Miyakogusa Predicted Gene

Lj2g3v1643300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1643300.1 Non Chatacterized Hit- tr|K4BI80|K4BI80_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,32.58,1e-18,RWP-RK,Plant regulator RWP-RK; coiled-coil,NULL;
seg,NULL; RWP_RK,Plant regulator
RWP-RK,NODE_66296_length_1203_cov_10.309227.path2.1
         (325 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G35590.1 | Symbols:  | RWP-RK domain-containing protein | chr...   262   2e-70
AT5G66990.1 | Symbols:  | RWP-RK domain-containing protein | chr...   100   1e-21
AT5G53040.1 | Symbols:  | RWP-RK domain-containing protein | chr...    98   9e-21
AT1G74480.1 | Symbols:  | RWP-RK domain-containing protein | chr...    97   1e-20
AT1G18790.1 | Symbols:  | RWP-RK domain-containing protein | chr...    97   2e-20
AT1G76350.1 | Symbols:  | Plant regulator RWP-RK family protein ...    50   3e-06
AT4G24020.1 | Symbols: NLP7 | NIN like protein 7 | chr4:12479904...    49   7e-06

>AT4G35590.1 | Symbols:  | RWP-RK domain-containing protein |
           chr4:16892909-16894865 FORWARD LENGTH=370
          Length = 370

 Score =  262 bits (670), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 156/329 (47%), Positives = 202/329 (61%), Gaps = 31/329 (9%)

Query: 15  IIQPELMRSVHVYRQCGDDGXXXXXXXXXFLFSKYSYYVEMQASPILQLQKSCVSGIREG 74
           +I+ E++RS+HVY     +          F F   S YVE +A P+ + +      I EG
Sbjct: 53  VIRKEMVRSLHVYESVEIE--------REFWFKSKSCYVEKKAKPLFRSEDFRRPEISEG 104

Query: 75  YRNGVWDCIFAFHAGHSPQFSRIPPLLLVTRNPKLHCIPNLLNDLHIIYKLD---VKEED 131
              G W CIF F   HS    R P LL ++RNPKL  IPNL N+L  I +L    + EE+
Sbjct: 105 SVFGTWRCIFVFRFNHS--LPRFPTLLCLSRNPKLEDIPNLANELKFISELKPSKIYEEE 162

Query: 132 IDVTQEESLGNNNDCLPSEIALPKRDLDLNCLPYEEDESELQDNE--------------I 177
              +  E   N++   P ++ L +   DLNCLP  E ESE   NE               
Sbjct: 163 QCSSSTEGYYNSDLPKPRKLVLKQ---DLNCLPDSETESEESVNEKTEHSEFENDKTEQS 219

Query: 178 EVESLTGLVGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIP 237
           E ++ T ++ KKKR PS H+A ++  +L KYFD+ IVEASR L VGLTVLKKKCREFGIP
Sbjct: 220 ESDAKTEILKKKKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIP 279

Query: 238 RWPHRKIKSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESEKENIEKQPFIEIQSE 297
           RWPHRKIKSLD LIHDLQ  A+ Q+ +++AAAMAV K+Q+ LE+EK NI K+PF+EI  E
Sbjct: 280 RWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIE 339

Query: 298 TKKFRQDIFKRRYRA-RAIEKQNSTVSSS 325
           TKKFRQ+ FK+R+RA RA + Q S V+SS
Sbjct: 340 TKKFRQENFKKRHRASRAKKNQESLVTSS 368


>AT5G66990.1 | Symbols:  | RWP-RK domain-containing protein |
           chr5:26744257-26745362 REVERSE LENGTH=277
          Length = 277

 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 87/136 (63%), Gaps = 2/136 (1%)

Query: 185 LVGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKI 244
           ++ K++      I N++   + +YF MPI +A++ LN+G+T+LKK+CRE GIPRWPHRK+
Sbjct: 144 IIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKL 203

Query: 245 KSLDSLIHDLQEMAKHQELEDKAAAMAVMKRQKMLESEKENIEKQPFIEIQSETKKFRQD 304
            SL++LI +L+++  +   + +     +    ++LE EK+ IE+ P +E   +TK+ RQ 
Sbjct: 204 TSLNALIANLKDLLGNT--KGRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQA 261

Query: 305 IFKRRYRARAIEKQNS 320
            FK +Y+ R +   +S
Sbjct: 262 CFKAKYKRRRLFSSSS 277


>AT5G53040.1 | Symbols:  | RWP-RK domain-containing protein |
           chr5:21506967-21507948 REVERSE LENGTH=256
          Length = 256

 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 13/111 (11%)

Query: 203 SDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQE 262
           S++ ++FD PI++A++ LNVGLTVLKK+CRE GI RWPHRK+KSL+SLI +L+ +   +E
Sbjct: 151 SEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGMEEE 210

Query: 263 LEDKAAAMAVMKRQKMLESEKENIEKQPFIEIQSETKKFRQDIFKRRYRAR 313
           +             K LE  +  IE++P  E+   TKK RQ  FK  Y+ R
Sbjct: 211 V-------------KNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRR 248


>AT1G74480.1 | Symbols:  | RWP-RK domain-containing protein |
           chr1:27993032-27994178 REVERSE LENGTH=298
          Length = 298

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 73/110 (66%), Gaps = 3/110 (2%)

Query: 198 ANIAYSDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEM 257
             ++   + +YF MPI +A+  LNVGLT+LK++CRE GI RWPHRK+ SL++LI +++E+
Sbjct: 133 TTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKEL 192

Query: 258 AKHQELEDKAAAMAVMKRQKMLESEKENIEKQPFIEIQSETKKFRQDIFK 307
              Q++E +  A  +    +MLE EK  IE  P +E + +TK+ RQ  FK
Sbjct: 193 ---QKMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFK 239


>AT1G18790.1 | Symbols:  | RWP-RK domain-containing protein |
           chr1:6478851-6480043 REVERSE LENGTH=269
          Length = 269

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 3/106 (2%)

Query: 208 YFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMAKHQELEDKA 267
           YF MPI +A+R LN+GLT+LKK+CRE GI RWPHRK+ SL  LI +++E+ K +  E++ 
Sbjct: 136 YFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEGEENED 195

Query: 268 AAMAVMKRQKMLESEKENIEKQPFIEIQSETKKFRQDIFKRRYRAR 313
                +++   LE EK+ IEK P ++ + +TK+ RQ  FK  ++ +
Sbjct: 196 KLRNALEK---LEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRK 238


>AT1G76350.1 | Symbols:  | Plant regulator RWP-RK family protein |
           chr1:28640143-28642817 FORWARD LENGTH=808
          Length = 808

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 165 YEEDESELQDNEIEVESLTGLVGKKKRAPSNHIANIAYSDLVKYFDMPIVEASRRLNVGL 224
           Y +  S  ++N     S    V +KKR  +    NI    L +YF   + +A++ + V  
Sbjct: 517 YGKGVSVNENNTFSSASGFNRVTEKKRTKAE--KNITLDVLRQYFAGSLKDAAKSIGVCP 574

Query: 225 TVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMAK 259
           T LK+ CR+ GI RWP RKIK +    H LQ++ +
Sbjct: 575 TTLKRICRQHGIQRWPSRKIKKVG---HSLQKIQR 606


>AT4G24020.1 | Symbols: NLP7 | NIN like protein 7 |
           chr4:12479904-12483822 FORWARD LENGTH=959
          Length = 959

 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 199 NIAYSDLVKYFDMPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMA 258
            I+   L +YF   + +A++ L V  T +K+ CR+ GI RWP RKIK ++  I  L+ + 
Sbjct: 591 TISLDVLQQYFTGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKIKKVNRSITKLKRVI 650

Query: 259 KHQELEDKAAAMAVM 273
           +  +  D    +  M
Sbjct: 651 ESVQGTDGGLDLTSM 665