AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein |
chr5:1859542-1861570 REVERSE LENGTH=445
Length = 445
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 161/223 (72%), Gaps = 3/223 (1%)
Query: 162 GDANNPLAVTDYIEGLYSYYRKIESTGCVSPN-YMTQQCDINERMRAILIDWLIEVHDKF 220
D +N LA +Y++ +YS+Y+++E P YM Q ++NE+MRAILIDWL+EVH KF
Sbjct: 171 SDKDNHLAAVEYVDDMYSFYKEVEKES--QPKMYMHIQTEMNEKMRAILIDWLLEVHIKF 228
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKA 280
+L ETL+LTVN+IDRFL + V +++LQLVG+ A+L+A KYEE+ P V DL+ ++D A
Sbjct: 229 ELNLETLYLTVNIIDRFLSVKAVPKRELQLVGISALLIASKYEEIWPPQVNDLVYVTDNA 288
Query: 281 YSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQADRKLELLAFFLVELSLVEYEM 340
YS +++L MEK ++ LE+ ++VPT YVF+ RF+KA+ +D ++E + FL EL ++ Y+
Sbjct: 289 YSSRQILVMEKAILGNLEWYLTVPTQYVFLVRFIKASMSDPEMENMVHFLAELGMMHYDT 348
Query: 341 LKFPPSHIAAAAVYTAQCAIYGFKQWCKTCEWHTNYSEDQLLE 383
L F PS +AA+AVYTA+C++ W T ++HT Y+E ++++
Sbjct: 349 LTFCPSMLAASAVYTARCSLNKSPAWTDTLQFHTGYTESEIMD 391
>AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 |
chr4:17622129-17624208 REVERSE LENGTH=428
Length = 428
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/224 (47%), Positives = 159/224 (70%), Gaps = 2/224 (0%)
Query: 161 AGDANNPLAVTDYIEGLYSYYRKIESTGCVSPNYMTQQCDINERMRAILIDWLIEVHDKF 220
+ D N LA +Y+E +YS+Y+ +ES +YM Q DINE+MR IL++WLI+VH +F
Sbjct: 153 SADVENDLAAVEYVEDIYSFYKSVESE-WRPRDYMASQPDINEKMRLILVEWLIDVHVRF 211
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKA 280
+L ET +LTVN++DRFL + V RK+LQLVGL A+L++ KYEE+ P V DL+ I+D A
Sbjct: 212 ELNPETFYLTVNILDRFLSVKPVPRKELQLVGLSALLMSAKYEEIWPPQVEDLVDIADHA 271
Query: 281 YSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQADRKLELLAFFLVELSLVEYE- 339
YS K++L MEK +++TLE+ ++VPT YVF+ RF+KA+ AD K+E + +L EL ++ Y+
Sbjct: 272 YSHKQILVMEKTILSTLEWYLTVPTHYVFLARFIKASIADEKMENMVHYLAELGVMHYDT 331
Query: 340 MLKFPPSHIAAAAVYTAQCAIYGFKQWCKTCEWHTNYSEDQLLE 383
M+ F PS +AA+A+Y A+ ++ W T + HT YSE QL++
Sbjct: 332 MIMFSPSMVAASAIYAARSSLRQVPIWTSTLKHHTGYSETQLMD 375
>AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587391
REVERSE LENGTH=648
Length = 648
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 154/219 (70%)
Query: 163 DANNPLAVTDYIEGLYSYYRKIESTGCVSPNYMTQQCDINERMRAILIDWLIEVHDKFDL 222
D +N L V +Y++ +Y +Y E+ +Y++ +++ R ILI+WLIEVH KFDL
Sbjct: 385 DESNQLEVAEYVDDIYQFYWTAEALNPALGHYLSAHAEVSPVTRGILINWLIEVHFKFDL 444
Query: 223 MHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYS 282
MHETL+LT++L+DR+L + + + ++QL+GL A+LLA KYE+ P + DLI IS ++Y+
Sbjct: 445 MHETLYLTMDLLDRYLSQVPIHKNEMQLIGLTALLLASKYEDYWHPRIKDLISISAESYT 504
Query: 283 RKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQADRKLELLAFFLVELSLVEYEMLK 342
R+++L ME+ M+ L+F ++ PT YVFM RFLKAAQ+++KLE LAF+L+EL LVEYE LK
Sbjct: 505 REQILGMERSMLKQLKFRLNAPTPYVFMLRFLKAAQSNKKLEQLAFYLIELCLVEYEALK 564
Query: 343 FPPSHIAAAAVYTAQCAIYGFKQWCKTCEWHTNYSEDQL 381
+ PS + A+A+Y A+C ++ W HT+Y+ Q+
Sbjct: 565 YKPSLLCASAIYVARCTLHMTPVWTSLLNNHTHYNVSQM 603
>AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817566
FORWARD LENGTH=437
Length = 437
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 130/198 (65%), Gaps = 7/198 (3%)
Query: 191 SPNYMTQ-QCDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKKLQ 249
S +YM Q Q DI+ MR ILIDWL+EV +++ L+ +TL+LTVNLIDRF+ + ++KLQ
Sbjct: 191 STSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIEKQKLQ 250
Query: 250 LVGLVAMLLACKYEEVSVPVVGDLILISDKAYSRKEVLEMEKLMVNTLEFNMSVPTAYVF 309
L+G+ ML+A KYEE+S P + + I+D Y+R EVL ME ++N+L F +SVPT F
Sbjct: 251 LLGITCMLIASKYEEISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTF 310
Query: 310 MRRFLKAAQADRK-----LELLAFFLVELSLVEYEMLKFPPSHIAAAAVYTAQCAIYGFK 364
+RRF++AAQA K +E LA + EL+L EY L+F PS IAA+AV+ A+ +
Sbjct: 311 LRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYTFLRFLPSLIAASAVFLARWTLDQSN 370
Query: 365 Q-WCKTCEWHTNYSEDQL 381
W +T + +T Y L
Sbjct: 371 HPWNQTLQHYTRYETSAL 388
>AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 |
chr1:29081904-29084137 REVERSE LENGTH=442
Length = 442
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 139/222 (62%), Gaps = 7/222 (3%)
Query: 162 GDANNPLAVTDYIEGLYSYYRKIESTGCVSPNYMTQ-QCDINERMRAILIDWLIEVHDKF 220
D +P + +Y + R E + +YM + Q IN MR+ILIDWL+EV +++
Sbjct: 167 SDLMDPQLCASFACDIYEHLRVSEVNKRPALDYMERTQSSINASMRSILIDWLVEVAEEY 226
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKA 280
L ETL+L VN +DR+L + ++ LQL+G+ M++A KYEEV VP V D I+D
Sbjct: 227 RLSPETLYLAVNYVDRYLTGNAINKQNLQLLGVTCMMIAAKYEEVCVPQVEDFCYITDNT 286
Query: 281 YSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQADRKL-----ELLAFFLVELSL 335
Y R E+LEME ++N L+F ++ PTA F+RRFL+AAQ +++ E LA +L ELSL
Sbjct: 287 YLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAAQGRKEVPSLLSECLACYLTELSL 346
Query: 336 VEYEMLKFPPSHIAAAAVYTAQCAIY-GFKQWCKTCEWHTNY 376
++Y ML++ PS +AA+AV+ AQ ++ K W T E +T+Y
Sbjct: 347 LDYAMLRYAPSLVAASAVFLAQYTLHPSRKPWNATLEHYTSY 388
>AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like
cyclin 3B from Arabidopsis | chr5:3601811-3604466
REVERSE LENGTH=436
Length = 436
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 125/191 (65%), Gaps = 7/191 (3%)
Query: 193 NYMTQ-QCDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKKLQLV 251
NYM Q DI+ MR ILIDWL+EV D + L+ +TL+LTVNLIDRFL + R++LQL+
Sbjct: 192 NYMELVQRDIDPDMRKILIDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQRLQLL 251
Query: 252 GLVAMLLACKYEEVSVPVVGDLILISDKAYSRKEVLEMEKLMVNTLEFNMSVPTAYVFMR 311
G+ ML+A KYEE+S P V + I+ Y+R EVL ME ++N + F +SVPT F+R
Sbjct: 252 GVSCMLIASKYEELSAPGVEEFCFITANTYTRPEVLSMEIQILNFVHFRLSVPTTKTFLR 311
Query: 312 RFLKAAQADRK-----LELLAFFLVELSLVEYEMLKFPPSHIAAAAVYTAQCAIYGFKQ- 365
RF+KAAQA K LE LA +L EL+LVEY L+F PS IAA+AV+ A+ +
Sbjct: 312 RFIKAAQASYKVPFIELEYLANYLAELTLVEYSFLRFLPSLIAASAVFLARWTLDQTDHP 371
Query: 366 WCKTCEWHTNY 376
W T + +T Y
Sbjct: 372 WNPTLQHYTRY 382
>AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365218
FORWARD LENGTH=450
Length = 450
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 134/227 (59%), Gaps = 7/227 (3%)
Query: 162 GDANNPLAVTDYIEGLYSYYRKIESTGCVSPNYMTQ-QCDINERMRAILIDWLIEVHDKF 220
D +PL Y ++ R E P++M + Q D+ + MR IL+DWL+EV +++
Sbjct: 177 SDDKDPLLCCLYAPEIHYNLRVSELKRRPLPDFMERIQKDVTQSMRGILVDWLVEVSEEY 236
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKA 280
L +TL+LTV LID FL V R++LQL+G+ ML+A KYEE+S P + + I+D
Sbjct: 237 TLASDTLYLTVYLIDWFLHGNYVQRQQLQLLGITCMLIASKYEEISAPRIEEFCFITDNT 296
Query: 281 YSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQADR-----KLELLAFFLVELSL 335
Y+R +VLEME ++ F + PT F+RRFL+AAQA R ++E LA +L EL+L
Sbjct: 297 YTRDQVLEMENQVLKHFSFQIYTPTPKTFLRRFLRAAQASRLSPSLEVEFLASYLTELTL 356
Query: 336 VEYEMLKFPPSHIAAAAVYTAQCAI-YGFKQWCKTCEWHTNYSEDQL 381
++Y LKF PS +AA+AV+ A+ + W T E +T Y L
Sbjct: 357 IDYHFLKFLPSVVAASAVFLAKWTMDQSNHPWNPTLEHYTTYKASDL 403
>AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 |
chr1:30214694-30216861 FORWARD LENGTH=461
Length = 461
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 134/227 (59%), Gaps = 7/227 (3%)
Query: 162 GDANNPLAVTDYIEGLYSYYRKIESTGCVSPNYMTQ-QCDINERMRAILIDWLIEVHDKF 220
D +PL + Y +Y R E P++M + Q D+ E MR IL+DWL+EV +++
Sbjct: 186 SDDKDPLLCSLYAPDIYYNLRVAELKRRPFPDFMEKTQRDVTETMRGILVDWLVEVSEEY 245
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKA 280
L+ +TL+LTV LID FL V R++LQL+G+ ML+A KYEE+ P + + I+D
Sbjct: 246 TLVPDTLYLTVYLIDWFLHGNYVERQRLQLLGITCMLIASKYEEIHAPRIEEFCFITDNT 305
Query: 281 YSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQA-----DRKLELLAFFLVELSL 335
Y+R +VLEME ++ F + PT+ F+RRFL+AAQ ++E LA +L EL+L
Sbjct: 306 YTRDQVLEMESQVLKHFSFQIYTPTSKTFLRRFLRAAQVSFPNQSLEMEFLANYLTELTL 365
Query: 336 VEYEMLKFPPSHIAAAAVYTAQCAI-YGFKQWCKTCEWHTNYSEDQL 381
++Y LKF PS IAA+AV+ A+ + W T E +T Y L
Sbjct: 366 MDYPFLKFLPSIIAASAVFLAKWTLNQSSHPWNPTLEHYTTYKASDL 412
>AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 |
chr1:16775035-16777182 REVERSE LENGTH=460
Length = 460
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 139/228 (60%), Gaps = 9/228 (3%)
Query: 163 DANN--PLAVTDYIEGLYSYYRKIESTGCVSPNYMTQ-QCDINERMRAILIDWLIEVHDK 219
D+NN P + +Y + R E+ +YM + Q D+N MR IL+DWLIEV ++
Sbjct: 182 DSNNGDPQLCATFACDIYKHLRASEAKKRPDVDYMERVQKDVNSSMRGILVDWLIEVSEE 241
Query: 220 FDLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDK 279
+ L+ ETL+LTVN IDR+L + R+KLQL+G+ M++A KYEE+ P V + I+D
Sbjct: 242 YRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAKYEEICAPQVEEFCYITDN 301
Query: 280 AYSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQADR-----KLELLAFFLVELS 334
Y + EVL+ME ++N L+F M+ PT F+RRF++AA +LE +A ++ ELS
Sbjct: 302 TYLKDEVLDMESDVLNYLKFEMTAPTTKCFLRRFVRAAHGVHEAPLMQLECMANYIAELS 361
Query: 335 LVEYEMLKFPPSHIAAAAVYTAQCAIYGFKQ-WCKTCEWHTNYSEDQL 381
L+EY ML PS +AA+A++ A+ + ++ W T + +T Y +L
Sbjct: 362 LLEYTMLSHSPSLVAASAIFLAKYILDPTRRPWNSTLQHYTQYKAMEL 409
>AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17302584 FORWARD LENGTH=372
Length = 372
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 142/227 (62%), Gaps = 9/227 (3%)
Query: 164 ANNPLAVTDYIEGLYSYYRKIESTGCVSP--NYMTQ-QCDINERMRAILIDWLIEVHDKF 220
+++P Y+ +Y Y R++E P +Y+ + Q D+ MR +L+DWL+EV +++
Sbjct: 93 SDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLVEVAEEY 152
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKA 280
L ETL+LTV+ IDRFL +TV ++KLQLVG+ AML+A KYEE+S P V D I+D
Sbjct: 153 KLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEISPPKVDDFCYITDNT 212
Query: 281 YSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQADRK-----LELLAFFLVELSL 335
+S+++V++ME ++ L+F + PT FMRRF + AQ D K LE L +L ELS+
Sbjct: 213 FSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVPHLQLEPLCCYLSELSI 272
Query: 336 VEYEMLKFPPSHIAAAAVYTAQCAIYGFKQ-WCKTCEWHTNYSEDQL 381
++Y+ +KF PS +AA+AV+ A+ I + W + E +T Y L
Sbjct: 273 LDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKAADL 319
>AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 |
chr5:17293227-17294789 FORWARD LENGTH=355
Length = 355
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 142/227 (62%), Gaps = 7/227 (3%)
Query: 164 ANNPLAVTDYIEGLYSYYRKIESTGCVSPNYMTQ-QCDINERMRAILIDWLIEVHDKFDL 222
+++P Y+ ++ Y R++E +Y+ + Q D+ MR +L+DWL+EV +++ L
Sbjct: 78 SDDPQMCGPYVTSIFEYLRQLEVKSRPLVDYIEKIQKDVTSNMRGVLVDWLVEVAEEYKL 137
Query: 223 MHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYS 282
+ +TL+L V+ IDRFL +TV +++LQL+G+ +ML+A KYEE++ P V D I+D Y+
Sbjct: 138 LSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFCYITDNTYT 197
Query: 283 RKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQAD-----RKLELLAFFLVELSLVE 337
++E+++ME ++ L+F + PT+ F+RRF + AQ D ++E L +L ELS+++
Sbjct: 198 KQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSYLSELSMLD 257
Query: 338 YEMLKFPPSHIAAAAVYTAQCAIYGFKQ-WCKTCEWHTNYSEDQLLE 383
Y+ +KF PS +AA+AV+ A+ I + W E +T Y L E
Sbjct: 258 YQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKE 304
>AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=369
Length = 369
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 127/197 (64%), Gaps = 7/197 (3%)
Query: 192 PNYMTQ-QCDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKKLQL 250
P+Y+ + Q D+ MRA+L+DWL+EV +++ L+ +TL+LT++ +DRFL + + R+KLQL
Sbjct: 116 PDYIEKVQSDLTPHMRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQL 175
Query: 251 VGLVAMLLACKYEEVSVPVVGDLILISDKAYSRKEVLEMEKLMVNTLEFNMSVPTAYVFM 310
VG+ AML+A KYEE+ P V D I+D ++++EV+ ME ++ L+F + PT F+
Sbjct: 176 VGVSAMLIASKYEEIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFL 235
Query: 311 RRFLKAAQADRK-----LELLAFFLVELSLVEYEMLKFPPSHIAAAAVYTAQCAIYGFKQ 365
RRF + AQ D K +E L +L ELS+++Y +K+ PS ++A+AV+ A+ I +
Sbjct: 236 RRFTRVAQEDFKDSQLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQH 295
Query: 366 -WCKTCEWHTNYSEDQL 381
W + E +T Y L
Sbjct: 296 PWNQMLEEYTKYKAADL 312
>AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 |
chr1:17303676-17305197 FORWARD LENGTH=327
Length = 327
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 135/222 (60%), Gaps = 9/222 (4%)
Query: 164 ANNPLAVTDYIEGLYSYYRKIESTGCVSP--NYMTQ-QCDINERMRAILIDWLIEVHDKF 220
+++P Y+ +Y Y R++E + P +Y+ + Q DI R +L+DWL+EV ++F
Sbjct: 47 SDDPQMCGLYVSDIYEYLRELEVKPKLRPLHDYIEKIQEDITPSKRGVLVDWLVEVAEEF 106
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKA 280
+L+ ETL+LTV+ IDRFL + V LQLVG+ AM +A KYEE P V D I+
Sbjct: 107 ELVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASKYEEKRRPKVEDFCYITANT 166
Query: 281 YSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQADRK-----LELLAFFLVELSL 335
Y++++VL+ME+ ++ LEF + PT F+RRF++ AQ D K LE L +L ELS+
Sbjct: 167 YTKQDVLKMEEDILLALEFELGRPTTNTFLRRFIRVAQEDFKVPNLQLEPLCCYLSELSM 226
Query: 336 VEYEMLKFPPSHIAAAAVYTAQCAIYGFKQ-WCKTCEWHTNY 376
++Y +KF PS +AA+AV+ A+ I + W + E T Y
Sbjct: 227 LDYSCVKFVPSLLAASAVFLARFIILPNQHPWSQMLEECTKY 268
>AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=370
Length = 370
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 127/198 (64%), Gaps = 8/198 (4%)
Query: 192 PNYMTQ-QCDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKKLQL 250
P+Y+ + Q D+ MRA+L+DWL+EV +++ L+ +TL+LT++ +DRFL + + R+KLQL
Sbjct: 116 PDYIEKVQSDLTPHMRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQL 175
Query: 251 VGLVAMLLAC-KYEEVSVPVVGDLILISDKAYSRKEVLEMEKLMVNTLEFNMSVPTAYVF 309
VG+ AML+A KYEE+ P V D I+D ++++EV+ ME ++ L+F + PT F
Sbjct: 176 VGVSAMLIASRKYEEIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTF 235
Query: 310 MRRFLKAAQADRK-----LELLAFFLVELSLVEYEMLKFPPSHIAAAAVYTAQCAIYGFK 364
+RRF + AQ D K +E L +L ELS+++Y +K+ PS ++A+AV+ A+ I +
Sbjct: 236 LRRFTRVAQEDFKDSQLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQ 295
Query: 365 Q-WCKTCEWHTNYSEDQL 381
W + E +T Y L
Sbjct: 296 HPWNQMLEEYTKYKAADL 313
>AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 |
chr1:12595110-12599628 FORWARD LENGTH=491
Length = 491
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 103/160 (64%), Gaps = 23/160 (14%)
Query: 162 GDANNPLAVTDYIEGLYSYYRKIESTGCVSPN-YMTQQCDINERMRAILIDWLIEVHDKF 220
D +N +A +Y++ +YS+Y+++E P YM Q ++NE+MRAILIDWL+EVH KF
Sbjct: 261 SDKDNHVAAVEYVDDMYSFYKEVEKES--QPKMYMHIQTEMNEKMRAILIDWLLEVHIKF 318
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKA 280
+L ETL+LTVN+IDRFL + V +++LQ V DL+ ++D A
Sbjct: 319 ELNLETLYLTVNIIDRFLYVKAVPKRELQ--------------------VNDLVYVTDNA 358
Query: 281 YSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQAD 320
YS +++L M+K ++ LE+ +++PT YVF+ F+KA+ +D
Sbjct: 359 YSSRQILVMKKAILGNLEWYLTIPTQYVFLFCFIKASISD 398
>AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 |
chr1:12595110-12599354 FORWARD LENGTH=483
Length = 483
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 103/160 (64%), Gaps = 23/160 (14%)
Query: 162 GDANNPLAVTDYIEGLYSYYRKIESTGCVSPN-YMTQQCDINERMRAILIDWLIEVHDKF 220
D +N +A +Y++ +YS+Y+++E P YM Q ++NE+MRAILIDWL+EVH KF
Sbjct: 258 SDKDNHVAAVEYVDDMYSFYKEVEKES--QPKMYMHIQTEMNEKMRAILIDWLLEVHIKF 315
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKA 280
+L ETL+LTVN+IDRFL + V +++LQ V DL+ ++D A
Sbjct: 316 ELNLETLYLTVNIIDRFLYVKAVPKRELQ--------------------VNDLVYVTDNA 355
Query: 281 YSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQAD 320
YS +++L M+K ++ LE+ +++PT YVF+ F+KA+ +D
Sbjct: 356 YSSRQILVMKKAILGNLEWYLTIPTQYVFLFCFIKASISD 395
>AT1G14750.1 | Symbols: SDS | Cyclin family protein |
chr1:5079674-5082423 REVERSE LENGTH=578
Length = 578
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 204 RMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKK-LQLVGLVAMLLACKY 262
R+R+I++ W+++ L ETLFL V L+DRFL K + ++ L LVG+ ++ LA +
Sbjct: 385 RLRSIMVQWIVKQCSDMGLQQETLFLGVGLLDRFLSKGSFKSERTLILVGIASLTLATRI 444
Query: 263 EEVSV--PVVGDLILISDKAYSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQAD 320
EE + I + YSR EV+ ME L+ L F PT + F+ +LKAA+A+
Sbjct: 445 EENQPYNSIRKRNFTIQNLRYSRHEVVAMEWLVQEVLNFKCFTPTIFNFLWFYLKAARAN 504
Query: 321 RKLELLAFFLVELSLVEYEMLKFPPSHIAAAAVYTAQCAIYGFKQWCKTCEWHTNYSEDQ 380
++E A L SL + L F PS +AAA V A + + + H ++++
Sbjct: 505 PEVERKAKSLAVTSLSDQTQLCFWPSTVAAALVVLACIEHNKISAYQRVIKVHVRTTDNE 564
Query: 381 LLE 383
L E
Sbjct: 565 LPE 567
>AT1G14750.2 | Symbols: SDS | Cyclin family protein |
chr1:5079674-5082423 REVERSE LENGTH=410
Length = 410
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 204 RMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKK-LQLVGLVAMLLACKY 262
R+R+I++ W+++ L ETLFL V L+DRFL K + ++ L LVG+ ++ LA +
Sbjct: 217 RLRSIMVQWIVKQCSDMGLQQETLFLGVGLLDRFLSKGSFKSERTLILVGIASLTLATRI 276
Query: 263 EEVSV--PVVGDLILISDKAYSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAAQAD 320
EE + I + YSR EV+ ME L+ L F PT + F+ +LKAA+A+
Sbjct: 277 EENQPYNSIRKRNFTIQNLRYSRHEVVAMEWLVQEVLNFKCFTPTIFNFLWFYLKAARAN 336
Query: 321 RKLELLAFFLVELSLVEYEMLKFPPSHIAAAAVYTA 356
++E A L SL + L F PS +AAA V A
Sbjct: 337 PEVERKAKSLAVTSLSDQTQLCFWPSTVAAALVVLA 372
>AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17301695 FORWARD LENGTH=192
Length = 192
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 3/100 (3%)
Query: 164 ANNPLAVTDYIEGLYSYYRKIESTGCVSP--NYMTQ-QCDINERMRAILIDWLIEVHDKF 220
+++P Y+ +Y Y R++E P +Y+ + Q D+ MR +L+DWL+EV +++
Sbjct: 93 SDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLVEVAEEY 152
Query: 221 DLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLAC 260
L ETL+LTV+ IDRFL +TV ++KLQLVG+ AML+A
Sbjct: 153 KLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIAS 192
>AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 |
chr1:26440015-26441980 FORWARD LENGTH=339
Length = 339
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 194 YMTQQCDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKK---LQL 250
+ T+ D + R ++ W+++V ++ T +L VN +DRFL + + +QL
Sbjct: 72 FQTRSLDASAREDSVA--WILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQL 129
Query: 251 VGLVAMLLACKYEEVSVPVVGDLILISDK-AYSRKEVLEMEKLMVNTLEFNMSVPTAYVF 309
+ + + LA K EE+ VP + D + K + K + ME L+++ L++ + T + F
Sbjct: 130 LAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDF 189
Query: 310 MRRFLKAAQADRKLELLAFFLVELSLV------EYEMLKFPPSHIAAAAV 353
+ F A + D L FF+ + + E L++ PS IAAAA+
Sbjct: 190 ISFF--AYKIDPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAI 237
>AT1G35440.1 | Symbols: CYCT1;1 | cyclin T1;1 |
chr1:13035294-13036037 REVERSE LENGTH=247
Length = 247
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 16/157 (10%)
Query: 213 LIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGD 272
L E+ + + +T+ + L RF +Q++ + + V ++ M +A K E P GD
Sbjct: 41 LQELGQRLNNPQKTIATAIVLCQRFFTRQSLTKNDPKTVAIICMFIAGKVEGSPRPA-GD 99
Query: 273 LILISDKAYSRKE------------VLEMEKLMVNTLEFNMSVPTAYVFMRRFLKAA--- 317
++ +S + KE VL EKL+++TLE ++ + Y + ++K +
Sbjct: 100 VVFVSYRVLFNKEPLRDVFERLKMTVLTGEKLVLSTLECDLEIEHPYKLVMDWVKRSVKT 159
Query: 318 QADRKLELLAFFLVELSLVEYEMLKFPPSHIAAAAVY 354
+ R+L AF V SL L+F PS IA+AA+Y
Sbjct: 160 EDGRRLCQAAFNFVNDSLRTSLCLQFGPSQIASAAIY 196
>AT2G22490.2 | Symbols: CYCD2;1 | Cyclin D2;1 | chr2:9554157-9555873
REVERSE LENGTH=362
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 200 DINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKK---LQLVGLVAM 256
D++ +R +DW+++V + H + L++N +DRFL + + K QL+ + +
Sbjct: 91 DLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCL 150
Query: 257 LLACKYEEVSVPVVGDLILISDK-AYSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLK 315
LA K EE VP + DL + K + K + ME L+V TL + + T + F+ F+
Sbjct: 151 SLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVD 210
Query: 316 AAQADRKLELL----AFFLVELSLVEYEMLKFPPS 346
L+ F L +E+ L F PS
Sbjct: 211 KISGHVSENLIYRSSRFILNTTKAIEF--LDFRPS 243
>AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | Cyclin D2;1 |
chr2:9554157-9555873 REVERSE LENGTH=361
Length = 361
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 200 DINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKK---LQLVGLVAM 256
D++ +R +DW+++V + H + L++N +DRFL + + K QL+ + +
Sbjct: 91 DLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCL 150
Query: 257 LLACKYEEVSVPVVGDLILISDK-AYSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLK 315
LA K EE VP + DL + K + K + ME L+V TL + + T + F+ F+
Sbjct: 151 SLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVD 210
Query: 316 AAQADRKLELL----AFFLVELSLVEYEMLKFPPS 346
L+ F L +E+ L F PS
Sbjct: 211 KISGHVSENLIYRSSRFILNTTKAIEF--LDFRPS 243
>AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 |
chr4:17679497-17680788 FORWARD LENGTH=321
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 192 PNYMTQQCDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKK---L 248
P+ T D R I IDW++ +F H+T ++ ++ D FL K+ + + + +
Sbjct: 63 PSKTTSSSD-----RLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGKDETWAM 117
Query: 249 QLVGLVAMLLACKYEEVSVPVVGDLILISDKAYSRKEVLEMEKLMVNTLEFNMSVPTAYV 308
+L+ + + LA K EE VP + D + + + E L+++TL++ M++ T +
Sbjct: 118 RLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFH 177
Query: 309 FMRRFLKAAQAD 320
+ FL D
Sbjct: 178 YFNYFLAKISQD 189
>AT4G37630.1 | Symbols: CYCD5;1 | cyclin d5;1 |
chr4:17679497-17680788 FORWARD LENGTH=323
Length = 323
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 192 PNYMTQQCDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKK---- 247
P+ T D R I IDW++ +F H+T ++ ++ D FL K+ + +K
Sbjct: 63 PSKTTSSSD-----RLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETW 117
Query: 248 -LQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYSRKEVLEMEKLMVNTLEFNMSVPTA 306
++L+ + + LA K EE VP + D + + + E L+++TL++ M++ T
Sbjct: 118 AMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITP 177
Query: 307 YVFMRRFLKAAQAD 320
+ + FL D
Sbjct: 178 FHYFNYFLAKISQD 191
>AT5G02110.1 | Symbols: CYCD7;1, CYCD7 | CYCLIN D7;1 |
chr5:417087-418553 FORWARD LENGTH=341
Length = 341
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 212 WLIEVHDKFDLMHETLFLTVNLIDRFLEKQTV---VRKKLQLVGLVAMLLACKYEEVSVP 268
WLI+ + +L +ET+F N DRF+ ++LV + ++ +A K+ EV+ P
Sbjct: 84 WLIQTRSRLNLSYETVFSAANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKFNEVTTP 143
Query: 269 -VVGDLILISDKAYSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLK--AAQADRK-LE 324
+ + + V +ME +++ LE+ ++ T+Y F + + D +
Sbjct: 144 LLEELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGMVGDHMIMN 203
Query: 325 LLAFFLVELSLVEYEMLKFPPSHIAAAAVY 354
+ L+++ + + +ML++PPS +A AA++
Sbjct: 204 RITNHLLDV-ICDLKMLQYPPSVVATAAIW 232
>AT5G67260.1 | Symbols: CYCD3;2 | CYCLIN D3;2 |
chr5:26836313-26837665 FORWARD LENGTH=367
Length = 367
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 210 IDWLIEVHDKFDLMHETLFLTVNLIDRFLEK---QTVVRKKLQLVGLVAMLLACKYEEVS 266
+DW++ V + T L VN DRF+ QT QLV + ++ LA K EE+
Sbjct: 100 LDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQ 159
Query: 267 VPVVGDLILISDK-AYSRKEVLEMEKLMVNTLEFNMSVPTAYVF----MRRF 313
VP++ DL + + + K + ME L+++TL++ M T F +RRF
Sbjct: 160 VPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRF 211
>AT5G65420.3 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=318
Length = 318
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 229 LTVNLIDRFLEKQTVVRKK---LQLVGLVAMLLACKYEEVSVPVVGDLILISDK-AYSRK 284
L +N +DRFL + K LQL+ + + LA K EE VP++ DL + + + K
Sbjct: 111 LAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAK 170
Query: 285 EVLEMEKLMVNTLEFNMSVPTAYVFMRRFL-KAAQADRK----LELLAFFLVELSLVEYE 339
V ME L++N L++ + T ++R FL K ++ D++ L + ++ + +
Sbjct: 171 SVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGID 230
Query: 340 MLKFPPSHIAAAAVYT 355
L+F PS +AAA +
Sbjct: 231 FLEFRPSEVAAAVALS 246
>AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=308
Length = 308
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 229 LTVNLIDRFLEKQTVVRKK---LQLVGLVAMLLACKYEEVSVPVVGDLILISDK-AYSRK 284
L +N +DRFL + K LQL+ + + LA K EE VP++ DL + + + K
Sbjct: 101 LAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAK 160
Query: 285 EVLEMEKLMVNTLEFNMSVPTAYVFMRRFL-KAAQADRK----LELLAFFLVELSLVEYE 339
V ME L++N L++ + T ++R FL K ++ D++ L + ++ + +
Sbjct: 161 SVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGID 220
Query: 340 MLKFPPSHIAAAAVYT 355
L+F PS +AAA +
Sbjct: 221 FLEFRPSEVAAAVALS 236
>AT4G34160.1 | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 |
chr4:16357903-16359304 FORWARD LENGTH=376
Length = 376
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 175 EGLYSYYRKIESTG--CVSPNYMTQQCDINERMRAILIDWLIEVHDKFDLMHETLFLTVN 232
E L + + K E G C+ Y++ +R A+ W++ V+ + L +
Sbjct: 61 EDLVTLFSKEEEQGLSCLDDVYLS-----TDRKEAV--GWILRVNAHYGFSTLAAVLAIT 113
Query: 233 LIDRFLEKQTVVRKK---LQLVGLVAMLLACKYEEVSVPVVGDLILISDK-AYSRKEVLE 288
+D+F+ ++ R K LQLV + + LA K EE VP++ D + K + K +
Sbjct: 114 YLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQR 173
Query: 289 MEKLMVNTLEFNMSVPTAYVFMRRFLK 315
ME L+++TLE+ M + T F+ ++
Sbjct: 174 MELLILSTLEWKMHLITPISFVDHIIR 200
>AT3G50070.1 | Symbols: CYCD3;3 | CYCLIN D3;3 |
chr3:18565322-18566669 REVERSE LENGTH=361
Length = 361
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 210 IDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQTVVRKK---LQLVGLVAMLLACKYEEVS 266
+DW+ +V + T L VN DRF+ + K QL L + LA K EE+
Sbjct: 90 LDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIR 149
Query: 267 VPVVGDLILISDK-AYSRKEVLEMEKLMVNTLEFNMSVPTAYVFMRRFLK--AAQADRKL 323
VP + D + + + K + ME L+++TL++ M T F ++ + ++ +L
Sbjct: 150 VPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKSHHQL 209
Query: 324 ELLAFF-LVELSLV-EYEMLKFPPSHIAAAAVYTA 356
E L+ + LS++ + L F PS +A A + +
Sbjct: 210 EFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSV 244