Miyakogusa Predicted Gene
- Lj2g3v1643290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1643290.1 Non Chatacterized Hit- tr|I1J8D0|I1J8D0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41327
PE,83.84,0,TPR-like,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide
,gene.g41969.t1.1
(687 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 393 e-109
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 388 e-108
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 388 e-108
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 388 e-108
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 388 e-108
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 380 e-105
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 373 e-103
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 367 e-101
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 365 e-101
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 4e-99
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 357 2e-98
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 2e-98
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 4e-96
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 348 6e-96
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 3e-95
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 6e-95
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 6e-95
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 1e-94
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 9e-94
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 9e-94
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 4e-93
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 6e-93
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 8e-93
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 5e-92
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 335 7e-92
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 7e-92
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 6e-91
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 330 2e-90
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 5e-90
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 5e-90
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 7e-90
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 322 5e-88
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 319 5e-87
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 1e-86
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 1e-86
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 4e-86
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 7e-86
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 2e-85
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 3e-84
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 6e-84
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 7e-84
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 305 6e-83
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 302 6e-82
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 299 5e-81
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 298 7e-81
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 1e-80
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 6e-80
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 295 8e-80
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 293 4e-79
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 8e-79
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 289 4e-78
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 5e-78
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 289 5e-78
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 6e-78
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 285 6e-77
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 285 7e-77
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 4e-76
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 2e-75
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 277 2e-74
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 4e-74
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 276 5e-74
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 275 6e-74
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 4e-73
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 2e-72
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 266 4e-71
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 265 8e-71
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 263 2e-70
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 8e-70
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 3e-69
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 258 7e-69
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 9e-69
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 2e-67
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 9e-67
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 8e-66
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 247 2e-65
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 1e-64
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 2e-64
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 7e-64
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 1e-62
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 238 1e-62
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 2e-62
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 9e-62
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 233 3e-61
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 233 4e-61
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 5e-61
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 7e-61
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 7e-61
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 231 1e-60
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 227 2e-59
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 225 8e-59
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 221 1e-57
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 2e-57
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 4e-57
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 219 6e-57
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 7e-57
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 6e-55
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 8e-55
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 5e-54
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 205 7e-53
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 1e-51
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 5e-50
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 182 6e-46
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 6e-45
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 5e-43
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 9e-43
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 7e-42
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 9e-38
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 123 3e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 4e-26
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 4e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 100 7e-21
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 99 7e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 97 3e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 91 4e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 89 1e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 88 2e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 87 4e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 5e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 86 7e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 7e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 8e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 7e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 9e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 79 1e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 6e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 75 1e-13
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 9e-13
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 71 2e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 71 3e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 70 4e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 70 6e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 7e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 60 7e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 58 2e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 58 3e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 7e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 56 1e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 54 4e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 6e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 50 6e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 7e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 49 8e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/698 (33%), Positives = 391/698 (56%), Gaps = 17/698 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACAT---PAL 56
MP RN+V+W+T++S+ G ++ +F + R + PNEY S ++AC+
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGR 164
Query: 57 WNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMIS 116
W V Q+ LV+SG +RD + G+ L+ Y +G N+ A VF L E+ V W MIS
Sbjct: 165 WMV-FQLQSFLVKSGFDRDVYVGTLLIDFYLKDG-NIDYARLVFDALPEKSTVTWTTMIS 222
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAE 173
G ++G + +LF ++ E + + PD ++L CS L + QIH ++G E
Sbjct: 223 GCVKMGRSYVSLQLFYQLME-DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLE 281
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
DA + + ++D Y KCG V + K+F+ M K+ W++++SGY N +EA+ F M
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
K +KPD + SS L +C + L G QVH IK ND +V + L+ +YA L
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSS--RSMQLLQELHRTTSLQIQGATLIAI 351
DA K+F D+V +N+MI +++LG ++ + +++ R ++ T +++
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSL 460
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
L++ + + L +QIH L+ K ++ G+AL+ +YS C + D+ F ++ KD
Sbjct: 461 LRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL 520
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
W+S+ Y Q EAL L E+ ++ +++ L ++ +G++FH
Sbjct: 521 VIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQ 580
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
+K G + Y+ ++++DMYAKCG ED+ K FD+ + V +N++I YA+HG+ K+A
Sbjct: 581 LLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKA 640
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
+++ + G+ PN +TF+ +LSACSHAG +ED L F LML ++ I+PE+EHY C+V
Sbjct: 641 LQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVS 699
Query: 592 AYGRAGRLEEAYQIVQKDGSESA---WRTLLSACRNHNNTKIGEKSAKKMIELNPSDHAS 648
GRAGRL +A ++++K ++ A WR+LLS C N ++ E +A+ I +P D S
Sbjct: 700 LLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGS 759
Query: 649 YILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ +LSNIY +G W EA+ RE+M GV K+PG SW+
Sbjct: 760 FTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/606 (26%), Positives = 301/606 (49%), Gaps = 14/606 (2%)
Query: 44 FSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL 103
F+ LL+ A+ L + +HG ++ GLE D + + L+ +YS G + A VF +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVY-ARKVFEKM 105
Query: 104 LERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG----- 158
ER+LV+W+ M+S G + +F E W P+ S ++ CS L
Sbjct: 106 PERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW 165
Query: 159 EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYT 218
V Q+ K G + D V + ++D Y K G++ R +FD++ EK W+++ISG
Sbjct: 166 MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV 225
Query: 219 VNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCF 278
R ++ F + + V PD ++LS+ L AC + L G Q+H +++ G + D
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS 285
Query: 279 VASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT 338
+ +VL+ Y G + A KLF + +K+I++W +++ + Q +M+L + +
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ-NALHKEAMELFTSMSK- 343
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
L+ +IL SC + L G Q+H+ +K+++ + + V N+L+ MY++C + D
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGME---SEALELCKEMLAEGITFTSYSLPLCISS 455
A K F D ++++I Y + G + EAL + ++M I + + + +
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 456 CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIY 515
+ L ++ + KQ H K G N D++ GS++ID+Y+ C ++DS+ VFD + VI+
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY 575
N+M GY + ++A+ +F L+ + P++ TF M++A + ++ F L
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE-FHCQLL 582
Query: 576 KYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESA--WRTLLSACRNHNNTKIGEK 633
K ++ + L+D Y + G E+A++ S W +++S+ NH K +
Sbjct: 583 KRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQ 642
Query: 634 SAKKMI 639
+KM+
Sbjct: 643 MLEKMM 648
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/686 (33%), Positives = 371/686 (54%), Gaps = 12/686 (1%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
+W +IS + +A +LF DM V+ P Y FS +L AC +G Q+HG++
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMV 127
++ G D + ++LV +Y + G NL A +F ++ +RD V +N +I+G +Q G
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLG-NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 128 QRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVD 184
LF M ++GL+PD+ T SL+ CS G + Q+H +K G ++ + A+++
Sbjct: 374 MELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432
Query: 185 LYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHV 244
LYAKC D+ + F E ++ +W+ ++ Y + + + F+ M + + P+Q+
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 245 LSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRID 304
S L+ C+ + DL G Q+H Q+IK Q + +V SVL+ +YA G L A + R
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 305 DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG 364
KD+V+W +MI + Q Q L R ++ L + +C L G
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR--GIRSDEVGLTNAVSACAGLQALKEG 610
Query: 365 RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQN 424
+QIH+ S S NALV +YS CG+I +++ AF D+ +W++++ ++Q+
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQS 670
Query: 425 GMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVG 484
G EAL + M EGI +++ + + S+ + GKQ H K+GY+ + V
Sbjct: 671 GNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC 730
Query: 485 SSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVT 544
+++I MYAKCG + D++K F NEV +NA+I Y+ HG +A++ F + + V
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVR 790
Query: 545 PNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQ 604
PN VT + +LSACSH G ++ + F M +Y + P+ EHY C+VD RAG L A +
Sbjct: 791 PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKE 850
Query: 605 IVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGK 661
+Q+ WRTLLSAC H N +IGE +A ++EL P D A+Y+LLSN+Y K
Sbjct: 851 FIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKK 910
Query: 662 WEEARD-CREKMAKTGVKKDPGSSWL 686
W +ARD R+KM + GVKK+PG SW+
Sbjct: 911 W-DARDLTRQKMKEKGVKKEPGQSWI 935
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/650 (28%), Positives = 321/650 (49%), Gaps = 15/650 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPAL-WNV 59
MP R + TW +I + + F LF M + PNE TFS +L AC ++ ++V
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
QIH ++ GL + L+ +YS NG + A VF L +D +W MISG +
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGF-VDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST-----LGEVMQIHGLASKFGAET 174
+ RLF +M+ V G+ P F S+L C +GE Q+HGL K G +
Sbjct: 265 KNECEAEAIRLFCDMY-VLGIMPTPYAFSSVLSACKKIESLEIGE--QLHGLVLKLGFSS 321
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
D V +A+V LY G++ S IF +M ++D ++++I+G + GE+A+ FK M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
++PD + L+S + AC L G Q+H K G ++ + LL LYA +
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
A F + +++V WN M++A+ L S ++ +++ + Q T +ILK+
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLL-DDLRNSFRIFRQMQIEEIVPNQ-YTYPSILKT 499
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
C DL G QIHS ++K++ V + L+ MY++ G++ A+ + KD SW
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+++I Y Q + +AL ++ML GI L +S+C+ L A+ G+Q H A
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
SG++ D+ ++++ +Y++CG +E+S F+ + + +NA++ G+ G ++A+ +
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
F + + G+ N TF + + A S ++ + ++ K E+E + L+ Y
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT-KTGYDSETEVCNALISMYA 738
Query: 595 RAGRLEEAYQ--IVQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELN 642
+ G + +A + + +E +W +++A H S +MI N
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/612 (27%), Positives = 289/612 (47%), Gaps = 15/612 (2%)
Query: 38 RPNEYTFSVLLRAC-ATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDA 96
RPN T LL C T + G ++H +++ GL+ + L Y G +L A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG-DLYGA 139
Query: 97 CCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS- 155
VF ++ ER + WN MI A V LF M E + P+ TF +L+ C
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS-ENVTPNEGTFSGVLEACRG 198
Query: 156 ---TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSS 212
V QIH G VV + ++DLY++ G V R++FD + KD+ W +
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 213 IISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG 272
+ISG + N EA+ F DM + P + SS L AC +IE L G Q+HG ++K G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 273 HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLL 332
+D +V + L++LY + G L AE +F + +D V +N++I +Q G G ++M+L
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG-EKAMELF 377
Query: 333 QELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSE 392
+ +H L+ TL +++ +C L G+Q+H+ K + + AL+++Y++
Sbjct: 378 KRMH-LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 393 CGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC 452
C I A F++ ++ W+ ++ Y + + ++M E I Y+ P
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 453 ISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNE 512
+ +C +L + +G+Q H IK+ + + YV S +IDMYAK G ++ + + +
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 513 VIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTL 572
V + MI GY + +A+ F + G+ ++V +SAC+ +++ +
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 573 MLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKD--GSESAWRTLLSACRNHNNTKI 630
+ + LV Y R G++EE+Y ++ G AW L+S + N
Sbjct: 617 ACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN-- 673
Query: 631 GEKSAKKMIELN 642
E++ + + +N
Sbjct: 674 -EEALRVFVRMN 684
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/530 (26%), Positives = 272/530 (51%), Gaps = 9/530 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R+ VT+ TLI+ + G KA +LF M + P+ T + L+ AC+ G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+H + G + +L+ +Y+ +++ A F + ++V WNVM+ +
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYA-KCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
+ D R+F +M ++E + P+ T+ S+LK C LG++ QIH K + +A
Sbjct: 468 LDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V S ++D+YAK G + + I KD W+++I+GYT N ++A+ F+ M +
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
++ D+ L++ + AC ++ L G Q+H Q +G +D + L+TLY+ G + ++
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
F + + D +AWN+++ Q G + ++++ ++R + T + +K+
Sbjct: 647 LAFEQTEAGDNIAWNALVSGFQQSGN-NEEALRVFVRMNR-EGIDNNNFTFGSAVKAASE 704
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
+++ G+Q+H+++ K+ T V NAL+ MY++CG I DA K F+++ K++ SW++I
Sbjct: 705 TANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAI 764
Query: 418 IGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQFHVFAIKSG 476
I Y ++G SEAL+ +M+ + +L +S+CS + ++ G F + G
Sbjct: 765 INAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 824
Query: 477 YNHDVYVGSSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMICGYAHH 525
+ ++DM + G + +K+ + + +KP+ +++ ++ H
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 874
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 232/483 (48%), Gaps = 49/483 (10%)
Query: 238 VKPDQHVLSSTLRACVEIE-DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
++P+ L L C++ L+ G ++H Q++K G ++ ++ L Y G L A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQ---LGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
K+F + ++ I WN MI A +G+ ++++ E ++ T +L+
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSE-----NVTPNEGTFSGVLE 194
Query: 354 SCKNKS-DLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS 412
+C+ S QIH+ ++ + T+V N L+ +YS G + A + F + KD S
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFA 472
SW ++I +N E+EA+ L +M GI T Y+ +S+C ++ ++ +G+Q H
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 473 IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAI 532
+K G++ D YV ++++ +Y G++ ++ +F + + V YN +I G + G ++A+
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 533 EIFTMLEKNGVTPNQVTFLAMLSACSHAG--YIEDTLNLFT---------------LMLY 575
E+F + +G+ P+ T +++ ACS G + L+ +T L LY
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 576 ----------KYKIKPESEH---YSCLVDAYGRAGRLEEAYQIVQKDGSES------AWR 616
Y ++ E E+ ++ ++ AYG L +++I ++ E +
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 617 TLLSACRNHNNTKIGEKSAKKMIELNPSDHASYI--LLSNIYIEEGKWEEARDCREKMAK 674
++L C + ++GE+ ++I+ N +A Y+ +L ++Y + GK + A D + A
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNA-YVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 675 TGV 677
V
Sbjct: 554 KDV 556
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/715 (31%), Positives = 395/715 (55%), Gaps = 36/715 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+VV+W +++S +L+ G K+ ++F DM + TF+++L+ C+ ++G
Sbjct: 140 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 199
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+QIHG++VR G + D A S+L+ MY+ G ++ VF + E++ V+W+ +I+G Q
Sbjct: 200 MQIHGIVVRVGCDTDVVAASALLDMYAK-GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQ 258
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV-----MQIHGLASKFGAETD 175
+ + F EM +V + S+L+ C+ L E+ + H L S F A D
Sbjct: 259 NNLLSLALKFFKEMQKVNA-GVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAA--D 315
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
+V +A +D+YAKC ++ + +FD+ E + ++++I+GY+ G +A+ F +
Sbjct: 316 GIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMS 375
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+ D+ LS RAC ++ L+ G+Q++G IK+ D VA+ + +Y L +
Sbjct: 376 SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAE 435
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A ++F + +D V+WN++I AH Q G+G + L + ++ T +ILK+C
Sbjct: 436 AFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR--SRIEPDEFTFGSILKAC 493
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS-- 413
S L G +IHS ++KS ++ + VG +L+ MYS+CG I +A K + + S
Sbjct: 494 TGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT 552
Query: 414 ------------------WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS 455
W+SII Y +A L M+ GIT ++ + +
Sbjct: 553 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 612
Query: 456 CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIY 515
C+ L + +GKQ H IK DVY+ S+++DMY+KCG + DS+ +F+ ++ + V +
Sbjct: 613 CANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTW 672
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY 575
NAMICGYAHHG+ ++AI++F + + PN VTF+++L AC+H G I+ L F +M
Sbjct: 673 NAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 732
Query: 576 KYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNH-NNTKIG 631
Y + P+ HYS +VD G++G+++ A +++++ + + WRTLL C H NN ++
Sbjct: 733 DYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVA 792
Query: 632 EKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
E++ ++ L+P D ++Y LLSN+Y + G WE+ D R M +KK+PG SW+
Sbjct: 793 EEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 193/707 (27%), Positives = 340/707 (48%), Gaps = 70/707 (9%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R+VV++ ++ + VP +F F D + FS + + CA +G Q
Sbjct: 12 RSVVSFNRCLTEKISYRRVP-SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
H ++ SG F + L+ +Y+N+ + A VF + RD+V+WN MI+G+++ D
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNS-RDFVSASMVFDKMPLRDVVSWNKMINGYSKSND 129
Query: 124 FCMVQRLFSEM-------W-----------------EV------EGLKPDNRTFVSLLKC 153
F+ M W EV EG++ D RTF +LK
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 154 CSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
CS L + MQIHG+ + G +TD V +SA++D+YAK ++F + EK++ W
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
S+II+G NN A+ FFK+M K Q + +S LR+C + +L G Q+H +K
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309
Query: 271 NGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQ 330
+ D V + L +YA ++DA+ LF ++ + ++N+MI ++Q G +
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG----FK 365
Query: 331 LLQELHR--TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVH 388
L HR ++ L +L + ++C L G QI+ L +KSS+S V NA +
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425
Query: 389 MYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYS 448
MY +C + +AF+ F ++ +D SW++II ++QNG E L L ML I ++
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 449 LPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV----- 503
+ +C+ ++ G + H +KSG + VG S+IDMY+KCG +E+++K+
Sbjct: 486 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544
Query: 504 ---------------FDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQV 548
+ +++ V +N++I GY Q++ A +FT + + G+TP++
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 604
Query: 549 TFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSC--LVDAYGRAGRLEEAYQIV 606
T+ +L C++ + ++ K + +S+ Y C LVD Y + G L ++ +
Sbjct: 605 TYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDSRLMF 661
Query: 607 QKDGSES--AWRTLLSACRNHNNTKIGEKSAKKMIELN-PSDHASYI 650
+K W ++ +H + + ++MI N +H ++I
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 708
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/701 (32%), Positives = 387/701 (55%), Gaps = 27/701 (3%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
W L+ S +R+ + +A + DM V+ +P+ Y F LL+A A +G QIH +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 69 RSGLERDKFA-GSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMV 127
+ G D ++LV +Y G + VF + ER+ V+WN +IS + M
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 128 QRLFSEMWEVEGLKPDNRTFVSLLKCCSTL----GEVM--QIHGLASKFGAETDAVVSSA 181
F M + E ++P + T VS++ CS L G +M Q+H + G E ++ + +
Sbjct: 184 LEAFRCMLD-ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINT 241
Query: 182 MVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPD 241
+V +Y K G ++S + + S +D W++++S N + EA+ + ++M + V+PD
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQND-CFVASVLLTLYANFGGLRDAEKLF 300
+ +SS L AC +E L TG ++H +KNG ++ FV S L+ +Y N + ++F
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
+ D+ I WN+MI ++Q + ++ L + + L T+ ++ +C
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQ-NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
IH V+K + V N L+ MYS G+I A + F + +D +W+++I
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 421 YKQNGMESEALELCKEM------LAEG-----ITFTSYSLPLCISSCSQLLAINVGKQFH 469
Y + +AL L +M +++G + S +L + SC+ L A+ GK+ H
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 470 VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAK 529
+AIK+ DV VGS+++DMYAKCG ++ S+KVFD + N + +N +I Y HG +
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 530 QAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCL 589
+AI++ M+ GV PN+VTF+++ +ACSH+G +++ L +F +M Y ++P S+HY+C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 590 VDAYGRAGRLEEAYQIVQ---KDGSES-AWRTLLSACRNHNNTKIGEKSAKKMIELNPSD 645
VD GRAGR++EAYQ++ +D +++ AW +LL A R HNN +IGE +A+ +I+L P+
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 646 HASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ Y+LL+NIY G W++A + R M + GV+K+PG SW+
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 263/520 (50%), Gaps = 21/520 (4%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACAT---PALWNVG 60
RN V+W +LISS A + F M + P+ +T ++ AC+ P +G
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+H +R G E + F ++LV MY G L + + RDLV WN ++S Q
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYGKLG-KLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGA-ETDA 176
EM +EG++PD T S+L CS L + ++H A K G+ + ++
Sbjct: 280 NEQLLEALEYLREM-VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V SA+VD+Y C V S R++FD M ++ +W+++I+GY+ N +EA+ F M +
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 237 R-VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+ + ++ + ACV + +HG ++K G D FV + L+ +Y+ G +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 296 AEKLFRRIDDKDIVAWNSMILAH--AQLGQGSSRSMQLLQELHRT-------TSLQIQGA 346
A ++F +++D+D+V WN+MI + ++ + + + +Q L R SL+
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI 406
TL+ IL SC S L G++IH+ +K++++ VG+ALV MY++CG + + K F I
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 407 VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG- 465
K+ +W+ II Y +G EA++L + M+ +G+ + ++CS ++ G
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 466 KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD 505
+ F+V G + ++D+ + G ++++ ++ +
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 678
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 221/444 (49%), Gaps = 24/444 (5%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R++VTW T++SS + + +A + +M + P+E+T S +L AC+ + G ++
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 64 HGVLVRSG-LERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
H +++G L+ + F GS+LV MY N L VF + +R + WN MI+G++Q
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVL-SGRRVFDGMFDRKIGLWNAMIAGYSQNE 383
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVS 179
LF M E GL ++ T ++ C G + IHG K G + D V
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 443
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM------ 233
+ ++D+Y++ G + +IF ME++D W+++I+GY + E+A+ M
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 234 -----CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
+ +KP+ L + L +C + L G ++H IKN D V S L+ +YA
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 289 NFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATL 348
G L+ + K+F +I K+++ WN +I+A+ G G ++ LL+ + ++ T
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG-QEAIDLLR-MMMVQGVKPNEVTF 621
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAFVDIV 407
I++ +C + + G +I ++ P+ A +V + G+I +A++ ++++
Sbjct: 622 ISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ-LMNMM 680
Query: 408 CKD---DSSWSSIIGTYK-QNGME 427
+D +WSS++G + N +E
Sbjct: 681 PRDFNKAGAWSSLLGASRIHNNLE 704
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 19/241 (7%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-----------RPNEYTFSVLLR 49
M R++VTW T+I+ ++ + A L + M+ ++ +PN T +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 50 ACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLV 109
+CA + G +IH +++ L D GS+LV MY+ G L+ + VF + +++++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC-LQMSRKVFDQIPQKNVI 584
Query: 110 AWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHG 165
WNV+I + G+ L M V+G+KP+ TF+S+ CS G V + +
Sbjct: 585 TWNVIIMAYGMHGNGQEAIDLL-RMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYV 643
Query: 166 LASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN--FVWSSIISGYTVNNRG 223
+ +G E + + +VDL + G + ++ + M N WSS++ ++N
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703
Query: 224 E 224
E
Sbjct: 704 E 704
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/699 (31%), Positives = 381/699 (54%), Gaps = 22/699 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNVGLQ 62
+N+ W +ISS+ R + + F +M D P+ +T+ +++ACA + +GL
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
+HG++V++GL D F G++LV Y +G + DA +F + ER+LV+WN MI F+ G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGF-VTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 123 DFCMVQRLFSEMWEVEG---LKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDA 176
L EM E G PD T V++L C+ E+ +HG A K + +
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK- 235
V+++A++D+Y+KCG +++ + IF K+ W++++ G++ + M
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 236 -QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ VK D+ + + + C L + ++H +K + VA+ + YA G L
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELH---RTTSLQIQGATLIAI 351
A+++F I K + +WN++I HAQ S +L + H + + L T+ ++
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQ-----SNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
L +C L G+++H ++++ + V +++ +Y CG++ F + K
Sbjct: 503 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
SW+++I Y QNG AL + ++M+ GI S+ +CS L ++ +G++ H +
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 622
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
A+K D ++ S+IDMYAK G + S KVF+ + + +NAMI GY HG AK+A
Sbjct: 623 ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 682
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
I++F +++ G P+ +TFL +L+AC+H+G I + L M + +KP +HY+C++D
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 742
Query: 592 AYGRAGRLEEAYQIVQKDGSESA----WRTLLSACRNHNNTKIGEKSAKKMIELNPSDHA 647
GRAG+L++A ++V ++ SE A W++LLS+CR H N ++GEK A K+ EL P
Sbjct: 743 MLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE 802
Query: 648 SYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+Y+LLSN+Y GKWE+ R R++M + ++KD G SW+
Sbjct: 803 NYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/651 (24%), Positives = 313/651 (48%), Gaps = 20/651 (3%)
Query: 13 ISSHLRAGSVPKAFQLFNDMRVMDERPNEY------TFSVLLRACATPALWNVGLQIHGV 66
IS+ G + K+F+ + DE ++ +LL+A +G +IH +
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 67 LVRSG-LERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFC 125
+ S L D + ++ MY+ GS D+ VF L ++L WN +IS +++ +
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSP-DDSRFVFDALRSKNLFQWNAVISSYSRNELYD 168
Query: 126 MVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAM 182
V F EM L PD+ T+ ++K C+ + +V + +HGL K G D V +A+
Sbjct: 169 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNAL 228
Query: 183 VDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR----V 238
V Y G V+ ++FD M E++ W+S+I ++ N EE+ +M ++
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF 288
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK 298
PD L + L C ++ G VHG +K + + + L+ +Y+ G + +A+
Sbjct: 289 MPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQM 348
Query: 299 LFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
+F+ ++K++V+WN+M+ + G L Q L ++ T++ + C ++
Sbjct: 349 IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE 408
Query: 359 SDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII 418
S LP+ +++H +K + LV NA V Y++CG + A + F I K +SW+++I
Sbjct: 409 SFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI 468
Query: 419 GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN 478
G + Q+ +L+ +M G+ S+++ +S+CS+L ++ +GK+ H F I++
Sbjct: 469 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 528
Query: 479 HDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML 538
D++V S++ +Y CG + + +FDA + V +N +I GY +G +A+ +F +
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 539 EKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGR 598
G+ ++ + + ACS + L K+ ++ ++ L+D Y + G
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL-KHLLEDDAFIACSLIDMYAKNGS 647
Query: 599 LEEAYQIVQ--KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIEL--NPSD 645
+ ++ ++ K+ S ++W ++ H K K ++M NP D
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 257/518 (49%), Gaps = 24/518 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER------PNEYTFSVLLRACATP 54
MP RN+V+W ++I G ++F L +M M+E P+ T +L CA
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEM--MEENGDGAFMPDVATLVTVLPVCARE 305
Query: 55 ALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVM 114
+G +HG V+ L+++ ++L+ MYS G + +A +F +++V+WN M
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC-ITNAQMIFKMNNNKNVVSWNTM 364
Query: 115 ISGFAQVGDFCMVQRLFSEMWE-VEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKF 170
+ GF+ GD + +M E +K D T ++ + C S L + ++H + K
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 424
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFF 230
+ +V++A V YAKCG +S +++F + K W+++I G+ +N ++
Sbjct: 425 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 484
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
M + PD + S L AC +++ L G +VHG +I+N + D FV +L+LY +
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 544
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
G L + LF ++DK +V+WN++I + Q G R++ + +++ +Q+ G +++
Sbjct: 545 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGF-PDRALGVFRQM-VLYGIQLCGISMMP 602
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD 410
+ +C L GR+ H+ +K + + +L+ MY++ G I + K F + K
Sbjct: 603 VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKS 662
Query: 411 DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF-- 468
+SW+++I Y +G+ EA++L +EM G + +++C+ I+ G ++
Sbjct: 663 TASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLD 722
Query: 469 ---HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
F +K H + +IDM + G ++ + +V
Sbjct: 723 QMKSSFGLKPNLKH----YACVIDMLGRAGQLDKALRV 756
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/686 (32%), Positives = 381/686 (55%), Gaps = 17/686 (2%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
NV W T+I+ LR + F LF++M V ++P+ YT+S +L ACA+ G +
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQ 274
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
+++ G E D F +++V +Y+ G ++ +A VF + +V+W VM+SG+ + D
Sbjct: 275 ARVIKCGAE-DVFVCTAIVDLYAKCG-HMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDA 332
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFGAETDAVVSSA 181
+F EM G++ +N T S++ C S + E Q+H K G D+ V++A
Sbjct: 333 FSALEIFKEMRH-SGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAA 391
Query: 182 MVDLYAKCGDVSSCRKIFDSME--EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
++ +Y+K GD+ ++F+ ++ ++ N V + +I+ ++ + + +A+ F M ++ ++
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
D+ + S L ++ LN G QVHG +K+G D V S L TLY+ G L ++ KL
Sbjct: 451 TDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 300 FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKS 359
F+ I KD W SMI + G + L TS +TL A+L C +
Sbjct: 508 FQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTS--PDESTLAAVLTVCSSHP 565
Query: 360 DLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIG 419
LP G++IH +++ + +G+ALV+MYS+CG + A + + + D S SS+I
Sbjct: 566 SLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLIS 625
Query: 420 TYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH 479
Y Q+G+ + L ++M+ G T S+++ + + + ++G Q H + K G
Sbjct: 626 GYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCT 685
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLE 539
+ VGSS++ MY+K G ++D K F P+ + + A+I YA HG+A +A++++ +++
Sbjct: 686 EPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMK 745
Query: 540 KNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRL 599
+ G P++VTF+ +LSACSH G +E++ M+ Y I+PE+ HY C+VDA GR+GRL
Sbjct: 746 EKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRL 805
Query: 600 EEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIY 656
EA + W TLL+AC+ H ++G+ +AKK IEL PSD +YI LSNI
Sbjct: 806 REAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNIL 865
Query: 657 IEEGKWEEARDCREKMAKTGVKKDPG 682
E G+W+E + R+ M TGV+K+PG
Sbjct: 866 AEVGEWDEVEETRKLMKGTGVQKEPG 891
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 286/557 (51%), Gaps = 24/557 (4%)
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
LQ H +L R L D F SL+ YSN+GS + DA +F + + D+V+ N+MISG+ Q
Sbjct: 70 LQAH-LLRRYLLPFDVFLTKSLLSWYSNSGS-MADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL-----GEVMQIHGLASKFGAETD 175
F R FS+M G + + ++ S++ CS L E++ H + K G
Sbjct: 128 HRLFEESLRFFSKM-HFLGFEANEISYGSVISACSALQAPLFSELVCCHTI--KMGYFFY 184
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
VV SA++D+++K K+F + + W++II+G N F +MC
Sbjct: 185 EVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCV 244
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
KPD + SS L AC +E L G V ++IK G + D FV + ++ LYA G + +
Sbjct: 245 GFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAE 303
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A ++F RI + +V+W M+ + + S ++++ +E+ R + ++I T+ +++ +C
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFS-ALEIFKEM-RHSGVEINNCTVTSVISAC 361
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
S + Q+H+ V KS + V AL+ MYS+ G I + + F D+ DD
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL---DDIQRQ 418
Query: 416 SI----IGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
+I I ++ Q+ +A+ L ML EG+ +S+ S S L +N+GKQ H +
Sbjct: 419 NIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSV---CSLLSVLDCLNLGKQVHGY 475
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
+KSG D+ VGSS+ +Y+KCG +E+S K+F + + +MI G+ +G ++A
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA 535
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
I +F+ + +G +P++ T A+L+ CS + + L + I + S LV+
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL-RAGIDKGMDLGSALVN 594
Query: 592 AYGRAGRLEEAYQIVQK 608
Y + G L+ A Q+ +
Sbjct: 595 MYSKCGSLKLARQVYDR 611
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 272/549 (49%), Gaps = 24/549 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P+ +VV+WT ++S + ++ A ++F +MR N T + ++ AC P++
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGS-NLRDACCVFHDL--LERDLVAWNVMISG 117
Q+H + +SG D ++L+ MYS +G +L + VF DL ++R + NVMI+
Sbjct: 371 SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQ--VFEDLDDIQRQNIV-NVMITS 427
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAV 177
F+Q RLF+ M + EGL+ D + SLL L Q+HG K G D
Sbjct: 428 FSQSKKPGKAIRLFTRMLQ-EGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLT 486
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V S++ LY+KCG + K+F + KDN W+S+ISG+ EA+ F +M
Sbjct: 487 VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG 546
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
PD+ L++ L C L G ++HG ++ G + S L+ +Y+ G L+ A
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLAR 606
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
+++ R+ + D V+ +S+I ++Q G + LL + + + +ILK+
Sbjct: 607 QVYDRLPELDPVSCSSLISGYSQ--HGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAAL 664
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
+ G Q+H+ + K + VG++L+ MYS+ G I D KAF I D +W+++
Sbjct: 665 SDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTAL 724
Query: 418 IGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGY 477
I +Y Q+G +EAL++ M +G + +S+CS + FH+ ++ Y
Sbjct: 725 IASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVE-ESYFHLNSMVKDY 783
Query: 478 NHDV----YVGSSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMICGYAHHGQ----- 527
+ YV ++D + G + +++ + + +KP+ +++ ++ HG+
Sbjct: 784 GIEPENRHYV--CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGK 841
Query: 528 --AKQAIEI 534
AK+AIE+
Sbjct: 842 VAAKKAIEL 850
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 14/272 (5%)
Query: 380 TLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLA 439
+ +L+ YS G + DA K F I D S + +I YKQ+ + E+L +M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 440 EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMED 499
G S IS+CS L A + IK GY V S++ID+++K ED
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 500 SKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSH 559
+ KVF + N +N +I G + ++F + P+ T+ ++L+AC+
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 560 AGYIEDTLNLFTLMLYKYKIKPESEHY---SCLVDAYGRAGRLEEAYQIVQK--DGSESA 614
+ F ++ IK +E + +VD Y + G + EA ++ + + S +
Sbjct: 264 LEKLR-----FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 615 WRTLLSACRNHNNTKIGEKSAKKM----IELN 642
W +LS N+ + K+M +E+N
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEIN 350
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/695 (33%), Positives = 366/695 (52%), Gaps = 14/695 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M +VV W +IS H + G A + F +MR + T +L A A ++G
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
L +H ++ GL + + GSSLV MYS + A VF L E++ V WN MI G+A
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKC-EKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
G+ V LF +M + G D+ TF SLL C+ ++ Q H + K +
Sbjct: 406 NGESHKVMELFMDM-KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V +A+VD+YAKCG + R+IF+ M ++DN W++II Y + EA FK M
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
+ D L+STL+AC + L G QVH +K G D S L+ +Y+ G ++DA
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
K+F + + +V+ N++I ++Q ++ L QE+ T + T I+++C
Sbjct: 585 KVFSSLPEWSVVSMNALIAGYSQ--NNLEEAVVLFQEM-LTRGVNPSEITFATIVEACHK 641
Query: 358 KSDLPAGRQIHSLVMKSSVS-HPTLVGNALVHMYSECGQIGDAFKAFVDIVC-KDDSSWS 415
L G Q H + K S +G +L+ MY + +A F ++ K W+
Sbjct: 642 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWT 701
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS 475
++ + QNG EAL+ KEM +G+ + + CS L ++ G+ H
Sbjct: 702 GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL 761
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVKPNEVIYNAMICGYAHHGQAKQAIEI 534
++ D +++IDMYAKCG M+ S +VFD + + N V +N++I GYA +G A+ A++I
Sbjct: 762 AHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKI 821
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
F + ++ + P+++TFL +L+ACSHAG + D +F +M+ +Y I+ +H +C+VD G
Sbjct: 822 FDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLG 881
Query: 595 RAGRLEEAYQIVQKDG---SESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYIL 651
R G L+EA ++ W +LL ACR H + GE SA+K+IEL P + ++Y+L
Sbjct: 882 RWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVL 941
Query: 652 LSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
LSNIY +G WE+A R+ M GVKK PG SW+
Sbjct: 942 LSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWI 976
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/556 (30%), Positives = 296/556 (53%), Gaps = 41/556 (7%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
++V W +++S + G K + F + PN++TFS++L CA G QI
Sbjct: 123 KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQI 182
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
H +++ GLER+ + G +LV MY+ + DA VF +++ + V W + SG+ + G
Sbjct: 183 HCSMIKMGLERNSYCGGALVDMYA-KCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMV 183
+F M + EG +PD+ FV++ +
Sbjct: 242 PEEAVLVFERMRD-EGHRPDHLAFVTV--------------------------------I 268
Query: 184 DLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEE--AVHFFKDMCKQRVKPD 241
+ Y + G + R +F M D W+ +ISG+ RG E A+ +F +M K VK
Sbjct: 269 NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH--GKRGCETVAIEYFFNMRKSSVKST 326
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR 301
+ L S L A + +L+ G+ VH + IK G ++ +V S L+++Y+ + A K+F
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 302 RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
+++K+ V WN+MI +A G+ S + M+L ++ +++ I T ++L +C DL
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGE-SHKVMELFMDM-KSSGYNIDDFTFTSLLSTCAASHDL 444
Query: 362 PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTY 421
G Q HS+++K ++ VGNALV MY++CG + DA + F + +D+ +W++IIG+Y
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSY 504
Query: 422 KQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDV 481
Q+ ESEA +L K M GI L + +C+ + + GKQ H ++K G + D+
Sbjct: 505 VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDL 564
Query: 482 YVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKN 541
+ GSS+IDMY+KCG ++D++KVF + + + V NA+I GY+ + ++A+ +F +
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTR 623
Query: 542 GVTPNQVTFLAMLSAC 557
GV P+++TF ++ AC
Sbjct: 624 GVNPSEITFATIVEAC 639
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/625 (26%), Positives = 302/625 (48%), Gaps = 49/625 (7%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N V WT L S +++AG +A +F MR RP+ F ++
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI---------------- 268
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
+R G L+DA +F ++ D+VAWNVMISG + G
Sbjct: 269 NTYIRLG--------------------KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCE 308
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSA 181
+ F M + +K T S+L + + + +H A K G ++ V S+
Sbjct: 309 TVAIEYFFNMRK-SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 182 MVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPD 241
+V +Y+KC + + K+F+++EEK++ W+++I GY N + + F DM D
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR 301
+S L C DL G Q H +IK + FV + L+ +YA G L DA ++F
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Query: 302 RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
R+ D+D V WN++I ++ Q + S + L + ++ + GA L + LK+C + L
Sbjct: 488 RMCDRDNVTWNTIIGSYVQ-DENESEAFDLFKRMN-LCGIVSDGACLASTLKACTHVHGL 545
Query: 362 PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTY 421
G+Q+H L +K + G++L+ MYS+CG I DA K F + S +++I Y
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY 605
Query: 422 KQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD- 480
QN +E EA+ L +EML G+ + + + +C + ++ +G QFH K G++ +
Sbjct: 606 SQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEG 664
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNE-VIYNAMICGYAHHGQAKQAIEIFTMLE 539
Y+G S++ MY M ++ +F P V++ M+ G++ +G ++A++ + +
Sbjct: 665 EYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR 724
Query: 540 KNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRL 599
+GV P+Q TF+ +L CS + + + +L+ + E + L+D Y + G +
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS-NTLIDMYAKCGDM 783
Query: 600 EEAYQI---VQKDGSESAWRTLLSA 621
+ + Q+ +++ + +W +L++
Sbjct: 784 KGSSQVFDEMRRRSNVVSWNSLING 808
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/582 (25%), Positives = 277/582 (47%), Gaps = 55/582 (9%)
Query: 27 QLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMY 86
+LF +V DE P ++ +G +H + G++ + G+++V +Y
Sbjct: 57 KLFKSRKVFDEMPQRLALAL-----------RIGKAVHSKSLILGIDSEGRLGNAIVDLY 105
Query: 87 SNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRT 146
+ + + A F D LE+D+ AWN M+S ++ +G V R F ++E + + P+ T
Sbjct: 106 AKC-AQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ-IFPNKFT 162
Query: 147 FVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
F +L C+ V QIH K G E ++ A+VD+YAKC +S R++F+ +
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 204 EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
+ + W+ + SGY EEAV F+
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFE-------------------------------- 250
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ 323
+M GH+ D ++ Y G L+DA LF + D+VAWN MI H + G
Sbjct: 251 ---RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG- 306
Query: 324 GSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG 383
+ +++ + R +S++ +TL ++L + ++L G +H+ +K ++ VG
Sbjct: 307 CETVAIEYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVG 365
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT 443
++LV MYS+C ++ A K F + K+D W+++I Y NG + +EL +M + G
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 444 FTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
++ +S+C+ + +G QFH IK +++VG++++DMYAKCG +ED++++
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 504 FDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI 563
F+ + V +N +I Y +A ++F + G+ + + L AC+H +
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 564 EDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI 605
+ L + K + + S L+D Y + G +++A ++
Sbjct: 546 YQGKQVHCLSV-KCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 460 LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMI 519
LA+ +GK H ++ G + + +G++I+D+YAKC + ++K FD ++ + +N+M+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF-LEKDVTAWNSML 132
Query: 520 CGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKI 579
Y+ G+ + + F L +N + PN+ TF +LS C+ +E + M+ K +
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI-KMGL 191
Query: 580 KPESEHYSCLVDAYGRAGRLEEAYQIVQ--KDGSESAWRTLLSACRNHNNTKIGEKSA-- 635
+ S LVD Y + R+ +A ++ + D + W L S + + E++
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG---YVKAGLPEEAVLV 248
Query: 636 --KKMIELNPSDHASYILLSNIYIEEGKWEEAR 666
+ E + DH +++ + N YI GK ++AR
Sbjct: 249 FERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/695 (33%), Positives = 383/695 (55%), Gaps = 20/695 (2%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P R+ ++ +L+ R G +A +LF ++ + + FS +L+ AT G
Sbjct: 54 PGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGR 113
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
Q+H ++ G D G+SLV Y GSN +D VF ++ ER++V W +ISG+A+
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMK-GSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETDAVV 178
V LF M + EG +P++ TF + L + G +Q+H + K G + V
Sbjct: 173 SMNDEVLTLFMRM-QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
S+++++LY KCG+V R +FD E K W+S+ISGY N EA+ F M V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK 298
+ + +S ++ C +++L Q+H ++K G D + + L+ Y+ + DA +
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 299 LFRRID-DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
LF+ I ++V+W +MI Q G ++ L E+ R ++ T IL +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQ-NDGKEEAVDLFSEMKRK-GVRPNEFTYSVILTA--- 406
Query: 358 KSDLP--AGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
LP + ++H+ V+K++ + VG AL+ Y + G++ +A K F I KD +WS
Sbjct: 407 ---LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLA-INVGKQFHVFAIK 474
+++ Y Q G A+++ E+ GI ++ ++ C+ A + GKQFH FAIK
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
S + + V S+++ MYAK G++E +++VF Q + + V +N+MI GYA HGQA +A+++
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
F ++K V + VTF+ + +AC+HAG +E+ F +M+ KI P EH SC+VD Y
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 595 RAGRLEEAYQIVQ---KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYIL 651
RAG+LE+A ++++ + WRT+L+ACR H T++G +A+K+I + P D A+Y+L
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 652 LSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
LSN+Y E G W+E R+ M + VKK+PG SW+
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 266/520 (51%), Gaps = 22/520 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M RNVVTWTTLIS + R + LF M+ +PN +TF+ L A + G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
LQ+H V+V++GL++ +SL+ +Y G N+R A +F + +V WN MISG+A
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCG-NVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAV 177
G +F M + ++ +F S++K C+ L E+ Q+H K+G D
Sbjct: 273 NGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV-WSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ +A++ Y+KC + ++F + N V W+++ISG+ N+ EEAV F +M ++
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
V+P++ S L A I + +VH Q++K ++ V + LL Y G + +A
Sbjct: 392 GVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC- 355
K+F IDDKDIVAW++M+ +AQ G+ + ++++ EL + ++ T +IL C
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGE-TEAAIKMFGELTK-GGIKPNEFTFSSILNVCA 505
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+ + G+Q H +KS + V +AL+ MY++ G I A + F KD SW+
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWN 565
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK- 474
S+I Y Q+G +AL++ KEM + + ++C+ + G+++ ++
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 475 ----SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKP 510
H+ S ++D+Y++ G +E + KV + P
Sbjct: 626 CKIAPTKEHN----SCMVDLYSRAGQLEKAMKVIENMPNP 661
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 227/481 (47%), Gaps = 23/481 (4%)
Query: 151 LKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCR-----KIFDSMEEK 205
++ +T+ + KF + V A V +Y G VSS R +FD +
Sbjct: 1 MRFTTTIWRPPSLENFKPKFRIYANGV---AQVRIYC-FGTVSSSRLYNAHNLFDKSPGR 56
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
D + S++ G++ + R +EA F ++ + ++ D + SS L+ + D G Q+H
Sbjct: 57 DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLH 116
Query: 266 GQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGS 325
Q IK G +D V + L+ Y +D K+F + ++++V W ++I +A+ +
Sbjct: 117 CQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR----N 172
Query: 326 SRSMQLLQELHRTTS--LQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG 383
S + ++L R + Q T A L + G Q+H++V+K+ + V
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT 443
N+L+++Y +CG + A F K +W+S+I Y NG++ EAL + M +
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 444 FTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
+ S I C+ L + +Q H +K G+ D + ++++ Y+KC M D+ ++
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 504 F-DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGY 562
F + N V + AMI G+ + ++A+++F+ +++ GV PN+ T+ +L+A
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412
Query: 563 IEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ--KDGSESAWRTLLS 620
E + K + S + L+DAY + G++EEA ++ D AW +L+
Sbjct: 413 SE-----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467
Query: 621 A 621
Sbjct: 468 G 468
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/627 (35%), Positives = 345/627 (55%), Gaps = 12/627 (1%)
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
+H LV S ++ + LV +Y G N+ A F + RD+ AWN+MISG+ + G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLG-NVALARHTFDHIQNRDVYAWNLMISGYGRAG 131
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAM 182
+ V R FS GL PD RTF S+LK C T+ + +IH LA KFG D V++++
Sbjct: 132 NSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASL 191
Query: 183 VDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQ 242
+ LY++ V + R +FD M +D W+++ISGY + +EA+ + D
Sbjct: 192 IHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DS 247
Query: 243 HVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRR 302
+ S L AC E D N GV +H IK+G +++ FV++ L+ LYA FG LRD +K+F R
Sbjct: 248 VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR 307
Query: 303 IDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLP 362
+ +D+++WNS+I A+ +L + R++ L QE+ R + +Q TLI++ D+
Sbjct: 308 MYVRDLISWNSIIKAY-ELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIR 365
Query: 363 AGRQIHSLVMKSS-VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTY 421
A R + ++ +GNA+V MY++ G + A F + D SW++II Y
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 422 KQNGMESEALELCKEMLAEG-ITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD 480
QNG SEA+E+ M EG I + + +CSQ A+ G + H +K+G D
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK 540
V+V +S+ DMY KCG +ED+ +F + N V +N +I + HG ++A+ +F +
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Query: 541 NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLE 600
GV P+ +TF+ +LSACSH+G +++ F +M Y I P +HY C+VD YGRAG+LE
Sbjct: 546 EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLE 605
Query: 601 EAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYI 657
A + ++ S W LLSACR H N +G+ +++ + E+ P ++LLSN+Y
Sbjct: 606 TALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYA 665
Query: 658 EEGKWEEARDCREKMAKTGVKKDPGSS 684
GKWE + R G++K PG S
Sbjct: 666 SAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 270/536 (50%), Gaps = 23/536 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGS---VPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALW 57
+ +R+V W +IS + RAG+ V + F LF M P+ TF +L+AC T
Sbjct: 112 IQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVIDG 169
Query: 58 NVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISG 117
N +IH + ++ G D + +SL+++YS + + +A +F ++ RD+ +WN MISG
Sbjct: 170 N---KIHCLALKFGFMWDVYVAASLIHLYSRYKA-VGNARILFDEMPVRDMGSWNAMISG 225
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKP-DNRTFVSLLKCCSTLGEV---MQIHGLASKFGAE 173
+ Q G+ L GL+ D+ T VSLL C+ G+ + IH + K G E
Sbjct: 226 YCQSGNAKEALTL------SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
++ VS+ ++DLYA+ G + C+K+FD M +D W+SII Y +N + A+ F++M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG-HQNDCFVASVLLTLYANFGG 292
R++PD L S ++ D+ V G ++ G D + + ++ +YA G
Sbjct: 340 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 399
Query: 293 LRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAIL 352
+ A +F + + D+++WN++I +AQ G +S ++++ + + T +++L
Sbjct: 400 VDSARAVFNWLPNTDVISWNTIISGYAQNGF-ASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS 412
+C L G ++H ++K+ + V +L MY +CG++ DA F I +
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVF 471
W+++I + +G +A+ L KEML EG+ + +S+CS ++ G+ F +
Sbjct: 519 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 578
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVKPNEVIYNAMICGYAHHG 526
G + ++DMY + G +E + K + ++P+ I+ A++ HG
Sbjct: 579 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 206/439 (46%), Gaps = 54/439 (12%)
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
D H L R C +L + +H +++ + + +++ L+ LY G + A F
Sbjct: 56 DVHTL---FRYCT---NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
I ++D+ AWN MI + + G SS ++ ++ L T ++LK+C+ D
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGN-SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 168
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
G +IH L +K V +L+H+YS +G+A F ++ +D SW+++I
Sbjct: 169 ---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 225
Query: 421 YKQNGMESEALELCKEMLA-EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH 479
Y Q+G EAL L + A + +T S +S+C++ N G H ++IK G
Sbjct: 226 YCQSGNAKEALTLSNGLRAMDSVTVVSL-----LSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLE 539
+++V + +ID+YA+ G + D +KVFD + + +N++I Y + Q +AI +F +
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 340
Query: 540 KNGVTPNQVTFLAMLSACSHAG-----------------YIED-TLNLFTLMLYK----- 576
+ + P+ +T +++ S S G ++ED T+ +++Y
Sbjct: 341 LSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 400
Query: 577 ------YKIKPESE--HYSCLVDAYGRAGRLEEA---YQIVQKDG----SESAWRTLLSA 621
+ P ++ ++ ++ Y + G EA Y I++++G ++ W ++L A
Sbjct: 401 DSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPA 460
Query: 622 CRNHNNTKIGEKSAKKMIE 640
C + G K ++++
Sbjct: 461 CSQAGALRQGMKLHGRLLK 479
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 136/266 (51%), Gaps = 25/266 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
+P+ +V++W T+IS + + G +A +++N M E N+ T+ +L AC+
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMIS--G 117
G+++HG L+++GL D F +SL MY G L DA +F+ + + V WN +I+ G
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCG-RLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAE 173
F G+ ++ LF EM + EG+KPD+ TFV+LL CS G V + + + +G
Sbjct: 529 FHGHGEKAVM--LFKEMLD-EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 585
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGE----EAVH 228
MVD+Y + G + + K SM + D +W +++S V+ + + H
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEH 645
Query: 229 FFKDMCKQRVKPDQ---HVLSSTLRA 251
F+ V+P+ HVL S + A
Sbjct: 646 LFE------VEPEHVGYHVLLSNMYA 665
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/698 (32%), Positives = 385/698 (55%), Gaps = 29/698 (4%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R++ W ++I +H G ++ F M + + P+ +T +++ ACA ++VG +
Sbjct: 88 RDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFV 147
Query: 64 HG-VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
HG VL G +R+ G+S VY YS G L+DAC VF ++ +RD+VAW +ISG Q G
Sbjct: 148 HGLVLKHGGFDRNTAVGASFVYFYSKCGF-LQDACLVFDEMPDRDVVAWTAIISGHVQNG 206
Query: 123 D----FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETD 175
+ + ++ S +V+ KP+ RT + CS LG + + +HG A K G +
Sbjct: 207 ESEGGLGYLCKMHSAGSDVD--KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASS 264
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
V S+M Y+K G+ S F + ++D F W+SII+ + EE+ F +M
Sbjct: 265 KFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN 324
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+ + PD V+S + ++ + G HG +I++ D V + LL++Y F L
Sbjct: 325 KGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSV 384
Query: 296 AEKLFRRIDDK-DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
AEKLF RI ++ + AWN+M+ + ++ + + ++L +++ + ++I A+ +++ S
Sbjct: 385 AEKLFCRISEEGNKEAWNTMLKGYGKM-KCHVKCIELFRKI-QNLGIEIDSASATSVISS 442
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS-- 412
C + + G+ +H V+K+S+ V N+L+ +Y + G + A++ F C+ D+
Sbjct: 443 CSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF----CEADTNV 498
Query: 413 -SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
+W+++I +Y +A+ L M++E +S +L + +C ++ G+ H +
Sbjct: 499 ITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRY 558
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
++ + ++ + +++IDMYAKCGH+E S+++FDA + + V +N MI GY HG + A
Sbjct: 559 ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESA 618
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
I +F +E++ V P TFLA+LSAC+HAG +E LF L +++Y +KP +HYSCLVD
Sbjct: 619 IALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF-LKMHQYDVKPNLKHYSCLVD 677
Query: 592 AYGRAGRLEEAYQIV-----QKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDH 646
R+G LEEA V DG W TLLS+C H ++G + A++ + +P +
Sbjct: 678 LLSRSGNLEEAESTVMSMPFSPDG--VIWGTLLSSCMTHGEFEMGIRMAERAVASDPQND 735
Query: 647 ASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
YI+L+N+Y GKWEEA RE M ++GV K G S
Sbjct: 736 GYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 164/639 (25%), Positives = 299/639 (46%), Gaps = 39/639 (6%)
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNG-SNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
+ +++ GL + F S L+ Y++ G NL VFH + RD+ WN +I G
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSR--VFHLVTRRDIFLWNSIIKAHFSNG 104
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL-----GEVMQIHGLASKFGA-ETDA 176
D+ F M + G PD+ T ++ C+ L G +HGL K G + +
Sbjct: 105 DYARSLCFFFSML-LSGQSPDHFTAPMVVSACAELLWFHVGTF--VHGLVLKHGGFDRNT 161
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V ++ V Y+KCG + +FD M ++D W++IISG+ N E + + +CK
Sbjct: 162 AVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGY---LCKM 218
Query: 237 RV------KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
KP+ L +AC + L G +HG +KNG + FV S + + Y+
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
G +A FR + D+D+ +W S+I + A+ G S + E+ + + G +
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGD-MEESFDMFWEM-QNKGMHPDGVVISC 336
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK- 409
++ +P G+ H V++ S + V N+L+ MY + + A K F I +
Sbjct: 337 LINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEG 396
Query: 410 DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFH 469
+ +W++++ Y + + +EL +++ GI S S ISSCS + A+ +GK H
Sbjct: 397 NKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456
Query: 470 VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAK 529
+ +K+ + + V +S+ID+Y K G + + ++F + N + +NAMI Y H Q++
Sbjct: 457 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSE 515
Query: 530 QAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEH---- 585
+AI +F + P+ +T + +L AC + G +E M+++Y + E E
Sbjct: 516 KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER-----GQMIHRYITETEHEMNLSL 570
Query: 586 YSCLVDAYGRAGRLEEAYQIVQKDGSESA--WRTLLSACRNHNNTKIGEKSAKKMIE--L 641
+ L+D Y + G LE++ ++ + A W ++S H + + +M E +
Sbjct: 571 SAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDV 630
Query: 642 NPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
P+ +++ L + G E+ + KM + VK +
Sbjct: 631 KPTG-PTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPN 668
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/551 (23%), Positives = 253/551 (45%), Gaps = 31/551 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMD---ERPNEYTFSVLLRACATPALW 57
MP R+VV WT +IS H++ G M ++PN T +AC+
Sbjct: 187 MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGAL 246
Query: 58 NVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISG 117
G +HG V++GL KF SS+ YS +G N +A F +L + D+ +W +I+
Sbjct: 247 KEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSG-NPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 118 FAQVGDFCMVQRLFSEMWEVE--GLKPDNRTFVSLLKCCSTLGEVMQI------HGLASK 169
A+ GD ++ F WE++ G+ PD L+ + LG++M + HG +
Sbjct: 306 LARSGD---MEESFDMFWEMQNKGMHPDGVVISCLI---NELGKMMLVPQGKAFHGFVIR 359
Query: 170 FGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNF-VWSSIISGYTVNNRGEEAVH 228
D+ V ++++ +Y K +S K+F + E+ N W++++ GY + +
Sbjct: 360 HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIE 419
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F+ + ++ D +S + +C I + G +H ++K V + L+ LY
Sbjct: 420 LFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYG 479
Query: 289 NFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATL 348
G L A ++F D +++ WN+MI ++ Q S +++ L + + + + TL
Sbjct: 480 KMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQ-SEKAIALFDRM-VSENFKPSSITL 536
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
+ +L +C N L G+ IH + ++ + AL+ MY++CG + + + F
Sbjct: 537 VTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQ 596
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF 468
KD W+ +I Y +G A+ L +M + T + +S+C+ + GK+
Sbjct: 597 KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL 656
Query: 469 ----HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMICGYA 523
H + +K H S ++D+ ++ G++E+++ V P+ VI+ ++
Sbjct: 657 FLKMHQYDVKPNLKHY----SCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCM 712
Query: 524 HHGQAKQAIEI 534
HG+ + I +
Sbjct: 713 THGEFEMGIRM 723
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/693 (31%), Positives = 379/693 (54%), Gaps = 19/693 (2%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNV-GLQI 63
++ W ++ISS +R G + +A + M P+ TF L++AC AL N G+
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV--ALKNFKGIDF 159
Query: 64 HGVLVRS-GLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
V S G++ ++F SSL+ Y G + +F +L++D V WNVM++G+A+ G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYG-KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST-----LGEVMQIHGLASKFGAETDAV 177
V + FS M ++ + P+ TF +L C++ LG +Q+HGL G + +
Sbjct: 219 ALDSVIKGFSVM-RMDQISPNAVTFDCVLSVCASKLLIDLG--VQLHGLVVVSGVDFEGS 275
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
+ ++++ +Y+KCG K+F M D W+ +ISGY + EE++ FF +M
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
V PD SS L + + E+L Q+H ++++ D F+ S L+ Y G+ A+
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
+F + + D+V + +MI + G S+++ + L + + TL++IL
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYID-SLEMFRWLVKV-KISPNEITLVSILPVIGI 453
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
L GR++H ++K + +G A++ MY++CG++ A++ F + +D SW+S+
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSM 513
Query: 418 IGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGY 477
I Q+ S A+++ ++M GI + S+ +S+C+ L + + GK H F IK
Sbjct: 514 ITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSL 573
Query: 478 NHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF-T 536
DVY S++IDMYAKCG+++ + VF + N V +N++I +HG+ K ++ +F
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHE 633
Query: 537 MLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRA 596
M+EK+G+ P+Q+TFL ++S+C H G +++ + F M Y I+P+ EHY+C+VD +GRA
Sbjct: 634 MVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRA 693
Query: 597 GRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLS 653
GRL EAY+ V+ W TLL ACR H N ++ E ++ K+++L+PS+ Y+L+S
Sbjct: 694 GRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLIS 753
Query: 654 NIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
N + +WE R M + V+K PG SW+
Sbjct: 754 NAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/614 (27%), Positives = 298/614 (48%), Gaps = 15/614 (2%)
Query: 24 KAFQLFNDMRVMDER-PNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSL 82
K+ L N R ++E P S+LL+AC+ P L G Q+H L+ + + D + +
Sbjct: 19 KSLPLRNSSRFLEETIPRR--LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERI 76
Query: 83 VYMYSNNGSNLRDACCVFH--DLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGL 140
+ MY+ GS D +F+ DL + WN +IS F + G + +M G+
Sbjct: 77 LGMYAMCGS-FSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKML-CFGV 134
Query: 141 KPDNRTFVSLLKCCSTLGEVMQIHGLA---SKFGAETDAVVSSAMVDLYAKCGDVSSCRK 197
PD TF L+K C L I L+ S G + + V+S+++ Y + G + K
Sbjct: 135 SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSK 194
Query: 198 IFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIED 257
+FD + +KD +W+ +++GY + + F M ++ P+ L C
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 258 LNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILA 317
++ GVQ+HG ++ +G + + + LL++Y+ G DA KLFR + D V WN MI
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 318 HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
+ Q G S+ E+ + L T ++L S +L +QIH +M+ S+S
Sbjct: 315 YVQSGL-MEESLTFFYEMISSGVLP-DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEM 437
+ +AL+ Y +C + A F D ++++I Y NG+ ++LE+ + +
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432
Query: 438 LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM 497
+ I+ +L + LLA+ +G++ H F IK G+++ +G ++IDMYAKCG M
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM 492
Query: 498 EDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSAC 557
+ ++F+ K + V +N+MI A AI+IF + +G+ + V+ A LSAC
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 558 SHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ--KDGSESAW 615
++ + M+ K+ + + S L+D Y + G L+ A + + K+ + +W
Sbjct: 553 ANLPSESFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSW 611
Query: 616 RTLLSACRNHNNTK 629
++++AC NH K
Sbjct: 612 NSIIAACGNHGKLK 625
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 146/519 (28%), Positives = 256/519 (49%), Gaps = 17/519 (3%)
Query: 3 HRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQ 62
++ V W +++ + + G++ + F+ MR+ PN TF +L CA+ L ++G+Q
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ 260
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
+HG++V SG++ + +SL+ MYS G DA +F + D V WN MISG+ Q G
Sbjct: 261 LHGLVVVSGVDFEGSIKNSLLSMYSKCG-RFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETDAVVS 179
F EM G+ PD TF SLL S L QIH + D ++
Sbjct: 320 LMEESLTFFYEMIS-SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
SA++D Y KC VS + IF D V++++ISGY N +++ F+ + K ++
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
P++ L S L + L G ++HG +IK G N C + ++ +YA G + A ++
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 300 FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKS 359
F R+ +DIV+WNSMI AQ S ++ + +++ + + ++ A L +C N
Sbjct: 499 FERLSKRDIVSWNSMITRCAQ-SDNPSAAIDIFRQMG-VSGICYDCVSISAALSACANLP 556
Query: 360 DLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIG 419
G+ IH ++K S++ + L+ MY++CG + A F + K+ SW+SII
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 420 TYKQNGMESEALELCKEMLAE-GITFTSYSLPLCISSCSQLLAINVGKQFHV-----FAI 473
+G ++L L EM+ + GI + ISSC + ++ G +F + I
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 474 KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNE 512
+ H + ++D++ + G + ++ + + P +
Sbjct: 677 QPQQEH----YACVVDLFGRAGRLTEAYETVKSMPFPPD 711
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 206/426 (48%), Gaps = 10/426 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M + VTW +IS ++++G + ++ F +M P+ TFS LL + +
Sbjct: 300 MSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYC 359
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSN-NGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
QIH ++R + D F S+L+ Y G ++ A +F D+V + MISG+
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM--AQNIFSQCNSVDVVVFTAMISGYL 417
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDA 176
G + +F + +V+ + P+ T VS+L L + ++HG K G +
Sbjct: 418 HNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRC 476
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ A++D+YAKCG ++ +IF+ + ++D W+S+I+ ++ A+ F+ M
Sbjct: 477 NIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 536
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+ D +S+ L AC + + G +HG MIK+ +D + S L+ +YA G L+ A
Sbjct: 537 GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+F+ + +K+IV+WNS+I A G+ S+ L E+ + ++ T + I+ SC
Sbjct: 597 MNVFKTMKEKNIVSWNSIIAACGNHGKLKD-SLCLFHEMVEKSGIRPDQITFLEIISSCC 655
Query: 357 NKSDLPAG-RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS-W 414
+ D+ G R S+ + +V ++ G++ +A++ + D+ W
Sbjct: 656 HVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVW 715
Query: 415 SSIIGT 420
+++G
Sbjct: 716 GTLLGA 721
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/690 (31%), Positives = 363/690 (52%), Gaps = 10/690 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M HR V WT +IS+ ++ A LF +M PNE+TFS ++R+CA + G
Sbjct: 84 MSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++HG ++++G E + GSSL +YS G ++AC +F L D ++W +MIS
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSKCG-QFKEACELFSSLQNADTISWTMMISSLVG 202
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM--QIHGLASKFGAETDAVV 178
+ + +SEM + G+ P+ TFV LL S LG IH G + V+
Sbjct: 203 ARKWREALQFYSEMVKA-GVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVL 261
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
+++VD Y++ + ++ +S E+D F+W+S++SG+ N R +EAV F +M +
Sbjct: 262 KTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL 321
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR-DAE 297
+P+ S+ L C + L+ G Q+H Q IK G ++ V + L+ +Y +A
Sbjct: 322 QPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEAS 381
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
++F + ++V+W ++IL G L++ + R + TL +L++C
Sbjct: 382 RVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNV--VTLSGVLRACSK 439
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
+ +IH+ +++ V +VGN+LV Y+ ++ A+ + +D+ +++S+
Sbjct: 440 LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSL 499
Query: 418 IGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGY 477
+ + + G AL + M +GI SLP IS+ + L A+ GK H +++KSG+
Sbjct: 500 VTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGF 559
Query: 478 NHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTM 537
+ V +S++DMY+KCG +ED+KKVF+ P+ V +N ++ G A +G A+ F
Sbjct: 560 SGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEE 619
Query: 538 LEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAG 597
+ P+ VTFL +LSACS+ + L F +M Y I+P+ EHY LV GRAG
Sbjct: 620 MRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAG 679
Query: 598 RLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSN 654
RLEEA +V+ + ++TLL ACR N +GE A K + L PSD A YILL++
Sbjct: 680 RLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLAD 739
Query: 655 IYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+Y E GK E A+ R M + + K G S
Sbjct: 740 LYDESGKPELAQKTRNLMTEKRLSKKLGKS 769
Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 149/603 (24%), Positives = 284/603 (47%), Gaps = 14/603 (2%)
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
+GL IH +++ GL + ++L+ +Y + +A +F ++ R + AW VMIS F
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKT-DGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETD 175
+ +F LF EM G P+ TF S+++ C+ L ++ ++HG K G E +
Sbjct: 100 TKSQEFASALSLFEEMM-ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGN 158
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
+VV S++ DLY+KCG ++F S++ D W+ +IS + EA+ F+ +M K
Sbjct: 159 SVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK 218
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
V P++ L A L G +H +I G + + + L+ Y+ F + D
Sbjct: 219 AGVPPNEFTFVKLLGAS-SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A ++ ++D+ W S++ + + L+ R+ LQ T AIL C
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLE--MRSLGLQPNNFTYSAILSLC 335
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIG-DAFKAFVDIVCKDDSSW 414
L G+QIHS +K T VGNALV MY +C +A + F +V + SW
Sbjct: 336 SAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSW 395
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+++I +G + L EM+ + +L + +CS+L + + H + ++
Sbjct: 396 TTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR 455
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
+ ++ VG+S++D YA ++ + V + + + + Y +++ + G+ + A+ +
Sbjct: 456 RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSV 515
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
+ +G+ +Q++ +SA ++ G +E +L + K + + LVD Y
Sbjct: 516 INYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV-KSGFSGAASVLNSLVDMYS 574
Query: 595 RAGRLEEAYQIVQKDGSES--AWRTLLSACRNHN--NTKIGEKSAKKMIELNPSDHASYI 650
+ G LE+A ++ ++ + +W L+S ++ ++ + +M E P I
Sbjct: 575 KCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLI 634
Query: 651 LLS 653
LLS
Sbjct: 635 LLS 637
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 159/323 (49%), Gaps = 7/323 (2%)
Query: 335 LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECG 394
L RT L + I IL C++ S G IH V+K + + N L+ +Y +
Sbjct: 14 LSRTNELGNLQKSCIRILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD 72
Query: 395 QIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCIS 454
I +A K F ++ + +W+ +I + ++ + AL L +EM+A G ++ +
Sbjct: 73 GIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVR 132
Query: 455 SCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVI 514
SC+ L I+ G + H IK+G+ + VGSS+ D+Y+KCG +++ ++F + + +
Sbjct: 133 SCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTIS 192
Query: 515 YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLML 574
+ MI + ++A++ ++ + K GV PN+ TF+ +L A S G +E + + ++
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNII 251
Query: 575 YKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESA--WRTLLSA-CRN-HNNTKI 630
+ I + LVD Y + ++E+A +++ G + W +++S RN +
Sbjct: 252 VR-GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAV 310
Query: 631 GEKSAKKMIELNPSDHASYILLS 653
G + + L P++ +LS
Sbjct: 311 GTFLEMRSLGLQPNNFTYSAILS 333
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/694 (31%), Positives = 377/694 (54%), Gaps = 17/694 (2%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P +NV W ++I + + G P+A + + +R P++YTF +++ACA +G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
++ ++ G E D F G++LV MYS G R A VF ++ RDLV+WN +ISG++
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTR-ARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 122 GDFCMVQRLFSEM---WEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETD 175
G + ++ E+ W V PD+ T S+L L V Q +HG A K G +
Sbjct: 186 GYYEEALEIYHELKNSWIV----PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSV 241
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
VV++ +V +Y K + R++FD M+ +D+ ++++I GY EE+V F +
Sbjct: 242 VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
Q KPD +SS LRAC + DL+ ++ M+K G + V ++L+ +YA G +
Sbjct: 302 Q-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMIT 360
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A +F ++ KD V+WNS+I + Q G +M+L + + Q T + ++
Sbjct: 361 ARDVFNSMECKDTVSWNSIISGYIQSGD-LMEAMKLFK-MMMIMEEQADHITYLMLISVS 418
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+DL G+ +HS +KS + V NAL+ MY++CG++GD+ K F + D +W+
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS 475
++I + G + L++ +M + + + + C+ L A +GK+ H ++
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF 535
GY ++ +G+++I+MY+KCG +E+S +VF+ + + V + MI Y +G+ ++A+E F
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETF 598
Query: 536 TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGR 595
+EK+G+ P+ V F+A++ ACSH+G +++ L F M YKI P EHY+C+VD R
Sbjct: 599 ADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSR 658
Query: 596 AGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILL 652
+ ++ +A + +Q S W ++L ACR + + E+ ++++IELNP D IL
Sbjct: 659 SQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILA 718
Query: 653 SNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
SN Y KW++ R+ + + K+PG SW+
Sbjct: 719 SNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 174/647 (26%), Positives = 316/647 (48%), Gaps = 28/647 (4%)
Query: 49 RACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDL 108
RA ++ + N +IH +++ GL+ F L+ YS+ +++
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 109 VAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHG 165
WN +I F++ G F + ++ E + + PD TF S++K C+ L + ++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESK-VSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 166 LASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEE 225
G E+D V +A+VD+Y++ G ++ R++FD M +D W+S+ISGY+ + EE
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 226 AVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLT 285
A+ + ++ + PD +SS L A + + G +HG +K+G + V + L+
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 286 LYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG 345
+Y F DA ++F +D +D V++N+MI + +L L+ L + +
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ---FKPDL 307
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVD 405
T+ ++L++C + DL + I++ ++K+ + V N L+ +Y++CG + A F
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 406 IVCKDDSSWSSIIGTYKQNGMESEALELCKEML-----AEGITFTSYSLPLCISSCSQLL 460
+ CKD SW+SII Y Q+G EA++L K M+ A+ IT+ + IS ++L
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYL-----MLISVSTRLA 422
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMIC 520
+ GK H IKSG D+ V +++IDMYAKCG + DS K+F + + V +N +I
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 521 GYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIK 580
G +++ T + K+ V P+ TFL L C+ + +L ++ +
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYE 541
Query: 581 PESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES--AWRTLLSACRNHNNTKIGEKSAKKM 638
E + + L++ Y + G LE + ++ ++ W ++ A + GEK+ +
Sbjct: 542 SELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE---GEKALETF 598
Query: 639 IELNPSDHA--SYILLSNIYI--EEGKWEEARDCREKMAKTGVKKDP 681
++ S S + ++ IY G +E C EKM KT K DP
Sbjct: 599 ADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM-KTHYKIDP 644
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 262/526 (49%), Gaps = 14/526 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R++V+W +LIS + G +A +++++++ P+ +T S +L A + G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+HG ++SG+ + LV MY DA VF ++ RD V++N MI G+ +
Sbjct: 227 QGLHGFALKSGVNSVVVVNNGLVAMYLKF-RRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
+ R+F E ++ KPD T S+L+ C L ++ I+ K G ++
Sbjct: 286 LEMVEESVRMFLE--NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V + ++D+YAKCGD+ + R +F+SME KD W+SIISGY + EA+ FK M
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
+ D + + DL G +H IK+G D V++ L+ +YA G + D+
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
K+F + D V WN++I A + G ++ +Q+ ++ R + + AT + L C +
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFAT-GLQVTTQM-RKSEVVPDMATFLVTLPMCAS 521
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
+ G++IH +++ +GNAL+ MYS+CG + ++ + F + +D +W+ +
Sbjct: 522 LAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGM 581
Query: 418 IGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF-AIKSG 476
I Y G +ALE +M GI S I +CS ++ G F +K+
Sbjct: 582 IYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG--LACFEKMKTH 639
Query: 477 YNHDVYVG--SSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMI 519
Y D + + ++D+ ++ + +++ A +KP+ I+ +++
Sbjct: 640 YKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 110/207 (53%), Gaps = 1/207 (0%)
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI-VCK 409
I ++ + S+L R+IH+LV+ + L+ YS + + F + K
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 410 DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFH 469
+ W+SII + +NG+ EALE ++ ++ Y+ P I +C+ L +G +
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 470 VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAK 529
+ G+ D++VG++++DMY++ G + +++VFD + V +N++I GY+ HG +
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 530 QAIEIFTMLEKNGVTPNQVTFLAMLSA 556
+A+EI+ L+ + + P+ T ++L A
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPA 216
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/697 (31%), Positives = 382/697 (54%), Gaps = 19/697 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R W T+I +++ G A L+ +MRV +F LL+ACA G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER-DLVAWNVMISGFA 119
++H +LV+ G F ++LV MY+ N +L A +F E+ D V WN ++S ++
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKN-DDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC-----STLGEVMQIHGLASKFGAET 174
G LF EM + G P++ T VS L C + LG+ +IH K +
Sbjct: 261 TSGKSLETLELFREM-HMTGPAPNSYTIVSALTACDGFSYAKLGK--EIHASVLKSSTHS 317
Query: 175 DAV-VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ V +A++ +Y +CG + +I M D W+S+I GY N +EA+ FF DM
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
K D+ ++S + A + +L G+++H +IK+G ++ V + L+ +Y+
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
+ F R+ DKD+++W ++I +AQ +++L +++ + ++I L +IL+
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQ-NDCHVEALELFRDVAKK-RMEIDEMILGSILR 495
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
+ + ++IH +++ + T++ N LV +Y +C +G A + F I KD S
Sbjct: 496 ASSVLKSMLIVKEIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVS 554
Query: 414 WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAI-NVGKQFHVFA 472
W+S+I + NG ESEA+EL + M+ G++ S +L LCI S + L+ N G++ H +
Sbjct: 555 WTSMISSSALNGNESEAVELFRRMVETGLSADSVAL-LCILSAAASLSALNKGREIHCYL 613
Query: 473 IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAI 532
++ G+ + + +++DMYA CG ++ +K VFD + + Y +MI Y HG K A+
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 533 EIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA 592
E+F + V+P+ ++FLA+L ACSHAG +++ +M ++Y+++P EHY CLVD
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 733
Query: 593 YGRAGRLEEAYQIVQKDGSESA---WRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASY 649
GRA + EA++ V+ +E W LL+ACR+H+ +IGE +A++++EL P + +
Sbjct: 734 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 793
Query: 650 ILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+L+SN++ E+G+W + R KM +G++K PG SW+
Sbjct: 794 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 830
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 175/661 (26%), Positives = 324/661 (49%), Gaps = 28/661 (4%)
Query: 20 GSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRS--GLERDKF 77
G + +AFQ + V + F+ +L C + G Q+H + ++ E D
Sbjct: 62 GVLTEAFQRLD---VSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFL 118
Query: 78 AGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEV 137
AG LV+MY GS L DA VF ++ +R AWN MI + G+ L+ M V
Sbjct: 119 AGK-LVFMYGKCGS-LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RV 175
Query: 138 EGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSS 194
EG+ +F +LLK C+ L ++ ++H L K G + + +A+V +YAK D+S+
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 195 CRKIFDSMEEK-DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACV 253
R++FD +EK D +W+SI+S Y+ + + E + F++M P+ + + S L AC
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 254 EIEDLNTGVQVHGQMIKNG-HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWN 312
G ++H ++K+ H ++ +V + L+ +Y G + AE++ R++++ D+V WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 313 SMILAHAQLGQGSSRSMQLLQEL----HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIH 368
S+I + Q +++ ++ H++ + ++ +I+ + S+L AG ++H
Sbjct: 356 SLIKGYVQ-NLMYKEALEFFSDMIAAGHKSDEV-----SMTSIIAASGRLSNLLAGMELH 409
Query: 369 SLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMES 428
+ V+K VGN L+ MYS+C +AF+ + KD SW+++I Y QN
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV 469
Query: 429 EALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSII 488
EALEL +++ + + L + + S L ++ + K+ H ++ G D + + ++
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELV 528
Query: 489 DMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQV 548
D+Y KC +M + +VF++ + V + +MI A +G +A+E+F + + G++ + V
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Query: 549 TFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
L +LSA + + + +L K E +VD Y G L+ A + +
Sbjct: 589 ALLCILSAAASLSALNKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDR 647
Query: 609 DGSES--AWRTLLSACRNHNNTKIGEKSAKKMIELNPS-DHASYILLSNIYIEEGKWEEA 665
+ + ++++A H K + KM N S DH S++ L G +E
Sbjct: 648 IERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEG 707
Query: 666 R 666
R
Sbjct: 708 R 708
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/693 (31%), Positives = 368/693 (53%), Gaps = 44/693 (6%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP+R+VV W ++ ++L G +A L + PNE T +L R
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARI---------- 255
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
SG + D AG + N+ S++ + ++ N +S +
Sbjct: 256 ---------SGDDSD--AGQVKSFANGNDASSVSE------------IIFRNKGLSEYLH 292
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFGAETDAV 177
G + + + F++M E + ++ D TF+ +L +L Q+H +A K G +
Sbjct: 293 SGQYSALLKCFADMVESD-VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
VS++++++Y K R +FD+M E+D W+S+I+G N EAV F + +
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 238 VKPDQHVLSSTLRACVEI-EDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+KPDQ+ ++S L+A + E L+ QVH IK + +D FV++ L+ Y+ +++A
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
E LF R + D+VAWN+M+ + Q G ++++L +H+ + TL + K+C
Sbjct: 472 EILFER-HNFDLVAWNAMMAGYTQSHDGH-KTLKLFALMHKQGE-RSDDFTLATVFKTCG 528
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS 416
+ G+Q+H+ +KS V + ++ MY +CG + A AF I DD +W++
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSG 476
+I +NG E A + +M G+ +++ + S L A+ G+Q H A+K
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 477 YNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFT 536
+D +VG+S++DMYAKCG ++D+ +F N +NAM+ G A HG+ K+ +++F
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 537 MLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRA 596
++ G+ P++VTF+ +LSACSH+G + + M Y IKPE EHYSCL DA GRA
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 597 GRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLS 653
G +++A +++ + S S +RTLL+ACR +T+ G++ A K++EL P D ++Y+LLS
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 654 NIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
N+Y KW+E + R M VKKDPG SW+
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 173/671 (25%), Positives = 308/671 (45%), Gaps = 68/671 (10%)
Query: 1 MPHRNVVTWTTLISSHLRAG-----SVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPA 55
MP R++V+W ++++++ ++ ++ +AF LF +R + T S +L+ C
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 56 LWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMI 115
HG + GL+ D+F +LV +Y G +++ +F ++ RD+V WN+M+
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG-KVKEGKVLFEEMPYRDVVLWNLML 218
Query: 116 SGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETD 175
+ ++G F S + GL P+ T + LA G ++D
Sbjct: 219 KAYLEMG-FKEEAIDLSSAFHSSGLNPNEIT----------------LRLLARISGDDSD 261
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
A V +A D SS +I + +S Y + + + F DM +
Sbjct: 262 A----GQVKSFANGNDASSVSEI---------IFRNKGLSEYLHSGQYSALLKCFADMVE 308
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
V+ DQ L V+++ L G QVH +K G V++ L+ +Y
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLG---QGSSRSMQLLQELHRTTSLQIQGATLIAIL 352
A +F + ++D+++WNS+I AQ G + MQLL+ L+ T+ ++L
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-----CGLKPDQYTMTSVL 423
Query: 353 KSCKNKSDLPAG----RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF----V 404
K+ S LP G +Q+H +K + + V AL+ YS + +A F
Sbjct: 424 KAA---SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF 480
Query: 405 DIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINV 464
D+V +W++++ Y Q+ + L+L M +G ++L +C L AIN
Sbjct: 481 DLV-----AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535
Query: 465 GKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAH 524
GKQ H +AIKSGY+ D++V S I+DMY KCG M ++ FD+ P++V + MI G
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 525 HGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESE 584
+G+ ++A +F+ + GV P++ T + A S +E + L K+ ++
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL---KLNCTND 652
Query: 585 HY--SCLVDAYGRAGRLEEAYQIVQKDG--SESAWRTLLSACRNHNNTKIGEKSAKKMIE 640
+ + LVD Y + G +++AY + ++ + +AW +L H K + K+M
Sbjct: 653 PFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 641 LN-PSDHASYI 650
L D ++I
Sbjct: 713 LGIKPDKVTFI 723
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 147/593 (24%), Positives = 265/593 (44%), Gaps = 61/593 (10%)
Query: 47 LLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER 106
LR T + +G H ++ ++F ++L+ MYS GS L A VF + +R
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGS-LTYARRVFDKMPDR 103
Query: 107 DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPD-----NRTFVSLLKCCSTLGEVM 161
DLV+WN +++ +AQ + C+V+ + L+ D T +LK C G V
Sbjct: 104 DLVSWNSILAAYAQSSE-CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 162 ---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYT 218
HG A K G + D V+ A+V++Y K G V + +F+ M +D +W+ ++ Y
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 219 VNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCF 278
EEA+ + P++ TLR I ++ GQ+ + ND
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNE----ITLRLLARISGDDSDA---GQVKSFANGND-- 273
Query: 279 VASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT 338
+SV +E +FR N + + GQ S+ ++ ++
Sbjct: 274 ASSV-------------SEIIFR----------NKGLSEYLHSGQYSAL-LKCFADMVE- 308
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
+ ++ T I +L + L G+Q+H + +K + V N+L++MY + + G
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
A F ++ +D SW+S+I QNG+E EA+ L ++L G+ Y++ + + S
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 459 LL-AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNA 517
L +++ KQ HV AIK D +V +++ID Y++ M++++ +F+ + V +NA
Sbjct: 429 LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNA 487
Query: 518 MICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKY 577
M+ GY + +++F ++ K G + T + C I ++ Y
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ-----VHAY 542
Query: 578 KIKPESEH----YSCLVDAYGRAGRLEEAY----QIVQKDGSESAWRTLLSAC 622
IK + S ++D Y + G + A I D + AW T++S C
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD--DVAWTTMISGC 593
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 220/476 (46%), Gaps = 47/476 (9%)
Query: 164 HGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYT----- 218
H F + + + ++ +Y+KCG ++ R++FD M ++D W+SI++ Y
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 219 VNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCF 278
V ++A F+ + + V + LS L+ C+ + HG K G D F
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 279 VASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT 338
VA L+ +Y FG +++ + LF + +D+V WN M+ A+ ++G ++ L H +
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG-FKEEAIDLSSAFH-S 239
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
+ L TL + + + SD + + SSVS + N + Y GQ
Sbjct: 240 SGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSE-IIFRNKGLSEYLHSGQYSA 298
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
K F D+V D + + +TF L +++ +
Sbjct: 299 LLKCFADMVESD--------------------------VECDQVTFI-----LMLATAVK 327
Query: 459 LLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAM 518
+ ++ +G+Q H A+K G + + V +S+I+MY K ++ VFD + + + +N++
Sbjct: 328 VDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSV 387
Query: 519 ICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFT-LMLYKY 577
I G A +G +A+ +F L + G+ P+Q T ++L A S + + L+L + ++
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAI 444
Query: 578 KIKPESEHY--SCLVDAYGRAGRLEEAYQIVQKDGSE-SAWRTLLSA-CRNHNNTK 629
KI S+ + + L+DAY R ++EA + ++ + AW +++ ++H+ K
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHK 500
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 116/228 (50%), Gaps = 8/228 (3%)
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
L++ SDL G+ H+ ++ + + N L+ MYS+CG + A + F +
Sbjct: 43 FGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD 102
Query: 409 KDDSSWSSIIGTYKQNG---MES-EALELCKEMLAEGITFTS-YSLPLCISSCSQLLAIN 463
+D SW+SI+ Y Q+ +E+ + L +L + + +TS +L + C +
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 464 VGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYA 523
+ FH +A K G + D +V +++++Y K G +++ K +F+ + V++N M+ Y
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 524 HHGQAKQAIEIFTMLEKNGVTPNQVT--FLAMLSA-CSHAGYIEDTLN 568
G ++AI++ + +G+ PN++T LA +S S AG ++ N
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFAN 270
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/675 (32%), Positives = 361/675 (53%), Gaps = 16/675 (2%)
Query: 20 GSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAG 79
G + +A +L N M+ + +E F L+R C G +++ + + S G
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 80 SSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEG 139
++ + M+ G NL DA VF + ER+L +WNV++ G+A+ G F L+ M V G
Sbjct: 133 NAFLAMFVRFG-NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 140 LKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCR 196
+KPD TF +L+ C + ++ ++H ++G E D V +A++ +Y KCGDV S R
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 197 KIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIE 256
+FD M +D W+++ISGY N E + F M V PD L+S + AC +
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 257 DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMIL 316
D G +H +I G D V + L +Y N G R+AEKLF R++ KDIV+W +MI
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 317 AHAQ--LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS 374
+ L + + +++ + S++ T+ A+L +C DL G ++H L +K+
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQ----DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELC 434
+ +V N L++MYS+C I A F +I K+ SW+SII + N EAL
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFL 487
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKC 494
++M + + +L +++C+++ A+ GK+ H +++G D ++ ++++DMY +C
Sbjct: 488 RQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRC 546
Query: 495 GHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAML 554
G M + F++Q K + +N ++ GY+ GQ +E+F + K+ V P+++TF+++L
Sbjct: 547 GRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLL 605
Query: 555 SACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGS 611
CS + + L F+ M Y + P +HY+C+VD GRAG L+EA++ +QK
Sbjct: 606 CGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 664
Query: 612 ESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREK 671
+ W LL+ACR H+ +GE SA+ + EL+ YILL N+Y + GKW E R
Sbjct: 665 PAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRM 724
Query: 672 MAKTGVKKDPGSSWL 686
M + G+ D G SW+
Sbjct: 725 MKENGLTVDAGCSWV 739
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/526 (26%), Positives = 256/526 (48%), Gaps = 15/526 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMR-VMDERPNEYTFSVLLRACATPALWNV 59
M RN+ +W L+ + + G +A L++ M V +P+ YTF +LR C
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G ++H +VR G E D ++L+ MY G +++ A +F + RD+++WN MISG+
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCG-DVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 120 QVGDFCMVQRLFSEMWEVEGLK--PDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAET 174
+ G M + + GL PD T S++ C LG+ IH G
Sbjct: 274 ENG---MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
D V +++ +Y G K+F ME KD W+++ISGY N ++A+ ++ M
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ VKPD+ +++ L AC + DL+TGV++H IK + VA+ L+ +Y+ +
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
A +F I K++++W S I+A +L ++ L+++ T LQ TL A L +
Sbjct: 451 KALDIFHNIPRKNVISWTS-IIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAALAA 507
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
C L G++IH+ V+++ V + NAL+ MY CG++ A+ F + KD +SW
Sbjct: 508 CARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSW 566
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+ ++ Y + G S +EL M+ + + + CS+ + G +
Sbjct: 567 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED 626
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMI 519
G ++ + ++D+ + G ++++ K V P+ ++ A++
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 203/419 (48%), Gaps = 12/419 (2%)
Query: 214 ISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH 273
+ G N + EEA+ M + RV D+ V + +R C G +V+ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 274 QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQ 333
+ + L ++ FG L DA +F ++ ++++ +WN ++ +A+ G +M L
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGY-FDEAMCLYH 184
Query: 334 ELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSEC 393
+ ++ T +L++C DL G+++H V++ V NAL+ MY +C
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 394 GQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCI 453
G + A F + +D SW+++I Y +NGM E LEL M + +L I
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 454 SSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEV 513
S+C L +G+ H + I +G+ D+ V +S+ MY G +++K+F + + V
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 514 IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
+ MI GY ++ +AI+ + M++++ V P+++T A+LSAC+ G ++ +
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE----- 419
Query: 574 LYKYKIKPESEHY----SCLVDAYGRAGRLEEAYQIVQKDGSES--AWRTLLSACRNHN 626
L+K IK Y + L++ Y + +++A I ++ +W ++++ R +N
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNN 478
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/659 (32%), Positives = 350/659 (53%), Gaps = 20/659 (3%)
Query: 44 FSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL 103
+ +L + A +G HG +++S L + ++L+ MY L A +F +
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCK-CRELGFARQLFDRM 108
Query: 104 LERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST-----LG 158
ER+++++N +ISG+ Q+G + LF E E LK D T+ L C LG
Sbjct: 109 PERNIISFNSLISGYTQMGFYEQAMELFLEAREAN-LKLDKFTYAGALGFCGERCDLDLG 167
Query: 159 EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYT 218
E++ HGL G + + ++D+Y+KCG + +FD +E+D W+S+ISGY
Sbjct: 168 ELL--HGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 219 VNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRAC-VEIED--LNTGVQVHGQMIKNGHQN 275
EE ++ M + + + L S L+AC + + + + G+ +H K G +
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 276 DCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ----GSSRSMQL 331
D V + LL +YA G L++A KLF + K++V +N+MI Q+ + SS + +L
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 332 LQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYS 391
++ R L+ +T +LK+C L GRQIH+L+ K++ +G+AL+ +Y+
Sbjct: 346 FMDMQRR-GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYA 404
Query: 392 ECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL 451
G D + F +D +SW+S+I + QN A +L +++ + I Y++ L
Sbjct: 405 LMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSL 464
Query: 452 CISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPN 511
+S+C+ A++ G+Q +AIKSG + V +S I MYAK G+M + +VF P+
Sbjct: 465 MMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPD 524
Query: 512 EVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFT 571
Y+AMI A HG A +A+ IF ++ +G+ PNQ FL +L AC H G + L F
Sbjct: 525 VATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQ 584
Query: 572 LMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNT 628
M Y+I P +H++CLVD GR GRL +A ++ G + WR LLS+CR + ++
Sbjct: 585 CMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDS 644
Query: 629 KIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWLI 687
IG++ A++++EL P SY+LL NIY + G A + RE M GVKK+P SW++
Sbjct: 645 VIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIV 703
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 269/532 (50%), Gaps = 17/532 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RN++++ +LIS + + G +A +LF + R + + +++T++ L C ++G
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+HG++V +GL + F + L+ MYS G L A +F ERD V+WN +ISG+ +
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCG-KLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK-CCSTLGE-----VMQIHGLASKFGAET 174
VG L ++M +GL S+LK CC L E M IH +K G E
Sbjct: 227 VGAAEEPLNLLAKMHR-DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGY-----TVNNRGEEAVHF 229
D VV +A++D+YAK G + K+F M K+ ++++ISG+ + EA
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
F DM ++ ++P S L+AC + L G Q+H + KN Q+D F+ S L+ LYA
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 290 FGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLI 349
G D + F +DI +W SMI H Q Q S + L ++L ++ ++ + T+
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLES-AFDLFRQLF-SSHIRPEEYTVS 463
Query: 350 AILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK 409
++ +C + + L +G QI +KS + T V + + MY++ G + A + F+++
Sbjct: 464 LMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNP 523
Query: 410 DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYS-LPLCISSCSQLLAINVGKQF 468
D +++S++I + Q+G +EAL + + M GI + L + I+ C L K F
Sbjct: 524 DVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYF 583
Query: 469 HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMI 519
N + + ++D+ + G + D++ + + + + V + A++
Sbjct: 584 QCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALL 635
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
+++ +WT++I H++ + AF LF + RP EYT S+++ ACA A + G QI
Sbjct: 422 QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
G ++SG++ +S + MY+ +G N+ A VF ++ D+ ++ MIS AQ G
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSG-NMPLANQVFIEVQNPDVATYSAMISSLAQHGS 540
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDAVVS 179
+F M + G+KP+ + F+ +L C G V Q + + + +
Sbjct: 541 ANEALNIFESM-KTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHF 599
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFV-WSSIIS 215
+ +VDL + G +S + S +D+ V W +++S
Sbjct: 600 TCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/690 (30%), Positives = 367/690 (53%), Gaps = 13/690 (1%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R+V T + +G++ A +L D P T +L+ CA G ++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 116
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
+ +G D GS L MY+N G +L++A VF ++ + WN++++ A+ GD
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCG-DLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSS 180
F LF +M G++ D+ TF + K S+L V Q+HG K G V +
Sbjct: 176 FSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN 234
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
++V Y K V S RK+FD M E+D W+SII+GY N E+ + F M ++
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
D + S C + ++ G VH +K + + LL +Y+ G L A+ +F
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
R + D+ +V++ SMI +A+ G + +++L +E+ + T+ A+L C
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGL-AGEAVKLFEEMEEE-GISPDVYTVTAVLNCCARYRL 412
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
L G+++H + ++ + V NAL+ MY++CG + +A F ++ KD SW++IIG
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 421 YKQNGMESEALELCKEMLAEG-ITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH 479
Y +N +EAL L +L E + ++ + +C+ L A + G++ H + +++GY
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLE 539
D +V +S++DMYAKCG + + +FD + V + MI GY HG K+AI +F +
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 540 KNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRL 599
+ G+ ++++F+++L ACSH+G +++ F +M ++ KI+P EHY+C+VD R G L
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 600 EEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIY 656
+AY+ ++ + W LL CR H++ K+ EK A+K+ EL P + Y+L++NIY
Sbjct: 653 IKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 712
Query: 657 IEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
E KWE+ + R+++ + G++K+PG SW+
Sbjct: 713 AEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 218/424 (51%), Gaps = 10/424 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R+V++W ++I+ ++ G K +F M V + T + CA L ++G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+H + V++ R+ ++L+ MYS G +L A VF ++ +R +V++ MI+G+A+
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCG-DLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFGAETDAV 177
G +LF EM E EG+ PD T ++L CC+ L E ++H + D
Sbjct: 375 EGLAGEAVKLFEEM-EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ- 236
VS+A++D+YAKCG + +F M KD W++II GY+ N EA+ F + ++
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
R PD+ ++ L AC + + G ++HG +++NG+ +D VA+ L+ +YA G L A
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
LF I KD+V+W MI + G G ++ L ++ R ++ + +++L +C
Sbjct: 554 HMLFDDIASKDLVSWTVMIAGYGMHGFGKE-AIALFNQM-RQAGIEADEISFVSLLYACS 611
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAFVDIVCKDDSS-W 414
+ + G + +++ PT+ A +V M + G + A++ ++ D++ W
Sbjct: 612 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIW 671
Query: 415 SSII 418
+++
Sbjct: 672 GALL 675
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/693 (30%), Positives = 368/693 (53%), Gaps = 13/693 (1%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNV--GL 61
R+V W ++I + + + F M V RP+ ++ S+++ + G
Sbjct: 131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGK 190
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER-DLVAWNVMISGFAQ 120
QIHG ++R+ L+ D F ++L+ MY G ++ DA VF ++ ++ ++V WNVMI GF
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI-DAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETDAV 177
G C + + +K + +F L CS G QIH K G D
Sbjct: 250 SG-ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V ++++ +Y+KCG V +F + +K +W+++++ Y N+ G A+ F M ++
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKS 368
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
V PD LS+ + C + N G VH ++ K Q+ + S LLTLY+ G DA
Sbjct: 369 VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY 428
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTT-SLQIQGATLIAILKSCK 356
+F+ +++KD+VAW S+I + G+ ++++ ++ SL+ + ++ +C
Sbjct: 429 LVFKSMEEKDMVAWGSLISGLCKNGK-FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS 416
L G Q+H ++K+ + VG++L+ +YS+CG A K F + ++ +W+S
Sbjct: 488 GLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNS 547
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSG 476
+I Y +N + +++L ML++GI S S+ + + S ++ GK H + ++ G
Sbjct: 548 MISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG 607
Query: 477 YNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFT 536
D ++ +++IDMY KCG + ++ +F + + +N MI GY HG A+ +F
Sbjct: 608 IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFD 667
Query: 537 MLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRA 596
++K G +P+ VTFL+++SAC+H+G++E+ N+F M Y I+P EHY+ +VD GRA
Sbjct: 668 EMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRA 727
Query: 597 GRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLS 653
G LEEAY ++ + S W LLSA R H+N ++G SA+K++ + P ++Y+ L
Sbjct: 728 GLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLI 787
Query: 654 NIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
N+Y+E G EA M + G+ K PG SW+
Sbjct: 788 NLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 183/645 (28%), Positives = 312/645 (48%), Gaps = 32/645 (4%)
Query: 42 YTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVF- 100
+TF LL+AC+ + G IHG +V G D F +SLV MY G L A VF
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGF-LDYAVQVFD 119
Query: 101 ------HDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
+ RD+ WN MI G+ + F F M V G++PD + ++
Sbjct: 120 GWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRML-VFGVRPDAFSLSIVVSVM 178
Query: 155 STLG-----EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
G E QIHG + +TD+ + +A++D+Y K G ++F +E+K N V
Sbjct: 179 CKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 210 -WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQM 268
W+ +I G+ + E ++ + VK + L AC + E+ G Q+H +
Sbjct: 239 LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 269 IKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRS 328
+K G ND +V + LL++Y+ G + +AE +F + DK + WN+M+ A+A+ G S +
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYS-A 357
Query: 329 MQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVH 388
+ L R S+ TL ++ C G+ +H+ + K + + + +AL+
Sbjct: 358 LDLFG-FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLT 416
Query: 389 MYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYS 448
+YS+CG DA+ F + KD +W S+I +NG EAL++ +M + + S
Sbjct: 417 LYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 449 --LPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA 506
+ ++C+ L A+ G Q H IK+G +V+VGSS+ID+Y+KCG E + KVF +
Sbjct: 477 DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 507 QVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI--E 564
N V +N+MI Y+ + + +I++F ++ G+ P+ V+ ++L A S +
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 565 DTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES--AWRTLLSAC 622
+L+ +TL L I ++ + L+D Y + G + A I +K +S W ++
Sbjct: 597 KSLHGYTLRL---GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGY 653
Query: 623 RNHNN--TKIGEKSAKKMIELNPSDHASYILLSNI----YIEEGK 661
+H + T + K +P D L+S ++EEGK
Sbjct: 654 GSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGK 698
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 7/257 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE--RPNEYTFSVLLRACATPALWN 58
M +++V W +LIS + G +A ++F DM+ D+ +P+ + + ACA
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
GLQ+HG ++++GL + F GSSL+ +YS G A VF + ++VAWN MIS +
Sbjct: 494 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLP-EMALKVFTSMSTENMVAWNSMISCY 552
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETD 175
++ + LF+ M +G+ PD+ + S+L S+ +++ +HG + G +D
Sbjct: 553 SRNNLPELSIDLFNLMLS-QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSD 611
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
+ +A++D+Y KCG IF M+ K W+ +I GY + A+ F +M K
Sbjct: 612 THLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKK 671
Query: 236 QRVKPDQHVLSSTLRAC 252
PD S + AC
Sbjct: 672 AGESPDDVTFLSLISAC 688
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 7/220 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M N+V W ++IS + R + LFN M P+ + + +L A ++ A G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+HG +R G+ D ++L+ MY G + + A +F + + L+ WN+MI G+
Sbjct: 597 KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS-KYAENIFKKMQHKSLITWNLMIYGYGS 655
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
GD LF EM + G PD+ TF+SL+ C+ G V + + +G E +
Sbjct: 656 HGDCITALSLFDEM-KKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIIS 215
+ MVDL + G + +M E D+ +W ++S
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLS 754
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTS-YSLPLCISSCSQLLAINVGKQFHV 470
+S +S I Q G +AL L + +TS ++ P + +CS L ++ GK H
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD------AQVKPNEV-IYNAMICGYA 523
+ G+ +D ++ +S+++MY KCG ++ + +VFD + V +V ++N+MI GY
Sbjct: 85 SVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 524 HHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI--EDTLNLFTLMLYKYKIKP 581
+ K+ + F + GV P+ + ++S G E+ + ML + +
Sbjct: 145 KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFML-RNSLDT 203
Query: 582 ESEHYSCLVDAYGRAGRLEEAYQI 605
+S + L+D Y + G +A+++
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRV 227
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 359 bits (922), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 217/692 (31%), Positives = 375/692 (54%), Gaps = 15/692 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACA-TPALWNV 59
P+ + + LI ++ + A L++ + + +++ F +LRACA + +V
Sbjct: 60 FPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV 119
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G ++HG +++ G++ D +SL+ MY G NL DA VF + RDLVAW+ ++S
Sbjct: 120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTG-NLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDA 176
+ G+ R+F M + +G++PD T +S+++ C+ LG + +HG ++ + D
Sbjct: 179 ENGEVVKALRMFKCMVD-DGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE 237
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ ++++ +Y+KCGD+ S +IF+ + +K+ W+++IS Y E+A+ F +M K
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG-HQNDCFVASVLLTLYANFGGLRD 295
++P+ L S L +C I + G VHG ++ N ++ L+ LYA G L D
Sbjct: 298 GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD 357
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
E + R + D++IVAWNS+I +A G +++ L +++ T ++ TL + + +C
Sbjct: 358 CETVLRVVSDRNIVAWNSLISLYAHRGM-VIQALGLFRQM-VTQRIKPDAFTLASSISAC 415
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+N +P G+QIH V+++ VS V N+L+ MYS+ G + A F I + +W+
Sbjct: 416 ENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 474
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS 475
S++ + QNG EA+ L M + + I +CS + ++ GK H I S
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS 534
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF 535
G D++ +++IDMYAKCG + ++ VF A + V +++MI Y HG+ AI F
Sbjct: 535 GLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTF 593
Query: 536 TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGR 595
+ ++G PN+V F+ +LSAC H+G +E+ F LM + + P SEH++C +D R
Sbjct: 594 NQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSR 652
Query: 596 AGRLEEAYQIVQKD---GSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILL 652
+G L+EAY+ +++ S W +L++ CR H I + + ++ D Y LL
Sbjct: 653 SGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLL 712
Query: 653 SNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
SNIY EEG+WEE R R M + +KK PG S
Sbjct: 713 SNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYS 744
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/579 (27%), Positives = 298/579 (51%), Gaps = 40/579 (6%)
Query: 47 LLRACATPALWNVGLQIHGVLVRSG-LERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE 105
L R+C++ L + Q+H L+ +G L RD + L+ Y+ GS + VF
Sbjct: 7 LFRSCSSLRLVS---QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSP-DSSRLVFEAFPY 62
Query: 106 RDLVAWNVMISGFAQVGDFC--------MVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL 157
D + V+I + +C + RL SE ++ F S+L+ C+
Sbjct: 63 PDSFMYGVLI----KCNVWCHLLDAAIDLYHRLVSETTQISKF-----VFPSVLRACAGS 113
Query: 158 GEVM----QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSI 213
E + ++HG K G + DAV+ ++++ +Y + G++S K+FD M +D WS++
Sbjct: 114 REHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTL 173
Query: 214 ISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH 273
+S N +A+ FK M V+PD + S + C E+ L VHGQ+ +
Sbjct: 174 VSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMF 233
Query: 274 QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQ 333
D + + LLT+Y+ G L +E++F +I K+ V+W +MI ++ + G+ S ++++
Sbjct: 234 DLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR-GEFSEKALRSFS 292
Query: 334 ELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTL--VGNALVHMYS 391
E+ + + ++ TL ++L SC + G+ +H ++ + P + ALV +Y+
Sbjct: 293 EMIK-SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD-PNYESLSLALVELYA 350
Query: 392 ECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL 451
ECG++ D + ++ +W+S+I Y GM +AL L ++M+ + I +++L
Sbjct: 351 ECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLAS 410
Query: 452 CISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPN 511
IS+C + +GKQ H I++ + D +V +S+IDMY+K G ++ + VF+ Q+K
Sbjct: 411 SISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFN-QIKHR 468
Query: 512 EVI-YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLF 570
V+ +N+M+CG++ +G + +AI +F + + + N+VTFLA++ ACS G +E
Sbjct: 469 SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG---- 524
Query: 571 TLMLYKYKIKPESEHY--SCLVDAYGRAGRLEEAYQIVQ 607
+ +K I + + + L+D Y + G L A + +
Sbjct: 525 KWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFR 563
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 180/363 (49%), Gaps = 8/363 (2%)
Query: 263 QVHGQMIKNGH-QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQL 321
Q+H ++ G + D + L+ YA G + +F D + +I +
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWC 78
Query: 322 GQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK-NKSDLPAGRQIHSLVMKSSVSHPT 380
+ ++ L L T+ QI ++L++C ++ L G ++H ++K V
Sbjct: 79 HLLDA-AIDLYHRLVSETT-QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDA 136
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
++ +L+ MY + G + DA K F + +D +WS+++ + +NG +AL + K M+ +
Sbjct: 137 VIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDD 196
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
G+ + ++ + C++L + + + H + ++ D + +S++ MY+KCG + S
Sbjct: 197 GVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSS 256
Query: 501 KKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHA 560
+++F+ K N V + AMI Y +++A+ F+ + K+G+ PN VT ++LS+C
Sbjct: 257 ERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLI 316
Query: 561 GYIEDTLNLFTLMLYKYKIKPESEHYS-CLVDAYGRAGRLEEAYQIVQ--KDGSESAWRT 617
G I + ++ + + ++ P E S LV+ Y G+L + +++ D + AW +
Sbjct: 317 GLIREGKSVHGFAV-RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNS 375
Query: 618 LLS 620
L+S
Sbjct: 376 LIS 378
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/654 (31%), Positives = 354/654 (54%), Gaps = 21/654 (3%)
Query: 41 EYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVF 100
E+ ++LL C++ QI ++ ++GL ++ F + LV ++ GS + +A VF
Sbjct: 37 EHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGS-VDEAARVF 92
Query: 101 HDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV 160
+ + V ++ M+ GFA+V D + F M + ++P F LLK C E+
Sbjct: 93 EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAEL 151
Query: 161 M---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGY 217
+IHGL K G D + + ++YAKC V+ RK+FD M E+D W++I++GY
Sbjct: 152 RVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGY 211
Query: 218 TVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDC 277
+ N A+ K MC++ +KP + S L A + ++ G ++HG +++G +
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271
Query: 278 FVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELH- 336
+++ L+ +YA G L A +LF + ++++V+WNSMI A+ Q + +M + Q++
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ-NENPKEAMLIFQKMLD 330
Query: 337 ---RTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSEC 393
+ T + + GA L +C + DL GR IH L ++ + V N+L+ MY +C
Sbjct: 331 EGVKPTDVSVMGA-----LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 394 GQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCI 453
++ A F + + SW+++I + QNG +AL +M + + +++ I
Sbjct: 386 KEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 454 SSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEV 513
++ ++L + K H ++S + +V+V ++++DMYAKCG + ++ +FD + +
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505
Query: 514 IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
+NAMI GY HG K A+E+F ++K + PN VTFL+++SACSH+G +E L F +M
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565
Query: 574 LYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESA---WRTLLSACRNHNNTKI 630
Y I+ +HY +VD GRAGRL EA+ + + + A + +L AC+ H N
Sbjct: 566 KENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNF 625
Query: 631 GEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
EK+A+++ ELNP D ++LL+NIY WE+ R M + G++K PG S
Sbjct: 626 AEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679
Score = 242 bits (617), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 160/525 (30%), Positives = 273/525 (52%), Gaps = 23/525 (4%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGV 66
V + T++ + + KA Q F MR D P Y F+ LL+ C A VG +IHG+
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCM 126
LV+SG D FA + L MY+ + +A VF + ERDLV+WN +++G++Q G M
Sbjct: 161 LVKSGFSLDLFAMTGLENMYA-KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 127 VQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMV 183
+ M E E LKP T VS+L S L + +IHG A + G ++ +S+A+V
Sbjct: 220 ALEMVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 184 DLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQH 243
D+YAKCG + + R++FD M E++ W+S+I Y N +EA+ F+ M + VKP
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRI 303
+ L AC ++ DL G +H ++ G + V + L+++Y + A +F ++
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 304 DDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPA 363
+ +V+WN+MIL AQ G+ ++ ++ R+ +++ T ++++ + S
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPID-ALNYFSQM-RSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 364 GRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQ 423
+ IH +VM+S + V ALV MY++CG I A F + + ++W+++I Y
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 424 NGMESEALELCKEML-----AEGITFTSYSLPLCISSCSQLLAINVG-KQFHVFAIKSGY 477
+G ALEL +EM G+TF S IS+CS + G K F++ +K Y
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLS-----VISACSHSGLVEAGLKCFYM--MKENY 569
Query: 478 NHDVYVG--SSIIDMYAKCGHMEDS-KKVFDAQVKPNEVIYNAMI 519
+ ++ + +++D+ + G + ++ + VKP +Y AM+
Sbjct: 570 SIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 220/414 (53%), Gaps = 10/414 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R++V+W T+++ + + G A ++ M + +P+ T +L A + L +VG
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IHG +RSG + ++LV MY+ GS L A +F +LER++V+WN MI + Q
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGS-LETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAV 177
+ +F +M + EG+KP + + + L C+ LG++ + IH L+ + G + +
Sbjct: 315 NENPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V ++++ +Y KC +V + +F ++ + W+++I G+ N R +A+++F M +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
VKPD S + A E+ + +HG ++++ + FV + L+ +YA G + A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
+F + ++ + WN+MI + G G + +++L +E+ + T ++ G T ++++ +C +
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKA-ALELFEEMQKGT-IKPNGVTFLSVISACSH 551
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGN--ALVHMYSECGQIGDAFKAFVDIVCK 409
+ AG + + MK + S + + A+V + G++ +A+ + + K
Sbjct: 552 SGLVEAGLKCFYM-MKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK 604
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 221/701 (31%), Positives = 378/701 (53%), Gaps = 22/701 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL-- 61
+N V+W ++IS + +AG AF++F+ M+ RP EYTF L+ + +V L
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
QI + +SGL D F GS LV ++ +GS L A VF+ + R+ V N ++ G +
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGS-LSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST--------LGEVMQIHGLASKFGAE 173
+LF +M + + P+ ++V LL L + ++HG G
Sbjct: 288 KWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345
Query: 174 TDAV-VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKD 232
V + + +V++YAKCG ++ R++F M +KD+ W+S+I+G N EAV +K
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGG 292
M + + P L S+L +C ++ G Q+HG+ +K G + V++ L+TLYA G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 293 LRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAIL 352
L + K+F + + D V+WNS+I A A+ + ++ R ++ T ++L
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVL 524
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV-CKDD 411
+ + S G+QIH L +K++++ NAL+ Y +CG++ K F + +D+
Sbjct: 525 SAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
+W+S+I Y N + ++AL+L ML G S+ +S+ + + + G + H
Sbjct: 585 VTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC 644
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
++++ DV VGS+++DMY+KCG ++ + + F+ N +N+MI GYA HGQ ++A
Sbjct: 645 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 704
Query: 532 IEIFTMLEKNGVT-PNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLV 590
+++F ++ +G T P+ VTF+ +LSACSHAG +E+ F M Y + P EH+SC+
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 764
Query: 591 DAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTK--IGEKSAKKMIELNPSD 645
D GRAG L++ ++K + WRT+L AC N K +G+K+A+ + +L P +
Sbjct: 765 DVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 824
Query: 646 HASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+Y+LL N+Y G+WE+ R+KM VKK+ G SW+
Sbjct: 825 AVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 196/703 (27%), Positives = 327/703 (46%), Gaps = 42/703 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNV- 59
MP RN V+W ++S + R G +A DM N+Y F +LRAC +
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL 121
Query: 60 -GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
G QIHG++ + D + L+ MY ++ A C F D+ ++ V+WN +IS +
Sbjct: 122 FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGE-----VMQIHGLASKFGAE 173
+Q GD R+FS M + +G +P TF SL+ +L E + QI K G
Sbjct: 182 SQAGDQRSAFRIFSSM-QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL 240
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
TD V S +V +AK G +S RK+F+ ME ++ + ++ G GEEA F DM
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 234 CKQ-RVKPDQHVL---SSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASV---LLTL 286
V P+ +V+ S + E L G +VHG +I G + F+ + L+ +
Sbjct: 301 NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD--FMVGIGNGLVNM 358
Query: 287 YANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQ---- 342
YA G + DA ++F + DKD V+WNSMI Q G ++ + R S++
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNG-------CFIEAVERYKSMRRHDI 411
Query: 343 IQGA-TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFK 401
+ G+ TLI+ L SC + G+QIH +K + V NAL+ +Y+E G + + K
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 402 AFVDIVCKDDSSWSSIIGTYKQNGME-SEALELCKEMLAEGITFTSYSLPLCISSCSQLL 460
F + D SW+SIIG ++ EA+ G + +S+ S L
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQV-KPNEVIYNAMI 519
+GKQ H A+K+ + +++I Y KCG M+ +K+F + + V +N+MI
Sbjct: 532 FGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 520 CGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKI 579
GY H+ +A+++ + + G + + +LSA + +E + + + + +
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV-RACL 650
Query: 580 KPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES--AWRTLLSACRNHNNTKIGEKSAK- 636
+ + S LVD Y + GRL+ A + + +W +++S H GE++ K
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQ---GEEALKL 707
Query: 637 ----KMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKT 675
K+ P DH +++ + + G EE E M+ +
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDS 750
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 159/577 (27%), Positives = 291/577 (50%), Gaps = 24/577 (4%)
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
H L ++ L++D + ++L+ Y G ++ A VF ++ R+ V+W ++SG+++ G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSV-SARKVFDEMPLRNCVSWACIVSGYSRNG 81
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV-----MQIHGLASKFGAETDAV 177
+ +M + EG+ + FVS+L+ C +G V QIHGL K DAV
Sbjct: 82 EHKEALVFLRDMVK-EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 178 VSSAMVDLYAKC-GDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
VS+ ++ +Y KC G V F +E K++ W+SIIS Y+ A F M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 237 RVKPDQHVLSSTL-RACVEIE-DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+P ++ S + AC E D+ Q+ + K+G D FV S L++ +A G L
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
A K+F +++ ++ V N +++ + G + +L +++ + + + + + +L S
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWG-EEATKLFMDMN--SMIDVSPESYVILLSS 317
Query: 355 CKNKS-----DLPAGRQIHSLVMKSS-VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
S L GR++H V+ + V +GN LV+MY++CG I DA + F +
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF 468
KD SW+S+I QNG EA+E K M I S++L +SSC+ L +G+Q
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 469 HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQA 528
H ++K G + +V V ++++ +YA+ G++ + +K+F + + ++V +N++I A ++
Sbjct: 438 HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERS 497
Query: 529 -KQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYS 587
+A+ F ++ G N++TF ++LSA S + E + L L K I E+ +
Sbjct: 498 LPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL-KNNIADEATTEN 556
Query: 588 CLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSA 621
L+ YG+ G ++ +I + W +++S
Sbjct: 557 ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 232/482 (48%), Gaps = 17/482 (3%)
Query: 153 CCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSS 212
C G H K + D + + +++ Y + GD S RK+FD M ++ W+
Sbjct: 13 CVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWAC 72
Query: 213 IISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNT--GVQVHGQMIK 270
I+SGY+ N +EA+ F +DM K+ + +Q+ S LRAC EI + G Q+HG M K
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 271 NGHQNDCFVASVLLTLYAN-FGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM 329
+ D V++VL+++Y G + A F I+ K+ V+WNS+I ++Q G S +
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS-AF 191
Query: 330 QLLQELHRTTSLQIQGATLIAILKSCK-NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVH 388
++ + S + + +C + D+ QI + KS + VG+ LV
Sbjct: 192 RIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVS 251
Query: 389 MYSECGQIGDAFKAFVDIVCKDDSSWSSI-IGTYKQNGMESEALELCKEMLAEGITFTSY 447
+++ G + A K F + ++ + + + +G +Q E EA +L +M + I +
Sbjct: 252 AFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGE-EATKLFMDMNSM-IDVSPE 309
Query: 448 SLPLCIS-----SCSQLLAINVGKQFHVFAIKSGY-NHDVYVGSSIIDMYAKCGHMEDSK 501
S + +S S ++ + + G++ H I +G + V +G+ +++MYAKCG + D++
Sbjct: 310 SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR 369
Query: 502 KVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG 561
+VF + V +N+MI G +G +A+E + + ++ + P T ++ LS+C+
Sbjct: 370 RVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLK 429
Query: 562 YIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK--DGSESAWRTLL 619
+ + + L K I + L+ Y G L E +I + + +W +++
Sbjct: 430 WAKLGQQIHGESL-KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII 488
Query: 620 SA 621
A
Sbjct: 489 GA 490
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/602 (33%), Positives = 327/602 (54%), Gaps = 13/602 (2%)
Query: 95 DACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
DA +F ++ +R L WN ++ ++ + V FS M+ E KPDN T LK C
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKAC 70
Query: 155 STLGEV---MQIHGLASK-FGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
L EV IHG K +D V S+++ +Y KCG + ++FD +E+ D W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 211 SSIISGYTVNNRGEEAVHFFKDMC-KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
SS++SG+ N +AV FF+ M V PD+ L + + AC ++ + G VHG +I
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 270 KNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM 329
+ G ND + + LL YA ++A LF+ I +KD+++W+++I + Q G + +
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 330 QLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHM 389
+ T + AT++ +L++C DL GR+ H L ++ + V ALV M
Sbjct: 251 VFNDMMDDGTEPNV--ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 390 YSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSL 449
Y +C +A+ F I KD SW ++I + NGM ++E ML E T L
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 450 PL-CISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQV 508
+ + SCS+L + K FH + IK G++ + ++G+S++++Y++CG + ++ KVF+
Sbjct: 369 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 509 KPNEVIYNAMICGYAHHGQAKQAIEIFT-MLEKNGVTPNQVTFLAMLSACSHAGYIEDTL 567
+ V++ ++I GY HG+ +A+E F M++ + V PN+VTFL++LSACSHAG I + L
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Query: 568 NLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRN 624
+F LM+ Y++ P EHY+ LVD GR G L+ A +I ++ + TLL ACR
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRI 548
Query: 625 HNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
H N ++ E AKK+ EL + Y+L+SN+Y +G+WE R + + G+KK S
Sbjct: 549 HQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAES 608
Query: 685 WL 686
+
Sbjct: 609 LI 610
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 173/675 (25%), Positives = 284/675 (42%), Gaps = 75/675 (11%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R++ W TL+ S R + F+ M +E+P+ +T V L+AC N G
Sbjct: 20 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 79
Query: 61 LQIHGVLVRS-GLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
IHG + + L D + GSSL+YMY G + +A +F +L + D+V W+ M+SGF
Sbjct: 80 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMI-EALRMFDELEKPDIVTWSSMVSGFE 138
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDA 176
+ G F M + PD T ++L+ C+ L +HG + G D
Sbjct: 139 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 198
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ +++++ YAK +F + EKD WS++I+ Y N EA+ F DM
Sbjct: 199 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 258
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+P+ + L+AC DL G + H I+ G + + V++ L+ +Y +A
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 318
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+F RI KD+V+W ++I G + RS++ + + + ++ +L SC
Sbjct: 319 YAVFSRIPRKDVVSWVALISGFTLNGM-AHRSIEEFSIMLLENNTRPDAILMVKVLGSCS 377
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS 416
L + HS V+K +G +LV +YS CG +G+A K F I KD W+S
Sbjct: 378 ELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTS 437
Query: 417 IIGTYKQNGMESEALELCKEMLAEG------ITFTSYSLPLCISSCSQLLAINVGKQFHV 470
+I Y +G ++ALE M+ +TF S +S+CS I+ G +
Sbjct: 438 LITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLS-----ILSACSHAGLIHEG--LRI 490
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQ 530
F + V D ++ PN Y ++ G
Sbjct: 491 FKL----------------------------MVNDYRLAPNLEHYAVLVDLLGRVGDLDT 522
Query: 531 AIEIFTMLEKNGVTPNQVTFLAMLSACS--HAGYIEDTL--NLFTLMLYKYKIKPESEH- 585
AIEI ++ +P +L AC G + +T+ LF L ES H
Sbjct: 523 AIEI---TKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFEL---------ESNHA 570
Query: 586 --YSCLVDAYGRAGRLEEAYQI---VQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIE 640
Y + + YG G E ++ V++ G + L R + + + E
Sbjct: 571 GYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADD------E 624
Query: 641 LNPSDHASYILLSNI 655
L+P Y LL +
Sbjct: 625 LHPEKEPVYGLLKEL 639
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 210/707 (29%), Positives = 369/707 (52%), Gaps = 65/707 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+VV+W +IS +R G KA ++ M P+ +T + +L AC+ G
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFG 157
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++ HGV V++GL+++ F G++L+ MY+ G + VF L + + V++ +I G A+
Sbjct: 158 MRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLAR 217
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC------CSTLGEVM------QIHGLAS 168
++F M E +G++ D+ ++L C +L E+ QIH LA
Sbjct: 218 ENKVLEAVQMFRLMCE-KGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLAL 276
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVH 228
+ G D ++++++++YAK D++ IF M E + W+ +I G+ R +++V
Sbjct: 277 RLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVE 336
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F M +P++ S L AC D+ TG
Sbjct: 337 FLTRMRDSGFQPNEVTCISVLGACFRSGDVETG--------------------------- 369
Query: 289 NFGGLRDAEKLFRRIDDKDIVAWNSMI-----LAHAQLGQGSSRSMQLLQELHRTTSLQI 343
++F I + AWN+M+ H + + R MQ +L+
Sbjct: 370 --------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF-------QNLKP 414
Query: 344 QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF 403
TL IL SC L G+QIH +V+++ +S + + + L+ +YSEC ++ + F
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIF 474
Query: 404 VDIVCK-DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTS-YSLPLCISSCSQLLA 461
D + + D + W+S+I ++ N ++++AL L + M + + S +SSCS+L +
Sbjct: 475 DDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCS 534
Query: 462 INVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICG 521
+ G+QFH +KSGY D +V +++ DMY KCG ++ +++ FDA ++ N VI+N MI G
Sbjct: 535 LLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHG 594
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKP 581
Y H+G+ +A+ ++ + +G P+ +TF+++L+ACSH+G +E L + + M + I+P
Sbjct: 595 YGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEP 654
Query: 582 ESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESA---WRTLLSACRNHNNTKIGEKSAKKM 638
E +HY C+VD GRAGRLE+A ++ + +S+ W LLS+CR H + + + A+K+
Sbjct: 655 ELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKL 714
Query: 639 IELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSW 685
+ L+P A+Y+LLSN Y +W+++ + M K V K PG SW
Sbjct: 715 MRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 170/713 (23%), Positives = 318/713 (44%), Gaps = 129/713 (18%)
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNG----------------------------- 90
G IHG +VR G++ D + + L+ +Y G
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 91 -SNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVS 149
+L +AC VF + ERD+V+WN MIS + G ++ M +G P T S
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM-VCDGFLPSRFTLAS 143
Query: 150 LLKCCSTLGE---VMQIHGLASKFGAETDAVVSSAMVDLYAKCG-DVSSCRKIFDSMEEK 205
+L CS + + M+ HG+A K G + + V +A++ +YAKCG V ++F+S+ +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNT----- 260
+ ++++I G N+ EAV F+ MC++ V+ D LS+ L E ++
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 261 ----GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMIL 316
G Q+H ++ G D + + LL +YA + AE +F + + ++V+WN MI+
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 317 AHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSV 376
Q + S +S++ L + R + Q T I++L +C D+ GR+I SS+
Sbjct: 324 GFGQEYR-SDKSVEFLTRM-RDSGFQPNEVTCISVLGACFRSGDVETGRRIF-----SSI 376
Query: 377 SHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKE 436
P++ S+W++++ Y EA+ ++
Sbjct: 377 PQPSV------------------------------SAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 437 MLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGH 496
M + + +L + +SSC++L + GKQ H I++ + + ++ S +I +Y++C
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 497 MEDSKKVFDAQVKPNEV-IYNAMICGYAHHGQAKQAIEIFTMLEKNGV-TPNQVTFLAML 554
ME S+ +FD + ++ +N+MI G+ H+ +A+ +F + + V PN+ +F +L
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526
Query: 555 SACSH----------------AGYIEDTLNLFTL--------------MLYKYKIKPESE 584
S+CS +GY+ D+ L + ++ +
Sbjct: 527 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV 586
Query: 585 HYSCLVDAYGRAGRLEEAYQIVQKDGSES------AWRTLLSACRNHNNTKIGEK---SA 635
++ ++ YG GR +EA + +K S + ++L+AC + + G + S
Sbjct: 587 IWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 646
Query: 636 KKMIELNPS-DHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWLI 687
+++ + P DH YI + + G+ E+A EK+A+ K W I
Sbjct: 647 QRIHGIEPELDH--YICIVDCLGRAGRLEDA----EKLAEATPYKSSSVLWEI 693
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/534 (21%), Positives = 229/534 (42%), Gaps = 94/534 (17%)
Query: 144 NRTFVSLLKC-----CSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKI 198
N+ SLL+C C G+V IHG + G ++D + + ++DLY +CGD RK+
Sbjct: 6 NKYLASLLRCYRDERCKLSGKV--IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKV 63
Query: 199 FDSME-------------------------------EKDNFVWSSIISGYTVNNRGEEAV 227
FD M E+D W+++IS E+A+
Sbjct: 64 FDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKAL 123
Query: 228 HFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLY 287
+K M P + L+S L AC ++ D G++ HG +K G + FV + LL++Y
Sbjct: 124 VVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMY 183
Query: 288 ANFGGLRD-AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQ--ELHRTTSLQIQ 344
A G + D ++F + + V++ ++I A+ ++ ++ +Q L +Q+
Sbjct: 184 AKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLAR----ENKVLEAVQMFRLMCEKGVQVD 239
Query: 345 GATLIAIL------KSCKNKSDLPA---GRQIHSLVMKSSVSHPTLVGNALVHMYSECGQ 395
L IL + C + S++ G+QIH L ++ + N+L+ +Y++
Sbjct: 240 SVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKD 299
Query: 396 IGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS 455
+ A F ++ + SW+ +I + Q +++E M
Sbjct: 300 MNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR----------------- 342
Query: 456 CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIY 515
SG+ + S++ + G +E +++F + +P+ +
Sbjct: 343 ------------------DSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAW 384
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY 575
NAM+ GY+++ ++AI F ++ + P++ T +LS+C+ ++E + +++
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI- 443
Query: 576 KYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSE---SAWRTLLSACRNHN 626
+ +I S S L+ Y ++E + I +E + W +++S R HN
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFR-HN 496
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 348 bits (894), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 207/689 (30%), Positives = 372/689 (53%), Gaps = 17/689 (2%)
Query: 12 LISSHLRAGSVPKAFQLFNDMRVMDERP-NEYTFSVLLRACATPALWNVGLQIHGVLVRS 70
LI HL AG + A + M RP + TFS LL++C + +G +H L+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 71 GLERDKFAGSSLVYMYSNNGSNLR--DACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQ 128
+E D +SL+ +YS +G + + D +RD+V+W+ M++ + G
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 129 RLFSEMWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFG-AETDAVVSSAMVD 184
++F E E+ GL P++ + ++++ CS +G G K G E+D V +++D
Sbjct: 152 KVFVEFLEL-GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210
Query: 185 LYAKC-GDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQH 243
++ K + K+FD M E + W+ +I+ EA+ FF DM + D+
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF---GGLRDAEKLF 300
LSS AC E+E+L+ G Q+H I++G +D V L+ +YA G + D K+F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVF 328
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
R++D +++W ++I + + ++ ++ L E+ ++ T + K+C N SD
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
G+Q+ K ++ + V N+++ M+ + ++ DA +AF + K+ S+++ +
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 421 YKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD 480
+N +A +L E+ + ++++ +S + + +I G+Q H +K G + +
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK 540
V +++I MY+KCG ++ + +VF+ N + + +MI G+A HG A + +E F + +
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Query: 541 NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLE 600
GV PN+VT++A+LSACSH G + + F M +KIKP+ EHY+C+VD RAG L
Sbjct: 569 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628
Query: 601 EAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYI 657
+A++ + ++ WRT L ACR H+NT++G+ +A+K++EL+P++ A+YI LSNIY
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYA 688
Query: 658 EEGKWEEARDCREKMAKTGVKKDPGSSWL 686
GKWEE+ + R KM + + K+ G SW+
Sbjct: 689 CAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 170/619 (27%), Positives = 287/619 (46%), Gaps = 59/619 (9%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R+VV+W+ +++ + G A ++F + + PN+Y ++ ++RAC+ VG
Sbjct: 129 RDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVT 188
Query: 64 HGVLVRSG-LERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
G L+++G E D G SL+ M+ ++ +A VF + E ++V W +MI+ Q+G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVS 179
R F +M + G + D T S+ C+ L + Q+H A + G D V
Sbjct: 249 FPREAIRFFLDM-VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305
Query: 180 SAMVDLYAKC---GDVSSCRKIFDSMEEKDNFVWSSIISGYTVN-NRGEEAVHFFKDMCK 235
++VD+YAKC G V CRK+FD ME+ W+++I+GY N N EA++ F +M
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 236 Q-RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
Q V+P+ SS +AC + D G QV GQ K G ++ VA+ +++++ +
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
DA++ F + +K++V++N+ + + ++ +LL E+ L + T ++L
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCR-NLNFEQAFKLLSEITE-RELGVSAFTFASLLSG 483
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
N + G QIHS V+K +S V NAL+ MYS+CG I A + F + ++ SW
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+S+I + ++G LE +M+ EG+ + +S+CS HV +
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS-----------HVGLVS 592
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
G+ H MY D ++KP Y M+ G A E
Sbjct: 593 EGWRH-------FNSMYE------------DHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 535 FTMLEKNGVTPNQVTFL---AMLSACSHAGYIEDTLNLFTLMLYK-YKIKP-ESEHYSCL 589
+ P Q L L AC + L L K ++ P E Y L
Sbjct: 634 INTM------PFQADVLVWRTFLGACR----VHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 590 VDAYGRAGRLEEAYQIVQK 608
+ Y AG+ EE+ ++ +K
Sbjct: 684 SNIYACAGKWEESTEMRRK 702
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 213/431 (49%), Gaps = 20/431 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M NVVTWT +I+ ++ G +A + F DM + +++T S + ACA ++G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMY---SNNGSNLRDACCVFHDLLERDLVAWNVMISG 117
Q+H +RSGL D SLV MY S +GS + D VF + + +++W +I+G
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGS-VDDCRKVFDRMEDHSVMSWTALITG 345
Query: 118 FAQVGDFCM-VQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAE 173
+ + + LFSEM ++P++ TF S K C L + Q+ G A K G
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+++ V+++++ ++ K + ++ F+S+ EK+ +++ + G N E+A ++
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
++ + +S L + + G Q+H Q++K G + V + L+++Y+ G +
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTT--SLQIQGATLIAI 351
A ++F ++++++++W SMI A+ G ++++L+ ++ ++ T +AI
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHG----FAIRVLETFNQMIEEGVKPNEVTYVAI 581
Query: 352 LKSCKNKSDLPAG-RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC-- 408
L +C + + G R +S+ + +V + G + DAF+ F++ +
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE-FINTMPFQ 640
Query: 409 KDDSSWSSIIG 419
D W + +G
Sbjct: 641 ADVLVWRTFLG 651
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 199/640 (31%), Positives = 342/640 (53%), Gaps = 19/640 (2%)
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G +HG ++R+G + LV Y+ G L A +F+ ++ +D+V+WN +I+G++
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCG-KLAKAHSIFNAIICKDVVSWNSLITGYS 91
Query: 120 QVGDFC---MVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAE 173
Q G V +LF EM + + P+ T + K S+L Q H L K +
Sbjct: 92 QNGGISSSYTVMQLFREM-RAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSF 150
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
D V +++V +Y K G V K+F M E++ + WS+++SGY R EEA+ F
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210
Query: 234 CKQRVK--PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFG 291
+++ + +V ++ L + + G Q+H IKNG +++ L+T+Y+
Sbjct: 211 LREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCE 270
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA--TLI 349
L +A K+F D++ + W++M+ ++Q G+ S++ ++ R S I+ + T++
Sbjct: 271 SLNEACKMFDSSGDRNSITWSAMVTGYSQNGE----SLEAVKLFSRMFSAGIKPSEYTIV 326
Query: 350 AILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK 409
+L +C + L G+Q+HS ++K ALV MY++ G + DA K F + +
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 410 DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFH 469
D + W+S+I Y QN EAL L + M GI ++ + +CS L + +GKQ H
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 470 VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAK 529
IK G+ +V +GS++ MY+KCG +ED VF + V +NAMI G +H+GQ
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506
Query: 530 QAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCL 589
+A+E+F + G+ P+ VTF+ ++SACSH G++E F +M + + P+ +HY+C+
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566
Query: 590 VDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDH 646
VD RAG+L+EA + ++ D WR LLSAC+NH ++G + +K++ L +
Sbjct: 567 VDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRES 626
Query: 647 ASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
++Y+ LS IY G+ + + M GV K+ G SW+
Sbjct: 627 STYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/538 (28%), Positives = 274/538 (50%), Gaps = 12/538 (2%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAF---QLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
++VV+W +LI+ + + G + ++ QLF +MR D PN YT + + +A ++ VG
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q H ++V+ D + +SLV MY G + D VF + ER+ W+ M+SG+A
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGL-VEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 121 VGDFCMVQRLFSE-MWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFGAETDA 176
G ++F+ + E E + F ++L + +G QIH + K G
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+S+A+V +Y+KC ++ K+FDS ++++ WS++++GY+ N EAV F M
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+KP ++ + L AC +I L G Q+H ++K G + F + L+ +YA G L DA
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
K F + ++D+ W S+I + Q + +L +T + T+ ++LK+C
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQ--NSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS 416
+ + L G+Q+H +K +G+AL MYS+CG + D F KD SW++
Sbjct: 435 SLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNA 494
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQFHVFAIKS 475
+I NG EALEL +EMLAEG+ + IS+CS + G F++ + +
Sbjct: 495 MISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQI 554
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFD-AQVKPNEVIYNAMICGYAHHGQAKQAI 532
G + V + ++D+ ++ G ++++K+ + A + ++ ++ +HG+ + +
Sbjct: 555 GLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGV 612
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 226/411 (54%), Gaps = 11/411 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFN-DMRVMDERPN-EYTFSVLLRACATPALWN 58
MP RN TW+T++S + G V +A ++FN +R +E + +Y F+ +L + A
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
+G QIH + +++GL ++LV MYS S L +AC +F +R+ + W+ M++G+
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCES-LNEACKMFDSSGDRNSITWSAMVTGY 297
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFGAETD 175
+Q G+ +LFS M+ G+KP T V +L CS L E Q+H K G E
Sbjct: 298 SQNGESLEAVKLFSRMFSA-GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
++A+VD+YAK G ++ RK FD ++E+D +W+S+ISGY N+ EEA+ ++ M
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+ P+ ++S L+AC + L G QVHG IK+G + + S L T+Y+ G L D
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLED 476
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
+FRR +KD+V+WN+MI + GQG +++L +E+ ++ T + I+ +C
Sbjct: 477 GNLVFRRTPNKDVVSWNAMISGLSHNGQG-DEALELFEEM-LAEGMEPDDVTFVNIISAC 534
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAFVD 405
+K + G +++ P + A +V + S GQ+ +A K F++
Sbjct: 535 SHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA-KEFIE 584
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 206/400 (51%), Gaps = 9/400 (2%)
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ + P L L + +L G VHGQ+I+ G A+VL+ YA G L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSR--SMQLLQELHRTTSLQIQGATLIAIL 352
A +F I KD+V+WNS+I ++Q G SS MQL +E+ R + TL I
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREM-RAQDILPNAYTLAGIF 125
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS 412
K+ + GRQ H+LV+K S V +LV MY + G + D K F + ++
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGI--TFTSYSLPLCISSCSQLLAINVGKQFHV 470
+WS+++ Y G EA+++ L E + + Y +SS + + + +G+Q H
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHC 245
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQ 530
IK+G V + ++++ MY+KC + ++ K+FD+ N + ++AM+ GY+ +G++ +
Sbjct: 246 ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLE 305
Query: 531 AIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLV 590
A+++F+ + G+ P++ T + +L+ACS Y+E+ L + +L K + + LV
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL-KLGFERHLFATTALV 364
Query: 591 DAYGRAGRLEEAYQIVQ--KDGSESAWRTLLSA-CRNHNN 627
D Y +AG L +A + ++ + W +L+S +N +N
Sbjct: 365 DMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 167/336 (49%), Gaps = 14/336 (4%)
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
T L +TL+ L + +L AGR +H ++++ S N LV+ Y++CG++
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEA---LELCKEMLAEGITFTSYSLPLCISS 455
A F I+CKD SW+S+I Y QNG S + ++L +EM A+ I +Y+L +
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 456 CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIY 515
S L + VG+Q H +K D+YV +S++ MY K G +ED KVF + N +
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 516 NAMICGYAHHGQAKQAIEIFTML--EKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
+ M+ GYA G+ ++AI++F + EK + + F A+LS+ + Y+ + +
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 574 LYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESA--WRTLLSACRNHNNTKIG 631
+ K + + LV Y + L EA ++ G ++ W +++ + +
Sbjct: 248 I-KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 632 EKSAKKMIE--LNPSDHASYILL---SNI-YIEEGK 661
K +M + PS++ +L S+I Y+EEGK
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK 342
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+ R+V WT+LIS +++ +A L+ M+ PN+ T + +L+AC++ A +G
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+HG ++ G + GS+L MYS GS L D VF +D+V+WN MISG +
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGS-LEDGNLVFRRTPNKDVVSWNAMISGLSH 501
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G LF EM EG++PD+ TFV+++ CS G V + + ++ + G +
Sbjct: 502 NGQGDEALELFEEML-AEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKV 560
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDS 201
+ MVDL ++ G + ++ +S
Sbjct: 561 DHYACMVDLLSRAGQLKEAKEFIES 585
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 210/653 (32%), Positives = 351/653 (53%), Gaps = 20/653 (3%)
Query: 47 LLRAC--ATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL- 103
LLR C +T +L + L +H ++ GL RD SL+ +Y +D C H
Sbjct: 9 LLRECTNSTKSLRRIKL-VHQRILTLGLRRDVVLCKSLINVYFT----CKDHCSARHVFE 63
Query: 104 ---LERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV 160
+ D+ WN ++SG+++ F +F + PD+ TF +++K LG
Sbjct: 64 NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE 123
Query: 161 M---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGY 217
IH L K G D VV+S++V +YAK + ++FD M E+D W+++IS +
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 218 TVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDC 277
+ E+A+ F M +P+ L+ + AC + L G ++H + +K G + D
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 278 FVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHR 337
+V S L+ +Y L A ++F+++ K +VAWNSMI + + +G S+S +
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGY--VAKGDSKSCVEILNRMI 301
Query: 338 TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIG 397
+ TL +IL +C +L G+ IH V++S V+ V +L+ +Y +CG+
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEAN 361
Query: 398 DAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCS 457
A F SW+ +I +Y G +A+E+ +M++ G+ + + +CS
Sbjct: 362 LAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS 421
Query: 458 QLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNA 517
QL A+ GKQ H+ +S D + S+++DMY+KCG+ +++ ++F++ K + V +
Sbjct: 422 QLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTV 481
Query: 518 MICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKY 577
MI Y HGQ ++A+ F ++K G+ P+ VT LA+LSAC HAG I++ L F+ M KY
Sbjct: 482 MISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKY 541
Query: 578 KIKPESEHYSCLVDAYGRAGRLEEAYQIVQK--DGSESA--WRTLLSACRNHNNTKIGEK 633
I+P EHYSC++D GRAGRL EAY+I+Q+ + S++A TL SAC H +G++
Sbjct: 542 GIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDR 601
Query: 634 SAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
A+ ++E P D ++Y++L N+Y W+ AR R KM + G++K PG SW+
Sbjct: 602 IARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 242/506 (47%), Gaps = 13/506 (2%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER---PNEYTFSVLLRACATPALWNVGL 61
+V W +L+S + + ++F R+++ P+ +TF +++A +G
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFK--RLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
IH ++V+SG D SSLV MY+ ++ VF ++ ERD+ +WN +IS F Q
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNL-FENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFGAETDAVV 178
G+ LF M E G +P++ + + CS L +IH K G E D V
Sbjct: 187 GEAEKALELFGRM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
+SA+VD+Y KC + R++F M K W+S+I GY + V M +
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK 298
+P Q L+S L AC +L G +HG +I++ D +V L+ LY G AE
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 299 LFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
+F + +WN MI ++ +G +++++ ++ + ++ T ++L +C
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNW-FKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQL 423
Query: 359 SDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII 418
+ L G+QIH + +S + L+ +AL+ MYS+CG +AF+ F I KD SW+ +I
Sbjct: 424 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMI 483
Query: 419 GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQFHVFAIKSGY 477
Y +G EAL EM G+ +L +S+C I+ G K F K G
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543
Query: 478 NHDVYVGSSIIDMYAKCGHMEDSKKV 503
+ S +ID+ + G + ++ ++
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAYEI 569
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 180/372 (48%), Gaps = 7/372 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+V +W T+IS ++G KA +LF M PN + +V + AC+ G
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IH V+ G E D++ S+LV MY L A VF + + LVAWN MI G+
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDC-LEVAREVFQKMPRKSLVAWNSMIKGYVA 286
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAV 177
GD + + M +EG +P T S+L CS ++ IHG + D
Sbjct: 287 KGDSKSCVEILNRMI-IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V+ +++DLY KCG+ + +F ++ W+ +IS Y +AV + M
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
VKPD +S L AC ++ L G Q+H + ++ + D + S LL +Y+ G ++A
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
++F I KD+V+W MI A+ GQ Q E+ + L+ G TL+A+L +C +
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQ-FDEMQK-FGLKPDGVTLLAVLSACGH 523
Query: 358 KSDLPAGRQIHS 369
+ G + S
Sbjct: 524 AGLIDEGLKFFS 535
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 203/679 (29%), Positives = 356/679 (52%), Gaps = 17/679 (2%)
Query: 13 ISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGL 72
+SSH G + F+ M P+ +TF LL+ACA+ + GL IH ++ +G
Sbjct: 21 LSSH---GDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 73 ERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFS 132
D + SSLV +Y+ G L A VF ++ ERD+V W MI +++ G L +
Sbjct: 78 SSDFYISSSLVNLYAKFGL-LAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVN 136
Query: 133 EMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDV 192
EM +G+KP T + +L + ++ +H A +G + D V ++M++LY KC V
Sbjct: 137 EM-RFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHV 195
Query: 193 SSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRAC 252
+ +FD ME++D W+++ISGY E + M ++PDQ ++L
Sbjct: 196 GDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVS 255
Query: 253 VEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWN 312
+ DL G +H Q++K G D + + L+T+Y G + ++ I +KD+V W
Sbjct: 256 GTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWT 315
Query: 313 SMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVM 372
MI +LG+ + +++ + E+ ++ S + + +++ SC G +H V+
Sbjct: 316 VMISGLMRLGR-AEKALIVFSEMLQSGS-DLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 373 KSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALE 432
+ + T N+L+ MY++CG + + F + +D SW++II Y QN +AL
Sbjct: 374 RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALL 433
Query: 433 LCKEMLAEGI----TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSII 488
L +EM + + +FT SL + +CS A+ VGK H I+S V ++++
Sbjct: 434 LFEEMKFKTVQQVDSFTVVSL---LQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALV 490
Query: 489 DMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQV 548
DMY+KCG++E +++ FD+ + V + +I GY HG+ A+EI++ +G+ PN V
Sbjct: 491 DMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHV 550
Query: 549 TFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
FLA+LS+CSH G ++ L +F+ M+ + ++P EH +C+VD RA R+E+A++ ++
Sbjct: 551 IFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKE 610
Query: 609 DGSESAWRTL---LSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEA 665
+ + + L L ACR + T++ + + MIEL P D Y+ L + + +W++
Sbjct: 611 NFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDV 670
Query: 666 RDCREKMAKTGVKKDPGSS 684
+ +M G+KK PG S
Sbjct: 671 SESWNQMRSLGLKKLPGWS 689
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 147/513 (28%), Positives = 264/513 (51%), Gaps = 20/513 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R+VV WT +I + RAG V +A L N+MR +P T +L + L
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML----SGVLEITQ 162
Query: 61 LQ-IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
LQ +H V G + D +S++ +Y ++ DA +F + +RD+V+WN MISG+A
Sbjct: 163 LQCLHDFAVIYGFDCDIAVMNSMLNLYC-KCDHVGDAKDLFDQMEQRDMVSWNTMISGYA 221
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDA 176
VG+ + +L M +GL+PD +TF + L T+ ++ +H K G + D
Sbjct: 222 SVGNMSEILKLLYRM-RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDM 280
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ +A++ +Y KCG + ++ +++ KD W+ +ISG R E+A+ F +M +
Sbjct: 281 HLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQS 340
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
++S + +C ++ + G VHG ++++G+ D + L+T+YA G L +
Sbjct: 341 GSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKS 400
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+F R++++D+V+WN++I +AQ +++ L +E+ T Q+ T++++L++C
Sbjct: 401 LVIFERMNERDLVSWNAIISGYAQ-NVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACS 459
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS 416
+ LP G+ IH +V++S + +LV ALV MYS+CG + A + F I KD SW
Sbjct: 460 SAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGI 519
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHV-----F 471
+I Y +G ALE+ E L G+ +SSCS + G + F
Sbjct: 520 LIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDF 579
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
++ + H + ++D+ + +ED+ K +
Sbjct: 580 GVEPNHEH----LACVVDLLCRAKRIEDAFKFY 608
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 208/689 (30%), Positives = 367/689 (53%), Gaps = 33/689 (4%)
Query: 13 ISSHLRAGSVPKAFQLFND---MRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVR 69
IS LR S +A +F + + +E T + L+AC G QIHG
Sbjct: 47 ISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGD--LKRGCQIHGFSTT 104
Query: 70 SGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQR 129
SG ++++ MY G +A C+F +L++ D+V+WN ++SGF D +
Sbjct: 105 SGFTSFVCVSNAVMGMYRKAG-RFDNALCIFENLVDPDVVSWNTILSGF----DDNQIAL 159
Query: 130 LFSEMWEVEGLKPDNRTFVSLLKCCS-----TLGEVMQIHGLASKFGAETDAVVSSAMVD 184
F + G+ D T+ + L C LG +Q+ K G E+D VV ++ +
Sbjct: 160 NFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLG--LQLQSTVVKTGLESDLVVGNSFIT 217
Query: 185 LYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNR-GEEAVHFFKDMCKQRVKPDQH 243
+Y++ G R++FD M KD W+S++SG + G EAV F+DM ++ V+ D
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHV 277
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRI 303
+S + C DL Q+HG IK G+++ V ++L++ Y+ G L + +F ++
Sbjct: 278 SFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQM 337
Query: 304 DDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPA 363
++++V+W +MI ++ +M R + T + ++ + K +
Sbjct: 338 SERNVVSWTTMISSNKDDAVSIFLNM-------RFDGVYPNEVTFVGLINAVKCNEQIKE 390
Query: 364 GRQIHSLVMKSS-VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYK 422
G +IH L +K+ VS P+ VGN+ + +Y++ + DA KAF DI ++ SW+++I +
Sbjct: 391 GLKIHGLCIKTGFVSEPS-VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFA 449
Query: 423 QNGMESEALELCKEMLAEGITFTSYSLPLCISSCS--QLLAINVGKQFHVFAIKSGYNHD 480
QNG EAL++ AE + Y+ +++ + + +++ G++ H +K G N
Sbjct: 450 QNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSC 508
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK 540
V S+++DMYAK G++++S+KVF+ + N+ ++ ++I Y+ HG + + +F + K
Sbjct: 509 PVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
Query: 541 NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLE 600
V P+ VTFL++L+AC+ G ++ +F +M+ Y ++P EHYSC+VD GRAGRL+
Sbjct: 569 ENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLK 628
Query: 601 EAYQI---VQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYI 657
EA ++ V ES +++L +CR H N K+G K A+ +E+ P SY+ + NIY
Sbjct: 629 EAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYA 688
Query: 658 EEGKWEEARDCREKMAKTGVKKDPGSSWL 686
E+ +W++A + R+ M K V K+ G SW+
Sbjct: 689 EKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 22/313 (7%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M RNVV+WTT+ISS+ A +F +MR PNE TF L+ A G
Sbjct: 337 MSERNVVSWTTMISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
L+IHG+ +++G + G+S + +Y+ + L DA F D+ R++++WN MISGFAQ
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEA-LEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS-----TLGEVMQIHGLASKFGAETD 175
G ++F + P+ TF S+L + ++ + + H K G +
Sbjct: 451 NGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSC 508
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
VVSSA++D+YAK G++ K+F+ M +K+ FVW+SIIS Y+ + E ++ F M K
Sbjct: 509 PVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI-----KNGHQNDCFVASVLLTLYANF 290
+ V PD S L AC ++ G ++ MI + H++ S ++ +
Sbjct: 569 ENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH----YSCMVDMLGRA 624
Query: 291 GGLRDAEKLFRRI 303
G L++AE+L +
Sbjct: 625 GRLKEAEELMSEV 637
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 202/632 (31%), Positives = 339/632 (53%), Gaps = 16/632 (2%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
Q HGVL +GL D + LV +Y G +DA VF + E D W VM+ +
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYT-KDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVV 178
+ V +L+ + + G + D+ F LK C+ L ++ +IH K D VV
Sbjct: 121 KESVEVVKLYDLLMK-HGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKV-PSFDNVV 178
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
+ ++D+YAKCG++ S K+F+ + ++ W+S+I+GY N+ EE + F M + V
Sbjct: 179 LTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ-NDCFVASVLLTLYANFGGLRDAE 297
+++ + + AC ++ L+ G HG ++K+G + + C V S LL +Y G + +A
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS-LLDMYVKCGDISNAR 297
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
++F D+V W +MI+ + G + ++ L Q++ + ++ T+ ++L C
Sbjct: 298 RVFNEHSHVDLVMWTAMIVGYTHNGS-VNEALSLFQKM-KGVEIKPNCVTIASVLSGCGL 355
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
+L GR +H L +K + T V NALVHMY++C Q DA F KD +W+SI
Sbjct: 356 IENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 418 IGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGY 477
I + QNG EAL L M +E +T ++ S+C+ L ++ VG H +++K G+
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
Query: 478 --NHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF 535
+ V+VG++++D YAKCG + ++ +FD + N + ++AMI GY G ++E+F
Sbjct: 475 LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELF 534
Query: 536 TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGR 595
+ K PN+ TF ++LSAC H G + + F+ M Y P ++HY+C+VD R
Sbjct: 535 EEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLAR 594
Query: 596 AGRLEEAYQIVQKDGSESAWR---TLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILL 652
AG LE+A I++K + R L C H+ +GE KKM++L+P D + Y+L+
Sbjct: 595 AGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLV 654
Query: 653 SNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
SN+Y +G+W +A++ R M + G+ K G S
Sbjct: 655 SNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 168/613 (27%), Positives = 282/613 (46%), Gaps = 52/613 (8%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P + W ++ + + +L++ + R ++ FS L+AC + G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IH LV+ D + L+ MY+ G ++ A VF+D+ R++V W MI+G+ +
Sbjct: 162 KKIHCQLVKVP-SFDNVVLTGLLDMYAKCG-EIKSAHKVFNDITLRNVVCWTSMIAGYVK 219
Query: 121 VGDFCMVQR-LFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDA 176
D C LF+ M E + + T+ +L+ C+ L + Q HG K G E +
Sbjct: 220 -NDLCEEGLVLFNRMRE-NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSS 277
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ ++++D+Y KCGD+S+ R++F+ D +W+++I GYT N EA+ F+ M
Sbjct: 278 CLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV 337
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+KP+ ++S L C IE+L G VHG IK G D VA+ L+ +YA RDA
Sbjct: 338 EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDA 396
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+ +F +KDIVAWNS+I +Q GS L + S+ G T+ ++ +C
Sbjct: 397 KYVFEMESEKDIVAWNSIISGFSQ--NGSIHEALFLFHRMNSESVTPNGVTVASLFSACA 454
Query: 357 NKSDLPAGRQIHSLVMKSS--VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
+ L G +H+ +K S VG AL+ Y++CG A F I K+ +W
Sbjct: 455 SLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITW 514
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
S++IG Y + G +LEL +EML + + +S+C +N GK++
Sbjct: 515 SAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKY------ 568
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
MY D P+ Y M+ A G+ +QA++I
Sbjct: 569 ------------FSSMYK------------DYNFTPSTKHYTCMVDMLARAGELEQALDI 604
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK-YKIKPESEHYSCLV-DA 592
+EK + P+ F A L C + +L +++ K + P+ Y LV +
Sbjct: 605 ---IEKMPIQPDVRCFGAFLHGCG----MHSRFDLGEIVIKKMLDLHPDDASYYVLVSNL 657
Query: 593 YGRAGRLEEAYQI 605
Y GR +A ++
Sbjct: 658 YASDGRWNQAKEV 670
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/564 (26%), Positives = 263/564 (46%), Gaps = 46/564 (8%)
Query: 150 LLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
LL C+ + + Q HG+ + G D +++ +V LY G R +FD + E D ++
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
W ++ Y +N E V + + K + D V S L+AC E++DL+ G ++H Q++
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 270 KNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM 329
K D V + LL +YA G ++ A K+F I +++V W SMI + + +
Sbjct: 170 KVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVK-NDLCEEGL 227
Query: 330 QLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHM 389
L + L + T ++ +C S L G+ H ++KS + + + +L+ M
Sbjct: 228 VLFNRMRENNVLGNE-YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 390 YSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSL 449
Y +CG I +A + F + D W+++I Y NG +EAL L ++M I ++
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 450 PLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK 509
+S C + + +G+ H +IK G D V ++++ MYAKC D+K VF+ + +
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESE 405
Query: 510 PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG--YIEDTL 567
+ V +N++I G++ +G +A+ +F + VTPN VT ++ SAC+ G + +L
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 568 NLFTLML-----------------YKYKIKPESEH-------------YSCLVDAYGRAG 597
+ +++ L Y P+S +S ++ YG+ G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQG 525
Query: 598 ------RLEEAYQIVQKDGSESAWRTLLSACRNHNNTKIGEK---SAKKMIELNPSDHAS 648
L E Q+ +ES + ++LSAC + G+K S K PS
Sbjct: 526 DTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST-KH 584
Query: 649 YILLSNIYIEEGKWEEARDCREKM 672
Y + ++ G+ E+A D EKM
Sbjct: 585 YTCMVDMLARAGELEQALDIIEKM 608
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 451 LCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKP 510
L +S C+ + ++ +Q H +G D+ + + ++ +Y G+ +D++ VFD +P
Sbjct: 49 LLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 511 NEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLF 570
+ ++ M+ Y + ++ + ++++ +L K+G + + F L AC+ ++D N
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE---LQDLDNGK 162
Query: 571 TLMLYKYKIKPESEH--YSCLVDAYGRAGRLEEAYQI 605
+ K+ P ++ + L+D Y + G ++ A+++
Sbjct: 163 KIHCQLVKV-PSFDNVVLTGLLDMYAKCGEIKSAHKV 198
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 213/711 (29%), Positives = 372/711 (52%), Gaps = 37/711 (5%)
Query: 1 MPHRNVVTW-------------TTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSV- 46
MP RN+VT ++L S ++ GS FQ+ M + NE SV
Sbjct: 48 MPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS----FQMIFFMPL-----NEIASSVV 98
Query: 47 -LLRACATPALWNVGLQIHGVLVRSGL---ERDKFAGSSLVYMYSNNGSNLRDACCVFHD 102
L R C + + QIH +++ +G +A ++L+ MY GS L A VF
Sbjct: 99 ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGS-LEQARKVFDK 157
Query: 103 LLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ 162
+ R++V++N + S +++ DF + E +KP++ TF SL++ C+ L +V+
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLM 217
Query: 163 IHGLAS---KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTV 219
L S K G + VV ++++ +Y+ CGD+ S R+IFD + +D W+++I G
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLK 277
Query: 220 NNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFV 279
N++ E+ + FF++M V P Q S L C ++ + G +H ++I + D +
Sbjct: 278 NDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPL 337
Query: 280 ASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTT 339
+ LL +Y + G +R+A +F RI + ++V+WNS+I ++ G G ++M + + L R +
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGE-QAMLMYRRLLRMS 396
Query: 340 SLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDA 399
+ + T A + + G+ +H V K VG L+ MY + + A
Sbjct: 397 TPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESA 456
Query: 400 FKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQL 459
K F + +D W+ +I + + G A++ EM E +SL I +CS +
Sbjct: 457 QKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDM 516
Query: 460 LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMI 519
+ G+ FH AI++G++ + V +++DMY K G E ++ +F P+ +N+M+
Sbjct: 517 AMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSML 576
Query: 520 CGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKI 579
Y+ HG ++A+ F + +NG P+ VT+L++L+ACSH G L+ M + I
Sbjct: 577 GAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGI 635
Query: 580 KPESEHYSCLVDAYGRAGRLEEAYQIVQKD--GSESA--WRTLLSACRNHNNTKIGEKSA 635
K +HYSC+V+ +AG ++EA +++++ G+ A WRTLLSAC N N +IG +A
Sbjct: 636 KAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAA 695
Query: 636 KKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+++++L+P D A++ILLSN+Y G+WE+ + R K+ KDPG SW+
Sbjct: 696 EQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWI 746
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 206/411 (50%), Gaps = 34/411 (8%)
Query: 173 ETDAVV-----SSAMVDLYAKCGDVSSCRKIFDSMEEKD-------NFVWSSIISGYTVN 220
ETDA ++ ++ +Y +C + RK+FD M +++ + V+ + G +++
Sbjct: 14 ETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLH 73
Query: 221 NR----GEEAVHFFKDMCKQRVKPDQHVLSSTL---RACVEIEDLNTGVQVHGQMIKNG- 272
++ G + FF P + SS + R CV I L Q+H ++ G
Sbjct: 74 SQIIKLGSFQMIFF--------MPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGA 125
Query: 273 --HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQ 330
+ + L+++Y G L A K+F ++ +++V++N++ A+++ +S +
Sbjct: 126 GAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFP 185
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMY 390
L + ++ +T ++++ C D+ G ++S ++K S +V +++ MY
Sbjct: 186 LTTHMA-FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMY 244
Query: 391 SECGQIGDAFKAFVDIVCKDDSSWSS-IIGTYKQNGMESEALELCKEMLAEGITFTSYSL 449
S CG + A + F + +D +W++ I+G+ K + +E + L + ML G+ T ++
Sbjct: 245 SSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE-DGLMFFRNMLMSGVDPTQFTY 303
Query: 450 PLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK 509
+ ++ CS+L + ++GK H I S D+ + ++++DMY CG M ++ VF
Sbjct: 304 SIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHN 363
Query: 510 PNEVIYNAMICGYAHHGQAKQAIEIF-TMLEKNGVTPNQVTFLAMLSACSH 559
PN V +N++I G + +G +QA+ ++ +L + P++ TF A +SA +
Sbjct: 364 PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 339 bits (870), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 191/620 (30%), Positives = 331/620 (53%), Gaps = 78/620 (12%)
Query: 143 DNRTFVSLLKCC--STLGE--VMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKI 198
D+ F LL C S L V +H K G + + + ++D Y+KCG + R++
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 199 FD-------------------------------SMEEKDNFVWSSIISGYTVNNRGEEAV 227
FD SM E+D W+S++SG+ ++R EEA+
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 228 HFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLY 287
+F M K+ +++ +S L AC + D+N GVQVH + K+ +D ++ S L+ +Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 288 ANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGAT 347
+ G + DA+++F + D+++V+WNS+I Q G + ++ + Q + + ++ T
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP-AVEALDVFQ-MMLESRVEPDEVT 255
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSS-VSHPTLVGNALVHMYSECGQIGDA---FKA- 402
L +++ +C + S + G+++H V+K+ + + ++ NA V MY++C +I +A F +
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 403 ---------------------------FVDIVCKDDSSWSSIIGTYKQNGMESEALELCK 435
F + ++ SW+++I Y QNG EAL L
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 436 EMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHV------FAIKSGYNHDVYVGSSIID 489
+ E + T YS + +C+ L +++G Q HV F +SG D++VG+S+ID
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 490 MYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVT 549
MY KCG +E+ VF ++ + V +NAMI G+A +G +A+E+F + ++G P+ +T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 550 FLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK- 608
+ +LSAC HAG++E+ + F+ M + + P +HY+C+VD GRAG LEEA ++++
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 609 --DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEAR 666
W +LL+AC+ H N +G+ A+K++E+ PS+ Y+LLSN+Y E GKWE+
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 667 DCREKMAKTGVKKDPGSSWL 686
+ R+ M K GV K PG SW+
Sbjct: 616 NVRKSMRKEGVTKQPGCSWI 635
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 150/607 (24%), Positives = 286/607 (47%), Gaps = 92/607 (15%)
Query: 44 FSVLLRACATPALWNVGLQ-IHGVLVRSGLERDKFAGSSLVYMYSNNGS----------- 91
F+ LL +C L + ++ +H +++SG + F + L+ YS GS
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 92 -------------------NLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFS 132
L +A +F + ERD WN M+SGFAQ D C +
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQ-HDRCEEALCYF 140
Query: 133 EMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKC 189
M EG + +F S+L CS L ++ +Q+H L +K +D + SA+VD+Y+KC
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 190 GDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTL 249
G+V+ +++FD M +++ W+S+I+ + N EA+ F+ M + RV+PD+ L+S +
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 250 RACVEIEDLNTGVQVHGQMIKNGH-QNDCFVASVLLTLYANFGGLRD------------- 295
AC + + G +VHG+++KN +ND +++ + +YA +++
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 296 ------------------AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHR 337
A +F ++ ++++V+WN++I + Q G+ + ++ L L R
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE-NEEALSLFCLLKR 379
Query: 338 TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK------SSVSHPTLVGNALVHMYS 391
+ + ILK+C + ++L G Q H V+K S VGN+L+ MY
Sbjct: 380 ESVCPTH-YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 392 ECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL 451
+CG + + + F ++ +D SW+++I + QNG +EALEL +EML G ++
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 452 CISSCSQLLAINVGKQFHV-----FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA 506
+S+C + G+ + F + +H + ++D+ + G +E++K + +
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH----YTCMVDLLGRAGFLEEAKSMIEE 554
Query: 507 Q-VKPNEVIYNAMICGYAHHGQ---AKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGY 562
++P+ VI+ +++ H K E +E + P ++ + + + G
Sbjct: 555 MPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP----YVLLSNMYAELGK 610
Query: 563 IEDTLNL 569
ED +N+
Sbjct: 611 WEDVMNV 617
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 210/410 (51%), Gaps = 45/410 (10%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+ TW +++S + +A F M NEY+F+ +L AC+ N G
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 171
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+Q+H ++ +S D + GS+LV MYS G N+ DA VF ++ +R++V+WN +I+ F Q
Sbjct: 172 VQVHSLIAKSPFLSDVYIGSALVDMYSKCG-NVNDAQRVFDEMGDRNVVSWNSLITCFEQ 230
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGA-ETDA 176
G +F M E ++PD T S++ C++L + ++HG K D
Sbjct: 231 NGPAVEALDVFQMMLESR-VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-------------------------------EK 205
++S+A VD+YAKC + R IFDSM E+
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
+ W+++I+GYT N EEA+ F + ++ V P + ++ L+AC ++ +L+ G+Q H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 266 GQMIK------NGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHA 319
++K +G ++D FV + L+ +Y G + + +FR++ ++D V+WN+MI+ A
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHS 369
Q G G + +++L +E+ + + T+I +L +C + + GR S
Sbjct: 470 QNGYG-NEALELFREMLESGE-KPDHITMIGVLSACGHAGFVEEGRHYFS 517
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 175/387 (45%), Gaps = 64/387 (16%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M RNVV+W +LI+ + G +A +F M P+E T + ++ ACA+ + VG
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG 272
Query: 61 LQIHGVLVRSG-LERDKFAGSSLVYMYSN------------------------------N 89
++HG +V++ L D ++ V MY+
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 332
Query: 90 GSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD-------FCMVQRLFSEMWEVEGLKP 142
++ + A +F + ER++V+WN +I+G+ Q G+ FC+++R E + P
Sbjct: 333 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR--------ESVCP 384
Query: 143 DNRTFVSLLKCCSTLGEV---MQI------HGLASKFGAETDAVVSSAMVDLYAKCGDVS 193
+ +F ++LK C+ L E+ MQ HG + G E D V ++++D+Y KCG V
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 194 SCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACV 253
+F M E+D W+++I G+ N G EA+ F++M + KPD + L AC
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 254 EIEDLNTGVQVHGQMIKN---GHQNDCFVASVLLTLYANFGGLRDAEKLFRRID-DKDIV 309
+ G M ++ D + + ++ L G L +A+ + + D V
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHY--TCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 562
Query: 310 AWNSMILA---HAQLGQGSSRSMQLLQ 333
W S++ A H + G + +LL+
Sbjct: 563 IWGSLLAACKVHRNITLGKYVAEKLLE 589
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 338 bits (868), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 196/634 (30%), Positives = 341/634 (53%), Gaps = 17/634 (2%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
Q H ++ G D + L S+ G+ + A +F + D+ +NV++ GF+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGA-IYYARDIFLSVQRPDVFLFNVLMRGFSVN 96
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL-----GEVMQIHGLASKFGAETDA 176
+F+ + + LKP++ T+ + S G V IHG A G +++
Sbjct: 97 ESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRV--IHGQAVVDGCDSEL 154
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
++ S +V +Y K V RK+FD M EKD +W+++ISGY N E++ F+D+ +
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 237 R-VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+ D L L A E+++L G+Q+H K G + +V + ++LY+ G ++
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
LFR DIVA+N+MI + G+ + S+ L +EL + + +++ +TL++++
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGE-TELSLSLFKELMLSGA-RLRSSTLVSLVPVS 332
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+ + A IH +KS+ V AL +YS+ +I A K F + K SW+
Sbjct: 333 GHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS 475
++I Y QNG+ +A+ L +EM + ++ +S+C+QL A+++GK H +
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF 535
+ +YV +++I MYAKCG + +++++FD K NEV +N MI GY HGQ ++A+ IF
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509
Query: 536 TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGR 595
+ +G+TP VTFL +L ACSHAG +++ +F M+++Y +P +HY+C+VD GR
Sbjct: 510 YEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGR 569
Query: 596 AGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILL 652
AG L+ A Q ++ + S W TLL ACR H +T + ++K+ EL+P + ++LL
Sbjct: 570 AGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLL 629
Query: 653 SNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
SNI+ + + +A R+ K + K PG + +
Sbjct: 630 SNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 251/526 (47%), Gaps = 15/526 (2%)
Query: 36 DERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRD 95
D +PN T++ + A + G IHG V G + + GS++V MY + D
Sbjct: 114 DLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFW-RVED 172
Query: 96 ACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS 155
A VF + E+D + WN MISG+ + + ++F ++ + D T + +L +
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 156 TLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSS 212
L E+ MQIH LA+K G + V + + LY+KCG + +F + D +++
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 213 IISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIE-DLNTGVQVHGQMIKN 271
+I GYT N E ++ FK++ + + SSTL + V + L +HG +K+
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGAR----LRSSTLVSLVPVSGHLMLIYAIHGYCLKS 348
Query: 272 GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQL 331
+ V++ L T+Y+ + A KLF +K + +WN+MI + Q G + ++ L
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL-TEDAISL 407
Query: 332 LQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYS 391
+E+ + + T+ IL +C L G+ +H LV + V AL+ MY+
Sbjct: 408 FREMQK-SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 392 ECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL 451
+CG I +A + F + K++ +W+++I Y +G EAL + EML GIT T +
Sbjct: 467 KCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC 526
Query: 452 CISSCSQLLAINVGKQ-FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVK 509
+ +CS + G + F+ + G+ V + ++D+ + GH++ + + +A ++
Sbjct: 527 VLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE 586
Query: 510 PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLS 555
P ++ ++ H A + L + + P+ V + +LS
Sbjct: 587 PGSSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLS 630
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 213/425 (50%), Gaps = 13/425 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE---RPNEYTFSVLLRACATPALW 57
MP ++ + W T+IS + + ++ Q+F D+ ++E R + T +L A A
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDL--INESCTRLDTTTLLDILPAVAELQEL 237
Query: 58 NVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISG 117
+G+QIH + ++G + + + +YS G ++ +F + + D+VA+N MI G
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG-KIKMGSALFREFRKPDIVAYNAMIHG 296
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAV 177
+ G+ + LF E+ + G + + T VSL+ L + IHG K + A
Sbjct: 297 YTSNGETELSLSLFKELM-LSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHAS 355
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
VS+A+ +Y+K ++ S RK+FD EK W+++ISGYT N E+A+ F++M K
Sbjct: 356 VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
P+ ++ L AC ++ L+ G VH + ++ +V++ L+ +YA G + +A
Sbjct: 416 FSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEAR 475
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
+LF + K+ V WN+MI + GQG ++ + E+ + + T + +L +C +
Sbjct: 476 RLFDLMTKKNEVTWNTMISGYGLHGQG-QEALNIFYEM-LNSGITPTPVTFLCVLYACSH 533
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAFVDIVCKDDSS--W 414
+ G +I + ++ P++ A +V + G + A + F++ + + S W
Sbjct: 534 AGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ-FIEAMSIEPGSSVW 592
Query: 415 SSIIG 419
+++G
Sbjct: 593 ETLLG 597
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 338 bits (867), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 206/708 (29%), Positives = 371/708 (52%), Gaps = 31/708 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPN--EYTFSVLLRACATPALWN 58
+P V W T+I + +A ++ M+ N YT+S L+ACA
Sbjct: 65 IPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLK 124
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACC--------VFHDLLERDLVA 110
G +H L+R + +SL+ MY S L C VF ++ +++VA
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMYV---SCLNAPDCFEYDVVRKVFDNMRRKNVVA 181
Query: 111 WNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLA 167
WN +IS + + G R F M +E +KP +FV++ S ++ + +GL
Sbjct: 182 WNTLISWYVKTGRNAEACRQFGIMMRME-VKPSPVSFVNVFPAVSISRSIKKANVFYGLM 240
Query: 168 SKFGAE--TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEE 225
K G E D V S+ + +YA+ GD+ S R++FDS E++ VW+++I Y N+ E
Sbjct: 241 LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 300
Query: 226 AVHFFKD-MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL 284
++ F + + + + D+ A ++ + G Q HG + KN + + + L+
Sbjct: 301 SIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLM 360
Query: 285 TLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQ 344
+Y+ G + + +F + ++D+V+WN+MI A Q G + L+ E+ + +I
Sbjct: 361 VMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGL-DDEGLMLVYEMQKQ-GFKID 418
Query: 345 GATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF- 403
T+ A+L + N + G+Q H+ +++ + + + L+ MYS+ G I + K F
Sbjct: 419 YITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIRISQKLFE 477
Query: 404 -VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAI 462
+D ++W+S+I Y QNG + + ++ML + I + ++ + +CSQ+ ++
Sbjct: 478 GSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSV 537
Query: 463 NVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGY 522
++GKQ H F+I+ + +V+V S+++DMY+K G ++ ++ +F + N V Y MI GY
Sbjct: 538 DLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGY 597
Query: 523 AHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPE 582
HG ++AI +F ++++G+ P+ +TF+A+LSACS++G I++ L +F M Y I+P
Sbjct: 598 GQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPS 657
Query: 583 SEHYSCLVDAYGRAGRLEEAYQIVQKDGSE----SAWRTLLSACRNHNNTKIGEKSAKKM 638
SEHY C+ D GR GR+ EAY+ V+ G E W +LL +C+ H ++ E ++++
Sbjct: 658 SEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERL 717
Query: 639 IELNPSDHAS--YILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+ + + S +LLSN+Y EE KW+ R M + G+KK+ G S
Sbjct: 718 AKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRS 765
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 229/480 (47%), Gaps = 33/480 (6%)
Query: 190 GDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP----DQHVL 245
G+ R++FD++ + +W++II G+ NN EA+ F+ M ++ P D +
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKTAPFTNCDAYTY 110
Query: 246 SSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD------AEKL 299
SSTL+AC E ++L G VH +I+ + V + L+ +Y + D K+
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 300 FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKS 359
F + K++VAWN++I + + G+ + Q + ++ + + + +
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQF--GIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 360 DLPAGRQIHSLVMK--SSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
+ + L++K V ++ + MY+E G I + + F V ++ W+++
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 418 IGTYKQNGMESEALEL------CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
IG Y QN E++EL KE++++ +T+ L S+ S L + +G+QFH F
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYL-----LAASAVSALQQVELGRQFHGF 343
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
K+ + + +S++ MY++CG + S VF + + + V +N MI + +G +
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
+ + ++K G + +T A+LSA S+ E ++ + I+ E + S L+D
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLI-RQGIQFEGMN-SYLID 461
Query: 592 AYGRAGRLEEAYQIVQKDG----SESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHA 647
Y ++G + + ++ + G ++ W +++S + +T+ +KM+E N +A
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 205/684 (29%), Positives = 353/684 (51%), Gaps = 21/684 (3%)
Query: 3 HRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQ 62
+R++ + +L+ S + +F D+ PN +T S+ L+A T + + LQ
Sbjct: 10 YRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQA-TTTSFNSFKLQ 68
Query: 63 IHGV---LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
+ V L +SGL+R + +SL+ +Y G + A +F ++ ERD V WN +I G++
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGC-VTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDA 176
+ G C +LF M + +G P T V+LL C G V Q +HG+A+K G E D+
Sbjct: 128 RNGYECDAWKLFIVMLQ-QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V +A++ Y+KC ++ S +F M++K W+++I Y+ + EEA+ FK+M ++
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
V+ + + L A V E L H ++K G ND V + L+ Y+ G L A
Sbjct: 247 NVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSA 300
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
E+L+ IV S++ +A+ G + + R ++I L+ IL CK
Sbjct: 301 ERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT--RQLCMKIDAVALVGILHGCK 358
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS 416
S + G +H +KS + TLV N L+ MYS+ + F + SW+S
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNS 418
Query: 417 IIGTYKQNGMESEALELCKEM-LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS 475
+I Q+G S A E+ +M L G+ + ++ ++ CSQL +N+GK+ H + +++
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRN 478
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF 535
+ ++ +V +++IDMYAKCG+ ++ VF + P +N+MI GY+ G +A+ +
Sbjct: 479 NFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCY 538
Query: 536 TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGR 595
+ + G+ P+++TFL +LSAC+H G++++ F M+ ++ I P +HY+ +V GR
Sbjct: 539 LEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGR 598
Query: 596 AGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILL 652
A EA ++ K + W LLSAC H ++GE A+KM L+ + Y+L+
Sbjct: 599 ACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLM 658
Query: 653 SNIYIEEGKWEEARDCREKMAKTG 676
SN+Y E W++ R M G
Sbjct: 659 SNLYATEAMWDDVVRVRNMMKDNG 682
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/548 (24%), Positives = 256/548 (46%), Gaps = 12/548 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+ V W LI + R G A++LF M P+ T LL C + G
Sbjct: 111 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+HGV +SGLE D ++L+ YS + L A +F ++ ++ V+WN MI ++Q
Sbjct: 171 RSVHGVAAKSGLELDSQVKNALISFYSKC-AELGSAEVLFREMKDKSTVSWNTMIGAYSQ 229
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G +F M+E + ++ T ++LL S +H L K G D V +
Sbjct: 230 SGLQEEAITVFKNMFE-KNVEISPVTIINLL---SAHVSHEPLHCLVVKCGMVNDISVVT 285
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
++V Y++CG + S +++ S ++ +SI+S Y + AV +F + +K
Sbjct: 286 SLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKI 345
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
D L L C + ++ G+ +HG IK+G V + L+T+Y+ F + LF
Sbjct: 346 DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLF 405
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
++ + +++WNS+I Q G+ S+ + ++ ++ T L T+ ++L C
Sbjct: 406 EQLQETPLISWNSVISGCVQSGRAST-AFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
L G+++H ++++ + V AL+ MY++CG A F I ++W+S+I
Sbjct: 465 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 524
Query: 421 YKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSGYNH 479
Y +G++ AL EM +G+ + +S+C+ ++ GK F + G +
Sbjct: 525 YSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISP 584
Query: 480 DVYVGSSIIDMYAK-CGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAK----QAIEI 534
+ + ++ + + C E ++ +KP+ ++ A++ H + + A ++
Sbjct: 585 TLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKM 644
Query: 535 FTMLEKNG 542
F + KNG
Sbjct: 645 FMLDYKNG 652
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 335 bits (860), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 198/652 (30%), Positives = 348/652 (53%), Gaps = 12/652 (1%)
Query: 43 TFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHD 102
T+ L+ AC++ G +IH ++ S + D + ++ MY GS LRDA VF
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGS-LRDAREVFDF 127
Query: 103 LLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV-- 160
+ ER+LV++ +I+G++Q G RL+ +M + E L PD F S++K C++ +V
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ-EDLVPDQFAFGSIIKACASSSDVGL 186
Query: 161 -MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTV 219
Q+H K + + + +A++ +Y + +S ++F + KD WSSII+G++
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 220 NNRGEEAVHFFKDMCKQRV-KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCF 278
EA+ K+M V P++++ S+L+AC + + G Q+HG IK+ +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 279 VASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT 338
L +YA G L A ++F +I+ D +WN +I A G + ++ + ++ R+
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGY-ADEAVSVFSQM-RS 364
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
+ +L ++L + L G QIHS ++K V N+L+ MY+ C +
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYC 424
Query: 399 AFKAFVDIVCKDDS-SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCS 457
F F D DS SW++I+ Q+ E L L K ML ++ + C
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCV 484
Query: 458 QLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNA 517
++ ++ +G Q H +++K+G + ++ + +IDMYAKCG + ++++FD+ + V ++
Sbjct: 485 EISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWST 544
Query: 518 MICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKY 577
+I GYA G ++A+ +F ++ G+ PN VTF+ +L+ACSH G +E+ L L+ M ++
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEH 604
Query: 578 KIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKS 634
I P EH SC+VD RAGRL EA + + + E W+TLLSAC+ N + +K+
Sbjct: 605 GISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKA 664
Query: 635 AKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
A+ +++++P + +++LL +++ G WE A R M K VKK PG SW+
Sbjct: 665 AENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWI 716
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 276/538 (51%), Gaps = 11/538 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RN+V++T++I+ + + G +A +L+ M D P+++ F +++ACA+ + +G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+H +++ A ++L+ MY + + DA VF+ + +DL++W+ +I+GF+Q
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYV-RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 121 VG-DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDA 176
+G +F + L EM P+ F S LK CS+L QIHGL K +A
Sbjct: 247 LGFEFEALSHL-KEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ ++ D+YA+CG ++S R++FD +E D W+ II+G N +EAV F M
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
PD L S L A + L+ G+Q+H +IK G D V + LLT+Y L
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 297 EKLFRRI-DDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
LF ++ D V+WN+++ A Q Q M L +L + + T+ +L+ C
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQHEQ--PVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
S L G Q+H +K+ ++ + N L+ MY++CG +G A + F + +D SWS
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWS 543
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQFHVFAIK 474
++I Y Q+G EAL L KEM + GI + +++CS + + G K + +
Sbjct: 544 TLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE 603
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVKPNEVIYNAMICGYAHHGQAKQA 531
G + S ++D+ A+ G + ++++ D +++P+ V++ ++ G A
Sbjct: 604 HGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLA 661
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 145/293 (49%), Gaps = 4/293 (1%)
Query: 336 HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQ 395
+ +S +I+ T I+++ +C + L GR+IH ++ S+ + T++ N ++ MY +CG
Sbjct: 58 QKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGS 117
Query: 396 IGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS 455
+ DA + F + ++ S++S+I Y QNG +EA+ L +ML E + ++ I +
Sbjct: 118 LRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKA 177
Query: 456 CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIY 515
C+ + +GKQ H IK + + +++I MY + M D+ +VF + + +
Sbjct: 178 CASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISW 237
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVT-PNQVTFLAMLSACSHAGYIEDTLNLFTLML 574
+++I G++ G +A+ + GV PN+ F + L ACS + + L +
Sbjct: 238 SSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCI 297
Query: 575 YKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK--DGSESAWRTLLSACRNH 625
K ++ + L D Y R G L A ++ + ++W +++ N+
Sbjct: 298 -KSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANN 349
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 335 bits (859), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 203/694 (29%), Positives = 365/694 (52%), Gaps = 50/694 (7%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
RNV +W +I R G A F +M + P+ + + +AC G +
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV 195
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
HG +V+SGLE F SSL MY G L DA VF ++ +R+ VAWN ++ G+ Q G
Sbjct: 196 HGYVVKSGLEDCVFVASSLADMYGKCGV-LDDASKVFDEIPDRNAVAWNALMVGYVQNGK 254
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSS 180
RLFS+M + +G++P T + L + +G V Q H +A G E D ++ +
Sbjct: 255 NEEAIRLFSDMRK-QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
++++ Y K G + +FD M EKD W+ IISGY E+A++ + M +++K
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
D L++ + A E+L G +V I++ ++D +AS ++ +YA G + DA+K+F
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
+KD++ WN+++ A+A+ G S +++L +Q++G
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGL-SGEALRLFY------GMQLEG--------------- 471
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI----VCKDDSSWSS 416
+P +L++ S + + GQ+ +A F+ + + + SW++
Sbjct: 472 VPPNVITWNLIILSLLRN---------------GQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS- 475
++ QNG EA+ ++M G+ ++S+ + +S+C+ L ++++G+ H + I++
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF 535
++ V + +S++DMYAKCG + ++KVF +++ + NAMI YA +G K+AI ++
Sbjct: 577 QHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALY 636
Query: 536 TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGR 595
LE G+ P+ +T +LSAC+HAG I + +FT ++ K +KP EHY +VD
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLAS 696
Query: 596 AGRLEEAYQIVQKDGSESAWR---TLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILL 652
AG E+A +++++ + R +L+++C T++ + ++K++E P + +Y+ +
Sbjct: 697 AGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTI 756
Query: 653 SNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
SN Y EG W+E RE M G+KK PG SW+
Sbjct: 757 SNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 790
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 267/529 (50%), Gaps = 17/529 (3%)
Query: 115 ISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFG 171
+S + G+ L +EM + L+ + +L+ C L QIH K G
Sbjct: 42 VSSLCKNGEIKEALSLVTEM-DFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG 100
Query: 172 --AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHF 229
+ + + +V YAKC + +F + ++ F W++II E A+
Sbjct: 101 DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMG 160
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
F +M + + PD V+ + +AC ++ G VHG ++K+G ++ FVAS L +Y
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 290 FGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLI 349
G L DA K+F I D++ VAWN++++ + Q G+ + +++L ++ R ++ T+
Sbjct: 221 CGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGK-NEEAIRLFSDM-RKQGVEPTRVTVS 278
Query: 350 AILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK 409
L + N + G+Q H++ + + + ++G +L++ Y + G I A F + K
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 410 DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFH 469
D +W+ II Y Q G+ +A+ +C+ M E + + +L +S+ ++ + +GK+
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 470 VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAK 529
+ I+ + D+ + S+++DMYAKCG + D+KKVFD+ V+ + +++N ++ YA G +
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 530 QAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCL 589
+A+ +F ++ GV PN +T+ ++ + G +++ ++F L + I P ++ +
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWTTM 517
Query: 590 VDAYGRAGRLEEAYQIVQKDGSESAWR-------TLLSACRNHNNTKIG 631
++ + G EEA ++K ES R LSAC + + IG
Sbjct: 518 MNGMVQNGCSEEAILFLRK-MQESGLRPNAFSITVALSACAHLASLHIG 565
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 223/480 (46%), Gaps = 65/480 (13%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P RN V W L+ +++ G +A +LF+DMR P T S L A A G
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q H + + +G+E D G+SL+ Y G + A VF + E+D+V WN++ISG+ Q
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGL-IEYAEMVFDRMFEKDVVTWNLIISGYVQ 352
Query: 121 VG------DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS-----TLGEVMQIHGLASK 169
G C + RL E LK D T +L+ + LG+ +Q + +
Sbjct: 353 QGLVEDAIYMCQLMRL-------EKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 170 FGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHF 229
F E+D V++S ++D+YAKCG + +K+FDS EKD +W+++++ Y + EA+
Sbjct: 406 F--ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRL 463
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
F M + V P+ V++ L ++L+L N
Sbjct: 464 FYGMQLEGVPPN--VITWNL--------------------------------IILSLLRN 489
Query: 290 FGGLRDAEKLFRRIDDKDI----VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG 345
G + +A+ +F ++ I ++W +M+ Q G S L + + L+
Sbjct: 490 -GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQ--NGCSEEAILFLRKMQESGLRPNA 546
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG--NALVHMYSECGQIGDAFKAF 403
++ L +C + + L GR IH +++ ++ H +LV +LV MY++CG I A K F
Sbjct: 547 FSITVALSACAHLASLHIGRTIHGYIIR-NLQHSSLVSIETSLVDMYAKCGDINKAEKVF 605
Query: 404 VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
+ + +++I Y G EA+ L + + G+ + ++ +S+C+ IN
Sbjct: 606 GSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDIN 665
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 200/653 (30%), Positives = 342/653 (52%), Gaps = 14/653 (2%)
Query: 40 NEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCV 99
+ + + +LR C IH +++ G D FA + L+ Y G + +DA +
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD-KDALNL 106
Query: 100 FHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGE 159
F ++ ER+ V++ + G+A + RL E E L P F S LK +L +
Sbjct: 107 FDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHE---LNP--HVFTSFLKLFVSLDK 161
Query: 160 V---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISG 216
+H K G +++A V +A+++ Y+ CG V S R +F+ + KD VW+ I+S
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 217 YTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQND 276
Y N E+++ M P+ + + L+A + + + VHGQ++K + D
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD 281
Query: 277 CFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELH 336
V LL LY G + DA K+F + D+V W+ MI Q G + ++ L +
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF-CNEAVDLFIRM- 339
Query: 337 RTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQI 396
R + TL +IL C G Q+H LV+K V NAL+ +Y++C ++
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 397 GDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSC 456
A K F ++ K++ SW+++I Y+ G +A + +E L ++ T + + +C
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 457 SQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYN 516
+ L ++++G Q H AIK+ V V +S+IDMYAKCG ++ ++ VF+ + +N
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
A+I GY+ HG +QA+ I +++ PN +TFL +LS CS+AG I+ F M+
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESA---WRTLLSACRNHNNTKIGEK 633
+ I+P EHY+C+V GR+G+L++A ++++ E + WR +LSA N NN + +
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
Query: 634 SAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
SA++++++NP D A+Y+L+SN+Y +W R+ M + GVKK+PG SW+
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWI 692
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 205/405 (50%), Gaps = 14/405 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
+++V W ++S ++ G + +L + MR+ PN YTF L+A ++ +
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV 269
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
HG ++++ D G L+ +Y+ G ++ DA VF+++ + D+V W+ MI+ F Q G
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLG-DMSDAFKVFNEMPKNDVVPWSFMIARFCQNG- 327
Query: 124 FC-MVQRLFSEMWEVEGLKPDNRTFVSLLK-C----CSTLGEVMQIHGLASKFGAETDAV 177
FC LF M E + P+ T S+L C CS LGE Q+HGL K G + D
Sbjct: 328 FCNEAVDLFIRMREAF-VVPNEFTLSSILNGCAIGKCSGLGE--QLHGLVVKVGFDLDIY 384
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
VS+A++D+YAKC + + K+F + K+ W+++I GY G +A F++ + +
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
V + SS L AC + ++ GVQVHG IK + V++ L+ +YA G ++ A+
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
+F ++ D+ +WN++I ++ G G R + ++ + + G T + +L C N
Sbjct: 505 SVFNEMETIDVASWNALISGYSTHGLG--RQALRILDIMKDRDCKPNGLTFLGVLSGCSN 562
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFK 401
+ G++ +++ P L +V + GQ+ A K
Sbjct: 563 AGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMK 607
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 160/322 (49%), Gaps = 7/322 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP +VV W+ +I+ + G +A LF MR PNE+T S +L CA +G
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+HG++V+ G + D + ++L+ +Y+ + A +F +L ++ V+WN +I G+
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYA-KCEKMDTAVKLFAELSSKNEVSWNTVIVGYEN 426
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
+G+ +F E + + TF S L C++L + +Q+HGLA K
Sbjct: 427 LGEGGKAFSMFREALRNQ-VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
VS++++D+YAKCGD+ + +F+ ME D W+++ISGY+ + G +A+ M +
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFV-ASVLLTLYANFGGLRDA 296
KP+ L C ++ G + MI++ C + ++ L G L A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKA 605
Query: 297 EKLFRRID-DKDIVAWNSMILA 317
KL I + ++ W +M+ A
Sbjct: 606 MKLIEGIPYEPSVMIWRAMLSA 627
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 322/557 (57%), Gaps = 15/557 (2%)
Query: 142 PDNR-TFVSLLKCCSTLG---EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRK 197
P+ R VS+L+ C+ G + Q+H K G+ + + S+ ++D+Y KC + K
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 198 IFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIED 257
+FDSM E++ WS+++SG+ +N + ++ F +M +Q + P++ S+ L+AC +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 258 LNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI-- 315
L G+Q+HG +K G + V + L+ +Y+ G + +AEK+FRRI D+ +++WN+MI
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 316 LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS 375
HA G + + ++QE + + TL ++LK+C + + AG+QIH +++S
Sbjct: 183 FVHAGYGSKALDTFGMMQEAN--IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 376 VSHPT--LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALEL 433
P+ + +LV +Y +CG + A KAF I K SWSS+I Y Q G EA+ L
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
K + S++L I + + GKQ A+K + V +S++DMY K
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 360
Query: 494 CGHMEDSKKVFDAQVKPNEVI-YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLA 552
CG +++++K F A+++ +VI + +I GY HG K+++ IF + ++ + P++V +LA
Sbjct: 361 CGLVDEAEKCF-AEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 553 MLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---D 609
+LSACSH+G I++ LF+ +L + IKP EHY+C+VD GRAGRL+EA ++
Sbjct: 420 VLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK 479
Query: 610 GSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCR 669
+ W+TLLS CR H + ++G++ K ++ ++ + A+Y+++SN+Y + G W E + R
Sbjct: 480 PNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAR 539
Query: 670 EKMAKTGVKKDPGSSWL 686
E G+KK+ G SW+
Sbjct: 540 ELGNIKGLKKEAGMSWV 556
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 155/540 (28%), Positives = 270/540 (50%), Gaps = 15/540 (2%)
Query: 39 PNEYTFSV-LLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDAC 97
PN+ V +LR C L + G Q+H L++SG + + L+ MY L A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLM-AY 61
Query: 98 CVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL 157
VF + ER++V+W+ ++SG GD LFSEM +G+ P+ TF + LK C L
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR-QGIYPNEFTFSTNLKACGLL 120
Query: 158 GEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSII 214
+ +QIHG K G E V +++VD+Y+KCG ++ K+F + ++ W+++I
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 215 SGYTVNNRGEEAVHFFKDMCKQRVK--PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG 272
+G+ G +A+ F M + +K PD+ L+S L+AC + G Q+HG ++++G
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 273 HQ--NDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQ 330
+ + L+ LY G L A K F +I +K +++W+S+IL +AQ G+ +M
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE-FVEAMG 299
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMY 390
L + L S QI L +I+ + + L G+Q+ +L +K T V N++V MY
Sbjct: 300 LFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 391 SECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLP 450
+CG + +A K F ++ KD SW+ +I Y ++G+ +++ + EML I
Sbjct: 359 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 451 LCISSCSQLLAINVGKQ-FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-V 508
+S+CS I G++ F G V + ++D+ + G ++++K + D +
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 509 KPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLN 568
KPN I+ ++ HG + E+ +L + N ++ M + AGY + N
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID-AKNPANYVMMSNLYGQAGYWNEQGN 537
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 228/446 (51%), Gaps = 17/446 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNVV+W+ L+S H+ G + + LF++M PNE+TFS L+AC G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
LQIHG ++ G E G+SLV MYS G + +A VF +++R L++WN MI+GF
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCG-RINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 121 VGDFCMVQRLFSEMWEVE-GLKPDNRTFVSLLKCCSTLGEVM---QIHG--LASKFGAET 174
G F M E +PD T SLLK CS+ G + QIHG + S F +
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
A ++ ++VDLY KCG + S RK FD ++EK WSS+I GY EA+ FK +
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ + D LSS + + L G Q+ +K + V + ++ +Y G +
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
+AEK F + KD+++W +I + + G G +S+++ E+ R +++ +A+L +
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLG-KKSVRIFYEMLR-HNIEPDEVCYLAVLSA 423
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAFVDI--VCKDD 411
C + + G ++ S ++++ P + A +V + G++ +A K +D + +
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA-KHLIDTMPIKPNV 482
Query: 412 SSWSSIIGTYKQNGMESEALELCKEM 437
W +++ + +G +EL KE+
Sbjct: 483 GIWQTLLSLCRVHG----DIELGKEV 504
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 332 bits (851), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 202/737 (27%), Positives = 373/737 (50%), Gaps = 59/737 (8%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
M + V W +++ L + + F M DE +P+ TF+++L C
Sbjct: 82 MDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYN 140
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G +H ++++GLE+D G++LV MY+ G DA F + ++D+V+WN +I+GF+
Sbjct: 141 GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFS 200
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM------QIHG-LASKFGA 172
+ R F M + E +P+ T ++L C+++ + + QIH + +
Sbjct: 201 ENNMMADAFRSFCLMLK-EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKD 232
+T V +++V Y + G + +F M KD W+ +I+GY N +A F +
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 233 MC-KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ-NDCFVASVLLTLYANF 290
+ K V PD + S L C ++ DL +G ++H ++++ + D V + L++ YA F
Sbjct: 320 LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARF 379
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTT--SLQIQGATL 348
G A F + KDI++WN+++ A A S + Q L LH ++ + T+
Sbjct: 380 GDTSAAYWAFSLMSTKDIISWNAILDAFAD----SPKQFQFLNLLHHLLNEAITLDSVTI 435
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSH----PTLVGNALVHMYSECGQI-------- 396
+++LK C N + +++H +K+ + H P L GNAL+ Y++CG +
Sbjct: 436 LSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKL-GNALLDAYAKCGNVEYAHKIFL 494
Query: 397 ------------------------GDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALE 432
DA F ++ D ++WS ++ Y ++ +EA+
Sbjct: 495 GLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIG 554
Query: 433 LCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYA 492
+ +E+ A G+ + ++ + C+QL ++++ +Q H + I+ G D+ + +++D+YA
Sbjct: 555 VFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYA 613
Query: 493 KCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLA 552
KCG ++ + VF + + + V++ AM+ GYA HG+ K+A+ I++ + ++ + P+ V
Sbjct: 614 KCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITT 673
Query: 553 MLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---D 609
ML+AC HAG I+D L ++ + + +KP E Y+C VD R GRL++AY V + +
Sbjct: 674 MLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVE 733
Query: 610 GSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCR 669
+ + W TLL AC +N +G A +++ D +++L+SN+Y + KWE + R
Sbjct: 734 PNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELR 793
Query: 670 EKMAKTGVKKDPGSSWL 686
M K +KK G SWL
Sbjct: 794 NLMKKKEMKKPAGCSWL 810
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/633 (25%), Positives = 296/633 (46%), Gaps = 58/633 (9%)
Query: 27 QLFNDMRVMDERPNEY-TFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYM 85
Q + R++ ++ F +++ACA+ + G +HG + + G S++ M
Sbjct: 6 QFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNM 65
Query: 86 YSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA-QVGDFCMVQRLFSEMWEVEGLKPDN 144
Y+ + D +F + D V WN++++G + G M R F M + KP +
Sbjct: 66 YAK-CRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETM--RFFKAMHFADEPKPSS 122
Query: 145 RTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDV-SSCRKIFD 200
TF +L C LG+ +H K G E D +V +A+V +YAK G + FD
Sbjct: 123 VTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFD 182
Query: 201 SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIED--- 257
+ +KD W++II+G++ NN +A F M K+ +P+ +++ L C ++
Sbjct: 183 GIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIA 242
Query: 258 LNTGVQVHGQMIKNGH-QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMIL 316
+G Q+H +++ Q FV + L++ Y G + +A LF R+ KD+V+WN +I
Sbjct: 243 CRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIA 302
Query: 317 AHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS- 375
+A + ++ QL L + T+I+IL C +DL +G++IHS +++ S
Sbjct: 303 GYASNCEWF-KAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSY 361
Query: 376 VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCK 435
+ T VGNAL+ Y+ G A+ AF + KD SW++I+ + + + + L L
Sbjct: 362 LLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLH 421
Query: 436 EMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD---VYVGSSIIDMYA 492
+L E IT S ++ + C + I K+ H +++K+G HD +G++++D YA
Sbjct: 422 HLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYA 481
Query: 493 KCGHMEDSKKVFDAQVKPNEVI-YNAMICGYAHHGQ------------------------ 527
KCG++E + K+F + ++ YN+++ GY + G
Sbjct: 482 KCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVR 541
Query: 528 -------AKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIK 580
+AI +F ++ G+ PN VT + +L C+ + + Y I+
Sbjct: 542 IYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLH-----LVRQCHGYIIR 596
Query: 581 ---PESEHYSCLVDAYGRAGRLEEAYQIVQKDG 610
+ L+D Y + G L+ AY + Q D
Sbjct: 597 GGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDA 629
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 270/565 (47%), Gaps = 32/565 (5%)
Query: 137 VEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVS 193
+ G D+R F+ ++K C+++ ++ +HG K G + VS +++++YAKC +
Sbjct: 14 LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD 73
Query: 194 SCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM-CKQRVKPDQHVLSSTLRAC 252
C+K+F M+ D VW+ +++G +V+ G E + FFK M KP + L C
Sbjct: 74 DCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 253 VEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL-RDAEKLFRRIDDKDIVAW 311
V + D G +H +IK G + D V + L+++YA FG + DA F I DKD+V+W
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSW 192
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPA---GRQIH 368
N++I ++ + L T + AT+ +L C + A GRQIH
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPT--EPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 369 SLVMKSS-VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGME 427
S V++ S + V N+LV Y G+I +A F + KD SW+ +I Y N
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW 310
Query: 428 SEALELCKEMLAEG-ITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN-HDVYVGS 485
+A +L ++ +G ++ S ++ + C+QL + GK+ H + ++ Y D VG+
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 486 SIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTP 545
++I YA+ G + F + + +NA++ +A + Q + + L +T
Sbjct: 371 ALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITL 430
Query: 546 NQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKP-------ESEHYSCLVDAYGRAGR 598
+ VT L++L C + I ++ Y +K E + + L+DAY + G
Sbjct: 431 DSVTILSLLKFCINVQGIGKVKE-----VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN 485
Query: 599 LEEAYQI---VQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNI 655
+E A++I + + + ++ +LLS + N+ + + E++ +D ++ L+ I
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLSG---YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRI 542
Query: 656 YIEEGKWEEARDCREKMAKTGVKKD 680
Y E EA ++ G++ +
Sbjct: 543 YAESCCPNEAIGVFREIQARGMRPN 567
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 20/305 (6%)
Query: 330 QLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHM 389
Q +Q + + ++K+C + SDL +GR +H V K + V ++++M
Sbjct: 6 QFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNM 65
Query: 390 YSECGQIGDAFKAFVDIVCKDDSSWSSII-GTYKQNGMES----EALELCKEMLAEGITF 444
Y++C ++ D K F + D W+ ++ G G E+ +A+ E +TF
Sbjct: 66 YAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTF 125
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM-EDSKKV 503
+ LPLC+ +L GK H + IK+G D VG++++ MYAK G + D+
Sbjct: 126 -AIVLPLCV----RLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 504 FDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI 563
FD + V +NA+I G++ + A F ++ K PN T +L C A
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC--ASMD 238
Query: 564 EDTLNLFTLMLYKYKIKP---ESEHYSC--LVDAYGRAGRLEEAYQIVQKDGSES--AWR 616
++ ++ Y ++ ++ + C LV Y R GR+EEA + + GS+ +W
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 617 TLLSA 621
+++
Sbjct: 299 VVIAG 303
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 307/545 (56%), Gaps = 8/545 (1%)
Query: 147 FVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD 206
+ SL+ + ++ QIH G + + + ++ + GD++ R++FD +
Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHG 266
F W++II GY+ NN ++A+ + +M RV PD L+AC + L G VH
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 267 QMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR--RIDDKDIVAWNSMILAHAQLGQG 324
Q+ + G D FV + L+ LYA L A +F + ++ IV+W +++ A+AQ G+
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE- 202
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
++++ ++ R ++ L+++L + DL GR IH+ V+K + +
Sbjct: 203 PMEALEIFSQM-RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
+L MY++CGQ+ A F + + W+++I Y +NG EA+++ EM+ + +
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
+ S+ IS+C+Q+ ++ + + + +S Y DV++ S++IDM+AKCG +E ++ VF
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIE 564
D + + V+++AMI GY HG+A++AI ++ +E+ GV PN VTFL +L AC+H+G +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 565 DTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ---KDGSESAWRTLLSA 621
+ F M +KI P+ +HY+C++D GRAG L++AY++++ + W LLSA
Sbjct: 442 EGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 622 CRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDP 681
C+ H + ++GE +A+++ ++PS+ Y+ LSN+Y W+ + R +M + G+ KD
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 682 GSSWL 686
G SW+
Sbjct: 561 GCSWV 565
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 222/470 (47%), Gaps = 10/470 (2%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
QIH L+ GL+ F + L++ S+ G ++ A VF DL + WN +I G+++
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFG-DITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVV 178
F ++S M ++ + PD+ TF LLK CS L + +H + G + D V
Sbjct: 98 NHFQDALLMYSNM-QLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 179 SSAMVDLYAKCGDVSSCRKIFD--SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ ++ LYAKC + S R +F+ + E+ W++I+S Y N EA+ F M K
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
VKPD L S L A ++DL G +H ++K G + + + L T+YA G + A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+ LF ++ +++ WN+MI +A+ G + ++ + E+ ++ ++ + + +C
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGY-AREAIDMFHEM-INKDVRPDTISITSAISACA 334
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS 416
L R ++ V +S + +AL+ M+++CG + A F + +D WS+
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSG 476
+I Y +G EA+ L + M G+ + + +C+ + G F
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHK 454
Query: 477 YNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHH 525
N + +ID+ + GH++ + +V V+P ++ A++ H
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 192/362 (53%), Gaps = 9/362 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P + W +I + R A ++++M++ P+ +TF LL+AC+ + +G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFH--DLLERDLVAWNVMISGF 118
+H + R G + D F + L+ +Y+ L A VF L ER +V+W ++S +
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYA-KCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETD 175
AQ G+ +FS+M +++ +KPD VS+L + L ++ Q IH K G E +
Sbjct: 198 AQNGEPMEALEIFSQMRKMD-VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
+ ++ +YAKCG V++ + +FD M+ + +W+++ISGY N EA+ F +M
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+ V+PD ++S + AC ++ L ++ + ++ +++D F++S L+ ++A G +
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A +F R D+D+V W++MI+ + G+ + ++ L + + R + T + +L +C
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGR-AREAISLYRAMER-GGVHPNDVTFLGLLMAC 434
Query: 356 KN 357
+
Sbjct: 435 NH 436
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 329 bits (843), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 183/603 (30%), Positives = 317/603 (52%), Gaps = 9/603 (1%)
Query: 89 NGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVE-GLKPDNRTF 147
N NLR A VF + D+V+W +I + + LFS M V+ + PD
Sbjct: 52 NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 148 VSLLKCC---STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE 204
+LK C S + +H A K + V S+++D+Y + G + ++F M
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
++ W++II+G R +E + +F +M + D + + L+AC + + G +
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
H +I G VA+ L T+Y G ++D LF + ++D+V+W S+I+A+ ++GQ
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ- 290
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
++++ ++ R + + T ++ +C + S L G Q+H V+ ++ V N
Sbjct: 291 EVKAVETFIKM-RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
+++ MYS CG + A F + C+D SWS+IIG Y Q G E + M G
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
T ++L +S + I G+Q H A+ G + V SS+I+MY+KCG ++++ +F
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIF 469
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIE 564
+ + V AMI GYA HG++K+AI++F K G P+ VTF+++L+AC+H+G ++
Sbjct: 470 GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLD 529
Query: 565 DTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSA 621
+ F +M Y ++P EHY C+VD RAGRL +A +++ + + W TLL A
Sbjct: 530 LGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIA 589
Query: 622 CRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDP 681
C+ + + G ++A++++EL+P+ + + L+NIY G EEA + R+ M GV K+P
Sbjct: 590 CKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEP 649
Query: 682 GSS 684
G S
Sbjct: 650 GWS 652
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 159/595 (26%), Positives = 290/595 (48%), Gaps = 28/595 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE--RPNEYTFSVLLRACATPALWN 58
MPH ++V+WT++I ++ A + +A LF+ MRV+D P+ SV+L+AC +
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA 125
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
G +H V++ L + GSSL+ MY G + +C VF ++ R+ V W +I+G
Sbjct: 126 YGESLHAYAVKTSLLSSVYVGSSLLDMYKRVG-KIDKSCRVFSEMPFRNAVTWTAIITGL 184
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETD 175
G + FSEM E L D TF LK C+ L +V IH G T
Sbjct: 185 VHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTT 243
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
V++++ +Y +CG++ +F++M E+D W+S+I Y + +AV F M
Sbjct: 244 LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN 303
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+V P++ +S AC + L G Q+H ++ G + V++ ++ +Y+ G L
Sbjct: 304 SQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVS 363
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A LF+ + +DI++W+++I + Q G G R + + L ++L
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF--SWMRQSGTKPTDFALASLLSVS 421
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
N + + GRQ+H+L + + + V ++L++MYS+CG I +A F + D S +
Sbjct: 422 GNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLT 481
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF-AIK 474
++I Y ++G EA++L ++ L G S + +++C+ +++G FH F ++
Sbjct: 482 AMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG--FHYFNMMQ 539
Query: 475 SGYN----HDVYVGSSIIDMYAKCGHMEDSKKVFDAQV-KPNEVIYNAMICGYAHHG--- 526
YN + Y ++D+ + G + D++K+ + K ++V++ ++ G
Sbjct: 540 ETYNMRPAKEHY--GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIE 597
Query: 527 QAKQAIEIFTMLEKNGVTPNQVTFLAMLSAC-SHAGYIEDTLNLFTLMLYKYKIK 580
+ ++A E L+ P T L L+ S G +E+ N+ M K IK
Sbjct: 598 RGRRAAERILELD-----PTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIK 647
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 329 bits (843), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 189/696 (27%), Positives = 357/696 (51%), Gaps = 17/696 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNVV+WT+L+ + G + ++ MR NE + S+++ +C ++G
Sbjct: 103 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 162
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
QI G +V+SGLE +SL+ M + G N+ A +F + ERD ++WN + + +AQ
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMG-NVDYANYIFDQMSERDTISWNSIAAAYAQ 221
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV------MQIHGLASKFGAET 174
G R+FS M N T VS L S LG V IHGL K G ++
Sbjct: 222 NGHIEESFRIFSLMRRFH--DEVNSTTVSTL--LSVLGHVDHQKWGRGIHGLVVKMGFDS 277
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
V + ++ +YA G +F M KD W+S+++ + + R +A+ M
Sbjct: 278 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ +S L AC + G +HG ++ +G + + + L+++Y G +
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 397
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
++ ++ ++ +D+VAWN++I +A+ + +++ Q + R + T++++L +
Sbjct: 398 ESRRVLLQMPRRDVVAWNALIGGYAE-DEDPDKALAAFQTM-RVEGVSSNYITVVSVLSA 455
Query: 355 CKNKSDL-PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
C DL G+ +H+ ++ + V N+L+ MY++CG + + F + ++ +
Sbjct: 456 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 515
Query: 414 WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAI 473
W++++ +G E L+L +M + G++ +S +S+ ++L + G+Q H A+
Sbjct: 516 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 575
Query: 474 KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIE 533
K G+ HD ++ ++ DMY+KCG + + K+ V + +N +I HG ++
Sbjct: 576 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 635
Query: 534 IFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAY 593
F + + G+ P VTF+++L+ACSH G ++ L + ++ + ++P EH C++D
Sbjct: 636 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 695
Query: 594 GRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYI 650
GR+GRL EA + K ++ WR+LL++C+ H N G K+A+ + +L P D + Y+
Sbjct: 696 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 755
Query: 651 LLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
L SN++ G+WE+ + R++M +KK SW+
Sbjct: 756 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 791
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/664 (25%), Positives = 338/664 (50%), Gaps = 21/664 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACA-TPALWNV 59
MP RN V+W T++S +R G + + F M + +P+ + + L+ AC + +++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACC--VFHDLLERDLVAWNVMISG 117
G+Q+HG + +SGL D + ++++++Y G +C VF ++ +R++V+W ++ G
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYG---LVSCSRKVFEEMPDRNVVSWTSLMVG 117
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAET 174
++ G+ V ++ M EG+ + + ++ C L + QI G K G E+
Sbjct: 118 YSDKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
V ++++ + G+V IFD M E+D W+SI + Y N EE+ F M
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ + + +S+ L ++ G +HG ++K G + V + LL +YA G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
+A +F+++ KD+++WNS++ + G+ S ++ LL + ++ + T + L +
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGR-SLDALGLLCSM-ISSGKSVNYVTFTSALAA 354
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
C GR +H LV+ S + + ++GNALV MY + G++ ++ + + + +D +W
Sbjct: 355 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 414
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLA---INVGKQFHVF 471
+++IG Y ++ +AL + M EG++ ++ +S+C LL + GK H +
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPLHAY 472
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
+ +G+ D +V +S+I MYAKCG + S+ +F+ N + +NAM+ AHHG ++
Sbjct: 473 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 532
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
+++ + + GV+ +Q +F LSA + +E+ L L + K + +S ++ D
Sbjct: 533 LKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV-KLGFEHDSFIFNAAAD 591
Query: 592 AYGRAGRLEEAYQIVQKDGSES--AWRTLLSACRNHNNTKIGEKSAKKMIELN-PSDHAS 648
Y + G + E +++ + S +W L+SA H + + +M+E+ H +
Sbjct: 592 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 651
Query: 649 YILL 652
++ L
Sbjct: 652 FVSL 655
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 189/696 (27%), Positives = 357/696 (51%), Gaps = 17/696 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNVV+WT+L+ + G + ++ MR NE + S+++ +C ++G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
QI G +V+SGLE +SL+ M + G N+ A +F + ERD ++WN + + +AQ
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMG-NVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV------MQIHGLASKFGAET 174
G R+FS M N T VS L S LG V IHGL K G ++
Sbjct: 239 NGHIEESFRIFSLMRRFH--DEVNSTTVSTL--LSVLGHVDHQKWGRGIHGLVVKMGFDS 294
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
V + ++ +YA G +F M KD W+S+++ + + R +A+ M
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ +S L AC + G +HG ++ +G + + + L+++Y G +
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
++ ++ ++ +D+VAWN++I +A+ + +++ Q + R + T++++L +
Sbjct: 415 ESRRVLLQMPRRDVVAWNALIGGYAE-DEDPDKALAAFQTM-RVEGVSSNYITVVSVLSA 472
Query: 355 CKNKSDL-PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
C DL G+ +H+ ++ + V N+L+ MY++CG + + F + ++ +
Sbjct: 473 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 532
Query: 414 WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAI 473
W++++ +G E L+L +M + G++ +S +S+ ++L + G+Q H A+
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 592
Query: 474 KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIE 533
K G+ HD ++ ++ DMY+KCG + + K+ V + +N +I HG ++
Sbjct: 593 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 652
Query: 534 IFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAY 593
F + + G+ P VTF+++L+ACSH G ++ L + ++ + ++P EH C++D
Sbjct: 653 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLL 712
Query: 594 GRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYI 650
GR+GRL EA + K ++ WR+LL++C+ H N G K+A+ + +L P D + Y+
Sbjct: 713 GRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYV 772
Query: 651 LLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
L SN++ G+WE+ + R++M +KK SW+
Sbjct: 773 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 808
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/664 (25%), Positives = 338/664 (50%), Gaps = 21/664 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACA-TPALWNV 59
MP RN V+W T++S +R G + + F M + +P+ + + L+ AC + +++
Sbjct: 18 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 77
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACC--VFHDLLERDLVAWNVMISG 117
G+Q+HG + +SGL D + ++++++Y G +C VF ++ +R++V+W ++ G
Sbjct: 78 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYG---LVSCSRKVFEEMPDRNVVSWTSLMVG 134
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAET 174
++ G+ V ++ M EG+ + + ++ C L + QI G K G E+
Sbjct: 135 YSDKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 193
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
V ++++ + G+V IFD M E+D W+SI + Y N EE+ F M
Sbjct: 194 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 253
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ + + +S+ L ++ G +HG ++K G + V + LL +YA G
Sbjct: 254 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 313
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
+A +F+++ KD+++WNS++ + G+ S ++ LL + ++ + T + L +
Sbjct: 314 EANLVFKQMPTKDLISWNSLMASFVNDGR-SLDALGLLCSM-ISSGKSVNYVTFTSALAA 371
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
C GR +H LV+ S + + ++GNALV MY + G++ ++ + + + +D +W
Sbjct: 372 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 431
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLA---INVGKQFHVF 471
+++IG Y ++ +AL + M EG++ ++ +S+C LL + GK H +
Sbjct: 432 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPLHAY 489
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
+ +G+ D +V +S+I MYAKCG + S+ +F+ N + +NAM+ AHHG ++
Sbjct: 490 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 549
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
+++ + + GV+ +Q +F LSA + +E+ L L + K + +S ++ D
Sbjct: 550 LKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV-KLGFEHDSFIFNAAAD 608
Query: 592 AYGRAGRLEEAYQIVQKDGSES--AWRTLLSACRNHNNTKIGEKSAKKMIELN-PSDHAS 648
Y + G + E +++ + S +W L+SA H + + +M+E+ H +
Sbjct: 609 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 668
Query: 649 YILL 652
++ L
Sbjct: 669 FVSL 672
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/562 (26%), Positives = 281/562 (50%), Gaps = 14/562 (2%)
Query: 85 MYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDN 144
MY+ G ++ A +F + R+ V+WN M+SG +VG + F +M ++ G+KP +
Sbjct: 1 MYTKFG-RVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL-GIKPSS 58
Query: 145 RTFVSLLKCCSTLG----EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFD 200
SL+ C G E +Q+HG +K G +D VS+A++ LY G VS RK+F+
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 201 SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNT 260
M +++ W+S++ GY+ EE + +K M + V +++ +S + +C ++D +
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
G Q+ GQ++K+G ++ V + L+++ + G + A +F ++ ++D ++WNS+ A+AQ
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 321 LG--QGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSH 378
G + S R L++ H ++ T+ +L + GR IH LV+K
Sbjct: 239 NGHIEESFRIFSLMRRFHD----EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 294
Query: 379 PTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEML 438
V N L+ MY+ G+ +A F + KD SW+S++ ++ +G +AL L M+
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 439 AEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHME 498
+ G + + +++C G+ H + SG ++ +G++++ MY K G M
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414
Query: 499 DSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACS 558
+S++V + + V +NA+I GYA +A+ F + GV+ N +T +++LSAC
Sbjct: 415 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 474
Query: 559 HAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES--AWR 616
G + + + + + + L+ Y + G L + + + + W
Sbjct: 475 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 534
Query: 617 TLLSACRNHNNTKIGEKSAKKM 638
+L+A +H + + K KM
Sbjct: 535 AMLAANAHHGHGEEVLKLVSKM 556
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 206/696 (29%), Positives = 354/696 (50%), Gaps = 35/696 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M HR++V+W T+++ L G K+ Q F M + + TFS ++ AC++ +G
Sbjct: 249 MEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLG 308
Query: 61 LQIHGVLVRSGL--ERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
+HG++++SG E G+S++ MYS G + A VF +L+ RD+++ N +++GF
Sbjct: 309 ESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG-DTEAAETVFEELVCRDVISSNAILNGF 367
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAETD 175
A G F + ++M V+ ++PD T VS+ C L E +HG + ++
Sbjct: 368 AANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSR 427
Query: 176 AV-VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
A+ V ++++D+Y KCG + +F + +D W+S+IS ++ N +A + FK++
Sbjct: 428 ALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV 487
Query: 235 KQRV--KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGG 292
+ K + + L +C + L G VH + K G F+
Sbjct: 488 SEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL------------- 534
Query: 293 LRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAIL 352
+L + +D+ +WNS+I A G S++ Q + R ++ TL+ +
Sbjct: 535 -----RLETMSETRDLTSWNSVISGCASSGH-HLESLRAFQAMSREGKIRHDLITLLGTI 588
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS 412
+ N + GR H L +KS T + N L+ MY C I A K F I +
Sbjct: 589 SASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLC 648
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFA 472
SW+ +I QN E +L + + E T L +S+ +QL + + G Q H
Sbjct: 649 SWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGL---LSASTQLGSTSYGMQAHCHL 705
Query: 473 IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAI 532
I+ G+ + +V ++++DMY+ CG +E KVF + +N++I + HG ++A+
Sbjct: 706 IRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAM 765
Query: 533 EIFTMLEKNG-VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
E+F L N + PN+ +F+++LSACSH+G+I++ L+ + M K+ +KP +EH +VD
Sbjct: 766 ELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVD 825
Query: 592 AYGRAGRLEEAYQIVQKDGSE---SAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHAS 648
GRAG+L EAY+ + G W LLSAC H +TK+G++ A+ + E+ P + +
Sbjct: 826 MLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASY 885
Query: 649 YILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
YI L+N Y+ G WEEA R+ + +KK PG S
Sbjct: 886 YISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYS 921
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 179/764 (23%), Positives = 326/764 (42%), Gaps = 121/764 (15%)
Query: 22 VPKAFQLFNDMRVMDERPNEYTFSVL---LRACATPALWNVGLQIHGVLVRSGLERDKFA 78
P LF+++ + R E +F L LR+ +H ++ GL +D
Sbjct: 65 TPIVHNLFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLAT 124
Query: 79 GSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVE 138
S L+ Y G L + C+F +L E+D++ WN MI+ Q G + LF EM +
Sbjct: 125 SSKLLTFYGRTG-ELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIH-K 182
Query: 139 GLKPDNRTFVSLL---------KCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKC 189
G + D+ T + + CS L H LA + G D+ + +A+++LYAK
Sbjct: 183 GNEFDSTTLLLAASALSSLHLSRKCSML------HCLAIETGLVGDSSLCNALMNLYAKG 236
Query: 190 GDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTL 249
++SS +F ME +D W++I++ N +++ +FK M + D S +
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 250 RACVEIEDLNTGVQVHGQMIKNGHQNDCFVA--SVLLTLYANFGGLRDAEKLFRRIDDKD 307
AC IE+L G +HG +IK+G+ + V+ + ++++Y+ G AE +F + +D
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 308 IVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI 367
+++ N+++ A G + +L ++ +Q AT+++I C + S GR +
Sbjct: 357 VISSNAILNGFAANGM-FEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAV 415
Query: 368 HSLVMKSSVSHPTL-VGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGM 426
H ++ + L V N+++ MY +CG A F +D SW+S+I + QNG
Sbjct: 416 HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGF 475
Query: 427 ESEALELCKEMLAE--GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSG-------- 476
+A L KE+++E F+ ++ ++SC ++ GK H + K G
Sbjct: 476 THKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLR 535
Query: 477 -----YNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEV------------------ 513
D+ +S+I A GH +S + F A + ++
Sbjct: 536 LETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLG 595
Query: 514 ----------------------IYNAMICGYAHHGQAKQAIEIFTMLE------------ 539
+ N +I Y + A+++F ++
Sbjct: 596 LVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVIS 655
Query: 540 -----KNG-----------VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK-YKIKPE 582
K G + PN++TF+ +LSA + G + ++ + ++ P
Sbjct: 656 ALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPF 715
Query: 583 SEHYSCLVDAYGRAGRLEEAYQIVQKDG--SESAWRTLLSACRNHNNTKIGEKSAKKMIE 640
+ LVD Y G LE ++ + G S SAW +++SA H +GEK+ + E
Sbjct: 716 VS--AALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISA---HGFHGMGEKAMELFKE 770
Query: 641 LNPS-----DHASYILLSNIYIEEGKWEEARDCREKM-AKTGVK 678
L+ + + +S+I L + G +E ++M K GVK
Sbjct: 771 LSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVK 814
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 305/550 (55%), Gaps = 13/550 (2%)
Query: 145 RTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGD-VSSCRKIFD 200
+ + SLL+ C+ + + Q H K G ETD V ++++ LY K G + R++FD
Sbjct: 62 KLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFD 121
Query: 201 SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNT 260
KD W+S++SGY +A+ F +M + ++ LSS ++AC E+ ++
Sbjct: 122 GRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRL 181
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
G HG +I +G + + F++S L LY DA ++F + + D++ W +++ A ++
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 321 LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPT 380
++ L +HR L G+T +L +C N L G++IH ++ + +
Sbjct: 242 -NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNV 300
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
+V ++L+ MY +CG + +A + F + K+ SWS+++G Y QNG +A+E+ +EM +
Sbjct: 301 VVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK 360
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
+ Y + +C+ L A+ +GK+ H ++ G +V V S++ID+Y K G ++ +
Sbjct: 361 DL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 501 KKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHA 560
+V+ N + +NAM+ A +G+ ++A+ F + K G+ P+ ++F+A+L+AC H
Sbjct: 417 SRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHT 476
Query: 561 GYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRT 617
G +++ N F LM Y IKP +EHYSC++D GRAG EEA ++++ S W
Sbjct: 477 GMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 618 LLSAC-RNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTG 676
LL C N + +++ E+ AK+M+EL P H SY+LLSN+Y G+ +A + R+ M + G
Sbjct: 537 LLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRG 596
Query: 677 VKKDPGSSWL 686
V K G SW+
Sbjct: 597 VAKTVGQSWI 606
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/572 (25%), Positives = 277/572 (48%), Gaps = 27/572 (4%)
Query: 18 RAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKF 77
+ G + +A ++ N + ++ LL+ C + G+Q H +V+SGLE D+
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 78 AGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEV 137
G+SL+ +Y G +R+ VF +D ++W M+SG+ + +F EM
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 138 EGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSS 194
GL + T S +K CS LGEV HG+ G E + +SS + LY +
Sbjct: 158 -GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 195 CRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR-VKPDQHVLSSTLRACV 253
R++FD M E D W++++S ++ N+ EEA+ F M + + + PD + L AC
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 254 EIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNS 313
+ L G ++HG++I NG ++ V S LL +Y G +R+A ++F + K+ V+W++
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 314 MILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK 373
++ + Q G+ +++++ +E+ L G +LK+C + + G++IH ++
Sbjct: 337 LLGGYCQNGE-HEKAIEIFREMEE-KDLYCFG----TVLKACAGLAAVRLGKEIHGQYVR 390
Query: 374 SSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALEL 433
+V +AL+ +Y + G I A + + + ++ +W++++ QNG EA+
Sbjct: 391 RGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSF 450
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHV-----FAIKSGYNHDVYVGSSII 488
+M+ +GI S +++C ++ G+ + V + IK G H S +I
Sbjct: 451 FNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY----SCMI 506
Query: 489 DMYAKCGHMEDSKKVFD-AQVKPNEVIYNAMICGYAHHGQAKQAIEIFT--MLEKNGVTP 545
D+ + G E+++ + + A+ + + ++ ++ A + A + E M+E + P
Sbjct: 507 DLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMME---LEP 563
Query: 546 NQVTFLAMLSACSHA-GYIEDTLNLFTLMLYK 576
+LS A G D LN+ LM+ +
Sbjct: 564 KYHMSYVLLSNMYKAIGRHGDALNIRKLMVRR 595
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 226/441 (51%), Gaps = 13/441 (2%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
++ ++WT+++S ++ KA ++F +M NE+T S ++AC+ +G
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCF 185
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
HGV++ G E + F S+L Y+Y N + DA VF ++ E D++ W ++S F++
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPV-DARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSS 180
+ LF M +GL PD TF ++L C L + Q IHG G ++ VV S
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
+++D+Y KCG V R++F+ M +K++ WS+++ GY N E+A+ F++M ++
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK---- 360
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
D + + L+AC + + G ++HGQ ++ G + V S L+ LY G + A +++
Sbjct: 361 DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
++ ++++ WN+M+ A AQ G+G ++ ++ + ++ + IAIL +C +
Sbjct: 421 SKMSIRNMITWNAMLSALAQNGRG-EEAVSFFNDMVK-KGIKPDYISFIAILTACGHTGM 478
Query: 361 LPAGRQIHSLVMKSSVSHP-TLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSII 418
+ GR L+ KS P T + ++ + G +A C++D+S W ++
Sbjct: 479 VDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538
Query: 419 GTYKQNGMESEALE-LCKEML 438
G N S E + K M+
Sbjct: 539 GPCAANADASRVAERIAKRMM 559
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 169/344 (49%), Gaps = 15/344 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNV 59
MP +V+ WT ++S+ + +A LF M R P+ TF +L AC
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G +IHG L+ +G+ + SSL+ MY GS +R+A VF+ + +++ V+W+ ++ G+
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGS-VREARQVFNGMSKKNSVSWSALLGGYC 342
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDA 176
Q G+ +F EM E D F ++LK C+ L V +IHG + G +
Sbjct: 343 QNGEHEKAIEIFREMEE-----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNV 397
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+V SA++DLY K G + S +++ M ++ W++++S N RGEEAV FF DM K+
Sbjct: 398 IVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKK 457
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN-GHQNDCFVASVLLTLYANFGGLRD 295
+KPD + L AC ++ G M K+ G + S ++ L G +
Sbjct: 458 GIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEE 517
Query: 296 AEKLFRRIDDK-DIVAWNSMI---LAHAQLGQGSSRSMQLLQEL 335
AE L R + + D W ++ A+A + + R + + EL
Sbjct: 518 AENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMEL 561
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 298/548 (54%), Gaps = 14/548 (2%)
Query: 147 FVSLLKCC----STLG-EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDS 201
F LL+ C S G + +Q H L S F AE + S +VD KCGD+ R++FD
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAE---ISGSKLVDASLKCGDIDYARQVFDG 124
Query: 202 MEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
M E+ W+S+I+ + R +EAV ++ M V PD++ LSS +A ++
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 262 VQVHGQMIKNGHQ-NDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
+ HG + G + ++ FV S L+ +Y FG R+A+ + R+++KD+V ++I+ ++Q
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 321 LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPT 380
G+ + +++ Q + +Q T ++L SC N D+ G+ IH L++KS
Sbjct: 245 KGE-DTEAVKAFQSM-LVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESAL 302
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
+L+ MY C + D+ + F I + SW+S+I QNG E AL ++M+ +
Sbjct: 303 ASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD 362
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
I S++L + CS L G+Q H K G++ D Y GS +ID+Y KCG + +
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 501 KKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHA 560
+ VFD + + + N MI YA +G ++A+++F + G+ PN VT L++L AC+++
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNS 482
Query: 561 GYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK--DGSESAWRTL 618
+E+ LF K KI ++HY+C+VD GRAGRLEEA + + + WRTL
Sbjct: 483 RLVEEGCELFD-SFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTL 541
Query: 619 LSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVK 678
LSAC+ H ++ E+ +K++E+ P D + IL+SN+Y GKW + + KM +K
Sbjct: 542 LSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLK 601
Query: 679 KDPGSSWL 686
K+P SW+
Sbjct: 602 KNPAMSWV 609
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 208/426 (48%), Gaps = 8/426 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R++VTW +LI+ ++ +A +++ M + P+EYT S + +A + +L
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 61 LQIHGVLVRSGLE-RDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
+ HG+ V GLE + F GS+LV MY G R+A V + E+D+V +I G++
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKT-REAKLVLDRVEEKDVVLITALIVGYS 243
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDA 176
Q G+ + F M VE ++P+ T+ S+L C L ++ IHGL K G E+
Sbjct: 244 QKGEDTEAVKAFQSML-VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESAL 302
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
++++ +Y +C V ++F +E + W+S+ISG N R E A+ F+ M +
Sbjct: 303 ASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD 362
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+KP+ LSS LR C + G Q+HG + K G D + S L+ LY G A
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+F + + D+++ N+MI ++AQ G G R L E LQ T++++L +C
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFG--REALDLFERMINLGLQPNDVTVLSVLLACN 480
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS 416
N + G ++ K + +V + G++ +A +++ D W +
Sbjct: 481 NSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRT 540
Query: 417 IIGTYK 422
++ K
Sbjct: 541 LLSACK 546
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 174/357 (48%), Gaps = 7/357 (1%)
Query: 243 HVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRR 302
H S LR C++ ++ + M+K+G + S L+ G + A ++F
Sbjct: 66 HNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFDG 124
Query: 303 IDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLP 362
+ ++ IV WNS+I A+ + S ++++ + L T ++ TL ++ K+ + S
Sbjct: 125 MSERHIVTWNSLI-AYLIKHRRSKEAVEMYR-LMITNNVLPDEYTLSSVFKAFSDLSLEK 182
Query: 363 AGRQIHSL--VMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
++ H L ++ VS+ VG+ALV MY + G+ +A + KD +++I
Sbjct: 183 EAQRSHGLAVILGLEVSN-VFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 421 YKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD 480
Y Q G ++EA++ + ML E + Y+ + SC L I GK H +KSG+
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK 540
+ +S++ MY +C ++DS +VF PN+V + ++I G +G+ + A+ F + +
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 541 NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAG 597
+ + PN T + L CS+ E+ + + + KY + S L+D YG+ G
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI-VTKYGFDRDKYAGSGLIDLYGKCG 417
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 319 bits (817), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 177/575 (30%), Positives = 315/575 (54%), Gaps = 40/575 (6%)
Query: 148 VSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYA--KCGDVSSCRKIFDSMEEK 205
+SL++ C +L ++ Q HG + G +D +S + + A + RK+FD + +
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQV 264
++F W+++I Y ++ F DM + + P+++ ++A E+ L+ G +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
HG +K+ +D FVA+ L+ Y + G L A K+F I +KD+V+WNSMI Q G
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG-S 212
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
++++L +++ + ++ T++ +L +C +L GRQ+ S + ++ V+ + N
Sbjct: 213 PDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS---------------------------- 416
A++ MY++CG I DA + F + KD+ +W++
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 417 ---IIGTYKQNGMESEALELCKEM-LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFA 472
+I Y+QNG +EAL + E+ L + + +L +S+C+Q+ A+ +G+ H +
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 473 IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAI 532
K G + +V S++I MY+KCG +E S++VF++ K + +++AMI G A HG +A+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 533 EIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA 592
++F +++ V PN VTF + ACSH G +++ +LF M Y I PE +HY+C+VD
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 593 YGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASY 649
GR+G LE+A + ++ S S W LL AC+ H N + E + +++EL P + ++
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 571
Query: 650 ILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+LLSNIY + GKWE + R+ M TG+KK+PG S
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 243/500 (48%), Gaps = 48/500 (9%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYS-NNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q HG ++R+G D ++ S L M + ++ ++L A VF ++ + + AWN +I +A
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFGAETDAV 177
D + F +M P+ TF L+K S+L +HG+A K +D
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V+++++ Y CGD+ S K+F +++EKD W+S+I+G+ ++A+ FK M +
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
VK + L AC +I +L G QV + +N + +A+ +L +Y G + DA+
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 298 KLFRRIDD-------------------------------KDIVAWNSMILAHAQLGQGSS 326
+LF +++ KDIVAWN++I A+ Q G+ +
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK-PN 346
Query: 327 RSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNAL 386
++ + EL ++++ TL++ L +C L GR IHS + K + V +AL
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406
Query: 387 VHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEML-----AEG 441
+HMYS+CG + + + F + +D WS++IG +G +EA+++ +M G
Sbjct: 407 IHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466
Query: 442 ITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
+TFT+ +CS ++ + FH G + + I+D+ + G++E +
Sbjct: 467 VTFTN-----VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 501 KKVFDA-QVKPNEVIYNAMI 519
K +A + P+ ++ A++
Sbjct: 522 VKFIEAMPIPPSTSVWGALL 541
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 196/391 (50%), Gaps = 40/391 (10%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
+P N W TLI ++ + F DM + PN+YTF L++A A + ++
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G +HG+ V+S + D F +SL++ Y + G +L AC VF + E+D+V+WN MI+GF
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCG-DLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDA 176
Q G LF +M E E +K + T V +L C+ + + Q+ + +
Sbjct: 209 QKGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTV----------------- 219
+++AM+D+Y KCG + +++FD+MEEKDN W++++ GY +
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 220 --------------NNRGEEAVHFFKDMCKQR-VKPDQHVLSSTLRACVEIEDLNTGVQV 264
N + EA+ F ++ Q+ +K +Q L STL AC ++ L G +
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
H + K+G + + V S L+ +Y+ G L + ++F ++ +D+ W++MI A G G
Sbjct: 388 HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
+ ++ + ++ + +++ G T + +C
Sbjct: 448 -NEAVDMFYKM-QEANVKPNGVTFTNVFCAC 476
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 178/397 (44%), Gaps = 40/397 (10%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
++VV+W ++I+ ++ GS KA +LF M D + + T +L ACA G Q+
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVF----------------------- 100
+ + + + ++++ MY+ GS + DA +F
Sbjct: 255 CSYIEENRVNVNLTLANAMLDMYTKCGS-IEDAKRLFDAMEEKDNVTWTTMLDGYAISED 313
Query: 101 --------HDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK 152
+ + ++D+VAWN +IS + Q G +F E+ + +K + T VS L
Sbjct: 314 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373
Query: 153 CCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
C+ +G + IH K G + V+SA++ +Y+KCGD+ R++F+S+E++D FV
Sbjct: 374 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 433
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
WS++I G ++ G EAV F M + VKP+ ++ AC ++ + QM
Sbjct: 434 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Query: 270 KN-GHQNDCFVASVLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMILA---HAQLGQG 324
N G + + ++ + G L A K + W +++ A HA L
Sbjct: 494 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 553
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
+LL+ R + + + A L +N S+L
Sbjct: 554 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSEL 590
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 207/705 (29%), Positives = 343/705 (48%), Gaps = 110/705 (15%)
Query: 47 LLRACATPALWNVGLQIHGVLVRSG-LERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE 105
LL++C++ + Q +G+L++ G L + L+ MYS +G + A +F ++ +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSG-KMGIARNLFDEMPD 90
Query: 106 RDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHG 165
R+ +WN MI G+ G+ R F M E +G
Sbjct: 91 RNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYS------------------------ 126
Query: 166 LASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEE 225
+ VVS +AK G++S R++F++M EKD +S++ GY +N EE
Sbjct: 127 --------WNVVVSG-----FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEE 173
Query: 226 AVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLT 285
A+ FK++ D L++ L+AC E+E L G Q+H Q++ G + D + S L+
Sbjct: 174 ALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVN 230
Query: 286 LYANFGGLR-------------------------------DAEKLFRRIDDKDIVAWNSM 314
+YA G LR ++ LF R ++ ++ WNSM
Sbjct: 231 VYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSM 290
Query: 315 ILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIH------ 368
I + ++ L E+ T + TL A++ +C L G+Q+H
Sbjct: 291 ISGYIA-NNMKMEALVLFNEMRNET--REDSRTLAAVINACIGLGFLETGKQMHCHACKF 347
Query: 369 ----SLVMKSSV---------------------SHPTLVGNALVHMYSECGQIGDAFKAF 403
+V+ S++ S+ T++ N+++ +Y CG+I DA + F
Sbjct: 348 GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVF 407
Query: 404 VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
I K SW+S+ + QNG E LE +M + SL IS+C+ + ++
Sbjct: 408 ERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLE 467
Query: 464 VGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYA 523
+G+Q A G + D V SS+ID+Y KCG +E ++VFD VK +EV +N+MI GYA
Sbjct: 468 LGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYA 527
Query: 524 HHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPES 583
+GQ +AI++F + G+ P Q+TF+ +L+AC++ G +E+ LF M + P+
Sbjct: 528 TNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDK 587
Query: 584 EHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIE 640
EH+SC+VD RAG +EEA +V++ D S W ++L C + +G+K+A+K+IE
Sbjct: 588 EHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIE 647
Query: 641 LNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSW 685
L P + +Y+ LS I+ G WE + R+ M + V K+PGSSW
Sbjct: 648 LEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/621 (23%), Positives = 269/621 (43%), Gaps = 120/621 (19%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RN +W T+I ++ +G + + F+ M P +S WNV
Sbjct: 88 MPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM------PERDGYS-----------WNV- 129
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
V SG + L A +F+ + E+D+V N ++ G+
Sbjct: 130 -------VVSGFAK---------------AGELSVARRLFNAMPEKDVVTLNSLLHGYIL 167
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
G RLF E+ D T ++LK C+ L + QIH G E D+
Sbjct: 168 NGYAEEALRLFKEL----NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSK 223
Query: 178 VSSAMVDLYAKCGD-------------------------------VSSCRKIFDSMEEKD 206
++S++V++YAKCGD V+ R +FD +
Sbjct: 224 MNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRC 283
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHG 266
+W+S+ISGY NN EA+ F +M + + D L++ + AC+ + L TG Q+H
Sbjct: 284 VILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHC 342
Query: 267 QMIKNGHQNDCFVASVLLTLYANFGG-------------------------------LRD 295
K G +D VAS LL +Y+ G + D
Sbjct: 343 HACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDD 402
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A+++F RI++K +++WNSM +Q G + +++ ++H+ L +L +++ +C
Sbjct: 403 AKRVFERIENKSLISWNSMTNGFSQNG-CTVETLEYFHQMHK-LDLPTDEVSLSSVISAC 460
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+ S L G Q+ + + +V ++L+ +Y +CG + + F +V D+ W+
Sbjct: 461 ASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWN 520
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIK 474
S+I Y NG EA++L K+M GI T + + +++C+ + G++ F +
Sbjct: 521 SMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVD 580
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKV-----FDAQVKP-NEVIYNAMICGYAHHGQA 528
G+ D S ++D+ A+ G++E++ + FD + ++ + GY G+
Sbjct: 581 HGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGK- 639
Query: 529 KQAIEIFTMLEKNGVTPNQVT 549
K A +I + +N V Q++
Sbjct: 640 KAAEKIIELEPENSVAYVQLS 660
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/606 (29%), Positives = 317/606 (52%), Gaps = 15/606 (2%)
Query: 91 SNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLK-PDNRTFVS 149
S+ RD +F + +R +V W +++ +A+ F +LF +M PD+ TF +
Sbjct: 96 SSARD---LFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 150 LLKCCSTL---GEVMQIHGLASKFGAETDA--VVSSAMVDLYAKCGDVSSCRKIFDSMEE 204
LL C+ V Q+H A K G +T+ VS+ ++ Y + + +F+ + E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
KD+ ++++I+GY + E++H F M + +P S L+A V + D G Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
H + G D V + +L Y+ + + LF + + D V++N +I +++Q Q
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
+ S+ +E+ + + +L N S L GRQ+H + ++ VGN
Sbjct: 333 EA-SLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN 390
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
+LV MY++C +A F + + SW+++I Y Q G+ L+L +M +
Sbjct: 391 SLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRA 450
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
+ + + + ++ +GKQ H F I+SG +V+ GS ++DMYAKCG ++D+ +VF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIE 564
+ N V +NA+I +A +G + AI F + ++G+ P+ V+ L +L+ACSH G++E
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570
Query: 565 DTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSA 621
F M Y I P+ +HY+C++D GR GR EA +++ + + E W ++L+A
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Query: 622 CRNHNNTKIGEKSAKKMIELNP-SDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
CR H N + E++A+K+ + D A+Y+ +SNIY G+WE+ RD ++ M + G+KK
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690
Query: 681 PGSSWL 686
P SW+
Sbjct: 691 PAYSWV 696
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/555 (25%), Positives = 271/555 (48%), Gaps = 22/555 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE--RPNEYTFSVLLRACATPALWN 58
MP R VVTWT L+ + R +AF+LF M P+ TF+ LL C N
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRD-ACCVFHDLLERDLVAWNVMISG 117
Q+H V+ G + + F S V + S D AC +F ++ E+D V +N +I+G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAET 174
+ + G + LF +M + G +P + TF +LK L + Q+H L+ G
Sbjct: 225 YEKDGLYTESIHLFLKMRQ-SGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
DA V + ++D Y+K V R +FD M E D ++ +IS Y+ ++ E ++HFF++M
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ 343
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
++ L + L G Q+H Q + + V + L+ +YA
Sbjct: 344 CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE 403
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
+AE +F+ + + V+W ++I + Q G + ++L ++ R ++L+ +T +LK+
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGA-GLKLFTKM-RGSNLRADQSTFATVLKA 461
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
+ + L G+Q+H+ +++S G+ LV MY++CG I DA + F ++ ++ SW
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 521
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFH----- 469
+++I + NG A+ +M+ G+ S S+ +++CS + G ++
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 581
Query: 470 VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVKPNEVIYNAMICG---YAHH 525
++ I H + ++D+ + G +++K+ D +P+E+++++++ + +
Sbjct: 582 IYGITPKKKH----YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQ 637
Query: 526 GQAKQAIEIFTMLEK 540
A++A E +EK
Sbjct: 638 SLAERAAEKLFSMEK 652
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 233/476 (48%), Gaps = 17/476 (3%)
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
+ V ++ M+ + K GDVSS R +FD+M ++ W+ ++ Y N+ +EA F+ MC
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 235 KQR--VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCF--VASVLLTLYANF 290
+ PD ++ L C + N QVH +K G + F V++VLL Y
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
L A LF I +KD V +N++I + + G + S+ L ++ R + Q T
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGL-YTESIHLFLKM-RQSGHQPSDFTFSG 255
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD 410
+LK+ D G+Q+H+L + + S VGN ++ YS+ ++ + F ++ D
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 411 DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHV 470
S++ +I +Y Q +L +EM G ++ +S + L ++ +G+Q H
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQ 530
A+ + + ++VG+S++DMYAKC E+++ +F + + V + A+I GY G
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 531 AIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY---- 586
+++FT + + + +Q TF +L A + + L L+ + I+ +
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASL-----LLGKQLHAFIIRSGNLENVFSG 490
Query: 587 SCLVDAYGRAGRLEEAYQIVQK--DGSESAWRTLLSACRNHNNTKIGEKSAKKMIE 640
S LVD Y + G +++A Q+ ++ D + +W L+SA ++ + + + KMIE
Sbjct: 491 SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/622 (29%), Positives = 330/622 (53%), Gaps = 47/622 (7%)
Query: 73 ERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFS 132
ERD+F ++++ YSN+ L DA +F ++ ++WN +ISG+ + G LF
Sbjct: 56 ERDEFTWNTMIVAYSNS-RRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFW 114
Query: 133 EMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKC 189
EM + +G+KP+ T S+L+ C++L ++ QIHG K G + D V + ++ +YA+C
Sbjct: 115 EM-QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQC 173
Query: 190 GDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSST 248
+S +F++ME EK+N W+S+++GY+ N +A+ F+D+ ++ + +Q+ S
Sbjct: 174 KRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSV 233
Query: 249 LRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDI 308
L AC + GVQVH ++K+G + + +V S L+ +YA + A L ++ D+
Sbjct: 234 LTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
Query: 309 VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS-CKNKSDLPAGRQI 367
V+WNSMI+ + G ++ + +H ++I T+ +IL +++++
Sbjct: 294 VSWNSMIVGCVRQGL-IGEALSMFGRMHER-DMKIDDFTIPSILNCFALSRTEMKIASSA 351
Query: 368 HSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGME 427
H L++K+ + LV NALV MY++ G + A K F ++ KD SW++++ NG
Sbjct: 352 HCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSY 411
Query: 428 SEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSI 487
EAL+L M GIT +S+ ++L + G+Q H IKSG+ + V +S+
Sbjct: 412 DEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSL 471
Query: 488 IDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQ 547
+ MY KCG +ED+ +F++ + + + +I GYA KNG+
Sbjct: 472 VTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA----------------KNGL---- 511
Query: 548 VTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAG---RLEEAYQ 604
+ED F M Y I P EHY+C++D +GR+G ++E+
Sbjct: 512 ---------------LEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLH 556
Query: 605 IVQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEE 664
++ + + W+ +L+A R H N + GE++AK ++EL P++ Y+ LSN+Y G+ +E
Sbjct: 557 QMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDE 616
Query: 665 ARDCREKMAKTGVKKDPGSSWL 686
A + R M + K+PG SW+
Sbjct: 617 AANVRRLMKSRNISKEPGCSWV 638
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 147/582 (25%), Positives = 272/582 (46%), Gaps = 53/582 (9%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P +N ++W LIS + ++GS +AF LF +M+ +PNEYT +LR C + L G
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLL-ERDLVAWNVMISGFAQ 120
QIHG +++G + D + L+ MY+ + +A +F + E++ V W M++G++Q
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYA-QCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
G F ++ EG + + TF S+L C+++ +Q+H K G +T+
Sbjct: 205 NGFAFKAIECFRDL-RREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V SA++D+YAKC ++ S R + + ME D W+S+I G EA+ F M ++
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Query: 238 VKPDQHVLSSTLRACVEIE--DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+K D + S L C + ++ H ++K G+ V + L+ +YA G +
Sbjct: 324 MKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDS 382
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A K+F + +KD+++W +++ + G +++L + R + ++L +
Sbjct: 383 ALKVFEGMIEKDVISWTALVTGNTHNGS-YDEALKLFCNM-RVGGITPDKIVTASVLSAS 440
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+ L G+Q+H +KS V N+LV MY++CG + DA F + +D +W+
Sbjct: 441 AELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWT 500
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS 475
+I Y +NG+ +A M V+ I
Sbjct: 501 CLIVGYAKNGLLEDAQRYFDSMRT------------------------------VYGITP 530
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNAMICGYAHHG---QAKQA 531
G H + +ID++ + G +++ +V+P+ ++ A++ HG ++A
Sbjct: 531 GPEHY----ACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERA 586
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
+ LE N N V ++ + + S AG ++ N+ LM
Sbjct: 587 AKTLMELEPN----NAVPYVQLSNMYSAAGRQDEAANVRRLM 624
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 184/381 (48%), Gaps = 38/381 (9%)
Query: 267 QMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSS 326
QM + D F + ++ Y+N L DAEKLFR K+ ++WN++I + + G
Sbjct: 49 QMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGS-KV 107
Query: 327 RSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNAL 386
+ L E+ ++ ++ TL ++L+ C + L G QIH +K+ V N L
Sbjct: 108 EAFNLFWEM-QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGL 166
Query: 387 VHMYSECGQIGDAFKAFVDIVC-KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFT 445
+ MY++C +I +A F + K++ +W+S++ Y QNG +A+E +++ EG
Sbjct: 167 LAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSN 226
Query: 446 SYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD 505
Y+ P +++C+ + A VG Q H +KSG+ ++YV S++IDMYAKC ME ++ + +
Sbjct: 227 QYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLE 286
Query: 506 AQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIED 565
+ V +N+MI G G +A+ +F + + + + T I
Sbjct: 287 GMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT-------------IPS 333
Query: 566 TLNLFTLMLYKYKIKPESEH--------------YSCLVDAYGRAGRLEEAYQI----VQ 607
LN F L + KI S H + LVD Y + G ++ A ++ ++
Sbjct: 334 ILNCFALSRTEMKI-ASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE 392
Query: 608 KDGSESAWRTLLSACRNHNNT 628
KD +W L++ HN +
Sbjct: 393 KD--VISWTALVTG-NTHNGS 410
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 4/244 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M ++V++WT L++ + GS +A +LF +MRV P++ + +L A A L G
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+HG ++SG +SLV MY+ GS L DA +F+ + RDL+ W +I G+A+
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGS-LEDANVIFNSMEIRDLITWTCLIVGYAK 508
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G QR F M V G+ P + ++ G+ +++ L + E DA V
Sbjct: 509 NGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWK 568
Query: 181 AMVDLYAKCGDVSS---CRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
A++ K G++ + K +E + + + + Y+ R +EA + + M +
Sbjct: 569 AILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRN 628
Query: 238 VKPD 241
+ +
Sbjct: 629 ISKE 632
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/628 (30%), Positives = 314/628 (50%), Gaps = 53/628 (8%)
Query: 111 WNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLA 167
WN +I + G LF M + PDN TF + K C + V H L+
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLS-WTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 168 SKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAV 227
G ++ V +A+V +Y++C +S RK+FD M D W+SII Y + + A+
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 228 HFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTL 286
F M + +PD L + L C + + G Q+H + + + FV + L+ +
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 273
Query: 287 YANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG--QGSSRSMQLLQELH-----RTT 339
YA G + +A +F + KD+V+WN+M+ ++Q+G + + R + +QE T
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 340 SLQIQG--------------------------ATLIAILKSCKNKSDLPAGRQIHSLVMK 373
S I G TLI++L C + L G++IH +K
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 374 SSV-------SHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK--DDSSWSSIIGTYKQN 424
+ +V N L+ MY++C ++ A F + K D +W+ +IG Y Q+
Sbjct: 394 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 425 GMESEALELCKEMLAEGITF--TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH-DV 481
G ++ALEL EM E ++++ + +C+ L A+ +GKQ H +A+++ N +
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 482 YVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKN 541
+V + +IDMYAKCG + D++ VFD + NEV + +++ GY HG ++A+ IF + +
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 542 GVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEE 601
G + VT L +L ACSH+G I+ + F M + + P EHY+CLVD GRAGRL
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNA 633
Query: 602 AYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIE 658
A +++++ E W LS CR H ++GE +A+K+ EL + SY LLSN+Y
Sbjct: 634 ALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYAN 693
Query: 659 EGKWEEARDCREKMAKTGVKKDPGSSWL 686
G+W++ R M GVKK PG SW+
Sbjct: 694 AGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 171/629 (27%), Positives = 296/629 (47%), Gaps = 68/629 (10%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
V W +LI S+ G K LF M + P+ YTF + +AC + G H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFC 125
+ + +G + F G++LV MYS S L DA VF ++ D+V+WN +I +A++G
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRS-LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 126 MVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGE---VMQIHGLASKFGAETDAVVSSAM 182
+ +FS M G +PDN T V++L C++LG Q+H A + V + +
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 183 VDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM--------- 233
VD+YAKCG + +F +M KD W+++++GY+ R E+AV F+ M
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 234 ----------------------CKQR----VKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
C+Q +KP++ L S L C + L G ++H
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 268 MI-------KNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK--DIVAWNSMILAH 318
I KNGH ++ V + L+ +YA + A +F + K D+V W MI +
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 319 AQLGQGSSRSMQLLQEL-HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
+Q G ++++++LL E+ + T+ L +C + + L G+QIH+ +++ +
Sbjct: 451 SQHGD-ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 378 H-PTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKE 436
P V N L+ MY++CG I DA F +++ K++ +W+S++ Y +G EAL + E
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 437 MLAEGITFTSYSLPLCISSCSQLLAINVGKQFH-----VFAIKSGYNHDVYVGSSIIDMY 491
M G +L + + +CS I+ G ++ VF + G H + ++D+
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHY----ACLVDLL 625
Query: 492 AKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQ---AKQAIEIFTMLEKNGVTPNQ 547
+ G + + ++ + ++P V++ A + HG+ + A E T L N
Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASN--HDGS 683
Query: 548 VTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
T L+ L A +AG +D + +LM +K
Sbjct: 684 YTLLSNLYA--NAGRWKDVTRIRSLMRHK 710
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 235/523 (44%), Gaps = 54/523 (10%)
Query: 154 CSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV--WS 211
C T+ +V IH FG T ++S ++ Y G +S + D V W+
Sbjct: 38 CKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 212 SIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
S+I Y N + ++ F M PD + +AC EI + G H +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 272 GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQL 331
G ++ FV + L+ +Y+ L DA K+F + D+V+WNS+I ++A+LG+ ++++
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGK-PKVALEM 215
Query: 332 LQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYS 391
+ + TL+ +L C + G+Q+H + S + VGN LV MY+
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 392 ECGQIGDAFKAFVDIVCKDDSS-----------------------------------WSS 416
+CG + +A F ++ KD S WS+
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAI--- 473
I Y Q G+ EAL +C++ML+ GI +L +S C+ + A+ GK+ H +AI
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 474 ----KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNE---VIYNAMICGYAHHG 526
K+G+ + V + +IDMYAKC ++ ++ +FD+ + P E V + MI GY+ HG
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS-LSPKERDVVTWTVMIGGYSQHG 454
Query: 527 QAKQAIEIFT-MLEKNGVT-PNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESE 584
A +A+E+ + M E++ T PN T L AC+ + + L +
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 585 HYSCLVDAYGRAGRLEEAYQIVQK--DGSESAWRTLLSACRNH 625
+CL+D Y + G + +A + +E W +L++ H
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 140/280 (50%), Gaps = 19/280 (6%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+VVTW+ IS + + G +A + M +PNE T +L CA+ G +IH
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 65 GVLVRSGLERDK-------FAGSSLVYMYSNNGSNLRDACCVFHDL--LERDLVAWNVMI 115
++ ++ K + L+ MY+ + A +F L ERD+V W VMI
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAK-CKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 116 SGFAQVGDFCMVQRLFSEMWEVE-GLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFG 171
G++Q GD L SEM+E + +P+ T L C++L + QIH A +
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR-- 505
Query: 172 AETDAV---VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVH 228
+ +AV VS+ ++D+YAKCG +S R +FD+M K+ W+S+++GY ++ GEEA+
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQM 268
F +M + K D L L AC ++ G++ +M
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRM 605
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 10/229 (4%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMD--ERPNEYTFSVLLRACATPALWNVGL 61
R+VVTWT +I + + G KA +L ++M D RPN +T S L ACA+ A +G
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Query: 62 QIHGVLVRSGLER-DKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
QIH +R+ F + L+ MY+ GS + DA VF +++ ++ V W +++G+
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGS-ISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G +F EM + G K D T + +L CS G + Q + + + FG
Sbjct: 557 HGYGEEALGIFDEMRRI-GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGP 615
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGE 224
+ +VDL + G +++ ++ + M E VW + +S ++ + E
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/547 (29%), Positives = 297/547 (54%), Gaps = 41/547 (7%)
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
+S ++ +Y + +F +++ W S+I +T + +A+ F +M
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA---------- 288
PD +V S L++C + DL G VHG +++ G D + + L+ +YA
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 289 -------------NFG-------------GLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
N G G+ ++F + KD+V++N++I +AQ G
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 323 QGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLV 382
++++++E+ TT L+ TL ++L D+ G++IH V++ + +
Sbjct: 222 MYED-ALRMVREMG-TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 383 GNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGI 442
G++LV MY++ +I D+ + F + C+D SW+S++ Y QNG +EAL L ++M+ +
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 443 TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKK 502
+ + I +C+ L +++GKQ H + ++ G+ ++++ S+++DMY+KCG+++ ++K
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 503 VFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGY 562
+FD +EV + A+I G+A HG +A+ +F +++ GV PNQV F+A+L+ACSH G
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459
Query: 563 IEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLL 619
+++ F M Y + E EHY+ + D GRAG+LEEAY + K + + S W TLL
Sbjct: 460 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLL 519
Query: 620 SACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKK 679
S+C H N ++ EK A+K+ ++ + +Y+L+ N+Y G+W+E R +M K G++K
Sbjct: 520 SSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRK 579
Query: 680 DPGSSWL 686
P SW+
Sbjct: 580 KPACSWI 586
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 195/388 (50%), Gaps = 41/388 (10%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
V+ W ++I KA F +MR P+ F +L++C G +HG
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 66 VLVRSGLERDKFAGSSLVYMY-----------------------SNNG-SNLRDACC--- 98
+VR G++ D + G++L+ MY SN+G +++ C
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 99 --------VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSL 150
VF + +D+V++N +I+G+AQ G + R+ EM + LKPD+ T S+
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD-LKPDSFTLSSV 248
Query: 151 LKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN 207
L S +V+ +IHG + G ++D + S++VD+YAK + ++F + +D
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
W+S+++GY N R EA+ F+ M +VKP SS + AC + L+ G Q+HG
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 268 MIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSR 327
+++ G ++ F+AS L+ +Y+ G ++ A K+F R++ D V+W ++I+ HA G G
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG-HE 427
Query: 328 SMQLLQELHRTTSLQIQGATLIAILKSC 355
++ L +E+ R ++ +A+L +C
Sbjct: 428 AVSLFEEMKR-QGVKPNQVAFVAVLTAC 454
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 247/525 (47%), Gaps = 50/525 (9%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
Q+H +R+ + +S+V N L +A +F L ++AW +I F
Sbjct: 26 QLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVV 178
F F EM G PD+ F S+LK C+ + ++ +HG + G + D
Sbjct: 84 SLFSKALASFVEM-RASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 179 SSAMVDLYAK-----------------------CGD-------------VSSCRKIFDSM 202
+A++++YAK GD + S R++F+ M
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 203 EEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGV 262
KD +++II+GY + E+A+ ++M +KPD LSS L E D+ G
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
++HG +I+ G +D ++ S L+ +YA + D+E++F R+ +D ++WNS++ + Q G
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 323 QGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLV 382
+ + +++L +++ T ++ +++ +C + + L G+Q+H V++ +
Sbjct: 323 R-YNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 383 GNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGI 442
+ALV MYS+CG I A K F + D+ SW++II + +G EA+ L +EM +G+
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 443 TFTSYSLPLCISSCSQL-LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSK 501
+ +++CS + L F+ G N ++ +++ D+ + G +E++
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 502 KVFDAQ-VKPNEVIYNAMICGYAHHGQ----AKQAIEIFTMLEKN 541
V+P +++ ++ + H K A +IFT+ +N
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 151/258 (58%), Gaps = 5/258 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP ++VV++ T+I+ + ++G A ++ +M D +P+ +T S +L + G
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IHG ++R G++ D + GSSLV MY+ + + + D+ VF L RD ++WN +++G+ Q
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKS-ARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
G + RLF +M + +KP F S++ C+ L + Q+HG + G ++
Sbjct: 321 NGRYNEALRLFRQMVTAK-VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
++SA+VD+Y+KCG++ + RKIFD M D W++II G+ ++ G EAV F++M +Q
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 238 VKPDQHVLSSTLRACVEI 255
VKP+Q + L AC +
Sbjct: 440 VKPNQVAFVAVLTACSHV 457
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 191/414 (46%), Gaps = 42/414 (10%)
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRI 303
++ + ++ I+ + Q+H Q I+ + AS+++++Y N L +A LF+ +
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTL 65
Query: 304 DDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPA 363
++AW S+I S+++ E+ R + ++LKSC DL
Sbjct: 66 KSPPVLAWKSVIRCFTDQSL-FSKALASFVEM-RASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 364 GRQIHSLVMKSSVSHPTLVGNALVHMYSECG------QIGDAF----------------- 400
G +H +++ + GNAL++MY++ +G+ F
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 401 -------------KAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSY 447
+ F + KD S+++II Y Q+GM +AL + +EM + S+
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 448 SLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ 507
+L + S+ + + GK+ H + I+ G + DVY+GSS++DMYAK +EDS++VF
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 508 VKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTL 567
+ + +N+++ GY +G+ +A+ +F + V P V F +++ AC+H +
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 568 NLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDG--SESAWRTLL 619
L +L + S LVD Y + G ++ A +I + E +W ++
Sbjct: 364 QLHGYVL-RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R+ ++W +L++ +++ G +A +LF M +P FS ++ ACA A ++G Q+
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
HG ++R G + F S+LV MYS G N++ A +F + D V+W +I G A G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCG-NIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHG----LASKFGAETDAVVS 179
LF EM + +G+KP+ FV++L CS +G V + G + +G +
Sbjct: 425 GHEAVSLFEEM-KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY 483
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
+A+ DL + G + EEA +F MC V+
Sbjct: 484 AAVADLLGRAGKL-------------------------------EEAYNFISKMC---VE 509
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL-TLYANFGGLRDAEK 298
P V S+ L +C ++L +V ++ +N A VL+ +YA+ G ++ K
Sbjct: 510 PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN--MGAYVLMCNMYASNGRWKEMAK 567
Query: 299 LFRRIDDKDI 308
L R+ K +
Sbjct: 568 LRLRMRKKGL 577
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 141/318 (44%), Gaps = 53/318 (16%)
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKS-SVSHPTLVGNALVHMYSECGQIGDAFKAFVD 405
TLI K+KS +Q+H+ +++ S+SH + + ++ +Y+ + +A F
Sbjct: 10 TLIKNPTRIKSKSQ---AKQLHAQFIRTQSLSHTS--ASIVISIYTNLKLLHEALLLFKT 64
Query: 406 IVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG 465
+ +W S+I + + S+AL EM A G P + SC+ ++ + G
Sbjct: 65 LKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 466 KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM----------------------EDSK-- 501
+ H F ++ G + D+Y G+++++MYAK M ED K
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 502 ------------KVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVT 549
+VF+ + + V YN +I GYA G + A+ + + + P+ T
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 550 FLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY--SCLVDAYGRAGRLEEAYQIVQ 607
++L S Y+ D + + Y + +S+ Y S LVD Y ++ R+E++ ++
Sbjct: 245 LSSVLPIFSE--YV-DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 608 ----KDGSESAWRTLLSA 621
+DG +W +L++
Sbjct: 302 RLYCRDG--ISWNSLVAG 317
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 315 bits (807), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 199/636 (31%), Positives = 333/636 (52%), Gaps = 19/636 (2%)
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
H ++ G D + + ++ Y G L A +F ++ +RD V+WN MISG+ G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGF-LGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST-----LGEVMQIHGLASKFGAETDAVV 178
LF+ M + G D +F LLK ++ LGE Q+HGL K G E + V
Sbjct: 82 LEDAWCLFTCM-KRSGSDVDGYSFSRLLKGIASVKRFDLGE--QVHGLVIKGGYECNVYV 138
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM-CKQR 237
S++VD+YAKC V + F + E ++ W+++I+G+ + A M K
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
V D + L + N QVH +++K G Q++ + + +++ YA+ G + DA+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 298 KLFRRID-DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
++F + KD+++WNSMI ++ + + +L ++ R ++ T +L +C
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSK-HELKESAFELFIQMQRHW-VETDIYTYTGLLSACS 316
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSE--CGQIGDAFKAFVDIVCKDDSSW 414
+ G+ +H +V+K + T NAL+ MY + G + DA F + KD SW
Sbjct: 317 GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISW 376
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+SII + Q G+ +A++ + + I Y+ + SCS L + +G+Q H A K
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVKPNEVIYNAMICGYAHHGQAKQAIE 533
SG+ + +V SS+I MY+KCG +E ++K F K + V +NAMI GYA HG + +++
Sbjct: 437 SGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLD 496
Query: 534 IFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAY 593
+F+ + V + VTF A+L+ACSH G I++ L L LM YKI+P EHY+ VD
Sbjct: 497 LFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLL 556
Query: 594 GRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYI 650
GRAG + +A ++++ + +T L CR ++ + A ++E+ P DH +Y+
Sbjct: 557 GRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYV 616
Query: 651 LLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
LS++Y + KWEE ++ M + GVKK PG SW+
Sbjct: 617 SLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/535 (28%), Positives = 271/535 (50%), Gaps = 26/535 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+ V+W T+IS + G + A+ LF M+ + Y+FS LL+ A+ +++G
Sbjct: 61 MPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG 120
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+HG++++ G E + + GSSLV MY+ + DA F ++ E + V+WN +I+GF Q
Sbjct: 121 EQVHGLVIKGGYECNVYVGSSLVDMYA-KCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC------CSTLGEVMQIHGLASKFGAET 174
V D L M + D TF LL C+ L Q+H K G +
Sbjct: 180 VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK---QVHAKVLKLGLQH 236
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSM-EEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ + +AM+ YA CG VS +++FD + KD W+S+I+G++ + E A F M
Sbjct: 237 EITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM 296
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF--G 291
+ V+ D + + L AC E G +HG +IK G + + L+++Y F G
Sbjct: 297 QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTG 356
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
+ DA LF + KD+++WNS+I AQ G S +++ L R++ +++ A+
Sbjct: 357 TMEDALSLFESLKSKDLISWNSIITGFAQKGL-SEDAVKFFSYL-RSSEIKVDDYAFSAL 414
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
L+SC + + L G+QIH+L KS V ++L+ MYS+CG I A K F I K
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 474
Query: 412 S-SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF-- 468
+ +W+++I Y Q+G+ +L+L +M + + + +++CS I G +
Sbjct: 475 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 534
Query: 469 ---HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMI 519
V+ I+ H ++ +D+ + G + +K++ ++ + P+ ++ +
Sbjct: 535 LMEPVYKIQPRMEH----YAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFL 585
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 316/599 (52%), Gaps = 13/599 (2%)
Query: 93 LRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK 152
+ DA +F ++ + D WNVMI GF G + + +S M G+K D T+ ++K
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKADTFTYPFVIK 138
Query: 153 CC---STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
S+L E +IH + K G +D V ++++ LY K G K+F+ M E+D
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
W+S+ISGY G ++ FK+M K KPD+ S L AC + G ++H +
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 270 KNG-HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRS 328
++ D V + +L +Y+ +G + AE++F + ++IVAWN MI +A+ G+ + +
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTD-A 317
Query: 329 MQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVH 388
Q++ LQ T I +L + S + GR IH M+ ++ AL+
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALID 373
Query: 389 MYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYS 448
MY ECGQ+ A F + K+ SW+SII Y QNG ALEL +E+ + S +
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 449 LPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQV 508
+ + + ++ L+++ G++ H + +KS Y + + +S++ MYA CG +ED++K F+ +
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 509 KPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLN 568
+ V +N++I YA HG + ++ +F+ + + V PN+ TF ++L+ACS +G +++
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
Query: 569 LFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNH 625
F M +Y I P EHY C++D GR G A + +++ + W +LL+A RNH
Sbjct: 554 YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNH 613
Query: 626 NNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+ I E +A+++ ++ + Y+LL N+Y E G+WE+ + M G+ + S
Sbjct: 614 KDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRS 672
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 164/589 (27%), Positives = 295/589 (50%), Gaps = 34/589 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M + W +I G +A Q ++ M + + +T+ ++++ A + G
Sbjct: 90 MNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEG 149
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IH ++++ G D + +SL+ +Y G DA VF ++ ERD+V+WN MISG+
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW-DAEKVFEEMPERDIVSWNSMISGYLA 208
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS-----TLGEVMQIHGLASKFGAET- 174
+GD LF EM + G KPD + +S L CS +G+ + H + S+ ET
Sbjct: 209 LGDGFSSLMLFKEMLKC-GFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI--ETG 265
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
D +V ++++D+Y+K G+VS +IF+ M +++ W+ +I Y N R +A F+ M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 235 KQR-VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
+Q ++PD + L A +E G +HG ++ G + + L+ +Y G L
Sbjct: 326 EQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQL 381
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
+ AE +F R+ +K++++WNS+I A+ Q G+ S +++L QEL +SL T+ +IL
Sbjct: 382 KSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS-ALELFQELW-DSSLVPDSTTIASILP 439
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
+ L GR+IH+ ++KS T++ N+LVHMY+ CG + DA K F I+ KD S
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 414 WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF----- 468
W+SII Y +G ++ L EM+A + + +++CS ++ G ++
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Query: 469 HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQ 527
+ I G H ++D+ + G+ +K+ + P I+ +++ +H
Sbjct: 560 REYGIDPGIEHY----GCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
Query: 528 ---AKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
A+ A E +E + N ++ +L+ + AG ED + LM
Sbjct: 616 ITIAEFAAEQIFKMEHD----NTGCYVLLLNMYAEAGRWEDVNRIKLLM 660
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 138/313 (44%), Gaps = 43/313 (13%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M +NV++W ++I+++++ G A +LF ++ P+ T + +L A A + G
Sbjct: 391 MAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEG 450
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IH +V+S + +SLV+MY+ G +L DA F+ +L +D+V+WN +I +A
Sbjct: 451 REIHAYIVKSRYWSNTIILNSLVHMYAMCG-DLEDARKCFNHILLKDVVSWNSIIMAYAV 509
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G + LFSEM + P+ TF SLL CS G V + + ++G +
Sbjct: 510 HGFGRISVWLFSEMI-ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 568
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
M+DL + G+ S+ ++ + M FV
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKRFLEEMP----FV--------------------------- 597
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQND-CFVASVLLTLYANFGGLRD 295
P + S L A +D+ Q+ K H N C+V +LL +YA G D
Sbjct: 598 ---PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYV--LLLNMYAEAGRWED 652
Query: 296 AEKLFRRIDDKDI 308
++ ++ K I
Sbjct: 653 VNRIKLLMESKGI 665
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/600 (29%), Positives = 312/600 (52%), Gaps = 19/600 (3%)
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLK--PDNRTFVSLLKCCST 156
+F ++ + L+++N++I + + G + +F M EG+K PD T+ + K
Sbjct: 71 LFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVS-EGVKCVPDGYTYPFVAKAAGE 129
Query: 157 LGEV---MQIHG--LASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWS 211
L + + +HG L S FG D V +A++ +Y G V R +FD M+ +D W+
Sbjct: 130 LKSMKLGLVVHGRILRSWFG--RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWN 187
Query: 212 SIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
++ISGY N +A+ F M + V D + S L C ++DL G VH + +
Sbjct: 188 TMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEK 247
Query: 272 GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQL 331
+ V + L+ +Y G + +A +F R++ +D++ W MI + + G +
Sbjct: 248 RLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE--DGDVENALE 305
Query: 332 LQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYS 391
L L + ++ T+ +++ C + + G+ +H ++ V ++ +L+ MY+
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYA 365
Query: 392 ECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL 451
+C ++ F+ F WS+II QN + S+AL L K M E + +L
Sbjct: 366 KCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNS 425
Query: 452 CISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPN 511
+ + + L + H + K+G+ + + ++ +Y+KCG +E + K+F+ + +
Sbjct: 426 LLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 512 E----VIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTL 567
+ V++ A+I GY HG A+++F + ++GVTPN++TF + L+ACSH+G +E+ L
Sbjct: 486 KSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGL 545
Query: 568 NLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRN 624
LF ML YK S HY+C+VD GRAGRL+EAY ++ + + + W LL+AC
Sbjct: 546 TLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVT 605
Query: 625 HNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
H N ++GE +A K+ EL P + +Y+LL+NIY G+W++ R M G++K PG S
Sbjct: 606 HENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHS 665
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 218/437 (49%), Gaps = 5/437 (1%)
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFF 230
G + S + YA CG ++ RK+F+ M + ++ +I Y +A+ F
Sbjct: 44 GGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVF 103
Query: 231 KDMCKQRVK--PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
M + VK PD + +A E++ + G+ VHG+++++ D +V + LL +Y
Sbjct: 104 IRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYM 163
Query: 289 NFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATL 348
NFG + A +F + ++D+++WN+MI + + G + M + S+ + AT+
Sbjct: 164 NFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMF--DWMVNESVDLDHATI 221
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
+++L C + DL GR +H LV + + V NALV+MY +CG++ +A F +
Sbjct: 222 VSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMER 281
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF 468
+D +W+ +I Y ++G ALELC+ M EG+ + ++ +S C L +N GK
Sbjct: 282 RDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL 341
Query: 469 HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQA 528
H +A++ D+ + +S+I MYAKC ++ +VF K + ++A+I G +
Sbjct: 342 HGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELV 401
Query: 529 KQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSC 588
A+ +F + + V PN T ++L A + + +N+ L K + +
Sbjct: 402 SDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY-LTKTGFMSSLDAATG 460
Query: 589 LVDAYGRAGRLEEAYQI 605
LV Y + G LE A++I
Sbjct: 461 LVHVYSKCGTLESAHKI 477
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 136/543 (25%), Positives = 256/543 (47%), Gaps = 29/543 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER----PNEYTFSVLLRACATPAL 56
MP +++++ +I ++R G A +F +R++ E P+ YT+ + +A
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVF--IRMVSEGVKCVPDGYTYPFVAKAAGELKS 132
Query: 57 WNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMIS 116
+GL +HG ++RS RDK+ ++L+ MY N G + A VF + RD+++WN MIS
Sbjct: 133 MKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFG-KVEMARDVFDVMKNRDVISWNTMIS 191
Query: 117 GFAQVGDFCMVQRLFSEMWEV-EGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGA 172
G+ + G +F W V E + D+ T VS+L C L ++ +H L +
Sbjct: 192 GYYRNGYMNDALMMFD--WMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKD 232
V +A+V++Y KCG + R +FD ME +D W+ +I+GYT + E A+ +
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGG 292
M + V+P+ ++S + C + +N G +HG ++ +D + + L+++YA
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 293 LRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAIL 352
+ ++F W+++I Q + S ++ L + + R ++ ATL ++L
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQ-NELVSDALGLFKRMRR-EDVEPNIATLNSLL 427
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI----VC 408
+ +DL IH + K+ LVH+YS+CG + A K F I
Sbjct: 428 PAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF 468
KD W ++I Y +G AL++ EM+ G+T + +++CS + G
Sbjct: 488 KDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
Query: 469 HVFAIK-----SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVKPNEVIYNAMICGY 522
F ++ + NH + I+D+ + G ++++ + +P ++ A++
Sbjct: 548 FRFMLEHYKTLARSNHY----TCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAAC 603
Query: 523 AHH 525
H
Sbjct: 604 VTH 606
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 168/535 (31%), Positives = 296/535 (55%), Gaps = 13/535 (2%)
Query: 162 QIHGLASKFGAETDAV-VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVN 220
QIHG + G D+ +++V++YAKCG + +F E+D F ++++ISG+ VN
Sbjct: 81 QIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVN 139
Query: 221 NRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA 280
+A+ +++M + PD++ S L+ +E L+ +VHG K G +DC+V
Sbjct: 140 GSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKKVHGLAFKLGFDSDCYVG 198
Query: 281 SVLLTLYANFGGLRDAEKLFRRIDDKD-IVAWNSMILAHAQLGQGSSRSMQLLQELHRTT 339
S L+T Y+ F + DA+K+F + D+D V WN+++ ++Q+ + L+ R
Sbjct: 199 SGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR--FEDALLVFSKMREE 256
Query: 340 SLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDA 399
+ + T+ ++L + D+ GR IH L +K+ +V NAL+ MY + + +A
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEA 316
Query: 400 FKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQL 459
F + +D +W+S++ + G L L + ML GI +L + +C +L
Sbjct: 317 NSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRL 376
Query: 460 LAINVGKQFHVFAIKSGY----NHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIY 515
++ G++ H + I SG + + ++ +S++DMY KCG + D++ VFD+ + +
Sbjct: 377 ASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASW 436
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY 575
N MI GY + A+++F+ + + GV P+++TF+ +L ACSH+G++ + N M
Sbjct: 437 NIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMET 496
Query: 576 KYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKD---GSESAWRTLLSACRNHNNTKIGE 632
Y I P S+HY+C++D GRA +LEEAY++ + WR++LS+CR H N +
Sbjct: 497 VYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Query: 633 KSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWLI 687
+ K++ EL P Y+L+SN+Y+E GK+EE D R+ M + VKK PG SW++
Sbjct: 557 VAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIV 611
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 259/519 (49%), Gaps = 31/519 (5%)
Query: 35 MDERPNEY------TFSVLLRACATPALWNVGLQIHGVLVRSG-LERDKFAGSSLVYMYS 87
++E P Y T L+ CA + G QIHG +VR G L+ AG+SLV MY+
Sbjct: 48 IEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYA 107
Query: 88 NNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTF 147
G +R A VF ERD+ +N +ISGF G + EM G+ PD TF
Sbjct: 108 KCGL-MRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREM-RANGILPDKYTF 164
Query: 148 VSLLKCCST--LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
SLLK L +V ++HGLA K G ++D V S +V Y+K V +K+FD + ++
Sbjct: 165 PSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDR 224
Query: 206 DNFV-WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
D+ V W+++++GY+ R E+A+ F M ++ V +H ++S L A D++ G +
Sbjct: 225 DDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSI 284
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
HG +K G +D V++ L+ +Y L +A +F +D++D+ WNS++ H G
Sbjct: 285 HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDH 344
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSV----SHPT 380
++ L + + + ++ TL +L +C + L GR+IH ++ S + S
Sbjct: 345 DG-TLALFERM-LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNE 402
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
+ N+L+ MY +CG + DA F + KD +SW+ +I Y AL++ M
Sbjct: 403 FIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRA 462
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN----HDVYVGSSIIDMYAKCGH 496
G+ + + +CS +N G+ F + +++ YN D Y + +IDM +
Sbjct: 463 GVKPDEITFVGLLQACSHSGFLNEGRNF-LAQMETVYNILPTSDHY--ACVIDMLGRADK 519
Query: 497 MEDSKKVFDAQVKP---NEVIYNAMICGYAHHGQAKQAI 532
+E++ ++ A KP N V++ +++ HG A+
Sbjct: 520 LEEAYEL--AISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 222/444 (50%), Gaps = 15/444 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R+V + LIS + GS A + + +MR P++YTF LL+ L +V ++
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK-KV 182
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER-DLVAWNVMISGFAQVG 122
HG+ + G + D + GS LV YS S + DA VF +L +R D V WN +++G++Q+
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMS-VEDAQKVFDELPDRDDSVLWNALVNGYSQIF 241
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVS 179
F +FS+M E EG+ T S+L + G++ IHGLA K G+ +D VVS
Sbjct: 242 RFEDALLVFSKMRE-EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
+A++D+Y K + IF++M+E+D F W+S++ + + + F+ M ++
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQN----DCFVASVLLTLYANFGGLRD 295
PD L++ L C + L G ++HG MI +G N + F+ + L+ +Y G LRD
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A +F + KD +WN MI + G ++ + + R ++ T + +L++C
Sbjct: 421 ARMVFDSMRVKDSASWNIMINGYGVQSCG-ELALDMFSCMCR-AGVKPDEITFVGLLQAC 478
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFK-AFVDIVCKDDSS 413
+ L GR + + PT A ++ M ++ +A++ A +C +
Sbjct: 479 SHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVV 538
Query: 414 WSSIIGTYKQNGMESEALELCKEM 437
W SI+ + + +G + AL K +
Sbjct: 539 WRSILSSCRLHGNKDLALVAGKRL 562
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 162/314 (51%), Gaps = 20/314 (6%)
Query: 332 LQELHRTTSLQIQG----------ATLIAILKSCKNKSDLPAGRQIHS-LVMKSSVSHPT 380
L L+ T S QI+ AT IA L+ C + D +G+QIH +V K +
Sbjct: 37 LASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSP 96
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
G +LV+MY++CG + A F +D ++++I + NG +A+E +EM A
Sbjct: 97 RAGTSLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRAN 155
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
GI Y+ P + S + ++ K+ H A K G++ D YVGS ++ Y+K +ED+
Sbjct: 156 GILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDA 214
Query: 501 KKVFDA-QVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSH 559
+KVFD + + V++NA++ GY+ + + A+ +F+ + + GV ++ T ++LSA +
Sbjct: 215 QKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTV 274
Query: 560 AGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES--AWRT 617
+G I++ ++ L + K + + L+D YG++ LEEA I + W +
Sbjct: 275 SGDIDNGRSIHGLAV-KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNS 333
Query: 618 LLSA---CRNHNNT 628
+L C +H+ T
Sbjct: 334 VLCVHDYCGDHDGT 347
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R++ TW +++ H G LF M RP+ T + +L C A G
Sbjct: 323 MDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Query: 61 LQIHGVLVRSGL----ERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMIS 116
+IHG ++ SGL ++F +SL+ MY G +LRDA VF + +D +WN+MI+
Sbjct: 383 REIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCG-DLRDARMVFDSMRVKDSASWNIMIN 441
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDA 176
G+ + +FS M G+KPD TFV LL+ CS G + + ++ +
Sbjct: 442 GYGVQSCGELALDMFSCMCRA-GVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNI 500
Query: 177 VVSS----AMVDLYAKCGDVSSCRKIFDSMEEKDN-FVWSSIIS 215
+ +S ++D+ + + ++ S DN VW SI+S
Sbjct: 501 LPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILS 544
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 293/517 (56%), Gaps = 9/517 (1%)
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
++++ ++ Y + G V R +FD M ++D W+++I+GY +N A F +M KQ
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
P++ LSS L++C ++ L G VHG ++K G + +V + ++ +YA +A
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 297 EKL-FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
L FR I K+ V W ++I LG G +++ +++ + IA+ S
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIG-GLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
S + G+QIH+ V+K V N+++ +Y CG + +A F ++ KD +W+
Sbjct: 225 SIDS-VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS 475
++I +++ SEAL + + ++G Y+ +++C+ + A+N G+Q H +
Sbjct: 284 TLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQV-KPNEVIYNAMICGYAHHGQAKQAIEI 534
G+N +V + +++IDMYAKCG++ DS++VF V + N V + +M+ GY HG +A+E+
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
F + +G+ P+++ F+A+LSAC HAG +E L F +M +Y I P+ + Y+C+VD G
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 595 RAGRLEEAYQIVQK---DGSESAWRTLLSACRNH-NNTKIGEKSAKKMIELNPSDHASYI 650
RAG++ EAY++V++ ES W +L AC+ H +N I +A+K++EL P +Y+
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 651 LLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWLI 687
+LS IY EGKW + R+ M G KK+ G SW++
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWIL 559
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 236/437 (54%), Gaps = 13/437 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+VV WT +I+ + + +A++ F++M PNE+T S +L++C + G
Sbjct: 71 MPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYG 130
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+HGV+V+ G+E + ++++ MY+ + AC +F D+ ++ V W +I+GF
Sbjct: 131 ALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTH 190
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAV 177
+GD +++ +M +E + ++ +++ V QIH K G +++
Sbjct: 191 LGDGIGGLKMYKQML-LENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLP 249
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V ++++DLY +CG +S + F ME+KD W+++IS ++ EA+ F+ Q
Sbjct: 250 VMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQG 308
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
P+ + +S + AC I LN G Q+HG++ + G + +A+ L+ +YA G + D++
Sbjct: 309 FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQ 368
Query: 298 KLFRRI-DDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
++F I D +++V+W SM++ + G G + +++L ++ ++ ++ +A+L +C+
Sbjct: 369 RVFGEIVDRRNLVSWTSMMIGYGSHGYG-AEAVELFDKM-VSSGIRPDRIVFMAVLSACR 426
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTL-VGNALVHMYSECGQIGDAFKAFVDIVCK-DDSSW 414
+ + G + +++ +P + N +V + G+IG+A++ + K D+S+W
Sbjct: 427 HAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTW 486
Query: 415 SSIIG---TYKQNGMES 428
+I+G +K NG+ S
Sbjct: 487 GAILGACKAHKHNGLIS 503
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 233/454 (51%), Gaps = 12/454 (2%)
Query: 79 GSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVE 138
++L+ Y G + +A +F ++ +RD+VAW MI+G+A F EM + +
Sbjct: 48 ATNLIVSYFEKGL-VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK-Q 105
Query: 139 GLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCG-DVSS 194
G P+ T S+LK C L +HG+ K G E V +AM+++YA C + +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 195 CRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVE 254
IF ++ K++ W+++I+G+T G + +K M + + + ++ +RA
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSM 314
I+ + TG Q+H +IK G Q++ V + +L LY G L +A+ F ++DKD++ WN++
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 315 ILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS 374
I ++L + S L+ + + T +++ +C N + L G+Q+H + +
Sbjct: 286 I---SELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD-SSWSSIIGTYKQNGMESEALEL 433
+ + NAL+ MY++CG I D+ + F +IV + + SW+S++ Y +G +EA+EL
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQFHVFAIKSGYNHDVYVGSSIIDMYA 492
+M++ GI +S+C + G K F+V + G N D + + ++D+
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 493 KCGHMEDSKKVFD-AQVKPNEVIYNAMICGYAHH 525
+ G + ++ ++ + KP+E + A++ H
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 308 bits (790), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 273/496 (55%), Gaps = 12/496 (2%)
Query: 202 MEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
+++ D F W+S+I+ + EA+ F M K + P + ++AC + D+ +G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQL 321
Q H Q G+Q+D FV+S L+ +Y+ G L DA K+F I ++IV+W SMI + L
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY-DL 154
Query: 322 GQGSSRSMQLLQEL-----HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSV 376
+ ++ L ++L ++ + L++++ +C IHS V+K
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 377 SHPTLVGNALVHMYSECGQIGDAF--KAFVDIVCKDDSSWSSIIGTYKQNGMESEALELC 434
VGN L+ Y++ G+ G A K F IV KD S++SI+ Y Q+GM +EA E+
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 435 KEMLAEGI-TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
+ ++ + TF + +L + + S A+ +GK H I+ G DV VG+SIIDMY K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 494 CGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAM 553
CG +E ++K FD N + AMI GY HG A +A+E+F + +GV PN +TF+++
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 554 LSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DG 610
L+ACSHAG + F M ++ ++P EHY C+VD GRAG L++AY ++Q+
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454
Query: 611 SESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCRE 670
W +LL+ACR H N ++ E S ++ EL+ S+ Y+LLS+IY + G+W++ R
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514
Query: 671 KMAKTGVKKDPGSSWL 686
M G+ K PG S L
Sbjct: 515 IMKNRGLVKPPGFSLL 530
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 241/493 (48%), Gaps = 26/493 (5%)
Query: 107 DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QI 163
D+ +WN +I+ A+ GD FS M ++ L P +F +K CS+L ++ Q
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLS-LYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 164 HGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRG 223
H A FG ++D VSSA++ +Y+ CG + RK+FD + +++ W+S+I GY +N
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 224 EEAVHFFKDMCKQRVKPDQHV------LSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDC 277
+AV FKD+ D + L S + AC + +H +IK G
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 278 FVASVLLTLYANF--GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQEL 335
V + LL YA GG+ A K+F +I DKD V++NS++ +AQ G S+ + ++ + L
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM-SNEAFEVFRRL 277
Query: 336 HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQ 395
+ + TL +L + + L G+ IH V++ + +VG +++ MY +CG+
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 396 IGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS 455
+ A KAF + K+ SW+++I Y +G ++ALEL M+ G+ + +++
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Query: 456 CSQL-LAINVGKQFHV----FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD-AQVK 509
CS L + + F+ F ++ G H ++D+ + G ++ + + ++K
Sbjct: 398 CSHAGLHVEGWRWFNAMKGRFGVEPGLEH----YGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 510 PNEVIYNAMICGYAHHGQAKQA-IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLN 568
P+ +I+++++ H + A I + + E + L+ + A AG +D
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA--DAGRWKDVER 511
Query: 569 LFTLMLYKYKIKP 581
+ +M + +KP
Sbjct: 512 VRMIMKNRGLVKP 524
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 181/362 (50%), Gaps = 14/362 (3%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V +W ++I+ R+G +A F+ MR + P +F ++AC++ G Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
G + D F S+L+ MYS G L DA VF ++ +R++V+W MI G+ G+
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCG-KLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 125 CMVQRLFSEMW-----EVEGLKPDNRTFVSLLKCCSTL---GEVMQIHGLASKFGAETDA 176
LF ++ + + + D+ VS++ CS + G IH K G +
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 177 VVSSAMVDLYAKCGD--VSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
V + ++D YAK G+ V+ RKIFD + +KD ++SI+S Y + EA F+ +
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 235 KQRVKPDQHV-LSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
K +V + LS+ L A L G +H Q+I+ G ++D V + ++ +Y G +
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
A K F R+ +K++ +W +MI + G ++++++L + + ++ T +++L
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGH-AAKALELFPAM-IDSGVRPNYITFVSVLA 396
Query: 354 SC 355
+C
Sbjct: 397 AC 398
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 181/358 (50%), Gaps = 22/358 (6%)
Query: 299 LFRR-IDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
LF R +D D+ +WNS+I A+ G S L R SL ++ +K+C +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLAR--SGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSS 88
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
D+ +G+Q H V +AL+ MYS CG++ DA K F +I ++ SW+S+
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 418 IGTYKQNGMESEALELCKEMLA------EGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
I Y NG +A+ L K++L + + S L IS+CS++ A + + H F
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGH--MEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAK 529
IK G++ V VG++++D YAK G + ++K+FD V + V YN+++ YA G +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 530 QAIEIFTMLEKNG-VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSC 588
+A E+F L KN VT N +T +L A SH+G + + ++ + ++ + +
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI-RMGLEDDVIVGTS 327
Query: 589 LVDAYGRAGRLEEAYQIVQ--KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPS 644
++D Y + GR+E A + K+ + +W +++ H + A K +EL P+
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH-------AAKALELFPA 378
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 160/334 (47%), Gaps = 22/334 (6%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTF------SVLLRACATP 54
+P RN+V+WT++I + G+ A LF D+ V + ++ F ++ AC+
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 55 ALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNG-SNLRDACCVFHDLLERDLVAWNV 113
+ IH +++ G +R G++L+ Y+ G + A +F ++++D V++N
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 114 MISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKF 170
++S +AQ G +F + + + + + T ++L S G + IH +
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFF 230
G E D +V ++++D+Y KCG V + RK FD M+ K+ W+++I+GY ++ +A+ F
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL------L 284
M V+P+ S L AC + G+ V G N + V L +
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACS-----HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMV 431
Query: 285 TLYANFGGLRDAEKLFRRIDDK-DIVAWNSMILA 317
L G L+ A L +R+ K D + W+S++ A
Sbjct: 432 DLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 168/547 (30%), Positives = 292/547 (53%), Gaps = 14/547 (2%)
Query: 145 RTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE 204
R F+ LLK C ++ ++ QI E + V+L GD + +F EE
Sbjct: 38 RDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVTEE 93
Query: 205 KDNFVWSSIISGYTVN-NRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
+++ ++ +I G T N E A+ ++ M +KPD+ + AC ++E++ G
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ 323
VH + K G + D + L+ +YA G + A KLF I ++D V+WNSMI +++ G
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 324 GSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG 383
+M L +++ + TL+++L +C + DL GR + + + + T +G
Sbjct: 214 AKD-AMDLFRKMEEE-GFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLG 271
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT 443
+ L+ MY +CG + A + F ++ KD +W+++I Y QNG SEA +L EM G++
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 444 FTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
+ +L +S+C + A+ +GKQ A + H++YV + ++DMY KCG +E++ +V
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 504 FDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI 563
F+A NE +NAMI YAH G AK+A+ +F ++ V P+ +TF+ +LSAC HAG +
Sbjct: 392 FEAMPVKNEATWNAMITAYAHQGHAKEALLLF---DRMSVPPSDITFIGVLSACVHAGLV 448
Query: 564 EDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLS 620
F M + + P+ EHY+ ++D RAG L+EA++ +++ E +L
Sbjct: 449 HQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILG 508
Query: 621 ACRNHNNTKIGEKSAKKMIELNPSDHA-SYILLSNIYIEEGKWEEARDCREKMAKTGVKK 679
AC + I EK+ + ++E+ + +A +Y++ SN+ + W+E+ R M GV K
Sbjct: 509 ACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVK 568
Query: 680 DPGSSWL 686
PG SW+
Sbjct: 569 TPGCSWI 575
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 216/427 (50%), Gaps = 27/427 (6%)
Query: 25 AFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVY 84
A L+ M+ +P+++T++ + ACA VG +H L + GLERD SL+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 85 MYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDN 144
MY+ G + A +F ++ ERD V+WN MISG+++ G LF +M E EG +PD
Sbjct: 176 MYAKCG-QVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM-EEEGFEPDE 233
Query: 145 RTFVSLLKCCSTLGE-----VMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIF 199
RT VS+L CS LG+ +++ + K G T + S ++ +Y KCGD+ S R++F
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST--FLGSKLISMYGKCGDLDSARRVF 291
Query: 200 DSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLN 259
+ M +KD W+++I+ Y+ N + EA F +M K V PD LS+ L AC + L
Sbjct: 292 NQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALE 351
Query: 260 TGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHA 319
G Q+ + Q++ +VA+ L+ +Y G + +A ++F + K+ WN+MI A+A
Sbjct: 352 LGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYA 411
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG-RQIHSLV----MKS 374
QG ++ LL + S+ T I +L +C + + G R H + +
Sbjct: 412 H--QGHAKEALLLFD---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVP 466
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK-DDSSWSSIIGT---YKQNGMESEA 430
+ H T ++ + S G + +A++ K D+ ++I+G K + +A
Sbjct: 467 KIEHYT----NIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKA 522
Query: 431 LELCKEM 437
+ + EM
Sbjct: 523 MRMLMEM 529
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 8/268 (2%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R+ V+W ++IS + AG A LF M P+E T +L AC+ G +
Sbjct: 196 RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
+ + + F GS L+ MY G +L A VF+ ++++D VAW MI+ ++Q G
Sbjct: 256 EEMAITKKIGLSTFLGSKLISMYGKCG-DLDSARRVFNQMIKKDRVAWTAMITVYSQNGK 314
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSS 180
+LF EM E G+ PD T ++L C ++G + QI AS+ + + V++
Sbjct: 315 SSEAFKLFFEM-EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVAT 373
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
+VD+Y KCG V ++F++M K+ W+++I+ Y +EA+ F M V P
Sbjct: 374 GLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPP 430
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQM 268
L ACV ++ G + +M
Sbjct: 431 SDITFIGVLSACVHAGLVHQGCRYFHEM 458
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 14/265 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M ++ V WT +I+ + + G +AF+LF +M P+ T S +L AC + +G
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
QI L+ + + + LV MY G + +A VF + ++ WN MI+ +A
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCG-RVEEALRVFEAMPVKNEATWNAMITAYAH 412
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G LF M + P + TF+ +L C G V Q H ++S FG
Sbjct: 413 QGHAKEALLLFDRM----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKI 468
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRG----EEAVHFFKD 232
+ ++DL ++ G + + + K + + + I G + E+A+ +
Sbjct: 469 EHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLME 528
Query: 233 MCKQRVKPDQHVLSSTLRACVEIED 257
M K+ +V+SS + A +++ D
Sbjct: 529 M-KEAKNAGNYVISSNVLADMKMWD 552
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 284/535 (53%), Gaps = 36/535 (6%)
Query: 186 YAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ-RVKPDQHV 244
Y+K G +S F+ + ++D W+ +I GY+++ AV + M + +
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 245 LSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRID 304
L + L+ ++ G Q+HGQ+IK G ++ V S LL +YAN G + DA+K+F +D
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 305 D------------------------------KDIVAWNSMILAHAQLGQGSSRSMQLLQE 334
D KD V+W +MI AQ G + +++ +E
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL-AKEAIECFRE 260
Query: 335 LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECG 394
+ + L++ ++L +C + G+QIH+ +++++ VG+AL+ MY +C
Sbjct: 261 M-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 395 QIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCIS 454
+ A F + K+ SW++++ Y Q G EA+++ +M GI Y+L IS
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 455 SCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVI 514
+C+ + ++ G QFH AI SG H V V +S++ +Y KCG ++DS ++F+ + V
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS 439
Query: 515 YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLML 574
+ AM+ YA G+A + I++F + ++G+ P+ VT ++SACS AG +E F LM
Sbjct: 440 WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMT 499
Query: 575 YKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIG 631
+Y I P HYSC++D + R+GRLEEA + + W TLLSACRN N +IG
Sbjct: 500 SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559
Query: 632 EKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ +A+ +IEL+P A Y LLS+IY +GKW+ R M + VKK+PG SW+
Sbjct: 560 KWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 224/461 (48%), Gaps = 40/461 (8%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNV 59
+P R+ VTW LI + +G V A + +N M R T +L+ ++ ++
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL---------------- 103
G QIHG +++ G E GS L+YMY+N G + DA VF+ L
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGC-ISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 104 --------------LERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVS 149
+E+D V+W MI G AQ G F EM +V+GLK D F S
Sbjct: 217 ACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGS 275
Query: 150 LLKCCSTLG---EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD 206
+L C LG E QIH + + V SA++D+Y KC + + +FD M++K+
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHG 266
W++++ GY R EEAV F DM + + PD + L + AC + L G Q HG
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 267 QMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSS 326
+ I +G + V++ L+TLY G + D+ +LF ++ +D V+W +M+ A+AQ G+ +
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR-AV 454
Query: 327 RSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NA 385
++QL ++ + L+ G TL ++ +C + G++ L+ P++ +
Sbjct: 455 ETIQLFDKMVQ-HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 386 LVHMYSECGQIGDAFKAFVDIVCKDDS-SWSSIIGTYKQNG 425
++ ++S G++ +A + + D+ W++++ + G
Sbjct: 514 MIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 231/472 (48%), Gaps = 37/472 (7%)
Query: 77 FAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWE 136
F+ ++L+ YS G + + F L +RD V WNV+I G++ G + ++ M
Sbjct: 73 FSWNNLLLAYSKAGL-ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 137 VEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVS 193
T +++LK S+ G V QIHG K G E+ +V S ++ +YA G +S
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 194 SCRKIFDSME------------------------------EKDNFVWSSIISGYTVNNRG 223
+K+F ++ EKD+ W+++I G N
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLA 251
Query: 224 EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL 283
+EA+ F++M Q +K DQ+ S L AC + +N G Q+H +I+ Q+ +V S L
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 284 LTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI 343
+ +Y L A+ +F R+ K++V+W +M++ + Q G+ + ++++ ++ R + +
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGR-AEEAVKIFLDMQR-SGIDP 369
Query: 344 QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF 403
TL + +C N S L G Q H + S + H V N+LV +Y +CG I D+ + F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 404 VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
++ +D SW++++ Y Q G E ++L +M+ G+ +L IS+CS+ +
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 464 VGKQ-FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVI 514
G++ F + + G + S +ID++++ G +E++ + + P + I
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAI 541
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 200/441 (45%), Gaps = 72/441 (16%)
Query: 274 QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQ 333
Q + F + LL Y+ G + + E F ++ D+D V WN +I ++ G + +++
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGA-AVKAYN 127
Query: 334 ELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSEC 393
+ R S + TL+ +LK + + G+QIH V+K LVG+ L++MY+
Sbjct: 128 TMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV 187
Query: 394 GQIGDAFKAFVD----------------IVC--------------KDDSSWSSIIGTYKQ 423
G I DA K F + C KD SW+++I Q
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQ 247
Query: 424 NGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYV 483
NG+ EA+E +EM +G+ Y + +C L AIN GKQ H I++ + +YV
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYV 307
Query: 484 GSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGV 543
GS++IDMY KC + +K VFD + N V + AM+ GY G+A++A++IF ++++G+
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Query: 544 TPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY----SCLVDAYGRAGRL 599
P+ T +SAC++ +E+ + I HY + LV YG+ G +
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQ-----FHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 600 EEAYQIVQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEE 659
+++ ++ E+N D S+ + + Y +
Sbjct: 423 DDSTRLFN--------------------------------EMNVRDAVSWTAMVSAYAQF 450
Query: 660 GKWEEARDCREKMAKTGVKKD 680
G+ E +KM + G+K D
Sbjct: 451 GRAVETIQLFDKMVQHGLKPD 471
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 170/574 (29%), Positives = 302/574 (52%), Gaps = 23/574 (4%)
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGE-VMQIHGLASKFGAETDA 176
Q FCM+ R L P F L+ S L + QIH G +
Sbjct: 1 MVQTKHFCMLHRTL--------LCPKRIKF---LQSISKLKRHITQIHAFVISTGNLLNG 49
Query: 177 VVSSAMVDLYAKCG---DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
SS DL A CG ++S RK+FD + ++ V++S+I Y+ +E + + M
Sbjct: 50 --SSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQM 107
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
++++PD + T++AC+ L G V + + G++ND FV S +L LY G +
Sbjct: 108 IAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKM 167
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
+AE LF ++ +D++ W +M+ AQ G+ S ++++ +E+ + ++ +L+
Sbjct: 168 DEAEVLFGKMAKRDVICWTTMVTGFAQAGK-SLKAVEFYREM-QNEGFGRDRVVMLGLLQ 225
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
+ + D GR +H + ++ + +V +LV MY++ G I A + F ++ K S
Sbjct: 226 ASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVS 285
Query: 414 WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAI 473
W S+I + QNG+ ++A E EM + G +L + +CSQ+ ++ G+ H + +
Sbjct: 286 WGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYIL 345
Query: 474 KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIE 533
K + D ++++DMY+KCG + S+++F+ + + V +N MI Y HG ++ +
Sbjct: 346 KR-HVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVS 404
Query: 534 IFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAY 593
+F + ++ + P+ TF ++LSA SH+G +E + F++M+ KYKI+P +HY CL+D
Sbjct: 405 LFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLL 464
Query: 594 GRAGRLEEAYQIVQKDGSESA---WRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYI 650
RAGR+EEA ++ + ++A W LLS C NH N +G+ +A K+++LNP
Sbjct: 465 ARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQT 524
Query: 651 LLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
L+SN + KW+E R+ M ++K PG S
Sbjct: 525 LVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYS 558
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 181/383 (47%), Gaps = 8/383 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P R V + ++I + R + + +L++ M +P+ TF++ ++AC + + G
Sbjct: 76 LPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKG 135
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+ V G + D F SS++ +Y G + +A +F + +RD++ W M++GFAQ
Sbjct: 136 EAVWCKAVDFGYKNDVFVCSSVLNLYMKCG-KMDEAEVLFGKMAKRDVICWTTMVTGFAQ 194
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
G + EM + EG D + LL+ LG+ +HG + G + V
Sbjct: 195 AGKSLKAVEFYREM-QNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVV 253
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V +++VD+YAK G + ++F M K W S+ISG+ N +A +M
Sbjct: 254 VETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLG 313
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
+PD L L AC ++ L TG VH ++K H D A+ L+ +Y+ G L +
Sbjct: 314 FQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLDRVTATALMDMYSKCGALSSSR 372
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
++F + KD+V WN+MI + G G L+ ++++ AT ++L + +
Sbjct: 373 EIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE--SNIEPDHATFASLLSALSH 430
Query: 358 KSDLPAGRQIHSLVMKSSVSHPT 380
+ G+ S+++ P+
Sbjct: 431 SGLVEQGQHWFSVMINKYKIQPS 453
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 187/589 (31%), Positives = 300/589 (50%), Gaps = 16/589 (2%)
Query: 109 VAWNVMISGFAQVGDFC-MVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL-----GEVMQ 162
+AW++MI +A DF L+ +M G++P T+ +LK C+ L G+++
Sbjct: 69 IAWDLMIRAYAS-NDFAEKALDLYYKMLN-SGVRPTKYTYPFVLKACAGLRAIDDGKLIH 126
Query: 163 IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNR 222
H S F TD V +A+VD YAKCG++ K+FD M ++D W+++ISG++++
Sbjct: 127 SHVNCSDFA--TDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 223 GEEAVHFFKDMCK-QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVAS 281
+ + F DM + + P+ + A L G VHG + G ND V +
Sbjct: 185 LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKT 244
Query: 282 VLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSL 341
+L +YA + A ++F K+ V W++MI + + Q L
Sbjct: 245 GILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVA 304
Query: 342 QIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFK 401
+ + IL C DL GR +H +K+ V N ++ Y++ G + DAF+
Sbjct: 305 MVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFR 364
Query: 402 AFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLA 461
F +I KD S++S+I N E+ L EM GI +L +++CS L A
Sbjct: 365 QFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAA 424
Query: 462 INVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICG 521
+ G H + + GY + + ++++DMY KCG ++ +K+VFD K + V +N M+ G
Sbjct: 425 LGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFG 484
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY-KYKIK 580
+ HG K+A+ +F +++ GV P++VT LA+LSACSH+G +++ LF M + +
Sbjct: 485 FGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVI 544
Query: 581 PESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWR---TLLSACRNHNNTKIGEKSAKK 637
P +HY+C+ D RAG L+EAY V K E R TLLSAC + N ++G + +KK
Sbjct: 545 PRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKK 604
Query: 638 MIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
M L + S +LLSN Y +WE+A R K G+ K PG SW+
Sbjct: 605 MQSLGETTE-SLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/559 (26%), Positives = 267/559 (47%), Gaps = 11/559 (1%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P N + W +I ++ KA L+ M RP +YT+ +L+ACA + G
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
IH + S D + ++LV Y+ G L A VF ++ +RD+VAWN MISGF+
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCG-ELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVV 178
V LF +M ++GL P+ T V + G + + +HG ++ G D VV
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVH-FFKDMCKQR 237
+ ++D+YAK + R++FD +K+ WS++I GY N +EA FF+ +
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 238 VKPDQHV-LSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
V V + L C DL+ G VH +K G D V + +++ YA +G L DA
Sbjct: 303 VAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA 362
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+ F I KD++++NS+I + S +L E+ RT+ ++ TL+ +L +C
Sbjct: 363 FRQFSEIGLKDVISYNSLITG-CVVNCRPEESFRLFHEM-RTSGIRPDITTLLGVLTACS 420
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS 416
+ + L G H + + T + NAL+ MY++CG++ A + F + +D SW++
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNT 480
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSG 476
++ + +G+ EAL L M G+ +L +S+CS ++ GKQ +
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540
Query: 477 YNHDVYVG--SSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQAKQAIE 533
+N + + + D+ A+ G+++++ + +P+ + ++ + A+ E
Sbjct: 541 FNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNE 600
Query: 534 IFTMLEKNGVTPNQVTFLA 552
+ ++ G T + L+
Sbjct: 601 VSKKMQSLGETTESLVLLS 619
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/533 (24%), Positives = 249/533 (46%), Gaps = 22/533 (4%)
Query: 147 FVSLLKCCS-----TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDS 201
F+SLL+ C LG+V+ H L + V+ + + LYA C +V R +FD
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 202 MEEK--DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLN 259
+ + W +I Y N+ E+A+ + M V+P ++ L+AC + ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 260 TGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHA 319
G +H + + D +V + L+ YA G L A K+F + +D+VAWN+MI +
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHP 379
L + + L ++ R L +T++ + + L G+ +H + S+
Sbjct: 181 -LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 380 TLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLA 439
+V ++ +Y++ I A + F K++ +WS++IG Y +N M EA E+ +ML
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 440 EG--ITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM 497
T ++ L + C++ ++ G+ H +A+K+G+ D+ V ++II YAK G +
Sbjct: 300 NDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL 359
Query: 498 EDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSAC 557
D+ + F + + YN++I G + + +++ +F + +G+ P+ T L +L+AC
Sbjct: 360 CDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 558 SHAGYIEDTLNLFTL-MLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES--A 614
SH + + +++ Y + + + L+D Y + G+L+ A ++ +
Sbjct: 420 SHLAALGHGSSCHGYCVVHGYAVN--TSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVS 477
Query: 615 WRTLLSACRNHNNTKIGEKSAKKMIE--LNPSDHASYILLSNI----YIEEGK 661
W T+L H K M E +NP + +LS ++EGK
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGK 530
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 169/379 (44%), Gaps = 22/379 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
MP R++V W +IS + LF DMR +D PN T + A
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G +HG R G D + ++ +Y+ + + A VF +++ V W+ MI G+
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIY-ARRVFDLDFKKNEVTWSAMIGGYV 282
Query: 120 QVGDFCMVQRLFSEMWEV--EGLKPDNRTFVS------LLKCCSTLGEVMQ---IHGLAS 168
+ + E EV + L DN V+ +L C+ G++ +H A
Sbjct: 283 E-------NEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAV 335
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVH 228
K G D V + ++ YAK G + + F + KD ++S+I+G VN R EE+
Sbjct: 336 KAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFR 395
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F +M ++PD L L AC + L G HG + +G+ + + + L+ +Y
Sbjct: 396 LFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYT 455
Query: 289 NFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATL 348
G L A+++F + +DIV+WN+M+ G G ++ L + T + TL
Sbjct: 456 KCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG-KEALSLFNSMQE-TGVNPDEVTL 513
Query: 349 IAILKSCKNKSDLPAGRQI 367
+AIL +C + + G+Q+
Sbjct: 514 LAILSACSHSGLVDEGKQL 532
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 274/535 (51%), Gaps = 8/535 (1%)
Query: 157 LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISG 216
LG V+ + + +++ ++++Y+K S R + ++ W+S+ISG
Sbjct: 24 LGRVVHAR-IVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 217 YTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQND 276
N A+ F +M ++ V P+ +A + TG Q+H +K G D
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 277 CFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELH 336
FV +Y DA KLF I ++++ WN+ I G+ +++ E
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR-PREAIEAFIEFR 201
Query: 337 RTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQI 396
R T A L +C + L G Q+H LV++S V N L+ Y +C QI
Sbjct: 202 RIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 397 GDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSC 456
+ F ++ K+ SW S++ Y QN + +A L + + + + + +S+C
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320
Query: 457 SQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYN 516
+ + + +G+ H A+K+ ++VGS+++DMY KCG +EDS++ FD + N V N
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGV--TPNQVTFLAMLSACSHAGYIEDTLNLFTLML 574
++I GYAH GQ A+ +F + G TPN +TF+++LSACS AG +E+ + +F M
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Query: 575 YKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIG 631
Y I+P +EHYSC+VD GRAG +E AY+ ++K + S W L +ACR H ++G
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLG 500
Query: 632 EKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+A+ + +L+P D +++LLSN + G+W EA RE++ G+KK G SW+
Sbjct: 501 LLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 555
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 179/371 (48%), Gaps = 9/371 (2%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P RNVV+WT+LIS + G A F +MR PN++TF +A A+ L G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRD-ACCVFHDLLERDLVAWNVMISGFAQ 120
QIH + V+ G D F G S MY + LRD A +F ++ ER+L WN IS
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCK--TRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFGAETDAV 177
G F E ++G P++ TF + L CS L MQ+HGL + G +TD
Sbjct: 187 DGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V + ++D Y KC + S IF M K+ W S+++ Y N+ E+A + K
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
V+ ++SS L AC + L G +H +K + FV S L+ +Y G + D+E
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQEL-HRTTSLQIQGATLIAILKSCK 356
+ F + +K++V NS+I +A GQ ++ L +E+ R T +++L +C
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQ-VDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 357 NKSDLPAGRQI 367
+ G +I
Sbjct: 425 RAGAVENGMKI 435
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 166/370 (44%), Gaps = 22/370 (5%)
Query: 245 LSSTLRACVEIEDLNTGVQVHGQMIKN-GHQNDCFVASVLLTLYANFGGLRDAEKLFRRI 303
L L+ + + G VH +++K F+A+ L+ +Y+ A + R
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 304 DDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPA 363
+++V+W S+I AQ G S+ ++ + R + T K+ +
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFE--MRREGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 364 GRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQ 423
G+QIH+L +K VG + MY + DA K F +I ++ +W++ I
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 424 NGMESEALELCKEML-----AEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN 478
+G EA+E E ITF ++ +++CS L +N+G Q H ++SG++
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAF-----LNACSDWLHLNLGMQLHGLVLRSGFD 241
Query: 479 HDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML 538
DV V + +ID Y KC + S+ +F N V + +++ Y + + ++A ++
Sbjct: 242 TDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS 301
Query: 539 EKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY----SCLVDAYG 594
K+ V + ++LSAC+ +E ++ + +K E S LVD YG
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLE-----LGRSIHAHAVKACVERTIFVGSALVDMYG 356
Query: 595 RAGRLEEAYQ 604
+ G +E++ Q
Sbjct: 357 KCGCIEDSEQ 366
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 7/273 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P RN+ TW IS+ + G +A + F + R +D PN TF L AC+ N+G
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+Q+HG+++RSG + D + L+ Y +R + +F ++ ++ V+W +++ + Q
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFY-GKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ 287
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
+ L+ + + ++ + S+L C+ + + IH A K E
Sbjct: 288 NHEDEKASVLYLRSRK-DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIF 346
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V SA+VD+Y KCG + + FD M EK+ +S+I GY + + A+ F++M +
Sbjct: 347 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406
Query: 238 VKPDQHVLS--STLRACVEIEDLNTGVQVHGQM 268
P + ++ S L AC + G+++ M
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 298 bits (763), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 194/679 (28%), Positives = 335/679 (49%), Gaps = 43/679 (6%)
Query: 48 LRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERD 107
LR C + G I +++ G+ ++ F ++++ MY + L DA VF ++ ER+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDF-RLLSDAHKVFDEMSERN 70
Query: 108 LVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLA 167
+V W M+SG+ G L+ M + E + + ++LK C +G++ +
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 168 SKFGAET---DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGE 224
+ G E D V+ +++VD+Y K G + F + + W+++ISGY +
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 225 EAVHFFKDMCKQRV--------------KP----------------DQHVLSSTLRACVE 254
EAV F M + V P D L L+AC
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRID---DKDIVAW 311
L G Q+H ++K+G ++ F S L+ +Y+N G L A +F + + + W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV 371
NSM L+ + + + ++ LL +++++ L TL LK C N +L G Q+HSLV
Sbjct: 311 NSM-LSGFLINEENEAALWLLLQIYQS-DLCFDSYTLSGALKICINYVNLRLGLQVHSLV 368
Query: 372 MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEAL 431
+ S +VG+ LV +++ G I DA K F + KD ++S +I ++G S A
Sbjct: 369 VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAF 428
Query: 432 ELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMY 491
L +E++ G+ + + + CS L ++ GKQ H IK GY + ++++DMY
Sbjct: 429 YLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMY 488
Query: 492 AKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFL 551
KCG +++ +FD ++ + V + +I G+ +G+ ++A F + G+ PN+VTFL
Sbjct: 489 VKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFL 548
Query: 552 AMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK--- 608
+LSAC H+G +E+ + M +Y ++P EHY C+VD G+AG +EA +++ K
Sbjct: 549 GLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPL 608
Query: 609 DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDC 668
+ ++ W +LL+AC H N + A+K+++ P D + Y LSN Y G W++
Sbjct: 609 EPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKV 668
Query: 669 REKMAKTGVKKDPGSSWLI 687
RE K G K+ G SW+I
Sbjct: 669 REAAKKLGA-KESGMSWII 686
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/572 (27%), Positives = 276/572 (48%), Gaps = 53/572 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMD---ERPNEYTFSVLLRACATPALW 57
M RN+VTWTT++S + G KA +L+ R++D E NE+ +S +L+AC
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYR--RMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 58 NVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLR----------------------- 94
+G+ ++ + + L D +S+V MY NG +
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 95 -------DACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTF 147
+A +FH + + ++V+WN +ISGF G ++ F + EGL D
Sbjct: 184 CKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALE--FLVRMQREGLVLDGFAL 241
Query: 148 VSLLKCCS-----TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSM 202
LK CS T+G+ Q+H K G E+ SA++D+Y+ CG + +F
Sbjct: 242 PCGLKACSFGGLLTMGK--QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQE 299
Query: 203 EEKDN---FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLN 259
+ N VW+S++SG+ +N E A+ + + + D + LS L+ C+ +L
Sbjct: 300 KLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLR 359
Query: 260 TGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHA 319
G+QVH ++ +G++ D V S+L+ L+AN G ++DA KLF R+ +KDI+A++ +I
Sbjct: 360 LGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV 419
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHP 379
+ G +S + L +EL + L + ILK C + + L G+QIH L +K
Sbjct: 420 KSGF-NSLAFYLFRELIK-LGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE 477
Query: 380 TLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLA 439
+ ALV MY +CG+I + F ++ +D SW+ II + QNG EA +M+
Sbjct: 478 PVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN 537
Query: 440 EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGS--SIIDMYAKCGHM 497
GI + +S+C + + + +KS Y + Y+ ++D+ + G
Sbjct: 538 IGIEPNKVTFLGLLSACRHSGLLEEARS-TLETMKSEYGLEPYLEHYYCVVDLLGQAGLF 596
Query: 498 EDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQA 528
+++ ++ + ++P++ I+ +++ H A
Sbjct: 597 QEANELINKMPLEPDKTIWTSLLTACGTHKNA 628
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 213/444 (47%), Gaps = 30/444 (6%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP NVV+W LIS + GS P+A + M+ + + L+AC+ L +G
Sbjct: 199 MPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG 257
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHD---LLERDLVAWNVMISG 117
Q+H +V+SGLE FA S+L+ MYSN GS L A VFH + + WN M+SG
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGS-LIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFGAET 174
F + L ++++ + L D+ T LK C L +Q+H L G E
Sbjct: 317 FLINEENEAALWLLLQIYQSD-LCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
D +V S +VDL+A G++ K+F + KD +S +I G + A + F+++
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
K + DQ ++S+ L+ C + L G Q+HG IK G++++ A+ L+ +Y G +
Sbjct: 436 KLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEID 495
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG--ATLIAIL 352
+ LF + ++D+V+W +I+ Q G R + + H+ ++ I+ T + +L
Sbjct: 496 NGVVLFDGMLERDVVSWTGIIVGFGQNG----RVEEAFRYFHKMINIGIEPNKVTFLGLL 551
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDA--FKAFVDIVCK- 409
+C++ L R + P L H Y +G A F+ +++ K
Sbjct: 552 SACRHSGLLEEARSTLETMKSEYGLEPY-----LEHYYCVVDLLGQAGLFQEANELINKM 606
Query: 410 ----DDSSWSSII---GTYKQNGM 426
D + W+S++ GT+K G+
Sbjct: 607 PLEPDKTIWTSLLTACGTHKNAGL 630
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 214/451 (47%), Gaps = 41/451 (9%)
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
D ++++ LR C +++ G + +IK G + F+A+ ++++Y +F L DA K+F
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
+ +++IV W +M+ + G+ +++++L + + + A+LK+C D
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGK-PNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
+ G ++ + K ++ ++ N++V MY + G++ +A +F +I+ +SW+++I
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 421 YKQNGMESE------------------------------ALELCKEMLAEGITFTSYSLP 450
Y + G+ E ALE M EG+ ++LP
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALP 242
Query: 451 LCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ--- 507
+ +CS + +GKQ H +KSG + S++IDMY+ CG + + VF +
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 508 VKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTL 567
V + ++N+M+ G+ + + + A+ + + ++ + + T L C + + L
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGL 362
Query: 568 NLFTLMLYK-YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES--AWRTLLSACRN 624
+ +L++ Y++ + S LVD + G +++A+++ + ++ A+ L+ C
Sbjct: 363 QVHSLVVVSGYEL--DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
Query: 625 HNNTKIGEKSAKKMIELNPSDHASYILLSNI 655
+ +++I+L A ++SNI
Sbjct: 421 SGFNSLAFYLFRELIKLGLD--ADQFIVSNI 449
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 207/713 (29%), Positives = 354/713 (49%), Gaps = 54/713 (7%)
Query: 18 RAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDK 76
R+G A +LF D+ R RP++Y+ S+ + G Q+H +RSGL
Sbjct: 33 RSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHS 92
Query: 77 FAGSSLVYMYSNNGS------------------------------NLRDACCVFHDLLER 106
++L+ +Y G+ ++ A VF + ER
Sbjct: 93 HVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPER 152
Query: 107 DLVA-WNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC--STLGEVMQI 163
D VA WN MI+G + G LF EM ++ G++ D F ++L C +L Q+
Sbjct: 153 DDVAIWNAMITGCKESGYHETSVELFREMHKL-GVRHDKFGFATILSMCDYGSLDFGKQV 211
Query: 164 HGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE--KDNFVWSSIISGYTVNN 221
H L K G + V +A++ +Y C V +F+ + +D ++ +I G
Sbjct: 212 HSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFK 271
Query: 222 RGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVAS 281
R +E++ F+ M + ++P S + +C G QVHG IK G++ V++
Sbjct: 272 R-DESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSN 327
Query: 282 VLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSL 341
+T+Y++F A K+F +++KD+V WN+MI ++ Q G S +M + + +H +
Sbjct: 328 ATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKS-AMSVYKRMH-IIGV 385
Query: 342 QIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFK 401
+ T ++L + DL + + ++K +S + NAL+ YS+ GQI A
Sbjct: 386 KPDEFTFGSLLAT---SLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADL 442
Query: 402 AFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFT--SYSLPLCISSCSQL 459
F + K+ SW++II + NG E LE +L + +Y+L +S C
Sbjct: 443 LFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVST 502
Query: 460 LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMI 519
++ +G Q H + ++ G + +G+++I+MY++CG +++S +VF+ + + V +N++I
Sbjct: 503 SSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLI 562
Query: 520 CGYAHHGQAKQAIEIF-TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYK 578
Y+ HG+ + A+ + TM ++ V P+ TF A+LSACSHAG +E+ L +F M+ +
Sbjct: 563 SAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHG 622
Query: 579 IKPESEHYSCLVDAYGRAGRLEEAYQIVQKD----GSE-SAWRTLLSACRNHNNTKIGEK 633
+ +H+SCLVD GRAG L+EA +V+ GS W L SAC H + K+G+
Sbjct: 623 VIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKM 682
Query: 634 SAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
AK ++E D + Y+ LSNIY G W+EA + R + G K G SW+
Sbjct: 683 VAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/541 (29%), Positives = 275/541 (50%), Gaps = 23/541 (4%)
Query: 1 MPHRN-VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNV 59
MP R+ V W +I+ +G + +LF +M + R +++ F+ +L C +L +
Sbjct: 149 MPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSL-DF 207
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFH--DLLERDLVAWNVMISG 117
G Q+H +++++G ++L+ MY N + DAC VF D+ RD V +NV+I G
Sbjct: 208 GKQVHSLVIKAGFFIASSVVNALITMYFN-CQVVVDACLVFEETDVAVRDQVTFNVVIDG 266
Query: 118 FAQVG-DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDA 176
A D ++ +F +M E L+P + TFVS++ CS Q+HGLA K G E
Sbjct: 267 LAGFKRDESLL--VFRKMLEA-SLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYT 323
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+VS+A + +Y+ D + K+F+S+EEKD W+++IS Y G+ A+ +K M
Sbjct: 324 LVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHII 383
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
VKPD+ S L ++++ L V +IK G + +++ L++ Y+ G + A
Sbjct: 384 GVKPDEFTFGSLLATSLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLG---QGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
+ LF R K++++WN++I G +G R LL+ R TL +L
Sbjct: 441 DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILP---DAYTLSTLLS 497
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
C + S L G Q H+ V++ TL+GNAL++MYS+CG I ++ + F + KD S
Sbjct: 498 ICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVS 557
Query: 414 WSSIIGTYKQNGMESEALELCKEMLAEG-ITFTSYSLPLCISSCSQLLAINVGKQ-FHVF 471
W+S+I Y ++G A+ K M EG + + + +S+CS + G + F+
Sbjct: 558 WNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSM 617
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSK---KVFDAQVKPNEVIYNAMICGYAHHGQA 528
G +V S ++D+ + GH+++++ K+ + + ++ A+ A HG
Sbjct: 618 VEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDL 677
Query: 529 K 529
K
Sbjct: 678 K 678
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 149/636 (23%), Positives = 279/636 (43%), Gaps = 101/636 (15%)
Query: 93 LRDACCVFHDLL-----ERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTF 147
+R A C+ L L+ N ++G + G+ +LF+++ L+PD +
Sbjct: 1 MRKALCLTESLSAIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSV 60
Query: 148 VSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE 204
+ L + + Q+H A + G + VS+ ++ LY + G+++S +K FD ++E
Sbjct: 61 SLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDE 120
Query: 205 KDNF--------------------------------VWSSIISGYTVNNRGEEAVHFFKD 232
D + +W+++I+G + E +V F++
Sbjct: 121 PDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFRE 180
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGG 292
M K V+ D+ ++ L C + L+ G QVH +IK G V + L+T+Y N
Sbjct: 181 MHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQV 239
Query: 293 LRDAEKLFRRID--DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
+ DA +F D +D V +N +I A G S+ + +++ SL+ T ++
Sbjct: 240 VVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLE-ASLRPTDLTFVS 296
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD 410
++ SC S G Q+H L +K+ TLV NA + MYS G A K F + KD
Sbjct: 297 VMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKD 353
Query: 411 DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHV 470
+W+++I +Y Q + A+ + K M G+ ++ +++ L ++V +
Sbjct: 354 LVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS---LDLDVLEMVQA 410
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQ 530
IK G + + + +++I Y+K G +E + +F+ ++ N + +NA+I G+ H+G +
Sbjct: 411 CIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFE 470
Query: 531 AIEIFTMLEKNGVT--PNQVTFLAMLSAC------------------------------- 557
+E F+ L ++ V P+ T +LS C
Sbjct: 471 GLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNAL 530
Query: 558 ----SHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA---YQIVQKDG 610
S G I+++L +F M K + ++ L+ AY R G E A Y+ +Q +G
Sbjct: 531 INMYSQCGTIQNSLEVFNQMSEKDVVS-----WNSLISAYSRHGEGENAVNTYKTMQDEG 585
Query: 611 S----ESAWRTLLSACRNHNNTKIGEKSAKKMIELN 642
+ + +LSAC + + G + M+E +
Sbjct: 586 KVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFH 621
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 301/551 (54%), Gaps = 21/551 (3%)
Query: 147 FVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS-SAMVDLYAKCGDVSSCRKIFDSMEEK 205
FV+L C L + A+ + E V S + +V YAK + R++FD + +
Sbjct: 49 FVNLYSKCGRLS-----YARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQP 103
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
D ++++ISGY A+ FK M K + D LS + AC + DL Q+H
Sbjct: 104 DTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLH 161
Query: 266 GQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD-KDIVAWNSMILAHAQLGQG 324
+ G + V + +T Y+ G LR+A +F +D+ +D V+WNSMI+A+ Q +G
Sbjct: 162 CFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEG 221
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
+ +++ L +E+ +I TL ++L + + L GRQ H ++K+ + VG+
Sbjct: 222 A-KALALYKEM-IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGS 279
Query: 385 ALVHMYSECGQ---IGDAFKAFVDIVCKDDSSWSSIIGTYKQNG-MESEALELCKEMLAE 440
L+ YS+CG + D+ K F +I+ D W+++I Y N + EA++ ++M
Sbjct: 280 GLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRI 339
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGY-NHDVYVGSSIIDMYAKCGHMED 499
G S S+CS L + + KQ H AIKS ++ + V +++I +Y K G+++D
Sbjct: 340 GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQD 399
Query: 500 SKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSH 559
++ VFD + N V +N MI GYA HG +A+ ++ + +G+ PN++TF+A+LSAC+H
Sbjct: 400 ARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAH 459
Query: 560 AGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ----KDGSESAW 615
G +++ F M +KI+PE+EHYSC++D GRAG+LEEA + + K GS AW
Sbjct: 460 CGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGS-VAW 518
Query: 616 RTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKT 675
LL ACR H N + E++A +++ + P Y++L+N+Y + KWEE R+ M
Sbjct: 519 AALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGK 578
Query: 676 GVKKDPGSSWL 686
++K PG SW+
Sbjct: 579 RIRKKPGCSWI 589
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 250/544 (45%), Gaps = 70/544 (12%)
Query: 66 VLVRSGLERDKFAGSSLVYMY-----------SNNGSNLRDACC---------------- 98
+L++S ERD F G SL +Y SN+ NL C
Sbjct: 14 LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 99 ----------------------VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWE 136
+F ++ + D V++N +ISG+A + LF M +
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 137 VEGLKPDNRTFVSLL-KCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSC 195
+ G + D T L+ CC + + Q+H + G ++ + V++A V Y+K G +
Sbjct: 134 L-GFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREA 192
Query: 196 RKIFDSMEE-KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVE 254
+F M+E +D W+S+I Y + G +A+ +K+M + K D L+S L A
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFG---GLRDAEKLFRRIDDKDIVAW 311
++ L G Q HG++IK G + V S L+ Y+ G G+ D+EK+F+ I D+V W
Sbjct: 253 LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV 371
N+MI ++ + S +++ +++ R + + + + +C N S +QIH L
Sbjct: 313 NTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371
Query: 372 MKSSV-SHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEA 430
+KS + S+ V NAL+ +Y + G + DA F + + S++ +I Y Q+G +EA
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431
Query: 431 LELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF-----HVFAIKSGYNHDVYVGS 485
L L + ML GI + +S+C+ ++ G+++ F I+ H S
Sbjct: 432 LLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY----S 487
Query: 486 SIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQ---AKQAIEIFTMLEKN 541
+ID+ + G +E++++ DA KP V + A++ H A++A +++
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPL 547
Query: 542 GVTP 545
TP
Sbjct: 548 AATP 551
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 221/462 (47%), Gaps = 20/462 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P + V++ TLIS + A A LF MR + + +T S L+ AC ++
Sbjct: 100 IPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRV--DLI 157
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE-RDLVAWNVMISGFA 119
Q+H V G + ++ V YS G LR+A VF+ + E RD V+WN MI +
Sbjct: 158 KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL-LREAVSVFYGMDELRDEVSWNSMIVAYG 216
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDA 176
Q + L+ EM +G K D T S+L ++L ++ Q HG K G ++
Sbjct: 217 QHKEGAKALALYKEMI-FKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNS 275
Query: 177 VVSSAMVDLYAKCG---DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNR-GEEAVHFFKD 232
V S ++D Y+KCG + K+F + D VW+++ISGY++N EEAV F+
Sbjct: 276 HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQ 335
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG-HQNDCFVASVLLTLYANFG 291
M + +PD AC + + Q+HG IK+ N V + L++LY G
Sbjct: 336 MQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSG 395
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
L+DA +F R+ + + V++N MI +AQ G G+ LL + + + T +A+
Sbjct: 396 NLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT--EALLLYQRMLDSGIAPNKITFVAV 453
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKD 410
L +C + + G++ + + ++ P + ++ + G++ +A + F+D +
Sbjct: 454 LSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA-ERFIDAMPYK 512
Query: 411 DSS--WSSIIGTYKQNGMESEALELCKE-MLAEGITFTSYSL 449
S W++++G +++ + A E M+ + + T Y +
Sbjct: 513 PGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVM 554
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 45/214 (21%)
Query: 464 VGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM-------------------------- 497
GK H +KS Y+ + +++Y+KCG +
Sbjct: 26 TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYA 85
Query: 498 EDSK-----KVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLA 552
+DSK ++FD +P+ V YN +I GYA + A+ +F + K G + T
Sbjct: 86 KDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSG 145
Query: 553 MLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA----YGRAGRLEEAYQI--- 605
+++AC D ++L L+ + + + YS + +A Y + G L EA +
Sbjct: 146 LIAACC------DRVDLIK-QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 606 VQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMI 639
+ + E +W +++ A H K+MI
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMI 232
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 295 bits (755), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 169/582 (29%), Positives = 301/582 (51%), Gaps = 45/582 (7%)
Query: 144 NRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVD---LYAKCGDVSSCRKIFD 200
N +SLL C TL + IH K G S +++ L + +F
Sbjct: 33 NHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFK 92
Query: 201 SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNT 260
+++E + +W+++ G+ +++ A+ + M + P+ + L++C + +
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 152
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA------------------------ 296
G Q+HG ++K G D +V + L+++Y G L DA
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 297 -------EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLI 349
+KLF I KD+V+WN+MI +A+ G +++L +++ +T +++ +T++
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN-YKEALELFKDMMKT-NVRPDESTMV 270
Query: 350 AILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK 409
++ +C + GRQ+H + + NAL+ +YS+CG++ A F + K
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 330
Query: 410 DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFH 469
D SW+++IG Y + EAL L +EML G T ++ + +C+ L AI++G+ H
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 470 VFAIK--SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQ 527
V+ K G + + +S+IDMYAKCG +E + +VF++ + + +NAMI G+A HG+
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 528 AKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYS 587
A + ++F+ + K G+ P+ +TF+ +LSACSH+G ++ ++F M YK+ P+ EHY
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 588 CLVDAYGRAGRLE-----EAYQIVQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELN 642
C++D G +G + ++ DG W +LL AC+ H N ++GE A+ +I++
Sbjct: 511 CMIDLLGHSGLFKEAEEMINMMEMEPDG--VIWCSLLKACKMHGNVELGESFAENLIKIE 568
Query: 643 PSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
P + SY+LLSNIY G+W E R + G+KK PG S
Sbjct: 569 PENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 610
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 150/579 (25%), Positives = 259/579 (44%), Gaps = 78/579 (13%)
Query: 63 IHGVLVRSGLERDKFAGSSLVY--MYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
IH +++ GL +A S L+ + S + L A VF + E +L+ WN M G A
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETDAV 177
D +L+ M + GL P++ TF +LK C+ E QIHG K G + D
Sbjct: 112 SSDPVSALKLYVCMISL-GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY 170
Query: 178 VSSAMVDL-------------------------------YAKCGDVSSCRKIFDSMEEKD 206
V ++++ + YA G + + +K+FD + KD
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 230
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHG 266
W+++ISGY +EA+ FKDM K V+PD+ + + + AC + + G QVH
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 267 QMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSS 326
+ +G ++ + + L+ LY+ G L A LF R+ KD+++WN++I + +
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL-YK 349
Query: 327 RSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK--SSVSHPTLVGN 384
++ L QE+ R+ T+++IL +C + + GR IH + K V++ + +
Sbjct: 350 EALLLFQEMLRSGETP-NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
+L+ MY++CG I A + F I+ K SSW+++I + +G + +L M GI
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
+ +S+CS +++G+ H+F +
Sbjct: 469 DDITFVGLLSACSHSGMLDLGR--HIFRTMTQ---------------------------- 498
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIE 564
D ++ P Y MI H G K+A M+ + P+ V + ++L AC G +E
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAE---EMINMMEMEPDGVIWCSLLKACKMHGNVE 555
Query: 565 DTLNLFTLMLYKYKIKPESE-HYSCLVDAYGRAGRLEEA 602
+ ++ KI+PE+ Y L + Y AGR E
Sbjct: 556 LGESFAENLI---KIEPENPGSYVLLSNIYASAGRWNEV 591
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 197/412 (47%), Gaps = 38/412 (9%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N++ W T+ H + A +L+ M + PN YTF +L++CA + G QIH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNG-----------SNLRDACC--------------- 98
G +++ G + D + +SL+ MY NG S RD
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 99 ----VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
+F ++ +D+V+WN MISG+A+ G++ LF +M + ++PD T V+++ C
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN-VRPDESTMVTVVSAC 276
Query: 155 STLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWS 211
+ G + Q+H G ++ + +A++DLY+KCG++ + +F+ + KD W+
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 212 SIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK- 270
++I GYT N +EA+ F++M + P+ + S L AC + ++ G +H + K
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 271 -NGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM 329
G N + + L+ +YA G + A ++F I K + +WN+MI A G+ + S
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA-SF 455
Query: 330 QLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTL 381
L + R +Q T + +L +C + L GR I + + P L
Sbjct: 456 DLFSRM-RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 141/276 (51%), Gaps = 7/276 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P ++VV+W +IS + G+ +A +LF DM + RP+E T ++ ACA +G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+H + G + ++L+ +YS G L AC +F L +D+++WN +I G+
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCG-ELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKF--GAETD 175
+ + LF EM G P++ T +S+L C+ LG + IH K G
Sbjct: 345 MNLYKEALLLFQEMLR-SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA 403
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
+ + ++++D+YAKCGD+ + ++F+S+ K W+++I G+ ++ R + + F M K
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
++PD L AC L+ G + M ++
Sbjct: 464 IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 296/568 (52%), Gaps = 67/568 (11%)
Query: 186 YAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVL 245
Y+K GD+ S + FD + ++D+ W+++I GY + +A+ DM K+ ++P Q L
Sbjct: 90 YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTL 149
Query: 246 SSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD 305
++ L + + TG +VH ++K G + + V++ LL +YA G A+ +F R+
Sbjct: 150 TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
Query: 306 KDIVAWNSMILAHAQLGQGSS------------------------------RSMQLLQEL 335
+DI +WN+MI H Q+GQ R++ + ++
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 336 HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECG- 394
R + L TL ++L +C N L G+QIHS ++ + +V NAL+ MYS CG
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 395 -----------------------------QIGDAFKA---FVDIVCKDDSSWSSIIGTYK 422
++GD +A FV + +D +W+++I Y+
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 423 QNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVY 482
Q+G EA+ L + M+ G SY+L +S S L +++ GKQ H A+KSG + V
Sbjct: 390 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS 449
Query: 483 VGSSIIDMYAKCGHMEDSKKVFD-AQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKN 541
V +++I MYAK G++ + + FD + + + V + +MI A HG A++A+E+F +
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 542 GVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEE 601
G+ P+ +T++ + SAC+HAG + F +M KI P HY+C+VD +GRAG L+E
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 602 AYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIE 658
A + ++K E W +LLSACR H N +G+ +A++++ L P + +Y L+N+Y
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSA 629
Query: 659 EGKWEEARDCREKMAKTGVKKDPGSSWL 686
GKWEEA R+ M VKK+ G SW+
Sbjct: 630 CGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 168/618 (27%), Positives = 273/618 (44%), Gaps = 130/618 (21%)
Query: 74 RDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSE 133
R F+ ++++ YS G ++ C F L +RD V+W MI G+ +G + R+ +
Sbjct: 78 RTAFSWNTVLSAYSKRG-DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 134 MWEVEGLKPDNRTFVSLLKC-----CSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAK 188
M + EG++P T ++L C G+ ++H K G + VS++++++YAK
Sbjct: 137 MVK-EGIEPTQFTLTNVLASVAATRCMETGK--KVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 189 CGDVSSCRKIFD-------------------------------SMEEKDNFVWSSIISGY 217
CGD + +FD M E+D W+S+ISG+
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 218 TVNNRGEE--AVHFFKDMCKQR-VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ 274
N RG + A+ F M + + PD+ L+S L AC +E L G Q+H ++ G
Sbjct: 254 --NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 275 NDCFVASVLLTLYANFGGLRDAEKL---------------------------------FR 301
V + L+++Y+ GG+ A +L F
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFV 371
Query: 302 RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQEL----HRTTSLQIQGATLIAILKSCKN 357
+ D+D+VAW +MI+ + Q G ++ L + + R S TL A+L +
Sbjct: 372 SLKDRDVVAWTAMIVGYEQHGS-YGEAINLFRSMVGGGQRPNSY-----TLAAMLSVASS 425
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS-SWSS 416
+ L G+QIH +KS + V NAL+ MY++ G I A +AF I C+ D+ SW+S
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 485
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSG 476
+I Q+G EALEL + ML EG+ + S+C+ +N G+Q+
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY-------- 537
Query: 477 YNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFT 536
DM M+D K+ P Y M+ + G ++A E
Sbjct: 538 -----------FDM------MKDVDKII-----PTLSHYACMVDLFGRAGLLQEAQEF-- 573
Query: 537 MLEKNGVTPNQVTFLAMLSACS-HAGYIEDTLNLFTLMLYKYKIKPE-SEHYSCLVDAYG 594
+EK + P+ VT+ ++LSAC H + L+L ++PE S YS L + Y
Sbjct: 574 -IEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL----LEPENSGAYSALANLYS 628
Query: 595 RAGRLEEAYQIVQ--KDG 610
G+ EEA +I + KDG
Sbjct: 629 ACGKWEEAAKIRKSMKDG 646
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 157/670 (23%), Positives = 283/670 (42%), Gaps = 124/670 (18%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P R+ V+WTT+I + G KA ++ DM P ++T + +L + A G
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETG 165
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNL-----------RD-------------- 95
++H +V+ GL + +SL+ MY+ G + RD
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225
Query: 96 -----ACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSL 150
A F + ERD+V WN MISGF Q G +FS+M L PD T S+
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 151 LKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRK---------- 197
L C+ L ++ QIH G + +V +A++ +Y++CG V + R+
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 198 -----------------------IFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
IF S++++D W+++I GY + EA++ F+ M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+P+ + L++ L + L+ G Q+HG +K+G V++ L+T+YA G +
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 295 DAEKLFRRID-DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
A + F I ++D V+W SMI+A AQ G + +++L + + L+ T + +
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGH-AEEALELFETM-LMEGLRPDHITYVGVFS 523
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
+C + + GRQ ++ PTL S
Sbjct: 524 ACTHAGLVNQGRQYFDMMKDVDKIIPTL------------------------------SH 553
Query: 414 WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK-QFHVFA 472
++ ++ + + G+ EA E ++M E T SL +S+C I++GK
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSL---LSACRVHKNIDLGKVAAERLL 610
Query: 473 IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICGYAHHGQA 528
+ N Y S++ ++Y+ CG E++ K+ D +VK + G++ +
Sbjct: 611 LLEPENSGAY--SALANLYSACGKWEEAAKIRKSMKDGRVKKEQ--------GFSWI-EV 659
Query: 529 KQAIEIFTMLEKNGVTPNQ----VTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESE 584
K + +F + ++G P + +T + GY+ DT ++ + + K +
Sbjct: 660 KHKVHVFGV--EDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717
Query: 585 HYSCLVDAYG 594
H L A+G
Sbjct: 718 HSEKLAIAFG 727
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 176/597 (29%), Positives = 290/597 (48%), Gaps = 73/597 (12%)
Query: 162 QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNN 221
Q H K GA+ D +S+ ++ Y+ + + S+ + + +SS+I T
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 222 RGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVAS 281
+++ F M + PD HVL + + C E+ G Q+H +G D FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 282 VLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG------------------- 322
+ +Y G + DA K+F R+ DKD+V ++++ A+A+ G
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 323 ---------QGSSRS------MQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI 367
G +RS + + Q++H Q T+ ++L S + L GR I
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ-VTVSSVLPSVGDSEMLNMGRLI 274
Query: 368 HSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI------VC------------- 408
H V+K + V +A++ MY + G + F VC
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 409 ----------KDDS------SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC 452
K+ + SW+SII QNG + EALEL +EM G+ ++P
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 453 ISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNE 512
+ +C + A+ G+ H FA++ +V+VGS++IDMYAKCG + S+ VF+ N
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 513 VIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTL 572
V +N+++ G++ HG+AK+ + IF L + + P+ ++F ++LSAC G ++ F +
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 573 MLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTK 629
M +Y IKP EHYSC+V+ GRAG+L+EAY ++++ + W LL++CR NN
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 630 IGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ E +A+K+ L P + +Y+LLSNIY +G W E R KM G+KK+PG SW+
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 233/533 (43%), Gaps = 79/533 (14%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
Q H +++SG + D + + L+ YSN DA V + + + +++ +I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNC-FNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVV 178
F +FS M+ GL PD+ +L K C+ L QIH ++ G + DA V
Sbjct: 95 KLFTQSIGVFSRMFS-HGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKD-------------------------------- 206
+M +Y +CG + RK+FD M +KD
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 207 --NFV-WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
N V W+ I+SG+ + +EAV F+ + PDQ +SS L + + E LN G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRID------------------- 304
+HG +IK G D V S ++ +Y G + LF + +
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 305 -DK---------------DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATL 348
DK ++V+W S+I AQ G+ +++L +E+ + ++ T+
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK-DIEALELFREM-QVAGVKPNHVTI 391
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
++L +C N + L GR H ++ + VG+AL+ MY++CG+I + F +
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQ 467
K+ W+S++ + +G E + + + ++ + S +S+C Q+ + G K
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 468 FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNAMI 519
F + + + G + S ++++ + G ++++ + + +P+ ++ A++
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 213/505 (42%), Gaps = 84/505 (16%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P + ++++LI + +A ++ +F+ M P+ + L + CA + + VG
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
QIH V SGL+ D F S+ +MY G + DA VF + ++D+V + ++ +A+
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCG-RMGDARKVFDRMSDKDVVTCSALLCAYAR 194
Query: 121 VGDFCMVQRLFSEMWEVEGLK-----------------------------------PDNR 145
G V R+ SEM E G++ PD
Sbjct: 195 KGCLEEVVRILSEM-ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253
Query: 146 TFVSLLKCCS-----TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFD 200
T S+L +G + IHG K G D V SAM+D+Y K G V +F+
Sbjct: 254 TVSSVLPSVGDSEMLNMGRL--IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 201 SME-----------------------------------EKDNFVWSSIISGYTVNNRGEE 225
E E + W+SII+G N + E
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 226 AVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLT 285
A+ F++M VKP+ + S L AC I L G HG ++ ++ V S L+
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 286 LYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG 345
+YA G + ++ +F + K++V WNS++ + G+ + M + + L R T L+
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK-AKEVMSIFESLMR-TRLKPDF 489
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFV 404
+ ++L +C G + ++ + P L + +V++ G++ +A+
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 405 DIVCKDDSS-WSSIIGTYK-QNGME 427
++ + DS W +++ + + QN ++
Sbjct: 550 EMPFEPDSCVWGALLNSCRLQNNVD 574
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 193/695 (27%), Positives = 355/695 (51%), Gaps = 30/695 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M ++VVTW T++S + G A LF+DMR + + L+ A + +V
Sbjct: 161 MHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVC 220
Query: 61 LQIHGVLVRSGLERDKFAGSS-LVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
+HG++++ G FA SS L+ MY N ++L A VF ++ +D +W M++ +A
Sbjct: 221 RCLHGLVIKKGF---IFAFSSGLIDMYCN-CADLYAAESVFEEVWRKDESSWGTMMAAYA 276
Query: 120 QVGDFCMVQRLFSEM--WEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAV 177
G F V LF M ++V K + + L + + IH A + G D
Sbjct: 277 HNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS 336
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V+++++ +Y+KCG++ ++F ++E++D WS++I+ Y + +EA+ F+DM +
Sbjct: 337 VATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH 396
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
+KP+ L+S L+ C + G +H IK +++ A+ ++++YA G A
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPAL 456
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
K F R+ KD VA+N++ + Q+G ++++ + + + + + T++ +L++C
Sbjct: 457 KAFERLPIKDAVAFNALAQGYTQIGD-ANKAFDVYKNM-KLHGVCPDSRTMVGMLQTCAF 514
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC---KDDSSW 414
SD G ++ ++K V +AL++M+++C + A F C K SW
Sbjct: 515 CSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDK--CGFEKSTVSW 572
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+ ++ Y +G EA+ ++M E + + + + ++L A+ VG H I+
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQ 632
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
G+ VG+S++DMYAKCG +E S+K F V +N M+ YA HG A A+ +
Sbjct: 633 CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSL 692
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
F +++N + P+ V+FL++LSAC HAG +E+ +F M ++KI+ E EHY+C+VD G
Sbjct: 693 FLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLG 752
Query: 595 RAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYIL 651
+AG EA +++++ S W LL++ R H N + + ++++L P + + Y
Sbjct: 753 KAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY-- 810
Query: 652 LSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ R E + +KK P SW+
Sbjct: 811 -----------SQDRRLGEVNNVSRIKKVPACSWI 834
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 185/680 (27%), Positives = 344/680 (50%), Gaps = 21/680 (3%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER---PNEYTFSVLLRACATPALWNVGLQ 62
VV W ++I + RAG +A F M +E+ P++Y+F+ L+ACA + GL+
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMS--EEKGIDPDKYSFTFALKACAGSMDFKKGLR 121
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
IH ++ GLE D + G++LV MY +L A VF + +D+V WN M+SG AQ G
Sbjct: 122 IHDLIAEMGLESDVYIGTALVEMYC-KARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL--GEVMQ-IHGLASKFGAETDAVVS 179
LF +M + D+ + +L+ S L +V + +HGL K G S
Sbjct: 181 CSSAALLLFHDMRSC-CVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG--FIFAFS 237
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
S ++D+Y C D+ + +F+ + KD W ++++ Y N EE + F M V+
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
++ +S L+A + DL G+ +H ++ G D VA+ L+++Y+ G L AE+L
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 300 FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKS 359
F I+D+D+V+W++MI ++ Q GQ ++ L +++ R ++ TL ++L+ C +
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQ-HDEAISLFRDMMR-IHIKPNAVTLTSVLQGCAGVA 415
Query: 360 DLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIG 419
G+ IH +K+ + A++ MY++CG+ A KAF + KD +++++
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 420 TYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH 479
Y Q G ++A ++ K M G+ S ++ + +C+ G + IK G++
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVFD-AQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML 538
+ +V ++I+M+ KC + + +FD + + V +N M+ GY HGQA++A+ F +
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Query: 539 EKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGR 598
+ PN VTF+ ++ A + + +++ + L + ++ + LVD Y + G
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHS-SLIQCGFCSQTPVGNSLVDMYAKCGM 654
Query: 599 LEEAYQIVQKDGSE--SAWRTLLSACRNHN--NTKIGEKSAKKMIELNPSDHASYILLSN 654
+E + + + ++ +W T+LSA H + + + + EL P D S++ + +
Sbjct: 655 IESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKP-DSVSFLSVLS 713
Query: 655 IYIEEGKWEEARDCREKMAK 674
G EE + E+M +
Sbjct: 714 ACRHAGLVEEGKRIFEEMGE 733
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 164/611 (26%), Positives = 293/611 (47%), Gaps = 28/611 (4%)
Query: 39 PNEYT-FSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYS-NNGSNLRDA 96
P YT ++LR C + LQ+HG L+ SGL+ + L+ YS +L
Sbjct: 2 PINYTNLLLMLRECKN---FRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRV 54
Query: 97 CCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS- 155
+F + + +V WN MI G+ + G F M E +G+ PD +F LK C+
Sbjct: 55 --IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAG 112
Query: 156 --TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSI 213
+ ++IH L ++ G E+D + +A+V++Y K D+ S R++FD M KD W+++
Sbjct: 113 SMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTM 172
Query: 214 ISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH 273
+SG N A+ F DM V D L + + A ++E + +HG +IK G
Sbjct: 173 VSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG- 231
Query: 274 QNDCFV---ASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQ 330
F+ +S L+ +Y N L AE +F + KD +W +M+ A+A G +
Sbjct: 232 ----FIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAH--NGFFEEVL 285
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMY 390
L +L R +++ + L++ DL G IH ++ + V +L+ MY
Sbjct: 286 ELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMY 345
Query: 391 SECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLP 450
S+CG++ A + F++I +D SWS++I +Y+Q G EA+ L ++M+ I + +L
Sbjct: 346 SKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLT 405
Query: 451 LCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKP 510
+ C+ + A +GK H +AIK+ ++ +++I MYAKCG + K F+
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Query: 511 NEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLF 570
+ V +NA+ GY G A +A +++ ++ +GV P+ T + ML C+ ++
Sbjct: 466 DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVY 525
Query: 571 TLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNN 627
++ K+ E L++ + + L A + K G E +W +++ H
Sbjct: 526 GQII-KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ 584
Query: 628 TKIGEKSAKKM 638
+ + ++M
Sbjct: 585 AEEAVATFRQM 595
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/590 (30%), Positives = 301/590 (51%), Gaps = 55/590 (9%)
Query: 142 PDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKI 198
P+ TF LLK C+ LG+V+Q +H K G D ++A+V +Y K V+ K+
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 199 FDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDL 258
D M E+ ++ +SG N +A F D + ++S L C +IE
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG- 147
Query: 259 NTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAH 318
G+Q+H +K+G + + +V + L+++Y+ G A ++F ++ K +V +N+ I
Sbjct: 148 --GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 319 AQLGQGSSRSMQLLQE----LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS 374
+ G M L+ + + +S + T + + +C + +L GRQ+H LVMK
Sbjct: 206 MENG-----VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKK 260
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDI---------------------------- 406
T+VG AL+ MYS+C A+ F ++
Sbjct: 261 EFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVEL 320
Query: 407 --------VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
+ D ++W+S+I + Q G EA + + ML+ + + L +S+CS
Sbjct: 321 FEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSD 380
Query: 459 LLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVKPNE-VIYN 516
+ + GK+ H IK+ D++V +S+IDMY KCG ++++FD + KP + V +N
Sbjct: 381 IWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWN 440
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
MI GY HG+ + AIEIF +L + V P+ TF A+LSACSH G +E +F LM +
Sbjct: 441 VMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEE 500
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK--DGSESAWRTLLSACRNHNNTKIGEKS 634
Y KP +EH C++D GR+GRL EA +++ + + S S + +LL +CR H + +GE++
Sbjct: 501 YGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEA 560
Query: 635 AKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
A K+ EL P + A +++LS+IY +WE+ R+ + + + K PG S
Sbjct: 561 AMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 202/421 (47%), Gaps = 47/421 (11%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R + + +S L G AF++F D RV N T + +L C G
Sbjct: 92 MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---IEGG 148
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+Q+H + ++SG E + + G+SLV MYS G + A +F + + +V +N ISG +
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVL-AARMFEKVPHKSVVTYNAFISGLME 207
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAV 177
G +V +F+ M + +P++ TFV+ + C++L + Q+HGL K + + +
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV-WSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V +A++D+Y+KC S +F +++ N + W+S+ISG +N + E AV F+ + +
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSE 327
Query: 237 RVKPDQHV-----------------------------------LSSTLRACVEIEDLNTG 261
+KPD L+S L AC +I L G
Sbjct: 328 GLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNG 387
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRID--DKDIVAWNSMILAHA 319
++HG +IK + D FV + L+ +Y G A ++F R + KD V WN MI +
Sbjct: 388 KEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYG 447
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHP 379
+ G+ S ++++ EL R ++ AT A+L +C + ++ G QI L+ + P
Sbjct: 448 KHGECES-AIEIF-ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKP 505
Query: 380 T 380
+
Sbjct: 506 S 506
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/515 (25%), Positives = 235/515 (45%), Gaps = 50/515 (9%)
Query: 34 VMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNL 93
++ PN++TF LL++CA G +H +V++G D F ++LV MY +
Sbjct: 24 ILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKV-KQV 82
Query: 94 RDACCVFHDLLERDLVAWNVMISGFAQVGDFCM-VQRLFSEMWEVEGLKPDNRTFVSLLK 152
DA V ++ ER + + N +SG + G FC R+F + V G ++ T S+L
Sbjct: 83 TDALKVLDEMPERGIASVNAAVSGLLENG-FCRDAFRMFGDA-RVSGSGMNSVTVASVLG 140
Query: 153 CCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSS 212
C + MQ+H LA K G E + V +++V +Y++CG+ ++F+ + K +++
Sbjct: 141 GCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNA 200
Query: 213 IISGYTVNNRGEEAVHFFKDMCK-QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
ISG N F M K +P+ + + AC + +L G Q+HG ++K
Sbjct: 201 FISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKK 260
Query: 272 GHQNDCFVASVLLTLYAN----------FGGLRD----------------------AEKL 299
Q + V + L+ +Y+ F L+D A +L
Sbjct: 261 EFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVEL 320
Query: 300 FRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGAT--LIAILK 353
F ++D + D WNS+I +QLG + ++ + R S+ + + L ++L
Sbjct: 321 FEKLDSEGLKPDSATWNSLISGFSQLG----KVIEAFKFFERMLSVVMVPSLKCLTSLLS 376
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF--VDIVCKDD 411
+C + L G++IH V+K++ V +L+ MY +CG A + F + KD
Sbjct: 377 ACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDP 436
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHV 470
W+ +I Y ++G A+E+ + + E + + + +S+CS + G Q F +
Sbjct: 437 VFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRL 496
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD 505
+ GY +ID+ + G + ++K+V D
Sbjct: 497 MQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVID 531
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNV--GLQIHG 65
TW +LIS + G V +AF+ F M + P+ + LL AC+ +W + G +IHG
Sbjct: 335 TWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSD--IWTLKNGKEIHG 392
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE---RDLVAWNVMISGFAQVG 122
++++ ERD F +SL+ MY G L D E +D V WNVMISG+ + G
Sbjct: 393 HVIKAAAERDIFVLTSLIDMYMKCG--LSSWARRIFDRFEPKPKDPVFWNVMISGYGKHG 450
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGL-ASKFGAETDAVV 178
+ +F E+ E ++P TF ++L CS G V QI L ++G +
Sbjct: 451 ECESAIEIF-ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEH 509
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSM 202
M+DL + G + +++ D M
Sbjct: 510 IGCMIDLLGRSGRLREAKEVIDQM 533
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 188/666 (28%), Positives = 328/666 (49%), Gaps = 49/666 (7%)
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERD-----LVAWNVMISG 117
H L + GL+ D + LV G+ R++ ++ E +N +I G
Sbjct: 51 FHRSLTKQGLDNDVSTITKLVARSCELGT--RESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAET 174
+A G LF M G+ PD TF L C+ G +QIHGL K G
Sbjct: 109 YASSGLCNEAILLFLRMMN-SGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
D V +++V YA+CG++ S RK+FD M E++ W+S+I GY + ++AV F M
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 235 K-QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
+ + V P+ + + AC ++EDL TG +V+ + +G + + + S L+ +Y +
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
A++LF ++ N+M A + QG +R + L + ++ ++++ +
Sbjct: 288 DVAKRLFDEYGASNLDLCNAM--ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
SC ++ G+ H V+++ + NAL+ MY +C + AF+ F + K +
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 414 WSSIIGTYKQNG-------------------------------MESEALEL-CKEMLAEG 441
W+SI+ Y +NG + EA+E+ C EG
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 442 ITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSK 501
+ ++ S+C L A+++ K + + K+G DV +G++++DM+++CG E +
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 502 KVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG 561
+F++ + + A I A G A++AIE+F + + G+ P+ V F+ L+ACSH G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 562 YIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTL 618
++ +F ML + + PE HY C+VD GRAG LEEA Q+++ + ++ W +L
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 619 LSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVK 678
L+ACR N ++ +A+K+ L P SY+LLSN+Y G+W + R M + G++
Sbjct: 646 LAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLR 705
Query: 679 KDPGSS 684
K PG+S
Sbjct: 706 KPPGTS 711
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/562 (24%), Positives = 272/562 (48%), Gaps = 44/562 (7%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDE--RPNEYTFSVLLRACATPALWNVGLQIHGV 66
+ +LI + +G +A LF +R+M+ P++YTF L ACA G+QIHG+
Sbjct: 102 YNSLIRGYASSGLCNEAILLF--LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCM 126
+V+ G +D F +SLV+ Y+ G L A VF ++ ER++V+W MI G+A+ DF
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGE-LDSARKVFDEMSERNVVSWTSMICGYAR-RDFAK 217
Query: 127 -VQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAM 182
LF M E + P++ T V ++ C+ L ++ +++ G E + ++ SA+
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 183 VDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQ 242
VD+Y KC + +++FD + + +++ S Y EA+ F M V+PD+
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 243 HVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRR 302
+ S + +C ++ ++ G HG +++NG ++ + + L+ +Y A ++F R
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 303 IDDKDIVAWNSMILAHAQLG----------------------------QGS--SRSMQLL 332
+ +K +V WNS++ + + G QGS ++++
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 333 QELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSE 392
+ + G T+++I +C + L + I+ + K+ + +G LV M+S
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 393 CGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC 452
CG A F + +D S+W++ IG G A+EL +M+ +G+ +
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 453 ISSCSQLLAINVGKQ--FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVK 509
+++CS + GK+ + + + DV+ G ++D+ + G +E++ ++ D ++
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 510 PNEVIYNAMICGYAHHGQAKQA 531
PN+VI+N+++ G + A
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMA 658
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 234/505 (46%), Gaps = 40/505 (7%)
Query: 149 SLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCG---DVSSCRKIFDSMEEK 205
S LK C T+ E+ H +K G + D + +V + G +S +++F++ E
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 206 DN-FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
F+++S+I GY + EA+ F M + PD++ L AC + G+Q+
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
HG ++K G+ D FV + L+ YA G L A K+F + ++++V+W SMI +A+
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR-DF 215
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
+ ++ L + R + T++ ++ +C DL G ++++ + S + L+ +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
ALV MY +C I A + F + + +++ Y + G+ EAL + M+ G+
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
S+ ISSCSQL I GK H + +++G+ + +++IDMY KC + + ++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIF-TMLEKN---------------------- 541
D V +N+++ GY +G+ A E F TM EKN
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 542 ---------GVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA 592
GV + VT +++ SAC H G + D + K I+ + + LVD
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGAL-DLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 593 YGRAGRLEEAYQIVQK--DGSESAW 615
+ R G E A I + SAW
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAW 539
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 206/464 (44%), Gaps = 44/464 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER--PNEYTFSVLLRACATPALWN 58
M RNVV+WT++I + R A LF M V DE PN T ++ ACA
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLE 253
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
G +++ + SG+E + S+LV MY + + A +F + +L N M S +
Sbjct: 254 TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA-IDVAKRLFDEYGASNLDLCNAMASNY 312
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETD 175
+ G +F+ M + G++PD + +S + CS L ++ HG + G E+
Sbjct: 313 VRQGLTREALGVFNLMMD-SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 176 AVVSSAMVDLYAKC-------------------------------GDVSSCRKIFDSMEE 204
+ +A++D+Y KC G+V + + F++M E
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR-VKPDQHVLSSTLRACVEIEDLNTGVQ 263
K+ W++IISG + EEA+ F M Q V D + S AC + L+
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ 323
++ + KNG Q D + + L+ +++ G A +F + ++D+ AW + + +
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW-TAAIGAMAMAG 550
Query: 324 GSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI-HSLVMKSSVSHPTLV 382
+ R+++L ++ L+ G + L +C + + G++I +S++ VS +
Sbjct: 551 NAERAIELFDDMIE-QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 383 GNALVHMYSECGQIGDAFKAFVDIVCK-DDSSWSSIIGTYKQNG 425
+V + G + +A + D+ + +D W+S++ + G
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
MP +N+V+W T+IS ++ +A ++F M+ + + T + AC ++
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
I+ + ++G++ D G++LV M+S G + A +F+ L RD+ AW I A
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG-DPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETD 175
G+ LF +M E +GLKPD FV L CS G V Q + + G +
Sbjct: 548 MAGNAERAIELFDDMIE-QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 606
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGEEAVH 228
V MVDL + G + ++ + M E ++ +W+S+++ V E A +
Sbjct: 607 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAY 660
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 197/695 (28%), Positives = 333/695 (47%), Gaps = 96/695 (13%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M +R++V+W +IS++ G + KA+Q+F++M V
Sbjct: 76 MSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV-------------------------- 109
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
R + ++++ N +L A +F D+ E++ V++ MI+GF +
Sbjct: 110 -------------RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVR 156
Query: 121 VGDFCMVQRLFSEM-WEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS 179
G F + L++E + N L+ V G+A K + V
Sbjct: 157 AGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVK-----EVVSC 211
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ-RV 238
S+MV Y K G + R +FD M E++ W+++I GY E+ F M ++ V
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK 298
K + + L+ +AC + G Q+HG + + + D F+ + L+++Y+ G + +A+
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 299 LFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
+F + +KD V+WNS+I Q Q S + +L +++ G +++
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQ-ISEAYELFEKM--------PGKDMVSW------- 375
Query: 359 SDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII 418
+D+ G +S G+I + F + KD+ +W+++I
Sbjct: 376 TDMIKG-------------------------FSGKGEISKCVELFGMMPEKDNITWTAMI 410
Query: 419 GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN 478
+ NG EAL +ML + + SY+ +S+ + L + G Q H +K
Sbjct: 411 SAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIV 470
Query: 479 HDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML 538
+D+ V +S++ MY KCG+ D+ K+F +PN V YN MI GY+++G K+A+++F+ML
Sbjct: 471 NDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSML 530
Query: 539 EKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGR 598
E +G PN VTFLA+LSAC H GY++ F M Y I+P +HY+C+VD GR+G
Sbjct: 531 ESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGL 590
Query: 599 LEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNI 655
L++A ++ W +LLSA + H + E +AKK+IEL P Y++LS +
Sbjct: 591 LDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQL 650
Query: 656 YIEEGKWEEARDCREKM---AKTGVKKDPGSSWLI 687
Y GK RDC M +KKDPGSSW+I
Sbjct: 651 YSIIGK---NRDCDRIMNIKKSKRIKKDPGSSWII 682
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 122/273 (44%), Gaps = 27/273 (9%)
Query: 362 PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTY 421
P ++ + + ++ S N+ + ++ G + +A F + + SW ++I Y
Sbjct: 32 PITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAY 91
Query: 422 KQNGMESEALELCKEMLAEGIT-FTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD 480
+NG S+A ++ EM T + + + + C ++GK + +F N
Sbjct: 92 AENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKC------DLGKAYELFCDIPEKNAV 145
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVF-DAQVK-PNEVIYNAMICGYAHHGQAKQAIEIFTML 538
Y +++I + + G ++++ ++ + VK + V N ++ GY G+ +A+ +F +
Sbjct: 146 SY--ATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGM 203
Query: 539 EKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGR 598
V V+ +M+ G I D +LF M + I ++ ++D Y +AG
Sbjct: 204 AVKEV----VSCSSMVHGYCKMGRIVDARSLFDRMTERNVIT-----WTAMIDGYFKAGF 254
Query: 599 LEEAYQI---VQKDG----SESAWRTLLSACRN 624
E+ + + ++++G + + + ACR+
Sbjct: 255 FEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 188/666 (28%), Positives = 328/666 (49%), Gaps = 49/666 (7%)
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERD-----LVAWNVMISG 117
H L + GL+ D + LV G+ R++ ++ E +N +I G
Sbjct: 51 FHRSLTKQGLDNDVSTITKLVARSCELGT--RESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAET 174
+A G LF M G+ PD TF L C+ G +QIHGL K G
Sbjct: 109 YASSGLCNEAILLFLRMMN-SGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
D V +++V YA+CG++ S RK+FD M E++ W+S+I GY + ++AV F M
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 235 K-QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
+ + V P+ + + AC ++EDL TG +V+ + +G + + + S L+ +Y +
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
A++LF ++ N+M A + QG +R + L + ++ ++++ +
Sbjct: 288 DVAKRLFDEYGASNLDLCNAM--ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
SC ++ G+ H V+++ + NAL+ MY +C + AF+ F + K +
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 414 WSSIIGTYKQNG-------------------------------MESEALEL-CKEMLAEG 441
W+SI+ Y +NG + EA+E+ C EG
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 442 ITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSK 501
+ ++ S+C L A+++ K + + K+G DV +G++++DM+++CG E +
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 502 KVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG 561
+F++ + + A I A G A++AIE+F + + G+ P+ V F+ L+ACSH G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 562 YIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTL 618
++ +F ML + + PE HY C+VD GRAG LEEA Q+++ + ++ W +L
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 619 LSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVK 678
L+ACR N ++ +A+K+ L P SY+LLSN+Y G+W + R M + G++
Sbjct: 646 LAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLR 705
Query: 679 KDPGSS 684
K PG+S
Sbjct: 706 KPPGTS 711
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/562 (24%), Positives = 272/562 (48%), Gaps = 44/562 (7%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDE--RPNEYTFSVLLRACATPALWNVGLQIHGV 66
+ +LI + +G +A LF +R+M+ P++YTF L ACA G+QIHG+
Sbjct: 102 YNSLIRGYASSGLCNEAILLF--LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCM 126
+V+ G +D F +SLV+ Y+ G L A VF ++ ER++V+W MI G+A+ DF
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGE-LDSARKVFDEMSERNVVSWTSMICGYAR-RDFAK 217
Query: 127 -VQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAM 182
LF M E + P++ T V ++ C+ L ++ +++ G E + ++ SA+
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 183 VDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQ 242
VD+Y KC + +++FD + + +++ S Y EA+ F M V+PD+
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 243 HVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRR 302
+ S + +C ++ ++ G HG +++NG ++ + + L+ +Y A ++F R
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 303 IDDKDIVAWNSMILAHAQLG----------------------------QGS--SRSMQLL 332
+ +K +V WNS++ + + G QGS ++++
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 333 QELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSE 392
+ + G T+++I +C + L + I+ + K+ + +G LV M+S
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 393 CGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC 452
CG A F + +D S+W++ IG G A+EL +M+ +G+ +
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 453 ISSCSQLLAINVGKQ--FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVK 509
+++CS + GK+ + + + DV+ G ++D+ + G +E++ ++ D ++
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 510 PNEVIYNAMICGYAHHGQAKQA 531
PN+VI+N+++ G + A
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMA 658
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 234/505 (46%), Gaps = 40/505 (7%)
Query: 149 SLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCG---DVSSCRKIFDSMEEK 205
S LK C T+ E+ H +K G + D + +V + G +S +++F++ E
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 206 DN-FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
F+++S+I GY + EA+ F M + PD++ L AC + G+Q+
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
HG ++K G+ D FV + L+ YA G L A K+F + ++++V+W SMI +A+
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR-DF 215
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
+ ++ L + R + T++ ++ +C DL G ++++ + S + L+ +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
ALV MY +C I A + F + + +++ Y + G+ EAL + M+ G+
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
S+ ISSCSQL I GK H + +++G+ + +++IDMY KC + + ++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIF-TMLEKN---------------------- 541
D V +N+++ GY +G+ A E F TM EKN
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 542 ---------GVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA 592
GV + VT +++ SAC H G + D + K I+ + + LVD
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGAL-DLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 593 YGRAGRLEEAYQIVQK--DGSESAW 615
+ R G E A I + SAW
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAW 539
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 206/464 (44%), Gaps = 44/464 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER--PNEYTFSVLLRACATPALWN 58
M RNVV+WT++I + R A LF M V DE PN T ++ ACA
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLE 253
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
G +++ + SG+E + S+LV MY + + A +F + +L N M S +
Sbjct: 254 TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA-IDVAKRLFDEYGASNLDLCNAMASNY 312
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETD 175
+ G +F+ M + G++PD + +S + CS L ++ HG + G E+
Sbjct: 313 VRQGLTREALGVFNLMMD-SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 176 AVVSSAMVDLYAKC-------------------------------GDVSSCRKIFDSMEE 204
+ +A++D+Y KC G+V + + F++M E
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR-VKPDQHVLSSTLRACVEIEDLNTGVQ 263
K+ W++IISG + EEA+ F M Q V D + S AC + L+
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ 323
++ + KNG Q D + + L+ +++ G A +F + ++D+ AW + + +
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW-TAAIGAMAMAG 550
Query: 324 GSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI-HSLVMKSSVSHPTLV 382
+ R+++L ++ L+ G + L +C + + G++I +S++ VS +
Sbjct: 551 NAERAIELFDDMIE-QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 383 GNALVHMYSECGQIGDAFKAFVDIVCK-DDSSWSSIIGTYKQNG 425
+V + G + +A + D+ + +D W+S++ + G
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
MP +N+V+W T+IS ++ +A ++F M+ + + T + AC ++
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
I+ + ++G++ D G++LV M+S G + A +F+ L RD+ AW I A
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG-DPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETD 175
G+ LF +M E +GLKPD FV L CS G V Q + + G +
Sbjct: 548 MAGNAERAIELFDDMIE-QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 606
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGEEAVH 228
V MVDL + G + ++ + M E ++ +W+S+++ V E A +
Sbjct: 607 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAY 660
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 298/549 (54%), Gaps = 13/549 (2%)
Query: 147 FVSLLKCCS---TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
++ LK CS +++ IHG + G ++ + ++DLY K GDV RK+FD +
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 74
Query: 204 EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
++D W+++IS ++ +A+ FK+M ++ VK +Q S L++C ++ L G+Q
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ 323
+HG + K + V S LL+LYA G + +A F + ++D+V+WN+MI +
Sbjct: 135 IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA-NA 193
Query: 324 GSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG 383
+ S L Q L T + T ++L++ L ++H L +K + +
Sbjct: 194 CADTSFSLFQ-LMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI 252
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII-GTYKQNGMESEALELCKEMLAEGI 442
+LV+ Y +CG + +A+K +D S +++I G +QN S+A ++ K+M+
Sbjct: 253 RSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKT 312
Query: 443 TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSG-YNHDVYVGSSIIDMYAKCGHMEDSK 501
+ + C+ + ++ +G+Q H FA+KS DV +G+S+IDMYAK G +ED+
Sbjct: 313 KMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAV 372
Query: 502 KVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG 561
F+ + + + ++I GY HG ++AI+++ +E + PN VTFL++LSACSH G
Sbjct: 373 LAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTG 432
Query: 562 YIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ-KDG----SESAWR 616
E ++ M+ K+ I+ EH SC++D R+G LEEAY +++ K+G S S W
Sbjct: 433 QTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWG 492
Query: 617 TLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTG 676
L ACR H N ++ + +A +++ + P +YI L+++Y G W+ A + R+ M ++G
Sbjct: 493 AFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Query: 677 -VKKDPGSS 684
K PG S
Sbjct: 553 SCNKAPGYS 561
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 153/535 (28%), Positives = 262/535 (48%), Gaps = 14/535 (2%)
Query: 48 LRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERD 107
L+ C+ + L IHG + +G + L+ +Y G +++ A +F + +RD
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQG-DVKHARKLFDRISKRD 77
Query: 108 LVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIH 164
+V+W MIS F++ G LF EM E +K + T+ S+LK C LG E MQIH
Sbjct: 78 VVSWTAMISRFSRCGYHPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKEGMQIH 136
Query: 165 GLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGE 224
G K + +V SA++ LYA+CG + R FDSM+E+D W+++I GYT N +
Sbjct: 137 GSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACAD 196
Query: 225 EAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL 284
+ F+ M + KPD S LRA + ++ L ++HG IK G + L+
Sbjct: 197 TSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLV 256
Query: 285 TLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQ 344
Y G L +A KL +D+++ ++I +Q +S + + +++ R + ++
Sbjct: 257 NAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKT-KMD 315
Query: 345 GATLIAILKSCKNKSDLPAGRQIHSLVMKSS-VSHPTLVGNALVHMYSECGQIGDAFKAF 403
+ ++LK C + + GRQIH +KSS + +GN+L+ MY++ G+I DA AF
Sbjct: 316 EVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF 375
Query: 404 VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
++ KD SW+S+I Y ++G +A++L M E I + +S+CS
Sbjct: 376 EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTE 435
Query: 464 VG-KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ---VKPNEVIYNAMI 519
+G K + K G S IIDM A+ G++E++ + ++ V + + A +
Sbjct: 436 LGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFL 495
Query: 520 CGYAHHGQAKQAIEIFTMLEKNGVTPNQ-VTFLAMLSACSHAGYIEDTLNLFTLM 573
HG + + T L + P + V ++ + S + G ++ LN LM
Sbjct: 496 DACRRHGNVQLSKVAATQLL--SMEPRKPVNYINLASVYAANGAWDNALNTRKLM 548
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 223/438 (50%), Gaps = 21/438 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+ R+VV+WT +IS R G P A LF +M D + N++T+ +L++C G
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 132
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+QIHG + + + S+L+ +Y+ G + +A F + ERDLV+WN MI G+
Sbjct: 133 MQIHGSVEKGNCAGNLIVRSALLSLYARCG-KMEEARLQFDSMKERDLVSWNAMIDGYTA 191
Query: 121 VG----DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC---CSTLGEVMQIHGLASKFGAE 173
F + Q + + EG KPD TF SLL+ L V ++HGLA K G
Sbjct: 192 NACADTSFSLFQLMLT-----EGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFG 246
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYT-VNNRGEEAVHFFKD 232
+ + ++V+ Y KCG +++ K+ + +++D +++I+G++ NN +A FKD
Sbjct: 247 RSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKD 306
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH-QNDCFVASVLLTLYANFG 291
M + + K D+ V+SS L+ C I + G Q+HG +K+ + D + + L+ +YA G
Sbjct: 307 MIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSG 366
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
+ DA F + +KD+ +W S+I + + G +++ L + ++ T +++
Sbjct: 367 EIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGN-FEKAIDLYNRMEH-ERIKPNDVTFLSL 424
Query: 352 LKSCKNKSDLPAGRQIH-SLVMKSSVSHPTLVGNALVHMYSECGQIGDAF---KAFVDIV 407
L +C + G +I+ +++ K + + ++ M + G + +A+ ++ IV
Sbjct: 425 LSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIV 484
Query: 408 CKDDSSWSSIIGTYKQNG 425
S+W + + +++G
Sbjct: 485 SLSSSTWGAFLDACRRHG 502
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 180/618 (29%), Positives = 301/618 (48%), Gaps = 73/618 (11%)
Query: 95 DACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
+A VF + V++N MISG+ + G+F + ++LF EM E + L N ++
Sbjct: 82 EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERD-LVSWNVMIKGYVRN- 139
Query: 155 STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSII 214
LG+ ++ + E D + M+ YA+ G V R +FD M EK++ W++++
Sbjct: 140 RNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALL 195
Query: 215 SGYTVNNRGEEAVHFFKDM---------C--------KQRVKPDQHVLSSTLRACVEIED 257
S Y N++ EEA FK C K+ V+ Q S +R V
Sbjct: 196 SAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNT 255
Query: 258 LNTGVQVHG------QMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAW 311
+ TG G Q+ D F + +++ Y + +A +LF ++ +++ V+W
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSW 315
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV 371
N+M+ + Q M++ +EL C+N S
Sbjct: 316 NAMLAGYVQ-----GERMEMAKELFDVMP--------------CRNVS------------ 344
Query: 372 MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEAL 431
N ++ Y++CG+I +A F + +D SW+++I Y Q+G EAL
Sbjct: 345 ----------TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394
Query: 432 ELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMY 491
L +M EG S +S+C+ ++A+ +GKQ H +K GY +VG++++ MY
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 492 AKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFL 551
KCG +E++ +F + V +N MI GY+ HG + A+ F +++ G+ P+ T +
Sbjct: 455 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 552 AMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK--- 608
A+LSACSH G ++ F M Y + P S+HY+C+VD GRAG LE+A+ +++
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 574
Query: 609 DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDC 668
+ + W TLL A R H NT++ E +A K+ + P + Y+LLSN+Y G+W +
Sbjct: 575 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 634
Query: 669 REKMAKTGVKKDPGSSWL 686
R +M GVKK PG SW+
Sbjct: 635 RVRMRDKGVKKVPGYSWI 652
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/552 (24%), Positives = 261/552 (47%), Gaps = 41/552 (7%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP + V++ +IS +LR G A +LF++M D +++V+++ N
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERD----LVSWNVMIKGYVR----NRN 141
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
L L ERD + ++++ Y+ NG + DA VF + E++ V+WN ++S + Q
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGC-VDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 121 ---VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAV 177
+ + CM+ + E W + ++ LL ++++ D V
Sbjct: 201 NSKMEEACMLFKS-RENWALV-------SWNCLLGGFVKKKKIVEARQFFDSMNVR-DVV 251
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
+ ++ YA+ G + R++FD +D F W++++SGY N EEA F M
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM---- 307
Query: 238 VKPDQHVLS--STLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
P+++ +S + L V+ E + ++ M + + ++T YA G + +
Sbjct: 308 --PERNEVSWNAMLAGYVQGERMEMAKELFDVM----PCRNVSTWNTMITGYAQCGKISE 361
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A+ LF ++ +D V+W +MI ++Q G S +++L ++ R ++ ++ + L +C
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGH-SFEALRLFVQMEREGG-RLNRSSFSSALSTC 419
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+ L G+Q+H ++K VGNAL+ MY +CG I +A F ++ KD SW+
Sbjct: 420 ADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWN 479
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIK 474
++I Y ++G AL + M EG+ ++ +S+CS ++ G+Q F+
Sbjct: 480 TMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD 539
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNAMICGYAHHGQAK---- 529
G + + ++D+ + G +ED+ + + +P+ I+ ++ HG +
Sbjct: 540 YGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAET 599
Query: 530 QAIEIFTMLEKN 541
A +IF M +N
Sbjct: 600 AADKIFAMEPEN 611
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 216/476 (45%), Gaps = 39/476 (8%)
Query: 186 YAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVL 245
Y + G + ++F M + ++ +ISGY N E A F +M P++ ++
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM------PERDLV 127
Query: 246 SSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD 305
S + + + N G ++ + + D + +L+ YA G + DA +F R+ +
Sbjct: 128 SWNVMIKGYVRNRNLGKAR--ELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 306 KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGR 365
K+ V+WN+++ A+ Q + M L + +L L +K K + R
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACM--LFKSRENWALVSWNCLLGGFVK----KKKIVEAR 239
Query: 366 QIH-SLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQN 424
Q S+ ++ VS N ++ Y++ G+I +A + F + +D +W++++ Y QN
Sbjct: 240 QFFDSMNVRDVVSW-----NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN 294
Query: 425 GMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSGYNHDVYV 483
M EA EL +M S ++ Q + + K+ F V + +V
Sbjct: 295 RMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVST 345
Query: 484 GSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGV 543
+++I YA+CG + ++K +FD K + V + AMI GY+ G + +A+ +F +E+ G
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 544 TPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY--SCLVDAYGRAGRLEE 601
N+ +F + LS C+ +E L ++ K E+ + + L+ Y + G +EE
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLV---KGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 602 AYQIVQKDGSES--AWRTLLSACRNHNNTKIGEKSAKKMIE--LNPSDHASYILLS 653
A + ++ + +W T+++ H ++ + + M L P D +LS
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/579 (29%), Positives = 289/579 (49%), Gaps = 42/579 (7%)
Query: 149 SLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
SLL C + + Q+H G E +V+ +V Y+ + + I ++ +
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDIL 107
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
W+ +I+ Y N EE + +K M + ++PD S L+AC E D+ G VH
Sbjct: 108 HPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVH 167
Query: 266 GQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGS 325
G + + +++ +V + L+++Y F + A +LF R+ ++D V+WN++I +A G S
Sbjct: 168 GSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 326 SRSMQLLQEL----------------------------------HRTTSLQIQGATLIAI 351
+ +L ++ R + +I
Sbjct: 228 -EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG 286
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
LK+C + G++IH L + SS V N L+ MYS+C + A F
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
+W+SII Y Q EA L +EML G S +L + C+++ + GK+FH +
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 472 AIKSGYNHD-VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQ 530
++ D + +S++D+YAK G + +K+V D K +EV Y ++I GY + G+
Sbjct: 407 ILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGV 466
Query: 531 AIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLV 590
A+ +F + ++G+ P+ VT +A+LSACSH+ + + LF M +Y I+P +H+SC+V
Sbjct: 467 ALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMV 526
Query: 591 DAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHA 647
D YGRAG L +A I+ S + W TLL+AC H NT+IG+ +A+K++E+ P +
Sbjct: 527 DLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPG 586
Query: 648 SYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
Y+L++N+Y G W + + R M GVKKDPG +W+
Sbjct: 587 YYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWI 625
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 147/601 (24%), Positives = 263/601 (43%), Gaps = 81/601 (13%)
Query: 20 GSVPKAFQLFNDMRVMDERPNE-----YTFSVLLRACATPALWNVGLQIHGVLVRSGLER 74
G + AF+ F+ +R+ ++ + LL AC + G+Q+H + SG+E
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEY 76
Query: 75 DKFAGSSLVYMYS-----NNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQR 129
LV YS N ++ + + H L WNV+I+ +A+ F V
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPL------PWNVLIASYAKNELFEEVIA 130
Query: 130 LFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQI------HGLASKFGAETDAVVSSAMV 183
+ M +G++PD T+ S+LK C GE + + HG ++ V +A++
Sbjct: 131 AYKRMVS-KGIRPDAFTYPSVLKAC---GETLDVAFGRVVHGSIEVSSYKSSLYVCNALI 186
Query: 184 DLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM---------- 233
+Y + ++ R++FD M E+D W+++I+ Y EA F M
Sbjct: 187 SMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVI 246
Query: 234 --------CKQ--------------RVKP---DQHVLSSTLRACVEIEDLNTGVQVHGQM 268
C Q R P D + L+AC I + G ++HG
Sbjct: 247 TWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLA 306
Query: 269 IKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRS 328
I + + V + L+T+Y+ LR A +FR+ ++ + WNS+I +AQL + S +
Sbjct: 307 IHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK-SEEA 365
Query: 329 MQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS-VSHPTLVGNALV 387
LL+E+ Q TL +IL C ++L G++ H +++ T++ N+LV
Sbjct: 366 SHLLREM-LVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLV 424
Query: 388 HMYSECGQIGDAFKAFVDIVCK-DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTS 446
+Y++ G+I A K D++ K D+ +++S+I Y G AL L KEM GI
Sbjct: 425 DVYAKSGKIVAA-KQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483
Query: 447 YSLPLCISSCSQLLAINVGKQFHV-----FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSK 501
++ +S+CS ++ G++ + + I+ H S ++D+Y + G + +K
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH----FSCMVDLYGRAGFLAKAK 539
Query: 502 KVF-DAQVKPNEVIYNAMICGYAHHGQ---AKQAIEIFTMLEKNGVTPNQVTFLAMLSAC 557
+ + KP+ + ++ HG K A E +LE P +A + A
Sbjct: 540 DIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAE--KLLEMKPENPGYYVLIANMYAA 597
Query: 558 S 558
+
Sbjct: 598 A 598
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 196/449 (43%), Gaps = 46/449 (10%)
Query: 243 HVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRR 302
H +S L ACV++ GVQVH I +G + + L+T Y+ F +A+ +
Sbjct: 44 HSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN 103
Query: 303 IDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQ--GATLIAILKSCKNKSD 360
D + WN +I ++A+ + +++ R S I+ T ++LK+C D
Sbjct: 104 SDILHPLPWNVLIASYAK----NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLD 159
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
+ GR +H + SS V NAL+ MY +G A + F + +D SW+++I
Sbjct: 160 VAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINC 219
Query: 421 YKQNGMESEALELCKEMLAEGI-----------------------------------TFT 445
Y GM SEA EL +M G+ +
Sbjct: 220 YASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLD 279
Query: 446 SYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD 505
++ + + +CS + AI +GK+ H AI S Y+ V +++I MY+KC + + VF
Sbjct: 280 PVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFR 339
Query: 506 AQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIED 565
+ + +N++I GYA ++++A + + G PN +T ++L C+ ++
Sbjct: 340 QTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQH 399
Query: 566 TLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI--VQKDGSESAWRTLLSACR 623
+L + K + ++ LVD Y ++G++ A Q+ + E + +L+
Sbjct: 400 GKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYG 459
Query: 624 NHNNTKIGEKSAKKMIE--LNPSDHASYI 650
N + K+M + P DH + +
Sbjct: 460 NQGEGGVALALFKEMTRSGIKP-DHVTVV 487
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 181/399 (45%), Gaps = 41/399 (10%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGV 66
+ W LI+S+ + + + M RP+ +T+ +L+AC G +HG
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCM 126
+ S + + ++L+ MY N+ A +F + ERD V+WN +I+ +A G +
Sbjct: 170 IEVSSYKSSLYVCNALISMY-KRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 127 VQRLFSEMW----EVE---------------------GLKPDNRTF-VSL--------LK 152
LF +MW EV GL R F SL LK
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 153 CCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
CS +G + +IHGLA + V + ++ +Y+KC D+ +F EE
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCT 348
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
W+SIISGY N+ EEA H ++M +P+ L+S L C I +L G + H ++
Sbjct: 349 WNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 270 KNGHQND-CFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRS 328
+ D + + L+ +YA G + A+++ + +D V + S+I + G+G +
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGV-A 467
Query: 329 MQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI 367
+ L +E+ R + ++ T++A+L +C + + G ++
Sbjct: 468 LALFKEMTR-SGIKPDHVTVVAVLSACSHSKLVHEGERL 505
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 159/336 (47%), Gaps = 13/336 (3%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V+TW + L+ G+ A L + MR + + L+AC+ +G +IH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
G+ + S + ++L+ MYS +LR A VF E L WN +ISG+AQ+
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYS-KCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKS 362
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETD-AVVSS 180
L EM V G +P++ T S+L C+ + + + H + D ++ +
Sbjct: 363 EEASHLLREML-VAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWN 421
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
++VD+YAK G + + +++ D M ++D ++S+I GY G A+ FK+M + +KP
Sbjct: 422 SLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP 481
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA-SVLLTLYANFGGLRDAEKL 299
D + + L AC + ++ G ++ +M C S ++ LY G L A+ +
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI 541
Query: 300 FRRIDDKDIVA-WNSMILA-----HAQLGQGSSRSM 329
+ K A W +++ A + Q+G+ ++ +
Sbjct: 542 IHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKL 577
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 285 bits (730), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 282/523 (53%), Gaps = 7/523 (1%)
Query: 169 KFGAETDAVV-SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAV 227
+ G E +V+ + ++ +Y +C + K+FD M E + +++IS Y ++AV
Sbjct: 110 RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 228 HFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLY 287
F M KP + ++ L++ V L+ G Q+H +I+ G ++ + + ++ +Y
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMY 229
Query: 288 ANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGAT 347
G L A+++F ++ K VA +++ + Q G+ +++L +L T ++
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD-ALKLFVDL-VTEGVEWDSFV 287
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV 407
+LK+C + +L G+QIH+ V K + VG LV Y +C A +AF +I
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 408 CKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT-FTSYSLPLCISSCSQLLAINVGK 466
+D SWS+II Y Q EA++ K + ++ + S++ +CS L N+G
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 467 QFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHG 526
Q H AIK Y S++I MY+KCG ++D+ +VF++ P+ V + A I G+A++G
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 527 QAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY 586
A +A+ +F + G+ PN VTF+A+L+ACSHAG +E + ML KY + P +HY
Sbjct: 468 NASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY 527
Query: 587 SCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNP 643
C++D Y R+G L+EA + ++ E +W+ LS C H N ++GE + +++ +L+P
Sbjct: 528 DCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDP 587
Query: 644 SDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
D A Y+L N+Y GKWEEA + + M + +KK+ SW+
Sbjct: 588 EDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWI 630
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 219/434 (50%), Gaps = 11/434 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M N V+ TT+IS++ G + KA LF+ M ++P ++ LL++ P + G
Sbjct: 144 MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFG 203
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
QIH ++R+GL + + +V MY G L A VF + + VA ++ G+ Q
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGW-LVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
G +LF ++ EG++ D+ F +LK C++L E+ QIH +K G E++
Sbjct: 263 AGRARDALKLFVDL-VTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS 321
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM-CKQ 236
V + +VD Y KC S + F + E ++ WS+IISGY ++ EEAV FK + K
Sbjct: 322 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+ +S +AC + D N G QVH IK + S L+T+Y+ G L DA
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
++F +D+ DIVAW + I HA G +S +++L +++ + ++ T IA+L +C
Sbjct: 442 NEVFESMDNPDIVAWTAFISGHAYYGN-ASEALRLFEKM-VSCGMKPNSVTFIAVLTACS 499
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDS-SW 414
+ + G+ +++ PT+ + ++ +Y+ G + +A K ++ + D+ SW
Sbjct: 500 HAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSW 559
Query: 415 SSII-GTYKQNGME 427
+ G + +E
Sbjct: 560 KCFLSGCWTHKNLE 573
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/511 (24%), Positives = 239/511 (46%), Gaps = 16/511 (3%)
Query: 24 KAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLV 83
+AF+ +M + Y++ L AC + G +H + R G+E + V
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCV 124
Query: 84 YMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPD 143
+L DA +F ++ E + V+ MIS +A+ G LFS M G KP
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML-ASGDKPP 183
Query: 144 NRTFVSLLKCC---STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFD 200
+ + +LLK L QIH + G ++ + + +V++Y KCG + +++FD
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 201 SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNT 260
M K + ++ GYT R +A+ F D+ + V+ D V S L+AC +E+LN
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
G Q+H + K G +++ V + L+ Y A + F+ I + + V+W+++I + Q
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 321 LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPT 380
+ Q +++ + L + + T +I ++C +D G Q+H+ +K S+
Sbjct: 364 MSQ-FEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ 422
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
+AL+ MYS+CG + DA + F + D +W++ I + G SEAL L ++M++
Sbjct: 423 YGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC 482
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQ-----FHVFAIKSGYNHDVYVGSSIIDMYAKCG 495
G+ S + +++CS + GK + + +H +ID+YA+ G
Sbjct: 483 GMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDH----YDCMIDIYARSG 538
Query: 496 HMEDSKKVF-DAQVKPNEVIYNAMICGYAHH 525
++++ K + +P+ + + + G H
Sbjct: 539 LLDEALKFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 217/466 (46%), Gaps = 31/466 (6%)
Query: 225 EAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL 284
EA F ++M K V + AC E+ L+ G +H +M + + +L
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 285 TLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQ 344
+Y L DA+KLF + + + V+ +MI A+A+ G +++ L + + +
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGI-LDKAVGLFSGM-LASGDKPP 183
Query: 345 GATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFV 404
+ +LKS N L GRQIH+ V+++ + T + +V+MY +CG + A + F
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 405 DIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINV 464
+ K + + ++ Y Q G +AL+L +++ EG+ + S+ + + +C+ L +N+
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 465 GKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAH 524
GKQ H K G +V VG+ ++D Y KC E + + F +PN+V ++A+I GY
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 525 HGQAKQAIEIFTMLE-KNGVTPNQVTFLAMLSACS-----------HAGYIEDTLNLFTL 572
Q ++A++ F L KN N T+ ++ ACS HA I+ +L
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR-----SL 418
Query: 573 MLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES--AWRTLLSACRNHNNTKI 630
+ +Y S L+ Y + G L++A ++ + + AW +S + N
Sbjct: 419 IGSQYG-------ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471
Query: 631 GEKSAKKMIE--LNPSDHASYILLSNIYIEEGKWEEARDCREKMAK 674
+ +KM+ + P + ++I + G E+ + C + M +
Sbjct: 472 ALRLFEKMVSCGMKP-NSVTFIAVLTACSHAGLVEQGKHCLDTMLR 516
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 263/476 (55%), Gaps = 26/476 (5%)
Query: 230 FKDMCKQRVKP----------------DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH 273
F +C QR P D S ++ C+ ++ G + + NGH
Sbjct: 33 FTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGH 92
Query: 274 QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQ 333
+ F+ +VL+ +Y F L DA +LF ++ +++++W +MI A+++ + ++++LL
Sbjct: 93 RPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC-KIHQKALELLV 151
Query: 334 ELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSEC 393
+ R +++ T ++L+SC SD+ R +H ++K + V +AL+ ++++
Sbjct: 152 LMLRD-NVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL 207
Query: 394 GQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCI 453
G+ DA F ++V D W+SIIG + QN ALEL K M G +L +
Sbjct: 208 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 267
Query: 454 SSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEV 513
+C+ L + +G Q HV +K Y+ D+ + ++++DMY KCG +ED+ +VF+ + + +
Sbjct: 268 RACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325
Query: 514 IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
++ MI G A +G +++A+++F ++ +G PN +T + +L ACSHAG +ED F M
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385
Query: 574 LYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKI 630
Y I P EHY C++D G+AG+L++A +++ + E WRTLL ACR N +
Sbjct: 386 KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVL 445
Query: 631 GEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
E +AKK+I L+P D +Y LLSNIY KW+ + R +M G+KK+PG SW+
Sbjct: 446 AEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 207/406 (50%), Gaps = 20/406 (4%)
Query: 22 VPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSS 81
+P+A + + ++ + T+S L++ C + + G I L +G F +
Sbjct: 42 LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNV 101
Query: 82 LVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEV---E 138
L+ MY L DA +F + +R++++W MIS +++ C + + E+ + +
Sbjct: 102 LINMYVKFNL-LNDAHQLFDQMPQRNVISWTTMISAYSK----CKIHQKALELLVLMLRD 156
Query: 139 GLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKI 198
++P+ T+ S+L+ C+ + +V +H K G E+D V SA++D++AK G+ +
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 199 FDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDL 258
FD M D VW+SII G+ N+R + A+ FK M + +Q L+S LRAC + L
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 259 NTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAH 318
G+Q H ++K + D + + L+ +Y G L DA ++F ++ ++D++ W++MI
Sbjct: 277 ELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL 334
Query: 319 AQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG----RQIHSLVMKS 374
AQ G S +++L + + +++ + T++ +L +C + L G R + L
Sbjct: 335 AQNGY-SQEALKLFERM-KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS-SWSSIIG 419
V ++ + + G++ DA K ++ C+ D+ +W +++G
Sbjct: 393 PVREHY---GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 165/322 (51%), Gaps = 12/322 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNV++WTT+IS++ + KA +L M + RPN YT+S +LR+C + +V
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN--GMSDVR 179
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+ +H +++ GLE D F S+L+ +++ G DA VF +++ D + WN +I GFAQ
Sbjct: 180 M-LHCGIIKEGLESDVFVRSALIDVFAKLGEP-EDALSVFDEMVTGDAIVWNSIIGGFAQ 237
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
+ LF M + G + T S+L+ C+ L + MQ H K+ + D +
Sbjct: 238 NSRSDVALELFKRM-KRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLI 294
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
+++A+VD+Y KCG + ++F+ M+E+D WS++ISG N +EA+ F+ M
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK-NGHQNDCFVASVLLTLYANFGGLRDA 296
KP+ + L AC L G M K G ++ L G L DA
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 297 EKLFRRID-DKDIVAWNSMILA 317
KL ++ + D V W +++ A
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGA 436
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 166/584 (28%), Positives = 299/584 (51%), Gaps = 39/584 (6%)
Query: 138 EGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAK--CGDVSSC 195
E + D F+S+L C T + Q+H + G + + + G VS
Sbjct: 28 ESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYA 87
Query: 196 RKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACV-E 254
K+F + E D VW+++I G++ + E V + +M K+ V PD H L +
Sbjct: 88 YKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRD 147
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSM 314
L G ++H ++K G ++ +V + L+ +Y+ G + A +F R +D+ +WN M
Sbjct: 148 GGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM 207
Query: 315 ILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS 374
I + ++ + S++LL E+ R + TL+ +L +C D +++H V +
Sbjct: 208 ISGYNRMKE-YEESIELLVEMERNL-VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC 265
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQN---------- 424
+ NALV+ Y+ CG++ A + F + +D SW+SI+ Y +
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYF 325
Query: 425 ---------------------GMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
G +E+LE+ +EM + G+ +++ +++C+ L ++
Sbjct: 326 DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 464 VGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYA 523
+G+ + K+ +DV VG+++IDMY KCG E ++KVF + ++ + AM+ G A
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 445
Query: 524 HHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPES 583
++GQ ++AI++F ++ + P+ +T+L +LSAC+H+G ++ F M ++I+P
Sbjct: 446 NNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSL 505
Query: 584 EHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIE 640
HY C+VD GRAG ++EAY+I++K + + W LL A R HN+ + E +AKK++E
Sbjct: 506 VHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILE 565
Query: 641 LNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
L P + A Y LL NIY +W++ R+ R K+ +KK PG S
Sbjct: 566 LEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFS 609
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 133/553 (24%), Positives = 246/553 (44%), Gaps = 74/553 (13%)
Query: 40 NEYT-FSVLLRACATPALWNVGLQIHGVLVRSGLERDK-FAGSSLVYMYSNNGSNLRDAC 97
N+Y+ F +L C T + Q+H + G+ + F V+ S G ++ A
Sbjct: 32 NDYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAY 88
Query: 98 CVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL 157
+F + E D+V WN MI G+++V RL+ M + EG+ PD+ TF LL
Sbjct: 89 KLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLK-EGVTPDSHTFPFLLNGLKRD 147
Query: 158 GEVM----QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSI 213
G + ++H KFG ++ V +A+V +Y+ CG + R +FD ++D F W+ +
Sbjct: 148 GGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM 207
Query: 214 ISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH 273
ISGY EE++ +M + V P L L AC +++D + +VH + +
Sbjct: 208 ISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKT 267
Query: 274 QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI----------LAHAQLGQ 323
+ + + L+ YA G + A ++FR + +D+++W S++ LA Q
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 324 GSSR--------------------SMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPA 363
R S+++ +E+ ++ + T++++L +C + L
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREM-QSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 364 GRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQ 423
G I + + K+ + + +VGNAL+ MY +CG A K F D+ +D +W++++
Sbjct: 387 GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLAN 446
Query: 424 NGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYV 483
NG EA+++ +M I + +S+C+ ++ ++F
Sbjct: 447 NGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFF-------------- 492
Query: 484 GSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGV 543
+K D +++P+ V Y M+ G K+A EI L K +
Sbjct: 493 ----------------AKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI---LRKMPM 533
Query: 544 TPNQVTFLAMLSA 556
PN + + A+L A
Sbjct: 534 NPNSIVWGALLGA 546
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 210/476 (44%), Gaps = 43/476 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATP-ALWNV 59
+P +VV W +I + + +L+ +M P+ +TF LL
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRD-ACCVFHDLLERDLVAWNVMISGF 118
G ++H +V+ GL + + ++LV MYS G L D A VF + D+ +WN+MISG+
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCG--LMDMARGVFDRRCKEDVFSWNLMISGY 211
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGE---VMQIHGLASKFGAETD 175
++ ++ L EM E + P + T + +L CS + + ++H S+ E
Sbjct: 212 NRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPS 270
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYT----------------V 219
+ +A+V+ YA CG++ +IF SM+ +D W+SI+ GY V
Sbjct: 271 LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPV 330
Query: 220 NNR---------------GEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
+R E++ F++M + PD+ + S L AC + L G +
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI 390
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
+ KN +ND V + L+ +Y G A+K+F +D +D W +M++ A GQG
Sbjct: 391 KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG- 383
Q + S+Q T + +L +C + + R+ + + P+LV
Sbjct: 451 QEAIKVFFQ--MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY 508
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCKDDS-SWSSIIGTYKQNGMESEALELCKEML 438
+V M G + +A++ + +S W +++G + + E A K++L
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL 564
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 166/348 (47%), Gaps = 12/348 (3%)
Query: 338 TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS-HPTLVGNALVHMYSECG-Q 395
T S+ + I+IL CK +Q+HS + V+ +PT V S G
Sbjct: 27 TESISNDYSRFISILGVCKTTDQF---KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGH 83
Query: 396 IGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS 455
+ A+K FV I D W+++I + + + E + L ML EG+T S++ P ++
Sbjct: 84 VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNG 143
Query: 456 CSQ-LLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVI 514
+ A+ GK+ H +K G ++YV ++++ MY+ CG M+ ++ VFD + K +
Sbjct: 144 LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFS 203
Query: 515 YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLML 574
+N MI GY + +++IE+ +E+N V+P VT L +LSACS +D +
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVK-DKDLCKRVHEYV 262
Query: 575 YKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ--KDGSESAWRTLLSACRNHNNTKIGE 632
+ K +P + LV+AY G ++ A +I + K +W +++ N K+
Sbjct: 263 SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLAR 322
Query: 633 KSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
+M D S+ ++ + Y+ G + E+ + +M G+ D
Sbjct: 323 TYFDQM---PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 278/488 (56%), Gaps = 14/488 (2%)
Query: 207 NFVWSSI--ISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
N+V +I IS N R +EA+ +M + H + L AC++ L G +V
Sbjct: 18 NYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRV 74
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
H MIK + ++ + LL Y L DA K+ + +K++V+W +MI ++Q G
Sbjct: 75 HAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGH- 133
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
SS ++ + E+ R+ + T +L SC S L G+QIH L++K + VG+
Sbjct: 134 SSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGS 192
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
+L+ MY++ GQI +A + F + +D S ++II Y Q G++ EALE+ + +EG++
Sbjct: 193 SLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSP 252
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
+ +++ S L ++ GKQ H ++ + +S+IDMY+KCG++ ++++F
Sbjct: 253 NYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLF 312
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML-EKNGVTPNQVTFLAMLSACSHAGYI 563
D + + +NAM+ GY+ HG ++ +E+F ++ ++ V P+ VT LA+LS CSH G +
Sbjct: 313 DNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH-GRM 371
Query: 564 EDT-LNLFTLMLY-KYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESA---WRTL 618
EDT LN+F M+ +Y KP +EHY C+VD GRAGR++EA++ +++ S+ +L
Sbjct: 372 EDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSL 431
Query: 619 LSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVK 678
L ACR H + IGE +++IE+ P + +Y++LSN+Y G+W + + R M + V
Sbjct: 432 LGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVT 491
Query: 679 KDPGSSWL 686
K+PG SW+
Sbjct: 492 KEPGRSWI 499
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 157/277 (56%), Gaps = 14/277 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP +NVV+WT +IS + + G +A +F +M D +PNE+TF+ +L +C + +G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
QIHG++V+ + F GSSL+ MY+ G +++A +F L ERD+V+ +I+G+AQ
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAG-QIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 121 VG----DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAE 173
+G M RL S EG+ P+ T+ SLL S L + Q H +
Sbjct: 232 LGLDEEALEMFHRLHS-----EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
AV+ ++++D+Y+KCG++S R++FD+M E+ W++++ GY+ + G E + F+ M
Sbjct: 287 FYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM 346
Query: 234 C-KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
++RVKPD L + L C +TG+ + M+
Sbjct: 347 RDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 192/401 (47%), Gaps = 18/401 (4%)
Query: 112 NVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDN--RTFVSLLKCC---STLGEVMQIHGL 166
N ++ + C RL + E+ L P+ + +LL C L + ++H
Sbjct: 18 NYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAH 77
Query: 167 ASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEA 226
K + + ++ Y KC + RK+ D M EK+ W+++IS Y+ EA
Sbjct: 78 MIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEA 137
Query: 227 VHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTL 286
+ F +M + KP++ ++ L +C+ L G Q+HG ++K + + FV S LL +
Sbjct: 138 LTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDM 197
Query: 287 YANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA 346
YA G +++A ++F + ++D+V+ ++I +AQLG ++++ LH + +
Sbjct: 198 YAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL-DEEALEMFHRLH-SEGMSPNYV 255
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI 406
T ++L + + L G+Q H V++ + ++ N+L+ MYS+CG + A + F ++
Sbjct: 256 TYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM 315
Query: 407 VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEG-ITFTSYSLPLCISSCSQ------L 459
+ SW++++ Y ++G+ E LEL + M E + + +L +S CS
Sbjct: 316 PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTG 375
Query: 460 LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
L I G + K G H I+DM + G ++++
Sbjct: 376 LNIFDGMVAGEYGTKPGTEHY----GCIVDMLGRAGRIDEA 412
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 179/365 (49%), Gaps = 8/365 (2%)
Query: 42 YTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFH 101
+ + LL AC G ++H ++++ + + L+ Y L DA V
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC-LEDARKVLD 111
Query: 102 DLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLG 158
++ E+++V+W MIS ++Q G +F+EM +G KP+ TF ++L C S LG
Sbjct: 112 EMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLG 170
Query: 159 EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYT 218
QIHGL K+ ++ V S+++D+YAK G + R+IF+ + E+D ++II+GY
Sbjct: 171 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYA 230
Query: 219 VNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCF 278
EEA+ F + + + P+ +S L A + L+ G Q H +++
Sbjct: 231 QLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 290
Query: 279 VASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT 338
+ + L+ +Y+ G L A +LF + ++ ++WN+M++ +++ G G ++L + +
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE-VLELFRLMRDE 349
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIH-SLVMKSSVSHP-TLVGNALVHMYSECGQI 396
++ TL+A+L C + G I +V + P T +V M G+I
Sbjct: 350 KRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRI 409
Query: 397 GDAFK 401
+AF+
Sbjct: 410 DEAFE 414
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 267/504 (52%), Gaps = 42/504 (8%)
Query: 186 YAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVL 245
YA DV+S RK+FD + E++ + + +I Y N E V F MC V+PD +
Sbjct: 84 YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTF 143
Query: 246 SSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD 305
L+AC + G ++HG K G + FV + L+++Y G L +A + +
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 306 KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGR 365
+D+V+WNS+++ +AQ Q ++++ +E+ + + T+ ++L + N
Sbjct: 204 RDVVSWNSLVVGYAQ-NQRFDDALEVCREME-SVKISHDAGTMASLLPAVSN-------- 253
Query: 366 QIHSLVMKSSVSHPTLVGNALV--HMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQ 423
T N + M+ + G+ K+ V SW+ +IG Y +
Sbjct: 254 --------------TTTENVMYVKDMFFKMGK-----KSLV--------SWNVMIGVYMK 286
Query: 424 NGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYV 483
N M EA+EL M A+G + S+ + +C A+++GK+ H + + ++ +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 484 GSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGV 543
+++IDMYAKCG +E ++ VF+ + V + AMI Y G+ A+ +F+ L+ +G+
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 544 TPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAY 603
P+ + F+ L+ACSHAG +E+ + F LM YKI P EH +C+VD GRAG+++EAY
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 604 QIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEG 660
+ +Q + +E W LL ACR H++T IG +A K+ +L P Y+LLSNIY + G
Sbjct: 467 RFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAG 526
Query: 661 KWEEARDCREKMAKTGVKKDPGSS 684
+WEE + R M G+KK+PG+S
Sbjct: 527 RWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/520 (22%), Positives = 238/520 (45%), Gaps = 45/520 (8%)
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
+H ++ L + G L+ Y++ ++ A VF ++ ER+++ NVMI + G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASL-KDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVS 179
+ ++F M ++PD+ TF +LK CS G ++ +IHG A+K G + V
Sbjct: 120 FYGEGVKVFGTMCGC-NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
+ +V +Y KCG +S R + D M +D W+S++ GY N R ++A+ ++M ++
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
D ++S L A V T N ++D +
Sbjct: 239 HDAGTMASLLPA------------------------------VSNTTTENVMYVKD---M 265
Query: 300 FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKS 359
F ++ K +V+WN MI + + +++L + + ++ ++L +C + S
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAM-PVEAVELYSRME-ADGFEPDAVSITSVLPACGDTS 323
Query: 360 DLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIG 419
L G++IH + + + L+ NAL+ MY++CG + A F ++ +D SW+++I
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 420 TYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSGYN 478
Y +G +A+ L ++ G+ S + +++CS + G+ F +
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 479 HDVYVGSSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTM 537
+ + ++D+ + G ++++ + + D ++PNE ++ A++ H I +
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD--IGLLAA 501
Query: 538 LEKNGVTPNQVTFLAMLSAC-SHAGYIEDTLNLFTLMLYK 576
+ + P Q + +LS + AG E+ N+ +M K
Sbjct: 502 DKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK 541
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 189/424 (44%), Gaps = 42/424 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P RNV+ +I S++ G + ++F M + RP+ YTF +L+AC+ +G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IHG + GL F G+ LV MY G L +A V ++ RD+V+WN ++ G+AQ
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGF-LSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHG---LASKFGAETDAV 177
N+ F L+ C + V H +AS A ++
Sbjct: 219 -----------------------NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
+ M Y K +F M +K W+ +I Y N EAV + M
Sbjct: 256 TENVM---YVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG 304
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
+PD ++S L AC + L+ G ++HG + + + + + L+ +YA G L A
Sbjct: 305 FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKAR 364
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
+F + +D+V+W +MI A+ G+G ++ L +L + + L + L +C +
Sbjct: 365 DVFENMKSRDVVSWTAMISAYGFSGRGCD-AVALFSKL-QDSGLVPDSIAFVTTLAACSH 422
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAFVDIVCK-DDSSWS 415
L GR L+ P L A +V + G++ +A++ D+ + ++ W
Sbjct: 423 AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWG 482
Query: 416 SIIG 419
+++G
Sbjct: 483 ALLG 486
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 156/334 (46%), Gaps = 28/334 (8%)
Query: 360 DLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIG 419
D+ R +HS ++ + + +G L+ Y+ + A K F +I ++ + +I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 420 TYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH 479
+Y NG E +++ M + Y+ P + +CS I +G++ H A K G +
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLE 539
++VG+ ++ MY KCG + +++ V D + + V +N+++ GYA + + A+E+ +E
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 540 KNGVTPNQVTFLAMLSACSHAG-----YIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
++ + T ++L A S+ Y++D M +K K ++ ++ Y
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENVMYVKD-------MFFKMG-KKSLVSWNVMIGVYM 285
Query: 595 RAGRLEEA---YQIVQKDGSES---AWRTLLSACRNHNNTKIGEK-----SAKKMIELNP 643
+ EA Y ++ DG E + ++L AC + + +G+K KK+I
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 644 SDHASYILLSNIYIEEGKWEEARDCREKMAKTGV 677
++A L ++Y + G E+ARD E M V
Sbjct: 346 LENA----LIDMYAKCGCLEKARDVFENMKSRDV 375
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 13/229 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M +++V+W +I +++ +A +L++ M P+ + + +L AC + ++G
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IHG + R L + ++L+ MY+ G L A VF ++ RD+V+W MIS +
Sbjct: 329 KKIHGYIERKKLIPNLLLENALIDMYAKCGC-LEKARDVFENMKSRDVVSWTAMISAYGF 387
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G C LFS++ + GL PD+ FV+ L CS G + + S F TD +
Sbjct: 388 SGRGCDAVALFSKLQD-SGLVPDSIAFVTTLAACSHAGLLEEGR---SCFKLMTDHYKIT 443
Query: 181 A-------MVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNN 221
MVDL + G V + M E + VW +++ V++
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHS 492
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/590 (30%), Positives = 288/590 (48%), Gaps = 24/590 (4%)
Query: 110 AWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG-----EVMQIH 164
AWN+ I D LF EM + G +P+N TF + K C+ L E++ H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 165 GLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGE 224
+ S F +D V +A VD++ KC V K+F+ M E+D W++++SG+ + +
Sbjct: 78 LIKSPFW--SDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 225 EAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL 284
+A F++M + PD + + +++ + L +H I+ G VA+ +
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 285 TLYANFGGLRDAEKLFRRID--DKDIVAWNSMILAHAQLGQGSSR----SMQLLQELHRT 338
+ Y G L A+ +F ID D+ +V+WNSM A++ G+ + L +E
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
S T I + SC+N L GR IHS + N + MYS+
Sbjct: 256 LS------TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
A F + + SW+ +I Y + G EAL L M+ G +L IS C +
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Query: 459 LLAINVGKQFHVFAIKSGYNHD-VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNA 517
++ GK A G D V + +++IDMY+KCG + +++ +FD + V +
Sbjct: 370 FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 518 MICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKY 577
MI GYA +G +A+++F+ + PN +TFLA+L AC+H+G +E F +M Y
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 578 KIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSE---SAWRTLLSACRNHNNTKIGEKS 634
I P +HYSC+VD GR G+LEEA ++++ ++ W LL+AC+ H N KI E++
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQA 549
Query: 635 AKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
A+ + L P A Y+ ++NIY G W+ R M + +KK PG S
Sbjct: 550 AESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGES 599
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/556 (25%), Positives = 251/556 (45%), Gaps = 23/556 (4%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V W I + ++ LF +M+ PN +TF + +ACA A +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
L++S D F G++ V M+ S + A VF + ERD WN M+SGF Q G
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNS-VDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETDAVVSSA 181
LF EM + + PD+ T ++L++ S +L + +H + + G + V++
Sbjct: 135 DKAFSLFREM-RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 182 MVDLYAKCGDVSSCRKIFDSMEEKDNFV--WSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
+ Y KCGD+ S + +F++++ D V W+S+ Y+V +A + M ++ K
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
PD + +C E L G +H I G D + +++Y+ A L
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 300 FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKS 359
F + + V+W MI +A+ G ++ L + ++ + TL++++ C
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGD-MDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFG 371
Query: 360 DLPAGRQIHSLV-MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII 418
L G+ I + + ++ NAL+ MYS+CG I +A F + K +W+++I
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 419 GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQFH----VFAI 473
Y NG+ EAL+L +M+ + + +C+ ++ G + FH V+ I
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 474 KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNAMICGYAHHGQ---AK 529
G +H S ++D+ + G +E++ ++ + KP+ I+ A++ H A+
Sbjct: 492 SPGLDH----YSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 530 QAIEIFTMLEKNGVTP 545
QA E LE P
Sbjct: 548 QAAESLFNLEPQMAAP 563
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 199/439 (45%), Gaps = 30/439 (6%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+ TW ++S ++G KAF LF +MR+ + P+ T L+++ + +
Sbjct: 113 MPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLL 172
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFH--DLLERDLVAWNVMISGF 118
+H V +R G++ ++ + Y G +L A VF D +R +V+WN M +
Sbjct: 173 EAMHAVGIRLGVDVQVTVANTWISTYGKCG-DLDSAKLVFEAIDRGDRTVVSWNSMFKAY 231
Query: 119 AQVGD-------FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLAS 168
+ G+ +C++ R E KPD TF++L C TL + IH A
Sbjct: 232 SVFGEAFDAFGLYCLMLR--------EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVH 228
G + D + + +Y+K D S R +FD M + W+ +ISGY +EA+
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQM-IKNGHQNDCFVASVLLTLY 287
F M K KPD L S + C + L TG + + I +++ + + L+ +Y
Sbjct: 344 LFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMY 403
Query: 288 ANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG-- 345
+ G + +A +F +K +V W +MI +A G ++ L+ + L +
Sbjct: 404 SKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGI----FLEALKLFSKMIDLDYKPNH 459
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFV 404
T +A+L++C + L G + ++ + P L + +V + G++ +A +
Sbjct: 460 ITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIR 519
Query: 405 DIVCKDDSS-WSSIIGTYK 422
++ K D+ W +++ K
Sbjct: 520 NMSAKPDAGIWGALLNACK 538
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 274/486 (56%), Gaps = 13/486 (2%)
Query: 209 VWSSIIS----GYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
+W S+I G T+N R + ++ M + V P +H L+A ++ D N Q
Sbjct: 69 LWDSLIGHFSGGITLNRR--LSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNP-FQF 125
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
H ++K G +D FV + L++ Y++ G A +LF +DKD+V W +MI + G
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS- 184
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS-VSHPTLVG 383
+S +M E+ + T + T++++LK+ D+ GR +H L +++ V +G
Sbjct: 185 ASEAMVYFVEM-KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT 443
++LV MY +C DA K F ++ ++ +W+++I Y Q+ + + + +EML +
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 444 FTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
+L +S+C+ + A++ G++ H + IK+ + G+++ID+Y KCG +E++ V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 504 FDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI 563
F+ + N + AMI G+A HG A+ A ++F + + V+PN+VTF+A+LSAC+H G +
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 564 EDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLS 620
E+ LF M ++ ++P+++HY+C+VD +GR G LEEA ++++ + + W L
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 621 ACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
+C H + ++G+ +A ++I+L PS Y LL+N+Y E W+E R++M V K
Sbjct: 484 SCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS 543
Query: 681 PGSSWL 686
PG SW+
Sbjct: 544 PGFSWI 549
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 207/424 (48%), Gaps = 21/424 (4%)
Query: 9 WTTLISSHLRAGSVPK---AFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
W +LI H G +F + MR P+ +TF LL+A N Q H
Sbjct: 70 WDSLIG-HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHA 127
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRD-ACCVFHDLLERDLVAWNVMISGFAQVGDF 124
+V+ GL+ D F +SL+ YS++G L D A +F ++D+V W MI GF + G
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSG--LFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSA 185
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFG-AETDAVVSS 180
F EM + G+ + T VS+LK + +V +HGL + G + D + S
Sbjct: 186 SEAMVYFVEMKKT-GVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGS 244
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
++VD+Y KC +K+FD M ++ W+++I+GY + ++ + F++M K V P
Sbjct: 245 SLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
++ LSS L AC + L+ G +VH MIKN + + + L+ LY G L +A +F
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
R+ +K++ W +MI A G +R L ++ + T +A+L +C +
Sbjct: 365 ERLHEKNVYTWTAMINGFA--AHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGL 422
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGN--ALVHMYSECGQIGDAFKAFVDIVCKDDSS--WSS 416
+ GR++ L MK + + +V ++ G + +A KA ++ + + ++ W +
Sbjct: 423 VEEGRRLF-LSMKGRFNMEPKADHYACMVDLFGRKGLLEEA-KALIERMPMEPTNVVWGA 480
Query: 417 IIGT 420
+ G+
Sbjct: 481 LFGS 484
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 168/357 (47%), Gaps = 39/357 (10%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
++VVTWT +I +R GS +A F +M+ NE T +L+A G +
Sbjct: 167 KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSV 226
Query: 64 HGVLVRSG-LERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
HG+ + +G ++ D F GSSLV MY S DA VF ++ R++V W +I+G+ Q
Sbjct: 227 HGLYLETGRVKCDVFIGSSLVDMY-GKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSR 285
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVS 179
F +F EM + + + P+ +T S+L C+ +G + ++H K E +
Sbjct: 286 CFDKGMLVFEEMLKSD-VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAG 344
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
+ ++DLY KCG + +F+ + EK+ + W+++I+G+ + +A F M V
Sbjct: 345 TTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVS 404
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA--------------SVLLT 285
P++ + L AC HG +++ G + F++ + ++
Sbjct: 405 PNEVTFMAVLSAC-----------AHGGLVEEGRR--LFLSMKGRFNMEPKADHYACMVD 451
Query: 286 LYANFGGLRDAEKLFRRID-DKDIVAWNSMI---LAHA--QLGQGSSRSMQLLQELH 336
L+ G L +A+ L R+ + V W ++ L H +LG+ ++ + LQ H
Sbjct: 452 LFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSH 508
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 7/219 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNVVTWT LI+ ++++ K +F +M D PNE T S +L ACA + G
Sbjct: 266 MPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG 325
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++H ++++ +E + AG++L+ +Y G L +A VF L E+++ W MI+GFA
Sbjct: 326 RRVHCYMIKNSIEINTTAGTTLIDLYVKCGC-LEEAILVFERLHEKNVYTWTAMINGFAA 384
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G LF M + P+ TF+++L C+ G V + + +F E A
Sbjct: 385 HGYARDAFDLFYTMLSSH-VSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKA 443
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSII 214
+ MVDL+ + G + + + + M E N VW ++
Sbjct: 444 DHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 287/543 (52%), Gaps = 56/543 (10%)
Query: 148 VSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCG-----DVSSCRKIFDSM 202
+SLL C L + QIHGL K+G +TD+ + ++ C + R++
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLLLCF 65
Query: 203 EEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR-VKPDQHVLSSTLRACVEIEDLNTG 261
E D F++++++ GY+ ++ +V F +M ++ V PD + ++A L TG
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQL 321
Q+H Q +K+G ++ FV + L+ +Y G + A K+F + ++VAWN
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWN--------- 176
Query: 322 GQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIH-SLVMKSSVSHPT 380
A++ +C +D+ R+I +++++ S
Sbjct: 177 ----------------------------AVITACFRGNDVAGAREIFDKMLVRNHTS--- 205
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
N ++ Y + G++ A + F ++ +DD SWS++I NG +E+ +E+
Sbjct: 206 --WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRA 263
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
G++ SL +S+CSQ + GK H F K+GY+ V V +++IDMY++CG++ +
Sbjct: 264 GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMA 323
Query: 501 KKVFDA-QVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSH 559
+ VF+ Q K V + +MI G A HGQ ++A+ +F + GVTP+ ++F+++L ACSH
Sbjct: 324 RLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSH 383
Query: 560 AGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQ-IVQKDGSESA--WR 616
AG IE+ + F+ M Y I+PE EHY C+VD YGR+G+L++AY I Q +A WR
Sbjct: 384 AGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWR 443
Query: 617 TLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTG 676
TLL AC +H N ++ E+ +++ EL+P++ +LLSN Y GKW++ R+ M
Sbjct: 444 TLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQR 503
Query: 677 VKK 679
+KK
Sbjct: 504 IKK 506
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 195/448 (43%), Gaps = 53/448 (11%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNV 59
P + + TL+ + + + +F +M R P+ ++F+ +++A
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G Q+H ++ GLE F G++L+ MY G + A VF ++ + +LVAWN +I+
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGC-VEFARKVFDEMHQPNLVAWNAVITACF 183
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS 179
+ D + +F +M L ++ ++
Sbjct: 184 RGNDVAGAREIFDKM-----LVRNHTSW-------------------------------- 206
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
+ M+ Y K G++ S ++IF M +D+ WS++I G N E+ +F+++ + +
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
P++ L+ L AC + G +HG + K G+ V + L+ +Y+ G + A +
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 300 FRRIDDKD-IVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
F + +K IV+W SMI A GQG +++L E+ + G + I++L +C +
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQG-EEAVRLFNEM-TAYGVTPDGISFISLLHACSHA 384
Query: 359 SDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDSS---- 413
+ G S + + P + +V +Y G++ A+ D +C+
Sbjct: 385 GLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY----DFICQMPIPPTAI 440
Query: 414 -WSSIIGTYKQNGMESEALELCKEMLAE 440
W +++G +G E E K+ L E
Sbjct: 441 VWRTLLGACSSHG-NIELAEQVKQRLNE 467
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/548 (29%), Positives = 280/548 (51%), Gaps = 10/548 (1%)
Query: 145 RTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME- 203
R +++L TL Q+H G E + V+ S++ + Y + + F+ +
Sbjct: 8 RALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPC 67
Query: 204 -EKDNFVWSSIISGYTVNNRG--EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNT 260
+++ W++I+SGY+ + + + + M + D L ++ACV + L
Sbjct: 68 WKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLEN 127
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
G+ +HG +KNG D +VA L+ +YA G + A+K+F I ++ V W +L
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWG--VLMKGY 185
Query: 321 LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSL-VMKSSVSHP 379
L + L L R T L + TLI ++K+C N G+ +H + + +S +
Sbjct: 186 LKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQS 245
Query: 380 TLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLA 439
+ +++ MY +C + +A K F V ++ W+++I + + EA +L ++ML
Sbjct: 246 DYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR 305
Query: 440 EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMED 499
E I +L + SCS L ++ GK H + I++G D +S IDMYA+CG+++
Sbjct: 306 ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQM 365
Query: 500 SKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSH 559
++ VFD + N + +++MI + +G ++A++ F ++ V PN VTF+++LSACSH
Sbjct: 366 ARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSH 425
Query: 560 AGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWR 616
+G +++ F M Y + PE EHY+C+VD GRAG + EA + SAW
Sbjct: 426 SGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWG 485
Query: 617 TLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTG 676
LLSACR H + + A+K++ + P + Y+LLSNIY + G WE R KM G
Sbjct: 486 ALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKG 545
Query: 677 VKKDPGSS 684
+K G S
Sbjct: 546 YRKHVGQS 553
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 233/448 (52%), Gaps = 20/448 (4%)
Query: 4 RNVVTWTTLISSHLRAGSV--PKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
RN +W T++S + ++ + L+N MR + + + ++AC L G+
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
IHG+ +++GL++D + SLV MY+ G+ + A VF ++ R+ V W V++ G+ +
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGT-MESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL--GEVMQ-IHGLASK--FGAETDA 176
V RLF M + GL D T + L+K C + G+V + +HG++ + F ++D
Sbjct: 189 SKDPEVFRLFCLMRDT-GLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ +S ++D+Y KC + + RK+F++ +++ +W+++ISG+ R EA F+ M ++
Sbjct: 248 LQAS-IIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+ P+Q L++ L +C + L G VHG MI+NG + D + + +YA G ++ A
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI--QGATLIAILKS 354
+F + ++++++W+SMI A G + L H+ S + T +++L +
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFE----EALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 355 CKNKSDLPAG-RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVD--IVCKDD 411
C + ++ G +Q S+ V +V + G+IG+A K+F+D V
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEA-KSFIDNMPVKPMA 481
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLA 439
S+W +++ + + A E+ +++L+
Sbjct: 482 SAWGALLSACRIHKEVDLAGEIAEKLLS 509
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 233/485 (48%), Gaps = 18/485 (3%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL--LERDLVAWNVMISGFA 119
Q+H ++ G E + GSSL Y + + L A F+ + +R+ +WN ++SG++
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAYIQS-NRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 120 QVGDFCM--VQRLFSEMWE-VEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAE 173
+ C V L++ M +G+ N F +K C LG + + IHGLA K G +
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA--IKACVGLGLLENGILIHGLAMKNGLD 141
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
D V+ ++V++YA+ G + S +K+FD + +++ +W ++ GY ++ E F M
Sbjct: 142 KDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLM 201
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH--QNDCFVASVLLTLYANFG 291
+ D L ++AC + G VHG I+ Q+D AS+ + +Y
Sbjct: 202 RDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASI-IDMYVKCR 260
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
L +A KLF D+++V W ++I A+ + + + L +++ R + L Q TL AI
Sbjct: 261 LLDNARKLFETSVDRNVVMWTTLISGFAKC-ERAVEAFDLFRQMLRESILPNQ-CTLAAI 318
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
L SC + L G+ +H ++++ + + + + MY+ CG I A F + ++
Sbjct: 319 LVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNV 378
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQFHV 470
SWSS+I + NG+ EAL+ +M ++ + S + +S+CS + G KQF
Sbjct: 379 ISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFES 438
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD-AQVKPNEVIYNAMICGYAHHGQAK 529
G + + ++D+ + G + ++K D VKP + A++ H +
Sbjct: 439 MTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVD 498
Query: 530 QAIEI 534
A EI
Sbjct: 499 LAGEI 503
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 141/275 (51%), Gaps = 6/275 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P RN V W L+ +L+ P+ F+LF MR + T L++AC VG
Sbjct: 170 IPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVG 229
Query: 61 LQIHGVLV-RSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
+HGV + RS +++ + +S++ MY L +A +F ++R++V W +ISGFA
Sbjct: 230 KCVHGVSIRRSFIDQSDYLQASIIDMYV-KCRLLDNARKLFETSVDRNVVMWTTLISGFA 288
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDA 176
+ LF +M E + P+ T ++L CS+LG + +HG + G E DA
Sbjct: 289 KCERAVEAFDLFRQMLR-ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDA 347
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V ++ +D+YA+CG++ R +FD M E++ WSS+I+ + +N EEA+ F M Q
Sbjct: 348 VNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQ 407
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
V P+ S L AC ++ G + M ++
Sbjct: 408 NVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRD 442
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 262/494 (53%), Gaps = 9/494 (1%)
Query: 198 IFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIED 257
+F + + F+++S+I+G+ N+ E + F + K + L+AC
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 258 LNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILA 317
G+ +H ++K G +D + LL++Y+ G L DA KLF I D+ +V W ++
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 318 HAQLGQGSSRSMQLLQELHRTTSLQIQGAT--LIAILKSCKNKSDLPAGRQIHSLVMKSS 375
+ S R + + + + ++ + ++ +L +C + DL +G I + +
Sbjct: 187 YTT----SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 376 VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCK 435
+ + V LV++Y++CG++ A F +V KD +WS++I Y N E +EL
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 436 EMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCG 495
+ML E + +S+ +SSC+ L A+++G+ + + ++++ +++IDMYAKCG
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 496 HMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLS 555
M +VF + + VI NA I G A +G K + +F EK G++P+ TFL +L
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLC 422
Query: 556 ACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIV---QKDGSE 612
C HAG I+D L F + Y +K EHY C+VD +GRAG L++AY+++ +
Sbjct: 423 GCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNA 482
Query: 613 SAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKM 672
W LLS CR +T++ E K++I L P + +Y+ LSNIY G+W+EA + R+ M
Sbjct: 483 IVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
Query: 673 AKTGVKKDPGSSWL 686
K G+KK PG SW+
Sbjct: 543 NKKGMKKIPGYSWI 556
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 218/444 (49%), Gaps = 17/444 (3%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N+ + +LI+ + + LF +R + +TF ++L+AC + +G+ +H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
++V+ G D A +SL+ +YS +G L DA +F ++ +R +V W + SG+ G
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSG-RLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSA 181
LF +M E+ G+KPD+ V +L C +G++ I + + ++ V +
Sbjct: 194 REAIDLFKKMVEM-GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 182 MVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPD 241
+V+LYAKCG + R +FDSM EKD WS++I GY N+ +E + F M ++ +KPD
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR 301
Q + L +C + L+ G + ++ + F+A+ L+ +YA G + ++F+
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372
Query: 302 RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
+ +KDIV N+ I A+ G S + + + + G+T + +L C + +
Sbjct: 373 EMKEKDIVIMNAAISGLAKNGH-VKLSFAVFGQTEK-LGISPDGSTFLGLLCGCVHAGLI 430
Query: 362 PAGRQIHSLV-----MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS-SWS 415
G + + + +K +V H +V ++ G + DA++ D+ + ++ W
Sbjct: 431 QDGLRFFNAISCVYALKRTVEHY----GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 416 SIIGTYKQNGMESEALELCKEMLA 439
+++ + A + KE++A
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIA 510
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 174/346 (50%), Gaps = 3/346 (0%)
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
Q+H +I + +D F+ ++LL F + + LF +I +NS+I
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN-N 89
Query: 323 QGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLV 382
++ L + R L + G T +LK+C S G +HSLV+K +H
Sbjct: 90 HLFHETLDLFLSI-RKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148
Query: 383 GNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGI 442
+L+ +YS G++ DA K F +I + +W+++ Y +G EA++L K+M+ G+
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 443 TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKK 502
SY + +S+C + ++ G+ + + + +V ++++++YAKCG ME ++
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 503 VFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGY 562
VFD+ V+ + V ++ MI GYA + K+ IE+F + + + P+Q + + LS+C+ G
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 563 IEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
+ D ++ +++ + L+D Y + G + +++ ++
Sbjct: 329 L-DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 5/266 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P R+VVTWT L S + +G +A LF M M +P+ Y +L AC + G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
I + ++++ F ++LV +Y+ G + A VF ++E+D+V W+ MI G+A
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCG-KMEKARSVFDSMVEKDIVTWSTMIQGYAS 290
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIH---GLASKFGAETDAV 177
LF +M + E LKPD + V L C++LG + L + T+
Sbjct: 291 NSFPKEGIELFLQMLQ-ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF 349
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
+++A++D+YAKCG ++ ++F M+EKD + ++ ISG N + + F K
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQ 263
+ PD L CV + G++
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLR 435
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/549 (29%), Positives = 288/549 (52%), Gaps = 16/549 (2%)
Query: 150 LLKCCST-----LGEVMQIHGLASKFGAET-DAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
LLK C+ +GE + H + + + DA +++++LY KC + RK+FD M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 204 EKDNFVWSSIISGYTVNNRGEEAVHFFKDMC-KQRVKPDQHVLSSTLRACVEIEDLNTGV 262
E++ W +++ GY + E + FK M +P++ V + ++C + G
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
Q HG +K G + FV + L+ +Y+ G +A ++ + D+ ++S + + + G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 323 QGSSRSMQLLQELHRTTSLQI--QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPT 380
+ L L +T + T ++ L+ N DL Q+HS +++ +
Sbjct: 217 AFK----EGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
AL++MY +CG++ A + F D ++ ++I+ Y Q+ EAL L +M +
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
+ Y+ + ++S ++L + G H +KSGY + V VG+++++MYAK G +ED+
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 501 KKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHA 560
+K F + V +N MI G +HHG ++A+E F + G PN++TF+ +L ACSH
Sbjct: 393 RKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHI 452
Query: 561 GYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSE---SAWRT 617
G++E L+ F ++ K+ ++P+ +HY+C+V +AG ++A ++ E AWRT
Sbjct: 453 GFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRT 512
Query: 618 LLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGV 677
LL+AC N ++G+K A+ IE P+D Y+LLSNI+ + +WE R M GV
Sbjct: 513 LLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572
Query: 678 KKDPGSSWL 686
KK+PG SW+
Sbjct: 573 KKEPGVSWI 581
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 202/407 (49%), Gaps = 15/407 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
MP RNVV+W ++ + +G + +LF M E RPNE+ +V+ ++C+
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMY---SNNGSNLRDACCVFHDLLERDLVAWNVMIS 116
G Q HG ++ GL +F ++LVYMY S NG +R V DL DL ++ +S
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR----VLDDLPYCDLSVFSSALS 210
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAE 173
G+ + G F + + E +N T++S L+ S L ++ +Q+H +FG
Sbjct: 211 GYLECGAFKEGLDVLRKTAN-EDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFN 269
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ A++++Y KCG V +++FD ++ F+ ++I+ Y + EEA++ F M
Sbjct: 270 AEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM 329
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
+ V P+++ + L + E+ L G +HG ++K+G++N V + L+ +YA G +
Sbjct: 330 DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSI 389
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
DA K F + +DIV WN+MI + G G +++ + T + T I +L+
Sbjct: 390 EDARKAFSGMTFRDIVTWNTMISGCSHHGLGRE-ALEAFDRMIFTGEIP-NRITFIGVLQ 447
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDA 399
+C + + G + +MK P + +V + S+ G DA
Sbjct: 448 ACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDA 494
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 212/462 (45%), Gaps = 10/462 (2%)
Query: 47 LLRACATPALWNVGLQIHGVLV---RSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL 103
LL+ CA + +G IH L+ +S D + +SL+ +Y +R A +F +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR-ARKLFDLM 95
Query: 104 LERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV--- 160
ER++V+W M+ G+ G V +LF M+ +P+ + K CS G +
Sbjct: 96 PERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Query: 161 MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVN 220
Q HG K+G + V + +V +Y+ C ++ D + D V+SS +SGY
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 221 NRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA 280
+E + + + + S+LR + DLN +QVH +M++ G +
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEAC 275
Query: 281 SVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTS 340
L+ +Y G + A+++F ++I +++ A+ Q + ++ L ++ T
Sbjct: 276 GALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQ-DKSFEEALNLFSKMD-TKE 333
Query: 341 LQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAF 400
+ T +L S S L G +H LV+KS + +VGNALV+MY++ G I DA
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 401 KAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLL 460
KAF + +D +W+++I +G+ EALE M+ G + + +CS +
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
Query: 461 AINVGKQ-FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSK 501
+ G F+ K D+ + I+ + +K G +D++
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE 495
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 251/449 (55%), Gaps = 5/449 (1%)
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
+++++ L+ C + HG++I+ + D + +VL+ Y+ G + A ++F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
+ ++ +V+WN+MI + + + S ++ + E+ R + T+ ++L +C D
Sbjct: 120 DGMLERSLVSWNTMIGLYTR-NRMESEALDIFLEM-RNEGFKFSEFTISSVLSACGVNCD 177
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
+++H L +K+ + VG AL+ +Y++CG I DA + F + K +WSS++
Sbjct: 178 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237
Query: 421 YKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD 480
Y QN EAL L + + ++L I +CS L A+ GKQ H KSG+ +
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN 297
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK 540
V+V SS +DMYAKCG + +S +F + N ++N +I G+A H + K+ + +F +++
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357
Query: 541 NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLE 600
+G+ PN+VTF ++LS C H G +E+ F LM Y + P HYSC+VD GRAG L
Sbjct: 358 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 417
Query: 601 EAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYI 657
EAY++++ D + S W +LL++CR + N ++ E +A+K+ EL P + +++LLSNIY
Sbjct: 418 EAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA 477
Query: 658 EEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+WEE R+ + VKK G SW+
Sbjct: 478 ANKQWEEIAKSRKLLRDCDVKKVRGKSWI 506
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 191/393 (48%), Gaps = 9/393 (2%)
Query: 33 RVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSN 92
R +E N +L+ CA HG ++R LE D + L+ YS G
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGF- 111
Query: 93 LRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK 152
+ A VF +LER LV+WN MI + + +F EM EG K T S+L
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRN-EGFKFSEFTISSVLS 170
Query: 153 CCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
C + ++ +H L+ K + + V +A++DLYAKCG + ++F+SM++K +
Sbjct: 171 ACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT 230
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
WSS+++GY N EEA+ ++ + ++ +Q LSS + AC + L G Q+H +
Sbjct: 231 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC 290
Query: 270 KNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM 329
K+G ++ FVAS + +YA G LR++ +F + +K++ WN++I A+ + +
Sbjct: 291 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK--HARPKEV 348
Query: 330 QLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVH 388
+L E + + T ++L C + + GR+ L+ + P +V + +V
Sbjct: 349 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 408
Query: 389 MYSECGQIGDAFKAFVDIVCKDDSS-WSSIIGT 420
+ G + +A++ I +S W S++ +
Sbjct: 409 ILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 161/320 (50%), Gaps = 7/320 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R++V+W T+I + R +A +F +MR + +E+T S +L AC
Sbjct: 122 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++H + V++ ++ + + G++L+ +Y+ G ++DA VF + ++ V W+ M++G+ Q
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGM-IKDAVQVFESMQDKSSVTWSSMVAGYVQ 240
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAV 177
++ L+ + L+ + T S++ CS L ++ Q+H + K G ++
Sbjct: 241 NKNYEEALLLYRRAQRM-SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V+S+ VD+YAKCG + IF ++EK+ +W++IISG+ + R +E + F+ M +
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQM-IKNGHQNDCFVASVLLTLYANFGGLRDA 296
+ P++ SS L C + G + M G + S ++ + G L +A
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
Query: 297 EKLFRRID-DKDIVAWNSMI 315
+L + I D W S++
Sbjct: 420 YELIKSIPFDPTASIWGSLL 439
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 119/224 (53%), Gaps = 7/224 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M ++ VTW+++++ +++ + +A L+ + M N++T S ++ AC+ A G
Sbjct: 223 MQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG 282
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+H V+ +SG + F SS V MY+ GS LR++ +F ++ E++L WN +ISGFA+
Sbjct: 283 KQMHAVICKSGFGSNVFVASSAVDMYAKCGS-LRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
V LF +M + +G+ P+ TF SLL C G V + + + +G +
Sbjct: 342 HARPKEVMILFEKMQQ-DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 400
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTV 219
V S MVD+ + G +S ++ S+ + +W S+++ V
Sbjct: 401 VHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRV 444
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/581 (28%), Positives = 292/581 (50%), Gaps = 49/581 (8%)
Query: 147 FVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCR------KIFD 200
+SLL+ C L + QI G D SS ++ A +S R KI
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCA----LSESRYLDYSVKILK 111
Query: 201 SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ---RVKPDQHVLSSTLRACVEIED 257
+E + F W+ I G++ + +E+ +K M + +PD + C ++
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 258 LNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILA 317
+ G + G ++K + V + + ++A+ G + +A K+F +D+V+WN +I
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 318 HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
+ ++G+ + + +L + ++ T+I ++ SC DL G++ + V ++ +
Sbjct: 232 YKKIGE--AEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGM----------- 426
+ NAL+ M+S+CG I +A + F ++ + SW+++I Y + G+
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 427 --------------------ESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK 466
+AL L +EM ++ C+S+CSQL A++VG
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 467 QFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHG 526
H + K + +V +G+S++DMYAKCG++ ++ VF N + Y A+I G A HG
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHG 469
Query: 527 QAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY 586
A AI F + G+ P+++TF+ +LSAC H G I+ + F+ M ++ + P+ +HY
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHY 529
Query: 587 SCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNP 643
S +VD GRAG LEEA ++++ + + W LL CR H N ++GEK+AKK++EL+P
Sbjct: 530 SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDP 589
Query: 644 SDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
SD Y+LL +Y E WE+A+ R M + GV+K PG S
Sbjct: 590 SDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 245/511 (47%), Gaps = 49/511 (9%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRD-ACCVFHDLLERDLVAWNVMISGFAQ 120
QI ++ +GL D FA S L+ + + S D + + + ++ +WNV I GF++
Sbjct: 71 QIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSE 130
Query: 121 VGDFCMVQRLFSEMWEVEGL---KPDNRTFVSLLKCC-----STLGEVMQIHGLASKFGA 172
+ L+ +M G +PD+ T+ L K C S+LG ++ H L K
Sbjct: 131 SENPKESFLLYKQMLR-HGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVL--KLRL 187
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKD 232
E + V +A + ++A CGD+ + RK+FD +D W+ +I+GY E+A++ +K
Sbjct: 188 ELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGG 292
M + VKPD + + +C + DLN G + + + +NG + + + L+ +++ G
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGD 307
Query: 293 LRDAE-------------------------------KLFRRIDDKDIVAWNSMILAHAQL 321
+ +A KLF +++KD+V WN+MI Q
Sbjct: 308 IHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQA 367
Query: 322 GQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTL 381
+G ++ L QE+ +T++ + T+I L +C L G IH + K S+S
Sbjct: 368 KRGQD-ALALFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVA 425
Query: 382 VGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEG 441
+G +LV MY++CG I +A F I ++ ++++IIG +G S A+ EM+ G
Sbjct: 426 LGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAG 485
Query: 442 ITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVG--SSIIDMYAKCGHMED 499
I + +S+C I G+ + +KS +N + + S ++D+ + G +E+
Sbjct: 486 IAPDEITFIGLLSACCHGGMIQTGRDY-FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 500 SKKVFDAQ-VKPNEVIYNAMICGYAHHGQAK 529
+ ++ ++ ++ + ++ A++ G HG +
Sbjct: 545 ADRLMESMPMEADAAVWGALLFGCRMHGNVE 575
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 220/460 (47%), Gaps = 43/460 (9%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMR---VMDERPNEYTFSVLLRACATPALWNVGL 61
N+ +W I + + ++F L+ M + RP+ +T+ VL + CA L ++G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
I G +++ LE ++ ++M+++ G ++ +A VF + RDLV+WN +I+G+ ++
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCG-DMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVV 178
G+ ++ M E EG+KPD+ T + L+ CS LG++ + + + G +
Sbjct: 236 GEAEKAIYVYKLM-ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 179 SSAMVDLYAKCGDVSSCRKIFDS-------------------------------MEEKDN 207
+A++D+++KCGD+ R+IFD+ MEEKD
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
+W+++I G RG++A+ F++M KPD+ + L AC ++ L+ G+ +H
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 268 MIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSR 327
+ K + + + L+ +YA G + +A +F I ++ + + ++I A G S+
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST- 473
Query: 328 SMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NAL 386
++ E+ + T I +L +C + + GR S + +P L + +
Sbjct: 474 AISYFNEM-IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 387 VHMYSECGQIGDAFKAFVDIVCKDDSS-WSSIIGTYKQNG 425
V + G + +A + + + D++ W +++ + +G
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG 572
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 168/370 (45%), Gaps = 39/370 (10%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P R++V+W LI+ + + G KA ++ M +P++ T L+ +C+ N G
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
+ + + +GL ++L+ M+S G ++ +A +F +L +R +V+W MISG+A+
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCG-DIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 122 GDFCMVQRLFSEMWE------------------------------VEGLKPDNRTFVSLL 151
G + ++LF +M E KPD T + L
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 152 KCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNF 208
CS LG + + IH K+ + + +++VD+YAKCG++S +F ++ +++
Sbjct: 397 SACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL 456
Query: 209 VWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQM 268
+++II G ++ A+ +F +M + PD+ L AC + TG QM
Sbjct: 457 TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQM 516
Query: 269 IKNGHQNDCFV-ASVLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMILA---HAQLGQ 323
+ N S+++ L G L +A++L + + D W +++ H +
Sbjct: 517 KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVEL 576
Query: 324 GSSRSMQLLQ 333
G + +LL+
Sbjct: 577 GEKAAKKLLE 586
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 7/221 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M ++VV W +I ++A A LF +M+ + +P+E T L AC+ +VG
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+ IH + + L + G+SLV MY+ G N+ +A VFH + R+ + + +I G A
Sbjct: 409 IWIHRYIEKYSLSLNVALGTSLVDMYAKCG-NISEALSVFHGIQTRNSLTYTAIIGGLAL 467
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
GD F+EM + G+ PD TF+ LL C G + + S+F
Sbjct: 468 HGDASTAISYFNEMIDA-GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQL 526
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISG 216
S MVDL + G + ++ +SM E D VW +++ G
Sbjct: 527 KHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFG 567
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 167/565 (29%), Positives = 288/565 (50%), Gaps = 27/565 (4%)
Query: 140 LKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGD---VSSCR 196
+K + +S L+ C +L E+ Q+HGL K + + S ++D C + +S R
Sbjct: 2 MKKHYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYAR 61
Query: 197 KIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIE 256
+F+S++ ++W+S+I GY+ + ++A+ F+++M ++ PD L+AC +
Sbjct: 62 SVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLR 121
Query: 257 DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMIL 316
D+ G VHG ++K G + + +V++ LL +Y G + ++F I ++VAW S+I
Sbjct: 122 DIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLIS 181
Query: 317 AHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV----- 371
+ S +++ +E+ ++ ++ ++ +L +C D+ G+ H +
Sbjct: 182 GFVNNNRFSD-AIEAFREM-QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 372 ---MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMES 428
+S V ++ +L+ MY++CG + A F + + SW+SII Y QNG
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 429 EALELCKEMLAEGI-----TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYV 483
EAL + +ML GI TF S I CSQL G+ H + K+G+ D +
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL-----GQSIHAYVSKTGFVKDAAI 354
Query: 484 GSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFT-MLEKNG 542
++++MYAK G E +KK F+ K + + + +I G A HG +A+ IF M EK
Sbjct: 355 VCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 414
Query: 543 VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA 602
TP+ +T+L +L ACSH G +E+ F M + ++P EHY C+VD RAGR EEA
Sbjct: 415 ATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEA 474
Query: 603 YQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEE 659
++V+ + + W LL+ C H N ++ ++ + E Y+LLSNIY +
Sbjct: 475 ERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKA 534
Query: 660 GKWEEARDCREKMAKTGVKKDPGSS 684
G+W + + RE M V K G S
Sbjct: 535 GRWADVKLIRESMKSKRVDKVLGHS 559
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 217/462 (46%), Gaps = 43/462 (9%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V W ++I + + + KA + +M P+ +TF +L+AC+ G +H
Sbjct: 71 SVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVH 130
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGS---NLRDACCVFHDLLERDLVAWNVMISGFAQV 121
G +V++G E + + + L++MY G LR VF D+ + ++VAW +ISGF
Sbjct: 131 GFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLR----VFEDIPQWNVVAWGSLISGFVNN 186
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAET---- 174
F F EM + G+K + V LL C +++ HG G +
Sbjct: 187 NRFSDAIEAFREM-QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQS 245
Query: 175 ----DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFF 230
+ +++++++D+YAKCGD+ + R +FD M E+ W+SII+GY+ N EEA+ F
Sbjct: 246 KVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMF 305
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
DM + PD+ S +RA + G +H + K G D + L+ +YA
Sbjct: 306 LDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKT 365
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
G A+K F ++ KD +AW +I+ A G G + ++ + Q + + G T +
Sbjct: 366 GDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHG-NEALSIFQRMQEKGNATPDGITYLG 424
Query: 351 ILKSCKNKSDLPAG-------RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF 403
+L +C + + G R +H L + +V H +V + S G+ +A +
Sbjct: 425 VLYACSHIGLVEEGQRYFAEMRDLHGL--EPTVEHY----GCMVDILSRAGRFEEAERLV 478
Query: 404 VDIVCKDDSS-WSSIIGTYKQNGME-SEALELC---KEMLAE 440
+ K + + W +++ NG + E LEL + M+AE
Sbjct: 479 KTMPVKPNVNIWGALL-----NGCDIHENLELTDRIRSMVAE 515
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 162/334 (48%), Gaps = 26/334 (7%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P NVV W +LIS + A + F +M+ + NE LL AC G
Sbjct: 168 IPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG 227
Query: 61 LQIHGVLVRSGLERDKF----------AGSSLVYMYSNNGSNLRDACCVFHDLLERDLVA 110
HG L GL D + +SL+ MY+ G +LR A +F + ER LV+
Sbjct: 228 KWFHGFL--QGLGFDPYFQSKVGFNVILATSLIDMYAKCG-DLRTARYLFDGMPERTLVS 284
Query: 111 WNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC-----CSTLGEVMQIHG 165
WN +I+G++Q GD +F +M ++ G+ PD TF+S+++ CS LG+ IH
Sbjct: 285 WNSIITGYSQNGDAEEALCMFLDMLDL-GIAPDKVTFLSVIRASMIQGCSQLGQ--SIHA 341
Query: 166 LASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEE 225
SK G DA + A+V++YAK GD S +K F+ +E+KD W+ +I G + G E
Sbjct: 342 YVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNE 401
Query: 226 AVHFFKDMC-KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA--SV 282
A+ F+ M K PD L AC I + G + +M ++ H + V
Sbjct: 402 ALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM-RDLHGLEPTVEHYGC 460
Query: 283 LLTLYANFGGLRDAEKLFRRIDDK-DIVAWNSMI 315
++ + + G +AE+L + + K ++ W +++
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 494
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 18/227 (7%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R +V+W ++I+ + + G +A +F DM + P++ TF ++RA +G
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG 336
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
IH + ++G +D +LV MY+ G + A F DL ++D +AW V+I G A
Sbjct: 337 QSIHAYVSKTGFVKDAAIVCALVNMYAKTG-DAESAKKAFEDLEKKDTIAWTVVIIGLAS 395
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG----------EVMQIHGLASKF 170
G +F M E PD T++ +L CS +G E+ +HGL
Sbjct: 396 HGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGL---- 451
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNF-VWSSIISG 216
E MVD+ ++ G ++ +M K N +W ++++G
Sbjct: 452 --EPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/529 (30%), Positives = 275/529 (51%), Gaps = 41/529 (7%)
Query: 192 VSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLS--STL 249
+ R++F+ + +++ +I+GYT +NR +A++ F +M P + V+S S +
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM------PVRDVVSWNSMI 104
Query: 250 RACVEIEDLNTGVQVHGQMIK------NGHQNDCFVA---------------------SV 282
CVE D+NT V++ +M + N CF + +
Sbjct: 105 SGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNS 164
Query: 283 LLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQ 342
++ Y FG + DA KLF+++ K++++W +MI Q + S ++ L + + R ++
Sbjct: 165 MVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQ-NERSGEALDLFKNMLRCC-IK 222
Query: 343 IQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKA 402
++ +C N G Q+H L++K + V +L+ Y+ C +IGD+ K
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKV 282
Query: 403 FVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAI 462
F + V + + W++++ Y N +AL + ML I + ++SCS L +
Sbjct: 283 FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTL 342
Query: 463 NVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGY 522
+ GK+ H A+K G D +VG+S++ MY+ G++ D+ VF K + V +N++I G
Sbjct: 343 DWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGC 402
Query: 523 AHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYK-IKP 581
A HG+ K A IF + + P+++TF +LSACSH G++E LF M I
Sbjct: 403 AQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDR 462
Query: 582 ESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKM 638
+ +HY+C+VD GR G+L+EA +++++ +E W LLSACR H++ GEK+A +
Sbjct: 463 KIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAI 522
Query: 639 IELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWLI 687
L+ A+Y+LLSNIY G+W R KM K G+ K PGSSW++
Sbjct: 523 FNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVV 571
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 229/464 (49%), Gaps = 27/464 (5%)
Query: 91 SNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSL 150
+ L DA +F ++ RD+V+WN MISG + GD +LF EM E + ++ ++
Sbjct: 80 NRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV-----SWTAM 134
Query: 151 LKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
+ C G+V Q L + + D ++MV Y + G V K+F M K+ W
Sbjct: 135 VNGCFRSGKVDQAERLFYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISW 193
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
+++I G N R EA+ FK+M + +K + + AC + G+QVHG +IK
Sbjct: 194 TTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIK 253
Query: 271 NGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQ 330
G + +V++ L+T YAN + D+ K+F + + W +++ ++ L + ++
Sbjct: 254 LGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYS-LNKKHEDALS 312
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMY 390
+ + R + L Q +T + L SC L G+++H + +K + VGN+LV MY
Sbjct: 313 IFSGMLRNSILPNQ-STFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMY 371
Query: 391 SECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEML-----AEGITFT 445
S+ G + DA F+ I K SW+SII Q+G A + +M+ + ITFT
Sbjct: 372 SDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFT 431
Query: 446 SYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH---DVYVGSSIIDMYAKCGHMEDSKK 502
+S+CS + G++ + + SG NH + + ++D+ +CG ++++++
Sbjct: 432 GL-----LSACSHCGFLEKGRKL-FYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEE 485
Query: 503 VFDAQ-VKPNEVIYNAMICGYAHHGQA----KQAIEIFTMLEKN 541
+ + VKPNE+++ A++ H K A IF + K+
Sbjct: 486 LIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 196/417 (47%), Gaps = 50/417 (11%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+VV+WT +++ R+G V +A +LF M V D A WN
Sbjct: 123 MPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKD-----------------TAAWN-- 163
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
S+V+ Y G + DA +F + +++++W MI G Q
Sbjct: 164 --------------------SMVHGYLQFG-KVDDALKLFKQMPGKNVISWTTMICGLDQ 202
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
LF M +K +R F ++ C+ +Q+HGL K G +
Sbjct: 203 NERSGEALDLFKNMLRC-CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
VS++++ YA C + RK+FD + VW++++SGY++N + E+A+ F M +
Sbjct: 262 VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS 321
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
+ P+Q +S L +C + L+ G ++HG +K G + D FV + L+ +Y++ G + DA
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAV 381
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
+F +I K IV+WNS+I+ AQ G+G + + ++ R + T +L +C +
Sbjct: 382 SVFIKIFKKSIVSWNSIIVGCAQHGRG-KWAFVIFGQMIRLNK-EPDEITFTGLLSACSH 439
Query: 358 KSDLPAGRQIHSLVMKSSVSH---PTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
L GR++ M S ++H +V + CG++ +A + +V K +
Sbjct: 440 CGFLEKGRKLF-YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPN 495
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/537 (31%), Positives = 283/537 (52%), Gaps = 26/537 (4%)
Query: 164 HGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRG 223
H L+ + + ++++ ++++YAKCG++ R++FD+M E++ W+++I+GY
Sbjct: 84 HMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNE 143
Query: 224 EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL 283
+E F M P++ LSS L +C G QVHG +K G +VA+ +
Sbjct: 144 QEGFCLFSSMLSH-CFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAV 198
Query: 284 LTLYA---NFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTS 340
+++Y + +A +F I K++V WNSMI A G +++ + +H +
Sbjct: 199 ISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGK-KAIGVFMRMH-SDG 256
Query: 341 LQIQGATLIAILKSCKNKSDLPAGR------QIHSLVMKSSVSHPTLVGNALVHMYSECG 394
+ ATL+ I S SDL Q+HSL +KS + T V AL+ +YSE
Sbjct: 257 VGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEML 316
Query: 395 Q-IGDAFKAFVDIV-CKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC 452
+ D +K F+++ C+D +W+ II + E A+ L ++ E ++ Y+
Sbjct: 317 EDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPE-RAIHLFGQLRQEKLSPDWYTFSSV 375
Query: 453 ISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNE 512
+ +C+ L+ H IK G+ D + +S+I YAKCG ++ +VFD +
Sbjct: 376 LKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDV 435
Query: 513 VIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTL 572
V +N+M+ Y+ HGQ + +F +K + P+ TF+A+LSACSHAG +E+ L +F
Sbjct: 436 VSWNSMLKAYSLHGQVDSILPVF---QKMDINPDSATFIALLSACSHAGRVEEGLRIFRS 492
Query: 573 MLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTK 629
M K + P+ HY+C++D RA R EA +++++ D W LL +CR H NT+
Sbjct: 493 MFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTR 552
Query: 630 IGEKSAKKMIEL-NPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSW 685
+G+ +A K+ EL P++ SYI +SNIY EG + EA ++M V+K+P SW
Sbjct: 553 LGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSW 609
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 225/443 (50%), Gaps = 33/443 (7%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNVV+WT LI+ +++AG+ + F LF+ M + PNE+T S +L +C + G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCR----YEPG 176
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYS--NNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
Q+HG+ ++ GL + ++++ MY ++G+ +A VF + ++LV WN MI+ F
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL--------GEV----MQIHGL 166
+F M +G+ D T LL CS+L EV +Q+H L
Sbjct: 237 QCCNLGKKAIGVFMRM-HSDGVGFDRAT---LLNICSSLYKSSDLVPNEVSKCCLQLHSL 292
Query: 167 ASKFGAETDAVVSSAMVDLYAK-CGDVSSCRKIFDSMEE-KDNFVWSSIISGYTVNNRGE 224
K G T V++A++ +Y++ D + C K+F M +D W+ II+ + V + E
Sbjct: 293 TVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PE 351
Query: 225 EAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL 284
A+H F + ++++ PD + SS L+AC + + +H Q+IK G D + + L+
Sbjct: 352 RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLI 411
Query: 285 TLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQ 344
YA G L ++F +D +D+V+WNSM+ A++ GQ S + + + +
Sbjct: 412 HAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDS-----ILPVFQKMDINPD 466
Query: 345 GATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAF 403
AT IA+L +C + + G +I + + + P L A ++ M S + +A +
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVI 526
Query: 404 VDIVCKDDS-SWSSIIGTYKQNG 425
+ D+ W +++G+ +++G
Sbjct: 527 KQMPMDPDAVVWIALLGSCRKHG 549
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 139/586 (23%), Positives = 272/586 (46%), Gaps = 36/586 (6%)
Query: 17 LRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGL--ER 74
+R+G + +A LF V E ++ ++ L +ACA G+ +H ++ +
Sbjct: 37 VRSGDIRRAVSLFYSAPV--ELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQ 94
Query: 75 DKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD----FCMVQRL 130
+ + L+ MY+ G N+ A VF + ER++V+W +I+G+ Q G+ FC+ +
Sbjct: 95 NVILANFLINMYAKCG-NILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 131 FSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCG 190
S + P+ T S+L C Q+HGLA K G V++A++ +Y +C
Sbjct: 154 LSHCF------PNEFTLSSVLTSCR-YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCH 206
Query: 191 DVSSCRK---IFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSS 247
D ++ + +F++++ K+ W+S+I+ + N G++A+ F M V D+ L +
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266
Query: 248 TLRACVEIEDLNTG------VQVHGQMIKNGHQNDCFVASVLLTLYAN-FGGLRDAEKLF 300
+ + DL +Q+H +K+G VA+ L+ +Y+ D KLF
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLF 326
Query: 301 RRIDD-KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKS 359
+ +DIVAWN +I A A R++ L +L R L T ++LK+C
Sbjct: 327 MEMSHCRDIVAWNGIITAFAVY--DPERAIHLFGQL-RQEKLSPDWYTFSSVLKACAGLV 383
Query: 360 DLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIG 419
IH+ V+K T++ N+L+H Y++CG + + F D+ +D SW+S++
Sbjct: 384 TARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLK 443
Query: 420 TYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQFHVFAIKSGYN 478
Y +G L + ++M I S + +S+CS + G + F K
Sbjct: 444 AYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETL 500
Query: 479 HDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTM 537
+ + +IDM ++ ++++V + P+ V++ A++ HG +
Sbjct: 501 PQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADK 560
Query: 538 LEKNGVTPNQVTFLAMLSACSHAG-YIEDTLNLFTLMLYKYKIKPE 582
L++ N ++++ M + + G + E L++ + ++ + +P+
Sbjct: 561 LKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPD 606
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/541 (30%), Positives = 285/541 (52%), Gaps = 17/541 (3%)
Query: 151 LKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
L C+ L +V Q+H + D ++ ++ + C + ++F+ ++E + +
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
+S+I + N++ +A F +M + + D L+AC L +H + K
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 271 NGHQNDCFVASVLLTLYANFGGL--RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRS 328
G +D +V + L+ Y+ GGL RDA KLF ++ ++D V+WNSM+ + G+ +
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD-A 204
Query: 329 MQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVH 388
+L E+ + I T++ C+ S A + +++VS T+V
Sbjct: 205 RRLFDEMPQRD--LISWNTMLDGYARCREMSK--AFELFEKMPERNTVSWSTMVMG---- 256
Query: 389 MYSECGQIGDAFKAF--VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTS 446
YS+ G + A F + + K+ +W+ II Y + G+ EA L +M+A G+ F +
Sbjct: 257 -YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDA 315
Query: 447 YSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA 506
++ +++C++ +++G + H +S + YV ++++DMYAKCG+++ + VF+
Sbjct: 316 AAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND 375
Query: 507 QVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDT 566
K + V +N M+ G HG K+AIE+F+ + + G+ P++VTF+A+L +C+HAG I++
Sbjct: 376 IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Query: 567 LNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACR 623
++ F M Y + P+ EHY CLVD GR GRL+EA ++VQ E W LL ACR
Sbjct: 436 IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACR 495
Query: 624 NHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGS 683
HN I ++ +++L+P D +Y LLSNIY WE D R KM GV+K G+
Sbjct: 496 MHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGA 555
Query: 684 S 684
S
Sbjct: 556 S 556
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 214/445 (48%), Gaps = 29/445 (6%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
NV +LI +H + +AF +F++M+ + +T+ LL+AC+ + V +H
Sbjct: 81 NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 65 GVLVRSGLERDKFAGSSLVYMYSN-NGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
+ + GL D + ++L+ YS G +RDA +F + ERD V+WN M+ G + G+
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMV 183
+RLF EM + D ++ ++L + E+ + L K E + V S MV
Sbjct: 201 LRDARRLFDEM-----PQRDLISWNTMLDGYARCREMSKAFELFEKM-PERNTVSWSTMV 254
Query: 184 DLYAKCGDVSSCRKIFDSM--EEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPD 241
Y+K GD+ R +FD M K+ W+ II+GY +EA M +K D
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR 301
+ S L AC E L+ G+++H + ++ ++ +V + LL +YA G L+ A +F
Sbjct: 315 AAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 374
Query: 302 RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
I KD+V+WN+M+ G G +++L + R ++ T IA+L SC + +
Sbjct: 375 DIPKKDLVSWNTMLHGLGVHGHGKE-AIELFSRMRR-EGIRPDKVTFIAVLCSCNHAGLI 432
Query: 362 PAG-------RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS- 413
G +++ LV V H LV + G++ +A K + + +
Sbjct: 433 DEGIDYFYSMEKVYDLV--PQVEH----YGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVI 486
Query: 414 WSSIIGTYKQNGMESEALELCKEML 438
W +++G + M +E +++ KE+L
Sbjct: 487 WGALLGACR---MHNE-VDIAKEVL 507
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 185/394 (46%), Gaps = 17/394 (4%)
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR 301
+ + L+ + +LN Q+H Q+I+ D +A L++ + A ++F
Sbjct: 16 RRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFN 75
Query: 302 RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
++ + ++ NS+I AHAQ Q ++ + E+ R L T +LK+C +S L
Sbjct: 76 QVQEPNVHLCNSLIRAHAQNSQ-PYQAFFVFSEMQR-FGLFADNFTYPFLLKACSGQSWL 133
Query: 362 PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIG--DAFKAFVDIVCKDDSSWSSIIG 419
P + +H+ + K +S V NAL+ YS CG +G DA K F + +D SW+S++G
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLG 193
Query: 420 TYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH 479
+ G +A L EM + + L + C ++ K F +F N
Sbjct: 194 GLVKAGELRDARRLFDEMPQRDLISWNTMLD-GYARCREM-----SKAFELFEKMPERNT 247
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVFDAQVKP--NEVIYNAMICGYAHHGQAKQAIEIFTM 537
+ S+++ Y+K G ME ++ +FD P N V + +I GYA G K+A +
Sbjct: 248 VSW--STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 538 LEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAG 597
+ +G+ + +++L+AC+ +G + + + ++ L + + + + L+D Y + G
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSI-LKRSNLGSNAYVLNALLDMYAKCG 364
Query: 598 RLEEAYQIVQKDGSES--AWRTLLSACRNHNNTK 629
L++A+ + + +W T+L H + K
Sbjct: 365 NLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGK 398
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 161/329 (48%), Gaps = 27/329 (8%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R+ V+W +++ ++AG + A +LF++M D +++ +L A +
Sbjct: 180 MSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD----LISWNTMLDGYARCREMSKA 235
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFH--DLLERDLVAWNVMISGF 118
+ L ER+ + S++V YS G ++ A +F L +++V W ++I+G+
Sbjct: 236 FE----LFEKMPERNTVSWSTMVMGYSKAG-DMEMARVMFDKMPLPAKNVVTWTIIIAGY 290
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETD 175
A+ G RL +M GLK D +S+L C+ G + M+IH + + ++
Sbjct: 291 AEKGLLKEADRLVDQM-VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
A V +A++D+YAKCG++ +F+ + +KD W++++ G V+ G+EA+ F M +
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQM------IKNGHQNDCFVASVLLTLYAN 289
+ ++PD+ + L +C ++ G+ M + C V L
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLV-----DLLGR 464
Query: 290 FGGLRDAEKLFRRID-DKDIVAWNSMILA 317
G L++A K+ + + + ++V W +++ A
Sbjct: 465 VGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 137/324 (42%), Gaps = 72/324 (22%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM------------------------RVM- 35
MP R++++W T++ + R + KAF+LF M RVM
Sbjct: 211 MPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 36 DERP----NEYTFSVL-----------------------------------LRACATPAL 56
D+ P N T++++ L AC L
Sbjct: 271 DKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGL 330
Query: 57 WNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMIS 116
++G++IH +L RS L + + ++L+ MY+ G NL+ A VF+D+ ++DLV+WN M+
Sbjct: 331 LSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG-NLKKAFDVFNDIPKKDLVSWNTMLH 389
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGA 172
G G LFS M EG++PD TF+++L C+ G + + + + +
Sbjct: 390 GLGVHGHGKEAIELFSRM-RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV-WSSIISGYTVNNRGEEAVHFFK 231
+VDL + G + K+ +M + N V W +++ ++N + A
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
Query: 232 DMCK-QRVKPDQHVLSSTLRACVE 254
++ K P + L S + A E
Sbjct: 509 NLVKLDPCDPGNYSLLSNIYAAAE 532
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/671 (27%), Positives = 320/671 (47%), Gaps = 46/671 (6%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGV 66
+T T I HL G+V KA + + E + + + L R+C++ AL ++
Sbjct: 30 LTVTRQILEHLEGGNVSKAVSV---LFASPEPVSYWLYERLFRSCSSKALVVQARKVQSH 86
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCM 126
LV F + + Y G + DA +F ++ ERD +WN +I+ AQ G
Sbjct: 87 LVTFSPLPPIFLLNRAIEAYGKCGC-VDDARELFEEMPERDGGSWNAVITACAQNGVSDE 145
Query: 127 VQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMV 183
V R+F M +G++ +F +LK C + ++ Q+H K+G + + +++V
Sbjct: 146 VFRMFRRM-NRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIV 204
Query: 184 DLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQH 243
D+Y KC +S R++FD + + W+ I+ Y +EAV F M + V+P H
Sbjct: 205 DVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH 264
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRI 303
+SS + AC L G +H +K D V++ + +Y L A ++F +
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 304 DDKDIVAWNSMILAHAQLG--QGSSRSMQLLQE--------------------------- 334
KD+ +W S + +A G + + L+ E
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLT 384
Query: 335 LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECG 394
L R I TL+ IL C SD+ G+Q H + + +V NAL+ MY +CG
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCG 444
Query: 395 QIGDA---FKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL 451
+ A F+ ++ +D+ SW++++ + G +AL + M E + Y+L
Sbjct: 445 TLQSANIWFRQMSEL--RDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKP-SKYTLAT 501
Query: 452 CISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPN 511
++ C+ + A+N+GK H F I+ GY DV + +++DMY+KC + + +VF +
Sbjct: 502 LLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRD 561
Query: 512 EVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFT 571
+++N++I G +G++K+ E+F +LE GV P+ VTFL +L AC G++E F+
Sbjct: 562 LILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFS 621
Query: 572 LMLYKYKIKPESEHYSCLVDAYGRAG---RLEEAYQIVQKDGSESAWRTLLSACRNHNNT 628
M KY I P+ EHY C+++ Y + G +LEE ++ D + AC+ + +
Sbjct: 622 SMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWS 681
Query: 629 KIGEKSAKKMI 639
K+G +AK+++
Sbjct: 682 KLGAWAAKRLM 692
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/537 (25%), Positives = 243/537 (45%), Gaps = 53/537 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+ +W +I++ + G + F++F M R E +F+ +L++C +
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+H +V+ G + +S+V +Y + DA VF +++ V+WNV++ + +
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVY-GKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLE 240
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST-----LGEVMQIHGLASKFGAETD 175
+G +F +M E+ ++P N T S++ CS +G+V IH +A K D
Sbjct: 241 MGFNDEAVVMFFKMLEL-NVRPLNHTVSSVMLACSRSLALEVGKV--IHAIAVKLSVVAD 297
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
VVS+++ D+Y KC + S R++FD KD W+S +SGY ++ EA F M +
Sbjct: 298 TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 236 QRV-------------------------------KPDQHVLSSTLRACVEIEDLNTGVQV 264
+ + D L L C I D+ G Q
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA 417
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD-KDIVAWNSMILAHAQLGQ 323
HG + ++G+ + VA+ LL +Y G L+ A FR++ + +D V+WN+++ A++G+
Sbjct: 418 HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGR 477
Query: 324 GSSRSMQLLQELHRTTSLQIQGA----TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHP 379
Q L +Q++ TL +L C N L G+ IH +++
Sbjct: 478 SE-------QALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKID 530
Query: 380 TLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLA 439
++ A+V MYS+C A + F + +D W+SII +NG E EL +
Sbjct: 531 VVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLEN 590
Query: 440 EGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSGYNHDVYVGSSIIDMYAKCG 495
EG+ + + +C + + +G Q F + K + V +I++Y K G
Sbjct: 591 EGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYG 647
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 198/440 (45%), Gaps = 38/440 (8%)
Query: 249 LRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDI 308
R+C + +V ++ F+ + + Y G + DA +LF + ++D
Sbjct: 68 FRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDG 127
Query: 309 VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIH 368
+WN++I A AQ G S ++ + ++R ++ + +LKSC DL RQ+H
Sbjct: 128 GSWNAVITACAQNGV-SDEVFRMFRRMNRD-GVRATETSFAGVLKSCGLILDLRLLRQLH 185
Query: 369 SLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMES 428
V+K S + ++V +Y +C + DA + F +IV D SW+ I+ Y + G
Sbjct: 186 CAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFND 245
Query: 429 EALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSII 488
EA+ + +ML + ++++ + +CS+ LA+ VGK H A+K D V +S+
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVF 305
Query: 489 DMYAKCGHMEDSKKVFDA-----------------------------QVKP--NEVIYNA 517
DMY KC +E +++VFD + P N V +NA
Sbjct: 306 DMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNA 365
Query: 518 MICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKY 577
M+ GY H + +A++ T++ + + VT + +L+ CS ++ +Y++
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGF-IYRH 424
Query: 578 KIKPESEHYSCLVDAYGRAGRLEEA---YQIVQKDGSESAWRTLLSACRNHNNTKIGEKS 634
+ L+D YG+ G L+ A ++ + + E +W LL+ ++
Sbjct: 425 GYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSF 484
Query: 635 AKKM-IELNPSDHASYILLS 653
+ M +E PS + LL+
Sbjct: 485 FEGMQVEAKPSKYTLATLLA 504
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 164/321 (51%), Gaps = 10/321 (3%)
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD 410
+ +SC +K+ + R++ S ++ S P + N + Y +CG + DA + F ++ +D
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 411 DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHV 470
SW+++I QNG+ E + + M +G+ T S + SC +L + + +Q H
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHC 186
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQ 530
+K GY+ +V + +SI+D+Y KC M D+++VFD V P++V +N ++ Y G +
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDE 246
Query: 531 AIEI-FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCL 589
A+ + F MLE N V P T +++ ACS + +E + + K + ++ + +
Sbjct: 247 AVVMFFKMLELN-VRPLNHTVSSVMLACSRSLALE-VGKVIHAIAVKLSVVADTVVSTSV 304
Query: 590 VDAYGRAGRLEEAYQIVQKDGSE--SAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDH- 646
D Y + RLE A ++ + S+ +W + +S T + A+++ +L P +
Sbjct: 305 FDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT----REARELFDLMPERNI 360
Query: 647 ASYILLSNIYIEEGKWEEARD 667
S+ + Y+ +W+EA D
Sbjct: 361 VSWNAMLGGYVHAHEWDEALD 381
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 140/310 (45%), Gaps = 18/310 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RN+V+W ++ ++ A +A MR E + T +L C+ + +G
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG 414
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE-RDLVAWNVMISGFA 119
Q HG + R G + + ++L+ MY G+ L+ A F + E RD V+WN +++G A
Sbjct: 415 KQAHGFIYRHGYDTNVIVANALLDMYGKCGT-LQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDA 176
+VG F M +VE KP T +LL C+ + + IHG + G + D
Sbjct: 474 RVGRSEQALSFFEGM-QVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDV 531
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V+ AMVD+Y+KC ++F +D +W+SII G N R +E F + +
Sbjct: 532 VIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENE 591
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH------QNDCFVASVLLTLYANF 290
VKPD L+AC+ + G Q M H DC ++ LY +
Sbjct: 592 GVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDC-----MIELYCKY 646
Query: 291 GGLRDAEKLF 300
G L E+
Sbjct: 647 GCLHQLEEFL 656
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 256/458 (55%), Gaps = 6/458 (1%)
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFG 291
D+ + D+ ++ L+ C + L G VH ++++ ++D + + LL +YA G
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
L +A K+F ++ +D V W ++I ++Q + + Q L S TL ++
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS--PNEFTLSSV 167
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
+K+ + G Q+H +K VG+AL+ +Y+ G + DA F + ++D
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
SW+++I + + +ALEL + ML +G + +S +CS + GK H +
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
IKSG + G++++DMYAK G + D++K+FD K + V +N+++ YA HG K+A
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
+ F + + G+ PN+++FL++L+ACSH+G +++ + + LM K I PE+ HY +VD
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVD 406
Query: 592 AYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHAS 648
GRAG L A + +++ + + + W+ LL+ACR H NT++G +A+ + EL+P D
Sbjct: 407 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP 466
Query: 649 YILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+++L NIY G+W +A R+KM ++GVKK+P SW+
Sbjct: 467 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 192/384 (50%), Gaps = 18/384 (4%)
Query: 44 FSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL 103
++ LL+ C L G +H +++S D G++L+ MY+ GS L +A VF +
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS-LEEARKVFEKM 121
Query: 104 LERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK--------CCS 155
+RD V W +ISG++Q C F++M G P+ T S++K CC
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRF-GYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 156 TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIIS 215
Q+HG K G +++ V SA++DLY + G + + +FD++E +++ W+++I+
Sbjct: 181 H-----QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 216 GYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQN 275
G+ + E+A+ F+ M + +P +S AC L G VH MIK+G +
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 276 DCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQEL 335
F + LL +YA G + DA K+F R+ +D+V+WNS++ A+AQ G G ++ +E+
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE-AVWWFEEM 354
Query: 336 HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQ 395
R ++ + +++L +C + L G + L+ K + +V + G
Sbjct: 355 RR-VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 396 IGDAFKAFVDIVCKDDSS-WSSII 418
+ A + ++ + ++ W +++
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALL 437
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 162/321 (50%), Gaps = 6/321 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+ VTWTTLIS + + A FN M PNE+T S +++A A G
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+HG V+ G + + GS+L+ +Y+ G + DA VF L R+ V+WN +I+G A+
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGL-MDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAV 177
LF M +G +P + ++ SL CS+ G + Q +H K G + A
Sbjct: 240 RSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
+ ++D+YAK G + RKIFD + ++D W+S+++ Y + G+EAV +F++M +
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
++P++ S L AC L+ G + M K+G + + ++ L G L A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 298 KLFRRIDDKDIVA-WNSMILA 317
+ + + A W +++ A
Sbjct: 419 RFIEEMPIEPTAAIWKALLNA 439
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 238/394 (60%), Gaps = 6/394 (1%)
Query: 296 AEKLFRRIDDK-DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
A K+F +I+ ++ WN++I +A++G S + L +E+ + ++ T ++K+
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSIS-AFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
+D+ G IHS+V++S V N+L+H+Y+ CG + A+K F + KD +W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+S+I + +NG EAL L EM ++GI +++ +S+C+++ A+ +GK+ HV+ IK
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
G +++ + ++D+YA+CG +E++K +FD V N V + ++I G A +G K+AIE+
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 535 FTMLEKN-GVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAY 593
F +E G+ P ++TF+ +L ACSH G +++ F M +YKI+P EH+ C+VD
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 594 GRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYI 650
RAG++++AY+ ++ + WRTLL AC H ++ + E + ++++L P+ Y+
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 651 LLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
LLSN+Y E +W + + R++M + GVKK PG S
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 464
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 191/374 (51%), Gaps = 12/374 (3%)
Query: 62 QIHGVLVRSGLE-RDKFAGSSLVYMYSNNGSN--LRDACCVFHDLLER-DLVAWNVMISG 117
QIH +R G+ D G L++ + S + A VF + + ++ WN +I G
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRG 94
Query: 118 FAQVGDFCMVQRLFSEMWEVEGL-KPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAE 173
+A++G+ L+ EM V GL +PD T+ L+K +T+ +V IH + + G
Sbjct: 95 YAEIGNSISAFSLYREM-RVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ V ++++ LYA CGDV+S K+FD M EKD W+S+I+G+ N + EEA+ + +M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
+ +KPD + S L AC +I L G +VH MIK G + ++VLL LYA G +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
+A+ LF + DK+ V+W S+I+ A G G +++L + + T L T + IL
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFG-KEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDS 412
+C + + G + + + P + +V + + GQ+ A++ + + +
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 413 S-WSSIIGTYKQNG 425
W +++G +G
Sbjct: 393 VIWRTLLGACTVHG 406
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 179/348 (51%), Gaps = 17/348 (4%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMD-ERPNEYTFSVLLRACATPALWNVGLQI 63
NV W TLI + G+ AF L+ +MRV P+ +T+ L++A T A +G I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
H V++RSG + +SL+++Y+N G ++ A VF + E+DLVAWN +I+GFA+ G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCG-DVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSS 180
L++EM +G+KPD T VSLL C+ +G + ++H K G + S+
Sbjct: 203 PEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 261
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM-CKQRVK 239
++DLYA+CG V + +FD M +K++ W+S+I G VN G+EA+ FK M + +
Sbjct: 262 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 321
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASV--LLTLYANFGGLRDAE 297
P + L AC + G + +M + ++ + + ++ L A G ++ A
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAGQVKKAY 380
Query: 298 KLFRRID-DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQ 344
+ + + ++V W +++ A G L E R LQ++
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGDSD------LAEFARIQILQLE 422
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 136/281 (48%), Gaps = 15/281 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP +++V W ++I+ G +A L+ +M +P+ +T LL ACA +G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++H +++ GL R+ + + L+ +Y+ G + +A +F ++++++ V+W +I G A
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCG-RVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G LF M EGL P TFV +L CS G V + + ++ E
Sbjct: 301 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 360
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV-WSSIISGYTVNNRGEEAVHFFKDMCK 235
MVDL A+ G V + SM + N V W +++ TV+ G+ + F +
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQI 418
Query: 236 QRVKPDQ---HVLSSTLRACVEIEDLNTGVQ-VHGQMIKNG 272
+++P+ +VL S + A E + VQ + QM+++G
Sbjct: 419 LQLEPNHSGDYVLLSNMYAS---EQRWSDVQKIRKQMLRDG 456
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/598 (27%), Positives = 298/598 (49%), Gaps = 94/598 (15%)
Query: 94 RDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNR--TFVSLL 151
RDA +F ++ +R++++WN ++SG+ + G+ +++F L P+ ++ +L+
Sbjct: 65 RDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFD-------LMPERNVVSWTALV 117
Query: 152 KCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWS 211
K G+V L K E + V + M+ + + G + K+++ + +KDN +
Sbjct: 118 KGYVHNGKVDVAESLFWKM-PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIART 176
Query: 212 SIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
S+I G R +EA F +M ++ V
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERSV--------------------------------- 203
Query: 272 GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQL 331
+ ++T Y + DA K+F + +K V+W SM++ + Q G+ ++
Sbjct: 204 ------ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGR-----IED 252
Query: 332 LQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYS 391
+EL ++ P + NA++
Sbjct: 253 AEELFEVMPVK------------------------------------PVIACNAMISGLG 276
Query: 392 ECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL 451
+ G+I A + F + ++D+SW ++I +++NG E EAL+L M +G+ T +L
Sbjct: 277 QKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Query: 452 CISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPN 511
+S C+ L +++ GKQ H ++ ++ DVYV S ++ MY KCG + SK +FD +
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD 396
Query: 512 EVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVT-PNQVTFLAMLSACSHAGYIEDTLNLF 570
+++N++I GYA HG ++A+++F + +G T PN+VTF+A LSACS+AG +E+ L ++
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 571 TLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNN 627
M + +KP + HY+C+VD GRAGR EA +++ + + W +LL ACR H+
Sbjct: 457 ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516
Query: 628 TKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSW 685
+ E AKK+IE+ P + +YILLSN+Y +G+W + + R+ M V+K PG SW
Sbjct: 517 LDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSW 574
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 211/442 (47%), Gaps = 19/442 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNVV+WT L+ ++ G V A LF M N+ +++V+L +
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQDGRIDDA 160
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+++ ++ ++D A +S+++ G + +A +F ++ ER ++ W M++G+ Q
Sbjct: 161 CKLYEMIP----DKDNIARTSMIHGLCKEG-RVDEAREIFDEMSERSVITWTTMVTGYGQ 215
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
+++F M E + ++ S+L G + L + + +
Sbjct: 216 NNRVDDARKIFDVMPEKTEV-----SWTSMLMGYVQNGRIEDAEELFEVMPVKP-VIACN 269
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
AM+ + G+++ R++FDSM+E+++ W ++I + N EA+ F M KQ V+P
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
L S L C + L+ G QVH Q+++ D +VASVL+T+Y G L ++ +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
R KDI+ WNS+I +A G G ++++ E+ + S + T +A L +C
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEE-ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSII 418
+ G +I+ + P A +V M G+ +A + + + D++ W S++
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 419 GTYKQNGMESEALELCKEMLAE 440
G + + + + E C + L E
Sbjct: 509 GACRTHS-QLDVAEFCAKKLIE 529
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 151/347 (43%), Gaps = 36/347 (10%)
Query: 280 ASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAH-AQLGQGSSRSMQLLQELHRT 338
A+V +T + G + +A KLF D K I +WNSM+ + A L +R +L E+
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDAR--KLFDEMPDR 77
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
+ G ++ ++ R++ L+ + +V T ALV Y G++
Sbjct: 78 NIISWNG-----LVSGYMKNGEIDEARKVFDLMPERNVVSWT----ALVKGYVHNGKVDV 128
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLA--EGITFTSYSLPLCISSC 456
A F + K+ SW+ ++ + Q+G +A +L EM+ + I TS LC
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL-YEMIPDKDNIARTSMIHGLCKEG- 186
Query: 457 SQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYN 516
V + +F S V ++++ Y + ++D++K+FD + EV +
Sbjct: 187 ------RVDEAREIFDEMS--ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWT 238
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
+M+ GY +G+ + A E+F ++ V + AM+S G I +F M +
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVMPVKPV----IACNAMISGLGQKGEIAKARRVFDSMKER 294
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEA---YQIVQKDGSESAWRTLLS 620
+ ++ + R G EA + ++QK G + TL+S
Sbjct: 295 -----NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 57/302 (18%)
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELC 434
S + P N + S G+I +A K F K SSW+S++ Y N M +A +L
Sbjct: 12 STTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF 71
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKC 494
EM + ++ + ++ Y K
Sbjct: 72 DEM---------------------------------------PDRNIISWNGLVSGYMKN 92
Query: 495 GHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF-TMLEKNGVTPNQVTFLAM 553
G +++++KVFD + N V + A++ GY H+G+ A +F M EK N+V++ M
Sbjct: 93 GEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK-----NKVSWTVM 147
Query: 554 LSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES 613
L G I+D L+ ++ K I S ++ + GR++EA +I + S
Sbjct: 148 LIGFLQDGRIDDACKLYEMIPDKDNIARTS-----MIHGLCKEGRVDEAREIFDEMSERS 202
Query: 614 --AWRTLLSACRNHNNTKIGEKSAKKMIELNPSD-HASYILLSNIYIEEGKWEEARDCRE 670
W T+++ +N A+K+ ++ P S+ + Y++ G+ E+A + E
Sbjct: 203 VITWTTMVTGYGQNNRV----DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFE 258
Query: 671 KM 672
M
Sbjct: 259 VM 260
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/570 (27%), Positives = 288/570 (50%), Gaps = 44/570 (7%)
Query: 160 VMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTV 219
V+Q+H F + D ++S ++ Y + +FD + ++ F +++++ YT
Sbjct: 41 VLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 220 NNRGEEAVHFFKD------MCKQRVKPDQHVLSSTLRACVEIEDLNTGV---QVHGQMIK 270
+A F +PD +S L+A +D G QVHG +I+
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 271 NGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQ 330
G +D FV + ++T Y + A K+F + ++D+V+WNSMI ++Q G +
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED-CKK 219
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMY 390
+ + + + + G T+I++ ++C SDL G ++H ++++ + + NA++ Y
Sbjct: 220 MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFY 279
Query: 391 SECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT------- 443
++CG + A F ++ KD ++ +II Y +G+ EA+ L EM + G++
Sbjct: 280 AKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMIS 339
Query: 444 -----------FTSY-------SLPLCISSCSQLLAINV------GKQFHVFAIKSGYNH 479
S+ S P ++ S L ++ GK+ H FAI++G ++
Sbjct: 340 GLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADN 399
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLE 539
++YV +SIID YAK G + +++VFD + + + A+I YA HG + A +F ++
Sbjct: 400 NIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQ 459
Query: 540 KNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRL 599
G P+ VT A+LSA +H+G + ++F ML KY I+P EHY+C+V RAG+L
Sbjct: 460 CLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKL 519
Query: 600 EEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIY 656
+A + + K D W LL+ + +I + ++ E+ P + +Y +++N+Y
Sbjct: 520 SDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLY 579
Query: 657 IEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ G+WEEA R KM + G+KK PG+SW+
Sbjct: 580 TQAGRWEEAEMVRNKMKRIGLKKIPGTSWI 609
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 193/402 (48%), Gaps = 41/402 (10%)
Query: 38 RPNEYTFSVLLRA---CATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLR 94
RP+ + S +L+A C L ++ Q+HG ++R G + D F G+ ++ Y+ N+
Sbjct: 126 RPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYT-KCDNIE 184
Query: 95 DACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
A VF ++ ERD+V+WN MISG++Q G F ++++ M KP+ T +S+ + C
Sbjct: 185 SARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQAC 244
Query: 155 STLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWS 211
++ +++H + + D + +A++ YAKCG + R +FD M EKD+ +
Sbjct: 245 GQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYG 304
Query: 212 SIISGYTV-------------------------------NNRGEEAVHFFKDMCKQRVKP 240
+IISGY NN EE ++ F++M + +P
Sbjct: 305 AIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRP 364
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
+ LSS L + +L G ++H I+NG N+ +V + ++ YA G L A+++F
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
D+ ++AW ++I A+A G S S L + + + TL A+L + + D
Sbjct: 425 DNCKDRSLIAWTAIITAYAV--HGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGD 482
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFK 401
+ I ++ P + A +V + S G++ DA +
Sbjct: 483 SDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAME 524
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 145/607 (23%), Positives = 263/607 (43%), Gaps = 113/607 (18%)
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
LQ+H +V ++ D F S L+ Y+ R A VF ++ R+ ++N ++ +
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQ-DRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 121 VGDFCMVQRLF-----SEMWEVEGLKPDNRTFVSLLKCCST-----LGEVM-QIHGLASK 169
+ LF S + + +PD+ + +LK S LG + Q+HG +
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 170 FGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHF 229
G ++D V + M+ Y KC ++ S RK+FD M E+D W+S+ISGY+ + E+
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 230 FKDMCK-QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
+K M KP+ + S +AC + DL G++VH +MI+N Q D + + ++ YA
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYA 280
Query: 289 NFGGLRDAEKLFRRIDDKDIVAWNSMI---LAHAQLGQGSSRSMQLLQELH----RTTSL 341
G L A LF + +KD V + ++I +AH + + +M L E+ T +
Sbjct: 281 KCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKE----AMALFSEMESIGLSTWNA 336
Query: 342 QIQG--------------------------ATLIAILKSCKNKSDLPAGRQIHSLVMKSS 375
I G TL ++L S S+L G++IH+ +++
Sbjct: 337 MISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG 396
Query: 376 VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS--SWSSIIGTYKQNGMESEALEL 433
+ V +++ Y++ G + A + F + CKD S +W++II Y +G A L
Sbjct: 397 ADNNIYVTTSIIDNYAKLGFLLGAQRVFDN--CKDRSLIAWTAIITAYAVHGDSDSACSL 454
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
+M C+ G D ++++ +A
Sbjct: 455 FDQM-------------QCL----------------------GTKPDDVTLTAVLSAFAH 479
Query: 494 CGHMEDSKKVFDA-----QVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQV 548
G + ++ +FD+ ++P Y M+ + G+ A+E + K + P
Sbjct: 480 SGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEF---ISKMPIDPIAK 536
Query: 549 TFLAMLSACSHAGYIE------DTLNLFTLMLYKYKIKPESE-HYSCLVDAYGRAGRLEE 601
+ A+L+ S G +E D L ++++PE+ +Y+ + + Y +AGR EE
Sbjct: 537 VWGALLNGASVLGDLEIARFACDRL---------FEMEPENTGNYTIMANLYTQAGRWEE 587
Query: 602 AYQIVQK 608
A + K
Sbjct: 588 AEMVRNK 594
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 45/362 (12%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRV-MDERPNEYTFSVLLRACATPALWNV 59
M R+VV+W ++IS + ++GS +++ M D +PN T + +AC +
Sbjct: 193 MSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
GL++H ++ + ++ D ++++ Y+ GS L A +F ++ E+D V + +ISG+
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGS-LDYARALFDEMSEKDSVTYGAIISGYM 311
Query: 120 QVGDFCMVQRLFSEM-------WE--VEGLKPDN------RTFVSLLKCCS-----TLGE 159
G LFSEM W + GL +N +F +++C S TL
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSS 371
Query: 160 VM-------------QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD 206
++ +IH A + GA+ + V+++++D YAK G + +++FD+ +++
Sbjct: 372 LLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS 431
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHG 266
W++II+ Y V+ + A F M KPD L++ L A D + +
Sbjct: 432 LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFD 491
Query: 267 QM-----IKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIV-AWNSMILAHAQ 320
M I+ G ++ + SVL + G L DA + ++ I W +++ +
Sbjct: 492 SMLTKYDIEPGVEHYACMVSVL----SRAGKLSDAMEFISKMPIDPIAKVWGALLNGASV 547
Query: 321 LG 322
LG
Sbjct: 548 LG 549
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/589 (29%), Positives = 294/589 (49%), Gaps = 56/589 (9%)
Query: 110 AWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGL 166
+W+ ++ A+ G V R E+ +G KPD V LL+ G V Q+HG
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELIN-DGEKPDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 167 ASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEA 226
+K G ++ +S++++ Y + K+FD M + D W+S++SGY + R +E
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 227 VHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG-HQNDCFVASVLLT 285
+ F ++ + V P++ ++ L AC + G +H +++K G + + V + L+
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 286 LYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG 345
+Y G + DA +F+ +++KD V+WN
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWN--------------------------------- 227
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHP-TLVGNALVHMYSECGQIGDAFKAFV 404
AI+ SC L G L + +P T+ N L+ + + G +AF+
Sbjct: 228 ----AIVASCSRNGKLELG-----LWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLS 278
Query: 405 DIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINV 464
D+ + SSW++I+ Y + EA E +M + G+ F YSL + +++ + L +
Sbjct: 279 DMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPW 338
Query: 465 GKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAH 524
G H A K G + V V S++IDMY+KCG ++ ++ +F + N +++N MI GYA
Sbjct: 339 GSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYAR 398
Query: 525 HGQAKQAIEIFTML-EKNGVTPNQVTFLAMLSACSHAGY-IEDTLNLFTLMLYKYKIKPE 582
+G + +AI++F L ++ + P++ TFL +L+ CSH +E L F +M+ +Y+IKP
Sbjct: 399 NGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPS 458
Query: 583 SEHYSCLVDAYGRAGRLEEAYQIVQKDG---SESAWRTLLSACRNHNNTKIGEKSAKKMI 639
EH L+ A G+ G + +A Q++Q+ G AWR LL AC + K + A KMI
Sbjct: 459 VEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMI 518
Query: 640 ELNPSDHAS--YILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
EL +D YI++SN+Y +W E R+ M ++GV K+ GSSW+
Sbjct: 519 ELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 168/356 (47%), Gaps = 40/356 (11%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP +V++W +L+S ++++G + LF ++ D PNE++F+ L ACA L +G
Sbjct: 116 MPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLG 175
Query: 61 LQIHGVLVRSGLER-DKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
IH LV+ GLE+ + G+ L+ MY G + DA VF + E+D V+WN +++ +
Sbjct: 176 ACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGF-MDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS 179
+ G + F +M D V
Sbjct: 235 RNGKLELGLWFFHQM-------------------------------------PNPDTVTY 257
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
+ ++D + K GD ++ ++ M ++ W++I++GY + + EA FF M V+
Sbjct: 258 NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVR 317
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
D++ LS L A + + G +H K G + VAS L+ +Y+ G L+ AE +
Sbjct: 318 FDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELM 377
Query: 300 FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
F + K+++ WN MI +A+ G S +++L +L + L+ T + +L C
Sbjct: 378 FWTMPRKNLIVWNEMISGYARNGD-SIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 207/471 (43%), Gaps = 62/471 (13%)
Query: 8 TWTTLISSHLRAGSV---PKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+W+T++ + R GS+ A +L ND E+P+ LLR ++ Q+H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELIND----GEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
G + + G + +SL+ Y + S L DA VF ++ + D+++WN ++SG+ Q G F
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDS-LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRF 137
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCC-----STLGEVMQIHGLASKFGAET-DAVV 178
LF E+ + + P+ +F + L C S LG IH K G E + VV
Sbjct: 138 QEGICLFLELHRSD-VFPNEFSFTAALAACARLHLSPLGAC--IHSKLVKLGLEKGNVVV 194
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
+ ++D+Y KCG + +F MEEKD W++I++ + N + E + FF M
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----P 250
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK 298
PD + + A V+ D N QV M
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDM------------------------------ 280
Query: 299 LFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
+ + +WN+++ + + S + + ++H ++ ++ +L +L +
Sbjct: 281 -----PNPNSSSWNTILTGYVN-SEKSGEATEFFTKMH-SSGVRFDEYSLSIVLAAVAAL 333
Query: 359 SDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII 418
+ +P G IH+ K + +V +AL+ MYS+CG + A F + K+ W+ +I
Sbjct: 334 AVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMI 393
Query: 419 GTYKQNGMESEALELCKEMLAEGI----TFTSYSLPLCISSCSQLLAINVG 465
Y +NG EA++L ++ E FT +L S C + + +G
Sbjct: 394 SGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLG 444
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 127/260 (48%), Gaps = 14/260 (5%)
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
+SWS+I+ + G L E++ +G + L + +++ +Q H +
Sbjct: 22 NSWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
K G+ + + +S++ Y +ED+ KVFD P+ + +N+++ GY G+ ++
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACS--HAGYIEDTLN--LFTLMLYKYKIKPESEHYS 587
I +F L ++ V PN+ +F A L+AC+ H + ++ L L L K + +
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG----N 196
Query: 588 CLVDAYGRAGRLEEAYQIVQ--KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSD 645
CL+D YG+ G +++A + Q ++ +W ++++C + ++G +M NP D
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP--NP-D 253
Query: 646 HASYILLSNIYIEEGKWEEA 665
+Y L + +++ G + A
Sbjct: 254 TVTYNELIDAFVKSGDFNNA 273
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/541 (29%), Positives = 276/541 (51%), Gaps = 56/541 (10%)
Query: 158 GEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGY 217
G V+ H + S T +++ +V Y +CG V RK+FD M ++D +I
Sbjct: 35 GRVLHAHLVTSGIARLTR--IAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGAC 92
Query: 218 TVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDC 277
N +E++ FF++M K +K D ++ S L+A + D G +H ++K +++D
Sbjct: 93 ARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDA 152
Query: 278 FVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHR 337
F+ S L+ +Y+ FG + +A K+F + ++D+V +N+MI +A Q
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQAD------------ 200
Query: 338 TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALV----HMYSEC 393
+ L+ +K K D+ + NAL+ HM +E
Sbjct: 201 ------EALNLVKDMKLLGIKPDV-------------------ITWNALISGFSHMRNE- 234
Query: 394 GQIGDAFKAFVDIVCKDD-----SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYS 448
+ ++++C D SW+SII N +A + K+ML G+ S +
Sbjct: 235 ----EKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
Query: 449 LPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQV 508
+ + +C+ L + GK+ H +++ +G +V S+++DMY KCG + ++ +F
Sbjct: 291 IITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Query: 509 KPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLN 568
K V +N+MI YA+HG A +A+E+F +E G + +TF A+L+ACSHAG + N
Sbjct: 351 KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQN 410
Query: 569 LFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNH 625
LF LM KY+I P EHY+C+VD GRAG+L EAY++++ E W LL+ACRNH
Sbjct: 411 LFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNH 470
Query: 626 NNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSW 685
N ++ +AK + EL P + + +LL+++Y G WE ++ + K ++ GSSW
Sbjct: 471 GNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSW 530
Query: 686 L 686
+
Sbjct: 531 V 531
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 227/494 (45%), Gaps = 48/494 (9%)
Query: 47 LLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER 106
L+ A L+ G +H LV SG+ R + LV Y G L DA VF ++ +R
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVL-DARKVFDEMPKR 80
Query: 107 DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQI 163
D+ VMI A+ G + F EM++ +GLK D SLLK L + I
Sbjct: 81 DISGCVVMIGACARNGYYQESLDFFREMYK-DGLKLDAFIVPSLLKASRNLLDREFGKMI 139
Query: 164 HGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRG 223
H L KF E+DA + S+++D+Y+K G+V + RK+F + E+D V++++ISGY N++
Sbjct: 140 HCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQA 199
Query: 224 EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL 283
+EA++ KDM +KPD ++ + + + ++ M +G++
Sbjct: 200 DEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYK--------- 250
Query: 284 LTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI 343
D+V+W S+I Q Q L T L
Sbjct: 251 ----------------------PDVVSWTSIISGLVHNFQNEKAFDAFKQML--THGLYP 286
Query: 344 QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF 403
AT+I +L +C + + G++IH + + + V +AL+ MY +CG I +A F
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 404 VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
K +++S+I Y +G+ +A+EL +M A G + +++CS +
Sbjct: 347 RKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
Query: 464 VGKQFHV-----FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVKPNEVIYNA 517
+G+ + + I H + ++D+ + G + ++ ++ A +++P+ ++ A
Sbjct: 407 LGQNLFLLMQNKYRIVPRLEHY----ACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGA 462
Query: 518 MICGYAHHGQAKQA 531
++ +HG + A
Sbjct: 463 LLAACRNHGNMELA 476
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 196/442 (44%), Gaps = 35/442 (7%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R++ +I + R G ++ F +M + + + LL+A G
Sbjct: 77 MPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFG 136
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
IH ++++ E D F SSL+ MYS G + +A VF DL E+DLV +N MISG+A
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFG-EVGNARKVFSDLGEQDLVVFNAMISGYAN 195
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
L +M ++ G+KPD V+ + L S F + S
Sbjct: 196 NSQADEALNLVKDM-KLLGIKPD----------------VITWNALISGFSHMRNEEKVS 238
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
+++L G + D W+SIISG N + E+A FK M + P
Sbjct: 239 EILELMCLDG------------YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYP 286
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
+ + + L AC + + G ++HG + G ++ FV S LL +Y G + +A LF
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
R+ K V +NSMI +A G + ++++L ++ T ++ T AIL +C +
Sbjct: 347 RKTPKKTTVTFNSMIFCYANHGL-ADKAVELFDQMEATGE-KLDHLTFTAILTACSHAGL 404
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAFVDIVCKDD-SSWSSII 418
G+ + L+ P L A +V + G++ +A++ + + D W +++
Sbjct: 405 TDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALL 464
Query: 419 GTYKQNGMESEALELCKEMLAE 440
+ +G E + + LAE
Sbjct: 465 AACRNHG-NMELARIAAKHLAE 485
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 249/463 (53%), Gaps = 9/463 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER-PNEYTFSVLLRACATPALWNV 59
MP +N VTWT +I +L+ G +AF LF D R NE F LL C+ A + +
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G Q+HG +V+ G+ + SSLVY Y+ G L A F + E+D+++W +IS +
Sbjct: 203 GRQVHGNMVKVGVG-NLIVESSLVYFYAQCG-ELTSALRAFDMMEEKDVISWTAVISACS 260
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETDA 176
+ G +F M P+ T S+LK CS L Q+H L K +TD
Sbjct: 261 RKGHGIKAIGMFIGMLN-HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDV 319
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V ++++D+YAKCG++S CRK+FD M ++ W+SII+ + GEEA+ F+ M ++
Sbjct: 320 FVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR 379
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+ + + S LRAC + L G ++H Q+IKN + + ++ S L+ LY G RDA
Sbjct: 380 HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA 439
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+ +++ +D+V+W +MI + LG S ++ L+E+ + ++ T + LK+C
Sbjct: 440 FNVLQQLPSRDVVSWTAMISGCSSLGH-ESEALDFLKEMIQE-GVEPNPFTYSSALKACA 497
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSS 416
N L GR IHS+ K+ VG+AL+HMY++CG + +AF+ F + K+ SW +
Sbjct: 498 NSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKA 557
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQL 459
+I Y +NG EAL+L M AEG Y +S+C +
Sbjct: 558 MIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 261/482 (54%), Gaps = 18/482 (3%)
Query: 90 GSNLRDACC----------VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEG 139
G+NL +C VF + E++ V W MI G+ + G LF E + G
Sbjct: 120 GNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALF-EDYVKHG 178
Query: 140 LKPDN-RTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSC 195
++ N R FV LL CS E Q+HG K G + +V S++V YA+CG+++S
Sbjct: 179 IRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSA 237
Query: 196 RKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEI 255
+ FD MEEKD W+++IS + G +A+ F M P++ + S L+AC E
Sbjct: 238 LRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEE 297
Query: 256 EDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI 315
+ L G QVH ++K + D FV + L+ +YA G + D K+F + +++ V W S+I
Sbjct: 298 KALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSII 357
Query: 316 LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS 375
AHA+ G G ++ L + + R L T+++IL++C + L G+++H+ ++K+S
Sbjct: 358 AAHAREGFGE-EAISLFRIMKRR-HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 415
Query: 376 VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCK 435
+ +G+ LV +Y +CG+ DAF + +D SW+++I G ESEAL+ K
Sbjct: 416 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 475
Query: 436 EMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCG 495
EM+ EG+ ++ + +C+ ++ +G+ H A K+ +V+VGS++I MYAKCG
Sbjct: 476 EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCG 535
Query: 496 HMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLS 555
+ ++ +VFD+ + N V + AMI GYA +G ++A+++ +E G + F +LS
Sbjct: 536 FVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILS 595
Query: 556 AC 557
C
Sbjct: 596 TC 597
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 225/449 (50%), Gaps = 9/449 (2%)
Query: 160 VMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTV 219
+ +IH +A K + + ++ + GD+ RK+FDSM EK+ W+++I GY
Sbjct: 101 IKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLK 160
Query: 220 NNRGEEAVHFFKDMCKQRVK-PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCF 278
+EA F+D K ++ ++ + L C + G QVHG M+K G N
Sbjct: 161 YGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN-LI 219
Query: 279 VASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT 338
V S L+ YA G L A + F +++KD+++W ++I A ++ G G + L+
Sbjct: 220 VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
T+ +ILK+C + L GRQ+HSLV+K + VG +L+ MY++CG+I D
Sbjct: 280 --FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
K F + ++ +W+SII + + G EA+ L + M + + ++ + +C
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 459 LLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAM 518
+ A+ +GK+ H IK+ +VY+GS+++ +Y KCG D+ V + V + AM
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 519 ICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYK 578
I G + G +A++ + + GV PN T+ + L AC+++ E L ++ K
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANS---ESLLIGRSIHSIAKK 514
Query: 579 IKPESEHY--SCLVDAYGRAGRLEEAYQI 605
S + S L+ Y + G + EA+++
Sbjct: 515 NHALSNVFVGSALIHMYAKCGFVSEAFRV 543
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 143/259 (55%), Gaps = 5/259 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M +RN VTWT++I++H R G +A LF M+ N T +LRAC + +G
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++H ++++ +E++ + GS+LV++Y G + RDA V L RD+V+W MISG +
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGES-RDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAV 177
+G EM + EG++P+ T+ S LK C+ ++ IH +A K A ++
Sbjct: 464 LGHESEALDFLKEMIQ-EGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVF 522
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V SA++ +YAKCG VS ++FDSM EK+ W ++I GY N EA+ M +
Sbjct: 523 VGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEG 582
Query: 238 VKPDQHVLSSTLRACVEIE 256
+ D ++ ++ L C +IE
Sbjct: 583 FEVDDYIFATILSTCGDIE 601
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 317/638 (49%), Gaps = 47/638 (7%)
Query: 80 SSLVYMYSNN------GSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSE 133
S LVY ++ NL A F ++ RD+V +N++ISG ++ G L++E
Sbjct: 43 SDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAE 102
Query: 134 MWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCG 190
M GL+ TF S+L CS E +Q+H G + V SA+V LYA
Sbjct: 103 MVSC-GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLR 161
Query: 191 DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLR 250
V K+FD M +++ V + ++ + + + M + V + +R
Sbjct: 162 LVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR 221
Query: 251 ACVEIEDLNTGVQVHGQMIKNG-HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIV 309
C + G Q+H ++K+G + ++ FVA+VL+ Y+ G L + + F + +KD++
Sbjct: 222 GCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVI 281
Query: 310 AWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA-----TLIAILKSCKNKSDLPAG 364
+WNS++ A G +L L + +Q G ++ L C SD+ +G
Sbjct: 282 SWNSIVSVCADYGS-------VLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG 334
Query: 365 RQIHSLVMKSSVSHPTL-VGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQ 423
+QIH V+K +L V +AL+ MY +C I ++ + + C + +S++ +
Sbjct: 335 KQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMH 394
Query: 424 NGMESEALELCKEMLAEG-----ITFT------SYSLPLCISSCSQLLAINVGKQFHVFA 472
G+ + +E+ M+ EG +T + S SLP + SC+ + H A
Sbjct: 395 CGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLV---------HCCA 445
Query: 473 IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAI 532
IKSGY DV V S+ID Y K G E S+KVFD PN ++I GYA +G +
Sbjct: 446 IKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCV 505
Query: 533 EIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA 592
++ +++ + P++VT L++LS CSH+G +E+ +F + KY I P + Y+C+VD
Sbjct: 506 KMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDL 565
Query: 593 YGRAGRLEEAYQIV---QKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASY 649
GRAG +E+A +++ + D AW +LL +CR H N IG ++A+ ++ L P + A Y
Sbjct: 566 LGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVY 625
Query: 650 ILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWLI 687
I +S Y E G +E +R RE A + ++ G S ++
Sbjct: 626 IQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVV 663
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 247/518 (47%), Gaps = 24/518 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R+VVT+ LIS + R G +A +L+ +M R + TF +L C+ G
Sbjct: 72 MSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREG 131
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRD-ACCVFHDLLERDLVAWNVMISGFA 119
+Q+H ++ G + F S+LV +Y+ L D A +F ++L+R+L N+++ F
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYA--CLRLVDVALKLFDEMLDRNLAVCNLLLRCFC 189
Query: 120 QVGDFCMVQRLFSEMW---EVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAE 173
Q G+ +RLF E++ E+EG+ + T+ +++ CS + E Q+H L K G
Sbjct: 190 QTGE---SKRLF-EVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWN 245
Query: 174 -TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKD 232
++ V++ +VD Y+ CGD+S + F+++ EKD W+SI+S +++ F
Sbjct: 246 ISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSK 305
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ-NDCFVASVLLTLYANFG 291
M +P S L C D+ +G Q+H ++K G + V S L+ +Y
Sbjct: 306 MQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCN 365
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMI--LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLI 349
G+ ++ L++ + ++ NS++ L H G ++ + + L I TL
Sbjct: 366 GIENSALLYQSLPCLNLECCNSLMTSLMHC----GITKDIIEMFGLMIDEGTGIDEVTLS 421
Query: 350 AILK--SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV 407
+LK S L + +H +KS + V +L+ Y++ GQ + K F ++
Sbjct: 422 TVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELD 481
Query: 408 CKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ 467
+ +SII Y +NGM ++ +++ +EM + ++ +S CS + G+
Sbjct: 482 TPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGEL 541
Query: 468 -FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
F K G + + + ++D+ + G +E ++++
Sbjct: 542 IFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLL 579
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 200/427 (46%), Gaps = 13/427 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M RN+ L+ + G + F+++ M + N T+ ++R C+ L G
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 61 LQIHGVLVRSGLE-RDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
Q+H ++V+SG + F + LV YS G +L + F+ + E+D+++WN ++S A
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACG-DLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDA 176
G LFS+M + G +P R F+S L CS ++ QIH K G + +
Sbjct: 292 DYGSVLDSLDLFSKM-QFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 177 V-VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
+ V SA++D+Y KC + + ++ S+ + +S+++ ++ + F M
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 236 QRVKPDQHVLSSTLRA--CVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
+ D+ LS+ L+A E L++ VH IK+G+ D V+ L+ Y G
Sbjct: 411 EGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQN 470
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
+ K+F +D +I S+I +A+ G G+ +++L+E+ R +L T++++L
Sbjct: 471 EVSRKVFDELDTPNIFCLTSIINGYARNGMGTD-CVKMLREMDR-MNLIPDEVTILSVLS 528
Query: 354 SCKNKSDLPAGRQIH-SLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS 412
C + + G I SL K +S + +V + G + A + + D
Sbjct: 529 GCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADC 588
Query: 413 -SWSSII 418
+WSS++
Sbjct: 589 VAWSSLL 595
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 140/306 (45%), Gaps = 15/306 (4%)
Query: 327 RSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNAL 386
R Q L L RTT+L +L + + R S ++ + S N
Sbjct: 2 RGAQALYFLRRTTTLAQHLCSLTPFIAT---------PRMDFSSFLEENPSDLVYTHNRR 52
Query: 387 VHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTS 446
+ + G + A +AF ++ +D +++ +I + G A+EL EM++ G+ ++
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 447 YSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA 506
+ P +S CS L G Q H I G+ +++V S+++ +YA ++ + K+FD
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 507 QVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDT 566
+ N + N ++ + G++K+ E++ +E GV N +T+ M+ CSH + +
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 567 LNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQ----IVQKDGSESAWRTLLSAC 622
L +L++ + LVD Y G L + + + +KD +W +++S C
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKD--VISWNSIVSVC 290
Query: 623 RNHNNT 628
++ +
Sbjct: 291 ADYGSV 296
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 182/621 (29%), Positives = 306/621 (49%), Gaps = 51/621 (8%)
Query: 93 LRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK 152
+ +A +F L R+ V WN MISG+ + + ++LF M K D T+ +++
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM-----PKRDVVTWNTMIS 110
Query: 153 CCSTLGEVMQIHGLASKFG--AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
+ G + + F D+ + M+ YAK + +F+ M E++ W
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQM-- 268
S++I+G+ N + AV F+ M + P L + + ++ E L+ V GQ
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 269 IKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD---------------KDIVAWNS 313
+ +G ++ + + L+ Y G + A LF +I D K++V+WNS
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 314 MILAHAQLGQGSSRSMQLLQELHRTT---SLQIQGATLIAILKSCKNK-SDLPAGRQIHS 369
MI A+ ++G S + Q R T + I G ++ ++ S++P R HS
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMP-NRDAHS 345
Query: 370 LVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESE 429
N +V Y+ G + A F K SW+SII Y++N E
Sbjct: 346 W-------------NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKE 392
Query: 430 ALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIID 489
A++L M EG ++L +S+ + L+ + +G Q H +K+ DV V +++I
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALIT 451
Query: 490 MYAKCGHMEDSKKVFDAQVKPNEVI-YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQV 548
MY++CG + +S+++FD EVI +NAMI GYA HG A +A+ +F ++ NG+ P+ +
Sbjct: 452 MYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHI 511
Query: 549 TFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
TF+++L+AC+HAG +++ F M+ YKI+P+ EHYS LV+ G+ EEA I+
Sbjct: 512 TFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITS 571
Query: 609 ---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEA 665
+ ++ W LL ACR +NN + +A+ M L P Y+LL N+Y + G W+EA
Sbjct: 572 MPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEA 631
Query: 666 RDCREKMAKTGVKKDPGSSWL 686
R M +KK+ GSSW+
Sbjct: 632 SQVRMNMESKRIKKERGSSWV 652
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 147/609 (24%), Positives = 261/609 (42%), Gaps = 155/609 (25%)
Query: 1 MPHRNVVTWTTLISSHLRAGSV---PKAFQLFNDMRVMDERPNEYTFSVLLRACATPALW 57
MP R+VVTW T+IS ++ G + +A +LF DE P+ +FS W
Sbjct: 97 MPKRDVVTWNTMISGYVSCGGIRFLEEARKLF------DEMPSRDSFS-----------W 139
Query: 58 NVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISG 117
N + SG +++ G +L+ +F + ER+ V+W+ MI+G
Sbjct: 140 NTMI--------SGYAKNRRIGEALL---------------LFEKMPERNAVSWSAMITG 176
Query: 118 FAQVGDFCMVQRLFSEM---------WEVEGLKPDNR------------TFVS----LLK 152
F Q G+ LF +M V GL + R + VS L+
Sbjct: 177 FCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVY 236
Query: 153 CCSTL----GEVMQIHGLASKF-----------GAE------TDAVVSSAMVDLYAKCGD 191
+TL G+ Q+ F G E + V ++M+ Y K GD
Sbjct: 237 AYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGD 296
Query: 192 VSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRA 251
V S R +FD M+++D W+++I GY +R E+A F +M P++
Sbjct: 297 VVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PNR--------- 341
Query: 252 CVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAW 311
D +++++ YA+ G + A F + +K V+W
Sbjct: 342 ------------------------DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSW 377
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA-----TLIAILKSCKNKSDLPAGRQ 366
NS+I A+ ++ + + + I+G TL ++L + +L G Q
Sbjct: 378 NSIIAAY-------EKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ 430
Query: 367 IHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS-SWSSIIGTYKQNG 425
+H +V+K+ + V NAL+ MYS CG+I ++ + F ++ K + +W+++IG Y +G
Sbjct: 431 MHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489
Query: 426 MESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK-QF----HVFAIKSGYNHD 480
SEAL L M + GI + + +++C+ ++ K QF V+ I+ H
Sbjct: 490 NASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEH- 548
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICG---YAHHGQAKQAIEIFT 536
SS++++ + G E++ + + +P++ ++ A++ Y + G A A E +
Sbjct: 549 ---YSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMS 605
Query: 537 MLEKNGVTP 545
LE TP
Sbjct: 606 RLEPESSTP 614
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 194/435 (44%), Gaps = 38/435 (8%)
Query: 188 KCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSS 247
+ G ++ R IF+ +E ++ W+++ISGY +A F M K+ V ++S
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 248 TLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKD 307
+ +C I L ++ +M D F + +++ YA + +A LF ++ +++
Sbjct: 112 YV-SCGGIRFLEEARKLFDEM----PSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 308 IVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI 367
V+W++MI Q G+ S ++ L +++ S + A + ++K+ + Q
Sbjct: 167 AVSWSAMITGFCQNGEVDS-AVVLFRKMPVKDSSPL-CALVAGLIKNERLSEAAWVLGQY 224
Query: 368 HSLVMKSSVSHPTLVGNALVHMYSECGQIGDA---FKAFVDI------------VCKDDS 412
SLV S N L+ Y + GQ+ A F D+ CK+
Sbjct: 225 GSLV--SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLA-INVGKQFHVF 471
SW+S+I Y + G ++++ + F IS + + ++V + F
Sbjct: 283 SWNSMIKAYLKVG----------DVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAF 332
Query: 472 AIKSGY-NHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQ 530
A+ S N D + + ++ YA G++E ++ F+ + + V +N++I Y + K+
Sbjct: 333 ALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKE 392
Query: 531 AIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLV 590
A+++F + G P+ T ++LSA + G + L + + + P+ ++ L+
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIVVKTVIPDVPVHNALI 450
Query: 591 DAYGRAGRLEEAYQI 605
Y R G + E+ +I
Sbjct: 451 TMYSRCGEIMESRRI 465
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 170/578 (29%), Positives = 291/578 (50%), Gaps = 51/578 (8%)
Query: 149 SLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
SLL C E + Q+H G E D+V+ +V Y+ + + I ++ E
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
W+ +I Y N R +E+V +K M + ++ D+ S ++AC + D G VH
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 266 GQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI---LAHAQLG 322
G + + H+ + +V + L+++Y FG + A +LF R+ ++D V+WN++I + +LG
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 323 QGSSRSMQLLQELH----------------------------------RTTSLQIQGATL 348
+ + +LL ++ R +++I +
Sbjct: 268 E----AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKS-SVSHPT-LVGNALVHMYSECGQIGDAFKAFVDI 406
I LK+C + L G+ H LV++S S SH V N+L+ MYS C + AF F +
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 407 VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK 466
S+W+SII + N E L KEML G +L + +++ + GK
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 467 QFHVFAIK-SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHH 525
+FH + ++ Y + + +S++DMYAK G + +K+VFD+ K ++V Y ++I GY
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 526 GQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEH 585
G+ + A+ F ++++G+ P+ VT +A+LSACSH+ + + LFT M + + I+ EH
Sbjct: 504 GKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH 563
Query: 586 YSCLVDAYGRAGRLEEA---YQIVQKDGSESAWRTLLSACRNHNNTKIGEKSAKK-MIEL 641
YSC+VD Y RAG L++A + + + S + TLL AC H NT IGE +A K ++E
Sbjct: 564 YSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLET 623
Query: 642 NPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKK 679
P Y+LL+++Y G W + + ++ GV+K
Sbjct: 624 KPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 131/541 (24%), Positives = 233/541 (43%), Gaps = 72/541 (13%)
Query: 20 GSVPKAFQLFNDMRVMDERPN--EYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKF 77
G + +AF+ F+ +R Y+ + LL C + G Q+H + SGLE D
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 78 AGSSLVYMYS-----NNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFS 132
LV YS + + + + H L WNV+I + + F ++
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPL------PWNVLIGSYIRNKRFQESVSVYK 173
Query: 133 EMWEVEGLKPDNRTFVSLLKCCSTL-----GEVMQIHGLASKFGAETDAVVSSAMVDLYA 187
M +G++ D T+ S++K C+ L G V +HG + V +A++ +Y
Sbjct: 174 RMMS-KGIRADEFTYPSVIKACAALLDFAYGRV--VHGSIEVSSHRCNLYVCNALISMYK 230
Query: 188 KCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM-------------- 233
+ G V R++FD M E+D W++II+ YT + EA M
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT 290
Query: 234 ----CKQ-----------------RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN- 271
C + V+ + + L+AC I L G H +I++
Sbjct: 291 IAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSC 350
Query: 272 --GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM 329
H D V + L+T+Y+ LR A +F++++ + WNS+I A + S +
Sbjct: 351 SFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA-YNERSEETS 408
Query: 330 QLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVM-KSSVSHPTLVGNALVH 388
LL+E+ + TL +IL +L G++ H ++ + S ++ N+LV
Sbjct: 409 FLLKEM-LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVD 467
Query: 389 MYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYS 448
MY++ G+I A + F + +D +++S+I Y + G AL K+M GI +
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVT 527
Query: 449 LPLCISSCSQLLAINVG-----KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
+ +S+CS + G K HVF I+ H S ++D+Y + G+++ ++ +
Sbjct: 528 MVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH----YSCMVDLYCRAGYLDKARDI 583
Query: 504 F 504
F
Sbjct: 584 F 584
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 197/454 (43%), Gaps = 56/454 (12%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGV 66
+ W LI S++R ++ ++ M R +E+T+ +++ACA + G +HG
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCM 126
+ S + + ++L+ MY G + A +F + ERD V+WN +I+ +
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFG-KVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 127 VQRLFSEMWEVEGLKPDNRTF--------------------VSLLKCCSTLGEVMQIHGL 166
+L M+ + G++ T+ V + C +G V I+GL
Sbjct: 269 AFKLLDRMY-LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 167 AS---------------------KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
+ F + D V +S ++ +Y++C D+ +F +E
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS-LITMYSRCSDLRHAFIVFQQVEAN 386
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
W+SIISG+ N R EE K+M P+ L+S L + +L G + H
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 266 GQMIKNGHQNDCFVA-SVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
+++ DC + + L+ +YA G + A+++F + +D V + S+I + +LG+G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI-----HSLVMKSSVSHP 379
++ +++ R + ++ T++A+L +C + + + G + H ++ + H
Sbjct: 507 EV-ALAWFKDMDR-SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 380 TLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
+ +V +Y G + A F I + S+
Sbjct: 565 S----CMVDLYCRAGYLDKARDIFHTIPYEPSSA 594
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 214/504 (42%), Gaps = 90/504 (17%)
Query: 246 SSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD 305
+S L CV + G Q+H I +G + D + L+T Y+ F L +A+ + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 306 KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA--TLIAILKSCKNKSDLPA 363
+ WN +I ++ + + R + + R S I+ T +++K+C D
Sbjct: 147 LHPLPWNVLIGSYIR----NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAY 202
Query: 364 GRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQ 423
GR +H + SS V NAL+ MY G++ A + F + +D SW++II Y
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 424 NGMESEALELCKEMLAEGITFT-----------------------------------SYS 448
EA +L M G+ + S +
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVA 322
Query: 449 LPLCISSCSQLLAINVGKQFHVFAIKS-GYNHDV-YVGSSIIDMYAKCGHMEDSKKVFDA 506
+ + +CS + A+ GK FH I+S ++HD+ V +S+I MY++C + + VF
Sbjct: 323 MINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQ- 381
Query: 507 QVKPNEV-IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG---- 561
QV+ N + +N++I G+A++ ++++ + + +G PN +T ++L + G
Sbjct: 382 QVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 562 ------YI------EDTLNLFTLMLYKYKI---------------KPESEHYSCLVDAYG 594
YI +D L L+ ++ Y K + Y+ L+D YG
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 595 RAGRLEEA---YQIVQKDGSESAWRTL---LSACRNHNNTKIGEKSAKKM-----IELNP 643
R G+ E A ++ + + G + T+ LSAC + N + G KM I L
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 644 SDHASYILLSNIYIEEGKWEEARD 667
++ + ++Y G ++ARD
Sbjct: 562 EHYSCMV---DLYCRAGYLDKARD 582
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 19/275 (6%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++VTW T+ L AG+ A MR + R L+AC+ G H
Sbjct: 284 SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFH 343
Query: 65 GVLVRS-GLERD-KFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
+++RS D +SL+ MYS S+LR A VF + L WN +ISGFA
Sbjct: 344 CLVIRSCSFSHDIDNVRNSLITMYS-RCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVS 179
L EM + G P++ T S+L + +G + + H + + D ++
Sbjct: 403 RSEETSFLLKEML-LSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 180 -SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
+++VD+YAK G++ + +++FDSM ++D ++S+I GY +GE A+ +FKDM + +
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGI 521
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH 273
KPD + + L AC H +++ GH
Sbjct: 522 KPDHVTMVAVLSAC-----------SHSNLVREGH 545
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 170/578 (29%), Positives = 291/578 (50%), Gaps = 51/578 (8%)
Query: 149 SLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
SLL C E + Q+H G E D+V+ +V Y+ + + I ++ E
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
W+ +I Y N R +E+V +K M + ++ D+ S ++AC + D G VH
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 266 GQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI---LAHAQLG 322
G + + H+ + +V + L+++Y FG + A +LF R+ ++D V+WN++I + +LG
Sbjct: 208 GSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 323 QGSSRSMQLLQELH----------------------------------RTTSLQIQGATL 348
+ + +LL ++ R +++I +
Sbjct: 268 E----AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKS-SVSHPT-LVGNALVHMYSECGQIGDAFKAFVDI 406
I LK+C + L G+ H LV++S S SH V N+L+ MYS C + AF F +
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 407 VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK 466
S+W+SII + N E L KEML G +L + +++ + GK
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 467 QFHVFAIK-SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHH 525
+FH + ++ Y + + +S++DMYAK G + +K+VFD+ K ++V Y ++I GY
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 526 GQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEH 585
G+ + A+ F ++++G+ P+ VT +A+LSACSH+ + + LFT M + + I+ EH
Sbjct: 504 GKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH 563
Query: 586 YSCLVDAYGRAGRLEEA---YQIVQKDGSESAWRTLLSACRNHNNTKIGEKSAKK-MIEL 641
YSC+VD Y RAG L++A + + + S + TLL AC H NT IGE +A K ++E
Sbjct: 564 YSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLET 623
Query: 642 NPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKK 679
P Y+LL+++Y G W + + ++ GV+K
Sbjct: 624 KPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 131/541 (24%), Positives = 233/541 (43%), Gaps = 72/541 (13%)
Query: 20 GSVPKAFQLFNDMRVMDERPN--EYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKF 77
G + +AF+ F+ +R Y+ + LL C + G Q+H + SGLE D
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 78 AGSSLVYMYS-----NNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFS 132
LV YS + + + + H L WNV+I + + F ++
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPL------PWNVLIGSYIRNKRFQESVSVYK 173
Query: 133 EMWEVEGLKPDNRTFVSLLKCCSTL-----GEVMQIHGLASKFGAETDAVVSSAMVDLYA 187
M +G++ D T+ S++K C+ L G V +HG + V +A++ +Y
Sbjct: 174 RMMS-KGIRADEFTYPSVIKACAALLDFAYGRV--VHGSIEVSSHRCNLYVCNALISMYK 230
Query: 188 KCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM-------------- 233
+ G V R++FD M E+D W++II+ YT + EA M
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT 290
Query: 234 ----CKQ-----------------RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN- 271
C + V+ + + L+AC I L G H +I++
Sbjct: 291 IAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSC 350
Query: 272 --GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM 329
H D V + L+T+Y+ LR A +F++++ + WNS+I A + S +
Sbjct: 351 SFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA-YNERSEETS 408
Query: 330 QLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVM-KSSVSHPTLVGNALVH 388
LL+E+ + TL +IL +L G++ H ++ + S ++ N+LV
Sbjct: 409 FLLKEM-LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVD 467
Query: 389 MYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYS 448
MY++ G+I A + F + +D +++S+I Y + G AL K+M GI +
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVT 527
Query: 449 LPLCISSCSQLLAINVG-----KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
+ +S+CS + G K HVF I+ H S ++D+Y + G+++ ++ +
Sbjct: 528 MVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH----YSCMVDLYCRAGYLDKARDI 583
Query: 504 F 504
F
Sbjct: 584 F 584
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 197/454 (43%), Gaps = 56/454 (12%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGV 66
+ W LI S++R ++ ++ M R +E+T+ +++ACA + G +HG
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCM 126
+ S + + ++L+ MY G + A +F + ERD V+WN +I+ +
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFG-KVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 127 VQRLFSEMWEVEGLKPDNRTF--------------------VSLLKCCSTLGEVMQIHGL 166
+L M+ + G++ T+ V + C +G V I+GL
Sbjct: 269 AFKLLDRMY-LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 167 AS---------------------KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
+ F + D V +S ++ +Y++C D+ +F +E
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS-LITMYSRCSDLRHAFIVFQQVEAN 386
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
W+SIISG+ N R EE K+M P+ L+S L + +L G + H
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 266 GQMIKNGHQNDCFVA-SVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
+++ DC + + L+ +YA G + A+++F + +D V + S+I + +LG+G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI-----HSLVMKSSVSHP 379
++ +++ R + ++ T++A+L +C + + + G + H ++ + H
Sbjct: 507 EV-ALAWFKDMDR-SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 380 TLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
+ +V +Y G + A F I + S+
Sbjct: 565 S----CMVDLYCRAGYLDKARDIFHTIPYEPSSA 594
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 214/504 (42%), Gaps = 90/504 (17%)
Query: 246 SSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD 305
+S L CV + G Q+H I +G + D + L+T Y+ F L +A+ + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 306 KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA--TLIAILKSCKNKSDLPA 363
+ WN +I ++ + + R + + R S I+ T +++K+C D
Sbjct: 147 LHPLPWNVLIGSYIR----NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAY 202
Query: 364 GRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQ 423
GR +H + SS V NAL+ MY G++ A + F + +D SW++II Y
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 424 NGMESEALELCKEMLAEGITFT-----------------------------------SYS 448
EA +L M G+ + S +
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVA 322
Query: 449 LPLCISSCSQLLAINVGKQFHVFAIKS-GYNHDV-YVGSSIIDMYAKCGHMEDSKKVFDA 506
+ + +CS + A+ GK FH I+S ++HD+ V +S+I MY++C + + VF
Sbjct: 323 MINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQ- 381
Query: 507 QVKPNEV-IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG---- 561
QV+ N + +N++I G+A++ ++++ + + +G PN +T ++L + G
Sbjct: 382 QVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 562 ------YI------EDTLNLFTLMLYKYKI---------------KPESEHYSCLVDAYG 594
YI +D L L+ ++ Y K + Y+ L+D YG
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 595 RAGRLEEA---YQIVQKDGSESAWRTL---LSACRNHNNTKIGEKSAKKM-----IELNP 643
R G+ E A ++ + + G + T+ LSAC + N + G KM I L
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 644 SDHASYILLSNIYIEEGKWEEARD 667
++ + ++Y G ++ARD
Sbjct: 562 EHYSCMV---DLYCRAGYLDKARD 582
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 19/275 (6%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++VTW T+ L AG+ A MR + R L+AC+ G H
Sbjct: 284 SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFH 343
Query: 65 GVLVRS-GLERD-KFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
+++RS D +SL+ MYS S+LR A VF + L WN +ISGFA
Sbjct: 344 CLVIRSCSFSHDIDNVRNSLITMYS-RCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVS 179
L EM + G P++ T S+L + +G + + H + + D ++
Sbjct: 403 RSEETSFLLKEML-LSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 180 -SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
+++VD+YAK G++ + +++FDSM ++D ++S+I GY +GE A+ +FKDM + +
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGI 521
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH 273
KPD + + L AC H +++ GH
Sbjct: 522 KPDHVTMVAVLSAC-----------SHSNLVREGH 545
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 190/690 (27%), Positives = 327/690 (47%), Gaps = 51/690 (7%)
Query: 44 FSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL 103
F LLR A V +H ++ E+ + G++L+ Y G R+A VF L
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRL-GNALISTYLKLGFP-REAILVFVSL 140
Query: 104 LERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV--- 160
+V++ +ISGF+++ ++F M + ++P+ TFV++L C +
Sbjct: 141 SSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
Query: 161 MQIHGLASKFGAETDAVVSSAMVDLYAK-----CGDVSSCRKIFDSMEEKDNFVWSSIIS 215
+QIHGL K G VS++++ LY K C DV K+FD + ++D W++++S
Sbjct: 201 IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV---LKLFDEIPQRDVASWNTVVS 257
Query: 216 GYTVNNRGEEAVHFFKDMCK-QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ 274
+ +A F +M + + D LS+ L +C + L G ++HG+ I+ G
Sbjct: 258 SLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLM 317
Query: 275 NDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ----------- 323
+ V + L+ Y+ F ++ E L+ + +D V + MI A+ G
Sbjct: 318 QELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV 377
Query: 324 -------------GSSRSMQLLQELHRTTSLQIQGA-----TLIAILKSCKNKSDLPAGR 365
G R+ L+ L T + +G +L + + +C S+
Sbjct: 378 TEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSE 437
Query: 366 QIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS--WSSIIGTYKQ 423
QIH +K + + AL+ M + C ++ DA + F DSS +SIIG Y +
Sbjct: 438 QIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYAR 497
Query: 424 NGMESEALELCKEMLAEGITFT-SYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVY 482
NG+ +A+ L L E F SL L ++ C L +G Q H +A+K+GY D+
Sbjct: 498 NGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDIS 557
Query: 483 VGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG 542
+G+S+I MYAKC +D+ K+F+ + + + +N++I Y +A+ +++ + +
Sbjct: 558 LGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKE 617
Query: 543 VTPNQVTFLAMLSAC--SHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLE 600
+ P+ +T ++SA + + + +LF M Y I+P +EHY+ V G G LE
Sbjct: 618 IKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLE 677
Query: 601 EAYQIVQKDGSE---SAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYI 657
EA + + S R LL +CR H+NT + ++ AK ++ P + YIL SNIY
Sbjct: 678 EAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYS 737
Query: 658 EEGKWEEARDCREKMAKTGVKKDPGSSWLI 687
G W + RE+M + G +K P SW+I
Sbjct: 738 ASGFWHRSEMIREEMRERGYRKHPAKSWII 767
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 231/493 (46%), Gaps = 47/493 (9%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMD-ERPNEYTFSVLLRACATPALWNVGLQI 63
VV++T LIS R +A ++F MR +PNEYTF +L AC + +++G+QI
Sbjct: 144 TVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQI 203
Query: 64 HGVLVRSGLERDKFAGSSLVYMY-SNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
HG++V+SG F +SL+ +Y ++GS+ D +F ++ +RD+ +WN ++S + G
Sbjct: 204 HGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEG 263
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFG-------- 171
LF EM VEG D+ T +LL C S L ++HG A + G
Sbjct: 264 KSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVN 323
Query: 172 -----------------------AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNF 208
DAV + M+ Y G V S +IF ++ EK+
Sbjct: 324 NALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTI 383
Query: 209 VWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQM 268
++++++G+ N G +A+ F DM ++ V+ L+S + AC + + Q+HG
Sbjct: 384 TYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFC 443
Query: 269 IKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRR----IDDKDIVAWNSMILAHAQLGQG 324
IK G + + + LL + + DAE++F + +D A S+I +A+ G
Sbjct: 444 IKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSK--ATTSIIGGYARNGL- 500
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
+++ L L + +L IL C G QIH +K+ +GN
Sbjct: 501 PDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGN 560
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTY--KQNGMESEALELCKEMLAEGI 442
+L+ MY++C DA K F + D SW+S+I Y ++NG EAL L M + I
Sbjct: 561 SLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNG--DEALALWSRMNEKEI 618
Query: 443 TFTSYSLPLCISS 455
+L L IS+
Sbjct: 619 KPDIITLTLVISA 631
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 172/352 (48%), Gaps = 38/352 (10%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNV 59
+P R+V +W T++SS ++ G KAF LF +M RV + +T S LL +C ++
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLR 303
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSN------------------------------N 89
G ++HG +R GL ++ ++L+ YS +
Sbjct: 304 GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMS 363
Query: 90 GSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVS 149
+ A +F ++ E++ + +N +++GF + G +LF++M + G++ + + S
Sbjct: 364 FGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQ-RGVELTDFSLTS 422
Query: 150 LLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK- 205
+ C + E QIHG KFG + + +A++D+ +C ++ ++FD
Sbjct: 423 AVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 206 -DNFVWSSIISGYTVNNRGEEAVHFF-KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
+ +SII GY N ++AV F + +C+Q++ D+ L+ L C + G Q
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI 315
+H +K G+ +D + + L+++YA DA K+F + + D+++WNS+I
Sbjct: 543 IHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLI 594
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 8/254 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
+N +T+ L++ R G KA +LF DM +++ + + AC + V QI
Sbjct: 380 KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQI 439
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDL---VAWNVMISGFAQ 120
HG ++ G + ++L+ M + DA +F D +L A +I G+A+
Sbjct: 440 HGFCIKFGTAFNPCIQTALLDM-CTRCERMADAEEMF-DQWPSNLDSSKATTSIIGGYAR 497
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG--EV-MQIHGLASKFGAETDAV 177
G LF + L D + +L C TLG E+ QIH A K G +D
Sbjct: 498 NGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDIS 557
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
+ ++++ +YAKC D KIF++M E D W+S+IS Y + G+EA+ + M ++
Sbjct: 558 LGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKE 617
Query: 238 VKPDQHVLSSTLRA 251
+KPD L+ + A
Sbjct: 618 IKPDIITLTLVISA 631
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 248/460 (53%), Gaps = 11/460 (2%)
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
Q P Q + C L+ ++VH ++ NG D F+A+ L+ +Y++ G +
Sbjct: 71 QESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDY 130
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A K+F + + I WN++ A G G + L +++R ++ T +LK+C
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEE-VLGLYWKMNRI-GVESDRFTYTYVLKAC 188
Query: 356 KNK----SDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
+ L G++IH+ + + S + LV MY+ G + A F + ++
Sbjct: 189 VASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNV 248
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC--ISSCSQLLAINVGKQFH 469
SWS++I Y +NG EAL +EM+ E + S+ + + +C+ L A+ GK H
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308
Query: 470 VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAK 529
+ ++ G + + V S+++ MY +CG +E ++VFD + V +N++I Y HG K
Sbjct: 309 GYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGK 368
Query: 530 QAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCL 589
+AI+IF + NG +P VTF+++L ACSH G +E+ LF M + IKP+ EHY+C+
Sbjct: 369 KAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428
Query: 590 VDAYGRAGRLEEAYQIVQKDGSESA---WRTLLSACRNHNNTKIGEKSAKKMIELNPSDH 646
VD GRA RL+EA ++VQ +E W +LL +CR H N ++ E++++++ L P +
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNA 488
Query: 647 ASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+Y+LL++IY E W+E + ++ + G++K PG W+
Sbjct: 489 GNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWM 528
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 207/414 (50%), Gaps = 13/414 (3%)
Query: 142 PDNRTFVSLLKCC---STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKI 198
P +T+ L+ CC S+L + +++H G++ D +++ ++ +Y+ G V RK+
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 199 FDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACV----E 254
FD ++ +VW+++ T+ GEE + + M + V+ D+ + L+ACV
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSM 314
+ L G ++H + + G+ + ++ + L+ +YA FG + A +F + +++V+W++M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 315 ILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS 374
I +A+ G+ + + T T++++L++C + + L G+ IH +++
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELC 434
+ V +ALV MY CG++ + F + +D SW+S+I +Y +G +A+++
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSGYNHDVYVGSSIIDMYAK 493
+EMLA G + T + + +CS + GK+ F G + + ++D+ +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 494 CGHMEDSKK-VFDAQVKPNEVIYNAMICGYAHHGQAKQA----IEIFTMLEKNG 542
++++ K V D + +P ++ +++ HG + A +F + KN
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNA 488
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 212/425 (49%), Gaps = 19/425 (4%)
Query: 12 LISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSG 71
LI S + G + +A ++ + + P++ T+ +L+ C + + L++H ++ +G
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 72 LERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLF 131
++D F + L+ MYS+ GS + A VF +R + WN + G V L+
Sbjct: 108 SDQDPFLATKLIGMYSDLGS-VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 132 SEMWEVEGLKPDNRTFVSLLKCC----STLGEVM---QIHGLASKFGAETDAVVSSAMVD 184
+M + G++ D T+ +LK C T+ +M +IH ++ G + + + +VD
Sbjct: 167 WKMNRI-GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 185 LYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR--VKPDQ 242
+YA+ G V +F M ++ WS++I+ Y N + EA+ F++M ++ P+
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 243 HVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRR 302
+ S L+AC + L G +HG +++ G + V S L+T+Y G L +++F R
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 303 IDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLP 362
+ D+D+V+WNS+I ++ G G +++Q+ +E+ T +++L +C ++ +
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYG-KKAIQIFEEM-LANGASPTPVTFVSVLGACSHEGLVE 403
Query: 363 AGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSIIGT 420
G+++ + + P + A +V + ++ +A K D+ + W S++G+
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 421 YKQNG 425
+ +G
Sbjct: 464 CRIHG 468
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 9/257 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRAC-ATPALWN---V 59
R + W L + AG + L+ M + + +T++ +L+AC A+ N
Sbjct: 141 RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMK 200
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G +IH L R G + ++LV MY+ G + A VF + R++V+W+ MI+ +A
Sbjct: 201 GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC-VDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 120 QVGDFCMVQRLFSEMW-EVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETD 175
+ G R F EM E + P++ T VS+L+ C++L + Q IHG + G ++
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
V SA+V +Y +CG + +++FD M ++D W+S+IS Y V+ G++A+ F++M
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 236 QRVKPDQHVLSSTLRAC 252
P S L AC
Sbjct: 380 NGASPTPVTFVSVLGAC 396
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 108/233 (46%), Gaps = 9/233 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM--RVMDERPNEYTFSVLLRACATPALWN 58
MP RNVV+W+ +I+ + + G +A + F +M D PN T +L+ACA+ A
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
G IHG ++R GL+ S+LV MY G L VF + +RD+V+WN +IS +
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCG-KLEVGQRVFDRMHDRDVVSWNSLISSY 361
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAET 174
G ++F EM G P TFVS+L CS G V + + G +
Sbjct: 362 GVHGYGKKAIQIFEEML-ANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGEEA 226
+ MVDL + + K+ M E VW S++ ++ E A
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 262 bits (669), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 153/572 (26%), Positives = 276/572 (48%), Gaps = 74/572 (12%)
Query: 187 AKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLS 246
AK G ++S R++FD M E D W+++++ Y+ +EA+ F + KPD + +
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 247 STLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRI--D 304
+ L C + ++ G ++ +I++G V + L+ +Y A K+FR + D
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 305 DKDIV-------------------------------AWNSMILAHAQLGQGSSRSMQLLQ 333
++ V AWN MI HA G+ S + L +
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES-CLSLFK 193
Query: 334 ELHRTTSLQIQGATLIAILKSCK-NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSE 392
E+ + + T +++ +C + S++ GR +H++++K+ S N+++ Y++
Sbjct: 194 EMLES-EFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTK 252
Query: 393 CGQIGDAFKAFVDIVCKDDSSWSSIIGT-------------------------------Y 421
G DA + I SW+SII Y
Sbjct: 253 LGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGY 312
Query: 422 KQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDV 481
+NG +AL EM+ G+ ++ + +CS L + GK H I G+
Sbjct: 313 GRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA 372
Query: 482 YVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKN 541
YVG++++++YAKCG ++++ + F + V +N M+ + HG A QA++++ + +
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 542 GVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEE 601
G+ P+ VTF+ +L+ CSH+G +E+ +F M+ Y+I E +H +C++D +GR G L E
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAE 492
Query: 602 A-------YQIVQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSN 654
A +V + S+W TLL AC H +T++G + +K + PS+ S++LLSN
Sbjct: 493 AKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSN 552
Query: 655 IYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+Y G+W+E D R +M + G+KK PG SW+
Sbjct: 553 LYCSTGRWKEGEDVRREMVERGMKKTPGCSWI 584
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 223/496 (44%), Gaps = 84/496 (16%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP + V W T+++S+ R G +A LF +R D +P++Y+F+ +L CA+ G
Sbjct: 30 MPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFG 89
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNL------RDACC---------------- 98
+I +++RSG +SL+ MY L RD CC
Sbjct: 90 RKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYM 149
Query: 99 ----------VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFV 148
VF ++ +R AWN+MISG A G LF EM E E KPD TF
Sbjct: 150 NAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESE-FKPDCYTFS 208
Query: 149 SLLKCCST----------LGEVMQIHGLAS-------------KFGAETDA--------- 176
SL+ CS + VM +G +S K G+ DA
Sbjct: 209 SLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEV 268
Query: 177 ---VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
V ++++D K G+ ++F EK+ W+++I+GY N GE+A+ FF +M
Sbjct: 269 LTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM 328
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
K V D + L AC + L G +HG +I G Q +V + L+ LYA G +
Sbjct: 329 MKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDI 388
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
++A++ F I +KD+V+WN+M+ A G + ++++L + + ++ T I +L
Sbjct: 389 KEADRAFGDIANKDLVSWNTMLFAFGVHGL-ADQALKLYDNM-IASGIKPDNVTFIGLLT 446
Query: 354 SCKNKSDLPAGRQIHSLVMKS-----SVSHPTLVGNALVHMYSECGQIGDA---FKAFVD 405
+C + + G I ++K V H T ++ M+ G + +A +
Sbjct: 447 TCSHSGLVEEGCMIFESMVKDYRIPLEVDHVT----CMIDMFGRGGHLAEAKDLATTYSS 502
Query: 406 IVC--KDDSSWSSIIG 419
+V ++SSW +++G
Sbjct: 503 LVTDSSNNSSWETLLG 518
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 217/475 (45%), Gaps = 74/475 (15%)
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG 158
VF + E D VAWN M++ ++++G LF+++ KPD+ +F ++L C++LG
Sbjct: 26 VFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL-RFSDAKPDDYSFTAILSTCASLG 84
Query: 159 EV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIF-----DS--------- 201
V +I L + G V+++++D+Y KC D S K+F DS
Sbjct: 85 NVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSL 144
Query: 202 -------------------MEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQ 242
M ++ F W+ +ISG+ + E + FK+M + KPD
Sbjct: 145 LFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDC 204
Query: 243 HVLSSTLRAC-VEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK--- 298
+ SS + AC + ++ G VH M+KNG + + +L+ Y G DA +
Sbjct: 205 YTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELE 264
Query: 299 ----------------------------LFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQ 330
+F +K+IV W +MI + + G G ++++
Sbjct: 265 SIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDG-EQALR 323
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMY 390
E+ + + + A+L +C + L G+ IH ++ VGNALV++Y
Sbjct: 324 FFVEMMK-SGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLY 382
Query: 391 SECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLP 450
++CG I +A +AF DI KD SW++++ + +G+ +AL+L M+A GI + +
Sbjct: 383 AKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFI 442
Query: 451 LCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVG--SSIIDMYAKCGHMEDSKKV 503
+++CS + G +K Y + V + +IDM+ + GH+ ++K +
Sbjct: 443 GLLTTCSHSGLVEEGCMIFESMVKD-YRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 191/664 (28%), Positives = 309/664 (46%), Gaps = 56/664 (8%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RN V++ T+I + + G V KA+ +F++MR PN+ T S LL +CA+ + G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLDV-RAG 132
Query: 61 LQIHGVLVRSGL-ERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
Q+HG+ ++ GL D F G+ L+ +Y L A VF D+ + L WN M+S
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRL-DLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK---CCSTLGEVMQIHGLASKFGAETDA 176
G F E+ + G +F+ +LK C L Q+H A+K G + +
Sbjct: 192 HRGFLKECMFFFRELVRM-GASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V ++++ Y KCG+ ++F D W++II + +A+ F M +
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
P+Q S L ++ L+ G Q+HG +IKNG + + + L+ YA G L D+
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRS--MQLLQELHRTTSLQIQGATLIAILKS 354
F I DK+IV WN+++ +A S +Q+LQ R T A LKS
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTA-----LKS 425
Query: 355 CKNKSDLPAGRQIHSLVMKSS------------------------------VSHPTLVG- 383
C + +Q+HS++++ S PT V
Sbjct: 426 CC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVP 481
Query: 384 -NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGI 442
N + +YS GQ ++ K + D SW+ I ++ E +EL K ML I
Sbjct: 482 LNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNI 541
Query: 443 TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN-HDVYVGSSIIDMYAKCGHMEDSK 501
Y+ +S CS+L + +G H K+ ++ D +V + +IDMY KCG +
Sbjct: 542 RPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVM 601
Query: 502 KVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG 561
KVF+ + N + + A+I HG ++A+E F G P++V+F+++L+AC H G
Sbjct: 602 KVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGG 661
Query: 562 YIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTL 618
+++ + LF M Y ++PE +HY C VD R G L+EA ++++ WRT
Sbjct: 662 MVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTF 720
Query: 619 LSAC 622
L C
Sbjct: 721 LDGC 724
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 156/626 (24%), Positives = 286/626 (45%), Gaps = 59/626 (9%)
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST-L 157
VF + ER+ V++N +I G+++ GD +FSEM G P+ T LL C S +
Sbjct: 71 VFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM-RYFGYLPNQSTVSGLLSCASLDV 129
Query: 158 GEVMQIHGLASKFGA-ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISG 216
Q+HGL+ K+G DA V + ++ LY + + ++F+ M K W+ ++S
Sbjct: 130 RAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMS- 188
Query: 217 YTVNNRG--EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ 274
+ +RG +E + FF+++ + + L+ ++DL+ Q+H K G
Sbjct: 189 -LLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLD 247
Query: 275 NDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQE 334
+ V + L++ Y G AE++F+ DIV+WN++I A A+ + ++++L
Sbjct: 248 CEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAK-SENPLKALKLFVS 306
Query: 335 LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECG 394
+ QG T +++L L GRQIH +++K+ ++GNAL+ Y++CG
Sbjct: 307 MPEHGFSPNQG-TYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCG 365
Query: 395 QIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCIS 454
+ D+ F I K+ W++++ Y N L L +ML G T Y+ +
Sbjct: 366 NLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 455 SCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVI 514
SC + +Q H ++ GY + YV SS++ YAK M D+ + D P V+
Sbjct: 425 SC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 515 YNAMICG-YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
++ G Y+ GQ +++++ + LE+ P+ V++ ++ACS + Y E+ + LF M
Sbjct: 481 PLNIVAGIYSRRGQYHESVKLISTLEQ----PDTVSWNIAIAACSRSDYHEEVIELFKHM 536
Query: 574 LYKYKIKPE----------------------------SEHYSC--------LVDAYGRAG 597
L + I+P+ +SC L+D YG+ G
Sbjct: 537 L-QSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 598 RLEEAYQIVQKDGSES--AWRTLLSACRNHNNTKIGEKSAKKMIELN-PSDHASYILLSN 654
+ ++ ++ ++ W L+S H + + K+ + L D S+I +
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
Query: 655 IYIEEGKWEEARDCREKMAKTGVKKD 680
G +E +KM GV+ +
Sbjct: 656 ACRHGGMVKEGMGLFQKMKDYGVEPE 681
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 203/428 (47%), Gaps = 19/428 (4%)
Query: 140 LKPDNRTFVSLLKCC---STLGEVMQIHGLASKFGAE--TDAVVSSAMVDLYAKCGDVSS 194
L N VSLL C + +H L+ + V + ++ LY K G+VS
Sbjct: 8 LANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSL 67
Query: 195 CRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVE 254
K+FD M E++ +++II GY+ ++A F +M P+Q +S L +C
Sbjct: 68 AGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCAS 126
Query: 255 IEDLNTGVQVHGQMIKNG-HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNS 313
+ D+ G Q+HG +K G D FV + LL LY L AE++F + K + WN
Sbjct: 127 L-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNH 185
Query: 314 M--ILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV 371
M +L H + M +EL R + + ++ + +LK DL +Q+H
Sbjct: 186 MMSLLGHRGFLK---ECMFFFRELVRMGA-SLTESSFLGVLKGVSCVKDLDISKQLHCSA 241
Query: 372 MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEAL 431
K + V N+L+ Y +CG A + F D D SW++II ++ +AL
Sbjct: 242 TKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKAL 301
Query: 432 ELCKEMLAEGITFT--SYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIID 489
+L M G + +Y L +SS QLL+ G+Q H IK+G + +G+++ID
Sbjct: 302 KLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLS--CGRQIHGMLIKNGCETGIVLGNALID 359
Query: 490 MYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVT 549
YAKCG++EDS+ FD N V +NA++ GYA+ + +F + + G P + T
Sbjct: 360 FYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQMLQMGFRPTEYT 418
Query: 550 FLAMLSAC 557
F L +C
Sbjct: 419 FSTALKSC 426
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 170/352 (48%), Gaps = 8/352 (2%)
Query: 278 FVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHR 337
+V + +++LY G + A K+F ++ +++ V++N++I +++ G ++ + E+
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGD-VDKAWGVFSEMRY 108
Query: 338 TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHP-TLVGNALVHMYSECGQI 396
L Q + ++ L SC + D+ AG Q+H L +K + VG L+ +Y +
Sbjct: 109 FGYLPNQ--STVSGLLSCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLL 165
Query: 397 GDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSC 456
A + F D+ K +W+ ++ G E + +E++ G + T S +
Sbjct: 166 EMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGV 225
Query: 457 SQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYN 516
S + +++ KQ H A K G + ++ V +S+I Y KCG+ ++++F + V +N
Sbjct: 226 SCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
A+IC A +A+++F + ++G +PNQ T++++L S + + ML K
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG-MLIK 344
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ--KDGSESAWRTLLSACRNHN 626
+ + L+D Y + G LE++ +D + W LLS N +
Sbjct: 345 NGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD 396
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 453 ISSCSQLLAINVGKQFHVFAIK--SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKP 510
++ C + + K H +I S VYV ++II +Y K G + + KVFD +
Sbjct: 19 LNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPER 78
Query: 511 NEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLF 570
N+V +N +I GY+ +G +A +F+ + G PNQ T +LS S + L
Sbjct: 79 NKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAGTQLH 136
Query: 571 TLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES--AWRTLLS 620
L L ++ +CL+ YGR LE A Q+ + +S W ++S
Sbjct: 137 GLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMS 188
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 194/691 (28%), Positives = 333/691 (48%), Gaps = 60/691 (8%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
W ++S + + +A FND + F ++ +ACA + W
Sbjct: 25 WREVVSGY---SEIQRAGVQFND---------PFVFPIVFKACAKLS-W----------- 60
Query: 69 RSGLERDKFAGSSLVYMYSNNG---SNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFC 125
F G+S+ Y G S LR+ C + RD V+WNV++ G G
Sbjct: 61 -------LFQGNSIADFYMKCGDLCSGLREFDC----MNSRDSVSWNVIVFGLLDYGFEE 109
Query: 126 MVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL---GEVMQIHGLASKFGAETDAVVSSAM 182
FS++ V G +P+ T V ++ C +L GE +IHG + G + V +++
Sbjct: 110 EGLWWFSKL-RVWGFEPNTSTLVLVIHACRSLWFDGE--KIHGYVIRSGFCGISSVQNSI 166
Query: 183 VDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ-RVKPD 241
+ +YA D S RK+FD M E+D WS +I Y + + FK+M + + +PD
Sbjct: 167 LCMYAD-SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPD 225
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ-NDCFVASVLLTLYANFGGLRDAEKLF 300
++S L+AC +ED++ G VHG I+ G D FV + L+ +Y+ + A ++F
Sbjct: 226 CVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVF 285
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
++IV+WNS ILA Q ++++ L ++++ T++++L+ CK
Sbjct: 286 DETTCRNIVSWNS-ILAGFVHNQRYDEALEMFH-LMVQEAVEVDEVTVVSLLRVCKFFEQ 343
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
+ IH ++++ + ++L+ Y+ C + DA + KD S S++I
Sbjct: 344 PLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISG 403
Query: 421 YKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN-H 479
G EA+ + M T SL +++CS + K H AI+ +
Sbjct: 404 LAHAGRSDEAISIFCHMRDTPNAITVISL---LNACSVSADLRTSKWAHGIAIRRSLAIN 460
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLE 539
D+ VG+SI+D YAKCG +E +++ FD + N + + +I YA +G +A+ +F ++
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 540 KNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRL 599
+ G TPN VT+LA LSAC+H G ++ L +F M+ + KP +HYSC+VD RAG +
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEI 579
Query: 600 EEAYQIVQK-----DGSESAWRTLLSACRNH-NNTKIGEKSAKKMIELNPSDHASYILLS 653
+ A ++++ SAW +LS CRN I + +++EL P + Y+L S
Sbjct: 580 DTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLAS 639
Query: 654 NIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+ + E WE+ R + + V+ G S
Sbjct: 640 STFAAEKSWEDVAMMRRLVKERKVRVVAGYS 670
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 268/529 (50%), Gaps = 17/529 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R+ V+W ++ L G + F+ +RV PN T +++ AC + LW G
Sbjct: 87 MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRS--LWFDG 144
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IHG ++RSG +S++ MY+++ S A +F ++ ERD+++W+V+I + Q
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDS--LSARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAE-TDA 176
+ + +LF EM +PD T S+LK C+ + ++ +HG + + G + D
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV 262
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V ++++D+Y+K DV S ++FD ++ W+SI++G+ N R +EA+ F M ++
Sbjct: 263 FVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE 322
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
V+ D+ + S LR C E +HG +I+ G++++ S L+ Y + + DA
Sbjct: 323 AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDA 382
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+ + KD+V+ ++MI A G+ S ++ + + T + T+I++L +C
Sbjct: 383 GTVLDSMTYKDVVSCSTMISGLAHAGR-SDEAISIFCHMRDTPN----AITVISLLNACS 437
Query: 357 NKSDLPAGRQIHSLVMKSSVS-HPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+DL + H + ++ S++ + VG ++V Y++CG I A + F I K+ SW+
Sbjct: 438 VSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWT 497
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS 475
II Y NG+ +AL L EM +G T + + +S+C+ + G ++
Sbjct: 498 VIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE 557
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKV---FDAQVKPNEVIYNAMICG 521
+ + S I+DM ++ G ++ + ++ VK + A++ G
Sbjct: 558 DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 165/583 (28%), Positives = 295/583 (50%), Gaps = 15/583 (2%)
Query: 40 NEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCV 99
N TFS LL AC G Q+H + +GLE ++F + LV+MY+ GS ++DA V
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS-VKDAQKV 168
Query: 100 FHDLLERDLVAWNVMISGFAQVGD--FCMVQRLFSEMWEVEGLKPDNRTFVSLLKC---C 154
F + ++ +WN ++ G G + V F+EM E+ G+ + + ++ K
Sbjct: 169 FDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMREL-GVDLNVYSLSNVFKSFAGA 227
Query: 155 STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSII 214
S L + ++ H LA K G + +++VD+Y KCG V R++FD + E+D VW ++I
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 215 SGYTVNNRGEEAVHFFKDMC-KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN-G 272
+G N R EA+ F+ M ++++ P+ +L++ L +++ L G +VH ++K+
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 273 HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ--GSSRSMQ 330
+ FV S L+ LY G + ++F ++ ++W +++ +A G+ + RS+
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMY 390
+Q+ + T+ +L C + G++IH +K+ + +L+ MY
Sbjct: 408 WMQQ----EGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMY 463
Query: 391 SECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLP 450
S+CG + F + ++ +W+++I Y +N +E+ + ML S ++
Sbjct: 464 SKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMG 523
Query: 451 LCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKP 510
++ CS L A+ +GK+ H +K + +V + II MY KCG + + FDA
Sbjct: 524 RVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVK 583
Query: 511 NEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLF 570
+ + A+I Y + + AI F + G TPN TF A+LS CS AG++++ F
Sbjct: 584 GSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFF 643
Query: 571 TLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES 613
LML Y ++P EHYS +++ R GR+EEA ++ S S
Sbjct: 644 NLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAVMSSSSS 686
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 252/516 (48%), Gaps = 30/516 (5%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQ----LFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
NV +W L+ + +G K +Q F +MR + N Y+ S + ++ A + G
Sbjct: 176 NVYSWNALLRGTVISGK--KRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQG 233
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
L+ H + +++GL F +SLV MY G + A VF +++ERD+V W MI+G A
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCG-KVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS-----TLGEVMQIHGLASKFGAETD 175
LF M E + P++ ++L LG+ + H L SK E
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVE-Q 351
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
V S ++DLY KCGD++S R++F ++++ W++++SGY N R ++A+ M +
Sbjct: 352 PFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ 411
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+ +PD +++ L C E+ + G ++H +KN + + + L+ +Y+ G
Sbjct: 412 EGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEY 471
Query: 296 AEKLFRRIDDKDIVAWNSMI---LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAIL 352
+LF R++ +++ AW +MI + + L G +L HR S+ T+ +L
Sbjct: 472 PIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSV-----TMGRVL 526
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS 412
C + L G+++H ++K V ++ MY +CG + A +F + K
Sbjct: 527 TVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSL 586
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF---- 468
+W++II Y N + +A+ ++M++ G T +++ +S CSQ ++ +F
Sbjct: 587 TWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Query: 469 -HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
++ ++ H S +I++ +CG +E+++++
Sbjct: 647 LRMYNLQPSEEH----YSLVIELLNRCGRVEEAQRL 678
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 8/362 (2%)
Query: 202 MEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP-DQHVLSSTLRACVEIEDLNT 260
+ K+ ++ I + N E A+ D +QR P + S+ L ACV + L
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTIL-DYLEQRGIPVNATTFSALLEACVRRKSLLH 129
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
G QVH + NG +++ F+ + L+ +Y G ++DA+K+F ++ +WN+++
Sbjct: 130 GKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALL--RGT 187
Query: 321 LGQGSSRSMQLLQEL--HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSH 378
+ G R +L R + + +L + KS S L G + H+L +K+ + +
Sbjct: 188 VISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFN 247
Query: 379 PTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEML 438
+ +LV MY +CG++G A + F +IV +D W ++I N + EAL L + M+
Sbjct: 248 SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMI 307
Query: 439 A-EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS-GYNHDVYVGSSIIDMYAKCGH 496
+ E I S L + + A+ +GK+ H +KS Y +V S +ID+Y KCG
Sbjct: 308 SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGD 367
Query: 497 MEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSA 556
M ++VF + N + + A++ GYA +G+ QA+ +++ G P+ VT +L
Sbjct: 368 MASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPV 427
Query: 557 CS 558
C+
Sbjct: 428 CA 429
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 139/286 (48%), Gaps = 5/286 (1%)
Query: 341 LQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAF 400
+ + T A+L++C + L G+Q+H + + + + LVHMY+ CG + DA
Sbjct: 107 IPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQ 166
Query: 401 KAFVDIVCKDDSSWSSIIGTYKQNGME--SEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
K F + + SW++++ +G + + L EM G+ YSL S +
Sbjct: 167 KVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAG 226
Query: 459 LLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAM 518
A+ G + H AIK+G + V++ +S++DMY KCG + +++VFD V+ + V++ AM
Sbjct: 227 ASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAM 286
Query: 519 ICGYAHHGQAKQAIEIF-TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKY 577
I G AH+ + +A+ +F TM+ + + PN V +L ++ + +L
Sbjct: 287 IAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSK 346
Query: 578 KIKPESEHYSCLVDAYGRAGRLEEAYQIV--QKDGSESAWRTLLSA 621
+ +S L+D Y + G + ++ K + +W L+S
Sbjct: 347 NYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSG 392
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 5/271 (1%)
Query: 3 HRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQ 62
RN ++WT L+S + G +A + M+ RP+ T + +L CA G +
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
IH +++ + +SL+ MYS G +F L +R++ AW MI + +
Sbjct: 440 IHCYALKNLFLPNVSLVTSLMVMYSKCGVP-EYPIRLFDRLEQRNVKAWTAMIDCYVENC 498
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVS 179
D +F M + +PD+ T +L CS L + ++HG K E+ VS
Sbjct: 499 DLRAGIEVFRLML-LSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS 557
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
+ ++ +Y KCGD+ S FD++ K + W++II Y N +A++ F+ M +
Sbjct: 558 ARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFT 617
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
P+ ++ L C + ++ + M++
Sbjct: 618 PNTFTFTAVLSICSQAGFVDEAYRFFNLMLR 648
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 6/202 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+ RNV WT +I ++ + ++F M + RP+ T +L C+ +G
Sbjct: 479 LEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLG 538
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++HG +++ E F + ++ MY G +LR A F + + + W +I +
Sbjct: 539 KELHGHILKKEFESIPFVSARIIKMYGKCG-DLRSANFSFDAVAVKGSLTWTAIIEAYGC 597
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHG----LASKFGAETDA 176
F F +M G P+ TF ++L CS G V + + + + +
Sbjct: 598 NELFRDAINCFEQMVS-RGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSE 656
Query: 177 VVSSAMVDLYAKCGDVSSCRKI 198
S +++L +CG V +++
Sbjct: 657 EHYSLVIELLNRCGRVEEAQRL 678
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 90/194 (46%), Gaps = 8/194 (4%)
Query: 422 KQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDV 481
+QN +E AL + + GI + + + +C + ++ GKQ HV +G +
Sbjct: 88 RQNNLEV-ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNE 146
Query: 482 YVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAK--QAIEIFTMLE 539
++ + ++ MY CG ++D++KVFD N +NA++ G G+ + + FT +
Sbjct: 147 FLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMR 206
Query: 540 KNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRL 599
+ GV N + + + + A + L L + K + + LVD Y + G++
Sbjct: 207 ELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAI-KNGLFNSVFLKTSLVDMYFKCGKV 265
Query: 600 EEAY----QIVQKD 609
A +IV++D
Sbjct: 266 GLARRVFDEIVERD 279
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 250/494 (50%), Gaps = 55/494 (11%)
Query: 237 RVKPDQHVLS--------STLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
R PD + L S LR+C I + + +H ++I+ H D FV L+ + +
Sbjct: 16 RRDPDSNTLRLSRRKTLISVLRSCKNIAHVPS---IHAKIIRTFHDQDAFVVFELIRVCS 72
Query: 289 NFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT--TSLQIQGA 346
+ A +F + + ++ + +MI S RS + HR S+
Sbjct: 73 TLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVS----SGRSADGVSLYHRMIHNSVLPDNY 128
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG----------------------- 383
+ ++LK+C DL R+IH+ V+K VG
Sbjct: 129 VITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEM 184
Query: 384 --------NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCK 435
+++ YSECG I +A + F D+ KD W+++I +N ++ALEL +
Sbjct: 185 PDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFR 244
Query: 436 EMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCG 495
EM E ++ ++ +S+CS L A+ +G+ H F +VG+++I+MY++CG
Sbjct: 245 EMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCG 304
Query: 496 HMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLS 555
+ ++++VF + + YN MI G A HG + +AI F + G PNQVT +A+L+
Sbjct: 305 DINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLN 364
Query: 556 ACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES-- 613
ACSH G ++ L +F M + ++P+ EHY C+VD GR GRLEEAY+ ++ E
Sbjct: 365 ACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDH 424
Query: 614 -AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKM 672
TLLSAC+ H N ++GEK AK++ E D +Y+LLSN+Y GKW+E+ + RE M
Sbjct: 425 IMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Query: 673 AKTGVKKDPGSSWL 686
+G++K+PG S +
Sbjct: 485 RDSGIEKEPGCSTI 498
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 190/418 (45%), Gaps = 43/418 (10%)
Query: 145 RTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE 204
+T +S+L+ C + V IH + + DA V ++ + + V +F +
Sbjct: 30 KTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSN 89
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
+ ++++++I G+ + R + V + M V PD +V++S L+AC DL ++
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREI 145
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG-- 322
H Q++K G + V ++ +Y G L +A+K+F + D+D VA MI +++ G
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 323 ----------------------QGSSRSMQLLQELHRTTSLQIQGA-----TLIAILKSC 355
G R+ ++ + L +Q++ T + +L +C
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+ L GR +HS V + VGNAL++MYS CG I +A + F + KD S++
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYN 325
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF-----HV 470
++I +G EA+ ++M+ G +L +++CS +++G + V
Sbjct: 326 TMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRV 385
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD-AQVKPNEVIYNAMICGYAHHGQ 527
F ++ H I+D+ + G +E++ + + ++P+ ++ ++ HG
Sbjct: 386 FNVEPQIEH----YGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN 439
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 170/401 (42%), Gaps = 40/401 (9%)
Query: 43 TFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHD 102
T +LR+C A IH ++R+ ++D F L+ + S S + A VF
Sbjct: 31 TLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDS-VDYAYDVFSY 86
Query: 103 LLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ 162
+ ++ + MI GF G L+ M + PDN S+LK C L +
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIH-NSVLPDNYVITSVLKACD-LKVCRE 144
Query: 163 IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE------------------ 204
IH K G + V M+++Y K G++ + +K+FD M +
Sbjct: 145 IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 204
Query: 205 -------------KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRA 251
KD W+++I G N +A+ F++M + V ++ L A
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 264
Query: 252 CVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAW 311
C ++ L G VH + + FV + L+ +Y+ G + +A ++FR + DKD++++
Sbjct: 265 CSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISY 324
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV 371
N+MI A G + ++R + TL+A+L +C + L G ++ + +
Sbjct: 325 NTMISGLAMHGASVEAINEFRDMVNR--GFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Query: 372 MKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDD 411
+ P + +V + G++ +A++ +I + D
Sbjct: 383 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPD 423
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 141/305 (46%), Gaps = 33/305 (10%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
++ V WT +I +R + KA +LF +M++ + NE+T +L AC+ +G +
Sbjct: 218 KDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWV 277
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
H + +E F G++L+ MYS G ++ +A VF + ++D++++N MISG A G
Sbjct: 278 HSFVENQRMELSNFVGNALINMYSRCG-DINEARRVFRVMRDKDVISYNTMISGLAMHGA 336
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMV 183
F +M G +P+ T V+LL CS HG G E
Sbjct: 337 SVEAINEFRDMVN-RGFRPNQVTLVALLNACS--------HGGLLDIGLEV--------- 378
Query: 184 DLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQH 243
+S +++F+ + ++ + I+ R EEA F +++ ++PD
Sbjct: 379 --------FNSMKRVFNVEPQIEH--YGCIVDLLGRVGRLEEAYRFIENI---PIEPDHI 425
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRI 303
+L + L AC ++ G ++ ++ ++ D +L LYA+ G +++ ++ +
Sbjct: 426 MLGTLLSACKIHGNMELGEKIAKRLFES-ENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Query: 304 DDKDI 308
D I
Sbjct: 485 RDSGI 489
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 202/709 (28%), Positives = 343/709 (48%), Gaps = 82/709 (11%)
Query: 1 MPHRN----VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPAL 56
+P R VV WT+L+S + + G + +A LF VM ER N T + +L
Sbjct: 68 IPQRGSINRVVYWTSLLSKYAKTGYLDEARVLF---EVMPER-NIVTCNAMLTGYVKCRR 123
Query: 57 WNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMIS 116
N L R + ++ + + ++ ++G + DA +F ++ ER++V+WN +++
Sbjct: 124 MNEAW----TLFRE-MPKNVVSWTVMLTALCDDGRS-EDAVELFDEMPERNVVSWNTLVT 177
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFG--AET 174
G + GD +++F M +R VS E + FG +E
Sbjct: 178 GLIRNGDMEKAKQVFDAM--------PSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK 229
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
+ V ++MV Y + GDV ++F M E++ W+++ISG+ N EA+ F +M
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK 289
Query: 235 KQ--RVKPDQHVLSSTLRAC--VEIEDLNTGVQVHGQMIKNGHQ---NDCFVASVLLTLY 287
K V P+ L S AC + +E G Q+H Q+I NG + +D +A L+ +Y
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 288 ANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGAT 347
A+ G ++A AQ LL E S +Q
Sbjct: 350 ASSG-----------------------LIASAQ---------SLLNE-----SFDLQSCN 372
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV 407
+I I + KN DL + +L + H + +++ Y E G + AF F +
Sbjct: 373 II-INRYLKN-GDL---ERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH 427
Query: 408 CKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ 467
KD +W+ +I QN + +EA L +M+ G+ + + + +SS ++ GK
Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 468 FHVFAIKSG--YNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHH 525
H K+ Y+ D+ + +S++ MYAKCG +ED+ ++F V+ + V +N+MI G +HH
Sbjct: 488 IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHH 547
Query: 526 GQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEH 585
G A +A+ +F + +G PN VTFL +LSACSH+G I L LF M Y I+P +H
Sbjct: 548 GLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDH 607
Query: 586 YSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSAC----RNHNNTKIGEKSAKKM 638
Y ++D GRAG+L+EA + + + + LL C R+ + I E++A ++
Sbjct: 608 YISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRL 667
Query: 639 IELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWLI 687
+EL+P + ++ L N+Y G+ + ++ R++M GVKK PG SW++
Sbjct: 668 LELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVV 716
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 282/542 (52%), Gaps = 20/542 (3%)
Query: 157 LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISG 216
L +V Q HG K G + + ++ Y K + K+FD M ++ W+ +I G
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG 111
Query: 217 YT-----VNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
N+R + + V D +R C + ++ G+Q+H M+K
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 272 GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQL 331
G ++ CF ++ L+ Y G + +A ++F + D+D+V WN+++ ++ G + L
Sbjct: 172 GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM-IDEAFGL 230
Query: 332 LQELHRTTSLQIQGA--TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHM 389
L+ L + + +G T ++L +C+ + G+QIH+++ K S V AL++M
Sbjct: 231 LK-LMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 390 YSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSL 449
Y++ + DA + F +V ++ SW+++I + QNG EA+ L +ML E + +
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 450 PLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK 509
+SSC++ AI KQ K G + V +S+I Y++ G++ ++ F + +
Sbjct: 346 ASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE 405
Query: 510 PNEVIYNAMICGYAHHGQAKQAIEIF-TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLN 568
P+ V + ++I A HG A++++++F +ML+K + P+++TFL +LSACSH G +++ L
Sbjct: 406 PDLVSWTSVIGALASHGFAEESLQMFESMLQK--LQPDKITFLEVLSACSHGGLVQEGLR 463
Query: 569 LFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWRTLLS---ACRNH 625
F M YKI+ E EHY+CL+D GRAG ++EA ++ +E + L + C H
Sbjct: 464 CFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIH 523
Query: 626 NNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVK-KDPGSS 684
+ + AKK++E+ P+ +Y +LSN Y+ EG W +A R++ + K PG S
Sbjct: 524 EKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCS 583
Query: 685 WL 686
WL
Sbjct: 584 WL 585
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 238/481 (49%), Gaps = 48/481 (9%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
Q HG +V+ G+ F + L+ Y+ DA +F ++ R++V WN++I G Q
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKI-REFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 122 -GD--------FCMVQR-LFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLAS 168
GD FC + R LF++ + D+ +F+ L++ C + + +Q+H L
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTD------VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV 169
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVH 228
K G E+ S+++V Y KCG + R++F+++ ++D +W++++S Y +N +EA
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 229 FFKDMC--KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTL 286
K M K R + D SS L AC + G Q+H + K +Q D VA+ LL +
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 287 YANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA 346
YA L DA + F + +++V+WN+MI+ AQ G+G +M+L ++ +LQ
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEG-REAMRLFGQM-LLENLQPDEL 343
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI 406
T ++L SC S + +Q+ ++V K + V N+L+ YS G + +A F I
Sbjct: 344 TFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSI 403
Query: 407 VCKDDSSWSSIIGTYKQNGMESEALELCKEML----AEGITFTSYSLPLCISSCSQLLAI 462
D SW+S+IG +G E+L++ + ML + ITF +S+CS +
Sbjct: 404 REPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLE-----VLSACSHGGLV 458
Query: 463 NVG-----KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNA 517
G + + I++ H + +ID+ + G ++++ V ++ P E +A
Sbjct: 459 QEGLRCFKRMTEFYKIEAEDEH----YTCLIDLLGRAGFIDEASDVLNSM--PTEPSTHA 512
Query: 518 M 518
+
Sbjct: 513 L 513
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 215/429 (50%), Gaps = 16/429 (3%)
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSM 314
++ L+ Q HG M+K G N F+ + LL Y DA+KLF + ++IV WN
Sbjct: 49 LDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN-- 106
Query: 315 ILAHAQL---GQGSSRSMQLLQELHRT--TSLQIQGATLIAILKSCKNKSDLPAGRQIHS 369
IL H + G + R+ L R T + + + + +++ C + +++ AG Q+H
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 370 LVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESE 429
L++K + +LVH Y +CG I +A + F ++ +D W++++ +Y NGM E
Sbjct: 167 LMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDE 226
Query: 430 ALELCKEMLAEGITFTS--YSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSI 487
A L K M ++ F ++ +S+C I GKQ H K Y D+ V +++
Sbjct: 227 AFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATAL 282
Query: 488 IDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQ 547
++MYAK H+ D+++ F++ V N V +NAMI G+A +G+ ++A+ +F + + P++
Sbjct: 283 LNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE 342
Query: 548 VTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ 607
+TF ++LS+C+ I + + ++ K S S L+ +Y R G L EA
Sbjct: 343 LTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANS-LISSYSRNGNLSEALLCFH 401
Query: 608 --KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEA 665
++ +W +++ A +H + + + M++ D +++ + + G +E
Sbjct: 402 SIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEG 461
Query: 666 RDCREKMAK 674
C ++M +
Sbjct: 462 LRCFKRMTE 470
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 182/364 (50%), Gaps = 17/364 (4%)
Query: 1 MPHRNVVTWTTLISSHL-RAGSVPK----AFQLFNDMRVMDERPNEYTFSVLLRACATPA 55
MP RN+VTW LI + R G F + + D + +F L+R C
Sbjct: 97 MPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDST 156
Query: 56 LWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMI 115
G+Q+H ++V+ GLE F +SLV+ Y G + +A VF +L+RDLV WN ++
Sbjct: 157 NMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGL-IVEARRVFEAVLDRDLVLWNALV 215
Query: 116 SGFAQVG----DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFG 171
S + G F +++ + S+ G D TF SLL C + + QIH + K
Sbjct: 216 SSYVLNGMIDEAFGLLKLMGSDKNRFRG---DYFTFSSLLSACR-IEQGKQIHAILFKVS 271
Query: 172 AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFK 231
+ D V++A++++YAK +S R+ F+SM ++ W+++I G+ N G EA+ F
Sbjct: 272 YQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFG 331
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFG 291
M + ++PD+ +S L +C + + QV + K G + VA+ L++ Y+ G
Sbjct: 332 QMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNG 391
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
L +A F I + D+V+W S+I A A G + S+Q+ + + LQ T + +
Sbjct: 392 NLSEALLCFHSIREPDLVSWTSVIGALASHG-FAEESLQMFESM--LQKLQPDKITFLEV 448
Query: 352 LKSC 355
L +C
Sbjct: 449 LSAC 452
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/586 (27%), Positives = 283/586 (48%), Gaps = 72/586 (12%)
Query: 172 AETDAVVSSAMVDLYAKCGDVSSCRKIFDSME--EKDNFVWSSIISGYTVNNRGEEAVHF 229
+E D + + MV Y GD++ R +F+ +D +++++I+G++ NN G A++
Sbjct: 76 SEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINL 135
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEI-EDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F M + KPD +S L + +D VQ H +K+G V++ L+++Y+
Sbjct: 136 FCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYS 195
Query: 289 NFGG----LRDAEKLFRRIDDKDIVAWNSMILAHAQLG---------QGSSRSMQL---- 331
L A K+F I +KD +W +M+ + + G +G +M+L
Sbjct: 196 KCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 332 ---------------LQELHRTTS--LQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS 374
L+ + R S +++ T +++++C L G+Q+H+ V++
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTY------------- 421
N+LV +Y +CG+ +A F + KD SW++++ Y
Sbjct: 316 E-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 422 ------------------KQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
+NG E L+L M EG Y+ I SC+ L A
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 464 VGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYA 523
G+Q+H +K G++ + G+++I MYAKCG +E++++VF + V +NA+I
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494
Query: 524 HHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPES 583
HG +A++++ + K G+ P+++T L +L+ACSHAG ++ F M Y+I P +
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 584 EHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIE 640
+HY+ L+D R+G+ +A +++ + W LLS CR H N ++G +A K+
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Query: 641 LNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
L P +Y+LLSN++ G+WEE R+ M GVKK+ SW+
Sbjct: 615 LIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWI 660
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 41/283 (14%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
+V + +IS ++ G +A ++ M +E+T+ ++RACAT L +G Q+H
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 66 VLVRSGLERDKFA---GSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
++R R+ F+ +SLV +Y G +A +F + +DLV+WN ++SG+ G
Sbjct: 311 YVLR----REDFSFHFDNSLVSLYYKCG-KFDEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 123 DFCMVQRLFSEM-------WEV-----------------------EGLKPDNRTFVSLLK 152
+ +F EM W + EG +P + F +K
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 153 CCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
C+ LG Q H K G ++ +A++ +YAKCG V R++F +M D+
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS 485
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRAC 252
W+++I+ + G EAV +++M K+ ++PD+ L + L AC
Sbjct: 486 WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 7/232 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M +N+++W +IS G + +LF+ M+ P +Y FS +++CA + G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q H L++ G + AG++L+ MY+ G + +A VF + D V+WN +I+ Q
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGV-VEEARQVFRTMPCLDSVSWNALIAALGQ 495
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G ++ EM + +G++PD T +++L CS G V Q + + + A
Sbjct: 496 HGHGAEAVDVYEEMLK-KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNF-VWSSIISGYTVNNRGEEAV 227
+ ++DL + G S + +S+ K +W +++SG V+ E +
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/555 (28%), Positives = 277/555 (49%), Gaps = 17/555 (3%)
Query: 142 PDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRK-IFD 200
P+ + L+ CS+L QI D ++ + +V K D +S I
Sbjct: 4 PEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILH 63
Query: 201 SMEEK-DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLN 259
S+ +F +++++S Y V ++ + +K PD +AC + +
Sbjct: 64 SIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIR 123
Query: 260 TGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHA 319
G Q+HG + K G +D +V + L+ Y G R+A K+F + +D+V+W +I
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGII---- 179
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQG--ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
G +R+ + L + + ++ AT + +L S L G+ IH L++K +
Sbjct: 180 ---TGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEM 437
GNAL+ MY +C Q+ DA + F ++ KD SW+S+I EA++L M
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
Query: 438 -LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGH 496
+ GI + L +S+C+ L A++ G+ H + + +G D ++G++I+DMYAKCG+
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGY 356
Query: 497 MEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSA 556
+E + ++F+ N +NA++ G A HG +++ F + K G PN VTFLA L+A
Sbjct: 357 IETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNA 416
Query: 557 CSHAGYIEDTLNLFTLMLYK-YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAW 615
C H G +++ F M + Y + P+ EHY C++D RAG L+EA ++V+ +
Sbjct: 417 CCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDV 476
Query: 616 R---TLLSACRNHNN-TKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREK 671
R +LSAC+N ++ ++ +++ D Y+LLSNI+ +W++ R
Sbjct: 477 RICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRL 536
Query: 672 MAKTGVKKDPGSSWL 686
M G+ K PGSS++
Sbjct: 537 MKVKGISKVPGSSYI 551
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 198/406 (48%), Gaps = 46/406 (11%)
Query: 39 PNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACC 98
P+ +TF + +AC + G QIHG++ + G D + +SLV+ Y G + R+AC
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGES-RNACK 162
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC----- 153
VF ++ RD+V+W +I+GF + G + FS+M +VE P+ T+V +L
Sbjct: 163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM-DVE---PNLATYVCVLVSSGRVG 218
Query: 154 CSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSI 213
C +LG+ IHGL K + +A++D+Y KC +S ++F +E+KD W+S+
Sbjct: 219 CLSLGK--GIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSM 276
Query: 214 ISGYTVNNRGEEAVHFFKDM-CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG 272
ISG R +EA+ F M +KPD H+L+S L AC + ++ G VH ++ G
Sbjct: 277 ISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG 336
Query: 273 HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLL 332
+ D + + ++ +YA G + A ++F I K++ WN+++ A G G S++
Sbjct: 337 IKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHG-LESLRYF 395
Query: 333 QELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQ-IHSLVMKSSVSHPTLVGNALVHMYS 391
+E+ + + T +A L +C + + GR+ H + + P L
Sbjct: 396 EEMVK-LGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKL---------- 444
Query: 392 ECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEM 437
+ + +D++C+ G+ EALEL K M
Sbjct: 445 ------EHYGCMIDLLCR--------------AGLLDEALELVKAM 470
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 138/271 (50%), Gaps = 7/271 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+VV+WT +I+ R G +A F+ MD PN T+ +L + ++G
Sbjct: 167 MPVRDVVSWTGIITGFTRTGLYKEALDTFSK---MDVEPNLATYVCVLVSSGRVGCLSLG 223
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
IHG++++ G++L+ MY L DA VF +L ++D V+WN MISG
Sbjct: 224 KGIHGLILKRASLISLETGNALIDMYVKC-EQLSDAMRVFGELEKKDKVSWNSMISGLVH 282
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAV 177
LFS M G+KPD S+L C++LG V +H G + D
Sbjct: 283 CERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTH 342
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
+ +A+VD+YAKCG + + +IF+ + K+ F W++++ G ++ G E++ +F++M K
Sbjct: 343 IGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG 402
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQM 268
KP+ + L AC ++ G + +M
Sbjct: 403 FKPNLVTFLAALNACCHTGLVDEGRRYFHKM 433
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 110/230 (47%), Gaps = 11/230 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
+ ++ V+W ++IS + +A LF+ M+ +P+ + + +L ACA+ +
Sbjct: 265 LEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDH 324
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G +H ++ +G++ D G+++V MY+ G + A +F+ + +++ WN ++ G A
Sbjct: 325 GRWVHEYILTAGIKWDTHIGTAIVDMYAKCG-YIETALEIFNGIRSKNVFTWNALLGGLA 383
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASK-FGAET 174
G R F EM ++ G KP+ TF++ L C G V + H + S+ +
Sbjct: 384 IHGHGLESLRYFEEMVKL-GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFP 442
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK-DNFVWSSIISGYTVNNRG 223
M+DL + G + ++ +M K D + +I+S NRG
Sbjct: 443 KLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA--CKNRG 490
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 249/481 (51%), Gaps = 35/481 (7%)
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK 298
KP + ++ C + L G +VH + +G + + LL +YA G L DA K
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 299 LFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI--------------Q 344
+F + ++D+ +WN M+ +A++G + +L E+ S +
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGL-LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEE 200
Query: 345 GATLIAILKSCKNKSD-----------------LPAGRQIHSLVMKSSVSHPTLVGNALV 387
L ++++ N + G++IH ++++ + ++ ++L+
Sbjct: 201 ALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLM 260
Query: 388 HMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSY 447
MY +CG I +A F IV KD SW+S+I Y ++ E L E++ Y
Sbjct: 261 DMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEY 320
Query: 448 SLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ 507
+ +++C+ L +GKQ H + + G++ + SS++DMY KCG++E +K V D
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 508 VKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTL 567
KP+ V + ++I G A +GQ +A++ F +L K+G P+ VTF+ +LSAC+HAG +E L
Sbjct: 381 PKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL 440
Query: 568 NLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRN 624
F + K+++ S+HY+CLVD R+GR E+ ++ + S+ W ++L C
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST 500
Query: 625 HNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+ N + E++A+++ ++ P + +Y+ ++NIY GKWEE R++M + GV K PGSS
Sbjct: 501 YGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSS 560
Query: 685 W 685
W
Sbjct: 561 W 561
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 229/494 (46%), Gaps = 56/494 (11%)
Query: 118 FAQVGDFCMVQRLFSEMWEVEGL--KPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGA 172
F + D Q+L E ++ G KP T+ +L++ CS L E ++H G
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 116
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSME----------------------------- 203
V+ + ++ +YAKCG + RK+FD M
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 204 --EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV---KPDQHVLSSTLRACVEIEDL 258
EKD++ W+++++GY ++ EEA+ + M QRV +P+ +S + A ++ +
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLM--QRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 259 NTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI--- 315
G ++HG +++ G +D + S L+ +Y G + +A +F +I +KD+V+W SMI
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRY 294
Query: 316 LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS 375
++ +G S +L+ R T +L +C + + G+Q+H + +
Sbjct: 295 FKSSRWREGFSLFSELVGSCERPNEY-----TFAGVLNACADLTTEELGKQVHGYMTRVG 349
Query: 376 VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD-SSWSSIIGTYKQNGMESEALELC 434
+ ++LV MY++CG I A K VD K D SW+S+IG QNG EAL+
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESA-KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYF 408
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSGYNHDVYVGSSIIDMYAK 493
+L G + +S+C+ + G + F+ K +H + ++D+ A+
Sbjct: 409 DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLAR 468
Query: 494 CGHMEDSKKVF-DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTP-NQVTFL 551
G E K V + +KP++ ++ +++ G + +G A E L K + P N VT++
Sbjct: 469 SGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYV 526
Query: 552 AMLSACSHAGYIED 565
M + + AG E+
Sbjct: 527 TMANIYAAAGKWEE 540
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 201/441 (45%), Gaps = 45/441 (10%)
Query: 37 ERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDA 96
++P T+ L++ C+ G ++H + SG + L+ MY+ GS L DA
Sbjct: 81 KKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGS-LVDA 139
Query: 97 CCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLK--------------- 141
VF ++ RDL +WNVM++G+A+VG ++LF EM E +
Sbjct: 140 RKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPE 199
Query: 142 ------------PDNRTFVSLLKC---------CSTLGEVMQIHGLASKFGAETDAVVSS 180
P++R + + C G+ +IHG + G ++D V+ S
Sbjct: 200 EALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK--EIHGHIVRAGLDSDEVLWS 257
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
+++D+Y KCG + R IFD + EKD W+S+I Y ++R E F ++ +P
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERP 317
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
+++ + L AC ++ G QVHG M + G F +S L+ +Y G + A+ +
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV 377
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
D+V+W S+I AQ GQ +++ L ++ + + T + +L +C +
Sbjct: 378 DGCPKPDLVSWTSLIGGCAQNGQ-PDEALKYFDLLLKSGT-KPDHVTFVNVLSACTHAGL 435
Query: 361 LPAGRQ-IHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS--WSSI 417
+ G + +S+ K +SH + LV + + G+ + K+ + + S W+S+
Sbjct: 436 VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF-EQLKSVISEMPMKPSKFLWASV 494
Query: 418 IGTYKQNGMESEALELCKEML 438
+G G A E +E+
Sbjct: 495 LGGCSTYGNIDLAEEAAQELF 515
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 141/267 (52%), Gaps = 6/267 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNV 59
M ++ +WT +++ +++ +A L++ M RV + RPN +T S+ + A A
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G +IHG +VR+GL+ D+ SSL+ MY G + +A +F ++E+D+V+W MI +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGC-IDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDA 176
+ + LFSE+ +P+ TF +L C+ L Q+HG ++ G + +
Sbjct: 296 KSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS 354
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
SS++VD+Y KCG++ S + + D + D W+S+I G N + +EA+ +F + K
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQ 263
KPD + L AC + G++
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLE 441
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 7/218 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
++VV+WT++I + ++ + F LF+++ ERPNEYTF+ +L ACA +G Q+
Sbjct: 282 KDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQV 341
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
HG + R G + FA SSLV MY+ G N+ A V + DLV+W +I G AQ G
Sbjct: 342 HGYMTRVGFDPYSFASSSLVDMYTKCG-NIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQ 400
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDAVVS 179
+ F + + G KPD+ TFV++L C+ G V + + + K +
Sbjct: 401 PDEALKYFDLLLK-SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY 459
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDN-FVWSSIISG 216
+ +VDL A+ G + + M K + F+W+S++ G
Sbjct: 460 TCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGG 497
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 259/531 (48%), Gaps = 10/531 (1%)
Query: 162 QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNN 221
++H +K D ++ + YA D+ S RK+FD E+ F+W+SII Y +
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAH 85
Query: 222 RGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVAS 281
+ + F + + +PD + R E D +HG I +G D S
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGS 145
Query: 282 VLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG--QGSSRSMQLLQELHRTT 339
++ Y+ G + +A KLF I D D+ WN MIL + G L+Q HR
Sbjct: 146 AIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ--HRGH 203
Query: 340 SLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDA 399
Q T++A+ + S L +H+ +K ++ + VG ALV+MYS C I A
Sbjct: 204 --QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASA 261
Query: 400 FKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQL 459
F I D + SS+I Y + G EAL L E+ G + + + SC++L
Sbjct: 262 CSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAEL 321
Query: 460 LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMI 519
GK+ H + I+ G D+ V S++IDMY+KCG ++ + +F + N V +N++I
Sbjct: 322 SDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLI 381
Query: 520 CGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKI 579
G HG A A E FT + + G+ P+++TF A+L C H+G + +F M ++ I
Sbjct: 382 LGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGI 441
Query: 580 KPESEHYSCLVDAYGRAGRLEEAYQIV---QKDGSESAWRTLLSACRNHNNTKIGEKSAK 636
+P++EHY +V G AG+LEEA++ V QK LLS C H NT + E A+
Sbjct: 442 EPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAE 501
Query: 637 KMIELNPSDHASY-ILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ + + Y ++LSN+Y G+W+E R+ ++++ K PG SW
Sbjct: 502 NIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISWF 552
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 193/371 (52%), Gaps = 9/371 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
P R+V W ++I ++ +A LF+ + D RP+ +T++ L R + + G
Sbjct: 66 FPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARG-FSESFDTKG 124
Query: 61 LQ-IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
L+ IHG+ + SGL D+ GS++V YS G + +A +F + + DL WNVMI G+
Sbjct: 125 LRCIHGIAIVSGLGFDQICGSAIVKAYSKAGL-IVEASKLFCSIPDPDLALWNVMILGYG 183
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSL---LKCCSTLGEVMQIHGLASKFGAETDA 176
G + LF+ M + G +P+ T V+L L S L +H K ++ +
Sbjct: 184 CCGFWDKGINLFNLM-QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V A+V++Y++C ++S +F+S+ E D SS+I+GY+ +EA+H F ++
Sbjct: 243 YVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS 302
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
KPD +++ L +C E+ D +G +VH +I+ G + D V S L+ +Y+ G L+ A
Sbjct: 303 GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCA 362
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
LF I +K+IV++NS+IL G S+ + + L L T A+L +C
Sbjct: 363 MSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILE--MGLIPDEITFSALLCTCC 420
Query: 357 NKSDLPAGRQI 367
+ L G++I
Sbjct: 421 HSGLLNKGQEI 431
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 5/271 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P ++ W +I + G K LFN M+ +PN YT L P+L V
Sbjct: 167 IPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVA 226
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+H ++ L+ + G +LV MYS + AC VF+ + E DLVA + +I+G+++
Sbjct: 227 WSVHAFCLKINLDSHSYVGCALVNMYSRCMC-IASACSVFNSISEPDLVACSSLITGYSR 285
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAV 177
G+ LF+E+ + G KPD +L C+ L + + ++H + G E D
Sbjct: 286 CGNHKEALHLFAEL-RMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIK 344
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V SA++D+Y+KCG + +F + EK+ ++S+I G ++ A F ++ +
Sbjct: 345 VCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMG 404
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQM 268
+ PD+ S+ L C LN G ++ +M
Sbjct: 405 LIPDEITFSALLCTCCHSGLLNKGQEIFERM 435
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 40/299 (13%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++V ++LI+ + R G+ +A LF ++R+ ++P+ +++L +CA + G ++H
Sbjct: 272 DLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVH 331
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
++R GLE D S+L+ MYS G L+ A +F + E+++V++N +I G G
Sbjct: 332 SYVIRLGLELDIKVCSALIDMYSKCGL-LKCAMSLFAGIPEKNIVSFNSLILGLGLHGFA 390
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDAVVSS 180
F+E+ E+ GL PD TF +LL C G + + + S+FG E
Sbjct: 391 STAFEKFTEILEM-GLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYV 449
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
MV L G + EEA F + K
Sbjct: 450 YMVKLMGMAGKL-------------------------------EEAFEFVMSLQK---PI 475
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
D +L + L C E+ + V + KNG + +L +YA +G + E+L
Sbjct: 476 DSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERL 534
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 173/675 (25%), Positives = 313/675 (46%), Gaps = 87/675 (12%)
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
+GL IHG L++ GL+ S + +L A +F ++ +RD +AWN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFGAETD 175
+ G++ LF EM + G K + T V LL+ CS E QIHG + G E++
Sbjct: 65 LRSGNWEKAVELFREM-QFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEK------------------------------ 205
+ ++++ +Y++ G + RK+F+SM+++
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 206 -----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNT 260
D W+S++SGY ++A+ K M +KP +SS L+A E L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI--LAH 318
G +HG +++N D +V + L+ +Y G L A +F +D K+IVAWNS++ L++
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 319 AQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSH 378
A L L +L I+ + K +
Sbjct: 304 ACL-------------LKDAEALMIR--------------------------MEKEGIKP 324
Query: 379 PTLVGNALVHMYSECGQIGDAFKAFVDI----VCKDDSSWSSIIGTYKQNGMESEALELC 434
+ N+L Y+ G+ A + V + SW++I +NG AL++
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKC 494
+M EG+ + ++ + L ++ GK+ H F ++ D YV ++++DMY K
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 444
Query: 495 GHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAML 554
G ++ + ++F + +N M+ GYA G+ ++ I F+++ + G+ P+ +TF ++L
Sbjct: 445 GDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Query: 555 SACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGS 611
S C ++G +++ F LM +Y I P EH SC+VD GR+G L+EA+ +Q
Sbjct: 505 SVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPD 564
Query: 612 ESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREK 671
+ W LS+C+ H + ++ E + K++ L P + A+Y+++ N+Y +WE+ R
Sbjct: 565 ATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNL 624
Query: 672 MAKTGVKKDPGSSWL 686
M V+ SW+
Sbjct: 625 MRNNRVRVQDLWSWI 639
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 189/424 (44%), Gaps = 42/424 (9%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++VTW +L+S + G A + M++ +P+ + S LL+A A P +G IH
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
G ++R+ L D + ++L+ MY G L A VF + +++VAWN ++SG +
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGY-LPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVD 184
+ L M E EG+KPD A+ +++
Sbjct: 308 KDAEALMIRM-EKEGIKPD--------------------------------AITWNSLAS 334
Query: 185 LYAKCGDVSSCRKIFDSMEEK---DNFV-WSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
YA G + M+EK N V W++I SG + N A+ F M ++ V P
Sbjct: 335 GYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
+ +S+ L+ + L++G +VHG ++ D +VA+ L+ +Y G L+ A ++F
Sbjct: 395 NAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF 454
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
I +K + +WN M++ +A G+G L ++ T ++L CKN
Sbjct: 455 WGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLE--AGMEPDAITFTSVLSVCKNSGL 512
Query: 361 LPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSII 418
+ G + L+ PT+ + +V + G + +A+ + K D++ W + +
Sbjct: 513 VQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFL 572
Query: 419 GTYK 422
+ K
Sbjct: 573 SSCK 576
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 254/513 (49%), Gaps = 10/513 (1%)
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
VV ++++ LYAKCG + K+FD M +D + + G+ N E K M
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
D L+ L C E +H I +G+ + V + L+T Y G
Sbjct: 151 G-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 297 EKLFRRIDDKDIVAWNSMI--LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
+F + ++++ ++I L +L + R L+ R + T ++ L +
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM----RRGLVHPNSVTYLSALAA 265
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
C + G+QIH+L+ K + + +AL+ MYS+CG I DA+ F D+ S
Sbjct: 266 CSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSM 325
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+ I+ QNG E EA++ ML G+ + + + ++ +GKQ H IK
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK 385
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
++ + +V + +I+MY+KCG + DS+ VF K N V +N+MI +A HG A+++
Sbjct: 386 RKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKL 445
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
+ + V P VTFL++L ACSH G I+ L M + I+P +EHY+C++D G
Sbjct: 446 YEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLG 505
Query: 595 RAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYIL 651
RAG L+EA + + W+ LL AC H +T++GE +A+++ + P +++IL
Sbjct: 506 RAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHIL 565
Query: 652 LSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
++NIY GKW+E ++M GV K+ G S
Sbjct: 566 IANIYSSRGKWKERAKTIKRMKAMGVTKETGIS 598
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 231/474 (48%), Gaps = 45/474 (9%)
Query: 3 HRN-VVTWTTLISSHLRAGSVPKAFQLFNDMRVMD-------------ERPNE------- 41
HRN +V W +L+S + + G + A +LF++M + D R E
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145
Query: 42 ----------YTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGS 91
T +++L C TP V IH + + SG +++ G+ L+ Y G
Sbjct: 146 RMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205
Query: 92 NLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGL-KPDNRTFVSL 150
++ VF + R+++ +ISG + RLFS M GL P++ T++S
Sbjct: 206 SVSGR-GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMR--RGLVHPNSVTYLSA 262
Query: 151 LKCCS---TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN 207
L CS + E QIH L K+G E++ + SA++D+Y+KCG + IF+S E D
Sbjct: 263 LAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE 322
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
+ I+ G N EEA+ FF M + V+ D +V+S+ L L G Q+H
Sbjct: 323 VSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSL 382
Query: 268 MIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSR 327
+IK + FV + L+ +Y+ G L D++ +FRR+ ++ V+WNSMI A A+ G G +
Sbjct: 383 VIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLA- 441
Query: 328 SMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHP-TLVGNAL 386
+++L +E+ T ++ T +++L +C + + GR++ + + + P T +
Sbjct: 442 ALKLYEEM-TTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCI 500
Query: 387 VHMYSECGQIGDAFKAFVD-IVCKDDSS-WSSIIGTYKQNGMESEALELCKEML 438
+ M G + +A K+F+D + K D W +++G +G ++E E E L
Sbjct: 501 IDMLGRAGLLKEA-KSFIDSLPLKPDCKIWQALLGACSFHG-DTEVGEYAAEQL 552
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 186/402 (46%), Gaps = 24/402 (5%)
Query: 261 GVQVHGQMIKNG----------HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA 310
G +H +IKN H+N V + LL+LYA G L DA KLF + +D+++
Sbjct: 64 GPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVIS 123
Query: 311 WNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSL 370
N + + + S + L + L S ATL +L C + IH+L
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRML---GSGGFDHATLTIVLSVCDTPEFCLVTKMIHAL 180
Query: 371 VMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEA 430
+ S VGN L+ Y +CG F + ++ + +++I +N + +
Sbjct: 181 AILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDG 240
Query: 431 LELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDM 490
L L M + S + +++CS I G+Q H K G ++ + S+++DM
Sbjct: 241 LRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDM 300
Query: 491 YAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTF 550
Y+KCG +ED+ +F++ + +EV ++ G A +G ++AI+ F + + GV +
Sbjct: 301 YSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA--- 357
Query: 551 LAMLSACSHAGYIEDTLNL---FTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ 607
++SA +I+++L L ++ K K + + L++ Y + G L ++ + +
Sbjct: 358 -NVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFR 416
Query: 608 KDGSES--AWRTLLSACRNHNNTKIGEKSAKKM--IELNPSD 645
+ + +W ++++A H + K ++M +E+ P+D
Sbjct: 417 RMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTD 458
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/445 (31%), Positives = 249/445 (55%), Gaps = 9/445 (2%)
Query: 249 LRACVEIEDLNTGVQVHGQMIKNGH-QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKD 307
L AC+ + L+ G+++ ++ N +++ + S L+TL++ L A K+F + D
Sbjct: 138 LHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSS 197
Query: 308 IVA---WNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG 364
++ W +M + +++ GS R ++ + ++ ++ LK+C + DL G
Sbjct: 198 LLTEKVWAAMAIGYSR--NGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVG 255
Query: 365 RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQN 424
R IH+ ++K +V N L+ +Y E G DA K F + ++ +W+S+I +
Sbjct: 256 RGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKK 315
Query: 425 GMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVG 484
E L ++M E I F+ +L + +CS++ A+ GK+ H +KS DV +
Sbjct: 316 VRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL 375
Query: 485 SSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVT 544
+S++DMY KCG +E S++VFD + + +N M+ YA +G ++ I +F + ++GV
Sbjct: 376 NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA 435
Query: 545 PNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQ 604
P+ +TF+A+LS CS G E L+LF M ++++ P EHY+CLVD GRAG+++EA +
Sbjct: 436 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 605 IVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGK 661
+++ S S W +LL++CR H N +GE +AK++ L P + +Y+++SNIY +
Sbjct: 496 VIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKM 555
Query: 662 WEEARDCREKMAKTGVKKDPGSSWL 686
W+ RE M + GVKK+ G SW+
Sbjct: 556 WDNVDKIREMMKQRGVKKEAGCSWV 580
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 5/264 (1%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
W + + R GS A ++ DM P ++ SV L+AC VG IH +
Sbjct: 203 VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQI 262
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMV 127
V+ + D+ + L+ +Y +G DA VF + ER++V WN +IS ++ +
Sbjct: 263 VKRKEKVDQVVYNVLLKLYMESGL-FDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEM 321
Query: 128 QRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVD 184
LF +M E E + T ++L CS + ++ +IH K + D + ++++D
Sbjct: 322 FNLFRKMQE-EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMD 380
Query: 185 LYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHV 244
+Y KCG+V R++FD M KD W+ +++ Y +N EE ++ F+ M + V PD
Sbjct: 381 MYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGIT 440
Query: 245 LSSTLRACVEIEDLNTGVQVHGQM 268
+ L C + G+ + +M
Sbjct: 441 FVALLSGCSDTGLTEYGLSLFERM 464
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 184/410 (44%), Gaps = 15/410 (3%)
Query: 39 PNEYTFSVLLRACATPALWNVGLQIHGVLVRS-GLERDKFAGSSLVYMYSNNGSNLRDAC 97
P YT LL AC + + G++I +++ + L + S L+ ++S L A
Sbjct: 131 PEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSV-CRRLDLAR 187
Query: 98 CVFHDLLERDLVA---WNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
+F D+ + L+ W M G+++ G ++ +M ++P N + LK C
Sbjct: 188 KIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML-CSFIEPGNFSISVALKAC 246
Query: 155 STLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWS 211
L ++ IH K + D VV + ++ LY + G RK+FD M E++ W+
Sbjct: 247 VDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWN 306
Query: 212 SIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
S+IS + R E + F+ M ++ + L++ L AC + L TG ++H Q++K+
Sbjct: 307 SLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKS 366
Query: 272 GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQL 331
+ D + + L+ +Y G + + ++F + KD+ +WN M+ +A G+ +
Sbjct: 367 KEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAI--NGNIEEVIN 424
Query: 332 LQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMY 390
L E + + G T +A+L C + G + + P L A LV +
Sbjct: 425 LFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDIL 484
Query: 391 SECGQIGDAFKAFVDIVCKDDSS-WSSIIGTYKQNGMESEALELCKEMLA 439
G+I +A K + K +S W S++ + + +G S KE+
Sbjct: 485 GRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFV 534
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 11/222 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M RNVVTW +LIS + V + F LF M+ + T + +L AC+ A G
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTG 356
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IH +++S + D +SL+ MY G + + VF +L +DL +WN+M++ +A
Sbjct: 357 KEIHAQILKSKEKPDVPLLNSLMDMYGKCG-EVEYSRRVFDVMLTKDLASWNIMLNCYAI 415
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G+ V LF M E G+ PD TFV+LL CS G + +GL+ +T+ VS
Sbjct: 416 NGNIEEVINLFEWMIE-SGVAPDGITFVALLSGCSDTG--LTEYGLSLFERMKTEFRVSP 472
Query: 181 A------MVDLYAKCGDVSSCRKIFDSMEEKDNF-VWSSIIS 215
A +VD+ + G + K+ ++M K + +W S+++
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 242/469 (51%), Gaps = 11/469 (2%)
Query: 225 EAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL 284
E++ ++ M + PD L++C + +G Q+H + K G + + FV + L+
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 285 TLYANFGGLRDAEKLFRRIDDKD--IVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQ 342
++Y G + DA K+F V +N++I + + + + + + T +
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRR--MKETGVS 153
Query: 343 IQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKA 402
+ T++ ++ C L GR +H +K + V N+ + MY +CG + +
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRL 213
Query: 403 FVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAI 462
F ++ K +W+++I Y QNG+ + LEL ++M + G+ ++L +SSC+ L A
Sbjct: 214 FDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 463 NVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGY 522
+G + +G+ +V+V ++ I MYA+CG++ ++ VFD + V + AMI Y
Sbjct: 274 KIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCY 333
Query: 523 AHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPE 582
HG + + +F + K G+ P+ F+ +LSACSH+G + L LF M +YK++P
Sbjct: 334 GMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPG 393
Query: 583 SEHYSCLVDAYGRAGRLEEAYQI-----VQKDGSESAWRTLLSACRNHNNTKIGEKSAKK 637
EHYSCLVD GRAGRL+EA + V+ DG + W LL AC+ H N + E + K
Sbjct: 394 PEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG--AVWGALLGACKIHKNVDMAELAFAK 451
Query: 638 MIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+IE P++ Y+L+SNIY + E R M + +K PG S++
Sbjct: 452 VIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 190/407 (46%), Gaps = 13/407 (3%)
Query: 24 KAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLV 83
++ L+ M P+ ++F +L++CA+ +L G Q+H + + G E + F ++L+
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 84 YMYSNNGSNLRDACCVFHDLLERDL--VAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLK 141
MY G + DA VF + + V +N +ISG+ +F M E G+
Sbjct: 96 SMYCKCGL-VADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKET-GVS 153
Query: 142 PDNRTFVSLLKCCSTLGEVM----QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRK 197
D+ T + L+ C T+ E + +HG K G +++ V ++ + +Y KCG V + R+
Sbjct: 154 VDSVTMLGLVPLC-TVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRR 212
Query: 198 IFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIED 257
+FD M K W+++ISGY+ N + + ++ M V PD L S L +C +
Sbjct: 213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGA 272
Query: 258 LNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILA 317
G +V + NG + FV++ +++YA G L A +F + K +V+W +MI
Sbjct: 273 KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 332
Query: 318 HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
+ G G M + R ++ GA + +L +C + G ++ + +
Sbjct: 333 YGMHGMGEIGLMLFDDMIKR--GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 390
Query: 378 HPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSIIGTYK 422
P + LV + G++ +A + + + D + W +++G K
Sbjct: 391 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 15/320 (4%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGV 66
V + LIS + V A +F M+ + T L+ C P +G +HG
Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ 181
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCM 126
V+ GL+ + +S + MY GS + +F ++ + L+ WN +ISG++Q G
Sbjct: 182 CVKGGLDSEVAVLNSFITMYMKCGS-VEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYD 240
Query: 127 VQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMV 183
V L+ +M + G+ PD T VS+L C+ LG ++ L G + VS+A +
Sbjct: 241 VLELYEQM-KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASI 299
Query: 184 DLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQH 243
+YA+CG+++ R +FD M K W+++I Y ++ GE + F DM K+ ++PD
Sbjct: 300 SMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGA 359
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQM-----IKNGHQNDCFVASVLLTLYANFGGLRDAEK 298
V L AC + G+++ M ++ G ++ S L+ L G L +A +
Sbjct: 360 VFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH----YSCLVDLLGRAGRLDEAME 415
Query: 299 LFRRID-DKDIVAWNSMILA 317
+ + D W +++ A
Sbjct: 416 FIESMPVEPDGAVWGALLGA 435
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
+ W+ + + SE++ L + ML G + ++S P + SC+ L G+Q H
Sbjct: 19 TPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNE--VIYNAMICGYAHHGQAK 529
K G + +V +++I MY KCG + D++KVF+ + ++ V YNA+I GY + +
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 530 QAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI 563
A +F +++ GV+ + VT L ++ C+ Y+
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYL 172
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 7/219 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP + ++TW +IS + + G +L+ M+ P+ +T +L +CA +G
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++ ++ +G + F ++ + MY+ G NL A VF + + LV+W MI +
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCG-NLAKARAVFDIMPVKSLVSWTAMIGCYGM 335
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G + LF +M + G++PD FV +L CS G + + ++ E
Sbjct: 336 HGMGEIGLMLFDDMIK-RGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGP 394
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSII 214
S +VDL + G + + +SM E D VW +++
Sbjct: 395 EHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 164/616 (26%), Positives = 292/616 (47%), Gaps = 102/616 (16%)
Query: 80 SSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEG 139
+S+V Y +NG ++A +F ++ ER++V+WN ++SG+ + R+ E V
Sbjct: 52 NSIVSGYFSNGLP-KEARQLFDEMSERNVVSWNGLVSGYIK-------NRMIVEARNVFE 103
Query: 140 LKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIF 199
L P E + V +AMV Y + G V +F
Sbjct: 104 LMP------------------------------ERNVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 200 DSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLN 259
M E++ W+ + G + R ++A + M P + V++ST ++
Sbjct: 134 WRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM------PVKDVVAST--------NMI 179
Query: 260 TGVQVHGQ------MIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNS 313
G+ G+ + + + + ++T Y + A KLF + +K V+W S
Sbjct: 180 GGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTS 239
Query: 314 MILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK 373
M+L + G+ ++ +E ++
Sbjct: 240 MLLGYTLSGR-----IEDAEEFFEVMPMK------------------------------- 263
Query: 374 SSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALEL 433
P + NA++ + E G+I A + F + +D+++W +I Y++ G E EAL+L
Sbjct: 264 -----PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDL 318
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
+M +G+ + SL +S C+ L ++ G+Q H ++ ++ DVYV S ++ MY K
Sbjct: 319 FAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVK 378
Query: 494 CGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAM 553
CG + +K VFD + +++N++I GYA HG ++A++IF + +G PN+VT +A+
Sbjct: 379 CGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAI 438
Query: 554 LSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DG 610
L+ACS+AG +E+ L +F M K+ + P EHYSC VD GRAG++++A ++++
Sbjct: 439 LTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKP 498
Query: 611 SESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCRE 670
+ W LL AC+ H+ + E +AKK+ E P + +Y+LLS+I KW + R+
Sbjct: 499 DATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRK 558
Query: 671 KMAKTGVKKDPGSSWL 686
M V K PG SW+
Sbjct: 559 NMRTNNVSKFPGCSWI 574
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 205/424 (48%), Gaps = 19/424 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNVV+WT ++ +++ G V +A LF M ER NE +++V+ +
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWR---MPER-NEVSWTVMFGGLIDDGRIDKA 160
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+++ ++ +D A ++++ G + +A +F ++ ER++V W MI+G+ Q
Sbjct: 161 RKLYDMMP----VKDVVASTNMIGGLCREG-RVDEARLIFDEMRERNVVTWTTMITGYRQ 215
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
+ ++LF M E + ++ S+L + G + + + +
Sbjct: 216 NNRVDVARKLFEVMPEKTEV-----SWTSMLLGYTLSGRIEDAEEFFEVMPMKP-VIACN 269
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
AM+ + + G++S R++FD ME++DN W +I Y EA+ F M KQ V+P
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
L S L C + L G QVH +++ +D +VASVL+T+Y G L A+ +F
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVF 389
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
R KDI+ WNS+I +A G G ++++ E+ + ++ TLIAIL +C
Sbjct: 390 DRFSSKDIIMWNSIISGYASHGLGEE-ALKIFHEMPSSGTMP-NKVTLIAILTACSYAGK 447
Query: 361 LPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSII 418
L G +I + PT+ + V M GQ+ A + + K D++ W +++
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Query: 419 GTYK 422
G K
Sbjct: 508 GACK 511
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 205/472 (43%), Gaps = 49/472 (10%)
Query: 73 ERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFS 132
ER+ + + LV Y N + +A VF + ER++V+W M+ G+ Q G + LF
Sbjct: 76 ERNVVSWNGLVSGYIKN-RMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 133 EM-------WEV--EGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMV 183
M W V GL D R + L ++M + D V S+ M+
Sbjct: 135 RMPERNEVSWTVMFGGLIDDGR-----IDKARKLYDMMPVK----------DVVASTNMI 179
Query: 184 DLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC-KQRVKPDQ 242
+ G V R IFD M E++ W+++I+GY NNR + A F+ M K V
Sbjct: 180 GGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTS 239
Query: 243 HVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRR 302
+L TL IED +V + ++ + G + A ++F
Sbjct: 240 MLLGYTLSG--RIEDAEEFFEVM-------PMKPVIACNAMIVGFGEVGEISKARRVFDL 290
Query: 303 IDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA-----TLIAILKSCKN 357
++D+D W MI A+ + G L+ L +Q QG +LI+IL C
Sbjct: 291 MEDRDNATWRGMIKAYERKGFE-------LEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
+ L GRQ+H+ +++ V + L+ MY +CG++ A F KD W+SI
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 418 IGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSG 476
I Y +G+ EAL++ EM + G +L +++CS + G + F K
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
Query: 477 YNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQ 527
V S +DM + G ++ + ++ ++ +KP+ ++ A++ H +
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 142/340 (41%), Gaps = 60/340 (17%)
Query: 284 LTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI 343
++ + G + +A K F + K I +WNS++ + G + QL E+ +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGL-PKEARQLFDEMSERNVVSW 82
Query: 344 QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF 403
G I KN+ + A R + L+ + +V T A+V Y + G +G+A F
Sbjct: 83 NGLVSGYI----KNRMIVEA-RNVFELMPERNVVSWT----AMVKGYMQEGMVGEAESLF 133
Query: 404 VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
+ +++ SW+ + G +G +A +L
Sbjct: 134 WRMPERNEVSWTVMFGGLIDDGRIDKARKL------------------------------ 163
Query: 464 VGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYA 523
+ + +K DV +++I + G +++++ +FD + N V + MI GY
Sbjct: 164 ----YDMMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYR 214
Query: 524 HHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPES 583
+ + A ++F ++ + +V++ +ML + +G IED F +M K I
Sbjct: 215 QNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIA--- 267
Query: 584 EHYSCLVDAYGRAGRLEEAYQI--VQKDGSESAWRTLLSA 621
+ ++ +G G + +A ++ + +D + WR ++ A
Sbjct: 268 --CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 205/330 (62%), Gaps = 4/330 (1%)
Query: 359 SDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII 418
+D+ G IHS+V++S V N+L+H+Y+ CG + A+K F + KD +W+S+I
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 419 GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN 478
+ +NG EAL L EM ++GI +++ +S+C+++ A+ +GK+ HV+ IK G
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 479 HDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML 538
+++ + ++D+YA+CG +E++K +FD V N V + ++I G A +G K+AIE+F +
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 539 EKN-GVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAG 597
E G+ P ++TF+ +L ACSH G +++ F M +YKI+P EH+ C+VD RAG
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241
Query: 598 RLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSN 654
++++AY+ ++ + WRTLL AC H ++ + E + ++++L P+ Y+LLSN
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSN 301
Query: 655 IYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+Y E +W + + R++M + GVKK PG S
Sbjct: 302 MYASEQRWSDVQKIRKQMLRDGVKKVPGHS 331
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 141/271 (52%), Gaps = 5/271 (1%)
Query: 157 LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISG 216
LGE IH + + G + V ++++ LYA CGDV+S K+FD M EKD W+S+I+G
Sbjct: 6 LGET--IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 217 YTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQND 276
+ N + EEA+ + +M + +KPD + S L AC +I L G +VH MIK G +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 277 CFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELH 336
++VLL LYA G + +A+ LF + DK+ V+W S+I+ A G G +++L + +
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKE-AIELFKYME 182
Query: 337 RTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQ 395
T L T + IL +C + + G + + + P + +V + + GQ
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 396 IGDAFKAFVDIVCKDDSS-WSSIIGTYKQNG 425
+ A++ + + + W +++G +G
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 151/293 (51%), Gaps = 16/293 (5%)
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
+G IH V++RSG + +SL+++Y+N G ++ A VF + E+DLVAWN +I+GF
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCG-DVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETD 175
A+ G L++EM +G+KPD T VSLL C+ +G + ++H K G +
Sbjct: 65 AENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM-C 234
S+ ++DLYA+CG V + +FD M +K++ W+S+I G VN G+EA+ FK M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA--SVLLTLYANFGG 292
+ + P + L AC + G + +M + ++ + + ++ L A G
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 293 LRDAEKLFRRID-DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQ 344
++ A + + + ++V W +++ A G L E R LQ++
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD------LAEFARIQILQLE 289
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 156/306 (50%), Gaps = 15/306 (4%)
Query: 257 DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMIL 316
D+ G +H +I++G + +V + LL LYAN G + A K+F ++ +KD+VAWNS+I
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 317 AHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSV 376
A+ G+ ++ L E++ + ++ G T++++L +C L G+++H ++K +
Sbjct: 63 GFAENGK-PEEALALYTEMN-SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 377 SHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKE 436
+ N L+ +Y+ CG++ +A F ++V K+ SW+S+I NG EA+EL K
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 437 MLA-EGITFTSYSLPLCISSCSQLLAINVGKQF-----HVFAIKSGYNHDVYVGSSIIDM 490
M + EG+ + + +CS + G ++ + I+ H ++D+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH----FGCMVDL 236
Query: 491 YAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVT 549
A+ G ++ + + + ++PN VI+ ++ HG + A F ++ + PN
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNHSG 294
Query: 550 FLAMLS 555
+LS
Sbjct: 295 DYVLLS 300
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 136/281 (48%), Gaps = 15/281 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP +++V W ++I+ G +A L+ +M +P+ +T LL ACA +G
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++H +++ GL R+ + + L+ +Y+ G + +A +F ++++++ V+W +I G A
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCG-RVEEAKTLFDEMVDKNSVSWTSLIVGLAV 167
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G LF M EGL P TFV +L CS G V + + ++ E
Sbjct: 168 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 227
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV-WSSIISGYTVNNRGEEAVHFFKDMCK 235
MVDL A+ G V + SM + N V W +++ TV+ G+ + F +
Sbjct: 228 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQI 285
Query: 236 QRVKPDQ---HVLSSTLRACVEIEDLNTGVQ-VHGQMIKNG 272
+++P+ +VL S + A E + VQ + QM+++G
Sbjct: 286 LQLEPNHSGDYVLLSNMYAS---EQRWSDVQKIRKQMLRDG 323
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 173/620 (27%), Positives = 295/620 (47%), Gaps = 81/620 (13%)
Query: 147 FVSLLKCCSTLGEVMQIHG--LASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE 204
F LL C T + Q+H L S F + ++ ++ ++ +YA+ G + R +F+++
Sbjct: 59 FDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSL 117
Query: 205 ---KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
D +W+SI+ + E A+ ++ M ++ + D ++L LRAC +
Sbjct: 118 VLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLC 177
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQL 321
H Q+I+ G + + V + LLTLY G + DA LF + ++ ++WN MI +Q
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQE 237
Query: 322 G--QGSSRSMQLLQE-------------------------------LHRTTSLQIQGATL 348
+ + + + +Q L R + + G L
Sbjct: 238 YDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEAL 297
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
C L ++H V+K NAL+H+Y + G++ DA F I
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEM---------LAEGITFTSY------------ 447
K SW+S+I ++ G EAL L E+ A +T+TS
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 448 ----------------SLPLC--ISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIID 489
S+ +C +S C++L A+N+G++ H I++ + ++ V +++++
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVN 477
Query: 490 MYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVT 549
MYAKCG + + VF+A + + +N++I GY HG A++A+ +F + +G P+ +
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIA 537
Query: 550 FLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKD 609
+A+LSACSHAG +E +F M ++ ++P+ EHY+C+VD GR G L+EA +IV+
Sbjct: 538 LVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Query: 610 GSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEAR 666
E LL++CR H N I E A ++ L P SY+LLSNIY G+WEE+
Sbjct: 598 PMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESA 657
Query: 667 DCREKMAKTGVKKDPGSSWL 686
+ R K +KK GSSW+
Sbjct: 658 NVRALAKKKDLKKVSGSSWI 677
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 185/436 (42%), Gaps = 81/436 (18%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
W +++ +++ G A +L+ MR + Y ++LRAC + + H ++
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 69 RSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQ 128
+ GL+ + + L+ +Y G + DA +F ++ R+ ++WNVMI GF+Q D
Sbjct: 186 QIGLKENLHVVNELLTLYPKAG-RMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 129 RLFSEMWEVEGLKPDNRTFVSLLKC---CSTLGEVM------------------------ 161
++F M + E KPD T+ S+L C C +V+
Sbjct: 245 KIFEWM-QREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSV 303
Query: 162 -----------QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----- 205
++HG K G E +A++ +Y K G V +F + K
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESW 363
Query: 206 ----DNFV------------------------------WSSIISGYTVNNRGEEAVHFFK 231
+FV W+S+I G V RG++++ +F+
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFG 291
M +V + + L C E+ LN G ++HG +I+ + V + L+ +YA G
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCG 483
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
L + +F I DKD+++WNS+I + G + +++ + + ++ G L+A+
Sbjct: 484 LLSEGSLVFEAIRDKDLISWNSIIKGYGMHG-FAEKALSMFDRM-ISSGFHPDGIALVAV 541
Query: 352 LKSCKNKSDLPAGRQI 367
L +C + + GR+I
Sbjct: 542 LSACSHAGLVEKGREI 557
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 153/339 (45%), Gaps = 43/339 (12%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGV 66
VTWT+++S H + G + F+ MR+ + +V CA ++ ++HG
Sbjct: 260 VTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGY 319
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCM 126
+++ G E + ++L+++Y G ++DA +F + + + +WN +I+ F G
Sbjct: 320 VIKGGFEEYLPSRNALIHVYGKQG-KVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDE 378
Query: 127 VQRLFSEMWEVE---GLKPDNRTFVSLLKCCSTLG---------------EVM------- 161
LFSE+ E+ +K + T+ S++K C+ G +V+
Sbjct: 379 ALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTIC 438
Query: 162 ----------------QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
+IHG + + +V +A+V++YAKCG +S +F+++ +K
Sbjct: 439 CILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDK 498
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
D W+SII GY ++ E+A+ F M PD L + L AC + G ++
Sbjct: 499 DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIF 558
Query: 266 GQMIKN-GHQNDCFVASVLLTLYANFGGLRDAEKLFRRI 303
M K G + + ++ L G L++A ++ + +
Sbjct: 559 YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
NVVTWT++I G + + F M+ N T +L CA N+G +IH
Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIH 457
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
G ++R+ + + ++LV MY+ G L + VF + ++DL++WN +I G+ G
Sbjct: 458 GHVIRTSMSENILVQNALVNMYAKCGL-LSEGSLVFEAIRDKDLISWNSIIKGYGMHGFA 516
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDAVVSS 180
+F M G PD V++L CS G V + + ++ +FG E +
Sbjct: 517 EKALSMFDRMIS-SGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYA 575
Query: 181 AMVDLYAKCGDVSSCRKIFDSM 202
+VDL + G + +I +M
Sbjct: 576 CIVDLLGRVGFLKEASEIVKNM 597
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 181/695 (26%), Positives = 315/695 (45%), Gaps = 77/695 (11%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M RN+ TW+ +I ++ R + +LF M P+++ F +L+ CA G
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
IH V+++ G+ +S++ +Y+ G L A F + ERD++AWN ++ + Q
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGE-LDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G L EM E EG+ P T+ L+ + LG+ L K ET + +
Sbjct: 260 NGKHEEAVELVKEM-EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM--ETFGITA- 315
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
D F W+++ISG N +A+ F+ M V P
Sbjct: 316 -------------------------DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
+ + S + AC ++ +N G +VH +K G +D V + L+ +Y+ G L DA K+F
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
+ +KD+ WNSMI + Q G ++ +L ++Q A L
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAGY-CGKAYELFT--------RMQDANL------------ 449
Query: 361 LPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDI-----VCKDDSSW 414
P ++ N ++ Y + G G+A F + V ++ ++W
Sbjct: 450 -----------------RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+ II Y QNG + EALEL ++M S ++ + +C+ LL + ++ H ++
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR 552
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
+ V +++ D YAK G +E S+ +F + + +N++I GY HG A+ +
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALAL 612
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
F ++ G+TPN+ T +++ A G +++ +F + Y I P EH S +V YG
Sbjct: 613 FNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYG 672
Query: 595 RAGRLEEAYQIVQKDGSESA---WRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYIL 651
RA RLEEA Q +Q+ +S W + L+ CR H + + +A+ + L P + A+ +
Sbjct: 673 RANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESI 732
Query: 652 LSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+S IY K + + + +KK G SW+
Sbjct: 733 VSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWI 767
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 270/542 (49%), Gaps = 50/542 (9%)
Query: 138 EGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFG--AETDAVVSSAMVDLYAKCGDVSSC 195
+G K T++ LL+ C G + L ++FG E D V + ++ +YAKCG ++
Sbjct: 75 QGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADA 134
Query: 196 RKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEI 255
RK+FDSM E++ F WS++I Y+ NR E F+ M K V PD + L+ C
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 256 EDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI 315
D+ G +H +IK G + V++ +L +YA G L A K FRR+ ++D++AWNS++
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVL 254
Query: 316 LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS 375
LA+ Q G+ +++L++E+ K
Sbjct: 255 LAYCQNGK-HEEAVELVKEME------------------------------------KEG 277
Query: 376 VSHPTLVGNALVHMYSECGQIGDAFKAFVDI----VCKDDSSWSSIIGTYKQNGMESEAL 431
+S + N L+ Y++ G+ A + + D +W+++I NGM +AL
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 432 ELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMY 491
++ ++M G+ + ++ +S+CS L IN G + H A+K G+ DV VG+S++DMY
Sbjct: 338 DMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMY 397
Query: 492 AKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFL 551
+KCG +ED++KVFD+ + +N+MI GY G +A E+FT ++ + PN +T+
Sbjct: 398 SKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Query: 552 AMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK--- 608
M+S G + ++LF M K++ + ++ ++ Y + G+ +EA ++ +K
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF 517
Query: 609 ---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELN-PSDHASYILLSNIYIEEGKWEE 664
+ +LL AC N K+ + ++ N + HA L++ Y + G E
Sbjct: 518 SRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEY 577
Query: 665 AR 666
+R
Sbjct: 578 SR 579
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 238/445 (53%), Gaps = 6/445 (1%)
Query: 245 LSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRID 304
L + +++CV IE +H +++K+ F+ L+ Y G AEKLF +
Sbjct: 37 LIAAVKSCVSIELCRL---LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 305 DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG 364
++D+V+WNS+I ++ G L + + + T ++++ +C G
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 365 RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQN 424
R IH LVMK V V NA ++ Y + G + + K F D+ K+ SW+++I + QN
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 425 GMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVG 484
G+ + L G + + SC + + + + H + G++ + +
Sbjct: 214 GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT 273
Query: 485 SSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVT 544
++++D+Y+K G +EDS VF P+ + + AM+ YA HG + AI+ F ++ G++
Sbjct: 274 TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGIS 333
Query: 545 PNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQ 604
P+ VTF +L+ACSH+G +E+ + F M +Y+I P +HYSC+VD GR+G L++AY
Sbjct: 334 PDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYG 393
Query: 605 IVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGK 661
++++ + S W LL ACR + +T++G K+A+++ EL P D +Y++LSNIY G
Sbjct: 394 LIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGL 453
Query: 662 WEEARDCREKMAKTGVKKDPGSSWL 686
W++A R M + G+ + G S++
Sbjct: 454 WKDASRIRNLMKQKGLVRASGCSYI 478
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 179/386 (46%), Gaps = 16/386 (4%)
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACC--VFHDLLERDLVAWNVMISGFAQ 120
+H +V+S R F G LV Y G D C +F ++ ERDLV+WN +ISG++
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLG---HDVCAEKLFDEMPERDLVSWNSLISGYSG 109
Query: 121 VGDFCMVQRLFSEMWEVE-GLKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAETDA 176
G + S M E G +P+ TF+S++ C G E IHGL KFG +
Sbjct: 110 RGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEV 169
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V +A ++ Y K GD++S K+F+ + K+ W+++I + N E+ + +F +
Sbjct: 170 KVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRV 229
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+PDQ + LR+C ++ + +HG ++ G + + + LL LY+ G L D+
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+F I D +AW +M+ A+A G G EL + T +L +C
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF--ELMVHYGISPDHVTFTHLLNACS 347
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDSS-W 414
+ + G+ + K P L + +V + G + DA+ ++ + S W
Sbjct: 348 HSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVW 407
Query: 415 SSIIG---TYKQNGMESEALELCKEM 437
+++G YK + ++A E E+
Sbjct: 408 GALLGACRVYKDTQLGTKAAERLFEL 433
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 185/402 (46%), Gaps = 10/402 (2%)
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMV 183
F +R S+ V L + + ++ +K C ++ +H K + + +V
Sbjct: 14 FLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLV 73
Query: 184 DLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV--KPD 241
Y + G K+FD M E+D W+S+ISGY+ + M V +P+
Sbjct: 74 GCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPN 133
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR 301
+ S + ACV G +HG ++K G + V + + Y G L + KLF
Sbjct: 134 EVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFE 193
Query: 302 RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
+ K++V+WN+MI+ H Q G + + R + AT +A+L+SC++ +
Sbjct: 194 DLSIKNLVSWNTMIVIHLQ--NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251
Query: 362 PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTY 421
+ IH L+M S + AL+ +YS+ G++ D+ F +I D +W++++ Y
Sbjct: 252 RLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311
Query: 422 KQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSG-YNHD 480
+G +A++ + M+ GI+ + +++CS + GK H F S Y D
Sbjct: 312 ATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGK--HYFETMSKRYRID 369
Query: 481 VYVG--SSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNAMI 519
+ S ++D+ + G ++D+ + + ++P+ ++ A++
Sbjct: 370 PRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 137/264 (51%), Gaps = 21/264 (7%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE--RPNEYTFSVLLRACATPALWN 58
MP R++V+W +LIS + G + K F++ + M + + RPNE TF ++ AC
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMI--- 115
G IHG++++ G+ + ++ + Y G +L +C +F DL ++LV+WN MI
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTG-DLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 116 --SGFAQVG--DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLAS 168
+G A+ G F M +R+ G +PD TF+++L+ C +G V IHGL
Sbjct: 211 LQNGLAEKGLAYFNMSRRV--------GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVH 228
G + +++A++DLY+K G + +F + D+ W+++++ Y + G +A+
Sbjct: 263 FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 229 FFKDMCKQRVKPDQHVLSSTLRAC 252
F+ M + PD + L AC
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNAC 346
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
+N+V+W T+I HL+ G K FN R + P++ TF +LR+C + + I
Sbjct: 198 KNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGI 257
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
HG+++ G +K ++L+ +YS G L D+ VFH++ D +AW M++ +A G
Sbjct: 258 HGLIMFGGFSGNKCITTALLDLYSKLG-RLEDSSTVFHEITSPDSMAWTAMLAAYATHGF 316
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDAVVS 179
+ F M G+ PD+ TF LL CS G V + ++ ++ +
Sbjct: 317 GRDAIKHFELMVHY-GISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY 375
Query: 180 SAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTV 219
S MVDL + G + + M E + VW +++ V
Sbjct: 376 SCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRV 416
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/539 (27%), Positives = 264/539 (48%), Gaps = 48/539 (8%)
Query: 148 VSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGD---VSSCRKIFDSMEE 204
+S + +L E+ Q H K G D +S +V A + VS I + +
Sbjct: 43 LSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGS 102
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
+ F +S+I Y ++ E A+ F++M V PD++ + L+AC G Q+
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
HG IK+G D FV + L+ +Y G A K+ R+ +D V+WNS++ A+ + G
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG-- 220
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
++ + D R + S N
Sbjct: 221 --------------------------LVDEARALFDEMEERNVESW-------------N 241
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
++ Y+ G + +A + F + +D SW++++ Y G +E LE+ +ML +
Sbjct: 242 FMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEK 301
Query: 445 T-SYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
++L +S+C+ L +++ G+ HV+ K G + ++ ++++DMY+KCG ++ + +V
Sbjct: 302 PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 504 FDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI 563
F A K + +N++I + HG K A+EIF+ + G PN +TF+ +LSAC+H G +
Sbjct: 362 FRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGML 421
Query: 564 EDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESA---WRTLLS 620
+ LF +M Y+++P EHY C+VD GR G++EEA ++V + ++ A +LL
Sbjct: 422 DQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLG 481
Query: 621 ACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKK 679
AC+ + E+ A +++ELN D + Y +SN+Y +G+WE+ D R M V +
Sbjct: 482 ACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 227/495 (45%), Gaps = 63/495 (12%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISG 117
Q H ++++GL D F+ S LV + N H +L R + N +I
Sbjct: 57 QAHAFMLKTGLFHDTFSASKLVAFAATNPEP--KTVSYAHSILNRIGSPNGFTHNSVIRA 114
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFGAET 174
+A + +F EM + + PD +F +LK C+ E QIHGL K G T
Sbjct: 115 YANSSTPEVALTVFREML-LGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVT 173
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
D V + +V++Y + G RK+ D M +D W+S++S Y +EA F +M
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
++ V+ ++S YA G ++
Sbjct: 234 ERNVESWNFMISG---------------------------------------YAAAGLVK 254
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
+A+++F + +D+V+WN+M+ A+A +G + +++ ++ ++ + G TL+++L +
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVG-CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSA 313
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
C + L G +H + K + + ALV MYS+CG+I A + F +D S+W
Sbjct: 314 CASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTW 373
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFH----- 469
+SII +G+ +ALE+ EM+ EG + +S+C+ + ++ ++
Sbjct: 374 NSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSS 433
Query: 470 VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNE--VIYNAMICGYAHHGQ 527
V+ ++ H ++D+ + G +E+++++ + ++ +E ++ +++ GQ
Sbjct: 434 VYRVEPTIEH----YGCMVDLLGRMGKIEEAEELVN-EIPADEASILLESLLGACKRFGQ 488
Query: 528 AKQAIEIFT-MLEKN 541
+QA I +LE N
Sbjct: 489 LEQAERIANRLLELN 503
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 193/416 (46%), Gaps = 71/416 (17%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N T ++I ++ + + A +F +M + P++Y+F+ +L+ACA + G QIH
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIH 163
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNG-----------SNLRDAC---------------- 97
G+ ++SGL D F ++LV +Y +G +RDA
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVD 223
Query: 98 ---CVFHDLLER-------------------------------DLVAWNVMISGFAQVGD 123
+F ++ ER D+V+WN M++ +A VG
Sbjct: 224 EARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGC 283
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSS 180
+ V +F++M + KPD T VS+L C++LG + Q +H K G E + +++
Sbjct: 284 YNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLAT 343
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
A+VD+Y+KCG + ++F + ++D W+SIIS +V+ G++A+ F +M + KP
Sbjct: 344 ALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKP 403
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA--SVLLTLYANFGGLRDAEK 298
+ L AC + L+ ++ +M+ + ++ + + ++ L G + +AE+
Sbjct: 404 NGITFIGVLSACNHVGMLDQARKLF-EMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEE 462
Query: 299 LFRRID-DKDIVAWNSMILA---HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
L I D+ + S++ A QL Q + +LL+ R +S Q + L A
Sbjct: 463 LVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYA 518
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 142/315 (45%), Gaps = 20/315 (6%)
Query: 328 SMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALV 387
+++LLQ+ + + +T + IL + L +Q H+ ++K+ + H T + LV
Sbjct: 20 NLRLLQK-ENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLV 78
Query: 388 HMYS---ECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
+ E + A I + + +S+I Y + AL + +EML +
Sbjct: 79 AFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFP 138
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
YS + +C+ G+Q H IKSG DV+V ++++++Y + G+ E ++KV
Sbjct: 139 DKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVL 198
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIE 564
D + V +N+++ Y G +A +F +E+ V ++ M+S + AG ++
Sbjct: 199 DRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVK 254
Query: 565 DTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWR-------T 617
+ +F M + + ++ +V AY G E ++ K +S + +
Sbjct: 255 EAKEVFDSMPVRDVVS-----WNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVS 309
Query: 618 LLSACRNHNNTKIGE 632
+LSAC + + GE
Sbjct: 310 VLSACASLGSLSQGE 324
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/617 (28%), Positives = 309/617 (50%), Gaps = 59/617 (9%)
Query: 117 GFAQVGDFCMVQRLFSEMWE-VEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETD 175
GF G C + + W+ V+ L+ ++++ V LL+ C++ + Q+ +F D
Sbjct: 10 GFRLFGTECGSK---TTKWDPVQSLQLNHQSLV-LLENCNSRNQFKQVLAQIMRFNLICD 65
Query: 176 AVVSSAMVDLYAKC--GDVSSCRKIFDSMEEKDN-FVWSSIISGYTVNNRGEEAVHFFKD 232
S ++ A ++ + +F + N FV++++IS V++ E +
Sbjct: 66 TFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISA--VSSSKNECFGLYSS 123
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQN-DCFVASVLLTLYANFG 291
M + RV PD+ ++A + ++ Q+H +I +G + ++ + L+ Y G
Sbjct: 124 MIRHRVSPDRQTFLYLMKASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELG 180
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG--ATLI 349
AEK+F R+ D+ ++N MI+ +A+ G S++ L+ + S I+ T++
Sbjct: 181 NFGVAEKVFARMPHPDVSSFNVMIVGYAKQG----FSLEALKLYFKMVSDGIEPDEYTVL 236
Query: 350 AILKSCKNKSDLPAGRQIHSLVMKSSVSHPT--LVGNALVHMYSECGQIGDAFKAFVDIV 407
++L C + SD+ G+ +H + + + + ++ NAL+ MY +C + G A +AF +
Sbjct: 237 SLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMK 296
Query: 408 CKDDSSWSS-IIGTYKQNGMES-------------------------------EALELCK 435
KD SW++ ++G + ME+ EL
Sbjct: 297 KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFY 356
Query: 436 EM-LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKC 494
EM + E + ++ IS + ++ G+ H I+ D ++ S++IDMY KC
Sbjct: 357 EMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKC 416
Query: 495 GHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAML 554
G +E + VF + + ++ +MI G A HG +QA+++F +++ GVTPN VT LA+L
Sbjct: 417 GIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVL 476
Query: 555 SACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKD----G 610
+ACSH+G +E+ L++F M K+ PE+EHY LVD RAGR+EEA IVQK
Sbjct: 477 TACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRP 536
Query: 611 SESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCRE 670
S+S W ++LSACR + + E + ++++L P Y+LLSNIY G+W + RE
Sbjct: 537 SQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTRE 596
Query: 671 KMAKTGVKKDPGSSWLI 687
M GVKK G S ++
Sbjct: 597 AMENRGVKKTAGYSSVV 613
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 141/593 (23%), Positives = 253/593 (42%), Gaps = 84/593 (14%)
Query: 46 VLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYS-NNGSNLRDACCVFHDLL 104
VLL C + N Q+ ++R L D F S L++ + NL A +F +
Sbjct: 39 VLLENCNSR---NQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFT 95
Query: 105 ER-DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQI 163
++ +N MIS + + C L+S M + PD +TF+ L+K S L EV QI
Sbjct: 96 PNPNVFVYNTMISAVSSSKNECF--GLYSSMIR-HRVSPDRQTFLYLMKASSFLSEVKQI 152
Query: 164 HGLASKFGA-ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNR 222
H G + +++V Y + G+ K+F M D ++ +I GY
Sbjct: 153 HCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGF 212
Query: 223 GEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG--HQNDCFVA 280
EA+ + M ++PD++ + S L C + D+ G VHG + + G + ++ ++
Sbjct: 213 SLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS 272
Query: 281 SVLLTLY-------------------------------ANFGGLRDAEKLFRRIDDKDIV 309
+ LL +Y G + A+ +F ++ +D+V
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 310 AWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHS 369
+WNS++ +++ G +L E+ ++ T+++++ N +L GR +H
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 370 LVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESE 429
LV++ + + +AL+ MY +CG I AF F KD + W+S+I +G +
Sbjct: 393 LVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQ 452
Query: 430 ALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF---AIKSGYNHDVYVGSS 486
AL+L M EG+T + +L +++CS + G HVF K G++ + S
Sbjct: 453 ALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG--LHVFNHMKDKFGFDPETEHYGS 510
Query: 487 IIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPN 546
++D+ + G +E++K + +K + P+
Sbjct: 511 LVDLLCRAGRVEEAKDIVQ---------------------------------KKMPMRPS 537
Query: 547 QVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESE-HYSCLVDAYGRAGR 598
Q + ++LSAC IE T +L K++PE E Y L + Y GR
Sbjct: 538 QSMWGSILSACRGGEDIETAELALTELL---KLEPEKEGGYVLLSNIYATVGR 587
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 220/478 (46%), Gaps = 60/478 (12%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P+ NV + T+IS+ + S + F L++ M P+ TF L++A + +
Sbjct: 96 PNPNVFVYNTMISA--VSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVK 150
Query: 62 QIHGVLVRSG-LERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
QIH ++ SG L + +SLV Y G N A VF + D+ ++NVMI G+A+
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELG-NFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGA--ETD 175
G +L+ +M +G++PD T +SLL CC L ++ +HG + G ++
Sbjct: 210 QGFSLEALKLYFKMVS-DGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 176 AVVSSAMVDLYAKC-------------------------------GDVSSCRKIFDSMEE 204
++S+A++D+Y KC GD+ + + +FD M +
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK 328
Query: 205 KDNFVWSSIISGYTVNNRGEEAVH--FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGV 262
+D W+S++ GY+ + V F++ ++VKPD+ + S + +L+ G
Sbjct: 329 RDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR 388
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
VHG +I+ + D F++S L+ +Y G + A +F+ +KD+ W SMI A G
Sbjct: 389 WVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHG 448
Query: 323 QGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHS-LVMKSSVSHPTL 381
G +++QL + + TL+A+L +C + + G + + + K T
Sbjct: 449 NG-QQALQLFGRMQE-EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETE 506
Query: 382 VGNALVHMYSECGQIGDAFKAFVDIVCK------DDSSWSSIIGTYKQNGMESEALEL 433
+LV + G++ +A DIV K S W SI+ + G + E EL
Sbjct: 507 HYGSLVDLLCRAGRVEEA----KDIVQKKMPMRPSQSMWGSILSACR-GGEDIETAEL 559
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 36/304 (11%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MPH +V ++ +I + + G +A +L+ M P+EYT LL C + +G
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
Query: 61 LQIHGVLVR------------------------SGLERDKFAGSSLVYMYSNNG------ 90
+HG + R SGL + F M S N
Sbjct: 252 KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311
Query: 91 --SNLRDACCVFHDLLERDLVAWNVMISGFAQVG-DFCMVQRLFSEMWEVEGLKPDNRTF 147
++ A VF + +RDLV+WN ++ G+++ G D V+ LF EM VE +KPD T
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 148 VSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE 204
VSL+ + GE+ +HGL + + DA +SSA++D+Y KCG + +F + E
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
KD +W+S+I+G + G++A+ F M ++ V P+ L + L AC + G+ V
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 265 HGQM 268
M
Sbjct: 492 FNHM 495
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/509 (29%), Positives = 259/509 (50%), Gaps = 55/509 (10%)
Query: 185 LYAKC---GDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPD 241
+ A+C GD+ ++F M K+ W+S++ G +
Sbjct: 67 IIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGIS----------------------- 103
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR 301
+D + ++ H Q+ + D F +++L+ Y A+ F
Sbjct: 104 --------------KDPSRMMEAH-QLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFD 148
Query: 302 RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
R+ KD +WN+MI +A+ G+ M+ +EL + ++ + A++ DL
Sbjct: 149 RMPFKDAASWNTMITGYARRGE-----MEKARELFYSM-MEKNEVSWNAMISGYIECGDL 202
Query: 362 PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI-VCKDDSSWSSIIGT 420
S K + + A++ Y + ++ A F D+ V K+ +W+++I
Sbjct: 203 EKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISG 258
Query: 421 YKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD 480
Y +N + L+L + ML EGI S L + CS+L A+ +G+Q H KS +D
Sbjct: 259 YVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCND 318
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK 540
V +S+I MY KCG + D+ K+F+ K + V +NAMI GYA HG A +A+ +F +
Sbjct: 319 VTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 541 NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLE 600
N + P+ +TF+A+L AC+HAG + + F M+ YK++P+ +HY+C+VD GRAG+LE
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 438
Query: 601 EAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYI 657
EA ++++ + + TLL ACR H N ++ E +A+K+++LN + A Y+ L+NIY
Sbjct: 439 EALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYA 498
Query: 658 EEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ +WE+ R++M ++ V K PG SW+
Sbjct: 499 SKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 183/393 (46%), Gaps = 20/393 (5%)
Query: 12 LISSHLRAGSVPKAFQLFNDMRVMDERPNEYTF-SVLLRACATPALWNVGLQIHGVLVRS 70
+I+ +R+G + A ++F+ MR N T+ S+L+ P+ Q+ +
Sbjct: 67 IIARCVRSGDIDGALRVFHGMRA----KNTITWNSLLIGISKDPSRMMEAHQLFDEIP-- 120
Query: 71 GLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRL 130
E D F+ + ++ Y N N A F + +D +WN MI+G+A+ G+ + L
Sbjct: 121 --EPDTFSYNIMLSCYVRN-VNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 131 FSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCG 190
F M E + + +S C L + +A G V +AM+ Y K
Sbjct: 178 FYSMMEKNEVSWN--AMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAK 231
Query: 191 DVSSCRKIFDSMEEKDNFV-WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTL 249
V +F M N V W+++ISGY N+R E+ + F+ M ++ ++P+ LSS L
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 250 RACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIV 309
C E+ L G Q+H + K+ ND + L+++Y G L DA KLF + KD+V
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Query: 310 AWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQ-IH 368
AWN+MI +AQ G + +++ L +E+ ++ T +A+L +C + + G
Sbjct: 352 AWNAMISGYAQHGN-ADKALCLFREM-IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 369 SLVMKSSVSHPTLVGNALVHMYSECGQIGDAFK 401
S+V V +V + G++ +A K
Sbjct: 410 SMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 442
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 174/365 (47%), Gaps = 19/365 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP ++ +W T+I+ + R G + KA +LF M M++ NE +++ ++
Sbjct: 150 MPFKDAASWNTMITGYARRGEMEKARELFYSM--MEK--NEVSWNAMISGYIECG----D 201
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL-LERDLVAWNVMISGFA 119
L+ + R A ++++ Y + A +F D+ + ++LV WN MISG+
Sbjct: 202 LEKASHFFKVAPVRGVVAWTAMITGYM-KAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 260
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDA 176
+ +LF M E EG++P++ S L CS L + QIH + SK D
Sbjct: 261 ENSRPEDGLKLFRAMLE-EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDV 319
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
++++ +Y KCG++ K+F+ M++KD W+++ISGY + ++A+ F++M
Sbjct: 320 TALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDN 379
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN---GHQNDCFVASVLLTLYANFGGL 293
+++PD + L AC +N G+ M+++ Q D + + ++ L G L
Sbjct: 380 KIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY--TCMVDLLGRAGKL 437
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
+A KL R + + A +L ++ + + ++L + S G +A +
Sbjct: 438 EEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIY 497
Query: 354 SCKNK 358
+ KN+
Sbjct: 498 ASKNR 502
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 236/437 (54%), Gaps = 10/437 (2%)
Query: 254 EIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNS 313
++ D + V V+G+M K + + +++L+ Y G L +A K+F + D+ + WN+
Sbjct: 6 KLGDFPSAVAVYGRMRKKNYMS----SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNA 61
Query: 314 MILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK 373
MI Q + + + L +E+H TL ++ + G+QIH +K
Sbjct: 62 MIAGLIQF-EFNEEGLSLFREMH-GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 374 SSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALEL 433
+ +V ++L HMY G++ D + ++ +W+++I QNG L L
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
K M G + +SSCS L G+Q H AIK G + V V SS+I MY+K
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 494 CGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF-TMLEKNGVTPNQVTFLA 552
CG + D+ K F + +EV++++MI Y HGQ +AIE+F TM E+ + N+V FL
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 553 MLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSE 612
+L ACSH+G + L LF +M+ KY KP +HY+C+VD GRAG L++A I++ +
Sbjct: 300 LLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 359
Query: 613 S---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCR 669
+ W+TLLSAC H N ++ ++ K++++++P+D A Y+LL+N++ +W + + R
Sbjct: 360 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVR 419
Query: 670 EKMAKTGVKKDPGSSWL 686
+ M VKK+ G SW
Sbjct: 420 KSMRDKNVKKEAGISWF 436
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 168/323 (52%), Gaps = 8/323 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R + TW +I+ ++ + LF +M + P+EYT + A ++G
Sbjct: 51 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG 110
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
QIHG ++ GLE D SSL +MY NG L+D V + R+LVAWN +I G AQ
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNG-KLQDGEIVIRSMPVRNLVAWNTLIMGNAQ 169
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL---GEVMQIHGLASKFGAETDAV 177
G V L+ +M ++ G +P+ TFV++L CS L G+ QIH A K GA +
Sbjct: 170 NGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 228
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ- 236
V S+++ +Y+KCG + K F E++D +WSS+IS Y + +G+EA+ F M +Q
Sbjct: 229 VVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT 288
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI-KNGHQNDCFVASVLLTLYANFGGLRD 295
++ ++ + L AC + G+++ M+ K G + + ++ L G L
Sbjct: 289 NMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQ 348
Query: 296 AEKLFRRIDDK-DIVAWNSMILA 317
AE + R + K DIV W +++ A
Sbjct: 349 AEAIIRSMPIKTDIVIWKTLLSA 371
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 149/308 (48%), Gaps = 12/308 (3%)
Query: 84 YMYSN---NG----SNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWE 136
YM SN NG +L +A VF ++ +R L WN MI+G Q LF EM
Sbjct: 25 YMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHG 84
Query: 137 VEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVS 193
+ G PD T S+ + L V QIHG K+G E D VV+S++ +Y + G +
Sbjct: 85 L-GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 194 SCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACV 253
+ SM ++ W+++I G N E ++ +K M +P++ + L +C
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 254 EIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNS 313
++ G Q+H + IK G + V S L+++Y+ G L DA K F +D+D V W+S
Sbjct: 204 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 263
Query: 314 MILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK 373
MI A+ GQG +++L + T+++I + +L +C + G ++ ++++
Sbjct: 264 MISAYGFHGQG-DEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE 322
Query: 374 SSVSHPTL 381
P L
Sbjct: 323 KYGFKPGL 330
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 262/513 (51%), Gaps = 36/513 (7%)
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
++ V++ + + ++ + F++ + + DQ L+A ++ L G+++H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 266 GQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGS 325
G K D FV + + +YA+ G + A +F + +D+V WN+MI + + G
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL-V 193
Query: 326 SRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNA 385
+ +L +E+ + +++ L I+ +C ++ R I+ ++++ V T + A
Sbjct: 194 DEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 386 LVHMY-------------------------------SECGQIGDAFKAFVDIVCKDDSSW 414
LV MY S+CG++ DA F KD W
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+++I Y ++ EAL + +EM GI S+ IS+C+ L ++ K H
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
+G ++ + +++I+MYAKCG ++ ++ VF+ + N V +++MI + HG+A A+ +
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
F +++ V PN+VTF+ +L CSH+G +E+ +F M +Y I P+ EHY C+VD +G
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 595 RAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYIL 651
RA L EA ++++ S W +L+SACR H ++G+ +AK+++EL P + +L
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVL 552
Query: 652 LSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+SNIY E +WE+ R+ R M + V K+ G S
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 222/513 (43%), Gaps = 77/513 (15%)
Query: 130 LFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETDAVVSSAMVDLY 186
LF + G + D +F+ +LK S L E M++HG+A K D V + +D+Y
Sbjct: 97 LFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMY 156
Query: 187 AKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLS 246
A CG ++ R +FD M +D W+++I Y +EA F++M V PD+ +L
Sbjct: 157 ASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216
Query: 247 STLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR----- 301
+ + AC ++ ++ +I+N + D + + L+T+YA G + A + FR
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 302 ----------------RIDD----------KDIVAWNSMILAHAQLGQGSSRSMQLLQEL 335
R+DD KD+V W +MI A+ + ++++ +E+
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVE-SDYPQEALRVFEEM 335
Query: 336 HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQ 395
+ ++ ++ +++ +C N L + +HS + + + + NAL++MY++CG
Sbjct: 336 C-CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 396 IGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS 455
+ F + ++ SWSS+I +G S+AL L M E + + +
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 456 CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIY 515
CS + GK+ +FA S+ D Y + P Y
Sbjct: 455 CSHSGLVEEGKK--IFA-------------SMTDEY---------------NITPKLEHY 484
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY 575
M+ + ++A+E+ +E V N V + +++SAC G +E L F
Sbjct: 485 GCMVDLFGRANLLREALEV---IESMPVASNVVIWGSLMSACRIHGELE--LGKFAA--- 536
Query: 576 KYKIKPESEHYSCLV---DAYGRAGRLEEAYQI 605
K ++ E +H LV + Y R R E+ I
Sbjct: 537 KRILELEPDHDGALVLMSNIYAREQRWEDVRNI 569
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 184/389 (47%), Gaps = 41/389 (10%)
Query: 17 LRAGSVPKAFQLF-NDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERD 75
L S P+A LF +R + R ++++F +L+A + + G+++HGV + D
Sbjct: 86 LSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCD 145
Query: 76 KFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMW 135
F + + MY++ G + A VF ++ RD+V WN MI + + G +LF EM
Sbjct: 146 PFVETGFMDMYASCG-RINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 136 EVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDA------------------- 176
+ + PD +++ C G M+ + +F E D
Sbjct: 205 D-SNVMPDEMILCNIVSACGRTGN-MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGC 262
Query: 177 ----------------VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVN 220
VS+AMV Y+KCG + + IFD E+KD W+++IS Y +
Sbjct: 263 MDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVES 322
Query: 221 NRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA 280
+ +EA+ F++MC +KPD + S + AC + L+ VH + NG +++ +
Sbjct: 323 DYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSIN 382
Query: 281 SVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTS 340
+ L+ +YA GGL +F ++ +++V+W+SMI A + G+ S ++ L + + +
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASD-ALSLFARM-KQEN 440
Query: 341 LQIQGATLIAILKSCKNKSDLPAGRQIHS 369
++ T + +L C + + G++I +
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 39/371 (10%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M HR+VVTW T+I + R G V +AF+LF +M+ + P+E ++ AC
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNG------------------------------ 90
I+ L+ + + D ++LV MY+ G
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 291
Query: 91 SNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSL 150
L DA +F ++DLV W MIS + + R+F EM G+KPD + S+
Sbjct: 292 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC-CSGIKPDVVSMFSV 350
Query: 151 LKCCSTLG---EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN 207
+ C+ LG + +H G E++ +++A++++YAKCG + + R +F+ M ++
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
WSS+I+ +++ +A+ F M ++ V+P++ L C + G ++
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 268 MIKNGHQNDCFV-ASVLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMILA---HAQLG 322
M + ++ L+ LR+A ++ + ++V W S++ A H +L
Sbjct: 471 MTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530
Query: 323 QGSSRSMQLLQ 333
G + ++L+
Sbjct: 531 LGKFAAKRILE 541
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/535 (27%), Positives = 276/535 (51%), Gaps = 11/535 (2%)
Query: 140 LKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIF 199
L P + ++ L+ C EV +IHG K G + D S ++ ++ D+ IF
Sbjct: 24 LSPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIF 82
Query: 200 DSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLN 259
+ + + F+++++I GY++++ E A F + + + D+ +TL++C ++
Sbjct: 83 EHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVS 142
Query: 260 TGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK-DIVAWNSMILAH 318
G +HG +++G + + L+ Y G + DA K+F + D V +++++ +
Sbjct: 143 IGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGY 202
Query: 319 AQLGQGSSRSMQL-LQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
Q+ S +++ L L + R + + + +TL++ L + + DL H L +K +
Sbjct: 203 LQV---SKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLD 259
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEM 437
+ AL+ MY + G I A + F + KD +W+ +I Y + G+ E + L ++M
Sbjct: 260 LDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQM 319
Query: 438 LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM 497
E + S + +SSC+ A VG+ + D +G++++DMYAK G +
Sbjct: 320 KYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLL 379
Query: 498 EDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG--VTPNQVTFLAMLS 555
E + ++F+ + + AMI GY HG A++A+ +F +E+ V PN++TFL +L+
Sbjct: 380 EKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLN 439
Query: 556 ACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSE 612
ACSH G + + + F M+ Y P+ EHY C+VD GRAG+LEEAY++++
Sbjct: 440 ACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDS 499
Query: 613 SAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARD 667
+AWR LL+ACR + N +GE ++ E+ + A ILL+ + G E++ D
Sbjct: 500 TAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLD 554
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/518 (25%), Positives = 249/518 (48%), Gaps = 20/518 (3%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
+IHG +V++GL++D FA S L+ S ++R A +F + +L +N MI G++
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLAFSSV--LDIRYASSIFEHVSNTNLFMFNTMIRGYSIS 103
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS-----TLGEVMQIHGLASKFGAETDA 176
+ +F+++ +GL D +F++ LK CS ++GE +HG+A + G
Sbjct: 104 DEPERAFSVFNQL-RAKGLTLDRFSFITTLKSCSRELCVSIGE--GLHGIALRSGFMVFT 160
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEK-DNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
+ +A++ Y CG +S RK+FD M + D +S++++GY ++ A+ F+ M K
Sbjct: 161 DLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRK 220
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
V + L S L A ++ DL+ H IK G D + + L+ +Y GG+
Sbjct: 221 SEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISS 280
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A ++F KD+V WN MI +A+ G + LL+++ + ++ +T + +L SC
Sbjct: 281 ARRIFDCAIRKDVVTWNCMIDQYAKTGL-LEECVWLLRQM-KYEKMKPNSSTFVGLLSSC 338
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
GR + L+ + ++ ++G ALV MY++ G + A + F + KD SW+
Sbjct: 339 AYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWT 398
Query: 416 SIIGTYKQNGMESEALELCKEMLAEG--ITFTSYSLPLCISSCSQLLAINVG-KQFHVFA 472
++I Y +G+ EA+ L +M E + + + +++CS + G + F
Sbjct: 399 AMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMV 458
Query: 473 IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNAMICGYAHHGQAKQA 531
+ V ++D+ + G +E++ ++ + + + + A++ +G A
Sbjct: 459 EAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLG 518
Query: 532 IEIFTMLEKNGVT-PNQVTFLAMLSACSHAGYIEDTLN 568
+ L + G T P LA A AG E +L+
Sbjct: 519 ESVMMRLAEMGETHPADAILLAGTHAV--AGNPEKSLD 554
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 194/431 (45%), Gaps = 16/431 (3%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N+ + T+I + + +AF +FN +R + ++F L++C+ ++G +H
Sbjct: 89 NLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLH 148
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER-DLVAWNVMISGFAQVGD 123
G+ +RSG ++L++ Y G + DA VF ++ + D V ++ +++G+ QV
Sbjct: 149 GIALRSGFMVFTDLRNALIHFYCVCG-KISDARKVFDEMPQSVDAVTFSTLMNGYLQVSK 207
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSS 180
+ LF M + E + + T +S L S LG++ H L K G + D + +
Sbjct: 208 KALALDLFRIMRKSE-VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLIT 266
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
A++ +Y K G +SS R+IFD KD W+ +I Y EE V + M +++KP
Sbjct: 267 ALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKP 326
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
+ L +C E G V + + D + + L+ +YA G L A ++F
Sbjct: 327 NSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIF 386
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
R+ DKD+ +W +MI + G + ++ T + +L +C +
Sbjct: 387 NRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGL 446
Query: 361 LPAG-----RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI-VCKDDSSW 414
+ G R + + V H V V + GQ+ +A++ ++ + D ++W
Sbjct: 447 VMEGIRCFKRMVEAYSFTPKVEHYGCV----VDLLGRAGQLEEAYELIRNLPITSDSTAW 502
Query: 415 SSIIGTYKQNG 425
+++ + G
Sbjct: 503 RALLAACRVYG 513
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 3 HRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQ 62
++VVTW +I + + G + + L M+ +PN TF LL +CA VG
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRT 349
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
+ +L + D G++LV MY+ G L A +F+ + ++D+ +W MISG+ G
Sbjct: 350 VADLLEEERIALDAILGTALVDMYAKVGL-LEKAVEIFNRMKDKDVKSWTAMISGYGAHG 408
Query: 123 DFCMVQRLFSEMWEVE-GLKPDNRTFVSLLKCCSTLGEVMQ 162
LF++M E ++P+ TF+ +L CS G VM+
Sbjct: 409 LAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVME 449
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 262/493 (53%), Gaps = 39/493 (7%)
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F ++ Q + PD L L++ + + G +VHG +K G + D +V++ L+ +YA
Sbjct: 33 LFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYA 92
Query: 289 NFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATL 348
+ G + K+F + +D+V+WN +I ++ G+ ++ + + + + ++L+ T+
Sbjct: 93 SLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED-AIGVFKRMSQESNLKFDEGTI 151
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECG-------------- 394
++ L +C +L G +I+ V+ + +GNALV M+ +CG
Sbjct: 152 VSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRD 210
Query: 395 -----------------QIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEM 437
+I +A F KD W++++ Y Q EALEL + M
Sbjct: 211 KNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCM 270
Query: 438 LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM 497
GI ++ L ++ C+Q A+ GK H + ++ D VG++++DMYAKCG +
Sbjct: 271 QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCI 330
Query: 498 EDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSAC 557
E + +VF + + + ++I G A +G + +A++++ +E GV + +TF+A+L+AC
Sbjct: 331 ETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTAC 390
Query: 558 SHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---- 613
+H G++ + +F M ++ ++P+SEH SCL+D RAG L+EA +++ K ES
Sbjct: 391 NHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETL 450
Query: 614 --AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREK 671
+ +LLSA RN+ N KI E+ A+K+ ++ SD +++ LL+++Y +WE+ + R K
Sbjct: 451 VPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRK 510
Query: 672 MAKTGVKKDPGSS 684
M G++K PG S
Sbjct: 511 MKDLGIRKFPGCS 523
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 204/430 (47%), Gaps = 39/430 (9%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+++ + ++ S S K LF ++R P+ +T V+L++ G ++H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
G V++GLE D + +SL+ MY++ G + VF ++ +RD+V+WN +IS + G F
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLG-KIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGA---ETDAVVSSA 181
+F M + LK D T VS L CS L ++I +F E + +A
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKN-LEIGERIYRFVVTEFEMSVRIGNA 187
Query: 182 MVDLYAKCGDVSSCRKIFDSMEE-------------------------------KDNFVW 210
+VD++ KCG + R +FDSM + KD +W
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
+++++GY NR +EA+ F+ M ++PD VL S L C + L G +HG + +
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 271 NGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQ 330
N D V + L+ +YA G + A ++F I ++D +W S+I A G S R++
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGM-SGRALD 366
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI-HSLVMKSSVSHPTLVGNALVHM 389
L E+ +++ T +A+L +C + + GR+I HS+ + +V + + L+ +
Sbjct: 367 LYYEME-NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 390 YSECGQIGDA 399
G + +A
Sbjct: 426 LCRAGLLDEA 435
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 167/348 (47%), Gaps = 42/348 (12%)
Query: 308 IVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI 367
++ +N M+ + A G+ ++ + L EL R L TL +LKS + G ++
Sbjct: 11 LLMYNKMLKSLAD-GKSFTKVLALFGEL-RGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 368 HSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGME 427
H +K+ + + V N+L+ MY+ G+I K F ++ +D SW+ +I +Y NG
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 428 SEALELCKEMLAE-GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSS 486
+A+ + K M E + F ++ +S+CS L + +G++ + F + + + V +G++
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNA 187
Query: 487 IIDMYAKCGHMEDSKKVFDAQVKPN-------------------------------EVIY 515
++DM+ KCG ++ ++ VFD+ N V++
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY 575
AM+ GY + +A+E+F ++ G+ P+ +++L+ C+ G +E +
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYIN 306
Query: 576 KYKIKPESEHYSCLVDAYGRAGRLEEA----YQIVQKDGSESAWRTLL 619
+ ++ + + LVD Y + G +E A Y+I ++D ++W +L+
Sbjct: 307 ENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERD--TASWTSLI 352
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 178/396 (44%), Gaps = 40/396 (10%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNV 59
MP R+VV+W LISS++ G A +F M + + + +E T L AC+ +
Sbjct: 107 MPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEI 166
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNG---------SNLRD--------------- 95
G +I+ +V + E G++LV M+ G ++RD
Sbjct: 167 GERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVS 225
Query: 96 ------ACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVS 149
A +F +D+V W M++G+ Q F LF M + G++PDN VS
Sbjct: 226 TGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCM-QTAGIRPDNFVLVS 284
Query: 150 LLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD 206
LL C+ G + Q IHG ++ D VV +A+VD+YAKCG + + ++F ++E+D
Sbjct: 285 LLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERD 344
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV-H 265
W+S+I G +N A+ + +M V+ D + L AC + G ++ H
Sbjct: 345 TASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFH 404
Query: 266 GQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRI---DDKDIVAWNSMILAHAQLG 322
++ Q S L+ L G L +AE+L ++ D+ +V +L+ A+
Sbjct: 405 SMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNY 464
Query: 323 QGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
+ ++ ++L + TL+A + + N+
Sbjct: 465 GNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANR 500
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 136/257 (52%), Gaps = 10/257 (3%)
Query: 428 SEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSI 487
++ L L E+ +G+ +++LP+ + S +L + G++ H +A+K+G D YV +S+
Sbjct: 28 TKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSL 87
Query: 488 IDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFT-MLEKNGVTPN 546
+ MYA G +E + KVFD + + V +N +I Y +G+ + AI +F M +++ + +
Sbjct: 88 MGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFD 147
Query: 547 QVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIV 606
+ T ++ LSACS +E ++ ++ ++++ + LVD + + G L++A +
Sbjct: 148 EGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARAVF 205
Query: 607 Q--KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNP-SDHASYILLSNIYIEEGKWE 663
+D + W +++ + +I E A+ + E +P D + + N Y++ +++
Sbjct: 206 DSMRDKNVKCWTSMVFGYV--STGRIDE--ARVLFERSPVKDVVLWTAMMNGYVQFNRFD 261
Query: 664 EARDCREKMAKTGVKKD 680
EA + M G++ D
Sbjct: 262 EALELFRCMQTAGIRPD 278
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 247/511 (48%), Gaps = 50/511 (9%)
Query: 216 GYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQN 275
G T NN G F ++ Q+ + ++SS + + +LN Q+HG +++ G
Sbjct: 29 GRTSNNSGT-----FSEISNQK----ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQ 79
Query: 276 DCFVASVLLTLYANFGGLRD--AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQ 333
C++ + L+ G D A ++ + ++ W ++I +A +G +
Sbjct: 80 SCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI--EGKFDEAIAMY 137
Query: 334 ELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSEC 393
R + T A+LK+C DL GRQ H+ + VGN ++ MY +C
Sbjct: 138 GCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKC 197
Query: 394 GQIGDAFKAFVDIVCKDDSSWSSIIGTY-------------------------------K 422
I A K F ++ +D SW+ +I Y
Sbjct: 198 ESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFA 257
Query: 423 QNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD-- 480
QN EALE M GI ++ IS+C+QL A + A KSGY+
Sbjct: 258 QNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDH 317
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF-TMLE 539
V +GS++IDMY+KCG++E++ VF + N Y++MI G A HG+A++A+ +F M+
Sbjct: 318 VVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVT 377
Query: 540 KNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRL 599
+ + PN VTF+ L ACSH+G ++ +F M + ++P +HY+C+VD GR GRL
Sbjct: 378 QTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRL 437
Query: 600 EEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIY 656
+EA ++++ E W LL ACR HNN +I E +A+ + EL P +YILLSN+Y
Sbjct: 438 QEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVY 497
Query: 657 IEEGKWEEARDCREKMAKTGVKKDPGSSWLI 687
G W R+ + + G+KK P SW++
Sbjct: 498 ASAGDWGGVLRVRKLIKEKGLKKTPAVSWVV 528
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 146/337 (43%), Gaps = 42/337 (12%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
RN WT +I + G +A ++ MR + P +TFS LL+AC T N+G Q
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 64 HGVLVR-SGL------------------------------ERDKFAGSSLVYMYSNNGSN 92
H R G ERD + + L+ Y+ G N
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVG-N 230
Query: 93 LRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK 152
+ A +F L +D+VAW M++GFAQ F M E G++ D T +
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRM-EKSGIRADEVTVAGYIS 289
Query: 153 CCSTLG------EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD 206
C+ LG +QI S + V+ SA++D+Y+KCG+V +F SM K+
Sbjct: 290 ACAQLGASKYADRAVQI-AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKN 348
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
F +SS+I G + R +EA+H F M Q +KP+ L AC ++ G QV
Sbjct: 349 VFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVF 408
Query: 266 GQMIKN-GHQNDCFVASVLLTLYANFGGLRDAEKLFR 301
M + G Q + ++ L G L++A +L +
Sbjct: 409 DSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIK 445
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 190/420 (45%), Gaps = 56/420 (13%)
Query: 146 TFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDV--SSCRKIFDSME 203
+ +S L C L ++ QIHG + G + + + ++ K G R++ + ++
Sbjct: 51 SLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQ 110
Query: 204 EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
++ F+W+++I GY + + +EA+ + M K+ + P S+ L+AC ++DLN G Q
Sbjct: 111 FRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 264 VHGQMIKNGHQNDCFVA---------------------------------SVLLTLYANF 290
H Q + + CFV + L+ YA
Sbjct: 171 FHAQTFR--LRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHR--TTSLQIQGATL 348
G + A +LF + KD+VAW +M+ AQ +++ + L+ R + ++ T+
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQ----NAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKS--SVSHPTLVGNALVHMYSECGQIGDAFKAFVDI 406
+ +C + + KS S S ++G+AL+ MYS+CG + +A F+ +
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 407 VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEG-ITFTSYSLPLCISSCSQLLAINVG 465
K+ ++SS+I +G EAL L M+ + I + + + +CS ++ G
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 466 KQ-----FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVKPNEVIYNAMI 519
+Q + F ++ +H + ++D+ + G ++++ ++ V+P+ ++ A++
Sbjct: 405 RQVFDSMYQTFGVQPTRDH----YTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 184/419 (43%), Gaps = 44/419 (10%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRD-ACCVFHDLLERDLVAWNVMISGFAQ 120
QIHG ++R GL++ + + L+ + G + A V + R+ W +I G+A
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
G F ++ M + E + P + TF +LLK C T+ ++ Q H +
Sbjct: 127 EGKFDEAIAMYGCMRK-EEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVY 185
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEE-------------------------------KD 206
V + M+D+Y KC + RK+FD M E KD
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKD 245
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEI---EDLNTGVQ 263
W+++++G+ N + +EA+ +F M K ++ D+ ++ + AC ++ + + VQ
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ 323
+ Q + + S L+ +Y+ G + +A +F +++K++ ++SMIL A G+
Sbjct: 306 I-AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 324 GSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG 383
+ ++ L + T ++ T + L +C + + GRQ+ + ++ PT
Sbjct: 365 -AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH 423
Query: 384 -NALVHMYSECGQIGDAFKAFVDI-VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
+V + G++ +A + + V W +++G + + E E+ E L E
Sbjct: 424 YTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN-NPEIAEIAAEHLFE 481
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 243/472 (51%), Gaps = 37/472 (7%)
Query: 249 LRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDI 308
L+ C L T +H ++K G C +A+ L+ +Y G A ++F + +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 309 VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIH 368
+AW S++ A Q S +++ + + ++ L+ A++K+C N + GRQ+H
Sbjct: 70 IAWASVLTALNQ-ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 369 SLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMES 428
+ S ++ +V ++LV MY++CG + A F I K+ SW++++ Y ++G +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 429 EALELCKEM---------------LAEGITFTSYSL-------------PLCISS----C 456
EALEL + + + G ++S+ PL +SS C
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 457 SQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYN 516
+ L A G+Q H I G++ V++ +++IDMYAKC + +K +F + V +
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
++I G A HGQA++A+ ++ + +GV PN+VTF+ ++ ACSH G++E LF M
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEK 633
Y I+P +HY+CL+D GR+G L+EA ++ E W LLSAC+ ++G +
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 634 SAKKMI-ELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
A ++ D ++YILLSNIY W + + R K+ + V+KDPG S
Sbjct: 429 IADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 188/424 (44%), Gaps = 36/424 (8%)
Query: 147 FVSLLKCCS---TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
++ L+ C+ TL +H K G +++ +V++Y KCG S ++FD M
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 204 EKDNFVWSSIISGYT-VNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGV 262
+D+ W+S+++ N G+ F ++PD V S+ ++AC + ++ G
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
QVH I + + ND V S L+ +YA G L A+ +F I K+ ++W +M+ +A+ G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 323 QGSS------------------------------RSMQLLQELHRTTSLQIQGATLIAIL 352
+ + + E+ R + L +I+
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS 412
+C N + AGRQ+H LV+ + NAL+ MY++C + A F + +D
Sbjct: 246 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVF 471
SW+S+I Q+G +AL L +M++ G+ + I +CS + + G++ F
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQAKQ 530
G + + ++D+ + G +++++ + P+E + A++ G+ +
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 425
Query: 531 AIEI 534
I I
Sbjct: 426 GIRI 429
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 201/417 (48%), Gaps = 44/417 (10%)
Query: 48 LRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERD 107
L+ CA +H +V+ G+ + ++LV +Y G+ A VF ++ RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAA-SHALQVFDEMPHRD 68
Query: 108 LVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV-----MQ 162
+AW +++ Q +FS + GL+PD+ F +L+K C+ LG + +
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 163 IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNR 222
H + S++ D VV S++VD+YAKCG ++S + +FDS+ K+ W++++SGY + R
Sbjct: 129 CHFIVSEYA--NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 223 GEEAVHFFK-------------------------------DMCKQRVKP-DQHVLSSTLR 250
EEA+ F+ +M ++RV D VLSS +
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 251 ACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA 310
AC + G QVHG +I G + F+++ L+ +YA + A+ +F R+ +D+V+
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 311 WNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSL 370
W S+I+ AQ GQ + +++ L ++ + ++ T + ++ +C + + GR++
Sbjct: 307 WTSLIVGMAQHGQ-AEKALALYDDM-VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQS 364
Query: 371 VMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDI-VCKDDSSWSSIIGTYKQNG 425
+ K P+L L+ + G + +A + D+ +W++++ K+ G
Sbjct: 365 MTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 421
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 165/360 (45%), Gaps = 36/360 (10%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
MPHR+ + W +++++ +A K +F+ + RP+++ FS L++ACA +
Sbjct: 64 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNG---------SNLR---------------- 94
G Q+H + S D+ SSLV MY+ G ++R
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 95 -----DACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVS 149
+A +F L ++L +W +ISGF Q G +F+EM D S
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 150 LLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD 206
++ C+ L + Q+HGL G ++ +S+A++D+YAKC DV + + IF M +D
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHG 266
W+S+I G + + E+A+ + DM VKP++ + AC + + G ++
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 267 QMIKN-GHQNDCFVASVLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMILAHAQLGQG 324
M K+ G + + LL L G L +AE L + D W +++ A + G+G
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 14/261 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERP---NEYTFSVLLRACATPALW 57
+P +N+ +WT LIS +++G +AF +F +MR ER + S ++ ACA A
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR--RERVDILDPLVLSSIVGACANLAAS 254
Query: 58 NVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISG 117
G Q+HG+++ G + F ++L+ MY+ S++ A +F + RD+V+W +I G
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYA-KCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAE 173
AQ G L+ +M G+KP+ TFV L+ CS +G V + + +G
Sbjct: 314 MAQHGQAEKALALYDDMVS-HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGEEAVHFFKD 232
+ ++DL + G + + +M D W++++S RG+ +
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 233 MCKQ-RVK-PDQHVLSSTLRA 251
+ ++K P ++L S + A
Sbjct: 433 LVSSFKLKDPSTYILLSNIYA 453
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 277/558 (49%), Gaps = 60/558 (10%)
Query: 141 KPDNRTFVSLLKCCSTLGEVMQIH------GLASKFGAETDAVVSSAMVDLYAKCGDVSS 194
+ NR L + C + + QIH GL S + + S+++ + G +
Sbjct: 9 RTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASL----SVPGALKY 64
Query: 195 CRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVE 254
K+FD + + D + + ++ G + + E+ V + +M K+ V PD++ + L+AC +
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSM 314
+E + G HG+++++G + +V + L+ +AN G L A +LF VAW+SM
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSM 184
Query: 315 ILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS 374
+A+ G+ +M+L E+ P Q+
Sbjct: 185 TSGYAKRGK-IDEAMRLFDEM--------------------------PYKDQV------- 210
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELC 434
N ++ +C ++ A + F KD +W+++I Y G EAL +
Sbjct: 211 -------AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIF 263
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSG-YNHDVYVGSSI----ID 489
KEM G ++ +S+C+ L + GK+ H++ +++ + +YVG+ I ID
Sbjct: 264 KEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALID 323
Query: 490 MYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVT 549
MYAKCG ++ + +VF + +N +I G A H A+ +IE+F +++ V PN+VT
Sbjct: 324 MYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVT 382
Query: 550 FLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKD 609
F+ ++ ACSH+G +++ F+LM Y I+P +HY C+VD GRAG+LEEA+ V+
Sbjct: 383 FIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM 442
Query: 610 GSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEAR 666
E WRTLL AC+ + N ++G+ + +K++ + + Y+LLSNIY G+W+ +
Sbjct: 443 KIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQ 502
Query: 667 DCREKMAKTGVKKDPGSS 684
R+ T VKK G S
Sbjct: 503 KVRKMFDDTRVKKPTGVS 520
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 193/426 (45%), Gaps = 55/426 (12%)
Query: 13 ISSHLRAGSV-----PKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
I +H+ GS K L+ +M P+ YTF+ +L+AC+ + G HG +
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMV 127
VR G +++ ++L+ ++N G +L A +F D + VAW+ M SG+A+ G
Sbjct: 139 VRHGFVLNEYVKNALILFHANCG-DLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 128 QRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYA 187
RLF EM D V + M+
Sbjct: 198 MRLFDEM-------------------------------------PYKDQVAWNVMITGCL 220
Query: 188 KCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSS 247
KC ++ S R++FD EKD W+++ISGY +EA+ FK+M PD + S
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 248 TLRACVEIEDLNTGVQVHGQMIKNGHQNDCF-----VASVLLTLYANFGGLRDAEKLFRR 302
L AC + DL TG ++H +++ + + + L+ +YA G + A ++FR
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 303 IDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLP 362
+ D+D+ WN++I+ A + S+++ +E+ R + T I ++ +C + +
Sbjct: 341 VKDRDLSTWNTLIVGLAL--HHAEGSIEMFEEMQR-LKVWPNEVTFIGVILACSHSGRVD 397
Query: 363 AGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDSS--WSSIIG 419
GR+ SL+ P + +V M GQ+ +AF FV+ + + ++ W +++G
Sbjct: 398 EGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAF-MFVESMKIEPNAIVWRTLLG 456
Query: 420 TYKQNG 425
K G
Sbjct: 457 ACKIYG 462
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/567 (23%), Positives = 241/567 (42%), Gaps = 93/567 (16%)
Query: 54 PALW----NVGL--QIHGVLVRSGLERDKFAGSSLVYMYS-NNGSNLRDACCVFHDLLER 106
P LW N+ QIH +V +GL + L+Y S + L+ A +F ++ +
Sbjct: 16 PKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKP 75
Query: 107 DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL---GEVMQI 163
D+ N ++ G AQ L++EM E G+ PD TF +LK CS L
Sbjct: 76 DVSICNHVLRGSAQSMKPEKTVSLYTEM-EKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 164 HGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRG 223
HG + G + V +A++ +A CGD+ ++FD + WSS+ SGY +
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 224 EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL 283
+EA+ F +M + DQ + + C++ +++++
Sbjct: 195 DEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDS----------------------- 227
Query: 284 LTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI 343
A +LF R +KD+V WN+MI + G ++ + +E+ R
Sbjct: 228 ------------ARELFDRFTEKDVVTWNAMISGYVNCGY-PKEALGIFKEM-RDAGEHP 273
Query: 344 QGATLIAILKSCKNKSDLPAGRQIHSLVMKS-SVSHPTLVG----NALVHMYSECGQIGD 398
T++++L +C DL G+++H ++++ SVS VG NAL+ MY++CG I
Sbjct: 274 DVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDR 333
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
A + F + +D S+W+++I + E ++E+ +EM + + I +CS
Sbjct: 334 AIEVFRGVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSH 392
Query: 459 LLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAM 518
++ G+++ S + DMY ++PN Y M
Sbjct: 393 SGRVDEGRKYF---------------SLMRDMY---------------NIEPNIKHYGCM 422
Query: 519 ICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYK 578
+ GQ ++A F +E + PN + + +L AC G +E L +
Sbjct: 423 VDMLGRAGQLEEA---FMFVESMKIEPNAIVWRTLLGACKIYGNVE--LGKYANEKLLSM 477
Query: 579 IKPESEHYSCLVDAYGRAGRLEEAYQI 605
K ES Y L + Y G+ + ++
Sbjct: 478 RKDESGDYVLLSNIYASTGQWDGVQKV 504
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 52/255 (20%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGV 66
V W+++ S + + G + +A +LF++M D+ WNV I G
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQ-----------------VAWNV--MITGC 219
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCM 126
L + A +F E+D+V WN MISG+ G
Sbjct: 220 L---------------------KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 127 VQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS------ 180
+F EM + G PD T +SLL C+ LG+ ++ + ET +V SS
Sbjct: 259 ALGIFKEMRDA-GEHPDVVTILSLLSACAVLGD-LETGKRLHIYILETASVSSSIYVGTP 316
Query: 181 ---AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
A++D+YAKCG + ++F ++++D W+++I G +++ E ++ F++M + +
Sbjct: 317 IWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLK 375
Query: 238 VKPDQHVLSSTLRAC 252
V P++ + AC
Sbjct: 376 VWPNEVTFIGVILAC 390
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
++VVTW +IS ++ G +A +F +MR E P+ T LL ACA G ++
Sbjct: 238 KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
Query: 64 H-GVLVRSGLERDKFAGS----SLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGF 118
H +L + + + G+ +L+ MY+ GS R A VF + +RDL WN +I G
Sbjct: 298 HIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDR-AIEVFRGVKDRDLSTWNTLIVGL 356
Query: 119 A------QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLAS 168
A + F +QRL ++W P+ TF+ ++ CS G V + +
Sbjct: 357 ALHHAEGSIEMFEEMQRL--KVW------PNEVTFIGVILACSHSGRVDEGRKYFSLMRD 408
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSII 214
+ E + MVD+ + G + +SM+ E + VW +++
Sbjct: 409 MYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL 455
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 244/457 (53%), Gaps = 16/457 (3%)
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+V + + +RA ++ L QVH +I G+ + + L+TL + +
Sbjct: 4 KVAANSAAYEAIVRAGPRVKQLQ---QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYT 60
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA--TLIAILKS 354
LF + D +NS+I + ++L + + R S + + T +++KS
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKSTSKL----RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKS 116
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
C + S L G+ +H + S T V ALV YS+CG + A + F + K +W
Sbjct: 117 CADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAW 176
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
+S++ ++QNG+ EA+++ +M G S + +S+C+Q A+++G H + I
Sbjct: 177 NSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIIS 236
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
G + +V +G+++I++Y++CG + +++VFD + N + AMI Y HG +QA+E+
Sbjct: 237 EGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVEL 296
Query: 535 FTMLEKN-GVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAY 593
F +E + G PN VTF+A+LSAC+HAG +E+ +++ M Y++ P EH+ C+VD
Sbjct: 297 FNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDML 356
Query: 594 GRAGRLEEAYQIVQ------KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHA 647
GRAG L+EAY+ + K + + W +L AC+ H N +G + AK++I L P +
Sbjct: 357 GRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPG 416
Query: 648 SYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+++LSNIY GK +E R+ M + ++K G S
Sbjct: 417 HHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYS 453
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 155/310 (50%), Gaps = 13/310 (4%)
Query: 140 LKPDNRTFVSLLKCCSTL-----GEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSS 194
+ P N TF S++K C+ L G+ + H + S FG D V +A+V Y+KCGD+
Sbjct: 103 VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG--LDTYVQAALVTFYSKCGDMEG 160
Query: 195 CRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVE 254
R++FD M EK W+S++SG+ N +EA+ F M + +PD S L AC +
Sbjct: 161 ARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQ 220
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSM 314
++ G VH +I G + + + L+ LY+ G + A ++F ++ + ++ AW +M
Sbjct: 221 TGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAM 280
Query: 315 ILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS 374
I A+ G G ++++L ++ T +A+L +C + + GR ++ + KS
Sbjct: 281 ISAYGTHGYG-QQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Query: 375 SVSHPTLVGNA-LVHMYSECGQIGDAFKAF--VDIVCKDDSS--WSSIIGTYKQNGMESE 429
P + + +V M G + +A+K +D K + W++++G K +
Sbjct: 340 YRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDL 399
Query: 430 ALELCKEMLA 439
+E+ K ++A
Sbjct: 400 GVEIAKRLIA 409
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 128/239 (53%), Gaps = 10/239 (4%)
Query: 39 PNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACC 98
P+ YTF+ ++++CA + +G +H V SG D + ++LV YS G ++ A
Sbjct: 105 PSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCG-DMEGARQ 163
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG 158
VF + E+ +VAWN ++SGF Q G ++F +M E G +PD+ TFVSLL C+ G
Sbjct: 164 VFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE-SGFEPDSATFVSLLSACAQTG 222
Query: 159 EVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIIS 215
V +H G + + + +A+++LY++CGDV R++FD M+E + W+++IS
Sbjct: 223 AVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMIS 282
Query: 216 GYTVNNRGEEAVHFFKDM---CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
Y + G++AV F M C P+ + L AC + G V+ +M K+
Sbjct: 283 AYGTHGYGQQAVELFNKMEDDCGP--IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 189/407 (46%), Gaps = 26/407 (6%)
Query: 143 DNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSM 202
++ + ++++ + ++ Q+H G + + ++ L ++ +F S+
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSV 67
Query: 203 EEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGV 262
D+F+++S+I + V +++ M V P + +S +++C ++ L G
Sbjct: 68 PLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGK 127
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
VH + +G D +V + L+T Y+ G + A ++F R+ +K IVAWNS++ Q G
Sbjct: 128 GVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNG 187
Query: 323 QGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLV 382
+ ++Q+ ++ R + + AT +++L +C + G +H ++ + +
Sbjct: 188 L-ADEAIQVFYQM-RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKL 245
Query: 383 GNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEM----- 437
G AL+++YS CG +G A + F + + ++W+++I Y +G +A+EL +M
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG 305
Query: 438 -LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS-----GYNHDVYVGSSIIDMY 491
+ +TF + +S+C+ + G+ + KS G H V ++DM
Sbjct: 306 PIPNNVTFVA-----VLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDML 356
Query: 492 AKCGHMEDSKKV---FDAQVKPN-EVIYNAMICGYAHHGQAKQAIEI 534
+ G ++++ K DA K ++ AM+ H +EI
Sbjct: 357 GRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEI 403
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 10/260 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP +++V W +L+S + G +A Q+F MR P+ TF LL ACA ++G
Sbjct: 168 MPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLG 227
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+H ++ GL+ + G++L+ +YS G ++ A VF + E ++ AW MIS +
Sbjct: 228 SWVHQYIISEGLDLNVKLGTALINLYSRCG-DVGKAREVFDKMKETNVAAWTAMISAYGT 286
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS- 179
G LF++M + G P+N TFV++L C+ G V + + + +
Sbjct: 287 HGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGV 346
Query: 180 ---SAMVDLYAKCGDVSSCRKIFDSMEEKDN----FVWSSIISGYTVNNRGEEAVHFFKD 232
MVD+ + G + K ++ +W++++ ++ + V K
Sbjct: 347 EHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKR 406
Query: 233 MCK-QRVKPDQHVLSSTLRA 251
+ + P HV+ S + A
Sbjct: 407 LIALEPDNPGHHVMLSNIYA 426
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 288/602 (47%), Gaps = 99/602 (16%)
Query: 95 DACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
+A +F L ERD+V W +I+G+ ++GD + LF
Sbjct: 64 EARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD---------------------- 101
Query: 155 STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSII 214
+ + + V +AMV Y + +S +F M E++ W+++I
Sbjct: 102 --------------RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMI 147
Query: 215 SGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLS--STLRACVEIEDLNTGVQVHGQMIKNG 272
GY + R ++A+ F +M P+++++S S ++A V+ ++ + + +M +
Sbjct: 148 DGYAQSGRIDKALELFDEM------PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR- 200
Query: 273 HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLL 332
D + ++ A G + +A +LF + +++I++WN+MI +AQ
Sbjct: 201 ---DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQ------------ 245
Query: 333 QELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVH--MY 390
N+ D A + + + S T++ + + M
Sbjct: 246 -----------------------NNRID-EADQLFQVMPERDFASWNTMITGFIRNREMN 281
Query: 391 SECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLP 450
CG F + K+ SW+++I Y +N EAL + +ML +G +
Sbjct: 282 KACG-------LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 451 LCI-SSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQV- 508
+ I S+CS L + G+Q H KS + + V S++++MY+K G + ++K+FD +
Sbjct: 335 VSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV 394
Query: 509 -KPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTL 567
+ + + +N+MI YAHHG K+AIE++ + K+G P+ VT+L +L ACSHAG +E +
Sbjct: 395 CQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGM 454
Query: 568 NLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDG---SESAWRTLLSACRN 624
F ++ + EHY+CLVD GRAGRL++ + D S S + +LSAC
Sbjct: 455 EFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNV 514
Query: 625 HNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
HN I ++ KK++E D +Y+L+SNIY GK EEA + R KM + G+KK PG S
Sbjct: 515 HNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCS 574
Query: 685 WL 686
W+
Sbjct: 575 WV 576
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/548 (24%), Positives = 249/548 (45%), Gaps = 93/548 (16%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P R+VVTWT +I+ +++ G + +A +LF+ + D R N T++ ++
Sbjct: 72 LPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMV------------ 116
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
SG R K L A +F ++ ER++V+WN MI G+AQ
Sbjct: 117 ---------SGYLRSK---------------QLSIAEMLFQEMPERNVVSWNTMIDGYAQ 152
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G LF EM E + ++ S++K G + + L + D V +
Sbjct: 153 SGRIDKALELFDEMPERNIV-----SWNSMVKALVQRGRIDEAMNLFERM-PRRDVVSWT 206
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
AMVD AK G V R++FD M E++ W+++I+GY NNR +EA F+ V P
Sbjct: 207 AMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQ------VMP 260
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
++ S NT + I+N N A LF
Sbjct: 261 ERDFAS-----------WNTMIT---GFIRNREMNK-------------------ACGLF 287
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
R+ +K++++W +MI + + + + ++ + ++ R S++ T ++IL +C + +
Sbjct: 288 DRMPEKNVISWTTMITGYVE-NKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG 346
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVD-IVCKDD-SSWSSII 418
L G+QIH L+ KS +V +AL++MYS+ G++ A K F + +VC+ D SW+S+I
Sbjct: 347 LVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 406
Query: 419 GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS--- 475
Y +G EA+E+ +M G ++ + + +CS + G +F ++
Sbjct: 407 AVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESL 466
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA-QVKPNEVIYNAMICGYAHHGQAKQAIEI 534
+ Y + ++D+ + G ++D + + + Y A++ H + A E+
Sbjct: 467 PLREEHY--TCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEV 524
Query: 535 FTMLEKNG 542
+ + G
Sbjct: 525 VKKVLETG 532
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 142/324 (43%), Gaps = 30/324 (9%)
Query: 365 RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQN 424
R I+S + V P L+ + G+I +A K F + +D +W+ +I Y +
Sbjct: 35 RSIYSSSSRPRVPQPEW----LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKL 90
Query: 425 GMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVG 484
G EA EL + + T ++ QL + +V
Sbjct: 91 GDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQL-------SIAEMLFQEMPERNVVSW 143
Query: 485 SSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVT 544
+++ID YA+ G ++ + ++FD + N V +N+M+ G+ +A+ +F + + V
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV- 202
Query: 545 PNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQ 604
V++ AM+ + G +++ LF M + I ++ ++ Y + R++EA Q
Sbjct: 203 ---VSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQ 254
Query: 605 IVQ--KDGSESAWRTLLSA-CRNHNNTKIGEKSAKKMIELNPSDHA-SYILLSNIYIEEG 660
+ Q + ++W T+++ RN K A + + P + S+ + Y+E
Sbjct: 255 LFQVMPERDFASWNTMITGFIRNREMNK-----ACGLFDRMPEKNVISWTTMITGYVENK 309
Query: 661 KWEEARDCREKMAKTG-VKKDPGS 683
+ EEA + KM + G VK + G+
Sbjct: 310 ENEEALNVFSKMLRDGSVKPNVGT 333
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 236/433 (54%), Gaps = 12/433 (2%)
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ 323
+H +K G +D F + L+ Y + A KLF + + ++V+W S+I + +G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 324 GSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG 383
+ ++ + Q++H + T ++ K+C ++ G+ IH+ + S + +V
Sbjct: 111 PQN-ALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 384 NALVHMYSECGQIGDAFKAFVDIVC--KDDSSWSSIIGTYKQNGMESEALELCKEMLAEG 441
++LV MY +C + A + F ++ ++ SW+S+I Y QN EA+EL + A
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 442 IT--FTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMED 499
+ + L IS+CS L + GK H + GY + V +S++DMYAKCG +
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 500 SKKVFDAQVKPNEVI-YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACS 558
++K+F +++ + VI Y +MI A HG + A+++F + + PN VT L +L ACS
Sbjct: 290 AEKIF-LRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 559 HAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ--KDGSESA-- 614
H+G + + L +LM KY + P+S HY+C+VD GR GR++EAY++ + + G+E
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGAL 408
Query: 615 -WRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMA 673
W LLSA R H +I +++K++I+ N ++YI LSN Y G WE++ R +M
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
Query: 674 KTGVKKDPGSSWL 686
++G K+ SW+
Sbjct: 469 RSGNVKERACSWI 481
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 195/400 (48%), Gaps = 14/400 (3%)
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
+H + ++ G D F + LV Y + A +F ++ E ++V+W +ISG+ +G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKL-KEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVS 179
+F +M E + P+ TF S+ K CS L E IH G + VVS
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 180 SAMVDLYAKCGDVSSCRKIFDSM--EEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
S++VD+Y KC DV + R++FDSM ++ W+S+I+ Y N RG EA+ F+
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 238 V--KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+ +Q +L+S + AC + L G HG + + G++++ VA+ LL +YA G L
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
AEK+F RI ++++ SMI+A A+ G G + +++L E+ + TL+ +L +C
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEA-AVKLFDEM-VAGRINPNYVTLLGVLHAC 347
Query: 356 KNKSDLPAGRQIHSLVM-KSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS- 413
+ + G + SL+ K V + +V M G++ +A++ I +
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGA 407
Query: 414 --WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL 451
W +++ + +G E K ++ TS + L
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIAL 447
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 214/418 (51%), Gaps = 16/418 (3%)
Query: 163 IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNR 222
+H L K G +D + +V Y K ++++ RK+FD M E + W+S+ISGY +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 223 GEEAVHFFKDMCKQR-VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVAS 281
+ A+ F+ M + R V P+++ +S +AC + + G +H ++ +G + + V+S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 282 VLLTLYANFGGLRDAEKLFRRI--DDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT- 338
L+ +Y + A ++F + +++V+W SMI A+AQ +G +++L + +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARG-HEAIELFRSFNAAL 229
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
TS + L +++ +C + L G+ H LV + T+V +L+ MY++CG +
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
A K F+ I C S++S+I ++G+ A++L EM+A I +L + +CS
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 459 LLAINVGKQF-HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS---KKVFDAQVKPNEVI 514
+N G ++ + A K G D + ++DM + G ++++ K + + ++
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 515 YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPN-QVT--FLAMLSACSHAGYIEDTLNL 569
+ A++ HG+ +EI + K + N QVT ++A+ +A + +G ED+ +L
Sbjct: 410 WGALLSAGRLHGR----VEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESL 463
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 180/367 (49%), Gaps = 19/367 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERP---NEYTFSVLLRACATPALW 57
M NVV+WT++IS + G A +F M ++RP NEYTF+ + +AC+ A
Sbjct: 90 MCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH--EDRPVPPNEYTFASVFKACSALAES 147
Query: 58 NVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE--RDLVAWNVMI 115
+G IH L SGL R+ SSLV MY +++ A VF ++ R++V+W MI
Sbjct: 148 RIGKNIHARLEISGLRRNIVVSSSLVDMY-GKCNDVETARRVFDSMIGYGRNVVSWTSMI 206
Query: 116 SGFAQVGDFCMVQRLFSEM-WEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFG 171
+ +AQ LF + + + S++ CS+LG + HGL ++ G
Sbjct: 207 TAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGG 266
Query: 172 AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFK 231
E++ VV+++++D+YAKCG +S KIF + ++S+I + GE AV F
Sbjct: 267 YESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFD 326
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI-KNGHQNDCFVASVLLTLYANF 290
+M R+ P+ L L AC +N G++ M K G D + ++ + F
Sbjct: 327 EMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRF 386
Query: 291 GGLRDAEKLFRRID---DKDIVAWNSMILA---HAQLGQGSSRSMQLLQELHRTTSLQIQ 344
G + +A +L + I+ ++ + W +++ A H ++ S S +L+Q + TS I
Sbjct: 387 GRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIA 446
Query: 345 GATLIAI 351
+ A+
Sbjct: 447 LSNAYAV 453
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 255/493 (51%), Gaps = 10/493 (2%)
Query: 200 DSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM---CKQRVKPDQHVLSSTLRACVEIE 256
D+ K S I + NR EA F+ + C +V + + + AC+ ++
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTY--DALVEACIRLK 137
Query: 257 DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMIL 316
+ +V+G M+ NG + + ++ + +L ++ G + DA +LF I ++++ ++ S+I
Sbjct: 138 SIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIIS 197
Query: 317 AHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSV 376
G + +L + + S + T +L++ + G+Q+H +K V
Sbjct: 198 GFVNFGN-YVEAFELFKMMWEELS-DCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGV 255
Query: 377 SHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKE 436
T V L+ MYS+CG I DA AF + K +W+++I Y +G EAL L +
Sbjct: 256 VDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYD 315
Query: 437 MLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGH 496
M G++ ++L + I ++L + + KQ H I++G+ ++ ++++D Y+K G
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGR 375
Query: 497 MEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSA 556
++ ++ VFD + N + +NA++ GYA+HG+ A+++F + V PN VTFLA+LSA
Sbjct: 376 VDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSA 435
Query: 557 CSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESA-- 614
C+++G E +F M + IKP + HY+C+++ GR G L+EA +++ ++
Sbjct: 436 CAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVN 495
Query: 615 -WRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMA 673
W LL+ACR N ++G A+K+ + P +Y+++ N+Y GK EA E +
Sbjct: 496 MWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLE 555
Query: 674 KTGVKKDPGSSWL 686
G+ P +W+
Sbjct: 556 SKGLSMMPACTWV 568
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 182/353 (51%), Gaps = 8/353 (2%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVM-DERPNEYTFSVLLRACATPALWNVGLQIHG 65
VT + I + +AF+LF + + + T+ L+ AC +++G
Sbjct: 88 VTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYG 147
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFC 125
++ +G E +++ + ++ M+ G + DA +F ++ ER+L ++ +ISGF G++
Sbjct: 148 FMMSNGFEPEQYMMNRILLMHVKCGMII-DARRLFDEIPERNLYSYYSIISGFVNFGNYV 206
Query: 126 MVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAM 182
LF MWE E + TF +L+ + LG + Q+H A K G + VS +
Sbjct: 207 EAFELFKMMWE-ELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGL 265
Query: 183 VDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQ 242
+D+Y+KCGD+ R F+ M EK W+++I+GY ++ EEA+ DM V DQ
Sbjct: 266 IDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQ 325
Query: 243 HVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRR 302
LS +R ++ L Q H +I+NG +++ + L+ Y+ +G + A +F +
Sbjct: 326 FTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDK 385
Query: 303 IDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
+ K+I++WN+++ +A G+G+ +++L +++ ++ T +A+L +C
Sbjct: 386 LPRKNIISWNALMGGYANHGRGTD-AVKLFEKMI-AANVAPNHVTFLAVLSAC 436
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 185/398 (46%), Gaps = 30/398 (7%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P RN+ ++ ++IS + G+ +AF+LF M +TF+V+LRA A VG
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+H ++ G+ + F L+ MYS G ++ DA C F + E+ VAWN +I+G+A
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCG-DIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
G L +M + G+ D T +++ + L ++ Q H + G E++ V
Sbjct: 303 HGYSEEALCLLYDMRD-SGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIV 361
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
++A+VD Y+K G V + R +FD + K+ W++++ GY + RG +AV F+ M
Sbjct: 362 ANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAAN 421
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK-NGHQNDCFVASVLLTLYANFGGLRDA 296
V P+ + L AC G ++ M + +G + + ++ L G L +A
Sbjct: 422 VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEA 481
Query: 297 EKLFRRIDDKDIV-AWNSM--------------ILAHAQLGQGSSR--SMQLLQELHRTT 339
RR K V W ++ ++A G G + + ++ ++ +
Sbjct: 482 IAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSM 541
Query: 340 SLQIQGATLIAILKSCKNKSDLPA------GRQIHSLV 371
+ A ++ L+S K S +PA G Q HS +
Sbjct: 542 GKTAEAAGVLETLES-KGLSMMPACTWVEVGDQTHSFL 578
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 244/495 (49%), Gaps = 56/495 (11%)
Query: 245 LSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA----NFGGLRDAEKLF 300
L + C I DL+ Q+H IK+G D A+ +L A + L A K+F
Sbjct: 26 LFPQINNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSR-SMQLLQELHRTTSLQIQGATLIAILKSCKNKS 359
++ ++ +WN++I ++ + + ++ L E+ ++ T ++LK+C
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 360 DLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFV------DIVCKDDS- 412
+ G+QIH L +K V + LV MY CG + DA F D+V D
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 413 --------------------------------------SWSSIIGTYKQNGMESEALELC 434
SW+++I Y NG +A+E+
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKC 494
+EM I +L + + S+L ++ +G+ H++A SG D +GS++IDMY+KC
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 495 GHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAML 554
G +E + VF+ + N + ++AMI G+A HGQA AI+ F + + GV P+ V ++ +L
Sbjct: 323 GIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 382
Query: 555 SACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGS 611
+ACSH G +E+ F+ M+ ++P EHY C+VD GR+G L+EA + +
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPD 442
Query: 612 ESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREK 671
+ W+ LL ACR N ++G++ A ++++ P D +Y+ LSN+Y +G W E + R +
Sbjct: 443 DVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLR 502
Query: 672 MAKTGVKKDPGSSWL 686
M + ++KDPG S +
Sbjct: 503 MKEKDIRKDPGCSLI 517
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 191/419 (45%), Gaps = 57/419 (13%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRD---ACCVFHDLLERDLVAWNVMISGF 118
QIH V ++SG RD A + ++ + + + RD A +F+ + +R+ +WN +I GF
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 119 AQVGD--FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAE 173
++ + + LF EM E ++P+ TF S+LK C+ G++ QIHGLA K+G
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 174 TDAVVSSAMVDLYAKCG------------------------------------------- 190
D V S +V +Y CG
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 191 --DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSST 248
D + R +FD M ++ W+++ISGY++N ++AV F++M K ++P+ L S
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 249 LRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDI 308
L A + L G +H +G + D + S L+ +Y+ G + A +F R+ +++
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV 340
Query: 309 VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIH 368
+ W++MI A GQ ++ ++ R ++ I +L +C + + GR+
Sbjct: 341 ITWSAMINGFAIHGQAGD-AIDCFCKM-RQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 369 SLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCK-DDSSWSSIIGTYKQNG 425
S ++ P + +V + G + +A + +++ K DD W +++G + G
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 200/439 (45%), Gaps = 56/439 (12%)
Query: 154 CSTLGEVMQIHGLASKFGAETDAVVSSAMV------DLYAKCGDVSSCRKIFDSMEEKDN 207
C T+ ++ QIH + K G D + ++ ++ DL+ + D+ KIF+ M +++
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNC 90
Query: 208 FVWSSIISGYTVNNRGEEAVH---FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
F W++II G++ ++ + + F++ M + V+P++ S L+AC + + G Q+
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF--------------RRIDDKDIVA 310
HG +K G D FV S L+ +Y G ++DA LF RR D +IV
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 311 WNSMILAHAQLGQGSSRSMQLLQELHRTT---SLQIQG---------------------- 345
WN MI + +LG + M + R+ + I G
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 346 ----ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFK 401
TL+++L + L G +H S + ++G+AL+ MYS+CG I A
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 402 AFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLA 461
F + ++ +WS++I + +G +A++ +M G+ + + +++CS
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390
Query: 462 INVGKQFHVFAIK-SGYNHDVYVGSSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMI 519
+ G+++ + G + ++D+ + G ++++++ + + +KP++VI+ A++
Sbjct: 391 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Query: 520 CGYAHHGQAKQAIEIFTML 538
G + + +L
Sbjct: 451 GACRMQGNVEMGKRVANIL 469
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 171/370 (46%), Gaps = 55/370 (14%)
Query: 1 MPHRNVVTWTTLIS--SHLRAGSVPKAFQLFNDMRVMDE--RPNEYTFSVLLRACATPAL 56
MP RN +W T+I S A LF +M + DE PN +TF +L+ACA
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEM-MSDEFVEPNRFTFPSVLKACAKTGK 143
Query: 57 WNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFH-DLLERDLVA----- 110
G QIHG+ ++ G D+F S+LV MY G ++DA +F+ +++E+D+V
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGF-MKDARVLFYKNIIEKDMVVMTDRR 202
Query: 111 --------WNVMISGFAQVGDFCMVQRLFSEM--------------WEVEG--------- 139
WNVMI G+ ++GD + LF +M + + G
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 140 -------LKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKC 189
++P+ T VS+L S LG + +H A G D V+ SA++D+Y+KC
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 190 GDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTL 249
G + +F+ + ++ WS++I+G+ ++ + +A+ F M + V+P + L
Sbjct: 323 GIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 382
Query: 250 RACVEIEDLNTGVQVHGQMIK-NGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK-D 307
AC + G + QM+ +G + ++ L G L +AE+ + K D
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPD 442
Query: 308 IVAWNSMILA 317
V W +++ A
Sbjct: 443 DVIWKALLGA 452
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 138/320 (43%), Gaps = 57/320 (17%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R+VV+W T+IS + G A ++F +M+ D RPN T +L A + +G
Sbjct: 234 MRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG 293
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA- 119
+H SG+ D GS+L+ MYS G + A VF L +++ W+ MI+GFA
Sbjct: 294 EWLHLYAEDSGIRIDDVLGSALIDMYSKCGI-IEKAIHVFERLPRENVITWSAMINGFAI 352
Query: 120 --QVGD----FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASK 169
Q GD FC +++ G++P + +++LL CS G V + + S
Sbjct: 353 HGQAGDAIDCFCKMRQ--------AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSV 404
Query: 170 FGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHF 229
G E MVDL + G + D EE F
Sbjct: 405 DGLEPRIEHYGCMVDLLGRSG-------LLDEAEE------------------------F 433
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN-GHQNDCFVASVLLTLYA 288
+M +KPD + + L AC ++ G +V ++ H + +VA L +YA
Sbjct: 434 ILNM---PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVA--LSNMYA 488
Query: 289 NFGGLRDAEKLFRRIDDKDI 308
+ G + ++ R+ +KDI
Sbjct: 489 SQGNWSEVSEMRLRMKEKDI 508
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 281/547 (51%), Gaps = 31/547 (5%)
Query: 154 CSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSI 213
C +G +++ + K T+ V+ + +A D +FD + ++D +S
Sbjct: 4 CLRIGRFIRLGNVTVK---STNLVLRCVFIRNFATHAD-----HLFDELPQRDLSSLNSQ 55
Query: 214 ISGYTVNNRGEEAVHFFKDMCKQRVKPD--QHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
+S + + + + F + R PD H + L AC + TG QVH MIK
Sbjct: 56 LSSHLRSGNPNDTLALFLQI--HRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQ 113
Query: 272 GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQL 331
G + + L+ +Y+ +G L D+ ++F +++KD+V+WN+++ + G+G ++ +
Sbjct: 114 GAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGK-EALGV 172
Query: 332 LQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYS 391
++R ++I TL +++K+C + L G+Q+H++V+ + ++G A++ YS
Sbjct: 173 FAAMYRE-RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYS 230
Query: 392 ECGQIGDAFKAFVDI-VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLP 450
G I +A K + + V D+ +S+I +N EA L +S
Sbjct: 231 SVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSS---- 286
Query: 451 LCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKP 510
++ CS + +GKQ H A+++G+ D + + ++DMY KCG + ++ +F A
Sbjct: 287 -SLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSK 345
Query: 511 NEVIYNAMICGYAHHGQAKQAIEIFTML--EKNGVTPNQVTFLAMLSACSHAGYIEDTLN 568
+ V + +MI YA +G +A+EIF + E +GV PN VTFL ++SAC+HAG +++
Sbjct: 346 SVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKE 405
Query: 569 LFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK----DGSE---SAWRTLLSA 621
F +M KY++ P +EHY C +D +AG EE +++V++ D + W +LSA
Sbjct: 406 CFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSA 465
Query: 622 CRNHNNTKIGEKSAKKMI-ELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
C + + GE A++++ E P + + Y+L+SN Y GKW+ + R K+ G+ K
Sbjct: 466 CSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKT 525
Query: 681 PGSSWLI 687
G S I
Sbjct: 526 AGHSLFI 532
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 191/371 (51%), Gaps = 25/371 (6%)
Query: 142 PD--NRTFVSLLKCCSTLG---EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCR 196
PD + TF +L CS L Q+H L K GAET + +A++D+Y+K G +
Sbjct: 80 PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSV 139
Query: 197 KIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIE 256
++F+S+EEKD W++++SG+ N +G+EA+ F M ++RV+ + LSS ++ C ++
Sbjct: 140 RVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLK 199
Query: 257 DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMI 315
L G QVH ++ G ++ + + +++ Y++ G + +A K++ ++ D V NS+I
Sbjct: 200 ILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLI 258
Query: 316 LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS 375
G R+ + + + L + L C + SDL G+QIH + +++
Sbjct: 259 -------SGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNG 311
Query: 376 VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCK 435
+ + N L+ MY +CGQI A F I K SW+S+I Y NG +ALE+ +
Sbjct: 312 FVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFR 371
Query: 436 EMLAE--GITFTSYSLPLCISSCSQLLAINVGKQ-FHV----FAIKSGYNHDVYVGSSII 488
EM E G+ S + + IS+C+ + GK+ F + + + G H V I
Sbjct: 372 EMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV----CFI 427
Query: 489 DMYAKCGHMED 499
D+ +K G E+
Sbjct: 428 DILSKAGETEE 438
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 198/371 (53%), Gaps = 14/371 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P R++ + + +SSHLR+G+ LF + + +TF+ +L AC+ + G
Sbjct: 44 LPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETG 103
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+H ++++ G E + ++L+ MYS G +L D+ VF + E+DLV+WN ++SGF +
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYG-HLVDSVRVFESVEEKDLVSWNALLSGFLR 162
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAV 177
G +F+ M+ E ++ T S++K C++L + Q+H + G + V
Sbjct: 163 NGKGKEALGVFAAMYR-ERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VV 220
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ +AM+ Y+ G ++ K+++S+ D + +S+ISG N +EA F M +Q
Sbjct: 221 LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA---FLLMSRQ 277
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
R P+ VLSS+L C + DL G Q+H ++NG +D + + L+ +Y G + A
Sbjct: 278 R--PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQA 335
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQEL-HRTTSLQIQGATLIAILKSC 355
+FR I K +V+W SMI A+A G G +++++ +E+ + + T + ++ +C
Sbjct: 336 RTIFRAIPSKSVVSWTSMIDAYAVNGDG-VKALEIFREMCEEGSGVLPNSVTFLVVISAC 394
Query: 356 KNKSDLPAGRQ 366
+ + G++
Sbjct: 395 AHAGLVKEGKE 405
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/555 (27%), Positives = 273/555 (49%), Gaps = 24/555 (4%)
Query: 142 PDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDA-VVSSAMVDLYAKCGDVSSCRKIFD 200
P + +L K C + + QIH + G E D ++S + + +S +F+
Sbjct: 8 PSLLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFE 67
Query: 201 SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV-KPDQHVLSSTLRACVEIEDLN 259
+ ++W+ +I GY+ E V M + + +PD++ ++ C +
Sbjct: 68 RVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVR 127
Query: 260 TGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHA 319
G VHG +++ G D V + + Y L A K+F + +++ V+W ++++A+
Sbjct: 128 VGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYV 187
Query: 320 QLGQ-GSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSH 378
+ G+ ++SM +L +L A + ++KS DL +++ + K +
Sbjct: 188 KSGELEEAKSMF---DLMPERNLGSWNALVDGLVKS----GDLVNAKKLFDEMPKRDIIS 240
Query: 379 PTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEML 438
T +++ Y++ G + A F + D +WS++I Y QNG +EA ++ EM
Sbjct: 241 YT----SMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 439 AEGITFTSYSLPLCISSCSQL----LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKC 494
A+ + + + +S+CSQ+ L V H K + YV ++IDM AKC
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH---YVVPALIDMNAKC 353
Query: 495 GHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAML 554
GHM+ + K+F+ + + V Y +M+ G A HG +AI +F + G+ P++V F +L
Sbjct: 354 GHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL 413
Query: 555 SACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGS 611
C + +E+ L F LM KY I +HYSC+V+ R G+L+EAY++++ +
Sbjct: 414 KVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAH 473
Query: 612 ESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREK 671
SAW +LL C H NT+I E A+ + EL P SY+LLSNIY +W + R+K
Sbjct: 474 ASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDK 533
Query: 672 MAKTGVKKDPGSSWL 686
M + G+ K G SW+
Sbjct: 534 MNENGITKICGRSWI 548
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 233/508 (45%), Gaps = 37/508 (7%)
Query: 39 PNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACC 98
P+ + L + C + N QIH ++R GLE+D+ S + S++ S+L +
Sbjct: 8 PSLLSLETLFKLCKSEIHLN---QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSS 64
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG 158
VF + WN +I G++ F + M +PD TF ++K CS G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 159 EVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIIS 215
+V +HGL + G + D VV ++ VD Y KC D+ S RK+F M E++ W++++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 216 GYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQN 275
Y + EEA F D+ +R + L L V+ DL ++ +M K
Sbjct: 185 AYVKSGELEEAKSMF-DLMPERNLGSWNALVDGL---VKSGDLVNAKKLFDEMPK----R 236
Query: 276 DCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQEL 335
D + ++ YA G + A LF D+ AW+++IL +AQ GQ + + ++ E+
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQ-PNEAFKVFSEM 295
Query: 336 HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV---MKSSVSHPTLVGNALVHMYSE 392
+++ ++ ++ +C ++ S + M SH V AL+ M ++
Sbjct: 296 C-AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH--YVVPALIDMNAK 352
Query: 393 CGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC 452
CG + A K F ++ +D S+ S++ +G SEA+ L ++M+ EGI + +
Sbjct: 353 CGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVI 412
Query: 453 ISSCSQLLAINVG--------KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
+ C Q + G K++ + A Y S I+++ ++ G ++++ ++
Sbjct: 413 LKVCGQSRLVEEGLRYFELMRKKYSILASPDHY-------SCIVNLLSRTGKLKEAYELI 465
Query: 505 DAQ-VKPNEVIYNAMICGYAHHGQAKQA 531
+ + + + +++ G + HG + A
Sbjct: 466 KSMPFEAHASAWGSLLGGCSLHGNTEIA 493
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 195/399 (48%), Gaps = 20/399 (5%)
Query: 28 LFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYS 87
L MR RP+EYTF ++++ C+ VG +HG+++R G ++D G+S V Y
Sbjct: 97 LMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFY- 155
Query: 88 NNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTF 147
+L A VF ++ ER+ V+W ++ + + G+ + +F M E L N
Sbjct: 156 GKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPE-RNLGSWNALV 214
Query: 148 VSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN 207
L+K G+++ L + + D + ++M+D YAK GD+ S R +F+ D
Sbjct: 215 DGLVKS----GDLVNAKKLFDEM-PKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDV 269
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV--- 264
WS++I GY N + EA F +MC + VKPD+ ++ + AC ++ +V
Sbjct: 270 RAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSY 329
Query: 265 -HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ 323
H +M K +V L+ + A G + A KLF + +D+V++ SM+ A G
Sbjct: 330 LHQRMNKFSSH---YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGC 386
Query: 324 GSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK--SSVSHPTL 381
G S +++L +++ + + A ILK C + G + L+ K S ++ P
Sbjct: 387 G-SEAIRLFEKMVDEGIVPDEVA-FTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDH 444
Query: 382 VGNALVHMYSECGQIGDAFKAFVDIVCK-DDSSWSSIIG 419
+ +V++ S G++ +A++ + + S+W S++G
Sbjct: 445 Y-SCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLG 482
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 161/335 (48%), Gaps = 44/335 (13%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNV- 59
MP RN V+WT L+ +++++G + +A +F+ +M ER WN
Sbjct: 171 MPERNAVSWTALVVAYVKSGELEEAKSMFD---LMPER--------------NLGSWNAL 213
Query: 60 --GLQIHGVLVRSG------LERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAW 111
GL G LV + +RD + +S++ Y+ G ++ A +F + D+ AW
Sbjct: 214 VDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGG-DMVSARDLFEEARGVDVRAW 272
Query: 112 NVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG--EVMQ-----IH 164
+ +I G+AQ G ++FSEM + +KPD V L+ CS +G E+ + +H
Sbjct: 273 SALILGYAQNGQPNEAFKVFSEMC-AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH 331
Query: 165 GLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGE 224
+KF + V A++D+ AKCG + K+F+ M ++D + S++ G ++ G
Sbjct: 332 QRMNKFSSH---YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGS 388
Query: 225 EAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH---QNDCFVAS 281
EA+ F+ M + + PD+ + L+ C + + G++ M K D + S
Sbjct: 389 EAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHY--S 446
Query: 282 VLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMI 315
++ L + G L++A +L + + + AW S++
Sbjct: 447 CIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V W+ LI + + G +AF++F++M + +P+E+ L+ AC+ + + ++
Sbjct: 268 DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVD 327
Query: 65 GVL-VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
L R + +L+ M + G ++ A +F ++ +RDLV++ M+ G A G
Sbjct: 328 SYLHQRMNKFSSHYVVPALIDMNAKCG-HMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGC 386
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC--STLGE--VMQIHGLASKFGAETDAVVS 179
RLF +M + EG+ PD F +LK C S L E + + K+
Sbjct: 387 GSEAIRLFEKMVD-EGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHY 445
Query: 180 SAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGEEA 226
S +V+L ++ G + ++ SM E W S++ G +++ E A
Sbjct: 446 SCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIA 493
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 155/550 (28%), Positives = 276/550 (50%), Gaps = 20/550 (3%)
Query: 149 SLLKCCSTLGEVM----QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE 204
S++K C+ E Q+H L K GA+ D VVS++++ +YAK + RK+FD M
Sbjct: 51 SVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLH 110
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
+D + SII+ + EA+ K+M P +++S L C + + ++
Sbjct: 111 RDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARM 170
Query: 265 HGQMI--KNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
++ Q +++ L+ +Y F A +F +++ K+ V+W +MI +
Sbjct: 171 FHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMI-SGCVAN 229
Query: 323 QGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG----RQIHSLVMKSSVSH 378
Q + L + + R +L+ TL+++L +C +L G ++IH +
Sbjct: 230 QNYEMGVDLFRAMQRE-NLRPNRVTLLSVLPAC---VELNYGSSLVKEIHGFSFRHGCHA 285
Query: 379 PTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEML 438
+ A + MY CG + + F +D WSS+I Y + G SE + L +M
Sbjct: 286 DERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR 345
Query: 439 AEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHME 498
EGI S +L +S+C+ ++ H +K G+ + +G+++IDMYAKCG +
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLS 405
Query: 499 DSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACS 558
+++VF + + V +++MI Y HG +A+EIF + K G + + FLA+LSAC+
Sbjct: 406 AAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACN 465
Query: 559 HAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI---VQKDGSESAW 615
HAG +E+ +FT KY + EHY+C ++ GR G++++A+++ + S W
Sbjct: 466 HAGLVEEAQTIFT-QAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIW 524
Query: 616 RTLLSACRNHNNTKI-GEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAK 674
+LLSAC H + G+ A ++++ P + A+Y+LLS I+ E G + A + R M +
Sbjct: 525 SSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQR 584
Query: 675 TGVKKDPGSS 684
+ K G S
Sbjct: 585 RKLNKCYGFS 594
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 258/505 (51%), Gaps = 30/505 (5%)
Query: 47 LLRACA---TPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSN--LRDACCVFH 101
+++ACA P L +G Q+H + +++G + D +SL+ MY+ +R VF
Sbjct: 52 VIKACAFQQEPFL--LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRK---VFD 106
Query: 102 DLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM 161
++L RD V++ +I+ Q G +L EM+ G P + SLL C+ +G
Sbjct: 107 EMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY-FYGFIPKSELVASLLALCTRMGSSS 165
Query: 162 QIHGLASKFGA--------ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSI 213
++ A F A + ++S+A+VD+Y K D ++ +FD ME K+ W+++
Sbjct: 166 KV---ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAM 222
Query: 214 ISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGV-QVHGQMIKNG 272
ISG N E V F+ M ++ ++P++ L S L ACVE+ ++ V ++HG ++G
Sbjct: 223 ISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHG 282
Query: 273 HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLL 332
D + + +T+Y G + + LF +D+V W+SMI +A+ G S M LL
Sbjct: 283 CHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGD-CSEVMNLL 341
Query: 333 QELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSE 392
++ R ++ TL+AI+ +C N + L +HS ++K L+GNAL+ MY++
Sbjct: 342 NQM-RKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAK 400
Query: 393 CGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC 452
CG + A + F ++ KD SWSS+I Y +G SEALE+ K M+ G +
Sbjct: 401 CGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAI 460
Query: 453 ISSCSQLLAINVGKQFHVFAIKSGYNHDVYVG--SSIIDMYAKCGHMEDSKKV-FDAQVK 509
+S+C+ + + +F Y+ V + + I++ + G ++D+ +V + +K
Sbjct: 461 LSACNHAGLVEEAQT--IFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMK 518
Query: 510 PNEVIYNAMICGYAHHGQAKQAIEI 534
P+ I+++++ HG+ A +I
Sbjct: 519 PSARIWSSLLSACETHGRLDVAGKI 543
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 12/259 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M +N V+WT +IS + + LF M+ + RPN T +L AC N G
Sbjct: 211 MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE---LNYG 267
Query: 61 ----LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMIS 116
+IHG R G D+ ++ + MY G N+ + +F RD+V W+ MIS
Sbjct: 268 SSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCG-NVSLSRVLFETSKVRDVVMWSSMIS 326
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFGAE 173
G+A+ GD V L ++M + EG++ ++ T ++++ C+ L +H K G
Sbjct: 327 GYAETGDCSEVMNLLNQMRK-EGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFM 385
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ ++ +A++D+YAKCG +S+ R++F + EKD WSS+I+ Y ++ G EA+ FK M
Sbjct: 386 SHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM 445
Query: 234 CKQRVKPDQHVLSSTLRAC 252
K + D + L AC
Sbjct: 446 IKGGHEVDDMAFLAILSAC 464
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 8/252 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R+VV W+++IS + G + L N MR N T ++ AC L + +
Sbjct: 316 RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
H +++ G G++L+ MY+ GS L A VF++L E+DLV+W+ MI+ + G
Sbjct: 376 HSQILKCGFMSHILLGNALIDMYAKCGS-LSAAREVFYELTEKDLVSWSSMINAYGLHGH 434
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAETDAVVSS 180
+F M + G + D+ F+++L C+ G E I A K+ +
Sbjct: 435 GSEALEIFKGMIK-GGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYA 493
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNF-VWSSIISGYTVNNRGEEAVHFFKD--MCKQR 237
++L + G + ++ +M K + +WSS++S + R + A + M +
Sbjct: 494 CYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEP 553
Query: 238 VKPDQHVLSSTL 249
P +VL S +
Sbjct: 554 DNPANYVLLSKI 565
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 237/467 (50%), Gaps = 41/467 (8%)
Query: 257 DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMIL 316
+L T Q H MI G D + + +N G LR A +F + N+MI
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 317 AHAQLGQGSSRSMQLLQELHR---TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK 373
A + L + ++ S+ + ++R + T +LK SD+ GRQIH V+
Sbjct: 87 ALSLLDEPNAHSIAI--TVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 374 SSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD----------------------- 410
V L+ MY CG +GDA K F +++ KD
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 411 ----------DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLL 460
+ SW+ +I Y ++G SEA+E+ + ML E + +L +S+C+ L
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMIC 520
++ +G++ + G N V + +++IDMYAK G++ + VF+ + N V + +I
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 521 GYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIK 580
G A HG +A+ +F + K GV PN VTF+A+LSACSH G+++ LF M KY I
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIH 384
Query: 581 PESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKK 637
P EHY C++D GRAG+L EA ++++ + + W +LL+A H++ ++GE++ +
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSE 444
Query: 638 MIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+I+L P++ +Y+LL+N+Y G+W+E+R R M GVKK G S
Sbjct: 445 LIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGES 491
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 192/435 (44%), Gaps = 40/435 (9%)
Query: 147 FVSLLKC-CSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
FV+ LK + L + Q H G D + + ++ + G + +F
Sbjct: 17 FVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCP 76
Query: 206 DNFVWSSIISGYTV---NNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGV 262
+ ++ +++I ++ N A+ ++ + KPD L+ V + D+ G
Sbjct: 77 NTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGR 136
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
Q+HGQ++ G + V + L+ +Y + GGL DA K+F + KD+ WN+++ + ++G
Sbjct: 137 QIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVG 196
Query: 323 Q-----------------------------GSSRSMQLLQELHR--TTSLQIQGATLIAI 351
+ S R+ + ++ R +++ TL+A+
Sbjct: 197 EMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAV 256
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
L +C + L G +I S V ++ + NA++ MY++ G I A F + ++
Sbjct: 257 LSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNV 316
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHV 470
+W++II +G +EAL + M+ G+ + +S+CS + +++GK+ F+
Sbjct: 317 VTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNS 376
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGY-AHHG-- 526
K G + ++ +ID+ + G + ++ +V + K N I+ +++ HH
Sbjct: 377 MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLE 436
Query: 527 QAKQAIEIFTMLEKN 541
++A+ LE N
Sbjct: 437 LGERALSELIKLEPN 451
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 185/424 (43%), Gaps = 49/424 (11%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
Q H ++ +GL RD + + SN G +LR A VF + N MI + +
Sbjct: 33 QSHCYMIITGLNRDNLNVAKFIEACSNAG-HLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 122 GD---FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETD 175
+ + ++ ++W + KPD TF +LK + +V QIHG FG ++
Sbjct: 92 DEPNAHSIAITVYRKLWALCA-KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSS 150
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSS----------------------- 212
V + ++ +Y CG + RK+FD M KD VW++
Sbjct: 151 VHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPC 210
Query: 213 ----------IISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGV 262
+ISGY + R EA+ F+ M + V+PD+ L + L AC ++ L G
Sbjct: 211 WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
++ + G + + ++ +YA G + A +F ++++++V W ++I A G
Sbjct: 271 RICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG 330
Query: 323 QGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLV 382
G + ++ + + + ++ T IAIL +C + + G+++ + + HP +
Sbjct: 331 HG-AEALAMFNRMVK-AGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIE 388
Query: 383 G-NALVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSIIGTYKQNGMESEALELCKEMLAE 440
++ + G++ +A + + K +++ W S++ + LEL + L+E
Sbjct: 389 HYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH----HDLELGERALSE 444
Query: 441 GITF 444
I
Sbjct: 445 LIKL 448
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 40/331 (12%)
Query: 25 AFQLFNDMRVMDERPNEYTFSVLLR-ACATPALWNVGLQIHGVLVRSGLERDKFAGSSLV 83
A ++ + + +P+ +TF +L+ A +W G QIHG +V G + + L+
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVW-FGRQIHGQVVVFGFDSSVHVVTGLI 158
Query: 84 YMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLF------------ 131
MY + G L DA +F ++L +D+ WN +++G+ +VG+ + L
Sbjct: 159 QMYFSCGG-LGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVS 217
Query: 132 --------------SEMWEV------EGLKPDNRTFVSLLKCCSTLGEV---MQIHGLAS 168
SE EV E ++PD T +++L C+ LG + +I
Sbjct: 218 WTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVD 277
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVH 228
G +++A++D+YAK G+++ +F+ + E++ W++II+G + G EA+
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALA 337
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQM-IKNGHQNDCFVASVLLTLY 287
F M K V+P+ + L AC + ++ G ++ M K G + ++ L
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLL 397
Query: 288 ANFGGLRDAEKLFRRIDDKDIVA-WNSMILA 317
G LR+A+++ + + K A W S++ A
Sbjct: 398 GRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 120/232 (51%), Gaps = 10/232 (4%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
RN V+WT +IS + ++G +A ++F M + + P+E T +L ACA +G +I
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
+ G+ R ++++ MY+ +G N+ A VF + ER++V W +I+G A G
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSG-NITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV----MQIHGLASKFGAETDAVVS 179
+F+ M + G++P++ TF+++L CS +G V + + SK+G +
Sbjct: 332 GAEALAMFNRMVKA-GVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDN-FVWSSIISGYTVNNR---GEEAV 227
M+DL + G + ++ SM K N +W S+++ V++ GE A+
Sbjct: 391 GCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 151/366 (41%), Gaps = 74/366 (20%)
Query: 338 TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIG 397
TSL+I G ++L +Q H ++ + ++ L + S G +
Sbjct: 18 VTSLKIHG-------------NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLR 64
Query: 398 DAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSY---------- 447
A+ F C + TY N M AL L E A I T Y
Sbjct: 65 YAYSVFTHQPCPN---------TYLHNTM-IRALSLLDEPNAHSIAITVYRKLWALCAKP 114
Query: 448 ---SLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
+ P + ++ + G+Q H + G++ V+V + +I MY CG + D++K+F
Sbjct: 115 DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMF 174
Query: 505 DA-----------------------------QVKP----NEVIYNAMICGYAHHGQAKQA 531
D ++ P NEV + +I GYA G+A +A
Sbjct: 175 DEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEA 234
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
IE+F + V P++VT LA+LSAC+ G +E + + + ++ + S + + ++D
Sbjct: 235 IEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLN-NAVID 293
Query: 592 AYGRAGRLEEAYQIVQ--KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIE--LNPSDHA 647
Y ++G + +A + + + + W T+++ H + +M++ + P+D
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 648 SYILLS 653
+LS
Sbjct: 354 FIAILS 359
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 235 bits (599), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 235/477 (49%), Gaps = 46/477 (9%)
Query: 247 STLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTL-----YANFGGLRDAEKLFR 301
S L+ C + E+L Q+H +M+K G D + + L+ ++F L A+ +F
Sbjct: 19 SCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDF--LPYAQIVFD 73
Query: 302 RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
D D WN MI + RS+ L Q + +S T ++LK+C N S
Sbjct: 74 GFDRPDTFLWNLMIRGFS-CSDEPERSLLLYQRM-LCSSAPHNAYTFPSLLKACSNLSAF 131
Query: 362 PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTY 421
QIH+ + K + N+L++ Y+ G A F I DD SW+S+I Y
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191
Query: 422 KQNG-------------------------------MESEALELCKEMLAEGITFTSYSLP 450
+ G M EAL+L EM + + SL
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251
Query: 451 LCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKP 510
+S+C+QL A+ GK H + K+ D +G +IDMYAKCG ME++ +VF K
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
Query: 511 NEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLF 570
+ + A+I GYA+HG ++AI F ++K G+ PN +TF A+L+ACS+ G +E+ +F
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371
Query: 571 TLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNN 627
M Y +KP EHY C+VD GRAG L+EA + +Q+ + W LL ACR H N
Sbjct: 372 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 431
Query: 628 TKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
++GE+ + +I ++P Y+ +NI+ + KW++A + R M + GV K PG S
Sbjct: 432 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCS 488
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 198/430 (46%), Gaps = 44/430 (10%)
Query: 148 VSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSS------CRKIFDS 201
+S L+ CS E+ QIH K G D S A+ + C +S + +FD
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQD---SYAITKFLSFCISSTSSDFLPYAQIVFDG 74
Query: 202 MEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
+ D F+W+ +I G++ ++ E ++ ++ M + + S L+AC +
Sbjct: 75 FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQL 321
Q+H Q+ K G++ND + + L+ YA G + A LF RI + D V+WNS+I + +
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 322 GQ------------------------------GSSRSMQLLQELHRTTSLQIQGATLIAI 351
G+ + ++QL E+ + + ++ +L
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-QNSDVEPDNVSLANA 253
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
L +C L G+ IHS + K+ + +++G L+ MY++CG++ +A + F +I K
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
+W+++I Y +G EA+ EM GI + +++CS + GK +
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI-FY 372
Query: 472 AIKSGYNHDVYVG--SSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMICGYAHHGQA 528
+++ YN + I+D+ + G ++++K+ + + +KPN VI+ A++ H
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432
Query: 529 KQAIEIFTML 538
+ EI +L
Sbjct: 433 ELGEEIGEIL 442
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 159/353 (45%), Gaps = 46/353 (13%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+ W +I + ++ L+ M N YTF LL+AC+ + + QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
+ + G E D +A +SL+ Y+ G N + A +F + E D V+WN +I G+ + G
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTG-NFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 125 CMVQRLFSEMWEVEGL------------------------------KPDNRTFVSLLKCC 154
+ LF +M E + +PDN + + L C
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 155 STLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWS 211
+ LG + Q IH +K D+V+ ++D+YAKCG++ ++F ++++K W+
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 212 SIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
++ISGY + G EA+ F +M K +KP+ ++ L AC TG+ G++I
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS-----YTGLVEEGKLIFY 372
Query: 272 GHQNDCFVASV------LLTLYANFGGLRDAEKLFRRIDDK-DIVAWNSMILA 317
+ D + ++ L G L +A++ + + K + V W +++ A
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 175/396 (44%), Gaps = 43/396 (10%)
Query: 62 QIHGVLVRSGLERDKFAGSS-LVYMYSNNGSNLRDACCVFHDLLER-DLVAWNVMISGFA 119
QIH ++++GL +D +A + L + S+ S+ + D +R D WN+MI GF+
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 91
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNR-TFVSLLKCCSTLG---EVMQIHGLASKFGAETD 175
+ L+ M + P N TF SLLK CS L E QIH +K G E D
Sbjct: 92 CSDEPERSLLLYQRM--LCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSI---------------------- 213
+++++ YA G+ +FD + E D+ W+S+
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 214 ---------ISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
ISGY + +EA+ F +M V+PD L++ L AC ++ L G +
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
H + K + D + VL+ +YA G + +A ++F+ I K + AW ++I +A G G
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG- 383
+ ++ + ++ T A+L +C + G+ I + + PT+
Sbjct: 330 REAISKFME--MQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSII 418
+V + G + +A + ++ K ++ W +++
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M +N ++WTT+IS +++A +A QLF++M+ D P+ + + L ACA G
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
IH L ++ + D G L+ MY+ G + +A VF ++ ++ + AW +ISG+A
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCG-EMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G F EM ++ G+KP+ TF ++L CS G V + + + + +
Sbjct: 326 HGHGREAISKFMEMQKM-GIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN-FVWSSIISGYTVNNR---GEE 225
+VDL + G + ++ M K N +W +++ ++ GEE
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 447 YSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDM---YAKCGHMEDSKKV 503
Y C+ CS+ + KQ H +K+G D Y + + + ++ V
Sbjct: 15 YETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIV 71
Query: 504 FDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI 563
FD +P+ ++N MI G++ + ++++ ++ + + N TF ++L ACS+
Sbjct: 72 FDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 131
Query: 564 EDTLNLFTLMLYKYKIKPESEHYSC--LVDAYGRAGRLEEAYQIVQK--DGSESAWRTLL 619
E+T + + K+ E++ Y+ L+++Y G + A+ + + + + +W +++
Sbjct: 132 EETTQIHAQIT---KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVI 188
Query: 620 SACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKK 679
I +KM E N S+ + + Y++ +EA +M + V+
Sbjct: 189 KGYVKAGKMDIALTLFRKMAEKNA---ISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 680 D 680
D
Sbjct: 246 D 246
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 241/429 (56%), Gaps = 6/429 (1%)
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
G+Q+HG ++K+G VA+ L+ Y+ D+ + F K W+S+I AQ
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 321 LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPT 380
+ S++ L+++ +L+ L + KSC S GR +H L MK+
Sbjct: 94 -NELPWMSLEFLKKM-MAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADV 151
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
VG++LV MY++CG+I A K F ++ ++ +WS ++ Y Q G EAL L KE L E
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
+ YS IS C+ + +G+Q H +IKS ++ +VGSS++ +Y+KCG E +
Sbjct: 212 NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 501 KKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHA 560
+VF+ N I+NAM+ YA H ++ IE+F ++ +G+ PN +TFL +L+ACSHA
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 561 GYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRT 617
G +++ F M + +I+P +HY+ LVD GRAGRL+EA +++ D +ES W
Sbjct: 332 GLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 618 LLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGV 677
LL++C H NT++ +A K+ EL P +I LSN Y +G++E+A R+ + G
Sbjct: 391 LLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGE 450
Query: 678 KKDPGSSWL 686
KK+ G SW+
Sbjct: 451 KKETGLSWV 459
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 179/363 (49%), Gaps = 8/363 (2%)
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
GLQ+HG +V+SGL ++L+ YS + D+ F D ++ W+ +IS FA
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPF-DSRRAFEDSPQKSSTTWSSIISCFA 92
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDA 176
Q M +M L+PD+ S K C+ L +H L+ K G + D
Sbjct: 93 QNELPWMSLEFLKKMM-AGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADV 151
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V S++VD+YAKCG++ RK+FD M +++ WS ++ GY EEA+ FK+ +
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+ + + SS + C L G Q+HG IK+ + FV S L++LY+ G A
Sbjct: 212 NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
++F + K++ WN+M+ A+AQ + + ++L + + + + ++ T + +L +C
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSH-TQKVIELFKRM-KLSGMKPNFITFLNVLNACS 329
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI-VCKDDSSWS 415
+ + GR + +S + +LV M G++ +A + ++ + +S W
Sbjct: 330 HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 416 SII 418
+++
Sbjct: 390 ALL 392
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 132/247 (53%), Gaps = 5/247 (2%)
Query: 25 AFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVY 84
+ + M + RP+++ ++CA + ++G +H + +++G + D F GSSLV
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159
Query: 85 MYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDN 144
MY+ G + A +F ++ +R++V W+ M+ G+AQ+G+ LF E E L ++
Sbjct: 160 MYAKCGE-IVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL-FENLAVND 217
Query: 145 RTFVSLLKCC--STLGEV-MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDS 201
+F S++ C STL E+ QIHGL+ K ++ + V S++V LY+KCG ++F+
Sbjct: 218 YSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE 277
Query: 202 MEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
+ K+ +W++++ Y ++ ++ + FK M +KP+ + L AC ++ G
Sbjct: 278 VPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEG 337
Query: 262 VQVHGQM 268
QM
Sbjct: 338 RYYFDQM 344
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 8/231 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNVVTW+ ++ + + G +A LF + + N+Y+FS ++ CA L +G
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
QIHG+ ++S + F GSSLV +YS G A VF+++ ++L WN M+ +AQ
Sbjct: 237 RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP-EGAYQVFNEVPVKNLGIWNAMLKAYAQ 295
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
V LF M ++ G+KP+ TF+++L CS G V + + TD
Sbjct: 296 HSHTQKVIELFKRM-KLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDK 354
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGEEA 226
+S +VD+ + G + ++ +M + VW ++++ TV+ E A
Sbjct: 355 HYAS-LVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELA 404
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 227/433 (52%), Gaps = 17/433 (3%)
Query: 262 VQVHGQMIKNGHQNDCFVASVL--LTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHA 319
+Q+ IK+ ++ FVA ++ T + A LF + + DIV +NSM
Sbjct: 46 MQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSM----- 100
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGA-----TLIAILKSCKNKSDLPAGRQIHSLVMKS 374
+G SR L+ + G T ++LK+C L GRQ+H L MK
Sbjct: 101 --ARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKL 158
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELC 434
+ V L++MY+EC + A F IV ++++I Y + +EAL L
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKC 494
+EM + + +L +SSC+ L ++++GK H +A K + V V +++IDM+AKC
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 495 GHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAML 554
G ++D+ +F+ + ++AMI YA+HG+A++++ +F + V P+++TFL +L
Sbjct: 279 GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL 338
Query: 555 SACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGS 611
+ACSH G +E+ F+ M+ K+ I P +HY +VD RAG LE+AY+ + K +
Sbjct: 339 NACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPT 398
Query: 612 ESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREK 671
WR LL+AC +HNN + EK ++++ EL+ S Y++LSN+Y KWE R+
Sbjct: 399 PMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKV 458
Query: 672 MAKTGVKKDPGSS 684
M K PG S
Sbjct: 459 MKDRKAVKVPGCS 471
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 186/350 (53%), Gaps = 9/350 (2%)
Query: 61 LQIHGVLVRSGLERDKFAGSSLVY-MYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
+QI ++S +E F + + S S++ A +F + E D+V +N M G++
Sbjct: 46 MQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLASKFGAETDA 176
+ + V LF E+ E +G+ PDN TF SLLK C+ L E Q+H L+ K G + +
Sbjct: 106 RFTNPLEVFSLFVEILE-DGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNV 164
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V ++++Y +C DV S R +FD + E ++++I+GY NR EA+ F++M +
Sbjct: 165 YVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGK 224
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+KP++ L S L +C + L+ G +H K+ V + L+ ++A G L DA
Sbjct: 225 YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA 284
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+F ++ KD AW++MI+A+A G+ + +SM + + + R+ ++Q T + +L +C
Sbjct: 285 VSIFEKMRYKDTQAWSAMIVAYANHGK-AEKSMLMFERM-RSENVQPDEITFLGLLNACS 342
Query: 357 NKSDLPAGRQIHS-LVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVD 405
+ + GR+ S +V K + ++V + S G + DA++ F+D
Sbjct: 343 HTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE-FID 391
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 194/404 (48%), Gaps = 12/404 (2%)
Query: 148 VSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSS---CRKIFDSMEE 204
+ L+ C++L E+MQI A K E D + +++ + SS R +F++M E
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
D +++S+ GY+ E F ++ + + PD + S L+AC + L G Q+
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQG 324
H +K G ++ +V L+ +Y + A +F RI + +V +N+MI +A+ +
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR- 210
Query: 325 SSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
+ ++ L +E+ + L+ TL+++L SC L G+ IH K S V
Sbjct: 211 PNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 269
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
AL+ M+++CG + DA F + KD +WS++I Y +G +++ + + M +E +
Sbjct: 270 ALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 329
Query: 445 TSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
+ +++CS + G++ F K G + S++D+ ++ G++ED+ +
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 389
Query: 504 FDA-QVKPNEVIYNAMICGYAHHGQ----AKQAIEIFTMLEKNG 542
D + P +++ ++ + H K + IF + + +G
Sbjct: 390 IDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHG 433
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 152/307 (49%), Gaps = 6/307 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M ++V + ++ + R + + F LF ++ P+ YTF LL+ACA G
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+H + ++ GL+ + + +L+ MY+ ++ A CVF ++E +V +N MI+G+A+
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYT-ECEDVDSARCVFDRIVEPCVVCYNAMITGYAR 207
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
LF EM + + LKP+ T +S+L C+ LG + IH A K
Sbjct: 208 RNRPNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK 266
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V++A++D++AKCG + IF+ M KD WS++I Y + + E+++ F+ M +
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI-KNGHQNDCFVASVLLTLYANFGGLRDA 296
V+PD+ L AC + G + QM+ K G ++ L + G L DA
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
Query: 297 EKLFRRI 303
+ ++
Sbjct: 387 YEFIDKL 393
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/545 (26%), Positives = 263/545 (48%), Gaps = 69/545 (12%)
Query: 209 VWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH--- 265
V S +S + +AV + + +Q ++ +L+S L+ C + + L G +H
Sbjct: 13 VAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHL 72
Query: 266 -----------------GQMIKNG------------HQNDCFVASVLLTLYANFGGLRDA 296
G +K G H + + + +++ Y G L A
Sbjct: 73 KITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRA 132
Query: 297 EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+F + ++D+V+WN+M++ +AQ G ++ +E R+ ++ + +L +C
Sbjct: 133 RVVFDSMPERDVVSWNTMVIGYAQDGN-LHEALWFYKEFRRS-GIKFNEFSFAGLLTACV 190
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD------ 410
L RQ H V+ + ++ +++ Y++CGQ+ A + F ++ KD
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT 250
Query: 411 -------------------------DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFT 445
SW+++I Y + G + AL+L ++M+A G+
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 446 SYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD 505
++ C+ + + + ++ GK+ H + I++ + V SS+IDMY+K G +E S++VF
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Query: 506 -AQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIE 564
K + V +N MI A HG +A+ + + K V PN+ T + +L+ACSH+G +E
Sbjct: 371 ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVE 430
Query: 565 DTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSA 621
+ L F M ++ I P+ EHY+CL+D GRAG +E + +++ + + W +L
Sbjct: 431 EGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGV 490
Query: 622 CRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDP 681
CR H N ++G+K+A ++I+L+P A YILLS+IY + GKWE R M K V K+
Sbjct: 491 CRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEK 550
Query: 682 GSSWL 686
SW+
Sbjct: 551 AVSWI 555
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 191/402 (47%), Gaps = 41/402 (10%)
Query: 74 RDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSE 133
R+ ++ +++V Y +G +R A VF + ERD+V+WN M+ G+AQ G+ + E
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVR-ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKE 169
Query: 134 MWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCG 190
+ G+K + +F LL C ++ Q HG G ++ V+S +++D YAKCG
Sbjct: 170 -FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 191 DVSSCRKIFDSMEEKDNFVWSSIISGY-------------------------------TV 219
+ S ++ FD M KD +W+++ISGY
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 220 NNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFV 279
G A+ F+ M VKP+Q SS L A I L G ++HG MI+ + + V
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 280 ASVLLTLYANFGGLRDAEKLFRRIDDK-DIVAWNSMILAHAQLGQGSSRSMQLLQELHRT 338
S L+ +Y+ G L +E++FR DDK D V WN+MI A AQ G G +++++L ++ +
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLG-HKALRMLDDMIK- 406
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAG-RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIG 397
+Q TL+ IL +C + + G R S+ ++ + L+ + G
Sbjct: 407 FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK 466
Query: 398 DAFKAFVDIVCKDDSS-WSSIIGTYKQNGMESEALELCKEML 438
+ + ++ + D W++I+G + +G E + E++
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELI 508
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 167/354 (47%), Gaps = 43/354 (12%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+VV+W T++ + + G++ +A + + R + NE++F+ LL AC +
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLN 198
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q HG ++ +G + S++ Y+ G + A F ++ +D+ W +ISG+A+
Sbjct: 199 RQAHGQVLVAGFLSNVVLSCSIIDAYAKCG-QMESAKRCFDEMTVKDIHIWTTLISGYAK 257
Query: 121 VGDFCMVQRLFSEMWEVE------------------------------GLKPDNRTFVSL 150
+GD ++LF EM E G+KP+ TF S
Sbjct: 258 LGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSC 317
Query: 151 LKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK-D 206
L +++ + +IHG + +A+V S+++D+Y+K G + + ++F ++K D
Sbjct: 318 LCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHD 377
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHG 266
W+++IS + G +A+ DM K RV+P++ L L AC + G++
Sbjct: 378 CVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFE 437
Query: 267 QM-IKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRID----DKDIVAWNSMI 315
M +++G D + L+ L G ++ L R+I+ + D WN+++
Sbjct: 438 SMTVQHGIVPDQEHYACLIDLLGRAGCFKE---LMRKIEEMPFEPDKHIWNAIL 488
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 232/452 (51%), Gaps = 16/452 (3%)
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN--FGGLRDAEKLFR 301
V+ L+ C ++ L ++H +I NG Q+ + + LL A G L A+ LF
Sbjct: 7 VIVRMLQGCNSMKKLR---KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63
Query: 302 RID-DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI---LKSCKN 357
D D WN +I + SS + + +R + L LKSC+
Sbjct: 64 HFDSDPSTSDWNYLIRGFSN----SSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCER 119
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
+P +IH V++S +V +LV YS G + A K F ++ +D SW+ +
Sbjct: 120 IKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVM 179
Query: 418 IGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGY 477
I + G+ ++AL + K M EG+ SY+L +SSC+ + A+N+G H A
Sbjct: 180 ICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRC 239
Query: 478 NHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTM 537
V+V +++IDMYAKCG +E++ VF+ K + + +N+MI GY HG +AI F
Sbjct: 240 ESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRK 299
Query: 538 LEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAG 597
+ +GV PN +TFL +L CSH G +++ + F +M ++ + P +HY C+VD YGRAG
Sbjct: 300 MVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAG 359
Query: 598 RLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSN 654
+LE + +++ WRTLL +C+ H N ++GE + KK+++L + Y+L+++
Sbjct: 360 QLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTS 419
Query: 655 IYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
IY + R+ + ++ PG SW+
Sbjct: 420 IYSAANDAQAFASMRKLIRSHDLQTVPGWSWI 451
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 162/334 (48%), Gaps = 11/334 (3%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMD-ERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
W LI + S + +N M + RP+ +TF+ L++C L+IHG +
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMV 127
+RSG D +SLV YS NGS + A VF ++ RDLV+WNVMI F+ VG
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGS-VEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQA 192
Query: 128 QRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFGAETDAVVSSAMVD 184
++ M EG+ D+ T V+LL C S L + +H +A E+ VS+A++D
Sbjct: 193 LSMYKRMGN-EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALID 251
Query: 185 LYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHV 244
+YAKCG + + +F+ M ++D W+S+I GY V+ G EA+ FF+ M V+P+
Sbjct: 252 MYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAIT 311
Query: 245 LSSTLRACVEIEDLNTGVQVHGQMIKNGHQN-DCFVASVLLTLYANFGGLRDA-EKLFRR 302
L C + GV+ M H + ++ LY G L ++ E ++
Sbjct: 312 FLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYAS 371
Query: 303 IDDKDIVAWNSMILA---HAQLGQGSSRSMQLLQ 333
+D V W +++ + H L G +L+Q
Sbjct: 372 SCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQ 405
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 7/229 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R++V+W +I G +A ++ M + YT LL +CA + N+G
Sbjct: 168 MPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG 227
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+ +H + E F ++L+ MY+ GS L +A VF+ + +RD++ WN MI G+
Sbjct: 228 VMLHRIACDIRCESCVFVSNALIDMYAKCGS-LENAIGVFNGMRKRDVLTWNSMIIGYGV 286
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G F +M G++P+ TF+ LL CS G V + ++S+F +
Sbjct: 287 HGHGVEAISFFRKM-VASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNV 345
Query: 177 VVSSAMVDLYAKCGDV-SSCRKIFDSMEEKDNFVWSSIISGYTVNNRGE 224
MVDLY + G + +S I+ S +D +W +++ ++ E
Sbjct: 346 KHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLE 394
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 232 bits (592), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 243/444 (54%), Gaps = 14/444 (3%)
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
+ + +S L C + ++ GV+VH + +N+ ++S L+ LYA+ G A ++F
Sbjct: 91 EPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVF 150
Query: 301 RRIDDKD--IVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
R+ +D AWNS+I +A+LGQ +M L ++ ++ T +LK+C
Sbjct: 151 DRMSKRDSSPFAWNSLISGYAELGQYED-AMALYFQM-AEDGVKPDRFTFPRVLKACGGI 208
Query: 359 SDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII 418
+ G IH ++K + V NALV MY++CG I A F I KD SW+S++
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSML 268
Query: 419 GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN 478
Y +G+ EAL++ + M+ GI ++ S +++L+ G+Q H + I+ G
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS---SVLARVLSFKHGRQLHGWVIRRGME 325
Query: 479 HDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML 538
++ V +++I +Y+K G + + +FD ++ + V +NA+I H + ++ F +
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQM 382
Query: 539 EKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGR 598
+ P+ +TF+++LS C++ G +ED LF+LM +Y I P+ EHY+C+V+ YGRAG
Sbjct: 383 HRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGM 442
Query: 599 LEEAYQ-IVQKDGSESA---WRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSN 654
+EEAY IVQ+ G E+ W LL AC H NT IGE +A+++ EL P + ++ LL
Sbjct: 443 MEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIR 502
Query: 655 IYIEEGKWEEARDCREKMAKTGVK 678
IY + + E+ R+ M G++
Sbjct: 503 IYSKAKRAEDVERVRQMMVDRGLE 526
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 196/367 (53%), Gaps = 16/367 (4%)
Query: 44 FSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL 103
F+ LL C + + G+++H ++ L + S LV +Y++ G A VF +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYA-EVAHEVFDRM 153
Query: 104 LERD--LVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM 161
+RD AWN +ISG+A++G + L+ +M E +G+KPD TF +LK C +G V
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE-DGVKPDRFTFPRVLKACGGIGSVQ 212
Query: 162 ---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYT 218
IH K G D V +A+V +YAKCGD+ R +FD + KD W+S+++GY
Sbjct: 213 IGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL 272
Query: 219 VNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCF 278
+ EA+ F+ M + ++PD+ +SS L + G Q+HG +I+ G + +
Sbjct: 273 HHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELS 329
Query: 279 VASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT 338
VA+ L+ LY+ G L A +F ++ ++D V+WN++I AH++ +S ++ +++HR
Sbjct: 330 VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSK----NSNGLKYFEQMHRA 385
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIG 397
+ + G T +++L C N + G ++ SL+ K P + A +V++Y G +
Sbjct: 386 NA-KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 398 DAFKAFV 404
+A+ V
Sbjct: 445 EAYSMIV 451
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 216/481 (44%), Gaps = 77/481 (16%)
Query: 147 FVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
F SLL+ C +L + +++H L + + +SS +V LYA CG ++FD M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 204 EKDN--FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
++D+ F W+S+ISGY + E+A+ + M + VKPD+ L+AC I + G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQL 321
+H ++K G D +V + L+ +YA G + A +F I KD V+WNSM+ +
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 322 GQGSSRSMQLLQELHRTTSLQIQGAT---LIAILKSCKNKSDLPAGRQIHSLVMKSSVSH 378
G LL E L +Q +AI GRQ+H V++ +
Sbjct: 275 G--------LLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEW 326
Query: 379 PTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEM- 437
V NAL+ +YS+ GQ+G A F ++ +D SW++II + +N S L+ ++M
Sbjct: 327 ELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMH 383
Query: 438 ----LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
+GITF S L LC A
Sbjct: 384 RANAKPDGITFVSV-LSLC---------------------------------------AN 403
Query: 494 CGHMEDSKKVFDAQVK-----PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQV 548
G +ED +++F K P Y M+ Y G ++A + ++++ G+
Sbjct: 404 TGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSM--IVQEMGLEAGPT 461
Query: 549 TFLAMLSACSHAGYIEDTLNLFTLMLYK-YKIKPESEH-YSCLVDAYGRAGRLEEAYQIV 606
+ A+L AC Y+ ++ + + ++++P++EH + L+ Y +A R E+ ++
Sbjct: 462 VWGALLYAC----YLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVR 517
Query: 607 Q 607
Q
Sbjct: 518 Q 518
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 10/262 (3%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
W +LIS + G A L+ M +P+ +TF +L+AC +G IH L
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMV 127
V+ G D + ++LV MY+ G ++ A VF + +D V+WN M++G+ G
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCG-DIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEA 280
Query: 128 QRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYA 187
+F M + G++PD S+L + Q+HG + G E + V++A++ LY+
Sbjct: 281 LDIFRLMVQ-NGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYS 339
Query: 188 KCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSS 247
K G + IFD M E+D W++IIS ++ N+ G + +F+ M + KPD S
Sbjct: 340 KRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFVS 396
Query: 248 TLRACVEIEDLNTGVQVHGQMI 269
L C NTG+ G+ +
Sbjct: 397 VLSLCA-----NTGMVEDGERL 413
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+PH++ V+W ++++ +L G + +A +F M P++ S +L + + G
Sbjct: 256 IPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHG 312
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+HG ++R G+E + ++L+ +YS G L AC +F +LERD V+WN +IS ++
Sbjct: 313 RQLHGWVIRRGMEWELSVANALIVLYSKRG-QLGQACFIFDQMLERDTVSWNAIISAHSK 371
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASK-FGAETDA 176
+ + F +M KPD TFVS+L C+ G V ++ L SK +G +
Sbjct: 372 NSNGL---KYFEQMHRANA-KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKM 427
Query: 177 VVSSAMVDLYAKCG 190
+ MV+LY + G
Sbjct: 428 EHYACMVNLYGRAG 441
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 240/458 (52%), Gaps = 18/458 (3%)
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD--- 295
K +H L+ C I+ L +Q+HGQ+ + QND F+ S L+ + ++ +D
Sbjct: 10 KSRKHQCLIFLKLCSSIKHL---LQIHGQIHLSSLQNDSFIISELVRV-SSLSLAKDLAF 65
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A L D WN + ++ S+ + E+ R ++ T +LK+C
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSS-SDSPVESIWVYSEMKRR-GIKPNKLTFPFLLKAC 123
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+ L AGRQI V+K VGN L+H+Y C + DA K F ++ ++ SW+
Sbjct: 124 ASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWN 183
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS 475
SI+ +NG + E EM+ + ++ + +S+C L++ GK H +
Sbjct: 184 SIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVR 241
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIF 535
+ +G++++DMYAK G +E ++ VF+ V N ++AMI G A +G A++A+++F
Sbjct: 242 ELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLF 301
Query: 536 T-MLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
+ M++++ V PN VTFL +L ACSH G ++D F M +KIKP HY +VD G
Sbjct: 302 SKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILG 361
Query: 595 RAGRLEEAYQIVQKDGSES---AWRTLLSACRNH---NNTKIGEKSAKKMIELNPSDHAS 648
RAGRL EAY ++K E WRTLLSAC H ++ IGEK K++IEL P +
Sbjct: 362 RAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGN 421
Query: 649 YILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
++++N + E W EA + R M +T +KK G S L
Sbjct: 422 LVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCL 459
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 171/347 (49%), Gaps = 13/347 (3%)
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYS-NNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
LQIHG + S L+ D F S LV + S + +L A + + WN++ G++
Sbjct: 30 LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYS 89
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS-----TLGEVMQIHGLASKFGAET 174
++SEM + G+KP+ TF LLK C+ T G +Q+ L K G +
Sbjct: 90 SSDSPVESIWVYSEM-KRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL--KHGFDF 146
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
D V + ++ LY C S RK+FD M E++ W+SI++ N + F +M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+R PD+ + L AC +L+ G VH Q++ + +C + + L+ +YA GGL
Sbjct: 207 GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
A +F R+ DK++ W++MI+ AQ G + ++QL ++ + +S++ T + +L +
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYG-FAEEALQLFSKMMKESSVRPNYVTFLGVLCA 323
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAF 400
C + + G + + K P ++ A+V + G++ +A+
Sbjct: 324 CSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAY 370
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 189/416 (45%), Gaps = 48/416 (11%)
Query: 150 LLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDL--YAKCGDVSSCRKIFDSMEEKDN 207
LK CS++ ++QIHG + D+ + S +V + + D++ R + +
Sbjct: 19 FLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTP 78
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
W+ + GY+ ++ E++ + +M ++ +KP++ L+AC L G Q+ +
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 268 MIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSR 327
++K+G D +V + L+ LY DA K+F + ++++V+WNS++ A + G+
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK---- 194
Query: 328 SMQLLQELH---RTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN 384
+ L+ E T++ +L +C +L G+ +HS VM + +G
Sbjct: 195 -LNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGT 251
Query: 385 ALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
ALV MY++ G + A F +V K+ +WS++I Q G EAL+L +M+ E
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 445 TSYSLPL-CISSCSQLLAINVG-KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKK 502
+Y L + +CS ++ G K FH ME K
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGYKYFH--------------------------EMEKIHK 345
Query: 503 VFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACS 558
+KP + Y AM+ G+A + E + ++K P+ V + +LSACS
Sbjct: 346 -----IKPMMIHYGAMV---DILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACS 393
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 155/316 (49%), Gaps = 10/316 (3%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
TW L + + S ++ ++++M+ +PN+ TF LL+ACA+ G QI +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMV 127
++ G + D + G++L+++Y DA VF ++ ER++V+WN +++ + G +V
Sbjct: 140 LKHGFDFDVYVGNNLIHLY-GTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 128 QRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETDAVVSSAMVD 184
F EM + PD T V LL C +LG+++ + + E + + +A+VD
Sbjct: 199 FECFCEMIG-KRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVREL--ELNCRLGTALVD 255
Query: 185 LYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ-RVKPDQH 243
+YAK G + R +F+ M +K+ + WS++I G EEA+ F M K+ V+P+
Sbjct: 256 MYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYV 315
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFV-ASVLLTLYANFGGLRDAEKLFRR 302
L AC ++ G + +M K + ++ + G L +A ++
Sbjct: 316 TFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKK 375
Query: 303 ID-DKDIVAWNSMILA 317
+ + D V W +++ A
Sbjct: 376 MPFEPDAVVWRTLLSA 391
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 8/226 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M RNVV+W +++++ + G + F+ F +M P+E T VLL AC ++G
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNL--SLG 231
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+H ++ LE + G++LV MY+ +G L A VF ++++++ W+ MI G AQ
Sbjct: 232 KLVHSQVMVRELELNCRLGTALVDMYAKSG-GLEYARLVFERMVDKNVWTWSAMIVGLAQ 290
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV----MQIHGLASKFGAETDA 176
G +LFS+M + ++P+ TF+ +L CS G V H + +
Sbjct: 291 YGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMM 350
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNN 221
+ AMVD+ + G ++ M E D VW +++S ++++
Sbjct: 351 IHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHH 396
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 247/487 (50%), Gaps = 47/487 (9%)
Query: 202 MEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
M+E + FV++++ G+ + ++ + M + V P + SS ++A
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGES 890
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQL 321
+Q H + K G + + L+ Y+ G +R+A K+F + ++D +AW +M+ A+ ++
Sbjct: 891 LQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRV 948
Query: 322 GQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTL 381
L + A +A S KN++
Sbjct: 949 -------------------LDMDSANSLANQMSEKNEA---------------------- 967
Query: 382 VGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEG 441
N L++ Y G + A F + KD SW+++I Y QN EA+ + +M+ EG
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 442 ITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSK 501
I ++ IS+C+ L + +GK+ H++ +++G+ DVY+GS+++DMY+KCG +E +
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 502 KVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG 561
VF K N +N++I G A HG A++A+++F +E V PN VTF+++ +AC+HAG
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 562 YIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIV---QKDGSESAWRTL 618
+++ ++ M+ Y I EHY +V + +AG + EA +++ + + + W L
Sbjct: 1148 LVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGAL 1207
Query: 619 LSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVK 678
L CR H N I E + K++ L P + Y LL ++Y E+ +W + + R +M + G++
Sbjct: 1208 LDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIE 1267
Query: 679 KD-PGSS 684
K PG+S
Sbjct: 1268 KICPGTS 1274
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 185/406 (45%), Gaps = 51/406 (12%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M NV + L + ++ +L+ M P+ YT+S L++A + + +
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGES 890
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
LQ H + + G ++L+ YS G +R+A VF ++ ERD +AW M+S + +
Sbjct: 891 LQAH--IWKFGFGFHVKIQTTLIDFYSATG-RIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
V D L ++M +E + S+
Sbjct: 948 VLDMDSANSLANQM-------------------------------------SEKNEATSN 970
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
+++ Y G++ +F+ M KD W+++I GY+ N R EA+ F M ++ + P
Sbjct: 971 CLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIP 1030
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
D+ +S+ + AC + L G +VH ++NG D ++ S L+ +Y+ G L A +F
Sbjct: 1031 DEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVF 1090
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
+ K++ WNS+I A G + ++++ ++ S++ T +++ +C +
Sbjct: 1091 FNLPKKNLFCWNSIIEGLAAHG-FAQEALKMFAKM-EMESVKPNAVTFVSVFTACTHAGL 1148
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGN-----ALVHMYSECGQIGDAFK 401
+ GR+I+ +S + ++V N +VH++S+ G I +A +
Sbjct: 1149 VDEGRRIY----RSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALE 1190
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 216/487 (44%), Gaps = 67/487 (13%)
Query: 47 LLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER 106
+++ C+TP L L ++++ L +D + + ++ L A + E
Sbjct: 779 IIKQCSTPKLLESAL---AAMIKTSLNQDCRLMNQFITACTS-FKRLDLAVSTMTQMQEP 834
Query: 107 DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC---CSTLGEVMQI 163
++ +N + GF L+ M + + P + T+ SL+K S GE +Q
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLR-DSVSPSSYTYSSLVKASSFASRFGESLQA 893
Query: 164 HGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRG 223
H KFG + + ++D Y+ G + RK+FD M E+D+ W++++S Y
Sbjct: 894 H--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYR----- 946
Query: 224 EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI-KNGHQNDCFVASV 282
+ D+++ + QM KN ++C
Sbjct: 947 ------------------------------RVLDMDSANSLANQMSEKNEATSNC----- 971
Query: 283 LLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQ 342
L+ Y G L AE LF ++ KDI++W +MI ++Q + R + + ++
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQ----NKRYREAIAVFYKMMEEG 1027
Query: 343 I--QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAF 400
I T+ ++ +C + L G+++H +++ +G+ALV MYS+CG + A
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 401 KAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLL 460
F ++ K+ W+SII +G EAL++ +M E + + + ++C+
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 461 AINVGKQFHV-----FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVKPNEVI 514
++ G++ + ++I S H Y G ++ +++K G + ++ ++ + + +PN VI
Sbjct: 1148 LVDEGRRIYRSMIDDYSIVSNVEH--YGG--MVHLFSKAGLIYEALELIGNMEFEPNAVI 1203
Query: 515 YNAMICG 521
+ A++ G
Sbjct: 1204 WGALLDG 1210
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 116/221 (52%), Gaps = 7/221 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP +++++WTT+I + + +A +F M P+E T S ++ ACA + +G
Sbjct: 992 MPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIG 1051
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++H +++G D + GS+LV MYS GS L A VF +L +++L WN +I G A
Sbjct: 1052 KEVHMYTLQNGFVLDVYIGSALVDMYSKCGS-LERALLVFFNLPKKNLFCWNSIIEGLAA 1110
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G ++F++M E+E +KP+ TFVS+ C+ G V + + + ++
Sbjct: 1111 HGFAQEALKMFAKM-EMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNV 1169
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISG 216
MV L++K G + ++ +ME E + +W +++ G
Sbjct: 1170 EHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 473 IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAI 532
IK+ N D + + I ++ + +PN +YNA+ G+ +++
Sbjct: 797 IKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSL 856
Query: 533 EIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA 592
E++ + ++ V+P+ T+ +++ A S A ++L ++K+ + + L+D
Sbjct: 857 ELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH---IWKFGFGFHVKIQTTLIDF 913
Query: 593 YGRAGRLEEAYQIVQK--DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYI 650
Y GR+ EA ++ + + + AW T++SA R + A +M E N A+
Sbjct: 914 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKN---EATSN 970
Query: 651 LLSNIYIEEGKWEEARDCREKM 672
L N Y+ G E+A +M
Sbjct: 971 CLINGYMGLGNLEQAESLFNQM 992
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 220/393 (55%), Gaps = 6/393 (1%)
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A +FR IDD +N+MI + + ++ E+ + + + T +LK+C
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNV-MSFEEALCFYNEMMQRGN-EPDNFTYPCLLKAC 142
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
+ G+QIH V K + V N+L++MY CG++ + F + K +SWS
Sbjct: 143 TRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWS 202
Query: 416 SIIGTYKQNGMESEALELCKEMLAE-GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIK 474
S++ GM SE L L + M +E + + + +C+ A+N+G H F ++
Sbjct: 203 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 262
Query: 475 SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEI 534
+ ++ V +S++DMY KCG ++ + +F K N + Y+AMI G A HG+ + A+ +
Sbjct: 263 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 322
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
F+ + K G+ P+ V ++++L+ACSH+G +++ +F ML + K++P +EHY CLVD G
Sbjct: 323 FSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLG 382
Query: 595 RAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYIL 651
RAG LEEA + +Q + ++ WRT LS CR N ++G+ +A+++++L+ + Y+L
Sbjct: 383 RAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLL 442
Query: 652 LSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+SN+Y + W++ R ++A G+K+ PG S
Sbjct: 443 ISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 168/351 (47%), Gaps = 7/351 (1%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
+ T+I ++ S +A +N+M P+ +T+ LL+AC G QIHG +
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 69 RSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQ 128
+ GLE D F +SL+ MY G + + VF L + +W+ M+S A +G +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGE-MELSSAVFEKLESKTAASWSSMVSARAGMGMWSECL 218
Query: 129 RLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDL 185
LF M LK + VS L C+ G + M IHG + +E + +V +++VD+
Sbjct: 219 LLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDM 278
Query: 186 YAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVL 245
Y KCG + IF ME+++N +S++ISG ++ GE A+ F M K+ ++PD V
Sbjct: 279 YVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVY 338
Query: 246 SSTLRACVEIEDLNTGVQVHGQMIKNGH-QNDCFVASVLLTLYANFGGLRDAEKLFRRID 304
S L AC + G +V +M+K G + L+ L G L +A + + I
Sbjct: 339 VSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Query: 305 -DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
+K+ V W + L+ ++ Q QEL + +S LI+ L S
Sbjct: 399 IEKNDVIWRT-FLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYS 448
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 194/408 (47%), Gaps = 17/408 (4%)
Query: 136 EVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCG----- 190
EV + + LLK C + E Q+H K + S++ V AKC
Sbjct: 22 EVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSV--LAKCAHSGWE 79
Query: 191 -DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTL 249
++ IF +++ F ++++I GY EEA+ F+ +M ++ +PD L
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 250 RACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIV 309
+AC ++ + G Q+HGQ+ K G + D FV + L+ +Y G + + +F +++ K
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 310 AWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHS 369
+W+SM+ A A +G S + L + + T+L+ + + +++ L +C N L G IH
Sbjct: 200 SWSSMVSARAGMGMWSE-CLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 370 LVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESE 429
++++ +V +LV MY +CG + A F + +++ ++S++I +G
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 430 ALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDV--YVGSSI 487
AL + +M+ EG+ +++CS + G++ +K G + G +
Sbjct: 319 ALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG-CL 377
Query: 488 IDMYAKCGHMEDSKKVFDA-QVKPNEVIYNAMICGYAHHGQAKQAIEI 534
+D+ + G +E++ + + ++ N+VI+ + + +Q IE+
Sbjct: 378 VDLLGRAGLLEEALETIQSIPIEKNDVIWRT----FLSQCRVRQNIEL 421
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 188/350 (53%), Gaps = 3/350 (0%)
Query: 338 TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIG 397
++ LQ++ T +L+ CK + + G++IH+ + + + L+ +Y+ G +
Sbjct: 101 SSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQ 160
Query: 398 DAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCS 457
A F + +D W+++I Y Q G+E E L + +M I Y+ +CS
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 458 QLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNA 517
L + GK+ H IK ++ V S+++DMY KC D +VFD N + + +
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 518 MICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKY 577
+I GY +HG+ + ++ F +++ G PN VTFL +L+AC+H G ++ F M Y
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY 340
Query: 578 KIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSE---SAWRTLLSACRNHNNTKIGEKS 634
I+PE +HY+ +VD GRAGRL+EAY+ V K + W +LL ACR H N K+ E +
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELA 400
Query: 635 AKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
A K +EL+P++ +Y++ +N Y G E A R KM GVKKDPG S
Sbjct: 401 ATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYS 450
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 5/213 (2%)
Query: 43 TFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHD 102
T++VLL+ C + G +IH + G +++ L+ +Y+ +G +L+ A +F
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSG-DLQTAGILFRS 168
Query: 103 LLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV-- 160
L RDL+ WN MISG+ Q G ++ +M + + PD TF S+ + CS L +
Sbjct: 169 LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ-NRIVPDQYTFASVFRACSALDRLEH 227
Query: 161 -MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTV 219
+ H + K +++ +V SA+VD+Y KC S ++FD + ++ W+S+ISGY
Sbjct: 228 GKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGY 287
Query: 220 NNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRAC 252
+ + E + F+ M ++ +P+ L AC
Sbjct: 288 HGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 139/297 (46%), Gaps = 8/297 (2%)
Query: 134 MWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCG 190
+W GL+ + T+ LL+ C E + IH G + + ++ LYA G
Sbjct: 99 LWS-SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSG 157
Query: 191 DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLR 250
D+ + +F S++ +D W+++ISGY +E + + DM + R+ PDQ+ +S R
Sbjct: 158 DLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFR 217
Query: 251 ACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA 310
AC ++ L G + H MIK +++ V S L+ +Y D ++F ++ ++++
Sbjct: 218 ACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVIT 277
Query: 311 WNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG-RQIHS 369
W S+I + G+ S ++ +++ + + T + +L +C + + G +S
Sbjct: 278 WTSLISGYGYHGK-VSEVLKCFEKM-KEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYS 335
Query: 370 LVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSIIGTYKQNG 425
+ + A+V G++ +A++ + CK+ W S++G + +G
Sbjct: 336 MKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R+++ W +IS +++ G + ++ DMR P++YTF+ + RAC+ G +
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
H V+++ ++ + S+LV MY S+ D VF L R+++ W +ISG+ G
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKC-SSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 290
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV----MQIHGLASKFGAETDAVVS 179
V + F +M E EG +P+ TF+ +L C+ G V + + +G E +
Sbjct: 291 VSEVLKCFEKMKE-EGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHY 349
Query: 180 SAMVDLYAKCGDVSSCRK-IFDSMEEKDNFVWSSII 214
+AMVD + G + + + S ++ VW S++
Sbjct: 350 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 230/465 (49%), Gaps = 35/465 (7%)
Query: 254 EIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNS 313
++ N +++ +I +G F+ + ++ + A +LF ++ + ++ +NS
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNS 78
Query: 314 MILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK 373
+I A+ +++ ++L R + T + KSC + G+Q+H + K
Sbjct: 79 IIRAYTH-NSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCK 137
Query: 374 SSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMES----- 428
+ NAL+ MY + + DA K F ++ +D SW+S++ Y + G
Sbjct: 138 FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGL 197
Query: 429 --------------------------EALELCKEMLAEGITFTSYSLPLCISSCSQLLAI 462
EA++ +EM GI SL + SC+QL ++
Sbjct: 198 FHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSL 257
Query: 463 NVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGY 522
+GK H++A + G+ V +++I+MY+KCG + + ++F + + ++ MI GY
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGY 317
Query: 523 AHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPE 582
A+HG A AIE F +++ V PN +TFL +LSACSH G ++ L F +M Y+I+P+
Sbjct: 318 AYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPK 377
Query: 583 SEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMI 639
EHY CL+D RAG+LE A +I + W +LLS+CR N + + ++
Sbjct: 378 IEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLV 437
Query: 640 ELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
EL P D +Y+LL+NIY + GKWE+ R+ + +KK PG S
Sbjct: 438 ELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/511 (22%), Positives = 219/511 (42%), Gaps = 69/511 (13%)
Query: 139 GLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKI 198
G++ F+ L+ + E +I+ G + + + MVD K D+ ++
Sbjct: 5 GIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRL 64
Query: 199 FDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK-PDQHVLSSTLRACVEIED 257
F+ + + F+++SII YT N+ + + +K + ++ + PD+ ++C +
Sbjct: 65 FNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGS 124
Query: 258 LNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILA 317
G QVHG + K G + + L+ +Y F L DA K+F + ++D+++WNS++
Sbjct: 125 CYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSG 184
Query: 318 HAQLGQGSS------------------------------RSMQLLQELHRTTSLQIQGAT 347
+A+LGQ +M +E+ + ++ +
Sbjct: 185 YARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREM-QLAGIEPDEIS 243
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV 407
LI++L SC L G+ IH + T V NAL+ MYS+CG I A + F +
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 408 CKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ 467
KD SWS++I Y +G A+E EM + + +S+CS
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACS---------- 353
Query: 468 FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQ 527
HV + G + DM + D Q++P Y +I A G+
Sbjct: 354 -HVGMWQEGLRY--------FDMMRQ-----------DYQIEPKIEHYGCLIDVLARAGK 393
Query: 528 AKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESE-HY 586
++A+EI + + P+ + ++LS+C G ++ L M + +++PE +Y
Sbjct: 394 LERAVEITKTMP---MKPDSKIWGSLLSSCRTPGNLDVAL---VAMDHLVELEPEDMGNY 447
Query: 587 SCLVDAYGRAGRLEEAYQIVQKDGSESAWRT 617
L + Y G+ E+ ++ + +E+ +T
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKT 478
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 190/430 (44%), Gaps = 42/430 (9%)
Query: 38 RPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDAC 97
R E F L+ + W +I+ ++ GL + F + +V + + ++ A
Sbjct: 7 REVENYFIPFLQRVKSRNEWK---KINASIIIHGLSQSSFMVTKMVD-FCDKIEDMDYAT 62
Query: 98 CVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL 157
+F+ + ++ +N +I + +C V R++ ++ PD TF + K C++L
Sbjct: 63 RLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL 122
Query: 158 GEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSII 214
G Q+HG KFG V +A++D+Y K D+ K+FD M E+D W+S++
Sbjct: 123 GSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLL 182
Query: 215 SGYTVNNRGE-------------------------------EAVHFFKDMCKQRVKPDQH 243
SGY + + EA+ FF++M ++PD+
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRI 303
L S L +C ++ L G +H + G V + L+ +Y+ G + A +LF ++
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 304 DDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPA 363
+ KD+++W++MI +A G +++ E+ R ++ G T + +L +C +
Sbjct: 303 EGKDVISWSTMISGYAYHGNAHG-AIETFNEMQR-AKVKPNGITFLGLLSACSHVGMWQE 360
Query: 364 GRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSIIGTY 421
G + ++ + P + L+ + + G++ A + + K DS W S++ +
Sbjct: 361 GLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSC 420
Query: 422 KQNGMESEAL 431
+ G AL
Sbjct: 421 RTPGNLDVAL 430
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 165/349 (47%), Gaps = 41/349 (11%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNVGLQI 63
NV + ++I ++ +++ + R E P+ +TF + ++CA+ +G Q+
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 64 HGVLVRSG-------------------------------LERDKFAGSSLVYMYSNNGSN 92
HG L + G ERD + +SL+ Y+ G
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLG-Q 190
Query: 93 LRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK 152
++ A +FH +L++ +V+W MISG+ +G + F EM ++ G++PD + +S+L
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREM-QLAGIEPDEISLISVLP 249
Query: 153 CCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
C+ LG + IH A + G V +A++++Y+KCG +S ++F ME KD
Sbjct: 250 SCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVIS 309
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
WS++ISGY + A+ F +M + +VKP+ L AC + G++ + M+
Sbjct: 310 WSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR-YFDMM 368
Query: 270 KNGHQNDCFVA--SVLLTLYANFGGLRDAEKLFRRIDDK-DIVAWNSMI 315
+ +Q + + L+ + A G L A ++ + + K D W S++
Sbjct: 369 RQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M + +V+WT +IS + G +A F +M++ P+E + +L +CA +G
Sbjct: 201 MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
IH R G + ++L+ MYS G + A +F + +D+++W+ MISG+A
Sbjct: 261 KWIHLYAERRGFLKQTGVCNALIEMYSKCGV-ISQAIQLFGQMEGKDVISWSTMISGYAY 319
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGL------ASKFGAET 174
G+ F+EM + +KP+ TF+ LL CS +G M GL + E
Sbjct: 320 HGNAHGAIETFNEMQRAK-VKPNGITFLGLLSACSHVG--MWQEGLRYFDMMRQDYQIEP 376
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK-DNFVWSSIIS 215
++D+ A+ G + +I +M K D+ +W S++S
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 225 bits (574), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 157/586 (26%), Positives = 287/586 (48%), Gaps = 55/586 (9%)
Query: 148 VSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAK-----CGDVSSCRK----- 197
+ +L C T +V QIHG K G ++ +++ +V +A D + C
Sbjct: 16 IHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHV 75
Query: 198 -IFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIE 256
F E +D F+W+++I ++ +A+ M + V D+ LS L+AC +
Sbjct: 76 CSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLG 135
Query: 257 DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMIL 316
+ G+Q+HG + K G +D F+ + L+ LY G L + ++F R+ +D V++NSMI
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 317 AHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSV 376
+ + G S +EL ++++ LI+ + G I S +
Sbjct: 196 GYVKCGLIVSA-----RELFDLMPMEMK--NLISWNSMISGYAQTSDGVDIASKLFADMP 248
Query: 377 SHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS------------------------ 412
+ N+++ Y + G+I DA K D++ + D
Sbjct: 249 EKDLISWNSMIDGYVKHGRIEDA-KGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFD 307
Query: 413 --------SWSSIIGTYKQNGMESEALELCKEMLAEG-ITFTSYSLPLCISSCSQLLAIN 463
+++S++ Y QN EALE+ +M E + +L + + + +QL ++
Sbjct: 308 QMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLS 367
Query: 464 VGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYA 523
H++ ++ + +G ++IDMY+KCG ++ + VF+ + +NAMI G A
Sbjct: 368 KAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLA 427
Query: 524 HHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPES 583
HG + A ++ +E+ + P+ +TF+ +L+ACSH+G +++ L F LM K+KI+P
Sbjct: 428 IHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRL 487
Query: 584 EHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIE 640
+HY C+VD R+G +E A ++++ + ++ WRT L+AC +H + GE AK +I
Sbjct: 488 QHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLIL 547
Query: 641 LNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ +SY+LLSN+Y G W++ R R M + ++K PG SW+
Sbjct: 548 QAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 223/532 (41%), Gaps = 82/532 (15%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
W +I SH +A L M ++++ S++L+AC+ G+QIHG L
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 69 RSGLERDKFAGSSLVYMYSNNGS-----------NLRDACCV------------------ 99
++GL D F + L+ +Y G RD+
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 100 FHDLLE---RDLVAWNVMISGFAQVGDFC-MVQRLFSEMWEVEGLKPDNRTFVSLLKCCS 155
DL+ ++L++WN MISG+AQ D + +LF++M E D ++ S++
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPE-----KDLISWNSMIDGYV 263
Query: 156 TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIIS 215
G + GL D V + M+D YAK G V + +FD M +D ++S+++
Sbjct: 264 KHGRIEDAKGLFDVM-PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMA 322
Query: 216 GYTVNNRGEEAVHFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ 274
GY N EA+ F DM K+ + PD L L A ++ L+ + +H +++
Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY 382
Query: 275 NDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQE 334
+ L+ +Y+ G ++ A +F I++K I WN+MI A G G S + +L +
Sbjct: 383 LGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES-AFDMLLQ 441
Query: 335 LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECG 394
+ R SL+ T + +L +C + + G L+ + P L
Sbjct: 442 IER-LSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRL------------- 487
Query: 395 QIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE-GITFTSYSLPLCI 453
+ VDI+ + S ++EL K ++ E + +
Sbjct: 488 ---QHYGCMVDILSR------------------SGSIELAKNLIEEMPVEPNDVIWRTFL 526
Query: 454 SSCSQLLAINVGKQF--HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
++CS G+ H+ +++GYN YV S +MYA G +D ++V
Sbjct: 527 TACSHHKEFETGELVAKHLI-LQAGYNPSSYVLLS--NMYASFGMWKDVRRV 575
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 208/490 (42%), Gaps = 59/490 (12%)
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG-HQNDCFVASVLLTL-- 286
FK + + HVL S C +D+N Q+HG++IK G +N ++L
Sbjct: 4 FKSTMECSISSTIHVLGS----CKTSDDVN---QIHGRLIKTGIIKNSNLTTRIVLAFAS 56
Query: 287 -----YANFGGLRDAEK---LFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT 338
A+F E F + +D WN++I +H+ R LL L
Sbjct: 57 SRRPYLADFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSH--GKDPRQALLLLCLMLE 114
Query: 339 TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
+ + +L +LK+C + G QIH + K+ + + N L+ +Y +CG +G
Sbjct: 115 NGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGL 174
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC------ 452
+ + F + +D S++S+I Y + G+ A EL M E S++ +
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS 234
Query: 453 --ISSCSQLLAINVGKQFHVF-AIKSGY-----------------NHDVYVGSSIIDMYA 492
+ S+L A K + ++ GY DV +++ID YA
Sbjct: 235 DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYA 294
Query: 493 KCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG-VTPNQVTFL 551
K G + +K +FD + V YN+M+ GY + +A+EIF+ +EK + P+ T +
Sbjct: 295 KLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLV 354
Query: 552 AMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ--KD 609
+L A + G + +++ ++ K + + L+D Y + G ++ A + + ++
Sbjct: 355 IVLPAIAQLGRLSKAIDMHLYIVEK-QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN 413
Query: 610 GSESAWRTLLSACRNHNNTKIGEKSAKKMIE-----LNPSDHASYILLSNIYIEEGKWEE 664
S W ++ H +GE + +++ L P D +++ + N G +E
Sbjct: 414 KSIDHWNAMIGGLAIHG---LGESAFDMLLQIERLSLKPDD-ITFVGVLNACSHSGLVKE 469
Query: 665 ARDCREKMAK 674
C E M +
Sbjct: 470 GLLCFELMRR 479
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 130/288 (45%), Gaps = 44/288 (15%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+ V++ ++I +++ G + A +LF+ M + E N +++ ++ A + G
Sbjct: 182 MPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPM--EMKNLISWNSMISGYAQTS---DG 236
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+ I L E+D + +S++ Y +G + DA +F + RD+V W MI G+A+
Sbjct: 237 VDIASKLFADMPEKDLISWNSMIDGYVKHG-RIEDAKGLFDVMPRRDVVTWATMIDGYAK 295
Query: 121 VGDFCMVQRLFSEM-------------------WEVEGLK------------PDNRTFVS 149
+G + LF +M + +E L+ PD+ T V
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 150 LLKCCSTLGEV-----MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE 204
+L + LG + M ++ + +F + A++D+Y+KCG + +F+ +E
Sbjct: 356 VLPAIAQLGRLSKAIDMHLYIVEKQF--YLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN 413
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRAC 252
K W+++I G ++ GE A + + +KPD L AC
Sbjct: 414 KSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 226/422 (53%), Gaps = 7/422 (1%)
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
++H +++ G + + LL G + A ++F + I WN++ + +
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVR-N 87
Query: 323 QGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLV 382
Q S+ L +++ R ++ T ++K+ D G +H+ V+K +V
Sbjct: 88 QLPFESLLLYKKM-RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 383 GNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGI 442
LV MY + G++ A F + KD +W++ + Q G + ALE +M A+ +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 443 TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKK 502
F S+++ +S+C QL ++ +G++ + A K + ++ V ++ +DM+ KCG+ E ++
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 503 VFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGY 562
+F+ + N V ++ MI GYA +G +++A+ +FT ++ G+ PN VTFL +LSACSHAG
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 563 IEDTLNLFTLMLYK--YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRT 617
+ + F+LM+ ++P EHY+C+VD GR+G LEEAY+ ++K + W
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 618 LLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGV 677
LL AC H + +G+K A ++E P + ++LLSNIY GKW+ R KM K G
Sbjct: 387 LLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGT 446
Query: 678 KK 679
KK
Sbjct: 447 KK 448
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 187/374 (50%), Gaps = 12/374 (3%)
Query: 159 EVMQIHGLASKFG-AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGY 217
++ +IH + + G +E +++++ + +L GD+ R++FD M + F+W+++ GY
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVV-IGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 218 TVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDC 277
N E++ +K M V+PD+ ++A ++ D + G +H ++K G
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 278 FVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHR 337
VA+ L+ +Y FG L AE LF + KD+VAWN+ + Q G S+ +++ ++
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGN-SAIALEYFNKMC- 202
Query: 338 TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIG 397
++Q T++++L +C L G +I+ K + +V NA + M+ +CG
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 398 DAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCS 457
A F ++ ++ SWS++I Y NG EAL L M EG+ + +S+CS
Sbjct: 263 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Query: 458 QLLAINVGKQFHVFAIKSGYNH-----DVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPN 511
+N GK++ ++S + + Y + ++D+ + G +E++ + V+P+
Sbjct: 323 HAGLVNEGKRYFSLMVQSNDKNLEPRKEHY--ACMVDLLGRSGLLEEAYEFIKKMPVEPD 380
Query: 512 EVIYNAMICGYAHH 525
I+ A++ A H
Sbjct: 381 TGIWGALLGACAVH 394
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 139/278 (50%), Gaps = 5/278 (1%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M + W TL ++R ++ L+ MR + RP+E+T+ +++A + ++ G
Sbjct: 69 MHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCG 128
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+H +V+ G + LV MY G L A +F + +DLVAWN ++ Q
Sbjct: 129 FALHAHVVKYGFGCLGIVATELVMMYMKFG-ELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
G+ + F++M + ++ D+ T VS+L C LG + +I+ A K + + +
Sbjct: 188 TGNSAIALEYFNKMC-ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII 246
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V +A +D++ KCG+ + R +F+ M++++ WS++I GY +N EA+ F M +
Sbjct: 247 VENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG 306
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQN 275
++P+ L AC +N G + M+++ +N
Sbjct: 307 LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKN 344
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 152/344 (44%), Gaps = 39/344 (11%)
Query: 114 MISGFAQVGDFCMVQRLFSEM-------WEV-----------------------EGLKPD 143
++ +GD C +++F EM W G++PD
Sbjct: 49 LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPD 108
Query: 144 NRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFD 200
T+ ++K S LG+ +H K+G +V++ +V +Y K G++SS +F+
Sbjct: 109 EFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFE 168
Query: 201 SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNT 260
SM+ KD W++ ++ A+ +F MC V+ D + S L AC ++ L
Sbjct: 169 SMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEI 228
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
G +++ + K + V + L ++ G A LF + +++V+W++MI+ +A
Sbjct: 229 GEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAM 288
Query: 321 LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSH-- 378
G SR L + L+ T + +L +C + + G++ SL+++S+ +
Sbjct: 289 --NGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLE 346
Query: 379 PTLVGNA-LVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSIIGT 420
P A +V + G + +A++ + + D+ W +++G
Sbjct: 347 PRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGA 390
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 138/324 (42%), Gaps = 48/324 (14%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M +++V W ++ ++ G+ A + FN M + + +T +L AC +G
Sbjct: 170 MQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIG 229
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+I+ + ++ + ++ + M+ G N A +F ++ +R++V+W+ MI G+A
Sbjct: 230 EEIYDRARKEEIDCNIIVENARLDMHLKCG-NTEAARVLFEEMKQRNVVSWSTMIVGYAM 288
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS- 179
GD LF+ M + EGL+P+ TF+ +L CS G V + S D +
Sbjct: 289 NGDSREALTLFTTM-QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEP 347
Query: 180 -----SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
+ MVDL + G + EEA F K M
Sbjct: 348 RKEHYACMVDLLGRSGLL-------------------------------EEAYEFIKKM- 375
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLT-LYANFGGL 293
V+PD + + L AC D+ G +V +++ D VLL+ +YA G
Sbjct: 376 --PVEPDTGIWGALLGACAVHRDMILGQKVADVLVETA--PDIGSYHVLLSNIYAAAGKW 431
Query: 294 RDAEKL---FRRIDDKDIVAWNSM 314
+K+ R++ K + A++S+
Sbjct: 432 DCVDKVRSKMRKLGTKKVAAYSSV 455
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 237/466 (50%), Gaps = 40/466 (8%)
Query: 254 EIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNS 313
E+ ++ + V G + K+ H FV +V L+ + L A ++ R + + A NS
Sbjct: 21 EVRQIHAKLYVDGTL-KDDHLVGHFVKAVALS---DHKYLDYANQILDRSEKPTLFALNS 76
Query: 314 MILAHAQLGQGSSRSMQLLQE-LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVM 372
MI AH + +S + L L+ T+ ++++C G Q+H + +
Sbjct: 77 MIRAHCK-SPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTI 135
Query: 373 KSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC------------------------ 408
+ + V L+ +Y+E G + K F I C
Sbjct: 136 RRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARK 195
Query: 409 -------KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLA 461
+D +W+++I Y Q G EAL + M EG+ ++ +S+C+QL A
Sbjct: 196 LFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGA 255
Query: 462 INVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICG 521
++ G+ H + ++ V + ++++D+YAKCG ME + +VF + N +++ + G
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNG 315
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKP 581
A +G ++ +E+F++++++GVTPN VTF+++L CS G++++ F M ++ I+P
Sbjct: 316 LAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEP 375
Query: 582 ESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKM 638
+ EHY CLVD Y RAGRLE+A I+Q+ + W +LL A R + N ++G ++KKM
Sbjct: 376 QLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKM 435
Query: 639 IELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+EL ++H +Y+LLSNIY + W+ R+ M GV+K PG S
Sbjct: 436 LELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 180/369 (48%), Gaps = 49/369 (13%)
Query: 10 TTLISSHLRAGSVPKAFQLFNDMRVM----DERPNEYTFSVLLRACATPALWNVGLQIHG 65
++I +H ++ K+F + R++ D +P+ YT + L++AC + GLQ+HG
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYR--RILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHG 132
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNG--------------------SNLRDACC------- 98
+ +R G + D + L+ +Y+ G + + AC
Sbjct: 133 MTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVF 192
Query: 99 ---VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS 155
+F + ERD +AWN MISG+AQVG+ +F M ++EG+K + +S+L C+
Sbjct: 193 ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM-QLEGVKVNGVAMISVLSACT 251
Query: 156 TLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSS 212
LG + Q H + + +++ +VDLYAKCGD+ ++F MEEK+ + WSS
Sbjct: 252 QLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSS 311
Query: 213 IISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN- 271
++G +N GE+ + F M + V P+ S LR C + ++ G Q H ++N
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNE 370
Query: 272 -GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA-WNSMILA-----HAQLGQG 324
G + L+ LYA G L DA + +++ K A W+S++ A + +LG
Sbjct: 371 FGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVL 430
Query: 325 SSRSMQLLQ 333
+S+ M L+
Sbjct: 431 ASKKMLELE 439
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 184/409 (44%), Gaps = 39/409 (9%)
Query: 148 VSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGD--VSSCRKIFDSMEEK 205
++LL T EV QIH G D + V A + +I D E+
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCK--QRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
F +S+I + + E++ F++ + +KPD + ++ ++AC + TG+Q
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRD---------------------------- 295
VHG I+ G ND V + L++LYA G L
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 296 ---AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAIL 352
A KLF + ++D +AWN+MI +AQ+G+ SR + L + +++ G +I++L
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGE--SREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS 412
+C L GR HS + ++ + + LV +Y++CG + A + F + K+
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQFHVF 471
+WSS + NG + LEL M +G+T + + + CS + ++ G + F
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMI 519
+ G + ++D+YA+ G +ED+ + +KP+ ++++++
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 38/315 (12%)
Query: 140 LKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAETDAVVSSAMVDLYA--------- 187
LKPDN T L++ C+ L +Q+HG+ + G + D V + ++ LYA
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 188 ----------------------KCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEE 225
+CGDV RK+F+ M E+D W+++ISGY E
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 226 AVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLT 285
A++ F M + VK + + S L AC ++ L+ G H + +N + +A+ L+
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 286 LYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG 345
LYA G + A ++F +++K++ W+S + A G G + ++L L + +
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFG-EKCLELFS-LMKQDGVTPNA 341
Query: 346 ATLIAILKSCKNKSDLPAG-RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFV 404
T +++L+ C + G R S+ + + LV +Y+ G++ DA
Sbjct: 342 VTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQ 401
Query: 405 DIVCKDDSS-WSSII 418
+ K ++ WSS++
Sbjct: 402 QMPMKPHAAVWSSLL 416
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 11/221 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R+ + W +IS + + G +A +F+ M++ + N +L AC + G
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG 259
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
H + R+ ++ ++LV +Y+ G ++ A VF + E+++ W+ ++G A
Sbjct: 260 RWAHSYIERNKIKITVRLATTLVDLYAKCG-DMEKAMEVFWGMEEKNVYTWSSALNGLAM 318
Query: 121 --VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV----MQIHGLASKFGAET 174
G+ C+ LFS M + +G+ P+ TFVS+L+ CS +G V + ++FG E
Sbjct: 319 NGFGEKCL--ELFSLMKQ-DGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEP 375
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN-FVWSSII 214
+VDLYA+ G + I M K + VWSS++
Sbjct: 376 QLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 151/552 (27%), Positives = 266/552 (48%), Gaps = 49/552 (8%)
Query: 142 PDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDS 201
PD F+SL+ C + +H + G + V++ +V + IF +
Sbjct: 27 PDESHFISLIHACKDTASLRHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSIFRN 85
Query: 202 MEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
EE++ FV +++I G T N R E +V F M + VKPD+ L++ ++ G
Sbjct: 86 SEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLG 145
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR----RIDDKDIVAWNSMILA 317
+H +KN D FV L+ +YA G L+ A ++F RI + I+ WN +I
Sbjct: 146 RALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLI-- 203
Query: 318 HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
G R+ +++H T+L S+ ++S S
Sbjct: 204 -----NGYCRA----KDMHMATTL-------------------------FRSMPERNSGS 229
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEM 437
TL+ Y + G++ A + F + K+ SW+++I + Q G A+ EM
Sbjct: 230 WSTLIKG-----YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 438 LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM 497
L +G+ Y++ +S+CS+ A+ G + H + + +G D +G++++DMYAKCG +
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 498 EDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSAC 557
+ + VF + + + AMI G+A HG+ QAI+ F + +G P++V FLA+L+AC
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 558 SHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESA 614
++ ++ LN F M Y I+P +HY +VD GRAG+L EA+++V+ + +
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTT 464
Query: 615 WRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAK 674
W L AC+ H + E ++ ++EL+P SYI L + +G ++ R + K
Sbjct: 465 WAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQK 524
Query: 675 TGVKKDPGSSWL 686
++ G S++
Sbjct: 525 RIKERSLGWSYI 536
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 165/340 (48%), Gaps = 32/340 (9%)
Query: 11 TLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNV---------GL 61
+L+ + + G + AFQ+F +E P+ +L +WNV +
Sbjct: 166 SLVDMYAKTGQLKHAFQVF------EESPDRIKKESIL-------IWNVLINGYCRAKDM 212
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
+ L RS ER+ + S+L+ Y ++G L A +F + E+++V+W +I+GF+Q
Sbjct: 213 HMATTLFRSMPERNSGSWSTLIKGYVDSG-ELNRAKQLFELMPEKNVVSWTTLINGFSQT 271
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETDAVV 178
GD+ + EM E +GLKP+ T ++L CS LG ++IHG G + D +
Sbjct: 272 GDYETAISTYFEMLE-KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAI 330
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
+A+VD+YAKCG++ +F +M KD W+++I G+ V+ R +A+ F+ M
Sbjct: 331 GTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE 390
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLT-LYANFGGLRDAE 297
KPD+ V + L AC+ +++ G+ M + VL+ L G L +A
Sbjct: 391 KPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAH 450
Query: 298 KLFRRID-DKDIVAWNSMIL---AHAQLGQGSSRSMQLLQ 333
+L + + D+ W ++ AH + S S LL+
Sbjct: 451 ELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLE 490
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 193/420 (45%), Gaps = 46/420 (10%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
RN LI + + F M + +P+ TF +L++ + +G +
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFA 119
H +++ ++ D F SLV MY+ G L+ A VF + +R ++ WNV+I+G+
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTG-QLKHAFQVFEESPDRIKKESILIWNVLINGYC 207
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS 179
+ D M LF M E ++
Sbjct: 208 RAKDMHMATTLFRSM-------------------------------------PERNSGSW 230
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
S ++ Y G+++ +++F+ M EK+ W+++I+G++ E A+ + +M ++ +K
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
P+++ +++ L AC + L +G+++HG ++ NG + D + + L+ +YA G L A +
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 300 FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKS 359
F ++ KDI++W +MI A G+ +++Q +++ + + +A+L +C N S
Sbjct: 351 FSNMNHKDILSWTAMIQGWAVHGR-FHQAIQCFRQMMYSGE-KPDEVVFLAVLTACLNSS 408
Query: 360 DLPAGRQIHSLVMKSSVSHPTLVGNAL-VHMYSECGQIGDAFKAFVDIVCKDD-SSWSSI 417
++ G + PTL L V + G++ +A + ++ D ++W+++
Sbjct: 409 EVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 111/220 (50%), Gaps = 11/220 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP +NVV+WTTLI+ + G A + +M +PNEYT + +L AC+ G
Sbjct: 253 MPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG 312
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
++IHG ++ +G++ D+ G++LV MY+ G L A VF ++ +D+++W MI G+A
Sbjct: 313 IRIHGYILDNGIKLDRAIGTALVDMYAKCG-ELDCAATVFSNMNHKDILSWTAMIQGWAV 371
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G F + F +M G KPD F+++L C EV GL D +
Sbjct: 372 HGRFHQAIQCFRQMM-YSGEKPDEVVFLAVLTACLNSSEVDL--GLNFFDSMRLDYAIEP 428
Query: 181 AM------VDLYAKCGDVSSCRKIFDSME-EKDNFVWSSI 213
+ VDL + G ++ ++ ++M D W+++
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 253/487 (51%), Gaps = 60/487 (12%)
Query: 249 LRACVEIEDLNTGVQVHGQMIKNGHQN--DCFVASVLLTLYANFGGLRDAEKLFRRI--D 304
LR C L G ++H + +G + ++++ L YA+ G + A+KLF I
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 305 DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG 364
+KD V W +++ + ++ G + SM+L E+ R ++I +++ + C DL
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVN-SMKLFVEMRRK-RVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 365 RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT---- 420
+Q H + +K V V NAL+ MY +CG + + + F ++ K SW+ ++ T
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 421 ---------------------------YKQNGMESEALELCKEML---AEGITFTSYSLP 450
Y G E LEL EM+ G+ F +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVT---- 246
Query: 451 LC--ISSCSQLLAINVGKQFHVFAIK--------SGYNHDVYVGSSIIDMYAKCGHMEDS 500
LC +S+C+Q + VG+ HV+A+K + Y+ DV VG++++DMYAKCG+++ S
Sbjct: 247 LCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYD-DVMVGTALVDMYAKCGNIDSS 305
Query: 501 KKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHA 560
VF K N V +NA+ G A HG+ + I++F + + V P+ +TF A+LSACSH+
Sbjct: 306 MNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHS 364
Query: 561 GYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRT 617
G +++ F + + Y ++P+ +HY+C+VD GRAG +EEA ++++ +E +
Sbjct: 365 GIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGS 423
Query: 618 LLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGV 677
LL +C H +I E+ +++I+++P + IL+SN+Y+ EG+ + A R + K G+
Sbjct: 424 LLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGI 483
Query: 678 KKDPGSS 684
+K PG S
Sbjct: 484 RKIPGLS 490
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 167/372 (44%), Gaps = 52/372 (13%)
Query: 46 VLLRACATPALWNVGLQIHGVLVRSGLER--DKFAGSSLVYMYSNNGSNLRDACCVFHD- 102
+LLR CA + G ++H VL SGL++ + ++L Y+++G + A +F +
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSG-EMVTAQKLFDEI 69
Query: 103 -LLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST---LG 158
L E+D V W ++S F++ G +LF EM + ++ D+ + V L C+ LG
Sbjct: 70 PLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRR-KRVEIDDVSVVCLFGVCAKLEDLG 128
Query: 159 EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK------------- 205
Q HG+A K G T V +A++D+Y KCG VS ++IF+ +EEK
Sbjct: 129 FAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVV 188
Query: 206 ------------------DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHV-LS 246
+ W+ +++GY E + +M + V L
Sbjct: 189 KWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLC 248
Query: 247 STLRACVEIEDLNTGVQVHGQMIKN-------GHQNDCFVASVLLTLYANFGGLRDAEKL 299
S L AC + +L G VH +K +D V + L+ +YA G + + +
Sbjct: 249 SMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 300 FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKS 359
FR + +++V WN++ A G+G + + ++ R ++ T A+L +C +
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRM-VIDMFPQMIR--EVKPDDLTFTAVLSACSHSG 365
Query: 360 DLPAG-RQIHSL 370
+ G R HSL
Sbjct: 366 IVDEGWRCFHSL 377
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 174/412 (42%), Gaps = 57/412 (13%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+ ++ V WTTL+SS R G + + +LF +MR ++ + L CA
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNG------------------------------ 90
Q HGV V+ G+ ++L+ MY G
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 91 SNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSL 150
L VFH++ ER+ VAW VM++G+ G V L +EM G + T S+
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 151 LKCCSTLGEVMQ---IHGLASK----FGAET---DAVVSSAMVDLYAKCGDVSSCRKIFD 200
L C+ G ++ +H A K G E D +V +A+VD+YAKCG++ S +F
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 201 SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNT 260
M +++ W+++ SG ++ +G + F M ++ VKPD ++ L AC ++
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDE 369
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILA--- 317
G + + G + + ++ L G + +AE L R + V N ++L
Sbjct: 370 GWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP----VPPNEVVLGSLL 425
Query: 318 -----HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG 364
H ++ +L+Q T QI L++ + + +SD+ G
Sbjct: 426 GSCSVHGKVEIAERIKRELIQMSPGNTEYQI----LMSNMYVAEGRSDIADG 473
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 155/348 (44%), Gaps = 45/348 (12%)
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHP--TLVGNALVHMYSECGQIGDAFKAFVDIVC 408
+L+ C ++S L G+++H+++ S + + + NAL Y+ G++ A K F +I
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 409 --KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK 466
KD+ W++++ ++ + G+ +++L EM + + S+ C++L + +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 467 QFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF---------------DAQVK-- 509
Q H A+K G V V ++++DMY KCG + + K++F D VK
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 510 --------------PNEVIYNAMICGYAHHGQAKQAIEIFT-MLEKNGVTPNQVTFLAML 554
N V + M+ GY G ++ +E+ M+ + G N VT +ML
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 555 SACSHAGYIEDTLNLFTLMLYKYKIKPESEHY------SCLVDAYGRAGRLEEAYQIVQ- 607
SAC+ +G + + L K + E Y + LVD Y + G ++ + + +
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 608 -KDGSESAWRTLLSACRNHNNTKIGEKSAKKMI-ELNPSDHASYILLS 653
+ + W L S H ++ +MI E+ P D +LS
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLS 359
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 171/639 (26%), Positives = 296/639 (46%), Gaps = 109/639 (17%)
Query: 145 RTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKC------------ 189
R VS L C++ +V QIH K G +++ + ++++++YAKC
Sbjct: 42 RALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRD 101
Query: 190 --------------GDVSSCR-----KIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFF 230
G V S R K+FD M E+ ++++I GY NN+ EA+ F
Sbjct: 102 HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELF 161
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
++M + ++ L++ + AC + + + IK + FV++ LL +Y
Sbjct: 162 REMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC 221
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG------------------------QGSS 326
L+DA KLF + ++++V WN M+ +++ G G
Sbjct: 222 LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCL 281
Query: 327 RSMQLLQELHRTTSLQIQG-----ATLIAILKSCKNKSDLPAGRQIHSLVMK-------- 373
R QL + L T + G ++ +L + G Q+H ++K
Sbjct: 282 RKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDF 341
Query: 374 -----------------------SSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD 410
+SV NAL+ + + G + A + F KD
Sbjct: 342 LQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKD 401
Query: 411 DSSWSSIIGTYKQNGMESEALELCKEMLAEG-ITFTSYSLPLCISSCSQLLAINVGKQFH 469
SW+++I Y Q+ AL L +EM++ + + ++ S+ S L ++ GK+ H
Sbjct: 402 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 461
Query: 470 VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-------DAQVKPNEVIYNAMICGY 522
+ S + + ++IIDMYAKCG +E + +F + + P +NA+ICG
Sbjct: 462 DYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP----WNAIICGS 517
Query: 523 AHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPE 582
A HG AK A+++++ L+ + PN +TF+ +LSAC HAG +E F M + I+P+
Sbjct: 518 ATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD 577
Query: 583 SEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMI 639
+HY C+VD G+AGRLEEA ++++K ++ W LLSA R H N +I E +A ++
Sbjct: 578 IKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELA 637
Query: 640 ELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVK 678
++PS ++LSN+Y + G+WE+ RE+M V+
Sbjct: 638 AIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 124/582 (21%), Positives = 243/582 (41%), Gaps = 102/582 (17%)
Query: 48 LRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSN------------------- 88
L +CA+ G QIH +++SGL+ + + +S++ MY+
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 89 -----------NGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEV 137
L DA +F + ER V++ +I G+AQ + LF EM +
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 138 EGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSS 194
G+ + T +++ CS LG + + LA K E VS+ ++ +Y C +
Sbjct: 168 -GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKD 226
Query: 195 CRKIFDSMEEKDNFVWSSIISGYTV-------------------------------NNRG 223
RK+FD M E++ W+ +++GY+ N+
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQL 286
Query: 224 EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL 283
+EA+ ++ +M + +KP + ++ L A + G+Q+HG ++K G F+ + +
Sbjct: 287 DEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATI 346
Query: 284 LTLYA-------------------------------NFGGLRDAEKLFRRIDDKDIVAWN 312
+ YA G + A ++F + DKDI +WN
Sbjct: 347 IHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWN 406
Query: 313 SMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVM 372
+MI +AQ ++ L +E+ ++ ++ T++++ + + L G++ H +
Sbjct: 407 AMISGYAQ-SLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN 465
Query: 373 KSSVSHPTLVGNALVHMYSECGQIGDAFKAF---VDIVCKDDSSWSSIIGTYKQNGMESE 429
S++ + A++ MY++CG I A F +I S W++II +G
Sbjct: 466 FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKL 525
Query: 430 ALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSGYNHDVYVGSSII 488
AL+L ++ + I S + +S+C + +GK F G D+ ++
Sbjct: 526 ALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMV 585
Query: 489 DMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQAK 529
D+ K G +E++K++ VK + +I+ ++ HG +
Sbjct: 586 DLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 188/425 (44%), Gaps = 75/425 (17%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACA-TPALWNV 59
MP R+ V++TTLI + + +A +LF +MR + NE T + ++ AC+ +W+
Sbjct: 133 MPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC 192
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
+ + + ++ LE F ++L++MY L+DA +F ++ ER+LV WNVM++G++
Sbjct: 193 RM-LQSLAIKLKLEGRVFVSTNLLHMYCLCLC-LKDARKLFDEMPERNLVTWNVMLNGYS 250
Query: 120 QVGDFCMVQRLFSEMWE---------VEGLKPDNRT------FVSLLKCCSTLGEVM--- 161
+ G + LF ++ E ++G N+ + +L+C EVM
Sbjct: 251 KAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVD 310
Query: 162 ---------------QIHGLASKFGAETDAVVSSAMVDLYA------------------- 187
Q+HG K G + + + ++ YA
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 188 ------------KCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC- 234
K G V R++FD +KD F W+++ISGY + + A+H F++M
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQM-IKNGHQNDCFVASVLLTLYANFGGL 293
+VKPD + S A + L G + H + ND A++ + +YA G +
Sbjct: 431 SSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAI-IDMYAKCGSI 489
Query: 294 RDAEKLF---RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
A +F + I I WN++I A G + ++ L +L ++ ++ T +
Sbjct: 490 ETALNIFHQTKNISSSTISPWNAIICGSATHGH-AKLALDLYSDL-QSLPIKPNSITFVG 547
Query: 351 ILKSC 355
+L +C
Sbjct: 548 VLSAC 552
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 204/496 (41%), Gaps = 116/496 (23%)
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR 301
+ L S L +C D+ G Q+H +++K+G ++ ++ + +L +YA L DAE +FR
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 302 ---RID----------------------------DKDIVAWNSMILAHAQLGQGSSRSMQ 330
++D ++ V++ ++I +AQ Q S +M+
Sbjct: 101 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQW-SEAME 159
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMY 390
L +E+ R + + TL ++ +C + + R + SL +K + V L+HMY
Sbjct: 160 LFREM-RNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 391 SECGQIGDAFKAFVD-------------------------------IVCKDDSSWSSII- 418
C + DA K F + I KD SW ++I
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 419 GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN 478
G ++N ++ EAL EML G+ + + +S+ ++ + + G Q H +K G++
Sbjct: 279 GCLRKNQLD-EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 479 HDVYVGSSIIDMYA-------------------------------KCGHMEDSKKVFDAQ 507
++ ++II YA K G +E +++VFD
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 508 VKPNEVIYNAMICGYAHHGQAKQAIEIFT-MLEKNGVTPNQVTFLAMLSACSHAGYIE-- 564
+ +NAMI GYA + A+ +F M+ + V P+ +T +++ SA S G +E
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Query: 565 ----DTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK-----DGSESAW 615
D LN T I P + ++D Y + G +E A I + + S W
Sbjct: 458 KRAHDYLNFST-------IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPW 510
Query: 616 RTLLSACRNHNNTKIG 631
++ H + K+
Sbjct: 511 NAIICGSATHGHAKLA 526
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 159/357 (44%), Gaps = 42/357 (11%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+ +++V+W T+I LR + +A + +M +P+E LL A A + G
Sbjct: 265 ITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKG 324
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYS-------------------------------NN 89
LQ+HG +V+ G + F +++++ Y+ N
Sbjct: 325 LQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKN 384
Query: 90 GSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVS 149
G + A VF ++D+ +WN MISG+AQ + LF EM +KPD T VS
Sbjct: 385 GM-VEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVS 443
Query: 150 LLKCCSTLG---EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD 206
+ S+LG E + H + + +++A++D+YAKCG + + IF +
Sbjct: 444 VFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNIS 503
Query: 207 NFV---WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
+ W++II G + + A+ + D+ +KP+ L AC + G +
Sbjct: 504 SSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELG-K 562
Query: 264 VHGQMIKNGH--QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK-DIVAWNSMILA 317
+ + +K+ H + D ++ L G L +A+++ +++ K D++ W ++ A
Sbjct: 563 TYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSA 619
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 73/250 (29%)
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSK--- 501
T +L + SC+ + G+Q H +KSG + + Y+ +S+++MYAKC + D++
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 502 ----------------------------KVFDAQVKPNEVIYNAMICGYAHHGQAKQAIE 533
K+FD + + V Y +I GYA + Q +A+E
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 534 IFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESE--------H 585
+F + G+ N+VT ++SACSH G I D L +L + K+K E H
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAI---KLKLEGRVFVSTNLLH 216
Query: 586 YSCL-------------------------VDAYGRAGRLEEAY----QIVQKDGSESAWR 616
CL ++ Y +AG +E+A QI +KD +W
Sbjct: 217 MYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD--IVSWG 274
Query: 617 TLLSACRNHN 626
T++ C N
Sbjct: 275 TMIDGCLRKN 284
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 237/464 (51%), Gaps = 45/464 (9%)
Query: 262 VQVHGQMIKNG---HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAH 318
+Q+H ++++ H + L YA+ G +R + LF + D D+ + + I
Sbjct: 46 LQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTA 105
Query: 319 AQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSH 378
+ G + +Q L ++ + T ++LKSC KS G+ IH+ V+K +
Sbjct: 106 SINGLKDQAFLLYVQLL--SSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGI 159
Query: 379 PTLVGNALVHMYSECGQIGDAFKAF------------------------------VDIVC 408
V LV +Y++ G + A K F D +C
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMC 219
Query: 409 -KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFT-SYSLPLCISSCSQLLAINVGK 466
+D SW+ +I Y Q+G ++AL L +++LAEG ++ +S+CSQ+ A+ G+
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 467 QFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHG 526
HVF S +V V + +IDMY+KCG +E++ VF+ + + V +NAMI GYA HG
Sbjct: 280 WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Query: 527 QAKQAIEIFTMLEK-NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEH 585
++ A+ +F ++ G+ P +TF+ L AC+HAG + + + +F M +Y IKP+ EH
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEH 399
Query: 586 YSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELN 642
Y CLV GRAG+L+ AY+ ++ D W ++L +C+ H + +G++ A+ +I LN
Sbjct: 400 YGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLN 459
Query: 643 PSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ Y+LLSNIY G +E R M + G+ K+PG S +
Sbjct: 460 IKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTI 503
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 207/457 (45%), Gaps = 57/457 (12%)
Query: 12 LISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSG 71
+ SS L A S+P+ QL P +VL+ + + LQIH ++R
Sbjct: 1 MASSPLLATSLPQN-QLSTTATARFRLPPPEKLAVLIDKSQS---VDEVLQIHAAILRHN 56
Query: 72 L---ERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMIS-----GFAQVGD 123
L R L Y+++G +R + +FH ++ DL + I+ G
Sbjct: 57 LLLHPRYPVLNLKLHRAYASHG-KIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAF 115
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL-GEVMQIHGLASKFGAETDAVVSSAM 182
VQ L SE + P+ TF SLLK CST G+++ H L KFG D V++ +
Sbjct: 116 LLYVQLLSSE------INPNEFTFSSLLKSCSTKSGKLIHTHVL--KFGLGIDPYVATGL 167
Query: 183 VDLYAKCGDVSSCRKIFD-------------------------------SMEEKDNFVWS 211
VD+YAK GDV S +K+FD SM E+D W+
Sbjct: 168 VDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWN 227
Query: 212 SIISGYTVNNRGEEAVHFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
+I GY + +A+ F+ + + + KPD+ + + L AC +I L TG +H +
Sbjct: 228 VMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKS 287
Query: 271 NGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQ 330
+ + + V + L+ +Y+ G L +A +F KDIVAWN+MI +A G S +++
Sbjct: 288 SRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY-SQDALR 346
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHM 389
L E+ T LQ T I L++C + + G +I + + P + LV +
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 390 YSECGQIGDAFKAFVDIVCKDDSS-WSSIIGTYKQNG 425
GQ+ A++ ++ DS WSS++G+ K +G
Sbjct: 407 LGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 160/347 (46%), Gaps = 40/347 (11%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++ +T I++ G +AF L+ + + PNE+TFS LL++C+T + G IH
Sbjct: 94 DLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIH 149
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNG------------------------------SNLR 94
+++ GL D + + LV +Y+ G N+
Sbjct: 150 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 209
Query: 95 DACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
A +F + ERD+V+WNVMI G+AQ G LF ++ KPD T V+ L C
Sbjct: 210 AARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSAC 269
Query: 155 STLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWS 211
S +G + IH + V + ++D+Y+KCG + +F+ KD W+
Sbjct: 270 SQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWN 329
Query: 212 SIISGYTVNNRGEEAVHFFKDMCK-QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
++I+GY ++ ++A+ F +M ++P TL+AC +N G+++ M +
Sbjct: 330 AMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ 389
Query: 271 N-GHQNDCFVASVLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMI 315
G + L++L G L+ A + + ++ D D V W+S++
Sbjct: 390 EYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 7/220 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
M R++V+W +I + + G A LF + + +P+E T L AC+
Sbjct: 218 MCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALET 277
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G IH + S + + + L+ MYS GS L +A VF+D +D+VAWN MI+G+A
Sbjct: 278 GRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS-LEEAVLVFNDTPRKDIVAWNAMIAGYA 336
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETD 175
G RLF+EM + GL+P + TF+ L+ C+ G V + + ++G +
Sbjct: 337 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 396
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSII 214
+V L + G + + +M + D+ +WSS++
Sbjct: 397 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 242/457 (52%), Gaps = 35/457 (7%)
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLY-ANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQL 321
Q+H +IK G +D AS +L A+ + A +F RI+ K+ WN++I ++
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRS 102
Query: 322 GQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTL 381
+ L + S++ Q T ++ K+ GRQ+H +V+K + +
Sbjct: 103 SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSF 162
Query: 382 VGNALVHMYSECGQIGDAFKAFV-----DIVC--------------------------KD 410
+ N ++HMY CG + +A++ F+ D+V ++
Sbjct: 163 IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN 222
Query: 411 DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHV 470
SW+S+I + +NG +AL++ +EM + + +++ +++C+ L A G+ H
Sbjct: 223 GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHE 282
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQ 530
+ +++ + + V +++IDMY KCG +E+ VF+ K +N+MI G A++G ++
Sbjct: 283 YIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEER 342
Query: 531 AIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLV 590
A+++F+ LE++G+ P+ V+F+ +L+AC+H+G + F LM KY I+P +HY+ +V
Sbjct: 343 AMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMV 402
Query: 591 DAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHA 647
+ G AG LEEA +++ E W +LLSACR N ++ +++AK + +L+P +
Sbjct: 403 NVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETC 462
Query: 648 SYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
Y+LLSN Y G +EEA + R M + ++K+ G S
Sbjct: 463 GYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCS 499
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 186/405 (45%), Gaps = 47/405 (11%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
QIH L+++GL D S ++ + S++ A VF + ++ WN +I GF++
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRS 102
Query: 122 GDFCMVQRLFSEMW-EVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAV 177
M +F +M +KP T+ S+ K LG+ Q+HG+ K G E D+
Sbjct: 103 SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSF 162
Query: 178 VSSAMVDLY-------------------------------AKCGDVSSCRKIFDSMEEKD 206
+ + M+ +Y AKCG + + +FD M +++
Sbjct: 163 IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN 222
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHG 266
W+S+ISG+ N R ++A+ F++M ++ VKPD + S L AC + G +H
Sbjct: 223 GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHE 282
Query: 267 QMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSS 326
+++N + + V + L+ +Y G + + +F K + WNSMIL A G
Sbjct: 283 YIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGF-EE 341
Query: 327 RSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSL-----VMKSSVSHPTL 381
R+M L EL R + L+ + I +L +C + ++ + L +++ S+ H TL
Sbjct: 342 RAMDLFSELER-SGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTL 400
Query: 382 VGNALVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSIIGTYKQNG 425
+ N L G + +A ++ ++D+ WSS++ ++ G
Sbjct: 401 MVNVL----GGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIG 441
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 217/466 (46%), Gaps = 42/466 (9%)
Query: 146 TFVSLLKC-CSTLGEVMQIHGLASKFGAETDAVVSSAMVDLY-AKCGDVSSCRKIFDSME 203
T++ L+ CST+ E+ QIH K G +D V +S ++ A D++ +F +
Sbjct: 26 TYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRIN 85
Query: 204 EKDNFVWSSIISGYTVNNRGEEAVHFFKDMC--KQRVKPDQHVLSSTLRACVEIEDLNTG 261
K+ FVW++II G++ ++ E A+ F DM VKP + S +A + G
Sbjct: 86 HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDG 145
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQL 321
Q+HG +IK G ++D F+ + +L +Y G L +A ++F + D+VAWNSMI+ A+
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 322 G------------------------QGSSR------SMQLLQELHRTTSLQIQGATLIAI 351
G G R ++ + +E+ ++ G T++++
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQE-KDVKPDGFTMVSL 264
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD 411
L +C GR IH ++++ ++V AL+ MY +CG I + F K
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 412 SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
S W+S+I NG E A++L E+ G+ S S +++C+ ++ +F
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRL 384
Query: 472 AIKSGYNHDVYVG--SSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNAMICGYAHHGQA 528
+K Y + + + ++++ G +E+++ + + V+ + VI+++++ G
Sbjct: 385 -MKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNV 443
Query: 529 KQAIEIFTMLEKNGVTPNQVTFLAMLS-ACSHAGYIEDTLNLFTLM 573
+ A L+K + P++ +LS A + G E+ + LM
Sbjct: 444 EMAKRAAKCLKK--LDPDETCGYVLLSNAYASYGLFEEAVEQRLLM 487
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 175/373 (46%), Gaps = 42/373 (11%)
Query: 3 HRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE--RPNEYTFSVLLRACATPALWNVG 60
H+N W T+I R+ A +F DM +P T+ + +A G
Sbjct: 86 HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDG 145
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
Q+HG++++ GLE D F +++++MY G L +A +F ++ D+VAWN MI GFA+
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGC-LIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 121 VGDFCMVQRLFSEMWEVEG------------------------------LKPDNRTFVSL 150
G Q LF EM + G +KPD T VSL
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 151 LKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN 207
L C+ LG Q IH + E +++V +A++D+Y KCG + +F+ +K
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
W+S+I G N E A+ F ++ + ++PD L AC +++ + +
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF-R 383
Query: 268 MIKNGHQNDCFVA--SVLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMILAHAQLG-- 322
++K + + + ++++ + G L +AE L + + ++D V W+S++ A ++G
Sbjct: 384 LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNV 443
Query: 323 QGSSRSMQLLQEL 335
+ + R+ + L++L
Sbjct: 444 EMAKRAAKCLKKL 456
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 9/247 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RN V+W ++IS +R G A +F +M+ D +P+ +T LL ACA G
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
IH +VR+ E + ++L+ MY G + + VF ++ L WN MI G A
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGC-IEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETDA 176
G LFSE+ E GL+PD+ +F+ +L C+ GEV + + K+ E
Sbjct: 337 NGFEERAMDLFSEL-ERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSI 395
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
+ MV++ G + + +M E+D +WSS++S E A K C
Sbjct: 396 KHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK--CL 453
Query: 236 QRVKPDQ 242
+++ PD+
Sbjct: 454 KKLDPDE 460
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 145/326 (44%), Gaps = 45/326 (13%)
Query: 339 TSLQIQGATLIAILKS-CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIG 397
+S + G T + ++ + C +L +QIH+ ++K+ + T+ + ++ C
Sbjct: 18 SSGSLSGNTYLRLIDTQCSTMREL---KQIHASLIKTGLISDTVTASRVLAFC--CASPS 72
Query: 398 D---AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSL--PLC 452
D A+ F I K+ W++II + ++ A+ + +ML + L P
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 453 ISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDM---------------------- 490
+ +L G+Q H IK G D ++ ++++ M
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 491 ---------YAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKN 541
+AKCG ++ ++ +FD + N V +N+MI G+ +G+ K A+++F +++
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 542 GVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEE 601
V P+ T +++L+AC++ G E + ++ + + + S + L+D Y + G +EE
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV-RNRFELNSIVVTALIDMYCKCGCIEE 311
Query: 602 AYQIVQ--KDGSESAWRTLLSACRNH 625
+ + S W +++ N+
Sbjct: 312 GLNVFECAPKKQLSCWNSMILGLANN 337
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 241/455 (52%), Gaps = 24/455 (5%)
Query: 245 LSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA--NFGGLRDAEKLFRR 302
+ + ++ CV + Q+ + GH F+ S LL A FG L A ++FR
Sbjct: 6 METMIQKCVSFSQIK---QLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRY 62
Query: 303 IDDKDIVAWNSMIL-----AHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
I WN++I +H L RSM L Q + ++ T LK+C
Sbjct: 63 IPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSM-LQQSSSSSAICRVDALTCSFTLKACAR 121
Query: 358 KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSI 417
A Q+H + + +S +L+ L+ YS+ G + A+K F ++ +D +SW+++
Sbjct: 122 ALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNAL 181
Query: 418 IGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSG 476
I SEA+EL K M EGI + ++ + +CS L + G+ FH G
Sbjct: 182 IAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH------G 235
Query: 477 YNHD-VYVGSSIIDMYAKCGHMEDSKKVFDAQV-KPNEVIYNAMICGYAHHGQAKQAIEI 534
Y++D V V ++ IDMY+KCG ++ + +VF+ K + V +N MI G+A HG+A +A+EI
Sbjct: 236 YSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEI 295
Query: 535 FTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYG 594
F LE NG+ P+ V++LA L+AC HAG +E L++F M K ++ +HY C+VD
Sbjct: 296 FDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLS 354
Query: 595 RAGRLEEAYQIV---QKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYIL 651
RAGRL EA+ I+ W++LL A +++ ++ E +++++ E+ ++ ++L
Sbjct: 355 RAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVL 414
Query: 652 LSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
LSN+Y +G+W++ R+ M VKK PG S++
Sbjct: 415 LSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYI 449
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 143/300 (47%), Gaps = 10/300 (3%)
Query: 38 RPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDAC 97
R + T S L+ACA + Q+H + R GL D ++L+ YS NG +L A
Sbjct: 106 RVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNG-DLISAY 164
Query: 98 CVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTL 157
+F ++ RD+ +WN +I+G L+ M E EG++ T V+ L CS L
Sbjct: 165 KLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRM-ETEGIRRSEVTVVAALGACSHL 223
Query: 158 GEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV-WSSIISG 216
G+V + + + + + +VS+A +D+Y+KCG V ++F+ K + V W+++I+G
Sbjct: 224 GDVKEGENIFHGY-SNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 217 YTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQND 276
+ V+ A+ F + +KPD + L AC + G+ V M G + +
Sbjct: 283 FAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERN 342
Query: 277 CFVASVLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSM-----ILAHAQLGQGSSRSMQ 330
++ L + G LR+A + + D V W S+ I + ++ + +SR ++
Sbjct: 343 MKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIK 402
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 177/382 (46%), Gaps = 18/382 (4%)
Query: 149 SLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYA--KCGDVSSCRKIFDSMEEKD 206
++++ C + ++ Q+ G + + S +++ A GD+S +IF + +
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV------KPDQHVLSSTLRACVEIEDLNT 260
W++II G+ ++ A +++ M +Q + D S TL+AC +
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
Q+H Q+ + G D + + LL Y+ G L A KLF + +D+ +WN++I A
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALI-AGLV 186
Query: 321 LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPT 380
G +S +M+L + + T ++ T++A L +C + D+ G I +V
Sbjct: 187 SGNRASEAMELYKRME-TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNV---- 241
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDD-SSWSSIIGTYKQNGMESEALELCKEMLA 439
+V NA + MYS+CG + A++ F K +W+++I + +G ALE+ ++
Sbjct: 242 IVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLED 301
Query: 440 EGITFTSYSLPLCISSCSQLLAINVG-KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHME 498
GI S +++C + G F+ A K G ++ ++D+ ++ G +
Sbjct: 302 NGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLR 360
Query: 499 DSKKVF-DAQVKPNEVIYNAMI 519
++ + + P+ V++ +++
Sbjct: 361 EAHDIICSMSMIPDPVLWQSLL 382
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 156/345 (45%), Gaps = 29/345 (8%)
Query: 111 WNVMISGFAQVGDFCMVQRLFSEMWEVEGL-----KPDNRTFVSLLKCCSTL---GEVMQ 162
WN +I GFA + + M + + D T LK C+ + Q
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 163 IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNR 222
+H ++ G D+++ + ++D Y+K GD+ S K+FD M +D W+++I+G NR
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 223 GEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQND-CFVAS 281
EA+ +K M + ++ + + + L AC + D+ G+ I +G+ ND V++
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK-----EGENIFHGYSNDNVIVSN 245
Query: 282 VLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTS 340
+ +Y+ G + A ++F + K +V WN+MI A G+ + R++++ +L
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGE-AHRALEIFDKLE-DNG 303
Query: 341 LQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAF 400
++ + +A L +C++ + G + + + V +V + S G++ +A
Sbjct: 304 IKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAH 363
Query: 401 KAFVDIVCK-----DDSSWSSIIGT---YKQNGMESEALELCKEM 437
DI+C D W S++G Y M A KEM
Sbjct: 364 ----DIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEM 404
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 269/521 (51%), Gaps = 23/521 (4%)
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN-FVWSSIISGYTVNNRGEEAVHFFK 231
ET+ + + + + A + RK+FD ++D+ F+ +S+I Y + ++ ++
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYR 66
Query: 232 DMCKQR-VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
D+ K+ PD ++ ++C + G+Q+H Q+ + G D +V++ ++ +YA F
Sbjct: 67 DLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKF 126
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
G + A F + + V+W ++I + + G+ S +L ++ + I A +
Sbjct: 127 GKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLAS-KLFDQMPHVKDVVIYNAMMDG 185
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCK 409
+KS D+ + R++ ++H T++ ++H Y I A K F + +
Sbjct: 186 FVKS----GDMTSARRLFD-----EMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPER 236
Query: 410 DDSSWSSIIGTYKQNGMESEALELCKEMLAE-GITFTSYSLPLCISSCSQLLAINVGKQF 468
+ SW+++IG Y QN E + L +EM A + ++ + + S A+++G+
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 469 HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQA 528
H F + + V V ++I+DMY+KCG +E +K++FD + +NAMI GYA +G A
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 529 KQAIEIFT--MLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY 586
+ A+++F M+E+ P+++T LA+++AC+H G +E+ F +M + + + EHY
Sbjct: 357 RAALDLFVTMMIEEK---PDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHY 412
Query: 587 SCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNP 643
C+VD GRAG L+EA ++ E + LSAC + + + E+ KK +EL P
Sbjct: 413 GCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEP 472
Query: 644 SDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+ +Y+LL N+Y + +W++ + M K KK+ G S
Sbjct: 473 QNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCS 513
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 204/429 (47%), Gaps = 15/429 (3%)
Query: 112 NVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST---LGEVMQIHGLAS 168
N MI + + + L+ ++ + PDN TF +L K CS + + +Q+H
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVH 228
+FG D VS+ +VD+YAK G + R FD M + W+++ISGY + A
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F M VK D + ++ + V+ D+ + ++ +M + ++ Y
Sbjct: 166 LFDQM--PHVK-DVVIYNAMMDGFVKSGDMTSARRLFDEMT----HKTVITWTTMIHGYC 218
Query: 289 NFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATL 348
N + A KLF + ++++V+WN+MI + Q Q ++L QE+ TTSL T+
Sbjct: 219 NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQ-PQEGIRLFQEMQATTSLDPDDVTI 277
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
+++L + + L G H V + + V A++ MYS+CG+I A + F ++
Sbjct: 278 LSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE 337
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ- 467
K +SW+++I Y NG AL+L M+ E ++ I++C+ + G++
Sbjct: 338 KQVASWNAMIHGYALNGNARAALDLFVTMMIEEKP-DEITMLAVITACNHGGLVEEGRKW 396
Query: 468 FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNAMICGYAHHG 526
FHV + G N + ++D+ + G +++++ + + +PN +I ++ + +
Sbjct: 397 FHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYK 455
Query: 527 QAKQAIEIF 535
++A I
Sbjct: 456 DIERAERIL 464
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 194/418 (46%), Gaps = 15/418 (3%)
Query: 11 TLISSHLRAGSVPKAFQLFNDMRVMD-ERPNEYTFSVLLRACATPALWNVGLQIHGVLVR 69
++I ++L P +F L+ D+R P+ +TF+ L ++C+ GLQ+H + R
Sbjct: 47 SMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWR 106
Query: 70 SGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQR 129
G D + + +V MY+ G + A F ++ R V+W +ISG+ + G+ + +
Sbjct: 107 FGFCADMYVSTGVVDMYAKFG-KMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 130 LFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKC 189
LF +M V+ + N +K G++ L + +T + + M+ Y
Sbjct: 166 LFDQMPHVKDVVIYNAMMDGFVKS----GDMTSARRLFDEMTHKT-VITWTTMIHGYCNI 220
Query: 190 GDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM-CKQRVKPDQHVLSST 248
D+ + RK+FD+M E++ W+++I GY N + +E + F++M + PD + S
Sbjct: 221 KDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSV 280
Query: 249 LRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDI 308
L A + L+ G H + + V + +L +Y+ G + A+++F + +K +
Sbjct: 281 LPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQV 340
Query: 309 VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIH 368
+WN+MI +A G + + + +I T++A++ +C + + GR+
Sbjct: 341 ASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEI---TMLAVITACNHGGLVEEGRKWF 397
Query: 369 SLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDD----SSWSSIIGTYK 422
++ + ++ +V + G + +A ++ + + SS+ S G YK
Sbjct: 398 HVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYK 455
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 20/227 (8%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
MP RN+V+W T+I + + + +LF +M+ P++ T +L A + ++
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G H + R L++ ++++ MYS G + A +F ++ E+ + +WN MI G+A
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE-IEKAKRIFDEMPEKQVASWNAMIHGYA 351
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---------EVMQIHGLASKF 170
G+ LF M E KPD T ++++ C+ G VM+ GL +K
Sbjct: 352 LNGNARAALDLFVTMMIEE--KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKI 409
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISG 216
MVDL + G + + +M E + + SS +S
Sbjct: 410 EH------YGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSA 450
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 180/305 (59%), Gaps = 4/305 (1%)
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT 443
N ++ Y GQ+ +A K F + +D SW+++I + + G + EAL +EM G+
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 444 FTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
++ +++C+ L A++ G H + + + ++V V +S+ID+Y +CG +E +++V
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 504 FDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI 563
F K V +N++I G+A +G A +++ F +++ G P+ VTF L+ACSH G +
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 564 EDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLS 620
E+ L F +M Y+I P EHY CLVD Y RAGRLE+A ++VQ +E +LL+
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 621 ACRNH-NNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKK 679
AC NH NN + E+ K + +LN H++Y++LSN+Y +GKWE A R KM G+KK
Sbjct: 384 ACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKK 443
Query: 680 DPGSS 684
PG S
Sbjct: 444 QPGFS 448
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 184/387 (47%), Gaps = 44/387 (11%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACA--TPALWNVGLQIH 64
V+WT+ I+ R G + +A + F+DM + PN TF LL C T +G +H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 65 GVLVRSGLERDK-FAGSSLVYMYSNNG------------------------------SNL 93
G + GL+R+ G++++ MYS G +
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 94 RDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC 153
+A +F + ERDL++W MI+GF + G F EM ++ G+KPD ++ L
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM-QISGVKPDYVAIIAALNA 215
Query: 154 CSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
C+ LG + + +H + + VS++++DLY +CG V R++F +ME++ W
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
+S+I G+ N E++ +F+ M ++ KPD + L AC + + G++ + Q++K
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIMK 334
Query: 271 NGHQNDCFVA--SVLLTLYANFGGLRDAEKLFRRIDDK-DIVAWNSMILAHAQLGQGSSR 327
++ + L+ LY+ G L DA KL + + K + V S++ A + G
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVL 394
Query: 328 SMQLLQELHRTTSLQIQGATLIAILKS 354
+ +L++ L T L ++ + IL +
Sbjct: 395 AERLMKHL---TDLNVKSHSNYVILSN 418
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 40/355 (11%)
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ-----V 264
W+S I+ T N R EA F DM V+P+ + L C D +G + +
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEALGDLL 95
Query: 265 HGQMIKNG-HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ 323
HG K G +N V + ++ +Y+ G + A +F ++DK+ V WN+MI + + GQ
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 324 GSSRSMQLLQELHRT------------------------TSLQIQGA-----TLIAILKS 354
+ + + R +QI G +IA L +
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
C N L G +H V+ + V N+L+ +Y CG + A + F ++ + SW
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-KQFHVFAI 473
+S+I + NG E+L ++M +G + + +++CS + + G + F +
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 474 KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQ 527
+ + ++D+Y++ G +ED+ K+ + +KPNEV+ +++ ++HG
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 151/333 (45%), Gaps = 45/333 (13%)
Query: 109 VAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS-------TLGEVM 161
V+W I+ + G + FS+M + G++P++ TF++LL C LG+++
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDM-TLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 162 QIHGLASKFG--------------------------------AETDAVVSSAMVDLYAKC 189
HG A K G + ++V + M+D Y +
Sbjct: 96 --HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 190 GDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTL 249
G V + K+FD M E+D W+++I+G+ EEA+ +F++M VKPD + + L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 250 RACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIV 309
AC + L+ G+ VH ++ +N+ V++ L+ LY G + A ++F ++ + +V
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 310 AWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG-RQIH 368
+WNS+I+ A G + S+ +++ + T L +C + + G R
Sbjct: 274 SWNSVIVGFAANGN-AHESLVYFRKMQE-KGFKPDAVTFTGALTACSHVGLVEEGLRYFQ 331
Query: 369 SLVMKSSVSHPTLVGNALVHMYSECGQIGDAFK 401
+ +S LV +YS G++ DA K
Sbjct: 332 IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 10/215 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R++++WT +I+ ++ G +A F +M++ +P+ L AC + G
Sbjct: 166 MPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFG 225
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
L +H ++ + + +SL+ +Y G + A VF+++ +R +V+WN +I GFA
Sbjct: 226 LWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC-VEFARQVFYNMEKRTVVSWNSVIVGFAA 284
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS- 179
G+ F +M E +G KPD TF L CS +G V + GL + D +S
Sbjct: 285 NGNAHESLVYFRKMQE-KGFKPDAVTFTGALTACSHVGLVEE--GLRYFQIMKCDYRISP 341
Query: 180 -----SAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
+VDLY++ G + K+ SM K N V
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEV 376
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 43/231 (18%)
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN--VGKQFHV 470
SW+S I +NG +EA + +M G+ + +S C + + +G H
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 471 FAIKSGYNHD-VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAK 529
+A K G + + V VG++II MY+K G + ++ VFD N V +N MI GY GQ
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 530 QAIEIF-TMLEKN------------------------------GVTPNQVTFLAMLSACS 558
A ++F M E++ GV P+ V +A L+AC+
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACT 217
Query: 559 HAGYIEDTLNLFTLMLYKYKIKPESEH----YSCLVDAYGRAGRLEEAYQI 605
+ G + F L +++Y + + ++ + L+D Y R G +E A Q+
Sbjct: 218 NLGALS-----FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 232/444 (52%), Gaps = 29/444 (6%)
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRD----AEKLFRRIDDKDIVAWNSMIL---- 316
H I +G + + S LLT + + L A +F I+ + +++MI
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 317 -AHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS 375
+ LG M +E S ++A LK+C G+QIH V+K+
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACF----FSVGKQIHCWVVKNG 146
Query: 376 V----SHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEAL 431
V SH V ++ +Y E + DA K F +I D W ++ Y + G+ SE L
Sbjct: 147 VFLSDSH---VQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 432 ELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGY-NHDVYVGSSIIDM 490
E+ +EML +G+ +S+ +++C+Q+ A+ GK H F K + DV+VG++++DM
Sbjct: 204 EVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDM 263
Query: 491 YAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK-NGVTPNQVT 549
YAKCG +E + +VF + N + A+I GYA +G AK+A+ LE+ +G+ P+ V
Sbjct: 264 YAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVV 323
Query: 550 FLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK- 608
L +L+AC+H G++E+ ++ M +Y+I P+ EHYSC+VD RAGRL++A +++K
Sbjct: 324 LLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKM 383
Query: 609 --DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNP----SDHASYILLSNIYIEEGKW 662
S W LL+ CR H N ++GE + K +++L + A+ + LSNIY +
Sbjct: 384 PMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRN 443
Query: 663 EEARDCREKMAKTGVKKDPGSSWL 686
EA R + + GV+K PG S L
Sbjct: 444 PEASKVRGMIEQRGVRKTPGWSVL 467
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 18/292 (6%)
Query: 36 DERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGL-ERDKFAGSSLVYMYSNNGSNLR 94
D P+ TF L+ AC ++VG QIH +V++G+ D + ++ +Y + L
Sbjct: 111 DIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVED-KLLL 169
Query: 95 DACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
DA VF ++ + D+V W+V+++G+ + G +F EM V+GL+PD + + L C
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML-VKGLEPDEFSVTTALTAC 228
Query: 155 STLGEVMQ---IHGLASKFG-AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
+ +G + Q IH K E+D V +A+VD+YAKCG + + ++F + ++ F W
Sbjct: 229 AQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSW 288
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQR-VKPDQHVLSSTLRACVEIEDLNTGVQVHGQM- 268
+++I GY ++A+ + + ++ +KPD VL L AC L G + M
Sbjct: 289 AALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENME 348
Query: 269 ----IKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA-WNSMI 315
I H++ S ++ L G L DA L ++ K + + W +++
Sbjct: 349 ARYEITPKHEH----YSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 396
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 176/369 (47%), Gaps = 17/369 (4%)
Query: 64 HGVLVRSGLERDKFAGSSLVYMY---SNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
H + + GL R+ +A S L+ + N + A +F + + ++ MI ++
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 121 VGDFCMVQRLFSEMW--EVEGLKPDNRTF----VSLLKCCS-TLGEVMQIHGLASKFGA- 172
+ R F M E E + P TF V+ LK C ++G+ QIH K G
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGK--QIHCWVVKNGVF 148
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKD 232
+D+ V + ++ +Y + + RK+FD + + D W +++GY G E + F++
Sbjct: 149 LSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFRE 208
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH-QNDCFVASVLLTLYANFG 291
M + ++PD+ +++ L AC ++ L G +H + K ++D FV + L+ +YA G
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCG 268
Query: 292 GLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
+ A ++F+++ +++ +W ++I +A G + ++M L+ L R ++ L+ +
Sbjct: 269 CIETAVEVFKKLTRRNVFSWAALIGGYAAYGY-AKKAMTCLERLEREDGIKPDSVVLLGV 327
Query: 352 LKSCKNKSDLPAGRQ-IHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD 410
L +C + L GR + ++ + ++ + +V + G++ DA + K
Sbjct: 328 LAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKP 387
Query: 411 DSS-WSSII 418
+S W +++
Sbjct: 388 LASVWGALL 396
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 10/254 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P +VV W L++ ++R G + ++F +M V P+E++ + L ACA G
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQG 237
Query: 61 LQIHG-VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
IH V +S +E D F G++LV MY+ G + A VF L R++ +W +I G+A
Sbjct: 238 KWIHEFVKKKSWIESDVFVGTALVDMYAKCGC-IETAVEVFKKLTRRNVFSWAALIGGYA 296
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS 179
G + +G+KPD+ + +L C+ G + + + A +
Sbjct: 297 AYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPK 356
Query: 180 ----SAMVDLYAKCGDVSSCRKIFDSMEEKD-NFVWSSIISGYTVNNR---GEEAVHFFK 231
S +VDL + G + + + M K VW ++++G + GE AV
Sbjct: 357 HEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLL 416
Query: 232 DMCKQRVKPDQHVL 245
D+ K V+ ++ L
Sbjct: 417 DLEKGNVEEEEAAL 430
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/631 (24%), Positives = 289/631 (45%), Gaps = 114/631 (18%)
Query: 164 HGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRG 223
H + K G+ AV S+ +V+LY+K G + R +FD M E++ + W+++I+ Y N
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 224 EEAVHFFK-DMC-----------------------------------KQRVKPDQHVLSS 247
+EA F+ D C K + D +++
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 248 TLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF------- 300
++ ++ ++ G Q+HG ++K G+ F S L+ +Y+ G ++ +F
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 301 ---------------------------RRIDDKDIVAWNSMILAHAQLG-QGSSRSMQLL 332
R + D ++WN++I +AQ G + + M +
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 333 QELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSE 392
E L+ + A+L + L G+++H+ V+K+ V + +V +Y +
Sbjct: 251 ME---ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCK 307
Query: 393 CGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEA---------------------- 430
CG + A A + + S SS+I Y G EA
Sbjct: 308 CGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY 367
Query: 431 ---------LELCKEMLA-EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD 480
LEL + +A E T S + + +CS + GK+ H ++++G D
Sbjct: 368 LNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMD 427
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK 540
+ ++ +DMY+KCG++E ++++FD+ + + V+YNAMI G AHHG ++ + F + +
Sbjct: 428 KKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE 487
Query: 541 NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLE 600
G P+++TF+A+LSAC H G + + F M+ Y I PE+ HY+C++D YG+A RL+
Sbjct: 488 GGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLD 547
Query: 601 EAYQI------VQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSN 654
+A ++ V+KD L+AC + NT++ ++ +K++ + S+ + YI ++N
Sbjct: 548 KAIELMEGIDQVEKDA--VILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIAN 605
Query: 655 IYIEEGKWEEARDCREKMAKTGVKKDPGSSW 685
Y G+W+E + R +M ++ G SW
Sbjct: 606 AYASSGRWDEMQRIRHQMRGKELEIFSGCSW 636
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 235/510 (46%), Gaps = 84/510 (16%)
Query: 4 RNVVTWTTLISSHLRA-GSVPKAFQLFNDMRVMDERP---NEYTFSVLLRACATPALWNV 59
R+++T+ TL+S + G +A ++F +M ++ +++T + +++ A
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGS-----NLRDACCV-FHDLLER------- 106
G Q+HGVLV++G + KFA SSL++MYS G N+ + CV F D + R
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 107 --------------------DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRT 146
D ++WN +I+G+AQ G ++ M E GLK D +
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM-EENGLKWDEHS 262
Query: 147 FVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVS---------- 193
F ++L S+L + ++H K G+ ++ VSS +VD+Y KCG++
Sbjct: 263 FGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG 322
Query: 194 ---------------------SCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKD 232
+++FDS+ EK+ VW+++ GY +N R ++V
Sbjct: 323 FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY-LNLRQPDSVLELAR 381
Query: 233 --MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
+ + PD V+ S L AC + G ++HG ++ G D + + + +Y+
Sbjct: 382 AFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKC 441
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
G + AE++F ++D V +N+MI A G ++S Q +++ + T +A
Sbjct: 442 GNVEYAERIFDSSFERDTVMYNAMIAGCAHHGH-EAKSFQHFEDM-TEGGFKPDEITFMA 499
Query: 351 ILKSCKNKSDLPAGRQ-IHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF--VDIV 407
+L +C+++ + G + S++ ++S T ++ +Y + ++ A + +D V
Sbjct: 500 LLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQV 559
Query: 408 CKDDSSWSSIIGTYKQNGMESEALELCKEM 437
KD + I+G + ++ EL KE+
Sbjct: 560 EKD----AVILGAFLNACSWNKNTELVKEV 585
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 9/231 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER-PNEYTFSVLLRACATPALWNV 59
+ +N+V WT + +L +L + P+ +L AC+ A
Sbjct: 352 LSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEP 411
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G +IHG +R+G+ DK ++ V MYS G N+ A +F ERD V +N MI+G A
Sbjct: 412 GKEIHGHSLRTGILMDKKLVTAFVDMYSKCG-NVEYAERIFDSSFERDTVMYNAMIAGCA 470
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETD 175
G + F +M E G KPD TF++LL C G V++ + + +
Sbjct: 471 HHGHEAKSFQHFEDMTE-GGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPE 529
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSME--EKDNFVWSSIISGYTVNNRGE 224
+ M+DLY K + ++ + ++ EKD + + ++ + N E
Sbjct: 530 TGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTE 580
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 198/353 (56%), Gaps = 15/353 (4%)
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVD 405
+ L AI S K+ GRQIH+LV K + + +LV YS G + A + F +
Sbjct: 66 SVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDE 125
Query: 406 IVCKDDSS-WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINV 464
K + W+++I Y +N EA+EL K M AE I + + +S+C+ L A+ +
Sbjct: 126 TPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQM 185
Query: 465 GKQFHVFAIKSGYN--HDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGY 522
G++ + +IK D+ + +S+++MY K G E ++K+FD ++ + Y +MI GY
Sbjct: 186 GEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGY 245
Query: 523 AHHGQAKQAIEIFTML------EKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
A +GQA++++E+F + + +TPN VTF+ +L ACSH+G +E+ F M+
Sbjct: 246 ALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMD 305
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEK 633
Y +KP H+ C+VD + R+G L++A++ + + + WRTLL AC H N ++GE+
Sbjct: 306 YNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEE 365
Query: 634 SAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+++ EL+ Y+ LSNIY +G W+E R+++ K ++ PG SW+
Sbjct: 366 VQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWI 415
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 137/317 (43%), Gaps = 26/317 (8%)
Query: 43 TFSVLLR---ACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCV 99
+FSVL + A A G QIH ++ + G +SLV YS+ G ++ A V
Sbjct: 64 SFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVG-DVDYARQV 122
Query: 100 FHDLLER-DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG 158
F + E+ ++V W MIS + + + LF M E E ++ D L C+ LG
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM-EAEKIELDGVIVTVALSACADLG 181
Query: 159 EV-----MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSI 213
V + + K D + ++++++Y K G+ RK+FD KD ++S+
Sbjct: 182 AVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSM 241
Query: 214 ISGYTVNNRGEEAVHFFKDM------CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
I GY +N + +E++ FK M + P+ L AC + G +
Sbjct: 242 IFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKS 301
Query: 268 MIK--NGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK-DIVAWNSMILA-----HA 319
MI N + ++ L+ G L+DA + ++ K + V W +++ A +
Sbjct: 302 MIMDYNLKPREAHFG-CMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNV 360
Query: 320 QLGQGSSRSMQLLQELH 336
+LG+ R + L H
Sbjct: 361 ELGEEVQRRIFELDRDH 377
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 105/238 (44%), Gaps = 16/238 (6%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
+N+V WT +IS++ + +A +LF M + +V L ACA +G +I
Sbjct: 130 QNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEI 189
Query: 64 HGVLVRSG--LERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
+ ++ L D +SL+ MY +G + A +F + + +D+ + MI G+A
Sbjct: 190 YSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEK-ARKLFDESMRKDVTTYTSMIFGYALN 248
Query: 122 GDFCMVQRLFSEMWEVEG-----LKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGA 172
G LF +M ++ + P++ TF+ +L CS G V + + +
Sbjct: 249 GQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNL 308
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN-FVWSSIISGYTVNNR---GEEA 226
+ MVDL+ + G + + + M K N +W +++ +++ GEE
Sbjct: 309 KPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEV 366
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 229/444 (51%), Gaps = 29/444 (6%)
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRD----AEKLFRRIDDKDIVAWNSMIL---- 316
H I +G + + S LLT + + L A +F I+ + +++MI
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 317 -AHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS 375
+ LG M +E T S ++A LK+C G+QIH V+K+
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACF----FSVGKQIHCWVVKNG 146
Query: 376 V----SHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEAL 431
V H V ++ +Y E + DA K F +I D W ++ Y + G+ SE L
Sbjct: 147 VFLSDGH---VQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 432 ELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGY-NHDVYVGSSIIDM 490
E+ KEML GI +S+ +++C+Q+ A+ GK H F K + DV+VG++++DM
Sbjct: 204 EVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDM 263
Query: 491 YAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK-NGVTPNQVT 549
YAKCG +E + +VF+ + N + A+I GYA +G AK+A +E+ +G+ P+ V
Sbjct: 264 YAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV 323
Query: 550 FLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK- 608
L +L+AC+H G++E+ + M +Y I P+ EHYSC+VD RAGRL++A +++K
Sbjct: 324 LLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKM 383
Query: 609 --DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNP----SDHASYILLSNIYIEEGKW 662
S W LL+ CR H N ++GE + + +++L + A+ + LSNIY +
Sbjct: 384 PMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRN 443
Query: 663 EEARDCREKMAKTGVKKDPGSSWL 686
EA R + + G++K PG S L
Sbjct: 444 PEAFKVRGMIEQRGIRKTPGWSLL 467
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 145/292 (49%), Gaps = 18/292 (6%)
Query: 36 DERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGL-ERDKFAGSSLVYMYSNNGSNLR 94
D P+ TF L+ AC ++VG QIH +V++G+ D + ++ +Y + L
Sbjct: 111 DITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVED-KLLF 169
Query: 95 DACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
DA VF ++ + D+V W+V+++G+ + G +F EM V G++PD + + L C
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML-VRGIEPDEFSVTTALTAC 228
Query: 155 STLGEVMQ---IHGLA-SKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
+ +G + Q IH K E+D V +A+VD+YAKCG + + ++F+ + ++ F W
Sbjct: 229 AQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSW 288
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQR-VKPDQHVLSSTLRACVEIEDLNTGVQVHGQM- 268
+++I GY ++A + ++ +KPD VL L AC L G + M
Sbjct: 289 AALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENME 348
Query: 269 ----IKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA-WNSMI 315
I H++ S ++ L G L DA L ++ K + + W +++
Sbjct: 349 ARYGITPKHEH----YSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 151/317 (47%), Gaps = 17/317 (5%)
Query: 64 HGVLVRSGLERDKFAGSSLVYMY---SNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
H + + GL R+ +A S L+ + N + A +F + + ++ MI ++
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 121 VGDFCMVQRLFSEMW--EVEGLKPDNRTF----VSLLKCCS-TLGEVMQIHGLASKFGA- 172
+ R F M E E + P TF V+ LK C ++G+ QIH K G
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGK--QIHCWVVKNGVF 148
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKD 232
+D V + ++ +Y + + RK+FD + + D W +++GY G E + FK+
Sbjct: 149 LSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKE 208
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH--QNDCFVASVLLTLYANF 290
M + ++PD+ +++ L AC ++ L G +H + +K ++D FV + L+ +YA
Sbjct: 209 MLVRGIEPDEFSVTTALTACAQVGALAQGKWIH-EFVKKKRWIESDVFVGTALVDMYAKC 267
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
G + A ++F ++ +++ +W ++I +A G + ++ L + R ++ L+
Sbjct: 268 GCIETAVEVFEKLTRRNVFSWAALIGGYAAYGY-AKKATTCLDRIEREDGIKPDSVVLLG 326
Query: 351 ILKSCKNKSDLPAGRQI 367
+L +C + L GR +
Sbjct: 327 VLAACAHGGFLEEGRTM 343
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 10/281 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P +VV W L++ ++R G + ++F +M V P+E++ + L ACA G
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQG 237
Query: 61 LQIHG-VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
IH V + +E D F G++LV MY+ G + A VF L R++ +W +I G+A
Sbjct: 238 KWIHEFVKKKRWIESDVFVGTALVDMYAKCGC-IETAVEVFEKLTRRNVFSWAALIGGYA 296
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETD 175
G + +G+KPD+ + +L C+ G + + + + +++G
Sbjct: 297 AYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPK 356
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD-NFVWSSIISGYTVNNR---GEEAVHFFK 231
S +VDL + G + + + M K VW ++++G + GE AV
Sbjct: 357 HEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLL 416
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG 272
D+ K V+ ++ L ++ +V G + + G
Sbjct: 417 DLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRG 457
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 193/343 (56%), Gaps = 5/343 (1%)
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV 407
L + ++SC D G H L +K +G++LV +Y + G++ +A+K F ++
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 408 CKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ 467
++ SW+++I + Q L+L +M Y+ +S+C+ A+ G+
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRS 242
Query: 468 FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQ 527
H + G +++ +S+I MY KCG ++D+ ++FD + V +N+MI GYA HG
Sbjct: 243 VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGL 302
Query: 528 AKQAIEIFT-MLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY 586
A QAIE+F M+ K+G P+ +T+L +LS+C HAG +++ F LM ++ +KPE HY
Sbjct: 303 AMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHY 361
Query: 587 SCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNP 643
SCLVD GR G L+EA ++++ + W +LL +CR H + G ++A++ + L P
Sbjct: 362 SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEP 421
Query: 644 SDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
A+++ L+N+Y G W+EA R+ M G+K +PG SW+
Sbjct: 422 DCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWI 464
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 168/338 (49%), Gaps = 11/338 (3%)
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
D + LSS +R+C D TG H +K G +D ++ S L+ LY + G + +A K+F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
+ ++++V+W +MI AQ + ++L ++ ++TS T A+L +C
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWR-VDICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGA 236
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
L GR +H + + + N+L+ MY +CG + DAF+ F KD SW+S+I
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 421 YKQNGMESEALELCKEMLAE-GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH 479
Y Q+G+ +A+EL + M+ + G + + +SSC + G++F + G
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVFD-AQVKPNEVIYNAMICGYAHHGQ---AKQAIEIF 535
++ S ++D+ + G ++++ ++ + +KPN VI+ +++ HG +A E
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEER 416
Query: 536 TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
MLE + T + + + + GY ++ + LM
Sbjct: 417 LMLEPDCAA----THVQLANLYASVGYWKEAATVRKLM 450
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 156/319 (48%), Gaps = 10/319 (3%)
Query: 40 NEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCV 99
+ Y S +R+C + G H + ++ G D + GSSLV +Y ++G + +A V
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSG-EVENAYKV 177
Query: 100 FHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---T 156
F ++ ER++V+W MISGFAQ + +L+S+M + P++ TF +LL C+
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGA 236
Query: 157 LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISG 216
LG+ +H G ++ +S++++ +Y KCGD+ +IFD KD W+S+I+G
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 217 YTVNNRGEEAVHFFKDMC-KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQN 275
Y + +A+ F+ M K KPD L +C + G + M ++G +
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 276 DCFVASVLLTLYANFGGLRDAEKLFRRIDDK-DIVAWNSMILA---HAQLGQGSSRSMQL 331
+ S L+ L FG L++A +L + K + V W S++ + H + G + +
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEER 416
Query: 332 LQELHRTTSLQIQGATLIA 350
L + +Q A L A
Sbjct: 417 LMLEPDCAATHVQLANLYA 435
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 138/264 (52%), Gaps = 2/264 (0%)
Query: 163 IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNR 222
H LA K G +D + S++V LY G+V + K+F+ M E++ W+++ISG+ R
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWR 201
Query: 223 GEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASV 282
+ + + M K P+ + ++ L AC L G VH Q + G ++ +++
Sbjct: 202 VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 283 LLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQ 342
L+++Y G L+DA ++F + +KD+V+WNSMI +AQ G + ++++L + + + +
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGL-AMQAIELFELMMPKSGTK 320
Query: 343 IQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKA 402
T + +L SC++ + GR+ +L+ + + + LV + G + +A +
Sbjct: 321 PDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALEL 380
Query: 403 FVDIVCKDDSS-WSSIIGTYKQNG 425
++ K +S W S++ + + +G
Sbjct: 381 IENMPMKPNSVIWGSLLFSCRVHG 404
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNVV+WT +IS + V +L++ MR PN+YTF+ LL AC G
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+H + GL+ +SL+ MY G +L+DA +F +D+V+WN MI+G+AQ
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCG-DLKDAFRIFDQFSNKDVVSWNSMIAGYAQ 299
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAETDAV 177
G LF M G KPD T++ +L C G E + L ++ G + +
Sbjct: 300 HGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELN 359
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDN-FVWSSII 214
S +VDL + G + ++ ++M K N +W S++
Sbjct: 360 HYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 100/188 (53%), Gaps = 3/188 (1%)
Query: 440 EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMED 499
+G +F +Y L + SC G FH A+K G+ DVY+GSS++ +Y G +E+
Sbjct: 114 DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVEN 173
Query: 500 SKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSH 559
+ KVF+ + N V + AMI G+A + +++++ + K+ PN TF A+LSAC+
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 560 AGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES--AWRT 617
+G + ++ L+ +K + L+ Y + G L++A++I + ++ +W +
Sbjct: 234 SGALGQGRSVHCQTLH-MGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 618 LLSACRNH 625
+++ H
Sbjct: 293 MIAGYAQH 300
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 243/463 (52%), Gaps = 48/463 (10%)
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
++H ++++ + + +++ + A ++F I + +++ +N+MI ++ +G
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 323 QGSSRSMQLLQELHRTTSLQIQGA-----TLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
L+ L +S++ +G T +LKSC + SDL G+ +H ++++
Sbjct: 82 PP-------LESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFH 134
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD------------DS------------- 412
+ +V +Y+ G++GDA K F ++ ++ DS
Sbjct: 135 RLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQM 194
Query: 413 ------SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK 466
SW+S+I + + G + EALEL EM+ +G ++ + + L ++ GK
Sbjct: 195 SERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGK 254
Query: 467 QFHVFAIKSGYNHD-VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHH 525
H A SG D + VG++++D Y K G +E + +F + N V +N +I G A +
Sbjct: 255 WIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVN 314
Query: 526 GQAKQAIEIF-TMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESE 584
G+ + I++F M+E+ V PN+ TFL +L+ CS+ G +E LF LM+ ++K++ +E
Sbjct: 315 GKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTE 374
Query: 585 HYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIEL 641
HY +VD R+GR+ EA++ ++ + + + W +LLSACR+H + K+ E +A +++++
Sbjct: 375 HYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKI 434
Query: 642 NPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
P + +Y+LLSN+Y EEG+W++ R M K ++K G S
Sbjct: 435 EPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 141/301 (46%), Gaps = 36/301 (11%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
NV+ + +I + G ++ F+ M+ +EYT++ LL++C++ + G +H
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVH 125
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
G L+R+G R +V +Y++ G + DA VF ++ ER++V WN+MI GF GD
Sbjct: 126 GELIRTGFHRLGKIRIGVVELYTSGG-RMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDV 184
Query: 125 CMVQRLFSEMWEV------------------------------EGLKPDNRTFVSLLKCC 154
LF +M E +G PD T V++L
Sbjct: 185 ERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPIS 244
Query: 155 STLGEV---MQIHGLASKFGAETDAV-VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
++LG + IH A G D + V +A+VD Y K GD+ + IF M+ ++ W
Sbjct: 245 ASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSW 304
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
+++ISG VN +GE + F M ++ +V P++ L C + G ++ G M+
Sbjct: 305 NTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMM 364
Query: 270 K 270
+
Sbjct: 365 E 365
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 163/378 (43%), Gaps = 43/378 (11%)
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG 158
VF + +++ +N MI ++ VG FS M + G+ D T+ LLK CS+L
Sbjct: 58 VFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM-KSRGIWADEYTYAPLLKSCSSLS 116
Query: 159 EVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIIS 215
++ +HG + G + +V+LY G + +K+FD M E++ VW+ +I
Sbjct: 117 DLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIR 176
Query: 216 GYTVNNRGEEAVHFFK-------------------------------DMCKQRVKPDQHV 244
G+ + E +H FK +M Q PD+
Sbjct: 177 GFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEAT 236
Query: 245 LSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCF-VASVLLTLYANFGGLRDAEKLFRRI 303
+ + L + L+TG +H +G D V + L+ Y G L A +FR++
Sbjct: 237 VVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM 296
Query: 304 DDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPA 363
+++V+WN++I A G+G + L + + AT + +L C +
Sbjct: 297 QRRNVVSWNTLISGSAVNGKGEF-GIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVER 355
Query: 364 GRQIHSLVM-KSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI-VCKDDSSWSSIIGTY 421
G ++ L+M + + T A+V + S G+I +AFK ++ V + + W S++
Sbjct: 356 GEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSAC 415
Query: 422 KQNG----MESEALELCK 435
+ +G E A+EL K
Sbjct: 416 RSHGDVKLAEVAAMELVK 433
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 7/221 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M R++V+W ++ISS + G +A +LF +M P+E T +L A+ + + G
Sbjct: 194 MSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTG 253
Query: 61 LQIHGVLVRSGLERDKFA-GSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
IH SGL +D G++LV Y +G +L A +F + R++V+WN +ISG A
Sbjct: 254 KWIHSTAESSGLFKDFITVGNALVDFYCKSG-DLEAATAIFRKMQRRNVVSWNTLISGSA 312
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGL-ASKFGAETD 175
G LF M E + P+ TF+ +L CCS G+V ++ GL +F E
Sbjct: 313 VNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEAR 372
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN-FVWSSIIS 215
AMVDL ++ G ++ K +M N +W S++S
Sbjct: 373 TEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLS 413
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 191/427 (44%), Gaps = 49/427 (11%)
Query: 189 CGDVSS---CRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVL 245
CG +S+ ++F ++ + V++++I Y++ E++ FF M + + D++
Sbjct: 46 CGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTY 105
Query: 246 SSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD 305
+ L++C + DL G VHG++I+ G + ++ LY + G + DA+K+F + +
Sbjct: 106 APLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE 165
Query: 306 KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTT-------------------SLQI--- 343
+++V WN MI G R + L +++ + +L++
Sbjct: 166 RNVVVWNLMIRGFCDSGD-VERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 344 ---QG-----ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTL-VGNALVHMYSECG 394
QG AT++ +L + L G+ IHS S + + VGNALV Y + G
Sbjct: 225 MIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 395 QIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL-CI 453
+ A F + ++ SW+++I NG ++L M+ EG + + L +
Sbjct: 285 DLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Query: 454 SSCSQLLAINVGKQF-----HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQ 507
+ CS + G++ F +++ H +++D+ ++ G + ++ K +
Sbjct: 345 ACCSYTGQVERGEELFGLMMERFKLEARTEHY----GAMVDLMSRSGRITEAFKFLKNMP 400
Query: 508 VKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTP-NQVTFLAMLSACSHAGYIEDT 566
V N ++ +++ HG K A E+ M E + P N ++ + + + G +D
Sbjct: 401 VNANAAMWGSLLSACRSHGDVKLA-EVAAM-ELVKIEPGNSGNYVLLSNLYAEEGRWQDV 458
Query: 567 LNLFTLM 573
+ TLM
Sbjct: 459 EKVRTLM 465
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 233/466 (50%), Gaps = 43/466 (9%)
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
G ++H +IK G Q D ++ LL L+ G L A ++F + + A+N MI +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY-- 110
Query: 321 LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD---LPAG--RQIHSLVMKSS 375
L G + + LL + + + G TL +LK+ ++ LP R +H+ ++K
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 376 VSHPTLVGNALVHMYSECGQIGDAFKAFV-----DIVC---------------------- 408
V ++ ALV Y + G++ A F ++VC
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 409 ----KDDSSWSSIIGTYKQNGMESE-ALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
KD +++++ + ++G ++ ++++ M G + I +CS L +
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 464 VGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYA 523
VG+Q H +KSG + +GSS++DMYAKCG + D+++VFD + N + +MI GY
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 524 HHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPES 583
+G ++A+E+FT +++ + PN VTFL LSACSH+G ++ +F M Y +KP+
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 584 EHYSCLVDAYGRAGRLEEAYQIVQ---KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIE 640
EHY+C+VD GRAG L +A++ + + W LLS+C H N ++ +A ++ +
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Query: 641 LNPSDH-ASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSW 685
LN +Y+ LSN+Y KW+ RE M + + K G SW
Sbjct: 471 LNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 188/435 (43%), Gaps = 59/435 (13%)
Query: 39 PNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACC 98
P +Y L +PA G +IH ++++G + D L+ ++ G L A
Sbjct: 33 PAKYIAGALQEHINSPAP-KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGC-LSYARQ 90
Query: 99 VFHDLLERDLVAWNVMISGFAQVGD----FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
VF +L + L A+N MISG+ + G +VQR+ G K D T +LK
Sbjct: 91 VFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRM-----SYSGEKADGYTLSMVLKAS 145
Query: 155 STLGEVM--------QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD 206
++ G M +H K E D V+ +A+VD Y K G + S R +F++M++++
Sbjct: 146 NSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDEN 205
Query: 207 NFVWSSIISGYTVNNRGEEAVHFF-----KD---------------------------MC 234
+S+ISGY E+A F KD M
Sbjct: 206 VVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQ 265
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ P+ +S + AC + G QVH Q++K+G + S LL +YA GG+
Sbjct: 266 RAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIN 325
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG--ATLIAIL 352
DA ++F ++ +K++ +W SMI + + G + L+ R +I+ T + L
Sbjct: 326 DARRVFDQMQEKNVFSWTSMIDGYGKNGNPE----EALELFTRMKEFRIEPNYVTFLGAL 381
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNA-LVHMYSECGQIGDAFKAFVDIVCKDD 411
+C + + G +I + + P + A +V + G + AF+ + + D
Sbjct: 382 SACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPD 441
Query: 412 SS-WSSIIGTYKQNG 425
S W++++ + +G
Sbjct: 442 SDIWAALLSSCNLHG 456
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 186/413 (45%), Gaps = 49/413 (11%)
Query: 162 QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNN 221
+IH K G + D +S ++ L+ KCG +S R++FD + + ++ +ISGY +
Sbjct: 55 KIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHG 114
Query: 222 RGEEAVHFFKDMCKQRVKPDQHVLSSTLRAC-------------------------VEIE 256
+E + + M K D + LS L+A VE++
Sbjct: 115 LVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELD 174
Query: 257 DLNTGVQVHGQMIKNG------------HQNDCFVASVLLTLYANFGGLRDAEKLFRRID 304
D+ V +K+G + + +++ Y N G + DAE++F
Sbjct: 175 DVLITALVD-TYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 305 DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG 364
KDIV +N+M+ ++ G+ + RS+ + + R +T +++ +C + G
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQR-AGFHPNISTFASVIGACSVLTSHEVG 292
Query: 365 RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQN 424
+Q+H+ +MKS V +G++L+ MY++CG I DA + F + K+ SW+S+I Y +N
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 425 GMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF-----HVFAIKSGYNH 479
G EALEL M I + +S+CS ++ G + +++K H
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVFDAQV-KPNEVIYNAMICGYAHHGQAKQA 531
+ I+D+ + G + + + A +P+ I+ A++ HG + A
Sbjct: 413 ----YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 38/309 (12%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P + + +IS +L+ G V + L M E+ + YT S++L+A + +
Sbjct: 95 LPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMIL 154
Query: 61 LQ-----IHGVLVRSGLERDKFAGSSLVYMYSNNGS---------NLRD---ACC----- 98
+ +H +++ +E D ++LV Y +G ++D CC
Sbjct: 155 PRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMIS 214
Query: 99 -------------VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNR 145
+F+ +D+V +N M+ GF++ G+ + G P+
Sbjct: 215 GYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIS 274
Query: 146 TFVSLLKCCSTLG--EV-MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSM 202
TF S++ CS L EV Q+H K G T + S+++D+YAKCG ++ R++FD M
Sbjct: 275 TFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 334
Query: 203 EEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGV 262
+EK+ F W+S+I GY N EEA+ F M + R++P+ L AC ++ G
Sbjct: 335 QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGY 394
Query: 263 QVHGQMIKN 271
++ M ++
Sbjct: 395 EIFESMQRD 403
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 39/252 (15%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMD------------------------ 36
M NVV T++IS ++ G V A ++FN +V D
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 37 ----ER----PNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSN 88
+R PN TF+ ++ AC+ VG Q+H +++SG+ GSSL+ MY+
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 89 NGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFV 148
G + DA VF + E+++ +W MI G+ + G+ LF+ M E ++P+ TF+
Sbjct: 321 CG-GINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFR-IEPNYVTFL 378
Query: 149 SLLKCCSTLGEVMQ----IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE 204
L CS G V + + + + + +VDL + GD++ + +M E
Sbjct: 379 GALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPE 438
Query: 205 K-DNFVWSSIIS 215
+ D+ +W++++S
Sbjct: 439 RPDSDIWAALLS 450
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 133/318 (41%), Gaps = 77/318 (24%)
Query: 363 AGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYK 422
AG++IH+ ++K+ + L+ ++ +CG + A + F ++ S+++ +I Y
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 423 QNGMESEALELCKEMLAEGITFTSYSLPLCISS-----CSQLLAINVGKQFHVFAIKSGY 477
++G+ E L L + M G Y+L + + + + +L ++ + H IK
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 478 NHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNE------------------------- 512
D + ++++D Y K G +E ++ VF+ N
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 513 ------VIYNAMICGYAHHGQ-AKQAIEIFTMLEKNGVTPNQVTFLAMLSACS------- 558
V+YNAM+ G++ G+ AK++++++ +++ G PN TF +++ ACS
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEV 291
Query: 559 ----HA------------------------GYIEDTLNLFTLMLYKYKIKPESEHYSCLV 590
HA G I D +F M K ++ ++
Sbjct: 292 GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS-----WTSMI 346
Query: 591 DAYGRAGRLEEAYQIVQK 608
D YG+ G EEA ++ +
Sbjct: 347 DGYGKNGNPEEALELFTR 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMIC 520
A GK+ H IK+G+ D+ + ++ ++ KCG + +++VFD KP YN MI
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 521 GYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI----EDTLNLFTLMLYK 576
GY HG K+ + + + +G + T +L A + G L + K
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ 607
++ + + LVD Y ++G+LE A + +
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFE 199
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 198/385 (51%), Gaps = 18/385 (4%)
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV 371
N+MI A + L Q +L + L R +SL + LK C DL G QIH +
Sbjct: 81 NTMIRAFS-LSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKI 139
Query: 372 MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEAL 431
+L+ L+ +YS C DA K F +I +D SW+ + Y +N + L
Sbjct: 140 FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVL 199
Query: 432 ELCKEML--------AEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYV 483
L +M +G+T L + +C+ L A++ GKQ H F ++G + + +
Sbjct: 200 VLFDKMKNDVDGCVKPDGVTCL-----LALQACANLGALDFGKQVHDFIDENGLSGALNL 254
Query: 484 GSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGV 543
++++ MY++CG M+ + +VF + N V + A+I G A +G K+AIE F + K G+
Sbjct: 255 SNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGI 314
Query: 544 TPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY-KYKIKPESEHYSCLVDAYGRAGRLEEA 602
+P + T +LSACSH+G + + + F M ++KIKP HY C+VD GRA L++A
Sbjct: 315 SPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKA 374
Query: 603 YQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEE 659
Y +++ + WRTLL ACR H + ++GE+ +IEL + Y+LL N Y
Sbjct: 375 YSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTV 434
Query: 660 GKWEEARDCREKMAKTGVKKDPGSS 684
GKWE+ + R M + + PG S
Sbjct: 435 GKWEKVTELRSLMKEKRIHTKPGCS 459
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 176/379 (46%), Gaps = 28/379 (7%)
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSS-TLRACVEIEDLNTGVQVHGQMI 269
+++I ++++ E F+ + + P + SS L+ C++ DL G+Q+HG++
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 270 KNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM 329
+G +D + + L+ LY+ DA K+F I +D V+WN +L L +R +
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWN--VLFSCYLRNKRTRDV 198
Query: 330 QLLQELHRTT---SLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNAL 386
+L + + ++ G T + L++C N L G+Q+H + ++ +S + N L
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTL 258
Query: 387 VHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTS 446
V MYS CG + A++ F + ++ SW+++I NG EA+E EML GI+
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEE 318
Query: 447 YSLPLCISSCSQLLAINVGKQFH------VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
+L +S+CS + G F F IK +H ++D+ + ++ +
Sbjct: 319 QTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHH----YGCVVDLLGRARLLDKA 374
Query: 501 KKVFDA-QVKPNEVIYNAMICGYAHHGQAKQAIEIFTML-----EKNGVTPNQVTFLAML 554
+ + ++KP+ I+ ++ HG + + + L E+ G ++ +L
Sbjct: 375 YSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAG------DYVLLL 428
Query: 555 SACSHAGYIEDTLNLFTLM 573
+ S G E L +LM
Sbjct: 429 NTYSTVGKWEKVTELRSLM 447
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 129/248 (52%), Gaps = 7/248 (2%)
Query: 11 TLISSHLRAGSVPKAFQLFNDMRVMDERP-NEYTFSVLLRACATPALWNVGLQIHGVLVR 69
T+I + + + + F+LF +R P N + S L+ C GLQIHG +
Sbjct: 82 TMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFS 141
Query: 70 SGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQR 129
G D ++L+ +YS N DAC VF ++ +RD V+WNV+ S + + V
Sbjct: 142 DGFLSDSLLMTTLMDLYST-CENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 130 LFSEMW-EVEG-LKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSAMVD 184
LF +M +V+G +KPD T + L+ C+ LG + Q+H + G +S+ +V
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVS 260
Query: 185 LYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHV 244
+Y++CG + ++F M E++ W+++ISG +N G+EA+ F +M K + P++
Sbjct: 261 MYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQT 320
Query: 245 LSSTLRAC 252
L+ L AC
Sbjct: 321 LTGLLSAC 328
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 171/379 (45%), Gaps = 21/379 (5%)
Query: 62 QIHGVLVRSGLER--DKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
QIH +L+R+ L R D F S ++ +C VF L L N MI F+
Sbjct: 29 QIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFS 88
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDA 176
C RLF + L + + LKCC G++ +QIHG G +D+
Sbjct: 89 LSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDS 148
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
++ + ++DLY+ C + + K+FD + ++D W+ + S Y N R + + F M
Sbjct: 149 LLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKND 208
Query: 237 R---VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
VKPD L+AC + L+ G QVH + +NG +++ L+++Y+ G +
Sbjct: 209 VDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSM 268
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
A ++F + ++++V+W ++I A G G +++ E+ + + + TL +L
Sbjct: 269 DKAYQVFYGMRERNVVSWTALISGLAMNGFG-KEAIEAFNEMLK-FGISPEEQTLTGLLS 326
Query: 354 SCKNKSDLPAGRQIHSLV------MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV 407
+C + + G + +K ++ H V V + + A+ +
Sbjct: 327 ACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCV----VDLLGRARLLDKAYSLIKSME 382
Query: 408 CKDDSS-WSSIIGTYKQNG 425
K DS+ W +++G + +G
Sbjct: 383 MKPDSTIWRTLLGACRVHG 401
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 15/231 (6%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE---RPNEYTFSVLLRACATPALW 57
+P R+ V+W L S +LR LF+ M+ + +P+ T + L+ACA
Sbjct: 174 IPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGAL 233
Query: 58 NVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISG 117
+ G Q+H + +GL ++LV MYS GS + A VF+ + ER++V+W +ISG
Sbjct: 234 DFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGS-MDKAYQVFYGMRERNVVSWTALISG 292
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGL-------ASKF 170
A G F+EM + G+ P+ +T LL CS G V + G+ + +F
Sbjct: 293 LAMNGFGKEAIEAFNEMLKF-GISPEEQTLTGLLSACSHSGLVAE--GMMFFDRMRSGEF 349
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK-DNFVWSSIISGYTVN 220
+ + +VDL + + + SME K D+ +W +++ V+
Sbjct: 350 KIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVH 400
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 256/531 (48%), Gaps = 47/531 (8%)
Query: 192 VSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRA 251
V+ ++I D+F W ++ + + + +E V + DM + P H ++S LRA
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 252 CVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAW 311
C ++E++ G +H Q +KNG +V + L+ LY+ G + A+K F I +K+ V+W
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTS--LQIQGATLIAILKSCKNKSDLPAGRQIHS 369
NS++ + + G+ L E R + + I+ S K D+ + S
Sbjct: 174 NSLLHGYLESGE--------LDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFS 225
Query: 370 -LVMKSSVSHPTLVGN--------------------------ALVHMYSECGQIGDAFKA 402
+ +KS S L+G ++ Y++ G + A +
Sbjct: 226 AMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEEL 285
Query: 403 FVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEG--ITFTSYSLPLCISSCSQLL 460
F + KD + ++I Y QNG +AL+L +ML I +L +S+ SQL
Sbjct: 286 FRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLG 345
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMIC 520
+ G + + G D + +S+ID+Y K G + K+F K + V Y+AMI
Sbjct: 346 NTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIM 405
Query: 521 GYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIK 580
G +G A +A +FT + + + PN VTF +LSA SH+G +++ F M + ++
Sbjct: 406 GCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLE 464
Query: 581 PESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKK 637
P ++HY +VD GRAGRLEEAY++++ + W LL A HNN + GE +
Sbjct: 465 PSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSH 524
Query: 638 MIEL--NPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
++L +P+ + S+ L+ IY G+W++AR R+ + + + K G SW+
Sbjct: 525 CVKLETDPTGYLSH--LAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWV 573
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 192/450 (42%), Gaps = 36/450 (8%)
Query: 107 DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---I 163
D +W ++ +Q F ++ +M G+ P + S+L+ C + ++ I
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHN-SGIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 164 HGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRG 223
H A K G V + +V LY++ G + +K FD + EK+ W+S++ GY +
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 224 EEAVHFFKDMCKQRVKPDQHVLSSTLR------ACVEIEDLNTGVQVHGQMIKNGH---- 273
+EA F + ++ ++SS + AC + ++ G+
Sbjct: 187 DEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCR 246
Query: 274 -------------QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQ 320
Q + +++ Y G ++ AE+LFR + KD + +++MI + Q
Sbjct: 247 EMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQ 306
Query: 321 LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPT 380
G+ Q L R + +Q TL +++ + + G + S + + +
Sbjct: 307 NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDD 366
Query: 381 LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
L+ +L+ +Y + G AFK F ++ KD S+S++I NGM +EA L M+ +
Sbjct: 367 LLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEK 426
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSS----IIDMYAKCGH 496
I + +S+ S + G + S +H++ + ++DM + G
Sbjct: 427 KIPPNVVTFTGLLSAYSHSGLVQEGYK----CFNSMKDHNLEPSADHYGIMVDMLGRAGR 482
Query: 497 MEDSKKVFDAQ-VKPNEVIYNAMICGYAHH 525
+E++ ++ + ++PN ++ A++ H
Sbjct: 483 LEEAYELIKSMPMQPNAGVWGALLLASGLH 512
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 155/343 (45%), Gaps = 40/343 (11%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
+W L+ + + ++ DM P+ + + +LRAC G IH
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 68 VRSGL-------------------------------ERDKFAGSSLVYMYSNNGSNLRDA 96
+++GL E++ + +SL++ Y +G L +A
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE-LDEA 189
Query: 97 CCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST 156
VF + E+D V+WN++IS +A+ GD LFS M ++ N + C
Sbjct: 190 RRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM-PLKSPASWNILIGGYVNC--- 245
Query: 157 LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISG 216
M++ + + V M+ Y K GDV S ++F M +KD V+ ++I+
Sbjct: 246 --REMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 303
Query: 217 YTVNNRGEEAVHFFKDMCKQR--VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ 274
YT N + ++A+ F M ++ ++PD+ LSS + A ++ + + G V + ++G +
Sbjct: 304 YTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIK 363
Query: 275 NDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILA 317
D +++ L+ LY G A K+F ++ KD V++++MI+
Sbjct: 364 IDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMG 406
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 148/330 (44%), Gaps = 30/330 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P ++ V+W +ISS+ + G + A LF+ M + +PA WN+
Sbjct: 196 IPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPL-----------------KSPASWNIL 238
Query: 61 LQIHGVLVRSGLERDKF------AGSSLVYMYSNNG--SNLRDACCVFHDLLERDLVAWN 112
+ + L R F G S + M S +++ A +F + ++D + ++
Sbjct: 239 IGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYD 298
Query: 113 VMISGFAQVGDFCMVQRLFSEMWEVEG-LKPDNRTFVSLLKCCSTLGEV---MQIHGLAS 168
MI+ + Q G +LF++M E ++PD T S++ S LG + +
Sbjct: 299 AMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYIT 358
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVH 228
+ G + D ++S++++DLY K GD + K+F ++ +KD +S++I G +N EA
Sbjct: 359 EHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANS 418
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F M ++++ P+ + L A + G + M + + +++ +
Sbjct: 419 LFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLG 478
Query: 289 NFGGLRDAEKLFRRID-DKDIVAWNSMILA 317
G L +A +L + + + W +++LA
Sbjct: 479 RAGRLEEAYELIKSMPMQPNAGVWGALLLA 508
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 235/486 (48%), Gaps = 46/486 (9%)
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL-- 299
+H + L++C DL +HG +++ +D FVAS LL L + L
Sbjct: 12 KHPKLALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLG 68
Query: 300 -----FRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
F +I + ++ +N +I + G S++ ++ ++ + T ++K+
Sbjct: 69 YAYGIFSQIQNPNLFVFNLLIRCFST-GAEPSKAFGFYTQMLKS-RIWPDNITFPFLIKA 126
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW 414
+ G Q HS +++ + V N+LVHMY+ CG I A + F + +D SW
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 415 SSIIGTYKQNGMESEALELCKEML-------------------------------AEGIT 443
+S++ Y + GM A E+ EM EG+
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 444 FTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
+ ISSC+ L A+ G++ + + +KS ++ +G++++DM+ +CG +E + V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 504 FDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYI 563
F+ + + + ++++I G A HG A +A+ F+ + G P VTF A+LSACSH G +
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 564 EDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLS 620
E L ++ M + I+P EHY C+VD GRAG+L EA + K + LL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 621 ACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
AC+ + NT++ E+ +I++ P Y+LLSNIY G+W++ R+ M + VKK
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 681 PGSSWL 686
PG S +
Sbjct: 487 PGWSLI 492
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 212/478 (44%), Gaps = 51/478 (10%)
Query: 148 VSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRK---------- 197
++LL+ CS+ ++ IHG + +D V+S ++ L C D S+ K
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLAL---CVDDSTFNKPTNLLGYAYG 72
Query: 198 IFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIED 257
IF ++ + FV++ +I ++ +A F+ M K R+ PD ++A E+E
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 258 LNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILA 317
+ G Q H Q+++ G QND +V + L+ +YAN G + A ++F ++ +D+V+W SM+
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 318 HAQLGQGSSRSMQLLQELHR---TTSLQIQG--------------------------ATL 348
+ + G + + HR T S+ I G +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
++++ SC + L G + + V+KS ++ ++G ALV M+ CG I A F +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF 468
D SWSSII +G +A+ +M++ G + +S+CS + G +
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 469 HVFAIKS-GYNHDVYVGSSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMICGYAHHG 526
+ K G + I+DM + G + +++ + VKPN I A++ +
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 527 QAKQAIEIFTMLEKNGVTPNQVTFLAMLS---ACSHAGYIEDTLNLFTLMLYKYKIKP 581
+ A + ML K V P + +LS AC AG + +L +M K KP
Sbjct: 433 NTEVAERVGNMLIK--VKPEHSGYYVLLSNIYAC--AGQWDKIESLRDMMKEKLVKKP 486
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 34/300 (11%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N+ + LI KAF + M P+ TF L++A + VG Q H
Sbjct: 81 NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTH 140
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
+VR G + D + +SLV+MY+N G + A +F + RD+V+W M++G+ + G
Sbjct: 141 SQIVRFGFQNDVYVENSLVHMYANCGF-IAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMV 199
Query: 125 CMVQRLFSEM-------WEV-----------------------EGLKPDNRTFVSLLKCC 154
+ +F EM W + EG+ + VS++ C
Sbjct: 200 ENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSC 259
Query: 155 STLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWS 211
+ LG + + + K + ++ +A+VD++ +CGD+ +F+ + E D+ WS
Sbjct: 260 AHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWS 319
Query: 212 SIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
SII G V+ +A+H+F M P ++ L AC + G++++ M K+
Sbjct: 320 SIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKD 379
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 10/259 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MPHRN+ TW+ +I+ + + KA LF M+ NE ++ +CA G
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+ + +V+S + + G++LV M+ G ++ A VF L E D ++W+ +I G A
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCG-DIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIH-GLASKFGAETDA 176
G FS+M + G P + TF ++L CS G V ++I+ + G E
Sbjct: 328 HGHAHKAMHYFSQMISL-GFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRL 386
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+VD+ + G ++ M K N + G + E +M
Sbjct: 387 EHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML-I 445
Query: 237 RVKPDQ---HVLSSTLRAC 252
+VKP+ +VL S + AC
Sbjct: 446 KVKPEHSGYYVLLSNIYAC 464
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 185/332 (55%), Gaps = 21/332 (6%)
Query: 374 SSVSHPTLVG--------------NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIG 419
SSVSH TL A++ Y+ G I +A F D+ +D SW++I+
Sbjct: 173 SSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILA 232
Query: 420 TYKQNGMESEALELCKEMLAEGITFTSYSLPLCI-SSCSQLLAINVGKQFHVFAIKSGYN 478
QNG+ EA+ L + M+ E + +C+ S+C+Q + + K H FA + +
Sbjct: 233 ACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLS 292
Query: 479 HDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML 538
DV+V +S++D+Y KCG++E++ VF K + +N+MI +A HG++++AI +F +
Sbjct: 293 SDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM 352
Query: 539 EK---NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGR 595
K N + P+ +TF+ +L+AC+H G + F LM ++ I+P EHY CL+D GR
Sbjct: 353 MKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGR 412
Query: 596 AGRLEEAYQI---VQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILL 652
AGR +EA ++ ++ E+ W +LL+AC+ H + + E + K ++ LNP++ ++
Sbjct: 413 AGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMM 472
Query: 653 SNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
+N+Y E G WEEAR R+ + K PG S
Sbjct: 473 ANLYGEMGNWEEARRARKMIKHQNAYKPPGWS 504
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 115/255 (45%), Gaps = 40/255 (15%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM---------------------------- 32
M RNVV+WT ++S + R+G + A LF DM
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLF 247
Query: 33 -RVMDE---RPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSN 88
R+++E RPNE T +L ACA + IH R L D F +SLV +Y
Sbjct: 248 RRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGK 307
Query: 89 NGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWE--VEGLKPDNRT 146
G NL +A VF ++ L AWN MI+ FA G +F EM + + +KPD+ T
Sbjct: 308 CG-NLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHIT 366
Query: 147 FVSLLKCCSTLGEVMQIHG----LASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSM 202
F+ LL C+ G V + G + ++FG E ++DL + G ++ +M
Sbjct: 367 FIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 426
Query: 203 EEK-DNFVWSSIISG 216
+ K D +W S+++
Sbjct: 427 KMKADEAIWGSLLNA 441
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 136/296 (45%), Gaps = 56/296 (18%)
Query: 17 LRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPAL---WNVGLQIHGVLVRSGLE 73
L A S F+L + V RPN + + ++L++ TP L ++ L +H L +SG
Sbjct: 104 LHASSAFSFFRLMVNRSV--PRPNHFIYPLVLKS--TPYLSSAFSTPL-VHTHLFKSGFH 158
Query: 74 RDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSE 133
++L++ Y+++ S++ A +F ++ ER++V+W M+SG+A+ GD LF +
Sbjct: 159 LYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFED 218
Query: 134 MWEVE-------------------------------GLKPDNRTFVSLLKCCSTLGEVM- 161
M E + ++P+ T V +L C+ G +
Sbjct: 219 MPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL 278
Query: 162 --QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTV 219
IH A + +D VS+++VDLY KCG++ +F +K W+S+I+ + +
Sbjct: 279 AKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFAL 338
Query: 220 NNRGEEAVHFFKDMCK---QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG 272
+ R EEA+ F++M K +KPD L AC HG ++ G
Sbjct: 339 HGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC-----------THGGLVSKG 383
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 6/259 (2%)
Query: 172 AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFK 231
+E + V +AM+ YA+ GD+S+ +F+ M E+D W++I++ T N EAV F+
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 232 DMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
M + ++P++ + L AC + L +H + +D FV++ L+ LY
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC 308
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHR--TTSLQIQGATL 348
G L +A +F+ K + AWNSMI A G+ S ++ + +E+ + ++ T
Sbjct: 309 GNLEEASSVFKMASKKSLTAWNSMINCFALHGR-SEEAIAVFEEMMKLNINDIKPDHITF 367
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIV 407
I +L +C + + GR L+ P + L+ + G+ +A + +
Sbjct: 368 IGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMK 427
Query: 408 CK-DDSSWSSIIGTYKQNG 425
K D++ W S++ K +G
Sbjct: 428 MKADEAIWGSLLNACKIHG 446
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 181/411 (44%), Gaps = 55/411 (13%)
Query: 191 DVSSCRKIFDSMEEKDNFVWSSIISGYT--VNNRGEEAVHFFKDMCKQRV-KPDQHVLSS 247
++S R IFD + +++++++ Y+ + A FF+ M + V +P+ +
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 248 TLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN-FGGLRDAEKLFRRIDDK 306
L++ + + VH + K+G V + LL YA+ + A +LF + ++
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 307 DIVAWNSMILAHAQLGQGSS------------------------------RSMQLLQELH 336
++V+W +M+ +A+ G S+ ++ L + +
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 337 RTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQI 396
S++ T++ +L +C L + IH+ + +S V N+LV +Y +CG +
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 397 GDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEML--------AEGITFTSYS 448
+A F K ++W+S+I + +G EA+ + +EM+ + ITF
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIG-- 369
Query: 449 LPLCISSCSQLLAINVGK-QFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA- 506
+++C+ ++ G+ F + + G + +ID+ + G +++ +V
Sbjct: 370 ---LLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 426
Query: 507 QVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKN--GVTPNQVTFLAMLS 555
++K +E I+ +++ HG +++ + KN + PN ++AM++
Sbjct: 427 KMKADEAIWGSLLNACKIHGH----LDLAEVAVKNLVALNPNNGGYVAMMA 473
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 253/504 (50%), Gaps = 15/504 (2%)
Query: 188 KCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLS- 246
K G +++ +FD M E+D W+++ISG E + F DM + ++P + S
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 247 -STLRACVEIEDLNTGVQVHGQMIKNG-HQNDCFVASVLLTLYANFGGLRDAEKLFRRID 304
++L CV G Q+HG I +G + + V + ++ +Y G A +F ++
Sbjct: 142 LASLVTCVR-----HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196
Query: 305 DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG 364
D+D+V+WN +IL+ + G Q L R +Q T+ ++ C + +L G
Sbjct: 197 DRDVVSWNCLILSCSDSGNKEVALDQFW--LMREMEIQPDEYTVSMVVSICSDLRELSKG 254
Query: 365 RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQN 424
+Q +L +K ++V A + M+S+C ++ D+ K F ++ D +S+IG+Y +
Sbjct: 255 KQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
Query: 425 GMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVG 484
+AL L + + + ++ +SS + ++ ++ G H IK G++ D V
Sbjct: 315 CCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVA 373
Query: 485 SSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKN-GV 543
+S+++MY K G ++ + VF + + +N +I G A + +A +++ IF L N +
Sbjct: 374 TSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSL 433
Query: 544 TPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAY 603
P++VT + +L AC +AG++ + + +F+ M + + P +EHY+C+++ R G + EA
Sbjct: 434 KPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAK 493
Query: 604 QIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEG 660
I K + S W +L A + +T++ E AK M+E P Y++L IY
Sbjct: 494 DIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTW 553
Query: 661 KWEEARDCREKMAKTGVKKDPGSS 684
+WE + R M + +K GSS
Sbjct: 554 RWENSVKLRYAMNEHKLKSAQGSS 577
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 222/450 (49%), Gaps = 25/450 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVL--LRACATPALWN 58
MP R+VV+W T+IS + G ++F DM+ + RP E+TFS+L L C
Sbjct: 96 MPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRH---- 151
Query: 59 VGLQIHGVLVRSGLER-DKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISG 117
G QIHG + SG+ R + +S++ MY G A VF + +RD+V+WN +I
Sbjct: 152 -GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGV-FDYALSVFLTMEDRDVVSWNCLILS 209
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAET 174
+ G+ + F M E+E ++PD T ++ CS L E+ Q L K G +
Sbjct: 210 CSDSGNKEVALDQFWLMREME-IQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLS 268
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
+++V A +D+++KC + K+F +E+ D+ + +S+I Y+ + GE+A+ F
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAM 328
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
Q V+PD+ SS L + + L+ G VH +IK G D VA+ L+ +Y G +
Sbjct: 329 TQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVD 387
Query: 295 DAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
A +F + D KD++ WN++I+ A+ + S+ + +L SL+ TL+ IL +
Sbjct: 388 LAMGVFAKTDGKDLIFWNTVIMGLAR-NSRAVESLAIFNQLLMNQSLKPDRVTLMGILVA 446
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGN----ALVHMYSECGQIGDAFKAFVDIVCKD 410
C + G QI S + K+ +P GN ++ + G I +A K D + +
Sbjct: 447 CCYAGFVNEGIQIFSSMEKAHGVNP---GNEHYACIIELLCRVGMINEA-KDIADKIPFE 502
Query: 411 DSS--WSSIIGTYKQNGMESEALELCKEML 438
SS W I+ G A + K ML
Sbjct: 503 PSSHIWEPILCASLDLGDTRLAETVAKTML 532
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 144/535 (26%), Positives = 245/535 (45%), Gaps = 61/535 (11%)
Query: 16 HLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERD 75
+ ++GSV A QLF+D+ P++ T + WNV L+ GL ++
Sbjct: 49 YFKSGSVINALQLFDDI------PDKNTIT-----------WNVCLK--------GLFKN 83
Query: 76 KFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEM- 134
Y NN +L F ++ ERD+V+WN MISG G R+F +M
Sbjct: 84 G---------YLNNALDL------FDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQ 128
Query: 135 -WEVEGLKPDNRTFVSL--LKCCSTLGEVMQIHGLASKFG-AETDAVVSSAMVDLYAKCG 190
WE+ +P TF L L C GE QIHG A G + + VV ++++D+Y + G
Sbjct: 129 RWEI---RPTEFTFSILASLVTCVRHGE--QIHGNAICSGVSRYNLVVWNSVMDMYRRLG 183
Query: 191 DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLR 250
+F +ME++D W+ +I + + E A+ F M + ++PD++ +S +
Sbjct: 184 VFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVS 243
Query: 251 ACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA 310
C ++ +L+ G Q IK G ++ V + +++ L D+ KLFR ++ D V
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
Query: 311 WNSMILAHAQ--LGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIH 368
NSMI +++ G+ + R L L T S++ T ++L S N L G +H
Sbjct: 304 CNSMIGSYSWHCCGEDALR----LFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVH 358
Query: 369 SLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMES 428
SLV+K T V +L+ MY + G + A F KD W+++I +N
Sbjct: 359 SLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAV 418
Query: 429 EALELCKEMLA-EGITFTSYSLPLCISSCSQLLAINVGKQ-FHVFAIKSGYNHDVYVGSS 486
E+L + ++L + + +L + +C +N G Q F G N +
Sbjct: 419 ESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYAC 478
Query: 487 IIDMYAKCGHMEDSKKVFDA-QVKPNEVIYNAMICGYAHHGQAKQAIEIF-TMLE 539
II++ + G + ++K + D +P+ I+ ++C G + A + TMLE
Sbjct: 479 IIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLE 533
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 117/274 (42%), Gaps = 30/274 (10%)
Query: 364 GRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQ 423
+ +H+ ++++ T GN + +Y + G + +A + F DI K+ +W+ + +
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 424 NGMESEALELCKEMLAEGIT-------------FTSYSLPLCISS--------------- 455
NG + AL+L EM + F Y + +
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL 142
Query: 456 CSQLLAINVGKQFHVFAIKSGYN-HDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVI 514
S + + G+Q H AI SG + +++ V +S++DMY + G + + VF + V
Sbjct: 143 ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 515 YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLML 574
+N +I + G + A++ F ++ + + P++ T ++S CS + L +
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCI 262
Query: 575 YKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
K S +D + + RL+++ ++ ++
Sbjct: 263 -KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE 295
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 227/440 (51%), Gaps = 53/440 (12%)
Query: 293 LRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA--TLIA 350
+R+A K+F I + D+++ ++I + SR ++ Q R L I+ T
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVK----ESRHVEASQAFKRLLCLGIRPNEFTFGT 98
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD 410
++ S D+ G+Q+H +K ++ VG+A+++ Y + + DA + F D +D
Sbjct: 99 VIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD--TRD 156
Query: 411 DS---------------------------------SWSSIIGTYKQNGMESEALELCKEM 437
+ +W+++IG + Q G EA+ +M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 438 LAEGITFTSYS-LPLCISSCSQLLAINVGKQFHVFAIKS-GYNHDVYVGSSIIDMYAKCG 495
L EG+ + S P I++ S + + GK H AIK G +V+V +S+I Y+KCG
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 496 HMEDSKKVFDA--QVKPNEVIYNAMICGYAHHGQAKQAIEIF-TMLEKNGVTPNQVTFLA 552
+MEDS F+ + + N V +N+MI GYAH+G+ ++A+ +F M++ + PN VT L
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG 336
Query: 553 MLSACSHAGYIEDTLNLFTLMLYKYKIKP---ESEHYSCLVDAYGRAGRLEEAYQIVQK- 608
+L AC+HAG I++ F + Y P E EHY+C+VD R+GR +EA ++++
Sbjct: 337 VLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Query: 609 --DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEAR 666
D W+ LL C+ H+N ++ + +A K++EL+P D +SY++LSN Y W+
Sbjct: 396 PLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVS 455
Query: 667 DCREKMAKTGVKKDPGSSWL 686
R KM +TG+K+ G SW+
Sbjct: 456 LIRRKMKETGLKRFTGCSWI 475
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 157/361 (43%), Gaps = 51/361 (14%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
+P +V++ T +I ++ +A Q F + + RPNE+TF ++ + T +G
Sbjct: 53 IPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLG 112
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGS----------------------------- 91
Q+H ++ GL + F GS+++ Y +
Sbjct: 113 KQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKK 172
Query: 92 -NLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSL 150
+A +F + ER +V WN +I GF+Q G F +M + P+ TF
Sbjct: 173 HEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCA 232
Query: 151 LKCCSTL---GEVMQIHGLASKF-GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD 206
+ S + G IH A KF G + V ++++ Y+KCG++ F+ +EE+
Sbjct: 233 ITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQ 292
Query: 207 NFV--WSSIISGYTVNNRGEEAVHFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQ 263
+ W+S+I GY N RGEEAV F+ M K ++P+ + L AC + G+
Sbjct: 293 RNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN-----HAGLI 347
Query: 264 VHGQMIKNGHQNDCFVASVL--------LTLYANFGGLRDAEKLFRRID-DKDIVAWNSM 314
G M N ND ++L + + + G ++AE+L + + D I W ++
Sbjct: 348 QEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKAL 407
Query: 315 I 315
+
Sbjct: 408 L 408
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 148/310 (47%), Gaps = 40/310 (12%)
Query: 93 LRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK 152
+R+A VF ++ E D+++ +I F + + F + + G++P+ TF +++
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCL-GIRPNEFTFGTVIG 101
Query: 153 CCSTLGEVM---QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFD--------- 200
+T +V Q+H A K G ++ V SA+++ Y K ++ R+ FD
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 201 ----------------------SMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
+M E+ W+++I G++ R EEAV+ F DM ++ V
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 239 K-PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN-GHQNDCFVASVLLTLYANFGGLRDA 296
P++ + A I G +H IK G + + FV + L++ Y+ G + D+
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 297 EKLFRRIDD--KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
F ++++ ++IV+WNSMI +A G+G ++ + +++ + T+L+ T++ +L +
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRG-EEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 355 CKNKSDLPAG 364
C + + G
Sbjct: 341 CNHAGLIQEG 350
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 28/324 (8%)
Query: 365 RQIHS----LVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGT 420
R+ HS LV KS S P LV H+ S+ I +A K F +I D S +++IG
Sbjct: 14 RKYHSSANALVTKSPNSIPELVK----HIDSDL--IRNAHKVFDEIPELDVISATAVIGR 67
Query: 421 YKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD 480
+ + EA + K +L GI ++ I S + + +GKQ H +A+K G +
Sbjct: 68 FVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASN 127
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK 540
V+VGS++++ Y K + D+++ FD PN V +I GY + ++A+ +F + +
Sbjct: 128 VFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPE 187
Query: 541 NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA------YG 594
V VT+ A++ S G E+ +N F ML + + P + C + A +G
Sbjct: 188 RSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHG 243
Query: 595 RAGRLEE-AYQIVQKDGSESAWRTLL---SACRNHNNTKIGEKSAKKMIELNPSDHASYI 650
+ A + + K + W +L+ S C N ++ + A +E + S+
Sbjct: 244 AGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL----AFNKLEEEQRNIVSWN 299
Query: 651 LLSNIYIEEGKWEEARDCREKMAK 674
+ Y G+ EEA EKM K
Sbjct: 300 SMIWGYAHNGRGEEAVAMFEKMVK 323
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 177/404 (43%), Gaps = 44/404 (10%)
Query: 192 VSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRA 251
+ + K+FD + E D +++I + +R EA FK + ++P++ + + +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 252 CVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK------------- 298
D+ G Q+H +K G ++ FV S +L Y L DA +
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 299 ------------------LFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTS 340
LFR + ++ +V WN++I +Q G+ + ++ ++ R
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGR-NEEAVNTFVDMLREGV 221
Query: 341 LQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS-SVSHPTLVGNALVHMYSECGQIGDA 399
+ +T + + N + AG+ IH+ +K V N+L+ YS+CG + D+
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 400 FKAF--VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE-GITFTSYSLPLCISSC 456
AF ++ ++ SW+S+I Y NG EA+ + ++M+ + + + ++ + +C
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 457 SQLLAINVGKQFHVFAIKSGYNHDVYV---GSSIIDMYAKCGHMEDSKKVFDAQ-VKPNE 512
+ I G + A+ + ++ + ++DM ++ G ++++++ + + P
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 513 VIYNAMICGYAHHGQAKQA-IEIFTMLEKNGVTPNQVTFLAMLS 555
+ A++ G H + A + +LE + P V+ MLS
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILE---LDPRDVSSYVMLS 442
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 229/447 (51%), Gaps = 18/447 (4%)
Query: 252 CVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAW 311
C +++L Q+H Q+I G + + S LL L + L A + R+I + + +
Sbjct: 19 CKSLQNLK---QIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSVFLY 74
Query: 312 NSMILAHAQLGQGSSRSMQLLQELH------RTTSLQIQGATLIAILKSCKNKSDLPA-G 364
N++I + + +S L L+ R+ ++ T ++ K+ + G
Sbjct: 75 NTLI--SSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 365 RQIHSLVMK--SSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYK 422
R +H+ V+K V+H V ALV Y+ CG++ +A F I D ++W++++ Y
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA 192
Query: 423 QNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVY 482
+ E+ + + SL I SC+ L G HV+ +K+ + +
Sbjct: 193 NSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF 252
Query: 483 VGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG 542
VG+S+ID+Y+KCG + ++KVFD + + YNAMI G A HG ++ IE++ L G
Sbjct: 253 VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQG 312
Query: 543 VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA 602
+ P+ TF+ +SACSH+G +++ L +F M Y I+P+ EHY CLVD GR+GRLEEA
Sbjct: 313 LVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEA 372
Query: 603 YQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEE 659
+ ++K + + WR+ L + + H + + GE + K ++ L + +Y+LLSNIY
Sbjct: 373 EECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGV 432
Query: 660 GKWEEARDCREKMAKTGVKKDPGSSWL 686
+W + RE M V K PG S L
Sbjct: 433 NRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 164/332 (49%), Gaps = 22/332 (6%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPK---AFQLFNDM---RVMDERPNEYTFSVLLRACATP 54
+P+ +V + TLISS + + + AF L++ + R RPNE+T+ L +A
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD 125
Query: 55 ALWNV---GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAW 111
A W+ L H + + D+F ++LV Y+N G LR+A +F + E DL W
Sbjct: 126 AQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCG-KLREARSLFERIREPDLATW 184
Query: 112 NVMISGFA---QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHG 165
N +++ +A ++ V LF M ++P+ + V+L+K C+ LGE ++ H
Sbjct: 185 NTLLAAYANSEEIDSDEEVLLLFMRM----QVRPNELSLVALIKSCANLGEFVRGVWAHV 240
Query: 166 LASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEE 225
K + V ++++DLY+KCG +S RK+FD M ++D ++++I G V+ G+E
Sbjct: 241 YVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQE 300
Query: 226 AVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK-NGHQNDCFVASVLL 284
+ +K + Q + PD T+ AC ++ G+Q+ M G + L+
Sbjct: 301 GIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLV 360
Query: 285 TLYANFGGLRDAEKLFRRIDDK-DIVAWNSMI 315
L G L +AE+ +++ K + W S +
Sbjct: 361 DLLGRSGRLEEAEECIKKMPVKPNATLWRSFL 392
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 166/380 (43%), Gaps = 23/380 (6%)
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
QIH ++ GL + S L+++ S L A + + + +N +IS
Sbjct: 27 QIHAQIITIGLSHHTYPLSKLLHLSST--VCLSYALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 122 GDFCMVQRLFSEMWEV-----EGLKPDNRTFVSLLKCCS------TLGEVMQIHGLASKF 170
+ FS ++ ++P+ T+ SL K G + H L
Sbjct: 85 HNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLE 144
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVN---NRGEEAV 227
D V +A+V YA CG + R +F+ + E D W+++++ Y + + EE +
Sbjct: 145 PVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVL 204
Query: 228 HFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLY 287
F M +V+P++ L + +++C + + GV H ++KN + FV + L+ LY
Sbjct: 205 LLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLY 261
Query: 288 ANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGAT 347
+ G L A K+F + +D+ +N+MI A G G ++L + L + L AT
Sbjct: 262 SKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFG-QEGIELYKSL-ISQGLVPDSAT 319
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDI 406
+ + +C + + G QI + + P + LV + G++ +A + +
Sbjct: 320 FVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM 379
Query: 407 VCKDDSS-WSSIIGTYKQNG 425
K +++ W S +G+ + +G
Sbjct: 380 PVKPNATLWRSFLGSSQTHG 399
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 206/421 (48%), Gaps = 48/421 (11%)
Query: 311 WNSMILAHAQLGQGSSR----SMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQ 366
WN +I A R S+ L HR + T +L S N LP G++
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSP---DFHTFPFLLPSFHNPLHLPLGQR 83
Query: 367 IHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGM 426
H+ ++ + V +L++MYS CG + A + F D KD +W+S++ Y + G+
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 427 ESEALELCKEMLAEGIT---------------------FTSYSLP--------------- 450
+A +L EM + F LP
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 451 LCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKP 510
+S+C +L A+ GK H + K D+ +G+++IDMYAKCG +E +K+VF+A
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 511 NEV-IYNAMICGYAHHGQAKQAIEIFT-MLEKNGVTPNQVTFLAMLSACSHAGYIEDTLN 568
+V Y+AMIC A +G + ++F+ M + + PN VTF+ +L AC H G I + +
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 569 LFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNH 625
F +M+ ++ I P +HY C+VD YGR+G ++EA + E W +LLS R
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 626 NNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSW 685
+ K E + K++IEL+P + +Y+LLSN+Y + G+W E + R +M G+ K PG S+
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 686 L 686
+
Sbjct: 444 V 444
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 159/359 (44%), Gaps = 46/359 (12%)
Query: 9 WTTLISSHLRAGSVPK---AFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
W +I + + S P+ ++ MR P+ +TF LL + P +G + H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHD----------------------- 102
++ GL++D F +SL+ MYS+ G +LR A VF D
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCG-DLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 103 --------LLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEG----LKPDNRTFVSL 150
+ ER++++W+ +I+G+ G + LF EM + ++P+ T ++
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 151 LKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSM-EEKD 206
L C LG + Q +H K+ E D V+ +A++D+YAKCG + +++F+++ +KD
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDM-CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
+S++I + +E F +M + P+ L ACV +N G
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 266 GQMIKN-GHQNDCFVASVLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMILAHAQLG 322
MI+ G ++ LY G +++AE + + D++ W S++ LG
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 128/277 (46%), Gaps = 35/277 (12%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-----RPNEYTFSVLLRACATPA 55
MP RNV++W+ LI+ ++ G +A LF +M++ RPNE+T S +L AC
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 56 LWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL-LERDLVAWNVM 114
G +H + + +E D G++L+ MY+ GS L A VF+ L ++D+ A++ M
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGS-LERAKRVFNALGSKKDVKAYSAM 272
Query: 115 ISGFAQVG--DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLAS 168
I A G D C +LFSEM + + P++ TFV +L C G + + +
Sbjct: 273 ICCLAMYGLTDECF--QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE 330
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISGYTVNNRGEEAV 227
+FG MVDLY + G + SM E D +W S++SG
Sbjct: 331 EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG----------- 379
Query: 228 HFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
R+ D L+ +E++ +N+G V
Sbjct: 380 --------SRMLGDIKTCEGALKRLIELDPMNSGAYV 408
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 142/295 (48%), Gaps = 10/295 (3%)
Query: 139 GLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKI 198
GL D SLL S+ G++ + G++ D +++V+ YAK G + RK+
Sbjct: 92 GLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK-DLPAWNSVVNAYAKAGLIDDARKL 150
Query: 199 FDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR-----VKPDQHVLSSTLRACV 253
FD M E++ WS +I+GY + + +EA+ F++M + V+P++ +S+ L AC
Sbjct: 151 FDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACG 210
Query: 254 EIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRI-DDKDIVAWN 312
+ L G VH + K + D + + L+ +YA G L A+++F + KD+ A++
Sbjct: 211 RLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYS 270
Query: 313 SMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVM 372
+MI A G + QL E+ + ++ T + IL +C ++ + G+ +++
Sbjct: 271 AMICCLAMYGL-TDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMI 329
Query: 373 KSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDS-SWSSIIGTYKQNG 425
+ P++ +V +Y G I +A + + D W S++ + G
Sbjct: 330 EEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 158/365 (43%), Gaps = 41/365 (11%)
Query: 206 DNFVWSSIISGYTVNNRGEE---AVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGV 262
++F+W+ II N + + + M RV PD H L + L G
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 263 QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLG 322
+ H Q++ G D FV + LL +Y++ G LR A+++F KD+ AWNS++ A+A+ G
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 323 ------------------------------QGSSRSMQLLQELHRTTS----LQIQGATL 348
++ L +E+ ++ T+
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
+L +C L G+ +H+ + K V ++G AL+ MY++CG + A + F +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 409 KDD-SSWSSIIGTYKQNGMESEALELCKEM-LAEGITFTSYSLPLCISSCSQLLAINVGK 466
K D ++S++I G+ E +L EM ++ I S + + +C IN GK
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 467 QFHVFAIKS-GYNHDVYVGSSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMICGYAH 524
+ I+ G + ++D+Y + G +++++ + ++P+ +I+ +++ G
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 525 HGQAK 529
G K
Sbjct: 383 LGDIK 387
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 184/308 (59%), Gaps = 9/308 (2%)
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLA-EGI 442
N ++ + G+ G A K + ++ +W+ +IG Y +N EAL+ K ML+ I
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 443 TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKK 502
+S +++C++L ++ K H I SG + + S+++D+YAKCG + S++
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 503 VFDAQVKPNEV-IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG 561
VF + VK N+V I+NAMI G+A HG A +AI +F+ +E V+P+ +TFL +L+ CSH G
Sbjct: 222 VFYS-VKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 562 YIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTL 618
+E+ F LM ++ I+P+ EHY +VD GRAGR++EAY++++ E WR+L
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 619 LSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVK 678
LS+ R + N ++GE + + + + D Y+LLSNIY KWE A+ RE M+K G++
Sbjct: 341 LSSSRTYKNPELGEIAIQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 679 KDPGSSWL 686
K G SWL
Sbjct: 398 KAKGKSWL 405
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 5/222 (2%)
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG 158
V + +++++ WN+MI G+ + + + M +KP+ +F S L C+ LG
Sbjct: 120 VLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLG 179
Query: 159 EVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIIS 215
++ +H L G E +A++SSA+VD+YAKCGD+ + R++F S++ D +W+++I+
Sbjct: 180 DLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMIT 239
Query: 216 GYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN-GHQ 274
G+ + EA+ F +M + V PD L C L G + G M + Q
Sbjct: 240 GFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQ 299
Query: 275 NDCFVASVLLTLYANFGGLRDAEKLFRRID-DKDIVAWNSMI 315
++ L G +++A +L + + D+V W S++
Sbjct: 300 PKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 11/234 (4%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQ-LFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQ 62
+NV+TW +I ++R +A + L N + D +PN+++F+ L ACA +
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVG 122
+H +++ SG+E + S+LV +Y+ G ++ + VF+ + D+ WN MI+GFA G
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCG-DIGTSREVFYSVKRNDVSIWNAMITGFATHG 245
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLAS-KFGAETDAVV 178
R+FSEM E E + PD+ TF+ LL CS G E + GL S +F +
Sbjct: 246 LATEAIRVFSEM-EAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEH 304
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSME-EKDNFVWSSIISG---YTVNNRGEEAVH 228
AMVDL + G V ++ +SM E D +W S++S Y GE A+
Sbjct: 305 YGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQ 358
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 124/230 (53%), Gaps = 11/230 (4%)
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A+K+ R D++++ WN MI + + Q +++ L+ + T ++ + + L +C
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQ-YEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
DL + +HSL++ S + ++ +ALV +Y++CG IG + + F + D S W+
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 416 SIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF-----HV 470
++I + +G+ +EA+ + EM AE ++ S + +++CS + GK++
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMI 519
F+I+ H +++D+ + G ++++ ++ ++ ++P+ VI+ +++
Sbjct: 296 FSIQPKLEHY----GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 121/247 (48%), Gaps = 8/247 (3%)
Query: 182 MVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK-QRVKP 240
+++ K G+ +K+ + +++ W+ +I GY N + EEA+ K+M +KP
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
++ +S+L AC + DL+ VH MI +G + + ++S L+ +YA G + + ++F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
+ D+ WN+MI A G ++ ++++ E+ + T + +L +C +
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGL-ATEAIRVFSEME-AEHVSPDSITFLGLLTTCSHCGL 281
Query: 361 LPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDSS-WSSII 418
L G++ L+ + P L A+V + G++ +A++ + + D W S++
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 419 G---TYK 422
TYK
Sbjct: 342 SSSRTYK 348
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 203/395 (51%), Gaps = 36/395 (9%)
Query: 327 RSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNAL 386
+++ L ++H + +L + LKSC G +H+ +KS+ VG AL
Sbjct: 30 QALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCAL 89
Query: 387 VHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEM--------- 437
+ MY +C + A K F +I ++ W+++I Y G EA+EL + M
Sbjct: 90 LDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSF 149
Query: 438 --LAEGITFT---SY-------------------SLPLCISSCSQLLAINVGKQFHVFAI 473
+ +G+ T SY +L +S+CS + A + K+ H +A
Sbjct: 150 NAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAF 209
Query: 474 KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIE 533
++ + S +++ Y +CG + + VFD+ + V ++++I YA HG A+ A++
Sbjct: 210 RNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALK 269
Query: 534 IFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAY 593
F +E VTP+ + FL +L ACSHAG ++ L F M Y ++ +HYSCLVD
Sbjct: 270 TFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVL 329
Query: 594 GRAGRLEEAYQIVQ---KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYI 650
R GR EEAY+++Q + + W LL ACRN+ ++ E +A++++ + P + A+Y+
Sbjct: 330 SRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYV 389
Query: 651 LLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSW 685
LL IY+ G+ EEA R KM ++GVK PGSSW
Sbjct: 390 LLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 37/284 (13%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERP-NEYTFSVLLRACATPALWNVGLQI 63
+++ T +SS+ G+ +A LF M P + + FS+ L++CA +G +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
H V+S + F G +L+ MY S + A +F ++ +R+ V WN MIS + G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLS-VSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 124 FCMVQRLFSEM----------WEVEGL----------------------KPDNRTFVSLL 151
L+ M ++GL KP+ T ++L+
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 152 KCCSTLGE---VMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNF 208
CS +G + +IH A + E + S +V+ Y +CG + + +FDSME++D
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 209 VWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRAC 252
WSS+IS Y ++ E A+ F++M +V PD + L+AC
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKAC 293
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 166/381 (43%), Gaps = 64/381 (16%)
Query: 108 LVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS-----TLGEVMQ 162
L++ +S +A G+ LF +M L D F LK C+ LG +
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 163 IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNR 222
H + S F ++ V A++D+Y KC VS RK+FD + +++ VW+++IS YT +
Sbjct: 72 AHSVKSNF--LSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 223 GEEAVH---------------------------------FFKDMCKQRVKPDQHVLSSTL 249
+EAV F++ M + R KP+ L + +
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 250 RACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIV 309
AC I ++H +N + + S L+ Y G + + +F ++D+D+V
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 310 AWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHS 369
AW+S+I A+A G S +++ QE+ + + +LK+C + AG +
Sbjct: 250 AWSSLISAYALHGDAES-ALKTFQEM-ELAKVTPDDIAFLNVLKACSH-----AGLADEA 302
Query: 370 LV----------MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS-SWSSII 418
LV +++S H + LV + S G+ +A+K + K + +W +++
Sbjct: 303 LVYFKRMQGDYGLRASKDHYS----CLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL 358
Query: 419 GTYKQNGMESEALEL-CKEML 438
G + G E E E+ +E+L
Sbjct: 359 GACRNYG-EIELAEIAARELL 378
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 42/262 (16%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE----------------------- 37
+P RN V W +IS + G V +A +L+ M VM
Sbjct: 109 IPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIE 168
Query: 38 ----------RPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYS 87
+PN T L+ AC+ + + +IH R+ +E S LV Y
Sbjct: 169 FYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYG 228
Query: 88 NNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTF 147
GS + VF + +RD+VAW+ +IS +A GD + F EM E+ + PD+ F
Sbjct: 229 RCGS-IVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEM-ELAKVTPDDIAF 286
Query: 148 VSLLKCCSTLG----EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
+++LK CS G ++ + +G S +VD+ ++ G K+ +M
Sbjct: 287 LNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Query: 204 EKDNF-VWSSIISGYTVNNRGE 224
EK W +++ N GE
Sbjct: 347 EKPTAKTWGALLGA--CRNYGE 366
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 208/389 (53%), Gaps = 5/389 (1%)
Query: 299 LFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
+F + ++I +WN +I ++ G +S+S+ L + R + ++ TL IL++C
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGF-ASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 359 SDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII 418
+ +G IH L +K S V +ALV MY + G++ A K F D+ +D ++++
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 419 GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN 478
G Y Q G L + +EM G S + + +C QL A+ GK H + I+
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 479 HDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML 538
+ +G++I DMY KC ++ + VF + + + ++++I GY G + ++F +
Sbjct: 268 LGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
Query: 539 EKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGR 598
K G+ PN VTFL +LSAC+H G +E + F LM +Y I PE +HY+ + D RAG
Sbjct: 328 LKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGL 386
Query: 599 LEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNI 655
LEEA + ++ E+ +LS C+ + N ++GE+ A+++I+L P + Y+ L+ +
Sbjct: 387 LEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGL 446
Query: 656 YIEEGKWEEARDCREKMAKTGVKKDPGSS 684
Y G+++EA R+ M + + K PG S
Sbjct: 447 YSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 6/256 (2%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNV 59
MP+RN+ +W +I R+G K+ LF M R RP+++T ++LRAC+
Sbjct: 93 MPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKS 152
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
G IH + ++ G F S+LV MY + G L A +F D+ RD V + M G+
Sbjct: 153 GDLIHVLCLKLGFSSSLFVSSALVIMYVDMG-KLLHARKLFDDMPVRDSVLYTAMFGGYV 211
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDA 176
Q G+ + +F EM G D+ VSLL C LG + +HG + +
Sbjct: 212 QQGEAMLGLAMFREM-GYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGL 270
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+ +A+ D+Y KC + +F +M +D WSS+I GY ++ + F +M K+
Sbjct: 271 NLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKE 330
Query: 237 RVKPDQHVLSSTLRAC 252
++P+ L AC
Sbjct: 331 GIEPNAVTFLGVLSAC 346
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 5/281 (1%)
Query: 80 SSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEG 139
S LV YS + VF + R++ +WN++I F++ G LF MW
Sbjct: 70 SKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESC 129
Query: 140 LKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCR 196
++PD+ T +L+ CS E IH L K G + VSSA+V +Y G + R
Sbjct: 130 VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHAR 189
Query: 197 KIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIE 256
K+FD M +D+ +++++ GY + F++M D V+ S L AC ++
Sbjct: 190 KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLG 249
Query: 257 DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMIL 316
L G VHG I+ + + + +Y L A +F + +D+++W+S+IL
Sbjct: 250 ALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLIL 309
Query: 317 AHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
+ G S +L E+ + ++ T + +L +C +
Sbjct: 310 GYGLDGD-VVMSFKLFDEMLK-EGIEPNAVTFLGVLSACAH 348
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 210/405 (51%), Gaps = 23/405 (5%)
Query: 291 GGLRDAEKLFRRIDDKDIVAWNSMI---LAHAQLGQGSSRSMQLLQELHRTT-SLQIQGA 346
G + A K+F + +K++V W SMI L + L + R L E + I G
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDL-VSARRYFDLSPERDIVLWNTMISGY 100
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI 406
+ + ++ D R + S N ++ Y+ G + + F D+
Sbjct: 101 IEMGNMLEARSLFDQMPCRDVMSW-------------NTVLEGYANIGDMEACERVFDDM 147
Query: 407 VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEG-ITFTSYSLPLCISSCSQLLAINVG 465
++ SW+ +I Y QNG SE L K M+ EG + ++ L +S+C++L A + G
Sbjct: 148 PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG 207
Query: 466 KQFHVFAIKSGYNH-DVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAH 524
K H + GYN DV V +++IDMY KCG +E + +VF + + + +N MI G A
Sbjct: 208 KWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAA 267
Query: 525 HGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESE 584
HG +A+ +F ++ +G++P++VTF+ +L AC H G +ED L F M + I PE E
Sbjct: 268 HGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIE 327
Query: 585 HYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIEL 641
H C+VD RAG L +A + + K W TLL A + + IGE + +++I+L
Sbjct: 328 HCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKL 387
Query: 642 NPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
P + A++++LSNIY + G++++A + M TG KK+ G SW+
Sbjct: 388 EPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWI 432
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 163/343 (47%), Gaps = 19/343 (5%)
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFV--SLLKCCST 156
VF +++E+++V W MI+G+ D +R F L P+ + +++
Sbjct: 50 VFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD-------LSPERDIVLWNTMISGYIE 102
Query: 157 LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISG 216
+G +++ L + D + + +++ YA GD+ +C ++FD M E++ F W+ +I G
Sbjct: 103 MGNMLEARSLFDQMPCR-DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 217 YTVNNRGEEAVHFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQN 275
Y N R E + FK M + V P+ ++ L AC ++ + G VH G+
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 276 -DCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQE 334
D V + L+ +Y G + A ++F+ I +D+++WN+MI A G G + ++ L E
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG-TEALNLFHE 280
Query: 335 LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQ-IHSLVMKSSVSHPTLVGNALVHMYSEC 393
+ + + + T + +L +CK+ + G +S+ S+ +V + S
Sbjct: 281 M-KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRA 339
Query: 394 GQIGDAFKAFVDIVCKDDSS-WSSIIG---TYKQNGMESEALE 432
G + A + + K D+ W++++G YK+ + ALE
Sbjct: 340 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALE 382
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 46/275 (16%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P R++V W T+IS ++ G++ +A LF+ M C WN L
Sbjct: 86 PERDIVLWNTMISGYIEMGNMLEARSLFDQM-----------------PCRDVMSWNTVL 128
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDAC-CVFHDLLERDLVAWNVMISGFAQ 120
+ Y+N G +AC VF D+ ER++ +WN +I G+AQ
Sbjct: 129 E----------------------GYANIGD--MEACERVFDDMPERNVFSWNGLIKGYAQ 164
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFG-AETDA 176
G V F M + + P++ T +L C+ LG +H G + D
Sbjct: 165 NGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDV 224
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V +A++D+Y KCG + ++F ++ +D W+++I+G + G EA++ F +M
Sbjct: 225 NVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNS 284
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
+ PD+ L AC + + G+ M +
Sbjct: 285 GISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTD 319
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 173/394 (43%), Gaps = 27/394 (6%)
Query: 190 GDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTL 249
G ++S K+F M EK+ +W+S+I+GY +N A +F D+ +R D + ++ +
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF-DLSPER---DIVLWNTMI 97
Query: 250 RACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIV 309
+E+ ++ + QM D + +L YAN G + E++F + ++++
Sbjct: 98 SGYIEMGNMLEARSLFDQM----PCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 310 AWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHS 369
+WN +I +AQ G+ S + + + S+ AT+ +L +C G+ +H
Sbjct: 154 SWNGLIKGYAQNGR-VSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHK 212
Query: 370 LVMKSSVSHPTL-VGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMES 428
+ + V NAL+ MY +CG I A + F I +D SW+++I +G +
Sbjct: 213 YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 429 EALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG-----KQFHVFAIKSGYNHDVYV 483
EAL L EM GI+ + + +C + + G F F+I H
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEH---- 328
Query: 484 GSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICG---YAHHGQAKQAIEIFTMLE 539
++D+ ++ G + + + + VK + VI+ ++ Y + A+E LE
Sbjct: 329 CGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLE 388
Query: 540 KNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
N F+ + + AG +D L M
Sbjct: 389 PR----NPANFVMLSNIYGDAGRFDDAARLKVAM 418
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER---PNEYTFSVLLRACATPALW 57
MP RNV +W LI + + G V + F R++DE PN+ T +++L ACA +
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFK--RMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 58 NVGLQIHGVLVRSGLER-DKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMIS 116
+ G +H G + D ++L+ MY G+ + A VF + RDL++WN MI+
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA-IEIAMEVFKGIKRRDLISWNTMIN 263
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGA 172
G A G LF EM + G+ PD TFV +L C +G V + + + F
Sbjct: 264 GLAAHGHGTEALNLFHEM-KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSI 322
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK-DNFVWSSIISGYTV 219
+ +VDL ++ G ++ + + M K D +W++++ V
Sbjct: 323 MPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKV 370
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 224/447 (50%), Gaps = 20/447 (4%)
Query: 257 DLNTGVQVHGQMIKNGHQND---CFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNS 313
D++ Q+H ++ + + F+ +L L ++F + A ++F I++ WN+
Sbjct: 60 DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNT 119
Query: 314 MILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK 373
+I A A + L +++ T +LK+C G+Q+H ++K
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 179
Query: 374 SSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALEL 433
V N L+H+Y CG + A K F ++ + SW+S+I + G AL+L
Sbjct: 180 HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQL 239
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKS---GYNHDVYVGSSIIDM 490
+EM Y++ +S+C+ L ++++G H F ++ DV V +S+I+M
Sbjct: 240 FREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEM 298
Query: 491 YAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML--EKNGVTPNQV 548
Y KCG + +++VF K + +NAMI G+A HG+A++A+ F + ++ V PN V
Sbjct: 299 YCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSV 358
Query: 549 TFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
TF+ +L AC+H G++ F +M+ Y I+P EHY C+VD RAG + EA +V
Sbjct: 359 TFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMS 418
Query: 609 ---DGSESAWRTLLSA-CRNHNNTKIGEKSAKKMIELNPSDHAS-------YILLSNIYI 657
WR+LL A C+ + ++ E+ A+ +I + +S Y+LLS +Y
Sbjct: 419 MPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYA 478
Query: 658 EEGKWEEARDCREKMAKTGVKKDPGSS 684
+W + R+ M++ G++K+PG S
Sbjct: 479 SASRWNDVGIVRKLMSEHGIRKEPGCS 505
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 198/391 (50%), Gaps = 31/391 (7%)
Query: 149 SLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKC-------GDVSSCRKIFDS 201
SL + CS + ++ Q+H F T A + LY K DV+ ++FDS
Sbjct: 53 SLAETCSDMSQLKQLHA----FTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 108
Query: 202 MEEKDNFVWSSIISGYTVN-NRGEEAVHFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLN 259
+E +F+W+++I + +R EEA ++ M ++ PD+H L+AC I +
Sbjct: 109 IENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 168
Query: 260 TGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHA 319
G QVH Q++K+G D +V + L+ LY + G L A K+F + ++ +V+WNSMI A
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS---SV 376
+ G+ S ++QL +E+ R S + G T+ ++L +C L G H+ +++ V
Sbjct: 229 RFGEYDS-ALQLFREMQR--SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 377 SHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKE 436
+ LV N+L+ MY +CG + A + F + +D +SW+++I + +G EA+
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 345
Query: 437 ML--AEGITFTSYSLPLCISSCSQLLAINVGKQF-----HVFAIKSGYNHDVYVGSSIID 489
M+ E + S + + +C+ +N G+Q+ + I+ H I+D
Sbjct: 346 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEH----YGCIVD 401
Query: 490 MYAKCGHMEDS-KKVFDAQVKPNEVIYNAMI 519
+ A+ G++ ++ V +KP+ VI+ +++
Sbjct: 402 LIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 172/348 (49%), Gaps = 33/348 (9%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDER----PNEYTFSVLLRACATPALWNVGLQIH 64
W TLI + A V + + F R M ER P+++TF +L+ACA ++ G Q+H
Sbjct: 117 WNTLIRAC--AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVH 174
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
+V+ G D + + L+++Y + G L A VF ++ ER LV+WN MI + G++
Sbjct: 175 CQIVKHGFGGDVYVNNGLIHLYGSCGC-LDLARKVFDEMPERSLVSWNSMIDALVRFGEY 233
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF-------GAETDAV 177
+LF EM +PD T S+L C+ LG + + A F D +
Sbjct: 234 DSALQLFREMQ--RSFEPDGYTMQSVLSACAGLGS-LSLGTWAHAFLLRKCDVDVAMDVL 290
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
V ++++++Y KCG + ++F M+++D W+++I G+ + R EEA++FF M +R
Sbjct: 291 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 350
Query: 238 --VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASV-----LLTLYANF 290
V+P+ L AC +N G Q M+++ C ++ ++ L A
Sbjct: 351 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDY----CIEPALEHYGCIVDLIARA 406
Query: 291 GGLRDAEKLFRRIDDK-DIVAWNSMILAHAQLGQGSSRSMQLLQELHR 337
G + +A + + K D V W S++ A + G S++L +E+ R
Sbjct: 407 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA----SVELSEEIAR 450
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 11/223 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R++V+W ++I + +R G A QLF +M+ E P+ YT +L ACA ++G
Sbjct: 212 MPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLG 270
Query: 61 LQIHGVLVRS---GLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISG 117
H L+R + D +SL+ MY GS LR A VF + +RDL +WN MI G
Sbjct: 271 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGS-LRMAEQVFQGMQKRDLASWNAMILG 329
Query: 118 FAQVGDFCMVQRLFSEMWE-VEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGA 172
FA G F M + E ++P++ TFV LL C+ G V + + +
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 389
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK-DNFVWSSII 214
E +VDL A+ G ++ + SM K D +W S++
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 141/302 (46%), Gaps = 13/302 (4%)
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPT---LVGNALVHMYSECGQIGDAFKAFV 404
+ ++ ++C + S L +Q+H+ ++++ + ++ + S + AF+ F
Sbjct: 51 IFSLAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 405 DIVCKDDSSWSSIIGTYKQN-GMESEALELCKEMLAEGITFT-SYSLPLCISSCSQLLAI 462
I W+++I + + EA L ++ML G + ++ P + +C+ +
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 463 NVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGY 522
+ GKQ H +K G+ DVYV + +I +Y CG ++ ++KVFD + + V +N+MI
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 523 AHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPE 582
G+ A+++F ++++ P+ T ++LSAC+ G + +L K +
Sbjct: 228 VRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 286
Query: 583 SEHY--SCLVDAYGRAGRLEEAYQIVQ--KDGSESAWRTLLSACRNHNNTKIGEKSAKKM 638
+ + L++ Y + G L A Q+ Q + ++W ++ H + +M
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 639 IE 640
++
Sbjct: 347 VD 348
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 245/477 (51%), Gaps = 45/477 (9%)
Query: 249 LRACV-EIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKD 307
LRAC + + G +H + IK G +D V S L+++Y G + A K+F + +++
Sbjct: 52 LRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERN 111
Query: 308 IVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI 367
+ WN+MI + G L L S+ T I ++K + ++ R++
Sbjct: 112 VATWNAMIGGYMSNGDAV-----LASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKAREL 166
Query: 368 HSLV---MKSSVSHPTLVG---------------------NALVH--MYSECGQIGDAFK 401
+ +K+ + ++G NA V M S +IGD +
Sbjct: 167 FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHE 226
Query: 402 A---FVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
A F + +D W+++I Y QNG +A++ M EG + ++ +S+C+Q
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQ 286
Query: 459 LLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAM 518
++VG++ H G + +V +++IDMYAKCG +E++ VF++ + N+M
Sbjct: 287 SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSM 346
Query: 519 ICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYK 578
I A HG+ K+A+E+F+ +E + P+++TF+A+L+AC H G++ + L +F+ M +
Sbjct: 347 ISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-D 405
Query: 579 IKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSA 635
+KP +H+ CL+ GR+G+L+EAY++V++ +++ LL AC+ H +T++ E+
Sbjct: 406 VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQ-V 464
Query: 636 KKMIELNPSDHASY-----ILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWLI 687
K+IE S SY +SN+Y +W+ A R +M K G++K PG S L+
Sbjct: 465 MKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLV 521
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 221/478 (46%), Gaps = 52/478 (10%)
Query: 10 TTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYT---FSVLLRACA--TPALWNVGLQIH 64
+ LI +H+ GS +A L+ +R R Y ++LRACA P + +G +H
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIR----RRGVYFPGWVPLILRACACVVPRVV-LGKLLH 69
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
++ G+ D GSSL+ MY G + A VF ++ ER++ WN MI G+ GD
Sbjct: 70 SESIKFGVCSDVMVGSSLISMYGKCGC-VVSARKVFDEMPERNVATWNAMIGGYMSNGDA 128
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGL------------------ 166
+ LF E+ + + T++ ++K E+ + L
Sbjct: 129 VLASGLFEEI----SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVML 184
Query: 167 -----------ASKFG---AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSS 212
A KF E +A V S M+ Y + GDV R IF + +D +W++
Sbjct: 185 GVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNT 244
Query: 213 IISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG 272
+I+GY N ++A+ F +M + +PD +SS L AC + L+ G +VH + G
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG 304
Query: 273 HQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLL 332
+ + FV++ L+ +YA G L +A +F I + + NSMI A G+G ++++
Sbjct: 305 IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKG-KEALEMF 363
Query: 333 QELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSE 392
+ + L+ T IA+L +C + L G +I S + V L+H+
Sbjct: 364 STME-SLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGR 422
Query: 393 CGQIGDAFKAFVDI-VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFT-SYS 448
G++ +A++ ++ V +D+ +++G K + M++E E +++ + T SYS
Sbjct: 423 SGKLKEAYRLVKEMHVKPNDTVLGALLGACKVH-MDTEMAEQVMKIIETAGSITNSYS 479
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 202/437 (46%), Gaps = 51/437 (11%)
Query: 150 LLKCCS------TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
+L+ C+ LG+++ H + KFG +D +V S+++ +Y KCG V S RK+FD M
Sbjct: 51 ILRACACVVPRVVLGKLL--HSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMP 108
Query: 204 EKDNFVWSSIISGYTVNNRGEEAVHFFKDM--CKQRVKPDQHVLSSTLRACVEIE----- 256
E++ W+++I GY N A F+++ C+ V + + R +EIE
Sbjct: 109 ERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKR--IEIEKAREL 166
Query: 257 --------------DLNTGVQVHGQMIKNGH-------QNDCFVASVLLTLYANFGGLRD 295
+ GV V+ + +++ + + FV S++++ Y G + +
Sbjct: 167 FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHE 226
Query: 296 AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
A +F R+ +D+V WN++I +AQ G S ++ + + + T+ +IL +C
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGY-SDDAIDAFFNM-QGEGYEPDAVTVSSILSAC 284
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWS 415
L GR++HSL+ + V NAL+ MY++CG + +A F I + + +
Sbjct: 285 AQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCN 344
Query: 416 SIIGTYKQNGMESEALELCKEMLA-----EGITFTSYSLPLCISSCSQLLAINVGKQFHV 470
S+I +G EALE+ M + + ITF + L C+ + + + +
Sbjct: 345 SMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAV-LTACVHGGFLMEGLKIFSEMKT 403
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMICGYAHHGQAK 529
+K H +I + + G ++++ + V + VKPN+ + A++ H +
Sbjct: 404 QDVKPNVKHF----GCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTE 459
Query: 530 QAIEIFTMLEKNGVTPN 546
A ++ ++E G N
Sbjct: 460 MAEQVMKIIETAGSITN 476
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 154/336 (45%), Gaps = 33/336 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM------------------RVMDERPNEY 42
MP RNV TW +I ++ G A LF ++ R+ E+ E
Sbjct: 107 MPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKAREL 166
Query: 43 TFSVLLRACATPALWNVGLQIH---------GVLVRSGLERDKFAGSSLVYMYSNNGSNL 93
F + W+V L ++ E++ F S ++ Y G ++
Sbjct: 167 -FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIG-DV 224
Query: 94 RDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC 153
+A +F+ + RDLV WN +I+G+AQ G F M + EG +PD T S+L
Sbjct: 225 HEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNM-QGEGYEPDAVTVSSILSA 283
Query: 154 CSTLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
C+ G + ++H L + G E + VS+A++D+YAKCGD+ + +F+S+ +
Sbjct: 284 CAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACC 343
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
+S+IS ++ +G+EA+ F M +KPD+ + L ACV L G+++ +M
Sbjct: 344 NSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKT 403
Query: 271 NGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK 306
+ + L+ L G L++A +L + + K
Sbjct: 404 QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 10/210 (4%)
Query: 415 SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLA-INVGKQFHVFAI 473
S++I + G +AL L + G+ F + +PL + +C+ ++ + +GK H +I
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHSESI 73
Query: 474 KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIE 533
K G DV VGSS+I MY KCG + ++KVFD + N +NAMI GY +G A A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 534 IFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAY 593
+F E+ V N VT++ M+ IE LF M ++ K + +S ++ Y
Sbjct: 134 LF---EEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK---NVKAWSVMLGVY 187
Query: 594 GRAGRLEEAYQIVQKDGSESA--WRTLLSA 621
++E+A + + ++A W ++S
Sbjct: 188 VNNRKMEDARKFFEDIPEKNAFVWSLMMSG 217
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 41/253 (16%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R++V W TLI+ + + G A F +M+ P+ T S +L ACA +VG ++
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGD 123
H ++ G+E ++F ++L+ MY+ G +L +A VF + R + N MIS A G
Sbjct: 297 HSLINHRGIELNQFVSNALIDMYAKCG-DLENATSVFESISVRSVACCNSMISCLAIHGK 355
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMV 183
+FS M ++ LKPD TF+++L C G +M+ GL
Sbjct: 356 GKEALEMFSTMESLD-LKPDEITFIAVLTACVHGGFLME--GL----------------- 395
Query: 184 DLYAKCGDVSSCRKIFDSMEEKDNFV----WSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
KIF M+ +D + +I + + +EA K+M VK
Sbjct: 396 -------------KIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM---HVK 439
Query: 240 PDQHVLSSTLRAC 252
P+ VL + L AC
Sbjct: 440 PNDTVLGALLGAC 452
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 219/416 (52%), Gaps = 14/416 (3%)
Query: 282 VLLTLYANFGGLRDAEKL----FR-RIDDKDIVA--WNSMILAHAQLGQGSSRSMQLLQE 334
+L TL +N L ++ FR RI D+ +A WN+++ ++ + + ++Q+
Sbjct: 49 LLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIR-HESPLDAIQVYLG 107
Query: 335 LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECG 394
+ R+T L + +L ++K+ D G+++HS+ ++ + + +Y + G
Sbjct: 108 MVRSTVLPDR-YSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAG 166
Query: 395 QIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCIS 454
+ +A K F + + SW++IIG G +EA+E+ +M G+ +++ +
Sbjct: 167 EFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTA 226
Query: 455 SCSQLLAINVGKQFH--VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNE 512
SC L +++ Q H V K+ D+ + +S+IDMY KCG M+ + +F+ + N
Sbjct: 227 SCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNV 286
Query: 513 VIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTL 572
V +++MI GYA +G +A+E F + + GV PN++TF+ +LSAC H G +E+ F +
Sbjct: 287 VSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAM 346
Query: 573 MLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTK 629
M +++++P HY C+VD R G+L+EA ++V++ + W L+ C + +
Sbjct: 347 MKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVE 406
Query: 630 IGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSW 685
+ E A M+EL P + Y++L+N+Y G W++ R+ M V K P S+
Sbjct: 407 MAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 191/405 (47%), Gaps = 44/405 (10%)
Query: 137 VEGLKPDNRT--FVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSS 194
V L P +R +LL C++L V +IHG + S ++D Y
Sbjct: 38 VTPLSPQDRNKLLATLLSNCTSLARVRRIHG----------DIFRSRILDQYPIA----- 82
Query: 195 CRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVE 254
F+W++I+ Y + +A+ + M + V PD++ L ++A V+
Sbjct: 83 -------------FLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQ 129
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSM 314
I D G ++H ++ G D F S +TLY G +A K+F ++ + +WN++
Sbjct: 130 IHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAI 189
Query: 315 ILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS 374
I G+ ++ ++++ ++ R + L+ T++++ SC DL Q+H V+++
Sbjct: 190 IGGLNHAGR-ANEAVEMFVDMKR-SGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQA 247
Query: 375 SVSHPT--LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALE 432
+ ++ N+L+ MY +CG++ A F ++ ++ SWSS+I Y NG EALE
Sbjct: 248 KTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALE 307
Query: 433 LCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHV-----FAIKSGYNHDVYVGSSI 487
++M G+ + +S+C + GK + F ++ G +H I
Sbjct: 308 CFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHY----GCI 363
Query: 488 IDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAMICGYAHHGQAKQA 531
+D+ ++ G ++++KKV + +KPN +++ ++ G G + A
Sbjct: 364 VDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 162/322 (50%), Gaps = 11/322 (3%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
W ++ S++R S A Q++ M P+ Y+ ++++A + +G ++H V V
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 69 RSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQ 128
R G D+F S + +Y G +A VF + ER L +WN +I G G
Sbjct: 145 RLGFVGDEFCESGFITLYCKAG-EFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 129 RLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHG--LASKFGAETDAVVSSAMV 183
+F +M + GL+PD+ T VS+ C LG++ Q+H L +K ++D ++ ++++
Sbjct: 204 EMFVDM-KRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLI 262
Query: 184 DLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQH 243
D+Y KCG + IF+ M +++ WSS+I GY N EA+ F+ M + V+P++
Sbjct: 263 DMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKI 322
Query: 244 VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA--SVLLTLYANFGGLRDAEKLFR 301
L ACV + G + + M+K+ + + ++ ++ L + G L++A+K+
Sbjct: 323 TFVGVLSACVHGGLVEEG-KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Query: 302 RIDDK-DIVAWNSMILAHAQLG 322
+ K +++ W ++ + G
Sbjct: 382 EMPMKPNVMVWGCLMGGCEKFG 403
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 9/222 (4%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P R + +W +I AG +A ++F DM+ P+++T + +C ++
Sbjct: 179 PERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAF 238
Query: 62 QIHGVLVRSGLER--DKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFA 119
Q+H ++++ E D +SL+ MY G + A +F ++ +R++V+W+ MI G+A
Sbjct: 239 QLHKCVLQAKTEEKSDIMMLNSLIDMYGKCG-RMDLASHIFEEMRQRNVVSWSSMIVGYA 297
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLASKFGAETD 175
G+ F +M E G++P+ TFV +L C G V + + S+F E
Sbjct: 298 ANGNTLEALECFRQMREF-GVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPG 356
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN-FVWSSIISG 216
+VDL ++ G + +K+ + M K N VW ++ G
Sbjct: 357 LSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M RNVV+W+++I + G+ +A + F MR RPN+ TF +L AC L G
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 61 LQIHGVLVRSGLERDKFAG--SSLVYMYSNNGSNLRDACCVFHDL-LERDLVAWNVMISG 117
+ + +++S E + +V + S +G L++A V ++ ++ +++ W ++ G
Sbjct: 341 -KTYFAMMKSEFELEPGLSHYGCIVDLLSRDG-QLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Query: 118 FAQVGDFCMVQRLFSEMWEVE 138
+ GD M + + M E+E
Sbjct: 399 CEKFGDVEMAEWVAPYMVELE 419
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 241/483 (49%), Gaps = 46/483 (9%)
Query: 244 VLSSTLR-ACVEIEDLNTGVQVHGQMIKNG-HQNDCFVASVL-LTLYANFGGLRDAEKLF 300
V S LR C + +L ++H +I G + + FV+ L + ++ G + A K
Sbjct: 9 VAKSILRHQCKSMSEL---YKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFL 65
Query: 301 RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSD 360
++ D WN +I + + +S+ + ++ R L T ++KS S+
Sbjct: 66 SKLSDPPNYGWNFVIRGFSN-SRNPEKSISVYIQMLRF-GLLPDHMTYPFLMKSSSRLSN 123
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMY------------------------------ 390
G +H V+KS + + N L+HMY
Sbjct: 124 RKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDA 183
Query: 391 -SECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT-FTSYS 448
++ G + A F ++ +D +WSS+I Y + G ++ALE+ +M+ G + +
Sbjct: 184 YAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVT 243
Query: 449 LPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQ 507
+ I +C+ L A+N GK H + + V + +S+IDMYAKCG + D+ VF A
Sbjct: 244 MVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRAS 303
Query: 508 VKPNE-VIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDT 566
VK + +++NA+I G A HG ++++++F + ++ + P+++TFL +L+ACSH G +++
Sbjct: 304 VKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEA 363
Query: 567 LNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACR 623
+ F L + +P+SEHY+C+VD RAG +++A+ + + + S LL+ C
Sbjct: 364 WHFFK-SLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCI 422
Query: 624 NHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGS 683
NH N ++ E KK+IEL P + Y+ L+N+Y ++ AR RE M K GVKK G
Sbjct: 423 NHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGH 482
Query: 684 SWL 686
S L
Sbjct: 483 SIL 485
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 188/413 (45%), Gaps = 35/413 (8%)
Query: 154 CSTLGEVMQIHGLASKFG-AETDAVVSSAM-VDLYAKCGDVSSCRKIFDSMEEKDNFVWS 211
C ++ E+ +IH L G +E + VS + + GDV K + + N+ W+
Sbjct: 18 CKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWN 77
Query: 212 SIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN 271
+I G++ + E+++ + M + + PD +++ + + G +H ++K+
Sbjct: 78 FVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS 137
Query: 272 GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSS----- 326
G + D F+ + L+ +Y +F A KLF + K++V WNS++ A+A+ G S
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVF 197
Query: 327 -------------------------RSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
+++++ ++ R S + T+++++ +C + L
Sbjct: 198 DEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGAL 257
Query: 362 PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS--WSSIIG 419
G+ +H ++ + ++ +L+ MY++CG IGDA+ F K+ + W++IIG
Sbjct: 258 NRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
Query: 420 TYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH 479
+G E+L+L +M I + +++CS + F +SG
Sbjct: 318 GLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEP 377
Query: 480 DVYVGSSIIDMYAKCGHMEDSKK-VFDAQVKPNEVIYNAMICGYAHHGQAKQA 531
+ ++D+ ++ G ++D+ + + +KP + A++ G +HG + A
Sbjct: 378 KSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 35/279 (12%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
W +I + + K+ ++ M P+ T+ L+++ + + +G +H +V
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 69 RSGLERDKFAGSSLVYMYSN------------------------------NGSNLRDACC 98
+SGLE D F ++L++MY + ++ A
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG 158
VF ++ ERD+V W+ MI G+ + G++ +F +M + K + T VS++ C+ LG
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 159 EVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIF--DSMEEKDNFVWSSI 213
+ + +H ++ ++++D+YAKCG + +F S++E D +W++I
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 214 ISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRAC 252
I G + E++ F M + ++ PD+ L AC
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAAC 354
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 41/334 (12%)
Query: 62 QIHGVLVRSGL-ERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+IH +L+ GL E + F +L + ++ ++ A L + WN +I GF+
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFGAETDAV 177
+ ++ +M GL PD+ T+ L+K S L +H K G E D
Sbjct: 86 SRNPEKSISVYIQMLRF-GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLF 144
Query: 178 VSSAMV-------------------------------DLYAKCGDVSSCRKIFDSMEEKD 206
+ + ++ D YAK GDV S R +FD M E+D
Sbjct: 145 ICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERD 204
Query: 207 NFVWSSIISGYTVNNRGEEAVHFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
WSS+I GY +A+ F M + K ++ + S + AC + LN G VH
Sbjct: 205 VVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVH 264
Query: 266 GQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRR--IDDKDIVAWNSMILAHAQLGQ 323
++ + + L+ +YA G + DA +F R + + D + WN++I A G
Sbjct: 265 RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG- 323
Query: 324 GSSRSMQLLQELHRTTSLQIQGATLIAILKSCKN 357
S+QL ++ R + + T + +L +C +
Sbjct: 324 FIRESLQLFHKM-RESKIDPDEITFLCLLAACSH 356
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 8/211 (3%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFND-MRVMDERPNEYTFSVLLRACATPALWNV 59
M R+VVTW+++I +++ G KA ++F+ MR+ + NE T ++ ACA N
Sbjct: 200 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 259
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFH--DLLERDLVAWNVMISG 117
G +H ++ L +SL+ MY+ GS + DA VF+ + E D + WN +I G
Sbjct: 260 GKTVHRYILDVHLPLTVILQTSLIDMYAKCGS-IGDAWSVFYRASVKETDALMWNAIIGG 318
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQI-HGLAS--KFGAET 174
A G +LF +M E + + PD TF+ LL CS G V + H S + GAE
Sbjct: 319 LASHGFIRESLQLFHKMRESK-IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEP 377
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
+ + MVD+ ++ G V M K
Sbjct: 378 KSEHYACMVDVLSRAGLVKDAHDFISEMPIK 408
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 225/492 (45%), Gaps = 57/492 (11%)
Query: 246 SSTLRACVEIEDLNTGVQVHGQMIKNGH------QNDCF------VASVLLTLYANFGGL 293
S L+ C ++ L+ Q H Q I +G QN F + S+ + A+ +
Sbjct: 8 SYLLKLCRTLKHLH---QFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVV 64
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
A +FR I + +N++I S S + E+ R S+ T + K
Sbjct: 65 SYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRR-SVPPDFHTFPFVFK 123
Query: 354 SC--KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF-----VDI 406
+C K DL + +H ++ + N L+ +YS I A + F D+
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV 183
Query: 407 VC--------------------------KDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
V +D SW+S+I Y Q EA++L EM+A
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVAL 243
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
G+ + ++ +S+C+Q GK H + + D ++ + ++D YAKCG ++ +
Sbjct: 244 GLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTA 303
Query: 501 KKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHA 560
++F+ +NAMI G A HG + ++ F + +G+ P+ VTF+++L CSH+
Sbjct: 304 MEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHS 363
Query: 561 GYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ---KDGSES---- 613
G +++ NLF M Y + E +HY C+ D GRAG +EEA ++++ KDG
Sbjct: 364 GLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLL 423
Query: 614 AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMA 673
AW LL CR H N +I EK+A ++ L+P D Y ++ +Y +WEE RE +
Sbjct: 424 AWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIID 483
Query: 674 K-TGVKKDPGSS 684
+ VKK+ G S
Sbjct: 484 RDKKVKKNVGFS 495
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 36/261 (13%)
Query: 27 QLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL--QIHGVLVRSGLERDKFAGSSLVY 84
+ F +MR P+ +TF + +ACA ++ L +H +R GL D F ++L+
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIR 160
Query: 85 MYS-----NNGSNLRD-------------------------ACCVFHDLLERDLVAWNVM 114
+YS ++ L D A +F + RDLV+WN +
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 115 ISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ---IHGLASKFG 171
ISG+AQ+ +LF EM + GLKPDN VS L C+ G+ + IH +
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVAL-GLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKR 279
Query: 172 AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFK 231
D+ +++ +VD YAKCG + + +IF+ +K F W+++I+G ++ GE V +F+
Sbjct: 280 LFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFR 339
Query: 232 DMCKQRVKPDQHVLSSTLRAC 252
M +KPD S L C
Sbjct: 340 KMVSSGIKPDGVTFISVLVGC 360
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 10/249 (4%)
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSA 181
GD +V+ L + GL D T +L++ S + + L + + D V +
Sbjct: 131 GDLTLVKTLHCQALRF-GLLSDLFTLNTLIRVYSLIAPIDSALQLFDE-NPQRDVVTYNV 188
Query: 182 MVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPD 241
++D K ++ R++FDSM +D W+S+ISGY N EA+ F +M +KPD
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFR 301
+ STL AC + D G +H + D F+A+ L+ YA G + A ++F
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 302 RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHR---TTSLQIQGATLIAILKSCKNK 358
DK + WN+MI A G G +L + R ++ ++ G T I++L C +
Sbjct: 309 LCSDKTLFTWNAMITGLAMHGNG-----ELTVDYFRKMVSSGIKPDGVTFISVLVGCSHS 363
Query: 359 SDLPAGRQI 367
+ R +
Sbjct: 364 GLVDEARNL 372
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 11/235 (4%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP R++V+W +LIS + + +A +LF++M + +P+ L ACA W G
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKG 268
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
IH R L D F + LV Y+ G + A +F ++ L WN MI+G A
Sbjct: 269 KAIHDYTKRKRLFIDSFLATGLVDFYAKCGF-IDTAMEIFELCSDKTLFTWNAMITGLAM 327
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS- 179
G+ + F +M G+KPD TF+S+L CS G V + L + + D
Sbjct: 328 HGNGELTVDYFRKMVS-SGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREM 386
Query: 180 ---SAMVDLYAKCGDVSSCRKIFDSMEEKDN-----FVWSSIISGYTVNNRGEEA 226
M DL + G + ++ + M + WS ++ G ++ E A
Sbjct: 387 KHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIA 441
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 145/357 (40%), Gaps = 52/357 (14%)
Query: 150 LLKCCSTLGEVMQIHG-------LASKFG-----AETDAVVSSAMVDLYAKCGDVSSCRK 197
LLK C TL + Q H +++ F A ++S A VS
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 198 IFDSMEEKDNFVWSSIISGYTVNNRGE-EAVHFFKDMCKQRVKPDQHVLSSTLRACVEIE 256
+F + F +++II T++ + FF +M ++ V PD H +AC +
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 257 --DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL------------RD------- 295
DL +H Q ++ G +D F + L+ +Y+ + RD
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 296 ------------AEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI 343
A +LF + +D+V+WNS+I +AQ+ +++L E+ L+
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNH-CREAIKLFDEM-VALGLKP 247
Query: 344 QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF 403
+++ L +C D G+ IH + + + + LV Y++CG I A + F
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF 307
Query: 404 VDIVCKDDS--SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
+C D + +W+++I +G ++ ++M++ GI + + CS
Sbjct: 308 E--LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSH 362
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 222/454 (48%), Gaps = 37/454 (8%)
Query: 263 QVHGQMIKNG-HQNDCFVASVLLTLYANFGGLRDAEKL-----FRRIDDKDIVAWNSMIL 316
Q+H Q++ NG H N F L+ Y + + KL F R D +N+++
Sbjct: 26 QIHAQLVINGCHDNSLF--GKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLFNTLLK 83
Query: 317 AHAQLGQGSSRSMQLLQELHRTTSL-QIQGATLIAIL---KSCKNKSDLPAGRQIHSLVM 372
S+++ +SL + T + +L + S L GR +H +V
Sbjct: 84 CSK-----PEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVK 138
Query: 373 KSSVSHPT-LVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTY-----KQNGM 426
K + + L+G L+H Y++ G + A K F ++ + +W+++IG Y K N
Sbjct: 139 KLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHN 198
Query: 427 ESEALELCKEM--LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH--DVY 482
+A+ L + G+ T ++ +S+ SQ + +G H + K G+ DV+
Sbjct: 199 ARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVF 258
Query: 483 VGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG 542
+G++++DMY+KCG + ++ VF+ N + +M G A +G+ + + + ++G
Sbjct: 259 IGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESG 318
Query: 543 VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA 602
+ PN++TF ++LSA H G +E+ + LF M ++ + P EHY C+VD G+AGR++EA
Sbjct: 319 IKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEA 378
Query: 603 YQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHA-------SYILL 652
YQ + R+L +AC + T +GE+ K ++E+ D Y+ L
Sbjct: 379 YQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVAL 438
Query: 653 SNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
SN+ +GKW E R++M + +K PG S++
Sbjct: 439 SNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 125/246 (50%), Gaps = 20/246 (8%)
Query: 40 NEYTFSVLL---RACATPALWNVGLQIHGVLVRSG-LERDKFAGSSLVYMYSNNGSNLRD 95
NE TF +L A+ + VG +HG++ + G L + G++L++ Y+ NG +LR
Sbjct: 107 NERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNG-DLRY 165
Query: 96 ACCVFHDLLERDLVAWNVMISGFAQVGD--------FCMVQRLFSEMWEVEGLKPDNRTF 147
A VF ++ ER V WN MI G+ D ++ R FS G++P + T
Sbjct: 166 ARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGS--GVRPTDTTM 223
Query: 148 VSLLKCCSTLGEV---MQIHGLASKFG--AETDAVVSSAMVDLYAKCGDVSSCRKIFDSM 202
V +L S G + +HG K G E D + +A+VD+Y+KCG +++ +F+ M
Sbjct: 224 VCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELM 283
Query: 203 EEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGV 262
+ K+ F W+S+ +G +N RG E + M + +KP++ +S L A I + G+
Sbjct: 284 KVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGI 343
Query: 263 QVHGQM 268
++ M
Sbjct: 344 ELFKSM 349
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 125/261 (47%), Gaps = 13/261 (4%)
Query: 163 IHGLASKFGAETDA-VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTV-- 219
+HG+ K G ++ ++ + ++ YAK GD+ RK+FD M E+ + W+++I GY
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK 192
Query: 220 ---NNRGEEAVHFFKDM--CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH- 273
N+ +A+ F+ C V+P + L A + L G VHG + K G
Sbjct: 193 DKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFT 252
Query: 274 -QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLL 332
+ D F+ + L+ +Y+ G L +A +F + K++ W SM A G+G + + LL
Sbjct: 253 PEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRG-NETPNLL 311
Query: 333 QELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQI-HSLVMKSSVSHPTLVGNALVHMYS 391
+ + ++ T ++L + ++ + G ++ S+ + V+ +V +
Sbjct: 312 NRMAE-SGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLG 370
Query: 392 ECGQIGDAFKAFVDIVCKDDS 412
+ G+I +A++ + + K D+
Sbjct: 371 KAGRIQEAYQFILAMPIKPDA 391
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 15/222 (6%)
Query: 1 MPHRNVVTWTTLIS---SHLRAGS--VPKAFQLFNDMRVMDE--RPNEYTFSVLLRACAT 53
MP R VTW +I SH G+ KA LF RP + T +L A +
Sbjct: 173 MPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQ 232
Query: 54 PALWNVGLQIHGVLVRSGL--ERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAW 111
L +G +HG + + G E D F G++LV MYS G L +A VF + +++ W
Sbjct: 233 TGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGC-LNNAFSVFELMKVKNVFTW 291
Query: 112 NVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ----IHGLA 167
M +G A G L + M E G+KP+ TF SLL +G V + +
Sbjct: 292 TSMATGLALNGRGNETPNLLNRMAE-SGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMK 350
Query: 168 SKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
++FG +VDL K G + + +M K + +
Sbjct: 351 TRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAI 392
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 175/312 (56%), Gaps = 7/312 (2%)
Query: 382 VGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALE--LCKEMLA 439
V NA++ Y G + A + F + K+ +SW+++I + QNG SEAL+ LC E
Sbjct: 150 VWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEK-D 208
Query: 440 EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMED 499
+ + ++ + +C+ L + +G++ +A ++G+ ++YV ++ I+MY+KCG ++
Sbjct: 209 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 268
Query: 500 SKKVFDA-QVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACS 558
+K++F+ + N +N+MI A HG+ +A+ +F + + G P+ VTF+ +L AC
Sbjct: 269 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACV 328
Query: 559 HAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAW 615
H G + LF M +KI P+ EHY C++D GR G+L+EAY +++ W
Sbjct: 329 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 388
Query: 616 RTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKT 675
TLL AC H N +I E +++ + +L P++ + +++SNIY KW+ R+ M K
Sbjct: 389 GTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKE 448
Query: 676 GVKKDPGSSWLI 687
+ K G S+ +
Sbjct: 449 TMTKAAGYSYFV 460
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 163/373 (43%), Gaps = 41/373 (10%)
Query: 196 RKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEI 255
RK+FD + F+++ +I Y V+++ E++ + + ++P H + A
Sbjct: 36 RKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASF 95
Query: 256 EDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI 315
+H Q ++G ++D F + L+T YA G L A ++F + +D+ WN+MI
Sbjct: 96 SSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMI 155
Query: 316 LAHAQLGQ------------------------------GSSRSMQLLQELHRTTSLQIQG 345
+ + G S ++++ + + S++
Sbjct: 156 TGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNH 215
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVD 405
T++++L +C N +L GR++ ++ V NA + MYS+CG I A + F +
Sbjct: 216 ITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEE 275
Query: 406 IVCKDD-SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINV 464
+ + + SW+S+IG+ +G EAL L +ML EG + + + +C +
Sbjct: 276 LGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVK 335
Query: 465 GKQF-----HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-VKPNEVIYNAM 518
G++ V I H +ID+ + G ++++ + +KP+ V++ +
Sbjct: 336 GQELFKSMEEVHKISPKLEH----YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTL 391
Query: 519 ICGYAHHGQAKQA 531
+ + HG + A
Sbjct: 392 LGACSFHGNVEIA 404
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 189/442 (42%), Gaps = 78/442 (17%)
Query: 3 HRNVVT--WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
H+N T + LI ++ ++ L+N + RP+ +TF+ + A A+ +
Sbjct: 42 HQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPL 101
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+H RSG E D F CC +I+ +A+
Sbjct: 102 RLLHSQFFRSGFESDSF-------------------CCT-------------TLITAYAK 129
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
+G C +R+F EM ++ D V +
Sbjct: 130 LGALCCARRVFDEM-------------------------------------SKRDVPVWN 152
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR-VK 239
AM+ Y + GD+ + ++FDSM K+ W+++ISG++ N EA+ F M K + VK
Sbjct: 153 AMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVK 212
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
P+ + S L AC + +L G ++ G +NG ++ +V + + +Y+ G + A++L
Sbjct: 213 PNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRL 272
Query: 300 FRRI-DDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
F + + +++ +WNSMI + A G+ ++ L ++ R + T + +L +C +
Sbjct: 273 FEELGNQRNLCSWNSMIGSLATHGK-HDEALTLFAQMLREGE-KPDAVTFVGLLLACVHG 330
Query: 359 SDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDS-SWSS 416
+ G+++ + + P L ++ + G++ +A+ + K D+ W +
Sbjct: 331 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 390
Query: 417 IIGTYKQNGMESEALELCKEML 438
++G +G E E+ E L
Sbjct: 391 LLGACSFHG-NVEIAEIASEAL 411
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDM-RVMDERPNEYTFSVLLRACATPALWNV 59
MP +NV +WTT+IS + G+ +A ++F M + +PN T +L ACA +
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 60 GLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL-LERDLVAWNVMISGF 118
G ++ G +G + + ++ + MYS G + A +F +L +R+L +WN MI
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGM-IDVAKRLFEELGNQRNLCSWNSMIGSL 292
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM----------QIHGLAS 168
A G LF++M EG KPD TFV LL C G V+ ++H ++
Sbjct: 293 ATHGKHDEALTLFAQMLR-EGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISP 351
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK-DNFVWSSIISGYTVNNRGEEA 226
K M+DL + G + + +M K D VW +++ + + E A
Sbjct: 352 KLEH------YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 220/468 (47%), Gaps = 44/468 (9%)
Query: 255 IEDLNTGV---QVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAW 311
+ED N+ QVH ++I +G+ D A LL + FG ++R I +
Sbjct: 29 VEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCA 86
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV 371
N + A+ + +++ ++ R + T ++++ + + +G+ H
Sbjct: 87 NPVFKAYL-VSSSPKQALGFYFDILRFGFVP-DSYTFVSLISCIEKTCCVDSGKMCHGQA 144
Query: 372 MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNG------ 425
+K V N+L+HMY+ CG + A K FV+I +D SW+SII +NG
Sbjct: 145 IKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAH 204
Query: 426 -------------------------MESEALELCKEMLAEGITFTSYSLPLCISSCSQLL 460
++ L +EM+ G +L L +++C +
Sbjct: 205 KLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSA 264
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMIC 520
+ G+ H I++ N V + +++IDMY KC + ++++FD+ N+V +N MI
Sbjct: 265 RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMIL 324
Query: 521 GYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIK 580
+ HG+ + +E+F + + P++VTF+ +L C+ AG + + ++LM+ +++IK
Sbjct: 325 AHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Query: 581 PESEHYSCLVDAYGRAGRLEEAYQIVQKDGSE------SAWRTLLSACRNHNNTKIGEKS 634
P H C+ + Y AG EEA + ++ E + W LLS+ R N +GE
Sbjct: 385 PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESI 444
Query: 635 AKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPG 682
AK +IE +P ++ Y LL NIY G+WE+ RE + + + + PG
Sbjct: 445 AKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPG 492
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 210/493 (42%), Gaps = 79/493 (16%)
Query: 150 LLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
L++ +++ + Q+H G D+ + ++ ++ GD S I+ S+ + +
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKL--YC 85
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIED-LNTGVQVHGQM 268
+ + Y V++ ++A+ F+ D+ + PD + S L +C+E +++G HGQ
Sbjct: 86 ANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVS-LISCIEKTCCVDSGKMCHGQA 144
Query: 269 IKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSM-------------- 314
IK+G V + L+ +Y G L A+KLF I +DIV+WNS+
Sbjct: 145 IKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAH 204
Query: 315 ---------------ILAHAQLGQGSSR-SMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
I+ A LG + S+ L +E+ R Q +TL+ +L +C
Sbjct: 205 KLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVR-AGFQGNESTLVLLLNACGRS 263
Query: 359 SDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII 418
+ L GR +H+ ++++ ++ ++ AL+ MY +C ++G A + F + ++ +W+ +I
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI 323
Query: 419 GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYN 478
+ +G LEL + M+ + + + C++ ++ G+ ++
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYY--------- 374
Query: 479 HDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTML 538
S ++D + Q+KPN M Y+ G ++A E L
Sbjct: 375 ------SLMVDEF---------------QIKPNFGHQWCMANLYSSAGFPEEAEEALKNL 413
Query: 539 EKNGVTPNQVTFLAMLSACSHAG------YIEDTLNLFTLMLYKYKIKPESEHYSCLVDA 592
VTP + +LS+ G I +L + YKY Y L++
Sbjct: 414 PDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKY--------YHLLMNI 465
Query: 593 YGRAGRLEEAYQI 605
Y GR E+ ++
Sbjct: 466 YSVTGRWEDVNRV 478
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 156/367 (42%), Gaps = 56/367 (15%)
Query: 12 LISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSG 71
+ ++L + S +A + D+ P+ YTF L+ + G HG ++ G
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 72 LERDKFAGSSLVYMYSNNGS------------------------------NLRDACCVFH 101
++ +SL++MY+ G+ ++ A +F
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 102 DLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLG 158
++ ++++++WN+MIS + + + LF EM G + + T V LL C + L
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRA-GFQGNESTLVLLLNACGRSARLK 267
Query: 159 EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYT 218
E +H + + V+ +A++D+Y KC +V R+IFDS+ ++ W+ +I +
Sbjct: 268 EGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHC 327
Query: 219 VNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN------- 271
++ R E + F+ M ++PD+ L C ++ G + M+
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNF 387
Query: 272 GHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA----W-----NSMILAHAQLG 322
GHQ + LY++ G +AE+ + + D+D+ W +S + LG
Sbjct: 388 GHQ------WCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLG 441
Query: 323 QGSSRSM 329
+ ++S+
Sbjct: 442 ESIAKSL 448
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 152/361 (42%), Gaps = 46/361 (12%)
Query: 139 GLKPDNRTFVSLLKC-----CSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCG--- 190
G PD+ TFVSL+ C C G++ HG A K G + V ++++ +Y CG
Sbjct: 113 GFVPDSYTFVSLISCIEKTCCVDSGKM--CHGQAIKHGCDQVLPVQNSLMHMYTCCGALD 170
Query: 191 ----------------------------DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNR 222
DV + K+FD M +K+ W+ +IS Y N
Sbjct: 171 LAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANN 230
Query: 223 GEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASV 282
++ F++M + + ++ L L AC L G VH +I+ + + +
Sbjct: 231 PGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTA 290
Query: 283 LLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQ 342
L+ +Y + A ++F + ++ V WN MILAH G+ ++L + + L+
Sbjct: 291 LIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEG-GLELFEAMINGM-LR 348
Query: 343 IQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN-ALVHMYSECGQIGDAFK 401
T + +L C + G+ +SL++ P + ++YS G +A +
Sbjct: 349 PDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEE 408
Query: 402 AFVDI----VCKDDSSWSSIIGTYKQNGMESEALELCKEML-AEGITFTSYSLPLCISSC 456
A ++ V + + W++++ + + G + + K ++ + + + Y L + I S
Sbjct: 409 ALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSV 468
Query: 457 S 457
+
Sbjct: 469 T 469
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 138/317 (43%), Gaps = 27/317 (8%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP +N+++W +IS++L A + + LF +M + NE T +LL AC A G
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEG 269
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+H L+R+ L ++L+ MY + A +F L R+ V WNVMI
Sbjct: 270 RSVHASLIRTFLNSSVVIDTALIDMY-GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCL 328
Query: 121 VGDFCMVQRLFSEMWEVEG-LKPDNRTFVSLLKCCSTLGEVMQIHG----LASKFGAETD 175
G LF M + G L+PD TFV +L C+ G V Q + +F + +
Sbjct: 329 HGRPEGGLELFEAM--INGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD----NFVWSSIISG--YTVNNRGEEAVHF 229
M +LY+ G + ++ ++D + W++++S +T N E++
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESI-- 444
Query: 230 FKDMCKQRVKPDQ------HVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL 283
K ++ D H+L + ED+N V+ + K G C + +
Sbjct: 445 ----AKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNR-VREMVKERKIGRIPGCGLVDLK 499
Query: 284 LTLYANFGGLRDAEKLF 300
++ G ++AEK+F
Sbjct: 500 EIVHGLRLGCKEAEKVF 516
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 181/337 (53%), Gaps = 16/337 (4%)
Query: 360 DLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSII 418
DL + R+ M + +P +V N+L+ G++ AF+ F + D SW+++I
Sbjct: 136 DLESSRK-----MFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVI 190
Query: 419 GTYKQNGMESEALELCKEMLAEG---ITFTSYSLPLCISSCSQL--LAINVGKQFHVFAI 473
+ + G+ ++AL + EM+ IT + +SSC+ I +GKQ H + +
Sbjct: 191 NGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVM 250
Query: 474 KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEV-IYNAMICGYAHHGQAKQAI 532
+G++++DMY K G +E + +FD Q++ +V +NA+I A +G+ KQA+
Sbjct: 251 SKEIILTTTLGTALLDMYGKAGDLEMALTIFD-QIRDKKVCAWNAIISALASNGRPKQAL 309
Query: 533 EIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA 592
E+F M++ + V PN +T LA+L+AC+ + ++ + LF+ + +YKI P SEHY C+VD
Sbjct: 310 EMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDL 369
Query: 593 YGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASY 649
GRAG L +A +Q + S LL AC+ H NT++G K++I L P Y
Sbjct: 370 IGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQY 429
Query: 650 ILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSSWL 686
+ LS + W EA R+ M + G++K P S L
Sbjct: 430 VALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 41/295 (13%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
+ TLI S+L G + LF M +PN TF L++A + + G+ +HG +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 69 RSGLERDKFAGSSLVYMYSNNG--------------------SNLRDACC---------- 98
+ G D F +S V Y G ++L DAC
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEG--LKPDNRTFVSLLKCCST 156
F + D+V+W +I+GF++ G +F EM + E + P+ TFVS+L C+
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 157 -------LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
LG+ QIHG + +A++D+Y K GD+ IFD + +K
Sbjct: 234 FDQGGIRLGK--QIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
W++IIS N R ++A+ F+ M V P+ L + L AC + ++ G+Q+
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 46/311 (14%)
Query: 111 WNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC-CSTLGEV--MQIHGLA 167
+N +I + G++ LF+ M ++P+N TF SL+K CS+ + +HG A
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHML-ASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 168 SKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDS-------------------------- 201
K G D V ++ V Y + GD+ S RK+FD
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 202 -----MEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR---VKPDQHVLSSTLRACV 253
M D W+++I+G++ +A+ F +M + + P++ S L +C
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 254 EIED--LNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAW 311
+ + G Q+HG ++ + + LL +Y G L A +F +I DK + AW
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 312 NSMILAHAQLGQGSSRSMQLLQ--ELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHS 369
N++I A A G R Q L+ E+ +++ + G TL+AIL +C + G Q+ S
Sbjct: 293 NAIISALASNG----RPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 370 LVMKSSVSHPT 380
+ PT
Sbjct: 349 SICSEYKIIPT 359
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 205 KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
K V++++I Y + ++ F M V+P+ S ++A ++ GV +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 265 HGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF------------------------ 300
HGQ +K G D FV + + Y G L + K+F
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 301 -------RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG--ATLIAI 351
+R+ D+V+W ++I ++ G ++++ + E+ + I AT +++
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGL-HAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 352 LKSCKN--KSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK 409
L SC N + + G+QIH VM + T +G AL+ MY + G + A F I K
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 410 DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF 468
+W++II NG +ALE+ + M + + +L +++C++ +++G Q
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 120/276 (43%), Gaps = 43/276 (15%)
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF 468
K ++++I +Y G +L L MLA + + + P I + +++ G
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 469 HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQA 528
H A+K G+ D +V +S + Y + G +E S+K+FD + P V N+++ +G+
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 529 KQAIEIFTML----------------------------------EKNGVTPNQVTFLAML 554
A E F + E+ +TPN+ TF+++L
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 555 SACSH--AGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ--KDG 610
S+C++ G I + ++ K +I + + L+D YG+AG LE A I +D
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSK-EIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 611 SESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDH 646
AW ++SA ++ K A +M E+ S +
Sbjct: 288 KVCAWNAIISALASNGR----PKQALEMFEMMKSSY 319
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 138/319 (43%), Gaps = 50/319 (15%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER----PNEYTFSVLLRACAT--P 54
MP +VV+WTT+I+ + G KA +F +M + +ER PNE TF +L +CA
Sbjct: 178 MPVTDVVSWTTVINGFSKKGLHAKALMVFGEM-IQNERAVITPNEATFVSVLSSCANFDQ 236
Query: 55 ALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVM 114
+G QIHG ++ + G++L+ MY G +L A +F + ++ + AWN +
Sbjct: 237 GGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAG-DLEMALTIFDQIRDKKVCAWNAI 295
Query: 115 ISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAET 174
IS A G +F EM + + P+ T +++L C+
Sbjct: 296 ISALASNGRPKQALEMF-EMMKSSYVHPNGITLLAILTACA------------------- 335
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGE-----EAVHF 229
S +VDL ++F S+ + + +S G V+ G +A +F
Sbjct: 336 ----RSKLVDLGI---------QLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANF 382
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
+ + +PD VL + L AC E+ G V Q+I Q+ C L T A
Sbjct: 383 IQSL---PFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQH-CGQYVALSTFNAL 438
Query: 290 FGGLRDAEKLFRRIDDKDI 308
+AEK+ + + + I
Sbjct: 439 DSNWSEAEKMRKAMIEAGI 457
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 212/450 (47%), Gaps = 54/450 (12%)
Query: 249 LRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDI 308
LR C L Q+H ++IK+ ND + L+++ ++FG + A +F ++
Sbjct: 27 LRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 309 VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIH 368
WN MI + + + ++ L + + Q T ++K+C S + G Q+H
Sbjct: 84 FTWNLMIRSLS-VNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 369 SLVMKSSVSHPTLVGNALVHMYSECG-------------------------------QIG 397
L +K+ + N L+ +Y +CG Q+
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 398 DAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCS 457
A F + ++ SW+++I Y +N EA +L + M + + +++ + + +
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 458 QLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNA 517
QL ++++G+ H +A K+G+ D ++G+++IDMY+KCG ++D++KVFD + +N+
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 518 MICGYAHHGQAKQAIEIFTMLEKNG-VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
MI HG ++A+ +F +E+ V P+ +TF+ +LSAC++ G ++D L FT M+
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQV 382
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWRTLLSACRNHNNTKIGEKSAK 636
Y I P EH +C++ +A +E+A +V+ S+ + N+ G +
Sbjct: 383 YGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDF-----------NSSFGNEYTD 431
Query: 637 KMIELNPSDHASYILLSNIYIEEGKWEEAR 666
M E N + I+ + KW+ R
Sbjct: 432 GMNETNETPSQHQIMFT-------KWDTGR 454
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 158/354 (44%), Gaps = 39/354 (11%)
Query: 45 SVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLL 104
S LR C+ + QIH +++ L D+ L+ + S+ G + A VF+ L
Sbjct: 24 SYFLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGET-QYASLVFNQLQ 79
Query: 105 ERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVM 161
WN+MI + LF M + D TF ++K C S++
Sbjct: 80 SPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGT 139
Query: 162 QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD--------------- 206
Q+HGLA K G D + ++DLY KCG S RK+FD M +
Sbjct: 140 QVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNS 199
Query: 207 ---------------NFV-WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLR 250
N V W+++I+ Y N R +EA F+ M VKP++ + + L+
Sbjct: 200 QLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQ 259
Query: 251 ACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA 310
A ++ L+ G VH KNG DCF+ + L+ +Y+ G L+DA K+F + K +
Sbjct: 260 ASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLAT 319
Query: 311 WNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG 364
WNSMI + G G ++ L +E+ S++ T + +L +C N ++ G
Sbjct: 320 WNSMITSLGVHGCG-EEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 38/299 (12%)
Query: 8 TWTTLISSHLRAGSVPK-AFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNVGLQIHG 65
TW +I S L P+ A LF M + + + +++TF +++AC + +G Q+HG
Sbjct: 85 TWNLMIRS-LSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNG------------------------------SNLRD 95
+ +++G D F ++L+ +Y G S L
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 96 ACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS 155
A VF+ + R++V+W MI+ + + +LF M +V+ +KP+ T V+LL+ +
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRM-QVDDVKPNEFTIVNLLQAST 262
Query: 156 TLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSS 212
LG + +H A K G D + +A++D+Y+KCG + RK+FD M+ K W+S
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 213 IISGYTVNNRGEEAVHFFKDMCKQ-RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
+I+ V+ GEEA+ F++M ++ V+PD L AC ++ G++ +MI+
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 17/218 (7%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP RNVV+WT +I+++++ +AFQLF M+V D +PNE+T LL+A ++G
Sbjct: 211 MPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQ 120
+H ++G D F G++L+ MYS GS L+DA VF + + L WN MI+
Sbjct: 271 RWVHDYAHKNGFVLDCFLGTALIDMYSKCGS-LQDARKVFDVMQGKSLATWNSMITSLGV 329
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV----------MQIHGLASKF 170
G LF EM E ++PD TFV +L C+ G V +Q++G++
Sbjct: 330 HGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPI- 388
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNF 208
E +A M+ L + +V + +SM+ +F
Sbjct: 389 -REHNA----CMIQLLEQALEVEKASNLVESMDSDPDF 421
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 157/280 (56%), Gaps = 8/280 (2%)
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLA-EGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
SW++II Y + EA+ L M+A + I ++ + + L + + H +
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 472 AIKSGYNH-DVYVGSSIIDMYAKCGHMEDSKKVFD--AQVKPNEVIYNAMICGYAHHGQA 528
K G+ D+ V +S+ID YAKCG ++ + K F + N V + MI +A HG
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMG 341
Query: 529 KQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDT-LNLFTLMLYKYKIKPESEHYS 587
K+A+ +F +E+ G+ PN+VT +++L+ACSH G E+ L F M+ +YKI P+ +HY
Sbjct: 342 KEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYG 401
Query: 588 CLVDAYGRAGRLEEAYQIVQKDGSES---AWRTLLSACRNHNNTKIGEKSAKKMIELNPS 644
CLVD R GRLEEA +I + E WR LL AC +++ ++ E+ +K++EL S
Sbjct: 402 CLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERS 461
Query: 645 DHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKDPGSS 684
Y+L+SNI+ G++ +A+ R++M GV K PG S
Sbjct: 462 HGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 163/350 (46%), Gaps = 60/350 (17%)
Query: 40 NEYTFSVLLRACATPALWNVGLQIHGVLV--RSGLERDKFAGSSLVYMYSNNGSNLRDAC 97
+ +T+ LL+A + P ++ L I + + G E + ++LV MY G N+ DA
Sbjct: 120 DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGG-NMIDAH 178
Query: 98 CVFHDLLERDLVAWNVMISGFAQVGDF----CMVQR------------------------ 129
VF ++ ER+ V WNVMI+G +GDF C +++
Sbjct: 179 KVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKE 238
Query: 130 ---LFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM---QIHGLASKFG-AETDAVVSSAM 182
LFS M + +KP+ T +++L LG++ +H K G D V++++
Sbjct: 239 AILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSL 298
Query: 183 VDLYAKCGDVSSCRKIFDSMEE-KDNFV-WSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
+D YAKCG + S K F + + N V W+++IS + ++ G+EAV FKDM + +KP
Sbjct: 299 IDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKP 358
Query: 241 DQHVLSSTLRACVE--------IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGG 292
++ + S L AC +E NT V + ++ + C L+ + G
Sbjct: 359 NRVTMISVLNACSHGGLAEEEFLEFFNTMVNEY-KITPDVKHYGC-----LVDMLRRKGR 412
Query: 293 LRDAEKLFRRID-DKDIVAWNSMILA-----HAQLGQGSSRSMQLLQELH 336
L +AEK+ I ++ V W ++ A A+L + +R + L+ H
Sbjct: 413 LEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSH 462
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDE-RPNEYTFSVLLRACATPALWNV 59
MP+R VV+WTT+I + R +A LF+ M D +PNE T +L PA+WN+
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAIL-----PAVWNL 269
Query: 60 G-----LQIHGVLVRSGLER-DKFAGSSLVYMYSNNGSNLRDACCVFHDLL--ERDLVAW 111
G +H + + G D +SL+ Y+ G ++ A F ++ ++LV+W
Sbjct: 270 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGC-IQSAFKFFIEIPNGRKNLVSW 328
Query: 112 NVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG----EVMQ-IHGL 166
MIS FA G +F +M E GLKP+ T +S+L CS G E ++ + +
Sbjct: 329 TTMISAFAIHGMGKEAVSMFKDM-ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Query: 167 ASKFGAETDAVVSSAMVDLYAKCGDVSSCRKI-FDSMEEKDNFVWSSIISGYTVNNRGEE 225
+++ D +VD+ + G + KI + E+ VW ++ +V + E
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAEL 447
Query: 226 A 226
A
Sbjct: 448 A 448
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 43/261 (16%)
Query: 138 EGLKP-DNRTFVSLLKCCS-----TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGD 191
+ L P D+ T++ LLK S +L + +HGL K G E+ V +A+V +Y G+
Sbjct: 114 KSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGN 173
Query: 192 VSSCRKIFDSMEEKDNFV-------------------------------WSSIISGYTVN 220
+ K+FD M E++ W++II GY
Sbjct: 174 MIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARV 233
Query: 221 NRGEEAVHFFKDMCK-QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQN-DCF 278
++ +EA+ F M +KP++ + + L A + DL VH + K G D
Sbjct: 234 DKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIR 293
Query: 279 VASVLLTLYANFGGLRDAEKLFRRIDD--KDIVAWNSMILAHAQLGQGSSRSMQLLQELH 336
V + L+ YA G ++ A K F I + K++V+W +MI A A G G ++ + +++
Sbjct: 294 VTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKE-AVSMFKDME 352
Query: 337 RTTSLQIQGATLIAILKSCKN 357
R L+ T+I++L +C +
Sbjct: 353 R-LGLKPNRVTMISVLNACSH 372
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 474 KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMIC------------- 520
K G+ VYV ++++ MY G+M D+ KVFD + N V +N MI
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 521 ------------------GYAHHGQAKQAIEIFT-MLEKNGVTPNQVTFLAMLSACSHAG 561
GYA + K+AI +F+ M+ + + PN++T LA+L A + G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 562 YIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQ--IVQKDGSES--AWRT 617
++ ++ + + + + + L+DAY + G ++ A++ I +G ++ +W T
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 618 LLSACRNHNNTKIGEKSAKKMIEL 641
++SA H K K M L
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERL 354
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 135/581 (23%), Positives = 258/581 (44%), Gaps = 84/581 (14%)
Query: 44 FSVLLRACATPALWNVGL-QIHG-VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFH 101
+V L A A+ AL L QIH ++V + L R + S ++ + + +F
Sbjct: 5 LTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFD 64
Query: 102 DLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVM 161
+ ++ N M F+++ V RL+ + G+ PD +F ++K G +
Sbjct: 65 SVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRC-GIMPDAFSFPVVIKSAGRFGILF 123
Query: 162 QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNN 221
Q L K G D V + ++D+Y K V S RK+FD + ++ W+ +ISGY
Sbjct: 124 Q--ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWG 181
Query: 222 RGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVAS 281
EEA F M P+ V+S T
Sbjct: 182 NKEEACKLFDMM------PENDVVSWT--------------------------------- 202
Query: 282 VLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSL 341
V++T +A L +A K F R+ +K +V+WN+M+ +AQ G + +++L ++ R +
Sbjct: 203 VMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNG-FTEDALRLFNDMLRL-GV 260
Query: 342 QIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFK 401
+ T + ++ +C ++D R + L+ + V V AL+ M+++C I A +
Sbjct: 261 RPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARR 320
Query: 402 AF-------------------------------VDIVCKDDS-SWSSIIGTYKQNGMESE 429
F D + K + SW+S+I Y NG +
Sbjct: 321 IFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAAL 380
Query: 430 ALELCKEMLAEGITFTS-YSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSII 488
A+E ++M+ G + ++ +S+C + + +G + K+ + S+I
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLI 440
Query: 489 DMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQV 548
MYA+ G++ ++K+VFD + + V YN + +A +G + + + + ++ G+ P++V
Sbjct: 441 FMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 549 TFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCL 589
T+ ++L+AC+ AG +++ +F K P ++HY+C+
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIF-----KSIRNPLADHYACM 536
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 146/299 (48%), Gaps = 36/299 (12%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP ++VV+W ++S + + G A +LFNDM + RPNE T+ +++ AC+ A ++
Sbjct: 224 MPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT 283
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL-LERDLVAWNVMISGFA 119
+ ++ + + F ++L+ M++ +++ A +F++L +R+LV WN MISG+
Sbjct: 284 RSLVKLIDEKRVRLNCFVKTALLDMHA-KCRDIQSARRIFNELGTQRNLVTWNAMISGYT 342
Query: 120 QVGDFCMVQRLFSEM-------WE--VEGL----------------------KPDNRTFV 148
++GD ++LF M W + G KPD T +
Sbjct: 343 RIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMI 402
Query: 149 SLLKCCSTLGEVMQ---IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
S+L C + ++ I K + + +++ +YA+ G++ +++FD M+E+
Sbjct: 403 SVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER 462
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQV 264
D ++++ + + N G E ++ M + ++PD+ +S L AC L G ++
Sbjct: 463 DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 144/664 (21%), Positives = 290/664 (43%), Gaps = 76/664 (11%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+VVT+T L+ + +AG+ +AF + MR PN +T++ L+ + L++
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFAQ 120
G + G++ + + Y +G ++ A F + + ++VA N + A+
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSV-SALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAV 177
G +++F + ++ GL PD+ T+ ++KC S +GE+ + L S+ G E D +
Sbjct: 481 AGRDREAKQIFYGLKDI-GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEE---KDNFV-WSSIISGYTVNNRGEEAVHFFKDM 233
V +++++ K V K+F M+E K V ++++++G N + +EA+ F+ M
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQM-------------------IKNGHQ 274
++ P+ ++ + +++ +++ +M +KNG
Sbjct: 600 VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 275 ND--CFVASVLLTLYANFGGL-------------RDAEK-----LFRRIDDKDIVAWNSM 314
+ CF + +Y +F L DA K L+ D + W +
Sbjct: 660 KEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 315 I---LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK-SCKNKSDLPAGRQIHSL 370
I LA A + S S +L+ + + L+ I++ SCK+ +++ R +
Sbjct: 720 IGSILAEAGIDNAVSFSERLVA----NGICRDGDSILVPIIRYSCKH-NNVSGARTLFEK 774
Query: 371 VMKSSVSHPTL-VGNALVHMYSECGQIGDAFKAFVDI----VCKDDSSWSSIIGTYKQNG 425
K P L N L+ E I A F+ + D ++++ ++ Y ++G
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 426 MESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF---AIKSGYNHDVY 482
E EL KEM + + + IS + A NV ++ ++
Sbjct: 835 KIDELFELYKEMSTHECEANTITHNIVISGLVK--AGNVDDALDLYYDLMSDRDFSPTAC 892
Query: 483 VGSSIIDMYAKCGHMEDSKKVFDAQV----KPNEVIYNAMICGYAHHGQAKQAIEIFTML 538
+ID +K G + ++K++F+ + +PN IYN +I G+ G+A A +F +
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 539 EKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGR 598
K GV P+ T+ ++ G +++ L+ F L + + P+ Y+ +++ G++ R
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK-ELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 599 LEEA 602
LEEA
Sbjct: 1012 LEEA 1015
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 130/671 (19%), Positives = 274/671 (40%), Gaps = 80/671 (11%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
NV T+T I RAG + +A+++ M P+ T++VL+ A T + ++
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER-----DLVAWNVMISGFA 119
+ + D+ +L+ +S+N D+ F +E+ D+V + +++
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRD--LDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSL---LKCCSTLGEVMQIHGLASKFGAETDA 176
+ G+F M + +G+ P+ T+ +L L L + +++ G G + A
Sbjct: 375 KAGNFGEAFDTLDVMRD-QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSII----SGYTVNN--RGEEAVHFF 230
+D Y K GD S + F+ M+ K + +I+ S Y++ R EA F
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKG--IAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
+ + PD + ++ ++ +++ +++ +M++NG + D V + L+
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 291 GGLRDAEKLFRRIDD----KDIVAWNSMILAHAQLGQGSSRSMQLLQELHR--------- 337
+ +A K+F R+ + +V +N+++ + G+ +++L + + +
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK-IQEAIELFEGMVQKGCPPNTIT 610
Query: 338 --------------TTSLQI---------------QGATLIAILKSCKNKSDLPAGRQIH 368
T +L++ + ++K+ + K + Q+
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Query: 369 SLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV--CKDDSS---WSSIIGTYKQ 423
LV V+ TL+ + + I DA+K + + C D + W +IG+
Sbjct: 671 KLVYPDFVTLCTLLPGVV-----KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILA 725
Query: 424 NGMESEALELCKEMLAEGITFTSYSL--PLCISSCSQLLAINVGKQFHVFAIKSGYNHDV 481
A+ + ++A GI S+ P+ SC F F G +
Sbjct: 726 EAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKL 785
Query: 482 YVGSSIIDMYAKCGHMEDSKKVFDAQVK-----PNEVIYNAMICGYAHHGQAKQAIEIFT 536
+ +I + +E ++ VF QVK P+ YN ++ Y G+ + E++
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVF-LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 537 MLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRA 596
+ + N +T ++S AG ++D L+L+ ++ P + Y L+D ++
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 597 GRLEEAYQIVQ 607
GRL EA Q+ +
Sbjct: 905 GRLYEAKQLFE 915
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 139/703 (19%), Positives = 276/703 (39%), Gaps = 138/703 (19%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N+ T+ TLI LR + A +LF +M + +P YT+ V + L+
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFAQ 120
+ G+ + A ++ +Y + G + R+A +F+ L L D V +N+M+ +++
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRD-REAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 121 VGDFCMVQRLFSEM----------------------------WEV------EGLKPDNRT 146
VG+ +L SEM W++ LKP T
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 147 FVSLLKCCSTLGEVMQ----IHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSM 202
+ +LL G++ + G+ K G + + + + D K +V+ K+ M
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 203 EE----KDNFVWSSIISGYTVNNRGEEAVHF-----------FKDMC-------KQRVKP 240
+ D F +++II G N + +EA+ F F +C K +
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIE 694
Query: 241 DQH-VLSSTLRACVEI------EDL----------NTGVQVHGQMIKNG--HQNDCFVAS 281
D + ++++ L C + EDL + V +++ NG D +
Sbjct: 695 DAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754
Query: 282 VLL------------TLYANF-----------------GGLRDA------EKLFRRIDD- 305
++ TL+ F GGL +A + +F ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 306 ---KDIVAWNSMILAHAQLGQGSSRSMQLLQEL--HRTTSLQIQGATLIAILKSCKNKSD 360
D+ +N ++ A+ + G+ +L +E+ H + I +I+ L N D
Sbjct: 815 GCIPDVATYNFLLDAYGKSGK-IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 361 LPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDA---FKAFVDIVCKDDSS-WSS 416
A + L+ S L+ S+ G++ +A F+ +D C+ + + ++
Sbjct: 874 --ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 417 IIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSG 476
+I + + G A L K M+ EG+ + + + + ++ G + +SG
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 477 YNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ-----VKPNEVIYNAMICGYAHHGQAKQA 531
N DV + II+ K +E++ +F+ + P+ YN++I G ++A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLML 574
+I+ +++ G+ PN TF A++ S +G E ++ M+
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 121/642 (18%), Positives = 247/642 (38%), Gaps = 114/642 (17%)
Query: 108 LVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLA 167
L ++ ++ G + D V L EM E GLKP+ TF ++ G++ + + +
Sbjct: 223 LQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 168 SKF---GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVN 220
+ G D V + ++D + +++F+ M+ + D + +++ ++ N
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341
Query: 221 NRGEEAVHFFKDM-------------------CK----------------QRVKPDQHVL 245
+ F+ +M CK Q + P+ H
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 246 SSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD 305
++ + + + L+ +++ G M G + + V + Y G A + F ++
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 306 K----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDL 361
K +IVA N+ + + A+ G+ + Q+ L + L T ++K ++
Sbjct: 462 KGIAPNIVACNASLYSLAKAGR-DREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 362 PAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI----VCKDDSSWSSI 417
++ S +M++ +V N+L++ + ++ +A+K F+ + + +++++
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 418 IGTYKQNGMESEALELCKEMLAEG-----ITFTSYSLPLCISSCSQLLAINVGKQFHVFA 472
+ +NG EA+EL + M+ +G ITF + LC
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC-------------------- 619
Query: 473 IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAI 532
N +V + ++ K+ D P+ YN +I G +GQ K+A+
Sbjct: 620 ----KNDEVTLALKML------------FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 533 EIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA 592
F ++K V P+ VT +L A IED + T LY +P + + L+ +
Sbjct: 664 CFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722
Query: 593 YGRAGRLEEAYQIVQ--------KDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPS 644
++ A + +DG + +C+ HNN A+ + E
Sbjct: 723 ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCK-HNNV----SGARTLFEKFTK 777
Query: 645 DHA------SYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
D +Y LL +E E A+D ++ TG D
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/580 (18%), Positives = 220/580 (37%), Gaps = 82/580 (14%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
VVT+ TL++ + G + +A +LF M PN TF+ L + L++
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHD---LLERDLVAWNVMISGFAQVG 122
++ G D F +++++ NG +++A C FH L+ D V ++ G +
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNG-QVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAS 691
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGL-----------ASKFG 171
++ + +P N + L+ G ++ G+ A+
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLI------GSILAEAGIDNAVSFSERLVANGIC 745
Query: 172 AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFK 231
+ D+++ ++ K +VS R +F+ F K
Sbjct: 746 RDGDSILV-PIIRYSCKHNNVSGARTLFEK---------------------------FTK 777
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFG 291
D+ Q P ++L L +E + + V Q+ G D + LL Y G
Sbjct: 778 DLGVQPKLPTYNLLIGGL---LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 292 GLRDAEKLFRRID----DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGAT 347
+ + +L++ + + + + N +I + G ++ L +L T
Sbjct: 835 KIDELFELYKEMSTHECEANTITHNIVISGLVKAGN-VDDALDLYYDLMSDRDFSPTACT 893
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDA---FKAFV 404
++ L +Q+ ++ + N L++ + + G+ A FK V
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 405 -DIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
+ V D ++S ++ G E L KE+ G+ P + C L+
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN------PDVV--CYNLIING 1005
Query: 464 VGKQ---------FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD----AQVKP 510
+GK F+ G D+Y +S+I G +E++ K+++ A ++P
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 511 NEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTF 550
N +NA+I GY+ G+ + A ++ + G +PN T+
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/524 (22%), Positives = 217/524 (41%), Gaps = 58/524 (11%)
Query: 112 NVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF- 170
N++++ + +F F + +G+ PD F + + G+V + L SK
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 171 --GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN----FVWSSIISGYTVNNRGE 224
G + V + ++D CG + M E+ +S ++ G T R
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 225 EAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL 284
+A K+M K+ P+ V ++ + + +E LN +++ M+ G + L+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 285 TLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM--QLLQELHRTTSLQ 342
Y G +AE+L + M+ + QGS S+ L L ++L+
Sbjct: 408 KGYCKNGQADNAERLLK-----------EMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 343 IQGATLIAILKSCKNKSDLPAGRQIHSLV-------------------MKSSVSHPTLVG 383
G L+ +N S P G + +L+ + T
Sbjct: 457 FVGEMLL------RNMS--PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLA 439
NAL+H E G++ +AF+ +I+ + D S++++I EA EM+
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 440 EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMED 499
G+ +Y+ + I + + QF ++G DVY S +ID K E+
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 500 SKKVFD----AQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLS 555
++ FD V+PN V+YN +I Y G+ A+E+ ++ G++PN T+ +++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 556 ACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRL 599
S +E+ LF M + ++P HY+ L+D YG+ G++
Sbjct: 689 GMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQM 731
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/472 (20%), Positives = 190/472 (40%), Gaps = 66/472 (13%)
Query: 152 KCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDN 207
KCC V + G D + + ++ + K G V K+F MEE +
Sbjct: 244 KCCEAFDVVCK--------GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNV 295
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
++++I G + R +EA F + M ++ ++P S ++ + + V +
Sbjct: 296 VTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE 355
Query: 268 MIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIV----------AWNSMILA 317
M K G + V + L+ + G L A I+ KD++ +N++I
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKA------IEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 318 HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
+ + GQ + + +LL+E+ QG+ I C + A R + +++++
Sbjct: 410 YCKNGQADN-AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 468
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALEL 433
L+ L+ + G+ A + + + K D + ++++ + G EA +
Sbjct: 469 GGGLL-TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
KE+L G S IS C ++ F +K G
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG----------------- 570
Query: 494 CGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAM 553
+KP+ Y+ +ICG + + ++AI+ + ++NG+ P+ T+ M
Sbjct: 571 --------------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 554 LSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI 605
+ C A E+ F M+ K ++P + Y+ L+ AY R+GRL A ++
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 110/580 (18%), Positives = 222/580 (38%), Gaps = 84/580 (14%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V +TT I++ + G V +A +LF+ M PN TF+ ++ ++
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQ 120
+V G+E S LV + + DA V ++ ++ +++ +N +I F +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTR-AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G +L + ++I L G + +
Sbjct: 378 AG---------------------------------SLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFV----WSSIISGYTVNNRGEEAVHFFKDMCKQ 236
++ Y K G + ++ M V ++S+I + + A+ F +M +
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+ P +L++ + + + +++ Q + G D ++ LL G L +A
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 297 EKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHR-------TTSLQIQG 345
++ + I + D V++N++I + M L + + R T S+ I G
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 346 -------ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
I CK LP ++ ++ +E GQ
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLP-----------DVYTYSVMIDGCCKAERTEEGQ--- 630
Query: 399 AFKAFVDIVCKDDSS----WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCIS 454
+ F +++ K+ ++ +I Y ++G S ALEL ++M +GI+ S + I
Sbjct: 631 --EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 455 SCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS----KKVFDAQVKP 510
S + + K G +V+ +++ID Y K G M +++ V P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 511 NEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTF 550
N++ Y MI GYA G +A + + + G+ P+ +T+
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/524 (22%), Positives = 217/524 (41%), Gaps = 58/524 (11%)
Query: 112 NVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF- 170
N++++ + +F F + +G+ PD F + + G+V + L SK
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 171 --GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN----FVWSSIISGYTVNNRGE 224
G + V + ++D CG + M E+ +S ++ G T R
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 225 EAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL 284
+A K+M K+ P+ V ++ + + +E LN +++ M+ G + L+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 285 TLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM--QLLQELHRTTSLQ 342
Y G +AE+L + M+ + QGS S+ L L ++L+
Sbjct: 408 KGYCKNGQADNAERLLK-----------EMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 343 IQGATLIAILKSCKNKSDLPAGRQIHSLV-------------------MKSSVSHPTLVG 383
G L+ +N S P G + +L+ + T
Sbjct: 457 FVGEMLL------RNMS--PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 384 NALVHMYSECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLA 439
NAL+H E G++ +AF+ +I+ + D S++++I EA EM+
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 440 EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMED 499
G+ +Y+ + I + + QF ++G DVY S +ID K E+
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 500 SKKVFD----AQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLS 555
++ FD V+PN V+YN +I Y G+ A+E+ ++ G++PN T+ +++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 556 ACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRL 599
S +E+ LF M + ++P HY+ L+D YG+ G++
Sbjct: 689 GMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQM 731
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/472 (20%), Positives = 190/472 (40%), Gaps = 66/472 (13%)
Query: 152 KCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDN 207
KCC V + G D + + ++ + K G V K+F MEE +
Sbjct: 244 KCCEAFDVVCK--------GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNV 295
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
++++I G + R +EA F + M ++ ++P S ++ + + V +
Sbjct: 296 VTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE 355
Query: 268 MIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIV----------AWNSMILA 317
M K G + V + L+ + G L A I+ KD++ +N++I
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKA------IEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 318 HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
+ + GQ + + +LL+E+ QG+ I C + A R + +++++
Sbjct: 410 YCKNGQADN-AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 468
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALEL 433
L+ L+ + G+ A + + + K D + ++++ + G EA +
Sbjct: 469 GGGLL-TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
KE+L G S IS C ++ F +K G
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG----------------- 570
Query: 494 CGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAM 553
+KP+ Y+ +ICG + + ++AI+ + ++NG+ P+ T+ M
Sbjct: 571 --------------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 554 LSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI 605
+ C A E+ F M+ K ++P + Y+ L+ AY R+GRL A ++
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 110/580 (18%), Positives = 222/580 (38%), Gaps = 84/580 (14%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V +TT I++ + G V +A +LF+ M PN TF+ ++ ++
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQ 120
+V G+E S LV + + DA V ++ ++ +++ +N +I F +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTR-AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G +L + ++I L G + +
Sbjct: 378 AG---------------------------------SLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFV----WSSIISGYTVNNRGEEAVHFFKDMCKQ 236
++ Y K G + ++ M V ++S+I + + A+ F +M +
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+ P +L++ + + + +++ Q + G D ++ LL G L +A
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 297 EKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHR-------TTSLQIQG 345
++ + I + D V++N++I + M L + + R T S+ I G
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 346 -------ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
I CK LP ++ ++ +E GQ
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLP-----------DVYTYSVMIDGCCKAERTEEGQ--- 630
Query: 399 AFKAFVDIVCKDDSS----WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCIS 454
+ F +++ K+ ++ +I Y ++G S ALEL ++M +GI+ S + I
Sbjct: 631 --EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 455 SCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS----KKVFDAQVKP 510
S + + K G +V+ +++ID Y K G M +++ V P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 511 NEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTF 550
N++ Y MI GYA G +A + + + G+ P+ +T+
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 134/611 (21%), Positives = 256/611 (41%), Gaps = 69/611 (11%)
Query: 100 FHDL-LERD----LVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
FH L +ER +V+ N ++ G + V + RL S + + G P+ TF +L+
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDC-GPAPNVVTFCTLINGF 296
Query: 155 STLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DN 207
GE+ + + + G E D + S ++D Y K G + K+F K D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
V+SS I Y + A +K M Q + P+ + ++ + + ++GQ
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 268 MIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSR 327
++K G + S L+ + G LR L+ +D + + ++ + L G S+
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY---EDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 328 SMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALV 387
QG L A+ S K ++ S+ +V N+L+
Sbjct: 474 ----------------QGLMLHAMRFSVK--------------MLGQSIRLNVVVFNSLI 503
Query: 388 HMYSECGQIGDAFKAF----VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT 443
+ + +A K F + + D +++++++ G EAL L M G+
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 444 FTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
+ + I + + + +G Q ++ + D+ V + +I + KC +ED+ K
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 504 F----DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSH 559
F + +++P+ V YN MICGY + +A IF +L+ PN VT ++
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 560 AGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWRTLL 619
++ + +F++M K KP + Y CL+D + ++ +E ++++ ++ + +++
Sbjct: 684 NNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742
Query: 620 SAC----------RNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCR 669
S R T I ++ +L P D +Y +L Y + G+ EA
Sbjct: 743 SYSIIIDGLCKRGRVDEATNIFHQAIDA--KLLP-DVVAYAILIRGYCKVGRLVEAALLY 799
Query: 670 EKMAKTGVKKD 680
E M + GVK D
Sbjct: 800 EHMLRNGVKPD 810
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 131/575 (22%), Positives = 237/575 (41%), Gaps = 97/575 (16%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER---PNEYTFSVLLRACATPALWN 58
P NVVT+ TLI+ + G + +AF LF +VM++R P+ +S L+ +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLF---KVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLL----ERDLVAWNVM 114
+G ++ + G++ D SS + +Y +G +L A V+ +L ++V + ++
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG-DLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 115 ISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK--C-CSTLGEVMQIHGLASKFG 171
I G Q G ++ ++ + G++P T+ SL+ C C L ++ K G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 172 AETDAVVSSAMVDLYAKCG----DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAV 227
D V+ +VD +K G + K+ + V++S+I G+ NR +EA+
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 228 HFFKDMCKQRVKPDQHVLSSTLRA-----------------------------CVEIEDL 258
F+ M +KPD ++ +R C I+
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 259 ------NTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRID----DKDI 308
G+Q+ M +N D V +V++ L + DA K F + + DI
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 309 VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATL-IAILKSCKNKSDLPAGRQI 367
V +N+MI + L + + + EL + T TL I I CKN +D+ ++
Sbjct: 637 VTYNTMICGYCSLRRLD--EAERIFELLKVTPFGPNTVTLTILIHVLCKN-NDMDGAIRM 693
Query: 368 HSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGME 427
S +M S P NA+ + G + D F VDI G++K
Sbjct: 694 FS-IMAEKGSKP----NAVTY-----GCLMDWFSKSVDIE-----------GSFK----- 727
Query: 428 SEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSI 487
L +EM +GI+ + S + I + ++ AI + DV + +
Sbjct: 728 -----LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 782
Query: 488 IDMYAKCGHMEDSKKVFDAQ----VKPNEVIYNAM 518
I Y K G + ++ +++ VKP++++ A+
Sbjct: 783 IRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/606 (20%), Positives = 243/606 (40%), Gaps = 85/606 (14%)
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE----RDLVAWNVMISGFAQVG 122
L G D ++ +SL+ ++N+G R+A VF + E L+ +NV+++ F ++G
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSG-RYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMG 257
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFGAETDAVVS 179
E + +G+ PD T+ +L+ CC S E Q+ G D V
Sbjct: 258 TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY 317
Query: 180 SAMVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
+A++D+Y K K+ + M ++S+IS Y + +EA+ M +
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+ KPD ++ L + + + + +M G + + + + +Y N G +
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 296 AEKLFRRID----DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
K+F I+ DIV WN+++ Q G S S +
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS---------------------GV 476
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI----V 407
K K +P N L+ YS CG A + + V
Sbjct: 477 FKEMKRAGFVPERETF----------------NTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 408 CKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ 467
D S++++++ + GM ++ ++ EM +G P ++ CS L A GK+
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDG-----RCKPNELTYCSLLHAYANGKE 574
Query: 468 FHVFAIKSGYNHDVYVG---------SSIIDMYAKCGHMEDSKKVF----DAQVKPNEVI 514
+ +VY G +++ + +KC + ++++ F + P+
Sbjct: 575 ---IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 515 YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLML 574
N+M+ Y +A + +++ G TP+ T+ +++ S + + + +L
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 575 YKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWRTLLSACRNHNNTKIGEKS 634
K IKP+ Y+ ++ AY R R+ +A +I + + +++ NT IG +
Sbjct: 692 AK-GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITY-----NTFIGSYA 745
Query: 635 AKKMIE 640
A M E
Sbjct: 746 ADSMFE 751
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 188/473 (39%), Gaps = 55/473 (11%)
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFF 230
D V + ++ + K G VSS +F+ ++E D + ++S+IS + + R EAV+ F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 231 KDM----CKQR--------------------------------VKPDQHVLSSTLRACVE 254
K M CK + PD + ++ + C
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRID----DKDIVA 310
QV +M G D + LL +Y ++A K+ + IV
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 311 WNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSL 370
+NS+I A+A+ G +M+L ++ + + T +L + + + I
Sbjct: 352 YNSLISAYARDGM-LDEAMELKNQMAEKGT-KPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 371 VMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI-VC---KDDSSWSSIIGTYKQNGM 426
+ + NA + MY G+ + K F +I VC D +W++++ + QNGM
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 427 ESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSS 486
+SE + KEM G + IS+ S+ + + + +G D+ ++
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 487 IIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG 542
++ A+ G E S+KV D + KPNE+ Y +++ YA+ + + +
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 543 VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGR 595
+ P V ++ CS + + F+ L + P+ + +V YGR
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFS-ELKERGFSPDITTLNSMVSIYGR 641
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/455 (18%), Positives = 187/455 (41%), Gaps = 56/455 (12%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++VT+ +LIS++ R G + +A +L N M +P+ +T++ LL + I
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFAQ 120
+ +G + + ++ + MY N G + +F ++ L D+V WN +++ F Q
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRG-KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G V +F EM G P+ TF +L+
Sbjct: 467 NGMDSEVSGVFKEMKRA-GFVPERETFNTLISA--------------------------- 498
Query: 181 AMVDLYAKCGDVSSC----RKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
Y++CG R++ D+ D ++++++ E++ +M
Sbjct: 499 -----YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 553
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
R KP++ S L A +++ + ++ + + L+ + + L +A
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA 613
Query: 297 EKLFRRIDDK----DIVAWNSM--ILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
E+ F + ++ DI NSM I Q+ ++ + ++E T S+ AT +
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM----ATYNS 669
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI---- 406
++ +D +I ++ + + N +++ Y ++ DA + F ++
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 407 VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEG 441
+ D ++++ IG+Y + M EA+ + + M+ G
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 111/566 (19%), Positives = 225/566 (39%), Gaps = 91/566 (16%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+ T+ TLI+ R +A Q+F +M+ ++ T++ LL +++
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
+V +G F+ S +V +N +IS +A+ G
Sbjct: 338 NEMVLNG-----FSPS---------------------------IVTYNSLISAYARDGML 365
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAVVSSA 181
L ++M E +G KPD T+ +LL G+V M I G + + +A
Sbjct: 366 DEAMELKNQMAE-KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 182 MVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
+ +Y G + KIFD + D W+++++ + N E FK+M +
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
P++ ++ + A + V+ +M+ G D + +L A G +E
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 298 KLFRRIDD----KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
K+ ++D + + + S++ A+A G+ L +E++ + ++ + L ++
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYAN-GKEIGLMHSLAEEVY-SGVIEPRAVLLKTLVL 602
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV-----C 408
C LP + S + + S N++V +Y + A +D +
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKA-NGVLDYMKERGFT 661
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF 468
++++S++ + ++ ++ E+ +E+LA+GI P IS
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIK------PDIIS-------------- 701
Query: 469 HVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICGYAH 524
YN +Y Y + M D+ ++F ++ + P+ + YN I YA
Sbjct: 702 --------YNTVIYA-------YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
Query: 525 HGQAKQAIEIFTMLEKNGVTPNQVTF 550
++AI + + K+G PNQ T+
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTY 772
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 139/313 (44%), Gaps = 19/313 (6%)
Query: 385 ALVHMYSECGQIGDA---FKAFVDIVCKDD-SSWSSIIGTYKQNGME-SEALELCKEMLA 439
+L+ ++ G+ +A FK + CK +++ I+ + + G ++ L ++M +
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 440 EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMED 499
+GI +Y+ I+ C + Q +G+++D ++++D+Y K ++
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 500 SKKVFDAQV----KPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLS 555
+ KV + V P+ V YN++I YA G +A+E+ + + G P+ T+ +LS
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 556 ACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK------D 609
AG +E +++F M KP ++ + YG G+ E +I +
Sbjct: 393 GFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 610 GSESAWRTLLSAC-RNHNNTKI-GEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARD 667
W TLL+ +N ++++ G K P + ++ L + Y G +E+A
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFEQAMT 510
Query: 668 CREKMAKTGVKKD 680
+M GV D
Sbjct: 511 VYRRMLDAGVTPD 523
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/543 (20%), Positives = 240/543 (44%), Gaps = 27/543 (4%)
Query: 89 NGSNLRDACCVFHDLLER----DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDN 144
N L DA +F D+++ +V ++ ++S A++ F +V L +M + G+ +
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNL 116
Query: 145 RTFVSLLKC-C--STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDS 201
T+ L+ C C S L + + K G E D V +++++ + +S +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 202 MEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIED 257
M E D+F ++++I G +NR EAV M + +PD + + D
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 258 LNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNS 313
++ + + +M + + + + ++ N+ + DA LF +D+K ++V +NS
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 314 MILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMK 373
+I G+ S S L + R + + T A++ + + L +++ ++K
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNV--VTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 374 SSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD----DSSWSSIIGTYKQNGMESE 429
S+ ++L++ + ++ +A F ++ KD +++++I + + E
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 430 ALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIID 489
+EL +EM G+ + + I Q + + + G D+ S ++D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 490 MYAKCGHMEDSKKVFD----AQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTP 545
G +E + VF+ ++++P+ YN MI G G+ + ++F L GV P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 546 NQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI 605
N VT+ M+S G E+ LF M + + P+S Y+ L+ A+ R G + ++
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 606 VQK 608
+++
Sbjct: 594 IRE 596
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/493 (18%), Positives = 196/493 (39%), Gaps = 56/493 (11%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P ++V ++ L+S+ + L M+ + N YT+S+L+ + ++ L
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISG 117
+ +++ G E D +SL+ + +G+ + DA + ++E D +N +I G
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFC-HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAET 174
+ L M V+G +PD T+ ++ G++ L K E
Sbjct: 196 LFRHNRASEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFF 230
V+ + ++D +V+ +F M+ K + ++S+I R +A
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
DM ++++ P+ S+ + A V+ L +++ +MIK D F S L+ +
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 291 GGLRDAEKLFRRIDDKD----IVAWNSMILAHAQLGQGSSRSMQLLQELHR--------T 338
L +A+ +F + KD +V +N++I + + M+L +E+ + T
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK-AKRVDEGMELFREMSQRGLVGNTVT 433
Query: 339 TSLQIQG--------------------------ATLIAILKSCKNKSDLPAGRQIHSLVM 372
+ I G T +L N + + +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 373 KSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMES 428
+S + N ++ + G++ D + F + K + ++++++ + + G++
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 429 EALELCKEMLAEG 441
EA L +EM EG
Sbjct: 554 EADALFREMKEEG 566
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 160/351 (45%), Gaps = 28/351 (7%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
VV + T+I + +V A LF +M RPN T++ L+R W+ ++
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQV 121
++ + + S+L+ + G L +A ++ ++++R D+ ++ +I+G
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGK-LVEAEKLYDEMIKRSIDPDIFTYSSLING---- 370
Query: 122 GDFCMVQRL--FSEMWEVEGLK---PDNRTFVSLLK--C-CSTLGEVMQIHGLASKFGAE 173
FCM RL M+E+ K P+ T+ +L+K C + E M++ S+ G
Sbjct: 371 --FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHF 229
+ V + ++ + + + + + +F M D +S ++ G N + E A+
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
F+ + + +++PD + + + + + G + + G + + + +++ +
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 290 FGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELH 336
G +A+ LFR + ++ D +N++I AH + G ++ S +L++E+
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA-SAELIREMR 598
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
NVVT++ LI + ++ G + +A +L+++M P+ +T+S L+ + +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVA----WNVMISGFAQ 120
+++ + ++L+ + + + +F ++ +R LV + +I GF Q
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFC-KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
+ Q +F +M +G+ PD T+ LL G+V + + + E D
Sbjct: 444 ARECDNAQIVFKQMVS-DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 502
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSME---EKDNFV-WSSIISGYTVNNRGEEAVHFFKDM 233
+ M++ K G V +F S+ K N V +++++SG+ EEA F++M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 234 CKQRVKPDQHVLSSTLRA 251
++ PD ++ +RA
Sbjct: 563 KEEGPLPDSGTYNTLIRA 580
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/596 (20%), Positives = 255/596 (42%), Gaps = 60/596 (10%)
Query: 95 DACCVFHDLLER----DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSL 150
DA +F D+++ +V +N ++S A++ F +V L +M + G+ D T+
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSIF 124
Query: 151 LKC-C--STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE--- 204
+ C C S L + + K G E D V S++++ Y +S + D M E
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 205 -KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
D F ++++I G ++N+ EAV M ++ +PD + + + D++ +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHA 319
+ +M K + D + + ++ + + DA LF +D+K D+ ++S+I
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHP 379
G+ S S L + R + + T A++ + + L +++ ++K S+
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNV--VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 380 TLVGNALVHMYSECGQIGDAFKAFVDIVCKD----DSSWSSIIGTYKQNGMESEALELCK 435
++L++ + ++ +A F ++ KD ++S++I + + E +EL +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 436 EMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCG 495
EM G+ + + I Q A + VF
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQ--ARDCDNAQMVF------------------------ 456
Query: 496 HMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLS 555
K++ V PN + YN ++ G +G+ +A+ +F L+++ + P+ T+ M+
Sbjct: 457 -----KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 556 ACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DG-- 610
AG +ED LF + K + P Y+ ++ + R G EEA +++K DG
Sbjct: 512 GMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 611 -SESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEA 665
+ + TL+ A + + + K+M + AS I L + +G+ +++
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/494 (19%), Positives = 198/494 (40%), Gaps = 58/494 (11%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P ++V + L+S+ + L M+ + + YT+S+ + + ++ L
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISG 117
+ +++ G E D SSL+ Y ++ + DA + ++E D + +I G
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHS-KRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAET 174
L +M + G +PD T+ +++ G++ L K E
Sbjct: 198 LFLHNKASEAVALVDQMVQ-RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFF 230
D V+ + ++D K + +F M+ K D F +SS+IS R +A
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
DM ++++ P+ S+ + A V+ L +++ +MIK D F S L+ +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 291 GGLRDAEKLFRRIDDKD----IVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSL--QIQ 344
L +A+ +F + KD +V ++++I + + M+L +E+ + + +
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK-AKRVEEGMELFREMSQRGLVGNTVT 435
Query: 345 GATLI-------------AILKS--------------------CKNKSDLPAGRQIHSLV 371
TLI + K CKN L + +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN-GKLAKAMVVFEYL 494
Query: 372 MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS----SWSSIIGTYKQNGME 427
+S++ N ++ + G++ D ++ F ++ K S +++++I + + G +
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 428 SEALELCKEMLAEG 441
EA L K+M +G
Sbjct: 555 EEADSLLKKMKEDG 568
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 139/313 (44%), Gaps = 32/313 (10%)
Query: 391 SECGQIGDAFKAFVDIVCKDDSSWSSII-------GTYKQNGMESEALELCKEMLAEGIT 443
S+ ++ DA F D+V + SI+ K N E + L ++M GI+
Sbjct: 59 SDIIKVDDAVDLFGDMV--KSRPFPSIVEFNKLLSAVAKMNKFEL-VISLGEQMQTLGIS 115
Query: 444 FTSYSLPL---CISSCSQL-LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMED 499
Y+ + C SQL LA+ V + +K GY D+ SS+++ Y + D
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKM----MKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 500 SKKVFDAQV----KPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLS 555
+ + D V KP+ + +I G H +A +A+ + + + G P+ VT+ +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 556 ACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES-- 613
G I+ L+L M K KI+ + Y+ ++D + +++A + + ++
Sbjct: 232 GLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 614 ----AWRTLLSACRNHNNTKIGEKSAKKMIE--LNPSDHASYILLSNIYIEEGKWEEARD 667
+ +L+S N+ + MIE +NP + ++ L + +++EGK EA
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEK 349
Query: 668 CREKMAKTGVKKD 680
++M K + D
Sbjct: 350 LYDEMIKRSIDPD 362
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 13/283 (4%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
NVVT++ LI + ++ G + +A +L+++M P+ +T+S L+ + +
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVA----WNVMISGFAQ 120
+++ + S+L+ + + + +F ++ +R LV + +I GF Q
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFC-KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK-CCST--LGEVMQIHGLASKFGAETDAV 177
D Q +F +M V G+ P+ T+ LL C L + M + + E D
Sbjct: 446 ARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ M++ K G V ++F ++ K + ++++ISG+ EEA K M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQND 276
+ P+ ++ +RA + D ++ +M G D
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 123/602 (20%), Positives = 264/602 (43%), Gaps = 68/602 (11%)
Query: 93 LRDACCVFHDLLER----DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFV 148
L DA +F ++++ +V +N ++S A++ F +V L M + + D ++
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSYN 119
Query: 149 SLLKC-C--STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSM--- 202
L+ C C S L + + G K G E D V S++++ Y +S + D M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 203 EEKDNFV-WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
E + N V ++++I G ++N+ EAV M + +PD + + + D++
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILA 317
+ + +M K + D + + ++ N+ + DA LF +D+K ++V +NS+I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 318 HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
G+ S S L + R + + T A++ + + L +++ ++K S+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNV--VTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD----DSSWSSIIGTYKQNGMESEALEL 433
++L++ + ++ +A F ++ KD +++++I + + E +EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
+EM G+ + + YN ++I +
Sbjct: 418 FREMSQRGLVGNTVT----------------------------YN-------TLIQGLFQ 442
Query: 494 CGHMEDSKKVFDAQV----KPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVT 549
G + ++K+F V P+ + Y+ ++ G +G+ ++A+ +F L+K+ + P+ T
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 550 FLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA---YQIV 606
+ M+ AG +ED +LF + K +KP Y+ ++ + R G EEA ++ +
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 607 QKDGS---ESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWE 663
++DG+ + TL+ A + + K+M AS I + + +G+ E
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLE 621
Query: 664 EA 665
++
Sbjct: 622 KS 623
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 157/334 (47%), Gaps = 17/334 (5%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++VT ++L++ + + +A L + M VM+ +PN TF+ L+ + + +
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFAQ 120
+V G + D F ++V G ++ A + + +E D+V + +I
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRG-DIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAV 177
+ LF+EM + +G++P+ T+ SL++C G L S + V
Sbjct: 268 YKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDM 233
SA++D + K G + K++D M ++ D F +SS+I+G+ +++R +EA H F+ M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
+ P+ ++ ++ + + + G+++ +M + G + + L+ G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 294 RDAEKLFRR-IDD---KDIVAWNSMILAHAQLGQ 323
A+K+F++ + D DI+ ++ ++ + G+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 111/555 (20%), Positives = 223/555 (40%), Gaps = 62/555 (11%)
Query: 25 AFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVY 84
A LF +M P+ F+ LL A A +++ + + + + D ++ + L+
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 85 MYSNNGSNLRDACCVFHDLL----ERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGL 140
+ S L A V ++ E D+V + +++G+ L +M+ +E
Sbjct: 124 CFCRR-SQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME-Y 181
Query: 141 KPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAVVSSAMVDLYAKCGDVSSCRK 197
+P+ TF +L+ + + L + G + D +V+ K GD+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 198 IFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACV 253
+ ME E D ++++II +A++ F +M + ++P+ +S +R
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 254 EIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF----RRIDDKDIV 309
+ ++ MI+ + S L+ + G L +AEKL+ +R D DI
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 310 AWNSMI---LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS-CKNKSDLPAGR 365
++S+I H +L + + EL + T ++K CK A R
Sbjct: 362 TYSSLINGFCMHDRLDEAKH-----MFELMISKDCFPNVVTYNTLIKGFCK------AKR 410
Query: 366 QIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNG 425
+ + +S LVGN + +++++I Q G
Sbjct: 411 VEEGMELFREMSQRGLVGNTV--------------------------TYNTLIQGLFQAG 444
Query: 426 MESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGS 485
A ++ K+M+++G+ + + + + + + KS D+Y +
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 486 SIIDMYAKCGHMEDSKKVFDA----QVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKN 541
+I+ K G +ED +F + VKPN +IY MI G+ G ++A +F ++++
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 542 GVTPNQVTFLAMLSA 556
G PN T+ ++ A
Sbjct: 565 GTLPNSGTYNTLIRA 579
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 161/352 (45%), Gaps = 28/352 (7%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+VV +TT+I + +V A LF +M RPN T++ L+R W+ ++
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQ 120
++ + + S+L+ + G L +A ++ ++++R D+ ++ +I+G
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEG-KLVEAEKLYDEMIKRSIDPDIFTYSSLING--- 369
Query: 121 VGDFCMVQRL--FSEMWEVEGLK---PDNRTFVSLLK--C-CSTLGEVMQIHGLASKFGA 172
FCM RL M+E+ K P+ T+ +L+K C + E M++ S+ G
Sbjct: 370 ---FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVH 228
+ V + ++ + GD +KIF M D +S ++ G + E+A+
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F+ + K +++PD + + + + + G + + G + + + + +++ +
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546
Query: 289 NFGGLRDAEKLFRRIDDKDIV----AWNSMILAHAQLGQGSSRSMQLLQELH 336
G +A+ LFR + + + +N++I A + G ++ S +L++E+
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA-SAELIKEMR 597
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 105/585 (17%), Positives = 227/585 (38%), Gaps = 57/585 (9%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P ++V + L+S+ + L M+ + + Y++++L+ + + L
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLL----ERDLVAWNVMISG 117
+ G +++ G E D SSL+ Y +G + +A + + + + V +N +I G
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYC-HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAET 174
L M G +PD T+ +++ G++ L K E
Sbjct: 195 LFLHNKASEAVALIDRMV-ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFF 230
D V+ + ++D +V+ +F M+ K + ++S+I R +A
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
DM ++++ P+ S+ + A V+ L +++ +MIK D F S L+ +
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 291 GGLRDAEKLFRRIDDKD----IVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA 346
L +A+ +F + KD +V +N++I + + M+L +E+ +
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK-AKRVEEGMELFREMSQRG------- 425
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFV-D 405
++ ++V++ TL+ + +C FK V D
Sbjct: 426 ------------------------LVGNTVTYNTLIQG--LFQAGDCDMAQKIFKKMVSD 459
Query: 406 IVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG 465
V D ++S ++ + G +AL + + + + Y+ + I + + G
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 466 KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICG 521
G +V + +++I + + G E++ +F + PN YN +I
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDT 566
G + E+ + G + T ++M+ H G +E +
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDAST-ISMVINMLHDGRLEKS 623
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 132/633 (20%), Positives = 261/633 (41%), Gaps = 74/633 (11%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPAL-WNVGLQI 63
+V +TT++ ++ R G KA LF M+ M P T++V+L W L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFA 119
+ GL+ D+F S+++ + G LR+A F +L E V +N ++ F
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGL-LREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAETDA 176
+ G + + EM E D+ T+ L+ G E + + +K G +A
Sbjct: 328 KAGVYTEALSVLKEMEE-NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKD 232
+ + ++D Y K G K+F SM+E + +++++S +R E + D
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGV-----QVHGQMIKNGHQNDCFVASVLLTLY 287
M P++ ++ L C N G+ +V +M G + D + L++ Y
Sbjct: 447 MKSNGCSPNRATWNTMLALCG-----NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 288 ANFGGLRDAEKLFRRIDDKD----IVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI 343
G DA K++ + + +N+++ A A+ +G RS + + ++ +
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR--KGDWRSGENVISDMKSKGFKP 559
Query: 344 QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF 403
+ +L+ + +I + + + + ++ L+ +C + + +AF
Sbjct: 560 TETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAF 619
Query: 404 VDI----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQL 459
D ++S++ + +N M + AEGI L
Sbjct: 620 TLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ---------AEGI----------------L 654
Query: 460 LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK---CGHMEDSKKVFD-AQVKPNEVIY 515
+I + G + D+ +S++DMY + C E+ K + +Q+KP+ V Y
Sbjct: 655 ESIR----------EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY 704
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY 575
N +I G+ G ++A+ + + + + G+ P T+ +S + G + ++ M
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA- 763
Query: 576 KYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
K +P + +VD Y RAG+ EA V K
Sbjct: 764 KNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 120/288 (41%), Gaps = 52/288 (18%)
Query: 384 NALVHMYSECGQIGDAFKAF------------------VDIVCKDDSSWSSIIGTYKQNG 425
++H YS G+ A F +D+ K SW I+G
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG------ 267
Query: 426 MESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGS 485
+ EM ++G+ F ++ +S+C++ + K+F GY +
Sbjct: 268 -------VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 486 SIIDMYAKCGHMEDS----KKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKN 541
+++ ++ K G ++ K++ + + V YN ++ Y G +K+A + M+ K
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380
Query: 542 GVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIK-----PESEHYSCLVDAYGRA 596
GV PN +T+ ++ A AG ++ L LF Y +K P + Y+ ++ G+
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLF------YSMKEAGCVPNTCTYNAVLSLLGKK 434
Query: 597 GRLEEAYQIV---QKDG---SESAWRTLLSACRNHNNTKIGEKSAKKM 638
R E +++ + +G + + W T+L+ C N K + ++M
Sbjct: 435 SRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 108/554 (19%), Positives = 222/554 (40%), Gaps = 60/554 (10%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
T +T++S+ R G + +A + F +++ P T++ LL+ ++ L + +
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQVGD 123
+ D + LV Y G + ++A V + ++ + + + +I + + G
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFS-KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTF---VSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
+LF M E G P+ T+ +SLL S E++++ G + +
Sbjct: 402 EDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWN 460
Query: 181 AMVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
M+ L G ++F M+ E D ++++IS Y +A + +M +
Sbjct: 461 TMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA 520
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
++ L A D +G V M G + S++L YA G
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGI 580
Query: 297 EKLFRRIDDKDIV-AW---NSMILAHAQLGQ--GSSRSMQLLQELHRTTSLQIQGATLIA 350
E++ RI + I +W +++LA+ + GS R+ L ++ + I + L
Sbjct: 581 ERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSI 640
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMY---SECGQIGDAFKAFVDIV 407
++ N D G I + + +S + N+L+ MY EC + + K
Sbjct: 641 FTRN--NMYDQAEG--ILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 408 CKDD-SSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK 466
K D S++++I + + G+ EA+ + EM GI CI
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIR-------PCI------------- 736
Query: 467 QFHVFAIKSGYNHDVYV-GSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHH 525
+ ++ +V G + + M+A+ + + D +PNE+ + ++ GY
Sbjct: 737 ----------FTYNTFVSGYTAMGMFAEIEDVIECMAKNDC--RPNELTFKMVVDGYCRA 784
Query: 526 GQAKQAIEIFTMLE 539
G+ +A++ + ++
Sbjct: 785 GKYSEAMDFVSKIK 798
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 11/227 (4%)
Query: 429 EALELCK--------EMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD 480
E + LC+ E+L +G L SC+ L ++ K+ H ++S + D
Sbjct: 211 EVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGD 270
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEK 540
+ + +I M+ +C + D+K+VFD V + ++ M+C Y+ +G A+ +F + K
Sbjct: 271 PKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTK 330
Query: 541 NGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLE 600
+G+ PN+ TFL + AC+ G IE+ F M ++ I P++EHY ++ G+ G L
Sbjct: 331 HGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLV 390
Query: 601 EAYQIVQK---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPS 644
EA Q ++ + + W + + R H + + + + M++++PS
Sbjct: 391 EAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPS 437
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Query: 128 QRLFSEMWEV--EGLKPDNRTFVSLLKCCSTLGEV-----MQIHGLASKFGAETDAVVSS 180
+RL+ + E+ +G PD FV L + C+ L + + H L SKF D +++
Sbjct: 218 RRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKF--RGDPKLNN 275
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
++ ++ +C ++ +++FD M +KD W ++ Y+ N G++A+H F++M K +KP
Sbjct: 276 MVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL--LTLYANFGGLRDAEK 298
++ + AC + + +H +KN H L L + G L +AE+
Sbjct: 336 NEETFLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQ 394
Query: 299 LFRRI 303
R +
Sbjct: 395 YIRDL 399
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV 407
+ + +SC N L +++H ++S + N ++ M+ EC I DA + F +V
Sbjct: 239 FVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMV 298
Query: 408 CKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQL-------L 460
KD SW ++ Y NGM +AL L +EM G+ + +C+ + L
Sbjct: 299 DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFL 358
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM-EDSKKVFDAQVKPNEVIYNAM 518
+ K H + K+ + Y+G ++ + KCGH+ E + + D +P + AM
Sbjct: 359 HFDSMKNEHGISPKTEH----YLG--VLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 411
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 39 PNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACC 98
P+ F +L +CA ++H ++S D + ++ M+ S++ DA
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGE-CSSITDAKR 292
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG 158
VF ++++D+ +W++M+ ++ G LF EM + GLKP+ TF+++ C+T+G
Sbjct: 293 VFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTK-HGLKPNEETFLTVFLACATVG 351
Query: 159 EV----MQIHGLASKFGAETDAVVSSAMVDLYAKCG 190
+ + + ++ G ++ + KCG
Sbjct: 352 GIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCG 387
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 238/547 (43%), Gaps = 70/547 (12%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER---PNEYTFSVLLRACATPALWN 58
P NVVT+ TLI+ + G + +AF LF +VM++R P+ +S L+ +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLF---KVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLL----ERDLVAWNVM 114
+G ++ + G++ D SS + +Y +G +L A V+ +L ++V + ++
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG-DLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 115 ISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK--C-CSTLGEVMQIHGLASKFG 171
I G Q G ++ ++ + G++P T+ SL+ C C L ++ K G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 172 AETDAVVSSAMVDLYAKCG----DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAV 227
D V+ +VD +K G + K+ + V++S+I G+ NR +EA+
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 228 HFFKDMCKQRVKPDQHVLSSTLRACVEIEDL-------NTGVQVHGQMIKNGHQNDCFVA 280
F+ M +KPD ++ +R + +ED G+Q+ M +N D V
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSI-MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 281 SVLLTLYANFGGLRDAEKLFRRID----DKDIVAWNSMILAHAQLGQGSSRSMQLLQELH 336
+V++ L + DA K F + + DIV +N+MI + L + + + EL
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD--EAERIFELL 633
Query: 337 RTTSLQIQGATL-IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQ 395
+ T TL I I CKN +D+ ++ S +M S P NA+ + G
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKN-NDMDGAIRMFS-IMAEKGSKP----NAVTY-----GC 682
Query: 396 IGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS 455
+ D F VDI G++K L +EM +GI+ + S + I
Sbjct: 683 LMDWFSKSVDIE-----------GSFK----------LFEEMQEKGISPSIVSYSIIIDG 721
Query: 456 CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ----VKPN 511
+ ++ AI + DV + +I Y K G + ++ +++ VKP+
Sbjct: 722 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Query: 512 EVIYNAM 518
+++ A+
Sbjct: 782 DLLQRAL 788
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 131/608 (21%), Positives = 249/608 (40%), Gaps = 92/608 (15%)
Query: 100 FHDL-LERD----LVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC 154
FH L +ER +V+ N ++ G + V + RL S + + G P+ TF +L+
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDC-GPAPNVVTFCTLINGF 296
Query: 155 STLGEV---MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DN 207
GE+ + + + G E D + S ++D Y K G + K+F K D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
V+SS I Y + A +K M Q + P+ + ++ + + ++GQ
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 268 MIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSR 327
++K G + S L+ + G LR L+ +D + + ++ + L G S+
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY---EDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 328 SMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALV 387
QG L A+ S K ++ S+ +V N+L+
Sbjct: 474 ----------------QGLMLHAMRFSVK--------------MLGQSIRLNVVVFNSLI 503
Query: 388 HMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTS- 446
+ + +A K F ++G Y G++ + TFT+
Sbjct: 504 DGWCRLNRFDEALKVF------------RLMGIY---GIKPDV-----------ATFTTV 537
Query: 447 YSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-- 504
+ + + + + +G Q ++ + D+ V + +I + KC +ED+ K F
Sbjct: 538 MRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 597
Query: 505 --DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGY 562
+ +++P+ V YN MICGY + +A IF +L+ PN VT ++
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 563 IEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWRTLLSAC 622
++ + +F++M K KP + Y CL+D + ++ +E ++++ ++ + +++S
Sbjct: 658 MDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716
Query: 623 ----------RNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKM 672
R T I ++ +L P D +Y +L Y + G+ EA E M
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDA--KLLP-DVVAYAILIRGYCKVGRLVEAALLYEHM 773
Query: 673 AKTGVKKD 680
+ GVK D
Sbjct: 774 LRNGVKPD 781
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 194/446 (43%), Gaps = 98/446 (21%)
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
++SAM+ + G V+ ++IF++ + +S++IS Y + EEA+ F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 234 CKQRVKPDQHVLSSTLRAC----VEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
+ ++P+ ++ + AC +E + + + +M +NG Q D + LL + +
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQV---AKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 290 FGGLRDAEKLF-----RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQ 344
G A LF RRI+ +D+ ++N+++ A + GQ M L E+
Sbjct: 352 GGLWEAARNLFDEMTNRRIE-QDVFSYNTLLDAICKGGQ-----MDLAFEI--------- 396
Query: 345 GATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFV 404
+ +P R +M + VS+ T++ +++ G+ +A F
Sbjct: 397 -------------LAQMPVKR-----IMPNVVSYSTVIDG-----FAKAGRFDEALNLFG 433
Query: 405 DI----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLL 460
++ + D S+++++ Y + G EAL++ +EM + GI
Sbjct: 434 EMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI------------------ 475
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA----QVKPNEVIYN 516
DV ++++ Y K G ++ KKVF V PN + Y+
Sbjct: 476 -----------------KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYS 518
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
+I GY+ G K+A+EIF + G+ + V + A++ A G + ++L M K
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT-K 577
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEA 602
I P Y+ ++DA+GR+ ++ +
Sbjct: 578 EGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 167/406 (41%), Gaps = 53/406 (13%)
Query: 219 VNNRGE--EAVHFFKDMCK-QRVKPDQHVLSSTLRACV-EIEDLNTGVQVHGQMIKNGHQ 274
+ NR E +AV F++ K +R K +Q L+S + + + + ++ G+
Sbjct: 206 LGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYG 265
Query: 275 NDCFVASVLLTLYANFGGLRDAEKLFRRIDD----KDIVAWNSMILAHAQLGQGSSRSMQ 330
N + S L++ Y G +A +F + + ++V +N++I A + G + +
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMY 390
E+ R +Q T ++L C A R + + + N L+
Sbjct: 326 FFDEMQRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 391 SECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTS 446
+ GQ+ AF+ + K + S+S++I + + G EAL L EM GI
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 447 YSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS----KK 502
S YN +++ +Y K G E++ ++
Sbjct: 445 VS----------------------------YN-------TLLSIYTKVGRSEEALDILRE 469
Query: 503 VFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGY 562
+ +K + V YNA++ GY G+ + ++FT +++ V PN +T+ ++ S G
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 563 IEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
++ + +F ++ + YS L+DA + G + A ++ +
Sbjct: 530 YKEAMEIFR-EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 139/313 (44%), Gaps = 47/313 (15%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPAL-WNVGLQIH 64
V ++ LIS++ R+G +A +FN M+ RPN T++ ++ AC + + +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNG------------------------SNLRDACC-- 98
+ R+G++ D+ +SL+ + S G + L DA C
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 99 -----VFHDLLE-------RDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRT 146
F L + ++V+++ +I GFA+ G F LF EM + G+ D +
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL-GIALDRVS 446
Query: 147 FVSLLKCCSTLG---EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
+ +LL + +G E + I + G + D V +A++ Y K G +K+F M+
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 204 EK----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLN 259
+ + +S++I GY+ +EA+ F++ ++ D + S+ + A + +
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 260 TGVQVHGQMIKNG 272
+ V + +M K G
Sbjct: 567 SAVSLIDEMTKEG 579
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 137/288 (47%), Gaps = 24/288 (8%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
++V ++ TL+ + + G + AF++ M V PN ++S ++ A ++ L +
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFA 119
G + G+ D+ + ++L+ +Y+ G + +A + ++ +++D+V +N ++ G+
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRS-EEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAETDA 176
+ G + V+++F+EM + E + P+ T+ +L+ S G E M+I G D
Sbjct: 491 KQGKYDEVKKVFTEM-KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEK---DNFV-WSSIISGYTVNNRGEEAVHFFKD 232
V+ SA++D K G V S + D M ++ N V ++SII + + + + D
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSA----D 605
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI---KNGHQNDC 277
P SS L A E E N +Q+ GQ+ N DC
Sbjct: 606 YSNGGSLP---FSSSALSALTETEG-NRVIQLFGQLTTESNNRTTKDC 649
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 58/266 (21%)
Query: 468 FHVFAIKSGY--NHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKP---NEVI-YNAMICG 521
F+ FA+K N + S++I + G + +K++F+ N V ++A+I
Sbjct: 218 FYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISA 277
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQV--------------------------------- 548
Y G ++AI +F +++ G+ PN V
Sbjct: 278 YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQP 337
Query: 549 ---TFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI 605
TF ++L+ CS G E NLF M + +I+ + Y+ L+DA + G+++ A++I
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 606 VQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIE-LN----------PSDHASYILLSN 654
+ ++ + ++ +++ G A + E LN D SY L +
Sbjct: 397 L----AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 655 IYIEEGKWEEARDCREKMAKTGVKKD 680
IY + G+ EEA D +MA G+KKD
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKD 478
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 8/205 (3%)
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ--LLAINVGKQFHV 470
++S++I Y ++G+ EA+ + M G+ + I +C + + V K F
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 471 FAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA----QVKPNEVIYNAMICGYAHHG 526
++G D +S++ + ++ G E ++ +FD +++ + YN ++ G
Sbjct: 330 MQ-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 527 QAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY 586
Q A EI + + PN V++ ++ + AG ++ LNLF M Y I + Y
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY-LGIALDRVSY 447
Query: 587 SCLVDAYGRAGRLEEAYQIVQKDGS 611
+ L+ Y + GR EEA I+++ S
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMAS 472
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 109/598 (18%), Positives = 260/598 (43%), Gaps = 60/598 (10%)
Query: 93 LRDACCVFHDLLER----DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFV 148
L DA +F ++++ ++ ++ ++S A++ F +V L +M + G+ ++ T+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL-GIPHNHYTYS 120
Query: 149 SLLKCC---STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSM--- 202
L+ C S L + + G K G E + V S++++ Y +S + D M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 203 -EEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
+ + ++++I G ++N+ EA+ M + +PD + + D +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILA 317
+ +M + + + + ++ + + DA LF+ ++ K ++V ++S+I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 318 HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
G+ S S L + R + + T A++ + + L +++ ++K S+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDV--FTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALEL 433
+ ++L++ + ++ +A + F +V K D +++++I + + E +E+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
+EM G+ + + + I Q ++ ++
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF------------------------ 454
Query: 494 CGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAM 553
K++ V PN + YN ++ G +G+ ++A+ +F L+++ + P T+ M
Sbjct: 455 -------KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 554 LSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA---YQIVQKDG 610
+ AG +ED +LF + K +KP+ Y+ ++ + R G EEA ++ +++DG
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 611 S---ESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEA 665
+ + TL+ A + + + K+M + AS I L + +G+ +++
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 123/561 (21%), Positives = 228/561 (40%), Gaps = 74/561 (13%)
Query: 25 AFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVY 84
A LF +M P+ FS LL A A ++V + + + G+ + + S L+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 85 MYSNNGSNLRDACCVFHDLL----ERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGL 140
+ S L A V ++ E ++V + +++G+ L +M+ V G
Sbjct: 125 CFCRR-SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF-VTGY 182
Query: 141 KPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAVVSSAMVDLYAKCGDVSSCRK 197
+P+ TF +L+ + + L + G + D V +V+ K GD
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 198 IFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACV 253
+ + ME E ++++II G ++A++ FK+M + ++P+ SS +
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 254 EIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF----RRIDDKDIV 309
+ ++ MI+ D F S L+ + G L +AEKL+ +R D IV
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 310 AWNSMI---LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQ 366
++S+I H +L + + + + + H + + TLI CK K R
Sbjct: 363 TYSSLINGFCMHDRLDE-AKQMFEFMVSKHCFPDV-VTYNTLIKGF--CKYK------RV 412
Query: 367 IHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGM 426
+ + +S LVGN + +++ +I Q G
Sbjct: 413 EEGMEVFREMSQRGLVGNTV--------------------------TYNILIQGLFQAGD 446
Query: 427 ESEALELCKEMLAEGI-----TFTSYSLPLCISSCSQLLAINVGKQFHVFAI--KSGYNH 479
A E+ KEM+++G+ T+ + LC + + K VF +S
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG-------KLEKAMVVFEYLQRSKMEP 499
Query: 480 DVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICGYAHHGQAKQAIEIF 535
+Y + +I+ K G +ED +F VKP+ V YN MI G+ G ++A +F
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 536 TMLEKNGVTPNQVTFLAMLSA 556
++++G PN + ++ A
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRA 580
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 157/351 (44%), Gaps = 28/351 (7%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
V+ + T+I + + A LF +M RPN T+S L+ W+ ++
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQV 121
++ + D F S+L+ + G L +A ++ ++++R +V ++ +I+G
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEG-KLVEAEKLYDEMVKRSIDPSIVTYSSLING---- 370
Query: 122 GDFCMVQRL--FSEMWEVEGLK---PDNRTFVSLLK-CC--STLGEVMQIHGLASKFGAE 173
FCM RL +M+E K PD T+ +L+K C + E M++ S+ G
Sbjct: 371 --FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHF 229
+ V + ++ + GD ++IF M + +++++ G N + E+A+
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
F+ + + +++P + + + + + G + + G + D + +++ +
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 290 FGGLRDAEKLFRRIDDKDIVA----WNSMILAHAQLGQGSSRSMQLLQELH 336
G +A+ LF+ + + + +N++I A + G + S +L++E+
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA-SAELIKEMR 598
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 129/317 (40%), Gaps = 46/317 (14%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
NVVT+++LIS G A +L +DM P+ +TFS L+ A +++
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 65 GVLVRSGLERDKFAGSSLV-----------------YMYSNNG-------SNLRDACC-- 98
+V+ ++ SSL+ +M S + + L C
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 99 --------VFHDLLERDLVA----WNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRT 146
VF ++ +R LV +N++I G Q GD M Q +F EM +G+ P+ T
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS-DGVPPNIMT 468
Query: 147 FVSLLK-CCST--LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
+ +LL C L + M + + E + M++ K G V +F ++
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 204 EK----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLN 259
K D ++++ISG+ EEA FK+M + P+ ++ +RA + D
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 260 TGVQVHGQMIKNGHQND 276
++ +M G D
Sbjct: 589 ASAELIKEMRSCGFAGD 605
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 135/669 (20%), Positives = 288/669 (43%), Gaps = 72/669 (10%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
R T+ TLI + +AG + A LF++M + TF+ ++ C T + +
Sbjct: 303 RLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESL 362
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFA 119
+ G+ D + L+ ++++ G ++ A + + L D V ++
Sbjct: 363 LKKMEEKGISPDTKTYNILLSLHADAG-DIEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS 179
Q V+ + +EM + ++ D + +++ G V+Q L +F + D V+S
Sbjct: 422 QRKMVAEVEAVIAEM-DRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF--QLDCVLS 478
Query: 180 S----AMVDLYAKCGDVSSCRKIFD-----SMEEKDNFVWSSIISGYTVNNRGEEAVHFF 230
S A++D+YA+ G +F S + D ++ +I Y E+A+ F
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
K M Q PD+ +S + ++ ++ ++ +M+ +G + C + ++ Y
Sbjct: 539 KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRL 598
Query: 291 GGLRDAEKLFRRIDDKDI----VAWNSMILAHAQLG--QGSSRSMQLLQELHRTTSLQIQ 344
G L DA L+ ++ + V + S+I A+ G + + + ++++E H S I
Sbjct: 599 GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEE-HGVQSNHI- 656
Query: 345 GATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDA---F 400
L +++K+ L R+++ MK S P + N+++ + ++ G + +A F
Sbjct: 657 --VLTSLIKAYSKVGCLEEARRVYD-KMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Query: 401 KAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGI---------TFTSYSLPL 451
A + D S+++++ YK GM EA+E+ +EM G+ Y+
Sbjct: 714 NALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADG 773
Query: 452 CISSCSQL---------LAINVGKQFHVFA--------------IKSGYNHDVYVGSSII 488
+S C +L L ++ G +F +++ YN + + I
Sbjct: 774 QLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAI 833
Query: 489 --DMYAKCG----HMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG 542
+++ G +E +++ ++ YNA+I Y+ G A++ + +++ G
Sbjct: 834 TATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKG 893
Query: 543 VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA 602
+ P+ VT ++ AG +E + + + + +++P + + DAY A R + A
Sbjct: 894 LEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFG-ELEPSQSLFKAVRDAYVSANRQDLA 952
Query: 603 YQIVQKDGS 611
+V+K+ S
Sbjct: 953 -DVVKKEMS 960
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 147/707 (20%), Positives = 282/707 (39%), Gaps = 100/707 (14%)
Query: 10 TTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWN------VGLQI 63
T L+ R V + F+ F + PN ++++LRA W+ + +
Sbjct: 116 TVLLKEQTRWERVLRVFRFFQSHQ--SYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAH 173
Query: 64 HGVLVRS---GLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMIS 116
+GVL + G+ D + + LV ++A + +R D V ++
Sbjct: 174 NGVLPTNNTYGMLVDVYGKAGLV----------KEALLWIKHMGQRMHFPDEVTMATVVR 223
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLAS---KFGAE 173
F G+F R F + W + D + K S V L+ K GA
Sbjct: 224 VFKNSGEFDRADRFF-KGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGAR 282
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
S L+ G SS RK + ++++I Y R +A + F +M
Sbjct: 283 NPIEKS-----LHFASGSDSSPRK------PRLTSTFNTLIDLYGKAGRLNDAANLFSEM 331
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
K V D ++ + C L+ + +M + G D ++LL+L+A+ G +
Sbjct: 332 LKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDI 391
Query: 294 RDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM-----QLLQELHRTTSLQIQGATL 348
A + +R+I + + + + A L R M ++ E+ R S++I ++
Sbjct: 392 EAALEYYRKI--RKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN-SIRIDEHSV 448
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF----- 403
I++ N+ + + + V T + A++ +Y+E G +A F
Sbjct: 449 PVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLA-AVIDVYAEKGLWVEAETVFYGKRN 507
Query: 404 VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAIN 463
+ D ++ +I Y + + +AL L K M +G + P C+
Sbjct: 508 MSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG------TWP---DECT------ 552
Query: 464 VGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMI 519
YN S+ M A +++++++ D+ KP Y AMI
Sbjct: 553 -------------YN-------SLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 520 CGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKI 579
Y G A++++ +EK GV PN+V + ++++ + +G +E+ + F +M ++ +
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM-EEHGV 651
Query: 580 KPESEHYSCLVDAYGRAGRLEEAYQIVQK----DGSE--SAWRTLLSACRNHNNTKIGEK 633
+ + L+ AY + G LEEA ++ K +G +A ++LS C + E
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAES 711
Query: 634 SAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
+ E D S+ + +Y G +EA + E+M ++G+ D
Sbjct: 712 IFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 136/659 (20%), Positives = 273/659 (41%), Gaps = 49/659 (7%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V T ++ ++A + + + + MR RP ++ L+ A + ++ L +
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFAQ 120
+ G E ++L+ ++ G + A + ++ L+ D+V +NV I F +
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEG-RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC---CSTLGEVMQIHGLASKFGAETDAV 177
VG M + F E+ E GLKPD T+ S++ + L E +++ K
Sbjct: 251 VGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNF----VWSSIISGYTVNNRGEEAVHFFKDM 233
+ M+ Y G + + K + ++ I++ + +EA+ F++M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
K+ P+ + + L+T ++ M K G + ++++ L
Sbjct: 370 -KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 294 RDAEKLFRRIDDK----DIVAWNSMILAHAQLGQ---GSSRSMQLLQELHRTTSLQIQGA 346
+A +F +D K D + + S+I ++G+ ++L RT S+
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI----- 483
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSEC----GQIGDAFKA 402
+++K+ N G +I+ ++ + S P L L++ Y +C G+
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCS-PDL---QLLNTYMDCMFKAGEPEKGRAM 539
Query: 403 FVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
F +I + D S+S +I + G +E EL M +G + + + I +
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 459 LLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD----AQVKPNEVI 514
+N Q G+ V S+ID AK ++++ +F+ +++ N VI
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 515 YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLML 574
Y+++I G+ G+ +A I L + G+TPN T+ ++L A A I + L F M
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM- 718
Query: 575 YKYKIKPESEHYSCLVDAYGRAGRLEEAY---QIVQKDG---SESAWRTLLSACRNHNN 627
+ K P Y L++ + + +A+ Q +QK G S ++ T++S N
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 114/640 (17%), Positives = 258/640 (40%), Gaps = 63/640 (9%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
+TTLI + G V A L ++M+ + ++V + + ++ + +
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 69 RSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLV----AWNVMISGFAQVGDF 124
+GL+ D+ +S++ + + L +A +F L + V A+N MI G+ G F
Sbjct: 266 ANGLKPDEVTYTSMIGVLCK-ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS--AM 182
L E +G P + +L C +G+V + + + + +S+ +
Sbjct: 325 DEAYSLL-ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNIL 383
Query: 183 VDLYAKCGDVSSCRKIFDSMEEKDNF----VWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
+D+ + G + + ++ DSM++ F + ++ + + +EA F++M +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK 298
PD+ S + ++ ++ +V+ +M+ + + + V + L+ + N G D K
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 299 LFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNK 358
++ KD++ Q S +QLL + A+ + K +
Sbjct: 504 IY-----KDMI------------NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Query: 359 SDLPAGRQ----IHSLVMKSSVSHP---------------TLVGNALVHMYSECGQIGDA 399
+P R IH L+ + T N ++ + +CG++ A
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 400 FKAFVDIVCKDDS----SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS 455
++ ++ K ++ S+I + EA L +E ++ I I
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 456 CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA----QVKPN 511
++ I+ ++ G ++Y +S++D K + ++ F + + PN
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 512 EVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFT 571
+V Y +I G + +A + ++K G+ P+ +++ M+S + AG I + LF
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 572 LMLYKYKIK---PESEHYSCLVDAYGRAGRLEEAYQIVQK 608
++K P+S Y+ +++ R +A+ + ++
Sbjct: 787 ----RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/578 (19%), Positives = 240/578 (41%), Gaps = 42/578 (7%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGV 66
VT+T++I +A + +A ++F + P Y ++ ++ + ++ +
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL--- 330
Query: 67 LVRSGLERDKFAGS-SLVYMYSNNGSNLR------DACCVFHDLLE---RDLVAWNVMIS 116
LER + GS V Y+ + LR +A VF ++ + +L +N++I
Sbjct: 331 -----LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILID 385
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTF-VSLLKCCST--LGEVMQIHGLASKFGAE 173
+ G L M + GL P+ RT + + + C + L E +
Sbjct: 386 MLCRAGKLDTAFELRDSMQKA-GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD----NFVWSSIISGYTVNNRGEEAVHF 229
D + +++D K G V K+++ M + D + V++S+I + + R E+
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
+KDM Q PD +L++ + + + G + ++ D S+L+
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 290 FGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG 345
G + +LF + ++ D A+N +I + G+ +++ QLL+E+ +T +
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK-VNKAYQLLEEM-KTKGFEPTV 622
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVD 405
T +++ L + + ++ ++L+ + + G+I +A+ +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 406 IVCKDDS----SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLA 461
++ K + +W+S++ + +EAL + M T + + I+ ++
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 462 INVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK-----PNEVIYN 516
N F K G +++I AK G++ ++ +FD + K P+ YN
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD-RFKANGGVPDSACYN 801
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAML 554
AMI G ++ +A A +F + G+ + T + +L
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 476 GYNHDVYVGSSIIDMYAKCGHMEDSKKVFD----AQVKPNEVIYNAMICGYAHHGQAKQA 531
GY V++ +++I +AK G ++ + + D + + + V+YN I + G+ A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 532 IEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVD 591
+ F +E NG+ P++VT+ +M+ A +++ + +F L K + P + Y+ ++
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE-HLEKNRRVPCTYAYNTMIM 316
Query: 592 AYGRAGRLEEAYQIVQKDGSES------AWRTLLSACRNHNNTKIGEKSAKKMIELNPSD 645
YG AG+ +EAY ++++ ++ A+ +L+ R K ++M + +
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPN 376
Query: 646 HASYILLSNIYIEEGKWEEARDCREKMAKTGV 677
++Y +L ++ GK + A + R+ M K G+
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 28/298 (9%)
Query: 161 MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVN 220
+Q+H + S + + ++ ++ CG + R++FD M +D W+ + G
Sbjct: 110 LQVHIMKSSIRPTITFI--NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEM 167
Query: 221 NRGEEAVHFFKDMCKQR----VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH--Q 274
E+A F M K K +L L+AC I D G QVH K G +
Sbjct: 168 GDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDE 227
Query: 275 NDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQE 334
D +++ L+ Y F L DA + ++ + + VAW + + + G+ QE
Sbjct: 228 EDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGE--------FQE 279
Query: 335 LHR------TTSLQIQGATLIAILKSCKNKSD-LPAGRQIHSLVMKSSVSHPTLVGNALV 387
+ R ++ + +LK+C SD +G+Q+H+ +K L+ L+
Sbjct: 280 VIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLI 339
Query: 388 HMYSECGQIGDAFKAFVDIVCKDDSS---WSSIIGTYKQNGMESEALELCKEMLAEGI 442
MY + G++ DA K F KD++S W++++ +Y QNG+ EA++L +M A GI
Sbjct: 340 EMYGKYGKVKDAEKVFKS--SKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGI 395
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 119/258 (46%), Gaps = 15/258 (5%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDER-----PNEYTFSVLLRACATPA 55
MPHR+ +W + + G A LF M ++ P+ + +L+ACA
Sbjct: 149 MPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPS-WILGCVLKACAMIR 207
Query: 56 LWNVGLQIHGVLVRSGL--ERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNV 113
+ +G Q+H + + G E D + SL+ Y L DA V H L + VAW
Sbjct: 208 DFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRC-LEDANLVLHQLSNANTVAWAA 266
Query: 114 MISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGE----VMQIHGLASK 169
++ + G+F V R F EM G+K + F ++LK CS + + Q+H A K
Sbjct: 267 KVTNDYREGEFQEVIRDFIEMGN-HGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIK 325
Query: 170 FGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNF-VWSSIISGYTVNNRGEEAVH 228
G E+D ++ ++++Y K G V K+F S +++ + W+++++ Y N EA+
Sbjct: 326 LGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIK 385
Query: 229 FFKDMCKQRVKPDQHVLS 246
M +K +L+
Sbjct: 386 LLYQMKATGIKAHDTLLN 403
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 10/234 (4%)
Query: 99 VFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMW---EVEGLKPDNRTFVSLLKCCS 155
+F + RD +W ++ G ++GD+ LF M + K + +LK C+
Sbjct: 145 MFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACA 204
Query: 156 TLGEV---MQIHGLASKFG--AETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVW 210
+ + Q+H L K G E D+ +S +++ Y + + + + + W
Sbjct: 205 MIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAW 264
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDL-NTGVQVHGQMI 269
++ ++ +E + F +M +K + V S+ L+AC + D +G QVH I
Sbjct: 265 AAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAI 324
Query: 270 KNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA-WNSMILAHAQLG 322
K G ++DC + L+ +Y +G ++DAEK+F+ D+ V+ WN+M+ ++ Q G
Sbjct: 325 KLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 6/267 (2%)
Query: 283 LLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTT--S 340
LL ++ + G L ++F R+ +D +W + L ++G + + L + +
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 341 LQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSV--SHPTLVGNALVHMYSECGQIGD 398
+I L +LK+C D G+Q+H+L K + + +L+ Y E + D
Sbjct: 189 FKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLED 248
Query: 399 AFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQ 458
A + + +W++ + + G E + EM GI + +CS
Sbjct: 249 ANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSW 308
Query: 459 LL-AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEV-IYN 516
+ G+Q H AIK G+ D + +I+MY K G ++D++KVF + V +N
Sbjct: 309 VSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWN 368
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGV 543
AM+ Y +G +AI++ ++ G+
Sbjct: 369 AMVASYMQNGIYIEAIKLLYQMKATGI 395
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 116/280 (41%), Gaps = 9/280 (3%)
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD 410
+ K ++D ++ +MKSS+ N L+ M+ CG++ + F + +D
Sbjct: 94 LAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRD 153
Query: 411 DSSWSSI-IGTYKQNGMESEA---LELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK 466
SW+ + +G + E A + + K S+ L + +C+ + +GK
Sbjct: 154 FHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGK 213
Query: 467 QFHVFAIKSGY--NHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAH 524
Q H K G+ D Y+ S+I Y + +ED+ V N V + A +
Sbjct: 214 QVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYR 273
Query: 525 HGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESE 584
G+ ++ I F + +G+ N F +L ACS + K + +
Sbjct: 274 EGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCL 333
Query: 585 HYSCLVDAYGRAGRLEEAYQIVQKDGSE---SAWRTLLSA 621
L++ YG+ G++++A ++ + E S W ++++
Sbjct: 334 IRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVAS 373
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 140/632 (22%), Positives = 266/632 (42%), Gaps = 76/632 (12%)
Query: 3 HRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQ 62
+R+VV+++ LI + G+V +A L M PN T++ ++R
Sbjct: 274 NRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFV 333
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGF 118
+ ++ G+E D+F +L+ G NL A + D+ +R ++ +N +I+G
Sbjct: 334 LFNRILSVGIEVDEFLYVTLIDGICRKG-NLNRAFSMLGDMEQRGIQPSILTYNTVINGL 392
Query: 119 AQVGDFCMVQRLFSEMWEV-EGLKPDNRTFVSLLKC---CSTLGEVMQIHGLASKFGAET 174
CM R+ SE EV +G+ D T+ +LL + V++I +
Sbjct: 393 ------CMAGRV-SEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPM 445
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFF 230
D V+ + ++ + G ++ +M E D ++++I GY + EEA+ F
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL-TLYAN 289
++ K V + + A + L+T +V ++ + G D + LL +++AN
Sbjct: 506 NELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHAN 564
Query: 290 FGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLI 349
G DK I+ ++ QL S + +L +
Sbjct: 565 GG-------------DKGILG---LVYGLEQLN--SDVCLGMLND--------------- 591
Query: 350 AILKSCKNKSDLPAGRQIHSLVMKS--SVSHPTLVGNALVH------MYSECGQIGDAFK 401
AIL CK S A +++ ++ + +V+ P+ + LV Y G+
Sbjct: 592 AILLLCKRGS-FEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTL 650
Query: 402 AFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS-CSQLL 460
+ +D++ ++ II + G +AL LC + G+T + + I+ C Q
Sbjct: 651 SSMDVI-----DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGC 705
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK----PNEVIYN 516
+ + F +V G +ID K G D++K+ D+ V PN +IYN
Sbjct: 706 LVEALRLFDSLENIGLVPSEVTYGI-LIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYN 764
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
+++ GY GQ + A+ + + VTP+ T +M+ G +E+ L++FT K
Sbjct: 765 SIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDK 824
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
I + + L+ + GR+EEA ++++
Sbjct: 825 -NISADFFGFLFLIKGFCTKGRMEEARGLLRE 855
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 147/719 (20%), Positives = 306/719 (42%), Gaps = 104/719 (14%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N+VT+TTL+S+ + G V + L +R +++ E+ C + W IH
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDL---VRRLEDEGFEFD-------CVFYSNW-----IH 250
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE----RDLVAWNVMISGFAQ 120
G F G +LV DA +++E RD+V+++++I G ++
Sbjct: 251 GY----------FKGGALV-----------DALMQDREMVEKGMNRDVVSYSILIDGLSK 289
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAV 177
G+ L +M + EG++P+ T+ ++++ +G++ + L ++ G E D
Sbjct: 290 EGNVEEALGLLGKMIK-EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEF 348
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ ++D + G+++ + ME++ ++++I+G + R EA D
Sbjct: 349 LYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DE 403
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
+ V D S+ L + +++++++ +++ + ++ D + ++LL + G
Sbjct: 404 VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAY 463
Query: 294 RDAEKLFRRIDDKDIV----AWNSMILAHAQLGQGSSRSMQLLQELHRTT-SLQIQGATL 348
+A+ L+R + + D+ + +MI + + GQ ++++ EL +++ S + +
Sbjct: 464 GEADALYRAMPEMDLTPDTATYATMIKGYCKTGQ-IEEALEMFNELRKSSVSAAVCYNRI 522
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
I L CK K L ++ + + + L+H G GD K + +V
Sbjct: 523 IDAL--CK-KGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG--GD--KGILGLVY 575
Query: 409 KDDSSWSSI--------IGTYKQNGMESEALELCKEMLAEG--ITFTSYSLPLCISSC-- 456
+ S + I + G A+E+ M +G +TF S L + +
Sbjct: 576 GLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRS 635
Query: 457 --SQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVI 514
+ LL +N G+ + + DV + II+ K G + + + + K V
Sbjct: 636 LDAYLLVVNAGET-------TLSSMDVIDYTIIINGLCKEGFLVKALNLC-SFAKSRGVT 687
Query: 515 YNAMICGYAHHGQAKQ-----AIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNL 569
N + +G +Q A+ +F LE G+ P++VT+ ++ G D L
Sbjct: 688 LNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKL 747
Query: 570 FTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDG----SESAWRTLLSACRNH 625
M+ K + P Y+ +VD Y + G+ E+A ++V + + A+ T+ S + +
Sbjct: 748 LDSMVSK-GLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAF-TVSSMIKGY 805
Query: 626 NNTKIGEKSAKKMIELN----PSDHASYILLSNIYIEEGKWEEARD-CREKMAKTGVKK 679
E++ E +D ++ L + +G+ EEAR RE + V K
Sbjct: 806 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVK 864
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/451 (18%), Positives = 190/451 (42%), Gaps = 55/451 (12%)
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK------DNFVWSSIISGYTVNNRGE 224
GA ++ +++ + + G++ + ++ + M K DNFV S++ISG+ + E
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 225 EAVHFFKDMCKQRV-KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL 283
A+ FF+ V P+ ++ + A ++ ++ + ++ G + DC S
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 284 LTLYANFGGLRDA----EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTT 339
+ Y G L DA ++ + ++D+V+++ +I ++ G ++ LL ++ +
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN-VEEALGLLGKMIK-E 306
Query: 340 SLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDA 399
++ T AI++ L + + ++ + + L+ G + A
Sbjct: 307 GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRA 366
Query: 400 FKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQL 459
F S++G +Q G++ L T+ + LC++
Sbjct: 367 F---------------SMLGDMEQRGIQPSIL-----------TYNTVINGLCMA----- 395
Query: 460 LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGH----MEDSKKVFDAQVKPNEVIY 515
G+ + G DV S+++D Y K + +E ++ +A++ + V+
Sbjct: 396 -----GRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC 450
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY 575
N ++ + G +A ++ + + +TP+ T+ M+ G IE+ L +F L
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN-ELR 509
Query: 576 KYKIKPESEHYSCLVDAYGRAGRLEEAYQIV 606
K + + Y+ ++DA + G L+ A +++
Sbjct: 510 KSSVSA-AVCYNRIIDALCKKGMLDTATEVL 539
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 128/646 (19%), Positives = 276/646 (42%), Gaps = 88/646 (13%)
Query: 1 MPHRNVVTWT----TLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPAL 56
M R VV + ++SS +R+ + +A +++N M ++ + T +L+RA
Sbjct: 195 MVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERK 254
Query: 57 WNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMIS 116
++I ++ G E D S V A C
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAV-----------QAAC------------------ 285
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAE 173
+ D M L EM G+ T+ S++ G E +++ FG
Sbjct: 286 ---KTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIP 342
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHF 229
+ ++++V+ Y K ++ +F+ MEE+ D ++S ++ + N E+A+ F
Sbjct: 343 MSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEF 402
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKN--GHQNDCFVASVLLTLY 287
+ M R+ P ++ + ++ C++ E +++ ++ H F+ + + L+
Sbjct: 403 YMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG---FMCNKIFLLF 459
Query: 288 ANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQL-GQGSSRSM------QLLQELH 336
G + A + ++ K ++V +N+M+LAH ++ +RS+ + L+ +
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 337 RTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQI 396
T S+ I G KNK + A I+ + S+ ++ N +++ + GQ
Sbjct: 520 FTYSILIDGF--------FKNKDEQNAWDVINQM-NASNFEANEVIYNTIINGLCKVGQT 570
Query: 397 GDAFKAFVDIVCKDD-----SSWSSIIGTYKQNGMESEALELCKEMLAEG-----ITFTS 446
A + +++ + +S++SII + + G A+E +EM G +TFTS
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTS 630
Query: 447 YSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-- 504
C S+ LA+ + + +K D+ ++ID + K M+ + +F
Sbjct: 631 LINGFCKSNRMD-LALEMTHEMKSMELK----LDLPAYGALIDGFCKKNDMKTAYTLFSE 685
Query: 505 --DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGY 562
+ + PN +YN++I G+ + G+ AI+++ + +G++ + T+ M+ G
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
Query: 563 IEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
I +L++ +L I P+ + LV+ + G+ +A +++++
Sbjct: 746 INLASDLYSELL-DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEE 790
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 106/594 (17%), Positives = 263/594 (44%), Gaps = 28/594 (4%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRA-CATPALWNVGLQIHG 65
VT L+ + LR +A ++F + P+ FS+ ++A C TP L +
Sbjct: 240 VTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLRE 299
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFAQV 121
+ + G+ + +S++ + G N+ +A V ++ + ++A +++G+ +
Sbjct: 300 MRGKLGVPASQETYTSVIVAFVKEG-NMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKG 358
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK-CCSTLG--EVMQIHGLASKFGAETDAVV 178
+ LF+ M E EGL PD F +++ C + + ++ + +V+
Sbjct: 359 NELGKALDLFNRMEE-EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVL 417
Query: 179 SSAMVDLYAKCGDVSSCRKIF-DSMEE--KDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
M+ K + +IF DS E F+ + I + + + A F K M +
Sbjct: 418 VHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQ 477
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+ ++P+ ++ + A +++++ + +M++ G + + F S+L+ + ++
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQN 537
Query: 296 AEKLFRRIDDKDI----VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
A + +++ + V +N++I ++GQ +S++ ++LQ L + + + +I
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQ-TSKAKEMLQNLIKEKRYSMSCTSYNSI 596
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI----V 407
+ D + + + + ++ S + +L++ + + ++ A + ++ +
Sbjct: 597 IDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMEL 656
Query: 408 CKDDSSWSSII-GTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK 466
D ++ ++I G K+N M++ A L E+ G+ IS L ++
Sbjct: 657 KLDLPAYGALIDGFCKKNDMKT-AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAI 715
Query: 467 QFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICGY 522
+ + G + D++ +++ID K G++ + ++ D + P+E+++ ++ G
Sbjct: 716 DLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGL 775
Query: 523 AHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
+ GQ +A ++ ++K VTPN + + +++ G + + L ML K
Sbjct: 776 SKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 146/343 (42%), Gaps = 34/343 (9%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLL----RACATPALWNVG 60
NVV + ++ +H R ++ A +F++M PN +T+S+L+ + W+V
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNG----SNLRDACCVFHDLLER-----DLVAW 111
Q++ F + ++Y NG A + +L++ ++
Sbjct: 543 NQMNA---------SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSY 593
Query: 112 NVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK--CCSTLGEV-MQIHGLAS 168
N +I GF +VGD + EM E G P+ TF SL+ C S ++ +++
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSE-NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 169 KFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGE 224
+ D A++D + K D+ + +F + E + V++S+ISG+ + +
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 225 EAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLL 284
A+ +K M + D ++ + ++ ++N ++ +++ G D + VL+
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLV 772
Query: 285 TLYANFGGLRDAEKLFRRIDDKDIVA----WNSMILAHAQLGQ 323
+ G A K+ + KD+ ++++I H + G
Sbjct: 773 NGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGN 815
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/504 (18%), Positives = 204/504 (40%), Gaps = 60/504 (11%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLR---------------- 49
V+ T+L++ + + + KA LFN M P++ FSV++
Sbjct: 345 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYM 404
Query: 50 ----ACATPALWNVGLQIHGVLVRSGLE------RDKFAG--------SSLVYMYSNNGS 91
P+ V I G L E D F + + ++ G
Sbjct: 405 RMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGK 464
Query: 92 NLRDACCVFHDLLER-----DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRT 146
DA F ++E+ ++V +N M+ ++ + + + +FSEM E +GL+P+N T
Sbjct: 465 --VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE-KGLEPNNFT 521
Query: 147 FVSLLKCCSTLGEVMQIHGLASKFGA---ETDAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
+ L+ + + ++ A E + V+ + +++ K G S +++ ++
Sbjct: 522 YSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Query: 204 EKDNFV-----WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDL 258
++ + ++SII G+ + AV +++M + P+ +S + + +
Sbjct: 582 KEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRM 641
Query: 259 NTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD----KDIVAWNSM 314
+ +++ +M + D L+ + ++ A LF + + ++ +NS+
Sbjct: 642 DLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL 701
Query: 315 ILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKS 374
I LG+ + ++ L +++ + T ++ ++ ++S ++
Sbjct: 702 ISGFRNLGKMDA-AIDLYKKM-VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL 759
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS----WSSIIGTYKQNGMESEA 430
+ ++ LV+ S+ GQ A K ++ KD + +S++I + + G +EA
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Query: 431 LELCKEMLAEGITFTSYSLPLCIS 454
L EML +GI L +S
Sbjct: 820 FRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/353 (17%), Positives = 149/353 (42%), Gaps = 14/353 (3%)
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
++ +++ Y N R + AV F M ++V P +++ L + V ++ +++ +M+
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 270 KNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRI----DDKDIVAWNSMILAHAQLGQGS 325
G D +L+ +A K+FRR+ + D + + S+ + A
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLF-SLAVQAACKTPDL 290
Query: 326 SRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNA 385
++ LL+E+ + T +++ + + ++ ++ ++ + + +
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS 350
Query: 386 LVHMYSECGQIGDAFKAFVDI----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEG 441
LV+ Y + ++G A F + + D +S ++ + +N +A+E M +
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 442 ITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS- 500
I +S + I C + + + + +S H ++ + I ++ K G ++ +
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG-FMCNKIFLLFCKQGKVDAAT 469
Query: 501 ---KKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTF 550
K + ++PN V YN M+ + A IF+ + + G+ PN T+
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 117/610 (19%), Positives = 265/610 (43%), Gaps = 75/610 (12%)
Query: 52 ATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----D 107
A+P+ G+ G L G R+K + ++L+++ L +A +F ++++
Sbjct: 13 ASPSFCLRGIYFSG-LSYDGY-REKLSRNALLHL------KLDEAVDLFGEMVKSRPFPS 64
Query: 108 LVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIH 164
+V ++ ++S A++ F +V F E E+ G+ + T+ ++ C S L + I
Sbjct: 65 IVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 165 GLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVN 220
G K G V +++++ + +S + D M E D +++++ G +
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 221 NRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA 280
N+ EAV + M + +PD + + + + + + + +M K + D +
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 281 SVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELH 336
S ++ + + DA LF +D+K D+ ++S+I G+ S S L L
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 337 RTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQI 396
R + + T +++ + + L ++ +++ S+ + N+L++ + ++
Sbjct: 304 RKINPNV--VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 397 GDAFKAFVDIVCKD----DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC 452
+A + F +V KD +++++I + + + +EL ++M G+ + +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY--- 418
Query: 453 ISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK--- 509
+++I + + ++++ VF V
Sbjct: 419 --------------------------------TTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 510 -PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLN 568
PN + YN ++ G +G+ ++A+ +F L+K+ + P+ T+ M AG +ED +
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 569 LFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI---VQKDGSESAWRTLLSACRNH 625
LF + K +KP+ Y+ ++ + + G EEAY + +++DG T + R H
Sbjct: 507 LFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Query: 626 NNTKIGEKSA 635
+ G+K+A
Sbjct: 566 --LRDGDKAA 573
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/575 (19%), Positives = 233/575 (40%), Gaps = 91/575 (15%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P ++V ++ L+S+ + M ++ N YT+++++ + + L
Sbjct: 61 PFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFAL 120
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
I G +++ G G S+V + N +++GF
Sbjct: 121 AILGKMMKLGY------GPSIVTL--------------------------NSLLNGFCHG 148
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSA 181
L +M E+ G +PD TF +L +HGL A +
Sbjct: 149 NRISEAVALVDQMVEM-GYQPDTVTFTTL------------VHGLFQHNKASEAVALVER 195
Query: 182 MVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPD 241
MV V C + D + ++I+G + A++ M K +++ D
Sbjct: 196 MV--------VKGC--------QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 242 QHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF- 300
+ S+ + + + ++ + + +M G + D F S L++ N+G DA +L
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 301 ----RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
R+I + ++V +NS+I A A+ G+ + + R+ I T +++
Sbjct: 300 DMLERKI-NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI--VTYNSLINGFC 356
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI----VCKDDS 412
L +QI +L++ + N L++ + + ++ D + F D+ + +
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGI-----TFTSYSLPLCISSCSQLLAINVGKQ 467
+++++I + Q A + K+M+++G+ T+ + LC + + K
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG-------KLEKA 469
Query: 468 FHVFAI--KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA----QVKPNEVIYNAMICG 521
VF KS D+Y + + + K G +ED +F + VKP+ + YN MI G
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSA 556
+ G ++A +F ++++G P+ T+ ++ A
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 165/350 (47%), Gaps = 24/350 (6%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+VV ++T+I S + V A LF +M RP+ +T+S L+ W+ ++
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQ 120
++ + + +SL+ ++ G L +A +F ++++R ++V +N +I+GF
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEG-KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETDAV 177
Q++F+ M + L PD T+ +L+ +V M++ S+ G + V
Sbjct: 358 HDRLDEAQQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ ++ + + D + + +F M + +++++ G N + E+A+ F+ +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 234 CKQRVKPDQH---VLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
K +++PD + ++S + ++ED G + + G + D + +++ +
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVED---GWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 291 GGLRDAEKLFRRIDD----KDIVAWNSMILAHAQLGQGSSRSMQLLQELH 336
G +A LF ++ + D +N++I AH + G ++ S +L++E+
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA-SAELIKEMR 582
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/456 (18%), Positives = 200/456 (43%), Gaps = 31/456 (6%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++VT +L++ + +A L + M M +P+ TF+ L+ + + +
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLL--------ERDLVAWNVMIS 116
+V G + D +++ NG R + +LL E D+V ++ +I
Sbjct: 194 ERMVVKGCQPDLVTYGAVI-----NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAE 173
+ LF+EM + +G++PD T+ SL+ C G L S
Sbjct: 249 SLCKYRHVDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD---NFV-WSSIISGYTVNNRGEEAVHF 229
+ V ++++D +AK G + K+FD M ++ N V ++S+I+G+ +++R +EA
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
F M + PD ++ + + + + G+++ M + G + + L+ +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 290 FGGLRDAEKLFRR-IDD---KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG 345
+A+ +F++ + D +I+ +N+++ + G+ ++M + + L + + ++
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQK-SKMEPDI 485
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFV- 404
T + + + G + + V + N ++ + + G +A+ F+
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 405 ---DIVCKDDSSWSSIIGTYKQNGMESEALELCKEM 437
D D +++++I + ++G ++ + EL KEM
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 113/567 (19%), Positives = 243/567 (42%), Gaps = 93/567 (16%)
Query: 12 LISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRA-CATPALWNVGLQIHGVLVRS 70
LI S +R G V A+ ++ ++ N YT ++++ A C + VG + V
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ-EK 264
Query: 71 GLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFAQVGDFCM 126
G+ D ++L+ YS+ G + +A + + + + +N +I+G + G +
Sbjct: 265 GVYPDIVTYNTLISAYSSKGL-MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 127 VQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAE---TDAVVSSAMV 183
+ +F+EM GL PD+ T+ SLL G+V++ + S + D V S+M+
Sbjct: 324 AKEVFAEMLR-SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 184 DLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVK 239
L+ + G++ F+S++E DN +++ +I GY A++ +M +Q
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 240 PDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKL 299
D ++ L + + L ++ +M + D + ++L+ + G L++A +L
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 300 FRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSC 355
F+++ +K D+V +N+++ ++G
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVG--------------------------------- 529
Query: 356 KNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSW- 414
D+ ++I + ++ + + + LV+ G + +AF+ + +++ K+
Sbjct: 530 ----DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 415 ---SSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVF 471
+S+I Y ++G S+ ++M++EG +P CIS
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGF------VPDCIS----------------- 622
Query: 472 AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ--VKPNEVIYNAMICGYAHHGQAK 529
YN +Y +M G + KK+ + Q + P+ YN+++ G+ Q K
Sbjct: 623 -----YNTLIYGFVREENMSKAFGLV---KKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 530 QAIEIFTMLEKNGVTPNQVTFLAMLSA 556
+A + + + GV P++ T+ M++
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMING 701
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 202/467 (43%), Gaps = 35/467 (7%)
Query: 3 HRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQ 62
+ ++VT+ TLIS++ G + +AF+L N M P YT++ ++ + +
Sbjct: 267 YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGF 118
+ ++RSGL D SL+ M + ++ + VF D+ R DLV ++ M+S F
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLL-MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKFGAETD 175
+ G+ F+ + E GL PDN + L++ G + M + + G D
Sbjct: 386 TRSGNLDKALMYFNSVKEA-GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFK 231
V + ++ K + K+F+ M E+ D++ + +I G+ + A+ F+
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFG 291
M ++R++ D ++ L ++ D++T ++ M+ S+L+ + G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 292 GLRDAEKLFRRIDDKDI----VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQ--IQG 345
L +A +++ + K+I + NSMI + + G S L+++ + I
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE-SFLEKMISEGFVPDCISY 623
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-----NALVHMYSECGQIGDAF 400
TLI +N S + LV K LV N+++H + Q+ +A
Sbjct: 624 NTLIYGFVREENMS------KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 401 KAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT 443
++ + D S+++ +I + +EA + EML G +
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 182/427 (42%), Gaps = 38/427 (8%)
Query: 279 VASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQE 334
V +L+ Y LR+A + F + K I A N++I + ++G + + QE
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGW-VELAWGVYQE 225
Query: 335 LHRTTSLQIQGATL-IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSEC 393
+ R+ + I TL I + CK+ G + S V + V + N L+ YS
Sbjct: 226 ISRS-GVGINVYTLNIMVNALCKDGKMEKVGTFL-SQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 394 GQIGDAFKAFVDIVCKDDS----SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSL 449
G + +AF+ + K S +++++I ++G A E+ EML G++ S +
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 450 -PLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF---- 504
L + +C + + K F + D+ SS++ ++ + G+++ + F
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVV-PDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIE 564
+A + P+ VIY +I GY G A+ + + + G + VT+ +L +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 565 DTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES------AWRTL 618
+ LF M + + P+S + L+D + + G L+ A ++ QK + + TL
Sbjct: 463 EADKLFNEMTER-ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 619 LSACRNHNNTKIGEKSAKKMI-------ELNPSDHASYILLSNIYIEEGKWEEARDCREK 671
L K+G+ K I E+ P+ SY +L N +G EA ++
Sbjct: 522 LDGF-----GKVGDIDTAKEIWADMVSKEILPTP-ISYSILVNALCSKGHLAEAFRVWDE 575
Query: 672 MAKTGVK 678
M +K
Sbjct: 576 MISKNIK 582
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 125/317 (39%), Gaps = 48/317 (15%)
Query: 7 VTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGV 66
V +T LI + R G + A L N+M + T++ +L + ++
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQVG 122
+ L D + + L+ + G NL++A +F + E+ D+V +N ++ GF +VG
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLG-NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 123 DFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCST--LGEVMQIHGLASKFGAETDAVVSS 180
D + ++++M E L + + CS L E ++ + ++ +
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 181 AMVDLYAKCGDVSSCRKIFDSM------------------------------------EE 204
+M+ Y + G+ S + M EE
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 205 K-----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLN 259
+ D F ++SI+ G+ N+ +EA + M ++ V PD+ + + V ++L
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709
Query: 260 TGVQVHGQMIKNGHQND 276
++H +M++ G D
Sbjct: 710 EAFRIHDEMLQRGFSPD 726
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 136/707 (19%), Positives = 281/707 (39%), Gaps = 113/707 (15%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N+V + LI + V +A + D+ D +P+ T+ L+ + +GL++
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE----RDLVAWNVMISGFAQ 120
++ + A SSLV G + +A + +++ +L +N +I +
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRG-KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
F + LF M ++ GL+P++ T+ S
Sbjct: 380 GRKFHEAELLFDRMGKI-GLRPNDVTY--------------------------------S 406
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
++D++ + G + + M + + ++S+I+G+ A F +M +
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+++P +S + +N ++++ +M G + + LL+ G +RDA
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 297 EKLFRRIDDKDI----VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAIL 352
KLF + + ++ V +N MI + + G S++ + L+E+
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD-MSKAFEFLKEM----------------- 568
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK--- 409
+ + T L+H GQ +A K FVD + K
Sbjct: 569 -------------------TEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNC 608
Query: 410 --DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSC----SQLLAIN 463
++ ++ ++ + + G EAL +C+EM+ G+ + I + L
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 464 VGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK----PNEVIYNAMI 519
+ K+ H G D + +S+ID +K G +++ ++D + PNEV Y A+I
Sbjct: 669 LLKEMH----DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 520 CGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGY-IEDTLNLFTLMLYKYK 578
G G +A + + ++ PNQVT+ L + ++ + L +L
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL--KG 782
Query: 579 IKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSES---AWRTLLSACRNHNNTKIGE 632
+ + Y+ L+ + R GR+EEA +++ + DG + T+++ N+ K
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 633 KSAKKMIE--LNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGV 677
+ M E + P D +Y L + G+ +A + R +M + G+
Sbjct: 843 ELWNSMTEKGIRP-DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 155/729 (21%), Positives = 284/729 (38%), Gaps = 123/729 (16%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRV-MDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
+ LI ++R+ V +F M + P T S LL + + +++ +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL--------------LERDLVAWNV 113
V G+ D VY+Y+ +L C DL + ++V +NV
Sbjct: 219 VSVGIRPD-------VYIYTGVIRSL----CELKDLSRAKEMIAHMEATGCDVNIVPYNV 267
Query: 114 MISGFAQVGDFCMVQRLFSEMWEVEG---------LKPDNRTFVSLL-KCCST----LGE 159
+I G C Q++ WE G LKPD T+ +L+ C +G
Sbjct: 268 LIDGL------CKKQKV----WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317
Query: 160 VMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSC----RKIFDSMEEKDNFVWSSIIS 215
M L +F AV S++V+ K G + +++ D + FV++++I
Sbjct: 318 EMMDEMLCLRFSPSEAAV--SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 216 GYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQN 275
+ EA F M K ++P+ S + L+T + G+M+ G +
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435
Query: 276 DCFVASVLLTLYANFGGLRDAEKLFRRIDDKD----IVAWNSMILAHAQLGQGSSRSMQL 331
+ + L+ + FG + AE + +K +V + S++ + G+ +++++L
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK-INKALRL 494
Query: 332 LQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYS 391
E+ G+ I S + TL+
Sbjct: 495 YHEM---------------------------TGKGIAP----SIYTFTTLLSGLF----- 518
Query: 392 ECGQIGDAFKAFVDI----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSY 447
G I DA K F ++ V + +++ +I Y + G S+A E KEM +GI +Y
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 448 SL-PLCISSCSQLLAINVGKQFHVFAIKSG---YNHDVYVGSSIIDMYAKCGHMEDSKKV 503
S PL C L + V + G N Y G ++ + + G +E++ V
Sbjct: 579 SYRPLIHGLC--LTGQASEAKVFVDGLHKGNCELNEICYTG--LLHGFCREGKLEEALSV 634
Query: 504 FDAQVKP----NEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSH 559
V+ + V Y +I G H K + + G+ P+ V + +M+ A S
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 560 AGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK-DGSESAWRTL 618
G ++ ++ LM+ + + P Y+ +++ +AG + EA + K S +
Sbjct: 695 TGDFKEAFGIWDLMINEGCV-PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753
Query: 619 LSACRNHNNTKIGEKSAKKMIELNPS-------DHASYILLSNIYIEEGKWEEARDCREK 671
C TK GE +K +EL+ + + A+Y +L + +G+ EEA + +
Sbjct: 754 TYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 672 MAKTGVKKD 680
M GV D
Sbjct: 813 MIGDGVSPD 821
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 114/583 (19%), Positives = 229/583 (39%), Gaps = 92/583 (15%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N+ + LI S + +A LF+ M + RPN+ T+S+L+ + L
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL--------------LERDLVA 110
G +V +GL+ + +SL+ NG C F D+ LE +V
Sbjct: 426 GEMVDTGLKLSVYPYNSLI-----NGH------CKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 111 WNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLA 167
+ ++ G+ G RL+ EM +G+ P TF +LL G + +++
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTG-KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 168 SKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRG 223
+++ + + V + M++ Y + GD+S + M EK D + + +I G + +
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 224 EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL 283
EA F + K + ++ + L L + V +M++ G D VL
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 284 LTLYANFGGLRDAEK-----LFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQE 334
+ G L+ ++ L + + D+ D V + SMI A ++ G +E
Sbjct: 654 ID-----GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD--------FKE 700
Query: 335 LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECG 394
L I + +++ I+ L V+ ++ + + + S
Sbjct: 701 AFGIWDLMINEGCV---------PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751
Query: 395 QIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC-- 452
Q+ + F+DI+ K + + + + K +LA T+ C
Sbjct: 752 QV--TYGCFLDILTKGEVDMQKAVELHNA---------ILKGLLANTATYNMLIRGFCRQ 800
Query: 453 --ISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ--- 507
I S+L+ +G G + D +++I+ + ++ + +++++
Sbjct: 801 GRIEEASELITRMIG---------DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 508 -VKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVT 549
++P+ V YN +I G G+ +A E+ + + G+ PN T
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 115/626 (18%), Positives = 247/626 (39%), Gaps = 62/626 (9%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V T+ LI R+ + K + L DMR PNE T++ L+ + + Q+
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
++ GL + V +N +I G G+F
Sbjct: 362 NEMLSFGLSPNH--------------------------------VTFNALIDGHISEGNF 389
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAVVSSA 181
++F M E +GL P ++ LL E G + G + +
Sbjct: 390 KEALKMFY-MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 182 MVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
M+D K G + + + M + D +S++I+G+ R + A + +
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
+ P+ + S+ + C + L ++++ MI GH D F +VL+T G + +AE
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 298 KLFRRIDDKDI----VAWNSMILAHAQLGQGSSRSMQLLQELHRT---TSLQIQGATLIA 350
+ R + I V+++ +I + G+G ++ + E+ + + G+ L
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEG-LKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK- 409
+ K + + +H++ + T++ N L+ + G + A F ++V +
Sbjct: 628 LCKGGHLREAEKFLKSLHAV----PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 410 ---DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC-ISSCSQLLAINVG 465
D +++S+I + G A+ KE A G + + C + + G
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743
Query: 466 KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICG 521
F G+ D+ +++ID Y++ G +E + + + PN YN ++ G
Sbjct: 744 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 803
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKP 581
Y+ + ++ + NG+ P+++T +++ + +E L + + + ++
Sbjct: 804 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR-GVEV 862
Query: 582 ESEHYSCLVDAYGRAGRLEEAYQIVQ 607
+ ++ L+ G + A+ +V+
Sbjct: 863 DRYTFNMLISKCCANGEINWAFDLVK 888
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 156/729 (21%), Positives = 295/729 (40%), Gaps = 72/729 (9%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
M H N VT+ TLI+ G V A QL N+M PN TF+ L+ + +
Sbjct: 333 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERD-----LVAWNVMI 115
L++ ++ GL + + L+ N D F+ ++R+ + + MI
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE--FDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 116 SGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GA 172
G + G L +EM + +G+ PD T+ +L+ +G + + G
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSM----EEKDNFVWSSIISGYTVNNRGEEAVH 228
+ ++ S ++ + G + +I+++M +D+F ++ +++ + EA
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F + M + P+ + + V +M K GH F LL
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629
Query: 289 NFGGLRDAEKLFRRID----DKDIVAWNSMILAHAQLGQ--------GSSRSMQLLQELH 336
G LR+AEK + + D V +N+++ A + G G +L + +
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689
Query: 337 RTTSLQI----QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSE 392
TSL +G T+IAIL + K G + + VM + V +
Sbjct: 690 TYTSLISGLCRKGKTVIAILFA---KEAEARGNVLPNKVMYT----------CFVDGMFK 736
Query: 393 CGQ--IGDAFKAFVDIV--CKDDSSWSSIIGTYKQNGMESEALELCKEMLAE--GITFTS 446
GQ G F+ +D + D + +++I Y + G + +L EM + G T+
Sbjct: 737 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 796
Query: 447 YSLPLCISSCSQLLAINVGKQFHVF--AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
Y++ L S + +V F ++ I +G D S++ + +E K+
Sbjct: 797 YNILLHGYSKRK----DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 852
Query: 505 DA----QVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHA 560
A V+ + +N +I +G+ A ++ ++ G++ ++ T AM+S +
Sbjct: 853 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 912
Query: 561 GYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAY---------QIVQKDGS 611
+++ + M K I PES Y L++ R G ++ A+ +I + +
Sbjct: 913 HRFQESRMVLHEM-SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 612 ESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREK 671
ESA L+ C + + + KM +L P+ AS+ L ++ + G EA + R
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFMLKM-KLVPTI-ASFTTLMHLCCKNGNVIEALELRVV 1029
Query: 672 MAKTGVKKD 680
M+ G+K D
Sbjct: 1030 MSNCGLKLD 1038
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/451 (18%), Positives = 190/451 (42%), Gaps = 69/451 (15%)
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE--KDNFVWSSIISGYTVNNRGEEAVH 228
G D++ ++ LY V +C I S+ + +D VWS
Sbjct: 177 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS----------------- 219
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F K+M K+++ PD + + + +M K+G+ + +L Y
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 289 NFGGLRDAEKLFRRID----DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQ 344
G + A +L + D D+ +N L+ +L R+ + +
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYN-----------------MLIHDLCRSNRIA-K 321
Query: 345 GATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFV 404
G L+ ++ R IH + V++ N L++ +S G++ A +
Sbjct: 322 GYLLLRDMRK----------RMIHP----NEVTY-----NTLINGFSNEGKVLIASQLLN 362
Query: 405 DIVC----KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLL 460
+++ + +++++I + G EAL++ M A+G+T + S + + +
Sbjct: 363 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 422
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK----PNEVIYN 516
++ + F++ ++G + +ID K G ++++ + + K P+ V Y+
Sbjct: 423 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 482
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
A+I G+ G+ K A EI + + G++PN + + ++ C G +++ + ++ M+ +
Sbjct: 483 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 542
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ 607
+ + ++ LV + +AG++ EA + ++
Sbjct: 543 GHTR-DHFTFNVLVTSLCKAGKVAEAEEFMR 572
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/547 (19%), Positives = 217/547 (39%), Gaps = 91/547 (16%)
Query: 150 LLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKD--- 206
++ S + E M HG+ + + M+D K GD+ KI+ M+ ++
Sbjct: 218 MMNKASAVYETMIEHGIMPT------VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEF 271
Query: 207 -NFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
++ +I+G++ N + EEA F DM + + + + + + V
Sbjct: 272 SEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVT 331
Query: 266 GQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGS 325
+M+ G ++ + +FG + DA +L + D+V++N+++ + ++G+
Sbjct: 332 DEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFV 391
Query: 326 SRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-N 384
S+ DL AG HP++V N
Sbjct: 392 EASLLF---------------------------DDLRAGD-----------IHPSIVTYN 413
Query: 385 ALVHMYSECGQIGDAFK----AFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAE 440
L+ E G + A + ++ D ++++++ + +NG S A E+ EML +
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 441 GITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH---DVYVGSSIIDMYAKCGHM 497
GI Y+ + +L + K F + +H D+ + + ID K G++
Sbjct: 474 GIKPDGYAY--TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 498 ----EDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAM 553
E +K+F + P+ V Y +I GY +GQ K A ++ + + + P+ +T+ +
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 554 LSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES 613
+ + AG +E T M K ++P ++ L+ +AG ++EAY+ + K E
Sbjct: 592 IYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Query: 614 AWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMA 673
P + SY +L + + KWEE ++M
Sbjct: 651 I----------------------------PPNKYSYTMLISKNCDFEKWEEVVKLYKEML 682
Query: 674 KTGVKKD 680
++ D
Sbjct: 683 DKEIEPD 689
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/468 (19%), Positives = 193/468 (41%), Gaps = 30/468 (6%)
Query: 1 MPHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVG 60
MP V+T+ T++ S +AG + + +++ +M+ + +E T+++L+ +
Sbjct: 235 MP--TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 61 LQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLV----AWNVMIS 116
+ HG + RSG ++ + L+ Y G DA V ++L + +N+ I
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL-FDDAWGVTDEMLNAGIYPTTSTYNIYIC 351
Query: 117 GFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGA---E 173
G + L S M PD ++ +L+ +G+ ++ L A
Sbjct: 352 ALCDFGRIDDARELLSSM-----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 174 TDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHF 229
V + ++D + G++ +++ + M + D +++++ G+ N A
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ-NDCFVASVLLTLYA 288
+ +M ++ +KPD + ++ + + D + ++H +M+ H D + +V +
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 526
Query: 289 NFGGLRDA----EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQ 344
G L A K+FR D V + ++I + + GQ + L E+ R L
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ-FKMARNLYDEMLR-KRLYPS 584
Query: 345 GATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFV 404
T ++ L Q + + K V + NAL++ + G I +A++
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 405 DI----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYS 448
+ + + S++ +I E ++L KEML + I Y+
Sbjct: 645 KMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 152/377 (40%), Gaps = 60/377 (15%)
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD 410
+LK ++ + ++ +++ + + N ++ + G + K ++++ ++
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 411 ----DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSL-PLCISSCSQLLAINVG 465
+ +++ +I + +NG EA +M G T YS PL C Q L +
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 466 KQFHVFAIKSGYNHDVYVGSSIIDMY--AKC--GHMEDSKKVFDAQVKPNEVIYNAMICG 521
N +Y +S ++Y A C G ++D++++ + P+ V YN ++ G
Sbjct: 329 G-----VTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHG 383
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKP 581
Y G+ +A +F L + P+ VT+ ++ +G +E L M + I P
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL-IFP 442
Query: 582 ESEHYSCLVDAYGRAGRLEEAYQI--------VQKDG---------------SESAWR-- 616
+ Y+ LV + + G L A ++ ++ DG S+ A+R
Sbjct: 443 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH 502
Query: 617 ------------------TLLSACRNHNNTKIGEKSAKKM-IELNPSDHASYILLSNIYI 657
+ C+ N K E K + L P DH +Y + Y+
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVP-DHVTYTTVIRGYL 561
Query: 658 EEGKWEEARDCREKMAK 674
E G+++ AR+ ++M +
Sbjct: 562 ENGQFKMARNLYDEMLR 578
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 209/464 (45%), Gaps = 38/464 (8%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFS-VLLRACATPALWNVGLQI 63
N V + TLI S + V +A QL +M +M P+ TF+ V+L C + +
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNG----SNLRDACCVFHDLLERDLVAWNVMISGFA 119
+ +L+R FA + Y Y NG + A +F+ + + ++V +N +I GF
Sbjct: 311 NRMLIRG------FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQI-HGLASKFGAETD 175
G + + S+M G+ PD T+ SL+ +G +++ H + +K G + +
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK-GCKPN 423
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEE---KDNFV-WSSIISGYTVNNRGEEAVHFFK 231
+ +VD + K G + + + M K N V ++ +IS + +R EAV F+
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFG 291
+M ++ KPD + +S + E++++ + + MI G + + L+ + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 292 GLRDAEKLFRRI----DDKDIVAWNSMILAHAQLGQ-GSSRSM--QLLQELHRTTSLQIQ 344
+++A KL + D + +NS+I + G+ +RS+ ++L++ H +++
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 345 GATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAF 403
I I C++ A +V++ S P +V N+L++ G+I D F
Sbjct: 604 ----ILINGLCRSGMVEEAVEFQKEMVLRGST--PDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 404 VDI----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT 443
+ + D ++++++ + G +A L E + +G
Sbjct: 658 RKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 195/465 (41%), Gaps = 51/465 (10%)
Query: 206 DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH 265
++ ++ ++I + NR EA+ ++M PD + + + + +N ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 266 GQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMI---LAHAQLG 322
+M+ G D L+ G + A+ LF RI +IV +N++I + H +L
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 323 QGSS------RSMQLLQELHRTTSLQIQG-------ATLIAILKSCKNKSDLPAGRQIHS 369
+ S ++ ++ SL I G + +L +NK P
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSL-IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 370 LV------------------MKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIV--- 407
LV M + P VG N L+ + + +I +A + F ++
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 408 CKDDS-SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK 466
CK D +++S+I + AL L ++M++EG+ + + I++ + I +
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 467 QFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK----PNEVIYNAMICGY 522
+ + G D +S+I + G ++ ++ +F+ ++ P+ + N +I G
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 523 AHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPE 582
G ++A+E + G TP+ VTF ++++ AG IED L +F L I P+
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR-KLQAEGIPPD 668
Query: 583 SEHYSCLVDAYGRAGRLEEAYQIVQ---KDG---SESAWRTLLSA 621
+ ++ L+ + G + +A ++ +DG + W LL +
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 110/580 (18%), Positives = 225/580 (38%), Gaps = 111/580 (19%)
Query: 110 AWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASK 169
+ V+I G+F + RL +M + EG+ F+S+++ G
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKD-EGIVFKESLFISIMRDYDKAG----------- 160
Query: 170 FGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHF 229
F +T L + +V SC F S N V ++SG N + A +
Sbjct: 161 FPGQT--------TRLMLEMRNVYSCEPTFKSY----NVVLEILVSG----NCHKVAANV 204
Query: 230 FKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
F DM +++ P ++A + ++++ + + M K+G + + L+ +
Sbjct: 205 FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSK 264
Query: 290 FGGLRDA----EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG 345
+ +A E++F D +N +IL + + + + + + L R
Sbjct: 265 CNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR--GFAPDD 322
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVD 405
T ++ + A + + + K + ++ N L+H + G++ DA D
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 406 IV-----CKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLL 460
+V D +++S+I Y + G+ ALE+ +M +G C
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG--------------CKP-- 422
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ----VKPNEVIYN 516
+VY + ++D + K G ++++ V + +KPN V +N
Sbjct: 423 -------------------NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
+I + + +A+EIF + + G P+ TF +++S I+ L L M+ +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWRTLLSACRNHNNTKIGEKSAK 636
+ + Y+ L++A+ R G ++EA ++V +
Sbjct: 524 -GVVANTVTYNTLINAFLRRGEIKEARKLVNE---------------------------- 554
Query: 637 KMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTG 676
+ + +P D +Y L G+ ++AR EKM + G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 183/416 (43%), Gaps = 42/416 (10%)
Query: 196 RKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEI 255
R++ DS + + + ++ G E++ K+ + +KP+ + ++ + A V+
Sbjct: 213 RRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 256 EDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAW 311
D + V M K+G + ++L+ L G + DAEKLF + ++ D+ +
Sbjct: 273 RDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV 371
S+I + + G R+ L EL L T A++ ++ A + + +
Sbjct: 333 TSLISWNCRKGN-MKRAFLLFDELTE-KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 372 MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEAL 431
V+ +V N L+ Y G + +A S I +Q G +++
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEA---------------SMIYDVMEQKGFQADV- 434
Query: 432 ELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMY 491
FT ++ C ++L + KQ+ ++ G +++ID+Y
Sbjct: 435 ------------FTCNTIASCF---NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 492 AKCGHMEDSKKVF----DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQ 547
K G++E++K++F V+PN + YN MI Y G+ K+A ++ +E NG+ P+
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDS 539
Query: 548 VTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAY 603
T+ +++ A +++ + LF+ M K + S Y+ ++ +AG+ +EA+
Sbjct: 540 YTYTSLIHGECIADNVDEAMRLFSEMGLK-GLDQNSVTYTVMISGLSKAGKSDEAF 594
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/532 (18%), Positives = 211/532 (39%), Gaps = 93/532 (17%)
Query: 46 VLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACC-VFHDLL 104
++ R ++ GL++ +V+ GL D+ S +V++ + D C +F ++
Sbjct: 159 LVFRVYVDNGMFEEGLRVFDYMVKKGLSIDE--RSCIVFLVAAKKRRRIDLCLEIFRRMV 216
Query: 105 ER----DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV 160
+ + + +++ G + G+ ++L E + V+G+KP+ T+ +++ +
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKE-FSVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 161 MQIHGL---ASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSI 213
+ G+ K G + V + +++L K G +S K+FD M E+ D V++S+
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 214 ISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGH 273
IS + A F ++ ++ + P + + + ++ ++ + +M G
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 274 QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSM 329
V + L+ Y G + +A ++ ++ K D+ N+
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT---------------- 439
Query: 330 QLLQELHRTTSLQIQGATLIAILKSCKNK-SDLPAGRQIHSLVMKSSVSHPTLVGNALVH 388
+ SC N+ +Q +M+ V T+ L+
Sbjct: 440 ----------------------IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 389 MYSECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
+Y + G + +A + FV++ K + +++ +I Y + G EA +L M A G+
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 445 TSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF 504
SY+ I + +A NV + +F+ E K
Sbjct: 538 DSYTYTSLIH--GECIADNVDEAMRLFS-------------------------EMGLKGL 570
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSA 556
D N V Y MI G + G++ +A ++ +++ G T + + A++ +
Sbjct: 571 DQ----NSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V +T+LIS + R G++ +AF LF+++ P+ YT+ L+ +
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER-----DLVAWNVMISGFA 119
+ G+ + ++L+ Y G + D + +D++E+ D+ N + S F
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKG--MVDEASMIYDVMEQKGFQADVFTCNTIASCFN 445
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGL---ASKFGAETDA 176
++ + ++ M E G+K ++ +L+ G V + L S G + +A
Sbjct: 446 RLKRYDEAKQWLFRMME-GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKD 232
+ + M+ Y K G + RK+ +ME + D++ ++S+I G + + +EA+ F +
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 233 M 233
M
Sbjct: 565 M 565
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 142/346 (41%), Gaps = 53/346 (15%)
Query: 386 LVHMYSECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLAEG 441
+ +Y + G + + F +V K D+ S + K+ LE+ + M+ G
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 442 ITFTSYSLPLCISSCSQLLAINVGKQF-HVFAIKSGYNHDVYVGSSIIDMYAK------- 493
+ T YSL + + + + K+ F++K G + Y ++II+ Y K
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVK-GIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 494 ----------------------------CGHMEDSKKVFDAQ----VKPNEVIYNAMICG 521
G M D++K+FD ++ + +Y ++I
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKP 581
G K+A +F L + G++P+ T+ A++ G + L M K +
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK-GVNI 397
Query: 582 ESEHYSCLVDAYGRAGRLEEA---YQIVQKDGSESAWRTLLSACRNHNNTKIGEKSAK-- 636
++ L+D Y R G ++EA Y ++++ G ++ T + N K +++ +
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457
Query: 637 -KMIELNPS-DHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
+M+E SY L ++Y +EG EEA+ +M+ GV+ +
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/435 (19%), Positives = 167/435 (38%), Gaps = 80/435 (18%)
Query: 261 GVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK--DIVAWNSMILAH 318
G++V M+K G D V L + ++FRR+ D I ++ I+
Sbjct: 173 GLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVE 232
Query: 319 AQLGQGS-SRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVS 377
+G +S +L++E ++ + T I+ + + D + ++ K V
Sbjct: 233 GLCRRGEVEKSKKLIKEFS-VKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
Query: 378 HPTLVGNALVHMYSECGQIGDAFKAFVDI----VCKDDSSWSSIIGTYKQNGMESEALEL 433
+ + L+ + + G++ DA K F ++ + D ++S+I + G A L
Sbjct: 292 YNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLL 351
Query: 434 CKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAK 493
E+ +G++ +SY+ ++ID K
Sbjct: 352 FDELTEKGLSPSSYTY-----------------------------------GALIDGVCK 376
Query: 494 CGHMEDSKKVFDAQ----VKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVT 549
G M ++ + + V +V++N +I GY G +A I+ ++E+ G + T
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 550 FLAMLSACSH-AGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
+ S + Y E LF +M + +K + Y+ L+D Y + G +EEA ++ +
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMM--EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
Query: 609 DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDC 668
S+ + +Y ++ Y ++GK +EAR
Sbjct: 495 MSSKGVQ----------------------------PNAITYNVMIYAYCKQGKIKEARKL 526
Query: 669 REKMAKTGVKKDPGS 683
R M G+ DP S
Sbjct: 527 RANMEANGM--DPDS 539
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+ V++T LI + + G+V +A +LF +M +PN T++V++ A ++
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFAQ 120
+ +G++ D + +SL++ N+ +A +F ++ L+++ V + VMISG ++
Sbjct: 528 ANMEANGMDPDSYTYTSLIHG-ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLL 151
G L+ EM +G DN+ + +L+
Sbjct: 587 AGKSDEAFGLYDEMKR-KGYTIDNKVYTALI 616
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/529 (20%), Positives = 228/529 (43%), Gaps = 62/529 (11%)
Query: 95 DACCVFHDLLER----DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSL 150
DA +F D+++ +V +N ++S A++ F +V L +M + G+ D T+
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSIF 124
Query: 151 LKC-C--STLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE--- 204
+ C C S L + + K G E D V S++++ Y +S + D M E
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 205 -KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
D F ++++I G ++N+ EAV M ++ +PD + + + D++ +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHA 319
+ +M + + + + ++ + + A LF ++ K ++V +NS+I
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHP 379
G+ S S L L + + + T A++ + + L ++H +++ S+
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNV--VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 380 TLVGNALVHMYSECGQIGDAFKAFVDIVCKD----DSSWSSIIGTYKQNGMESEALELCK 435
T+ N L++ + ++ +A + F +V KD +++++I + + + +EL +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 436 EMLAEG-----ITFT-----------------------SYSLPLCISSCSQLL------- 460
EM G +T+T S +P I + S LL
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNAMI 519
++ + KS ++++ +++I+ K G + ++ +F +KP+ V YN MI
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMI 542
Query: 520 CGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSA----CSHAGYIE 564
G ++A ++F ++++G PN T+ ++ A C A E
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 162/351 (46%), Gaps = 32/351 (9%)
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV 407
L A+ K K + + G Q+ +L +SH + ++ + Q+ A ++
Sbjct: 90 LSAVAKMNKFELVISLGEQMQTL----GISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 408 C----KDDSSWSSIIGTYKQNGMESEALELCKEMLAEG-----ITFTSYSLPLCI-SSCS 457
D + SS++ Y + S+A+ L +M+ G TFT+ L + + S
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 458 QLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD----AQVKPNEV 513
+ +A+ V + ++ G D+ ++++ K G ++ + + + A++K N V
Sbjct: 206 EAVAL-VDQM-----VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 514 IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
I+N +I + + A+++FT +E G+ PN VT+ ++++ + G D L + M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 574 LYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI----VQK--DGSESAWRTLLSACRNHNN 627
L K KI P ++ L+DA+ + G+L EA ++ +Q+ D + L++ HN
Sbjct: 320 LEK-KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 628 TKIGEKSAKKMIELN-PSDHASYILLSNIYIEEGKWEEARDCREKMAKTGV 677
++ K M+ + + +Y L N + + + E+ + +M++ G+
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 156/401 (38%), Gaps = 61/401 (15%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
NVV + T+I S + V A LF +M RPN T++ L+ W+
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS------ 310
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQ 120
DA + ++LE+ ++V +N +I F +
Sbjct: 311 ------------------------------DASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK--CC-STLGEVMQIHGLASKFGAETDAV 177
G ++L EM + + PD T+ L+ C + L E Q+ +
Sbjct: 341 EGKLVEAEKLHEEMIQ-RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ +++ + KC V ++F M ++ + +++II G+ + A FK M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
RV D S L L+T + + + K+ + + F+ + ++ G +
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 294 RDAEKLFRRIDDK-DIVAWNSMILAHAQLGQGSSRSMQ----LLQELHRTTSLQIQGA-- 346
+A LF + K D+V +N+MI G S R +Q L +++ +L G
Sbjct: 520 GEAWDLFCSLSIKPDVVTYNTMI-----SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Query: 347 TLI-AILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNAL 386
TLI A L+ C + +++ S S +LV N L
Sbjct: 575 TLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 136/313 (43%), Gaps = 32/313 (10%)
Query: 391 SECGQIGDAFKAFVDIVCKDDSSWSSII-------GTYKQNGMESEALELCKEMLAEGIT 443
S+ ++ DA F D+V + SI+ K N E + L ++M GI+
Sbjct: 59 SDIIKVDDAVDLFGDMV--KSRPFPSIVEFNKLLSAVAKMNKFEL-VISLGEQMQTLGIS 115
Query: 444 FTSYSLPL---CISSCSQL-LAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMED 499
Y+ + C SQL LA+ V + +K GY D+ SS+++ Y + D
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKM----MKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 500 SKKVFDAQV----KPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLS 555
+ + D V KP+ + +I G H +A +A+ + + + G P+ VT+ +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 556 ACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES-- 613
G I+ LNL M +IK ++ ++D+ + +E A + + ++
Sbjct: 232 GLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 614 ----AWRTLLSACRNHNNTKIGEKSAKKMIE--LNPSDHASYILLSNIYIEEGKWEEARD 667
+ +L++ N+ + M+E +NP + ++ L + + +EGK EA
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP-NVVTFNALIDAFFKEGKLVEAEK 349
Query: 668 CREKMAKTGVKKD 680
E+M + + D
Sbjct: 350 LHEEMIQRSIDPD 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/521 (16%), Positives = 187/521 (35%), Gaps = 115/521 (22%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P ++V + L+S+ + L M+ + + YT+S+ + + ++ L
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER--------------- 106
+ +++ G E D SSL+ Y ++ + DA + ++E
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHS-KRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 107 ------------------------DLVAWNVMISGFAQVGDFCMVQRLFSEM-------- 134
DLV + +++G + GD + L ++M
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 135 --------------------------WEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLAS 168
E +G++P+ T+ SL+ C G L S
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 169 KF---GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNN 221
+ V +A++D + K G + K+ + M ++ D ++ +I+G+ ++N
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 222 RGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVAS 281
R +EA FK M + P+ ++ + + + + GV++ +M + G
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG--------- 428
Query: 282 VLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSL 341
L N V + ++I Q G S M Q +
Sbjct: 429 ----LVGN------------------TVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466
Query: 342 QIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFK 401
I ++ +L + L I + KS + + N ++ + G++G+A+
Sbjct: 467 DIMTYSI--LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524
Query: 402 AFVDIVCKDD-SSWSSIIGTYKQNGMESEALELCKEMLAEG 441
F + K D +++++I + EA +L ++M +G
Sbjct: 525 LFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/547 (19%), Positives = 233/547 (42%), Gaps = 63/547 (11%)
Query: 111 WNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC-C--STLGEVMQIHGLA 167
+N ++S A++ F +V L +M + G+ + T+ L+ C C S + + + G
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 168 SKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRG 223
K G E V S++++ Y +S + D M E D ++++I G ++N+
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 224 EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL 283
EAV M ++ +P+ + + D++ + +M + D + + +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 284 LTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTT 339
+ + + DA LF+ ++ K ++V ++S+I G+ S S L + +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 340 SLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDA 399
+ + T A++ + + ++H ++K S+ N+L++ + ++ A
Sbjct: 252 NPNL--VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 400 FKAFVDIVCKD----DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS 455
+ F +V KD +++++I + ++ + EL +EM G+
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL------------- 356
Query: 456 CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQV----KPN 511
VG + G HD G ++++KVF V P+
Sbjct: 357 --------VGDTVTYTTLIQGLFHD--------------GDCDNAQKVFKQMVSDGVPPD 394
Query: 512 EVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFT 571
+ Y+ ++ G ++G+ ++A+E+F ++K+ + + + M+ AG ++D +LF
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 572 LMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHNNT 628
+ K +KP Y+ ++ L+EAY +++K DG T + R H
Sbjct: 455 SLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH--L 511
Query: 629 KIGEKSA 635
+ G+K+A
Sbjct: 512 RDGDKAA 518
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 117/575 (20%), Positives = 223/575 (38%), Gaps = 91/575 (15%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P ++ + L+S+ + L M+ + N YT+++L+ + ++ L
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISG 117
+ G +++ G E SSL+ Y +G + DA + ++E D + + +I G
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYC-HGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGA---ET 174
L M + G +P+ T+ ++ G++ L +K A E
Sbjct: 125 LFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFF 230
D V+ + ++D K V +F ME K + +SS+IS R +A
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
DM ++++ P+ ++ + A V+ ++H MIK D F + L+ +
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 291 GGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA 346
L A+++F + K D+ +N++I + S+ ++ EL R S
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK-----SKRVEDGTELFREMS------ 352
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFV-D 405
H ++ +V++ TL+ L H +C FK V D
Sbjct: 353 ---------------------HRGLVGDTVTYTTLI-QGLFH-DGDCDNAQKVFKQMVSD 389
Query: 406 IVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG 465
V D ++S ++ NG +ALE+ M
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ--------------------------- 422
Query: 466 KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA----QVKPNEVIYNAMICG 521
KS D+Y+ +++I+ K G ++D +F + VKPN V YN MI G
Sbjct: 423 --------KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSA 556
++A + ++++G P+ T+ ++ A
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 158/352 (44%), Gaps = 28/352 (7%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+VV + T+I S + V A LF +M RPN T+S L+ + W+ Q+
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQ 120
++ + + ++L+ + G +A + D+++R D+ +N +I+G
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGK-FVEAEKLHDDMIKRSIDPDIFTYNSLING--- 299
Query: 121 VGDFCMVQRL--FSEMWEVEGLK---PDNRTFVSLLK--CCST-LGEVMQIHGLASKFGA 172
FCM RL +M+E K PD T+ +L+K C S + + ++ S G
Sbjct: 300 ---FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 173 ETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVH 228
D V + ++ GD + +K+F M D +S ++ G N + E+A+
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYA 288
F M K +K D ++ ++ + + ++ G + + G + + + +++
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 289 NFGGLRDAEKLFRRIDD----KDIVAWNSMILAHAQLGQGSSRSMQLLQELH 336
+ L++A L +++ + D +N++I AH + G ++ S +L++E+
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA-SAELIREMR 527
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 153/360 (42%), Gaps = 64/360 (17%)
Query: 378 HPTLVG-NALVHMYSECGQIGDAFKAFVDIVCK-----DDSSWSSIIGTYKQNGMESEAL 431
P++V ++L++ Y +I DA A VD + + D +++++I + SEA+
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAV-ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 432 ELCKEMLAEG-----ITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSS 486
L M+ G +T+ LC L A N+ + I++ DV + ++
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL-AFNLLNKMEAAKIEA----DVVIFNT 190
Query: 487 IIDMYAKCGHMEDSKKVFDAQ----VKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG 542
IID K H++D+ +F ++PN V Y+++I +G+ A ++ + + +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 543 VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA 602
+ PN VTF A++ A G + L M+ K I P+ Y+ L++ + RL++A
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMI-KRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 603 YQIVQ---------------------------KDGSE--------------SAWRTLLSA 621
Q+ + +DG+E + TL+
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 622 CRNHNNTKIGEKSAKKMIELN-PSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
+ + +K K+M+ P D +Y +L + GK E+A + + M K+ +K D
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 116/622 (18%), Positives = 273/622 (43%), Gaps = 65/622 (10%)
Query: 105 ERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIH 164
E +++ +N+M+ + + VQ L+ EM +G+KP N T+ +L+ S G +++H
Sbjct: 184 ELNVIHYNIMLRILGKACKWRYVQSLWDEMIR-KGIKPINSTYGTLIDVYSKGG--LKVH 240
Query: 165 GLA-----SKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDN----------FV 209
L SK G + D V + ++ +Y K + + F +N +
Sbjct: 241 ALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYT 300
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLR------ACVEIEDLNTGVQ 263
++++I Y + + +EA FK M ++ + P ++ + E+ L ++
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD----KDIVAWNSMILAHA 319
+H D ++L++L+ + A F+ + D D V++ +++ A +
Sbjct: 361 LHCA-------PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFS 413
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAG----RQIHSLVMKSS 375
+ + L+ E+ +++I T A+ + L ++ H SS
Sbjct: 414 -IRHMVEEAEGLIAEMD-DDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSS 471
Query: 376 VSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS-----SWSSIIGTYKQNGMESEA 430
+ +A + Y E G + +A + F I C++ + ++ +I Y + +A
Sbjct: 472 EGY-----SANIDAYGERGYLSEAERVF--ICCQEVNKRTVIEYNVMIKAYGISKSCEKA 524
Query: 431 LELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDM 490
EL + M++ G+T + + + + G+ + ++GY D ++I
Sbjct: 525 CELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISS 584
Query: 491 YAKCGHMEDSKKVF----DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPN 546
+ K G + +++V+ + ++P+ V+Y +I +A G +QA+ +++ G+ N
Sbjct: 585 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGN 644
Query: 547 QVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYS--CLVDAYGRAGRLEEAYQ 604
V + +++ + GY+++ ++ +L + Y+ C+++ Y + +A
Sbjct: 645 SVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEA 704
Query: 605 I---VQKDGSESAWRTLLSACRNHNNTKIGEKS--AKKMIELNP-SDHASYILLSNIYIE 658
I +++ G + + + C N + E + AK+M E+ +D SY + ++
Sbjct: 705 IFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFAL 764
Query: 659 EGKWEEARDCREKMAKTGVKKD 680
+G+++EA + ++M +G++ D
Sbjct: 765 DGRFKEAVETFKEMVSSGIQPD 786
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/633 (17%), Positives = 264/633 (41%), Gaps = 78/633 (12%)
Query: 44 FSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL 103
++++LR W + ++R G++ +L+ +YS G + A C +
Sbjct: 190 YNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVH-ALCWLGKM 248
Query: 104 ----LERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK---CCST 156
++ D V +++ + + +F + F + W + K D+ +S T
Sbjct: 249 SKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKK-WSCDENKADSHVCLSSYTYNTMIDT 307
Query: 157 LGEVMQIHGLASKF------GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME---EKDN 207
G+ QI + F G V + M+ +Y G + + +M+ D
Sbjct: 308 YGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDT 367
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPD-------------QHVLSSTLRACVE 254
++ +IS +T NN E A +FK+M +KPD +H++ E
Sbjct: 368 RTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAE 427
Query: 255 IEDLN-----------TGVQVHGQMIKN------------GHQNDCFVASVLLTLYANFG 291
++D N T + V +M++ ++ + A++ Y G
Sbjct: 428 MDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI--DAYGERG 485
Query: 292 GLRDAEKLF---RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQEL--HRTTSLQIQGA 346
L +AE++F + ++ + ++ +N MI A+ + + ++ +L + + + T +
Sbjct: 486 YLSEAERVFICCQEVNKRTVIEYNVMIKAYG-ISKSCEKACELFESMMSYGVTPDKCTYN 544
Query: 347 TLIAILKSCKNKSDLP-AGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVD 405
TL+ IL S +D+P GR + ++ + A++ + + GQ+ A + + +
Sbjct: 545 TLVQILAS----ADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKE 600
Query: 406 IV----CKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLA 461
+V D + +I + G +A+ + M GI S I +++
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGY 660
Query: 462 INVGKQFHVFAIKS---GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA---QVKPNEVIY 515
++ + + ++S DVY + +I++Y++ + ++ +FD+ + + NE +
Sbjct: 661 LDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTF 720
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY 575
M+C Y +G+ ++A +I + + + + +++ ++L + G ++ + F M+
Sbjct: 721 AMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMV- 779
Query: 576 KYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
I+P+ + L + G ++A + +++
Sbjct: 780 SSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEE 812
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 117/562 (20%), Positives = 224/562 (39%), Gaps = 127/562 (22%)
Query: 229 FFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVH-----GQMIKNGHQNDCFVASVL 283
+ +M ++ +KP ++ST +++ G++VH G+M K G Q D ++
Sbjct: 209 LWDEMIRKGIKP----INSTYGTLIDVYS-KGGLKVHALCWLGKMSKIGMQPDEVTTGIV 263
Query: 284 LTLYANFGGLRDAEKLFRRIDDKDIVA----------WNSMILAHAQLGQ---GSSRSMQ 330
L +Y + AE+ F++ + A +N+MI + + GQ S +
Sbjct: 264 LQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKR 323
Query: 331 LLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV--MKSSVSHPTLVGNALVH 388
+L+E T++ T+I I N L ++ SL+ MK + T N L+
Sbjct: 324 MLEEGIVPTTVTFN--TMIHIYG---NNGQLG---EVTSLMKTMKLHCAPDTRTYNILIS 375
Query: 389 MYSECGQI---GDAFKAFVDIVCKDDS-SWSSIIGTYKQNGMESEALELCKEMLAEGITF 444
++++ I G FK D K D S+ +++ + M EA L EM + +
Sbjct: 376 LHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEI 435
Query: 445 TSYSLPLCISSCSQLLAINVG----KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS 500
Y+ + + K+FHV S + S+ ID Y + G++ ++
Sbjct: 436 DEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGY-----SANIDAYGERGYLSEA 490
Query: 501 KKVFD--AQVKPNEVI-YNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSAC 557
++VF +V VI YN MI Y ++A E+F + GVTP++ T+ ++
Sbjct: 491 ERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQIL 550
Query: 558 SHA----------------GYIEDTLNLFTLM--------------LYK----YKIKPES 583
+ A GY+ D + ++ +YK Y I+P+
Sbjct: 551 ASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDV 610
Query: 584 EHYSCLVDAYGRAGRLEEAYQIVQK--------------------------DGSESAWRT 617
Y L++A+ G +++A V+ D +E+ +R
Sbjct: 611 VVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRK 670
Query: 618 LLSACRNH-------NNTKIGEKSAKKMI-----------ELNPSDHASYILLSNIYIEE 659
LL +C +N I S + M+ + ++ ++ ++ +Y +
Sbjct: 671 LLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKN 730
Query: 660 GKWEEARDCREKMAKTGVKKDP 681
G++EEA ++M + + DP
Sbjct: 731 GRFEEATQIAKQMREMKILTDP 752
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 147/674 (21%), Positives = 258/674 (38%), Gaps = 57/674 (8%)
Query: 11 TLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRS 70
L+ H R GS A + ++ RP+ T++ L++A + IH + +
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 71 GLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRL 130
L D F Y G V + D V + +ISG + F
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDF 324
Query: 131 FSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFGAETDAVVSSAMVDLYA 187
+ M L P+ T+ +LL C LG ++ + G + +++V Y
Sbjct: 325 LNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 188 KCGDVSSCRKIFDSMEE---KDNFVWSSIISGYTVNNRG-------EEAVHFFKDMCKQR 237
GD S K+ M + +V +I+ G ++ + A + +M
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAG 443
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
V ++ +SS R V +MI G D S +L N + A
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 298 KLFRRIDD----KDIVAWNSMI--LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
LF + D+ + M+ A L + + + ++E+ T ++ A + A
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF-------- 403
LK+ K + ++ ++ + +AL+ + + GQ+ A + F
Sbjct: 564 LKAKK----VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619
Query: 404 ---VDIVCK--DDSSWSSIIGTY--------KQNGMESEALELCKEMLAEGITFTSYSLP 450
VD+ K DD+S + TY K + +E EA +L M EG
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE-EARKLLDAMSMEGCEPNQIVYD 678
Query: 451 LCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK- 509
I ++ ++ ++ + G+ +Y SS+ID Y K + + KV ++
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 510 ---PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDT 566
PN VIY MI G G+ +A ++ M+E+ G PN VT+ AM+ G IE
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 567 LNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWRTLLSACRNHN 626
L L M K + P Y L+D + G L+ A+ +++ + ++ W T + R
Sbjct: 799 LELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLE-EMKQTHWPTHTAGYR--- 853
Query: 627 NTKIGEKSAKKMIE 640
K+ E K+ IE
Sbjct: 854 --KVIEGFNKEFIE 865
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 129/311 (41%), Gaps = 24/311 (7%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V T+T ++ S +AG + +A + FN+MR + PN T++ L+ A + ++
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
++ G + S+L+ + G + AC +F ER + G V D
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAG-QVEKACQIF----ER--------MCGSKDVPDV 623
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLK--CCS-TLGEVMQIHGLASKFGAETDAVVSSA 181
M + + + E +P+ T+ +LL C S + E ++ S G E + +V A
Sbjct: 624 DMYFKQYDDNSE----RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 182 MVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
++D K G + +++ M E + +SS+I Y R + A M +
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
P+ + + + ++ + ++ M + G Q + + ++ + G +
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799
Query: 298 KLFRRIDDKDI 308
+L R+ K +
Sbjct: 800 ELLERMGSKGV 810
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 135/687 (19%), Positives = 268/687 (39%), Gaps = 82/687 (11%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
T++ LI L+ + A L ++M Y + + + + + +
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLV----AWNVMISGFAQVGD 123
+ SGL A +SL+ Y N+R + ++ +R++V + ++ G GD
Sbjct: 374 IASGLIPQAQAYASLIEGYCRE-KNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 124 FCMVQRLFSEMWEVEGLKPDNRTFVSLLKCC---STLGEVMQIHGLASKFGAETDAVVSS 180
+ EM G +P+ + +L+K S G+ M++ + G D +
Sbjct: 433 LDGAYNIVKEMI-ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+++ +K + R M E + F + + ISGY + A + K+M +
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
V P++ + + + + + + M+ G D +VL+ + DA
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 297 EKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAIL 352
E++FR + K D+ ++ +I ++LG
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLG------------------------------ 641
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCK--- 409
++ I +++ ++ ++ N L+ + G+I A + ++ K
Sbjct: 642 -------NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 410 -DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF 468
+ ++ +II Y ++G +EA L EM +G+ S+ + C +L +V +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL--NDVERAI 752
Query: 469 HVFAI-KSGYNHDVYVGSSIIDMYAKCGHMEDSKKV--------FDAQVKPNEVIYNAMI 519
+F K G +++I+ K G E +V FD KPN+V YN MI
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 520 CGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKI 579
G + A E+F ++ + P +T+ ++L+ G + +F + I
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI-AAGI 871
Query: 580 KPESEHYSCLVDAYGRAGRLEEAYQIVQK--------DG---SESAWRTLLSACRNHNNT 628
+P+ YS +++A+ + G +A +V + DG S S R LLS
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931
Query: 629 KIGEKSAKKMIELN-PSDHASYILLSN 654
++ EK + M+ L D A+ I L N
Sbjct: 932 EVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/593 (18%), Positives = 242/593 (40%), Gaps = 70/593 (11%)
Query: 110 AWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFV----SLLKCCSTLGEVMQIHG 165
++V+I G ++ + L EM + G+ DN T+ LLK + +H
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSL-GVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 166 LASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNF----VWSSIISGYTVNN 221
+ S G + + + +K G + + +FD M ++S+I GY
Sbjct: 338 MVSH-GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 222 RGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVAS 281
+ +M K+ + + + ++ DL+ + +MI +G + + + +
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 282 VLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHR 337
L+ + DA ++ + + ++ DI +NS+I+ ++ + L++ +
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE- 515
Query: 338 TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIG 397
L+ T A + S+ + + + + V ++ L++ Y + G++
Sbjct: 516 -NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 398 DAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCI 453
+A A+ +V + D +++ ++ +N +A E+ +EM +GI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA---------- 624
Query: 454 SSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK---- 509
DV+ +I+ ++K G+M+ + +FD V+
Sbjct: 625 -------------------------PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 510 PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNL 569
PN +IYN ++ G+ G+ ++A E+ + G+ PN VT+ ++ +G + + L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 570 FTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI--VQKDG---SESAWRTLLSACRN 624
F M K + P+S Y+ LVD R +E A I K G S + + L++
Sbjct: 720 FDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778
Query: 625 HNNTKIGEKSAKKMIE-----LNPSDHASYILLSNIYIEEGKWEEARDCREKM 672
T++ + ++++ + +Y ++ + +EG E A++ +M
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 101/555 (18%), Positives = 214/555 (38%), Gaps = 112/555 (20%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACA------------ 52
NVV +TTLI + L+ A ++ +M+ P+ + ++ L+ +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 53 --------TPALWNVGLQIHGVLVRS---------------GLERDKFAGSSLVYMYSNN 89
P + G I G + S G+ +K + L+ Y
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 90 GSNLRDACCVFHDLLER----DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNR 145
G + +AC + ++++ D + V+++G + + +F EM +G+ PD
Sbjct: 571 GKVI-EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKGIAPDVF 628
Query: 146 TFVSLLKCCSTLGEVMQIHGLASKF---GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSM 202
++ L+ S LG + + + + G + ++ + ++ + + G++ +++ D M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 203 EEK----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDL 258
K + + +II GY + EA F +M + + PD V ++ + C + D+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 259 NTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAH 318
+ + G K G + + L+ FG ++ R+ D +
Sbjct: 749 ERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG----------SF 797
Query: 319 AQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSH 378
+ G+ + + ++ I CK + +L A +++ + +++
Sbjct: 798 DRFGKPNDVTYNIM------------------IDYLCK-EGNLEAAKELFHQMQNANLMP 838
Query: 379 PTLVGNALVHMYSECGQIGDAFKAFVDIVC----KDDSSWSSIIGTYKQNGMESEALELC 434
+ +L++ Y + G+ + F F + + D +S II + + GM ++AL L
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKC 494
+M A+ L IS+C LL SG +AK
Sbjct: 899 DQMFAKNA--VDDGCKLSISTCRALL--------------SG--------------FAKV 928
Query: 495 GHMEDSKKVFDAQVK 509
G ME ++KV + V+
Sbjct: 929 GEMEVAEKVMENMVR 943
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/452 (19%), Positives = 174/452 (38%), Gaps = 64/452 (14%)
Query: 208 FVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ 267
+ + +I G R E+A +M V D H S + ++ + + + +
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 268 MIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSR 327
M+ +G ++ + + + G + A+ LF + ++ A+A L +G R
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ---AYASLIEGYCR 394
Query: 328 ------SMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTL 381
+LL E+ + ++ I T ++K + DL I ++ S +
Sbjct: 395 EKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 382 VGNALVHMYSECGQIGDAFKAF---------VDIVCKDDSSWSSIIGTYKQNGMESEALE 432
+ L+ + + + GDA + DI C + S IIG K M+ EA
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN----SLIIGLSKAKRMD-EARS 508
Query: 433 LCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYA 492
EM+ G+ +++ IS + ++ + G + + + +I+ Y
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 493 KCGH----------------MEDSK-------------KVFDAQ----------VKPNEV 513
K G + D+K KV DA+ + P+
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 514 IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
Y +I G++ G ++A IF + + G+TPN + + +L +G IE L M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 574 LYKYKIKPESEHYSCLVDAYGRAGRLEEAYQI 605
K + P + Y ++D Y ++G L EA+++
Sbjct: 689 SVK-GLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
Query: 423 QNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVY 482
+ G +A+E+ K EG L C A+ K H F S D+
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 483 VGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG 542
+SII+MY+ CG +ED+ VF++ + N + +I +A +GQ + AI+ F+ ++ G
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 543 VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA 602
P+ F + AC G + + L F M +Y I P EHY LV G L+EA
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 603 YQIVQK-DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPS 644
+ V+ + + W TL++ R H + +G++ + +L+ S
Sbjct: 338 LRFVESMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDAS 380
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 5/185 (2%)
Query: 135 WEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGD 191
W EG D + + C L E +H + +D ++++++Y+ CG
Sbjct: 172 WRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGS 231
Query: 192 VSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRA 251
V +F+SM E++ W +I + N +GE+A+ F ++ KPD + A
Sbjct: 232 VEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFA 291
Query: 252 CVEIEDLNTGVQVHGQMIKNGHQNDCFVASV-LLTLYANFGGLRDAEKLFRRIDDKDIVA 310
C + D+N G+ M K C V L+ + A G L +A + + + ++
Sbjct: 292 CGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM-EPNVDL 350
Query: 311 WNSMI 315
W +++
Sbjct: 351 WETLM 355
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 15/206 (7%)
Query: 18 RAGSVPKAFQLFNDMR----VMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLE 73
R G V KA ++ R V+D P + + L C +H + S
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVD-LPRLFWIAQL---CGDAQALQEAKVVHEFITSSVGI 213
Query: 74 RDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSE 133
D A +S++ MYS GS + DA VF+ + ER+L W +I FA+ G FS
Sbjct: 214 SDISAYNSIIEMYSGCGS-VEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 134 MWEVEGLKPDNRTFVSLLKCCSTLGE----VMQIHGLASKFGAETDAVVSSAMVDLYAKC 189
++ EG KPD F + C LG+ ++ + ++G ++V + A+
Sbjct: 273 -FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 190 GDVSSCRKIFDSMEEKDNFVWSSIIS 215
G + + +SME + +W ++++
Sbjct: 332 GYLDEALRFVESMEPNVD-LWETLMN 356
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/553 (19%), Positives = 235/553 (42%), Gaps = 69/553 (12%)
Query: 108 LVAWNVMISGFAQVGDFCMVQRLFSEMWEVE---GLKPDNRTFVSLLKC-C--STLGEVM 161
+V +N ++S A++ F +V L +M +E GL T+ L+ C C S + +
Sbjct: 85 IVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL----YTYNILINCFCRRSQISLAL 140
Query: 162 QIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGY 217
+ G K G E V S++++ Y +S + D M E D ++++I G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 218 TVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDC 277
++N+ EAV M ++ +P+ + + D + + + +M + D
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 278 FVASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQ 333
+ + ++ + + DA LF+ ++ K ++V ++S+I G+ S S L
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 334 ELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSEC 393
+ + + + T A++ + + +++ ++K S+ N+LV+ +
Sbjct: 321 MIEKKINPNL--VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 394 GQIGDAFKAFVDIVCKD----DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSL 449
++ A + F +V KD +++++I + ++ + EL +EM G+
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL------- 431
Query: 450 PLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQV- 508
VG + G HD G ++++KVF V
Sbjct: 432 --------------VGDTVTYTTLIQGLFHD--------------GDCDNAQKVFKQMVS 463
Query: 509 ---KPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIED 565
P+ + Y+ ++ G ++G+ ++A+E+F ++K+ + + + M+ AG ++D
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 566 TLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSAC 622
+LF + K +KP Y+ ++ L+EAY +++K DG T +
Sbjct: 524 GWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Query: 623 RNHNNTKIGEKSA 635
R H + G+K+A
Sbjct: 583 RAH--LRDGDKAA 593
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 118/575 (20%), Positives = 224/575 (38%), Gaps = 91/575 (15%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P ++V + L+S+ + L M+ ++ YT+++L+ + ++ L
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISG 117
+ G +++ G E SSL+ Y +G + DA + ++E D + + +I G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYC-HGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGA---ET 174
L M + G +P+ T+ ++ G+ L +K A E
Sbjct: 200 LFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFF 230
D V+ + ++D K V +F ME K + +SS+IS R +A
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
DM ++++ P+ ++ + A V+ +++ MIK D F + L+ +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 291 GGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA 346
L A+++F + K D+V +N++I + S+ ++ EL R S
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK-----SKRVEDGTELFREMS------ 427
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFV-D 405
H ++ +V++ TL+ L H +C FK V D
Sbjct: 428 ---------------------HRGLVGDTVTYTTLI-QGLFH-DGDCDNAQKVFKQMVSD 464
Query: 406 IVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG 465
V D ++S ++ NG +ALE+ M
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ--------------------------- 497
Query: 466 KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA----QVKPNEVIYNAMICG 521
KS D+Y+ +++I+ K G ++D +F + VKPN V YN MI G
Sbjct: 498 --------KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSA 556
++A + ++++G PN T+ ++ A
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 188/453 (41%), Gaps = 83/453 (18%)
Query: 290 FGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQ-----GSSRSMQLLQELHRTTSLQIQ 344
FGG+ + L IV +N ++ A A++ + MQ L+ +H
Sbjct: 73 FGGMVKSRPL------PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-------- 118
Query: 345 GATLIAILKSCK-NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF 403
G IL +C +S + + +MK + ++L++ Y +I DA A
Sbjct: 119 GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV-AL 177
Query: 404 VDIVCK-----DDSSWSSIIGTYKQNGMESEALELCKEMLAEG-----ITFTSYSLPLCI 453
VD + + D +++++I + SEA+ L M+ G +T+ LC
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 454 SSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQ----VK 509
+ L A+N+ + I++ DV + ++IID K H++D+ +F ++
Sbjct: 238 RGDTDL-ALNLLNKMEAAKIEA----DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 510 PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNL 569
PN V Y+++I +G+ A ++ + + + + PN VTF A++ A G + L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 570 FTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQ---------------------- 607
+ M+ K I P+ Y+ LV+ + RL++A Q+ +
Sbjct: 353 YDDMI-KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 608 -----KDGSE--------------SAWRTLLSACRNHNNTKIGEKSAKKMIELN-PSDHA 647
+DG+E + TL+ + + +K K+M+ P D
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 648 SYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
+Y +L + GK E+A + + M K+ +K D
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 153/421 (36%), Gaps = 95/421 (22%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+VV + T+I S + V A LF +M RPN T+S L+ + W+
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS------ 312
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQ 120
DA + D++E+ +LV +N +I F +
Sbjct: 313 ------------------------------DASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
G F ++L+ +M + + PD T+ SL
Sbjct: 343 EGKFVEAEKLYDDMIK-RSIDPDIFTYNSL------------------------------ 371
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEEKDNF----VWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
V+ + + +++F+ M KD F ++++I G+ + R E+ F++M +
Sbjct: 372 --VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDA 296
+ D ++ ++ D + +V QM+ +G D S+LL N G L A
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 297 EKLFRRIDDK----DIVAWNSMILAHAQLGQGS-------SRSMQLLQELHRTTSLQIQG 345
++F + DI + +MI + G+ S S++ ++ T + I G
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Query: 346 -------ATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGD 398
A+LK K LP ++L+ L+ C +GD
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609
Query: 399 A 399
A
Sbjct: 610 A 610
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 144/642 (22%), Positives = 263/642 (40%), Gaps = 91/642 (14%)
Query: 5 NVVTWTTLISSHLRAGSVPK--AFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQ 62
+++++ TLI++ L++G + A +L + +R RP+ T++ LL AC+
Sbjct: 259 DLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACS---------- 308
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGF 118
RD SNL A VF D+ + DL +N MIS +
Sbjct: 309 -----------RD---------------SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCS---TLGEVMQIHGLASKFGAETD 175
+ G +RLF E+ E++G PD T+ SLL + +V +++ K G D
Sbjct: 343 GRCGLAAEAERLFMEL-ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD 401
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSME-----EKDNFVWSSIISGYTVNNRGEEAVHFF 230
+ + ++ +Y K G + +++ M+ D ++ +I NR EA
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
+M +KP S+ + + M+++G + D SV+L +
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 291 GGLRDAEKLFR-RIDD---KDIVAWNSMILAHAQLGQGS--SRSMQLLQELHRTTSLQIQ 344
R A L+R I D + MIL + + ++++ ++EL L+I
Sbjct: 522 NETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEIS 581
Query: 345 GATLIAILKSCKNKSDLPAGRQIHSLVMKS-SVSHPTLVGNALVHMYSECGQIGDAFKAF 403
+ + C DL A RQ+ + + + TL+ +++ YS G+ +AF+
Sbjct: 582 S---VLVKGEC---FDL-AARQLKVAITNGYELENDTLL--SILGSYSSSGRHSEAFELL 632
Query: 404 VDIVCKDDSSWSS-------IIGTYKQNGMESEALELCKEMLAEGITFTSYS-----LPL 451
K+ +S S I+ K N + + E + G F S + L
Sbjct: 633 E--FLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHC 690
Query: 452 CISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD-AQVKP 510
C+++ A V + SG V S++ +Y K G E + +V + A+ K
Sbjct: 691 CVANEHYAEASQVFSDLRL----SGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKG 746
Query: 511 NEV----IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDT 566
+Y +I Y ++A + L ++G TP+ T+ +++SA + G E
Sbjct: 747 FHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERA 806
Query: 567 LNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
+F M+ + P E + L+ A GRLEE Y +V++
Sbjct: 807 RAIFNTMM-RDGPSPTVESINILLHALCVDGRLEELYVVVEE 847
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 133/290 (45%), Gaps = 15/290 (5%)
Query: 279 VASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQE 334
V + ++ +Y+ G A++L + + D++++N++I A + G + L +
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 335 LHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTL-VGNALVHMYSEC 393
+ R + L+ T +L +C S+L ++ M++ P L NA++ +Y C
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE-DMEAHRCQPDLWTYNAMISVYGRC 345
Query: 394 GQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSL 449
G +A + F+++ K D +++S++ + + + E+ ++M G +
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 450 PLCISSCSQLLAINVGKQFHV-FAIKSGYNHDVYVGSSIIDMYAKCGHMEDS----KKVF 504
I + +++ Q + SG N D + +ID K ++ ++
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 505 DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAML 554
D +KP Y+A+ICGYA G+ ++A + F+ + ++G P+ + + ML
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 93/467 (19%), Positives = 194/467 (41%), Gaps = 97/467 (20%)
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEK---------DNFVWSSIISGYTVNNRGEEAVH 228
V +AM+ +Y++ G S +++ D+M ++ + + + + SG N E +
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL- 285
Query: 229 FFKDMCKQR-VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLY 287
DM + ++PD ++ L AC +L+ V+V M + Q D + + ++++Y
Sbjct: 286 ---DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 288 ANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI 343
G +AE+LF ++ K D V +NS++ A A+ R+ + ++E+++ Q+
Sbjct: 343 GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR-----ERNTEKVKEVYQ----QM 393
Query: 344 QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF 403
Q K + N ++HMY + GQ+ A + +
Sbjct: 394 Q----------------------------KMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 404 VDIVC-----KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGI--TFTSYSLPLCISSC 456
D+ D +++ +I + + EA L EML GI T +YS +C +
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYA- 484
Query: 457 SQLLAINVGKQFH---VFA--IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK-- 509
GK+ F+ ++SG D S ++D+ + + ++ +
Sbjct: 485 ------KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 510 --PNEVIYNAMICGYAHHGQAKQAIE-IFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDT 566
P+ +Y MI G ++ + I M E G+ P +++ + + C
Sbjct: 539 HTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGEC--------- 589
Query: 567 LNLFTLMLYKYKI------KPESEHYSCLVDAYGRAGRLEEAYQIVQ 607
F L + K+ + E++ ++ +Y +GR EA+++++
Sbjct: 590 ---FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLE 633
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 140/312 (44%), Gaps = 44/312 (14%)
Query: 382 VGNALVHMYSECGQIGDAFKAFVDIV-----CKDDSSWSSIIGTYKQNG--MESEALELC 434
V NA++ +YS G+ A + VD + D S++++I ++G + A+EL
Sbjct: 227 VYNAMMGVYSRSGKFSKA-QELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGY--NHDVYVGSSIIDMYA 492
+ G+ + + +S+CS+ N+ VF + D++ +++I +Y
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSR--DSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 493 KCGHMEDSKKVF-DAQVK---PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQV 548
+CG +++++F + ++K P+ V YN+++ +A ++ E++ ++K G +++
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 549 TFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
T+ ++ G ++ L L+ M P++ Y+ L+D+ G+A R EA ++ +
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 609 DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDC 668
+G K + +Y L Y + GK EEA D
Sbjct: 464 ------------------MLDVGIKPTLQ----------TYSALICGYAKAGKREEAEDT 495
Query: 669 REKMAKTGVKKD 680
M ++G K D
Sbjct: 496 FSCMLRSGTKPD 507
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 136/715 (19%), Positives = 282/715 (39%), Gaps = 54/715 (7%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+ +T+T LI S +A +A L ++M + +P T+S L+ A
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE----RDLVAWNVMISGFAQ 120
++RSG + D A S ++ + G+ R A ++ D++ + +MI G +
Sbjct: 497 SCMLRSGTKPDNLAYSVMLDVLLR-GNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
+Q+ +M E+ G+ P + V + C L + + + E D ++S
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLS- 614
Query: 181 AMVDLYAKCGDVSSCRKIFDSMEE-----KDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
++ Y+ G S ++ + ++E K + I+ VNN +F D C
Sbjct: 615 -ILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCV 673
Query: 236 QRVKPDQHVLSSTL-RACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ TL CV E QV + +G + V ++ +Y G
Sbjct: 674 HGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPE 733
Query: 295 DAEKLFRRIDDKDI-----VAWNSMILAHAQ--LGQGSSRSMQLLQELHRTTSLQIQGAT 347
A ++ + + K + +I A+ + L Q + + L++ RT L+ +
Sbjct: 734 TAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSL 793
Query: 348 LIAILK-SCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAF---KAF 403
+ A + C ++ R I + +M+ S N L+H G++ + + +
Sbjct: 794 MSAYAQCGCYERA-----RAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEEL 848
Query: 404 VDIVCK-DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAI 462
D+ K SS ++ + + G E ++ M A G T + I + +
Sbjct: 849 QDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRV 908
Query: 463 NVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKK-------VFDAQVKPNEVIY 515
+ ++ + ++ + +S++ MY +ED KK + + ++P+E Y
Sbjct: 909 RDAEIMVSEMEEANFKVELAIWNSMLKMYTA---IEDYKKTVQVYQRIKETGLEPDETTY 965
Query: 516 NAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLY 575
N +I Y + ++ + + G+ P T+ +++SA +E LF +L
Sbjct: 966 NTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Query: 576 KYKIKPESEHYSCLVDAYGRAG---RLEEAYQIVQKDGSESAWRT---LLSACRNHNNTK 629
K +K + Y ++ +G + E+ Q+++ G E T L+ + + N +
Sbjct: 1026 K-GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQ 1084
Query: 630 IGEKSAKKM----IELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
EK + +EL ++S I + Y+ + + +M K G++ D
Sbjct: 1085 EAEKVLSNLKDTEVELTTLPYSSVI---DAYLRSKDYNSGIERLLEMKKEGLEPD 1136
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 189/414 (45%), Gaps = 41/414 (9%)
Query: 204 EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQ 263
E D ++S+I+G+ + NR EEA+ M + +KPD + ++ + + + +N +
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 264 VHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHA 319
+ QM G + D + + L+ N G RDA+ L R + + D++ +N++I A
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 320 QLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHP 379
+ G+ +L E+ R S+ T +++ + + RQ+ L M++ P
Sbjct: 259 KEGKFLDAE-ELYNEMIR-MSIAPNIFTYTSLINGFCMEGCVDEARQMFYL-METKGCFP 315
Query: 380 TLVG-NALVHMYSECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELC 434
+V +L++ + +C ++ DA K F ++ K + +++++I + Q G + A E+
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 435 KEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKC 494
M++ G+ P I + + LL H YN V I
Sbjct: 376 SHMVSRGV-------PPNIRTYNVLL--------HCLC----YNGKVKKALMIF------ 410
Query: 495 GHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAML 554
ED +K V PN YN ++ G ++G+ ++A+ +F + K + +T+ ++
Sbjct: 411 ---EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 555 SACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
AG +++ +NLF + K +KP Y+ ++ R G EA+ + +K
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSK-GVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 188/455 (41%), Gaps = 50/455 (10%)
Query: 107 DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK--CCST-LGEVMQI 163
DL N++++ F Q + +M ++ G +PD TF SL+ C + E M +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKL-GFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 164 HGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTV 219
+ G + D V+ + ++D K G V+ +FD ME D +++S+++G
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 220 NNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFV 279
+ R +A + M K+++KPD ++ + A V+ +++ +MI+ + F
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 280 ASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQEL 335
+ L+ + G + +A ++F ++ K D+VA+ S+I + + +M++ E+
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK-VDDAMKIFYEM 343
Query: 336 HRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQ 395
+ L T +++ +++ S ++ V N L+H G+
Sbjct: 344 SQK-GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 396 IGDAFKAFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS 455
+ A F D+ ++ + I TY +L G+ +
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTY--------------NVLLHGLCYNG--------- 439
Query: 456 CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKC--GHMEDSKKVF----DAQVK 509
+ K VF D+ + + I + C G ++++ +F VK
Sbjct: 440 -------KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Query: 510 PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVT 544
PN V Y MI G G +A +F ++++GV+
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 13/248 (5%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++VT+T+LI+ + +A + N M M +P+ ++ ++ + N L +
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQ 120
+ G+ D +SLV N+G RDA + + +R D++ +N +I F +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGR-WRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAETDAV 177
G F + L++EM + + P+ T+ SL+ G E Q+ L G D V
Sbjct: 260 EGKFLDAEELYNEMIRMS-IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+++++ + KC V KIF M +K + ++++I G+ + A F M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 234 CKQRVKPD 241
+ V P+
Sbjct: 379 VSRGVPPN 386
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 131/316 (41%), Gaps = 47/316 (14%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V+T+ LI + ++ G A +L+N+M M PN +T++ L+ + Q+
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDL----VAWNVMISGFAQ 120
++ G D A +SL+ + + DA +F+++ ++ L + + +I GF Q
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFC-KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC-CSTLGEVMQIHGLASKFGAETDAVVS 179
VG + Q +FS M G+ P+ RT+ LL C C
Sbjct: 365 VGKPNVAQEVFSHMVS-RGVPPNIRTYNVLLHCLCYN----------------------- 400
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEKDN-------FVWSSIISGYTVNNRGEEAVHFFKD 232
G V IF+ M++++ + ++ ++ G N + E+A+ F+D
Sbjct: 401 ----------GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGG 292
M K+ + + ++ + + V + + G + + + +++ G
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510
Query: 293 LRDAEKLFRRIDDKDI 308
+A LFR++ + +
Sbjct: 511 KHEAHVLFRKMKEDGV 526
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/310 (18%), Positives = 133/310 (42%), Gaps = 13/310 (4%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P +++ +T L++ + L + +++M + YT ++L+ + +
Sbjct: 68 PLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLAS 127
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISG 117
G +++ G E D +SL+ + G+ + +A + + ++E D+V + +I
Sbjct: 128 SFLGKMMKLGFEPDIVTFTSLINGFC-LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGL---ASKFGAET 174
+ G LF +M E G++PD + SL+ G L +K +
Sbjct: 187 LCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFF 230
D + +A++D + K G ++++ M + F ++S+I+G+ + +EA F
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
M + PD +S + + + ++ +++ +M + G + + L+ +
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 291 GGLRDAEKLF 300
G A+++F
Sbjct: 366 GKPNVAQEVF 375
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 121/295 (41%), Gaps = 31/295 (10%)
Query: 410 DDSSWSSIIGTYKQ---NGMES----EALELCKEMLAEGITFTSYSLPLCISSCSQLLAI 462
D S W Y++ NG+ S EAL+L M+ S LP I L I
Sbjct: 29 DLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVE------SRPLPSIIDFTKLLNVI 82
Query: 463 NVGKQFHVFAIKS------GYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK----PNE 512
K+F V G +HD+Y + +++ + + + +K P+
Sbjct: 83 AKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDI 142
Query: 513 VIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTL 572
V + ++I G+ + ++A+ + + + G+ P+ V + ++ + G++ L+LF
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 573 MLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES------AWRTLLSACRNHN 626
M Y I+P+ Y+ LV+ +GR +A +++ + L+ A
Sbjct: 203 M-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 627 NTKIGEKSAKKMIELNPSDHA-SYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
E+ +MI ++ + + +Y L N + EG +EAR M G D
Sbjct: 262 KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 175/415 (42%), Gaps = 57/415 (13%)
Query: 168 SKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRG 223
S G E + V +++++ YA GDV ++ M E+ + ++S+I GY
Sbjct: 253 SSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLM 312
Query: 224 EEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVL 283
EEA H F+ + ++++ DQH+ + + V+VH MI+ G + + + + L
Sbjct: 313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSL 372
Query: 284 LTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI 343
+ Y G L +AE++F R++D W+ L+ H T + +
Sbjct: 373 INGYCKSGQLVEAEQIFSRMND-----WS-------------------LKPDHHTYNTLV 408
Query: 344 QGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF 403
G + D +++ VM N L+ YS G D +
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTY---------NILLKGYSRIGAFHDVLSLW 459
Query: 404 VDI----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQL 459
+ V D+ S S+++ + G +EA++L + +LA G+ + +L + IS ++
Sbjct: 460 KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM 519
Query: 460 LAINVGKQF----HVFAIK------SGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK 509
+N K+ ++F K +H Y ++ + +A +ME K +F
Sbjct: 520 EKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME-RKGIF----- 573
Query: 510 PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIE 564
P +YN +I G + + ++ L G+TP T+ A+++ + G I+
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 141/719 (19%), Positives = 290/719 (40%), Gaps = 68/719 (9%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
+ ++ + G V A +F++M P+ + + LL V L ++ +
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL------LERDLVAWNVMISGFAQV 121
+ + D F S +V Y +G+ D VF LE ++V +N +I+G+A +
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGN--VDKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAETDAVV 178
GD + R+ M E G+ + T+ SL+K G E + L + D +
Sbjct: 275 GDVEGMTRVLRLMSE-RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
++D Y + G + ++ D+M E + + +S+I+GY + + EA F M
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+KPD H ++ + ++ +++ QM + ++LL Y+ G
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 295 DA----EKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
D + + +R + D ++ ++++ A +LG + +M+L + + L TL
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGD-FNEAMKLWENV-LARGLLTDTITLNV 511
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAF--KAFVD--- 405
++ + ++I V AL H Y + G + +AF K +++
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 406 IVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG 465
I + + I G +K + A +L E+ A G+T T + I+ + I+
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVA-DLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 466 KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS----KKVFDAQVKPNEVIYNAMICG 521
I+ G +V + S I + + ++++ +K+ D ++ ++ G
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD---------FDLLLPG 681
Query: 522 YAHHGQ------------AKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNL 569
Y + K A + K + PN + + ++ AG +ED L
Sbjct: 682 YQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKL 741
Query: 570 FTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSESAWRTLLSACRNHNNT- 628
F+ +L + P+ Y+ L+ AG + +A+ + E A + ++ +N
Sbjct: 742 FSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL----RDEMALKGIIPNIVTYNALI 797
Query: 629 ----KIGE-KSAKKMIELNP-----SDHASYILLSNIYIEEGKWEEARDCREKMAKTGV 677
K+G A++++ P + +Y L + ++ G EA +EKM + G+
Sbjct: 798 KGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 127/281 (45%), Gaps = 15/281 (5%)
Query: 4 RNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRA-CATPALWNVGLQ 62
RNVVT+T+LI + + G + +A +F ++ +++ + VL+ C T + + ++
Sbjct: 294 RNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRD-AVR 352
Query: 63 IHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGF 118
+H ++ G+ + +SL+ Y +G L +A +F + L+ D +N ++ G+
Sbjct: 353 VHDNMIEIGVRTNTTICNSLINGYCKSGQ-LVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 119 AQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLG---EVMQIHGLASKFGAETD 175
+ G +L +M + E + P T+ LLK S +G +V+ + + K G D
Sbjct: 412 CRAGYVDEALKLCDQMCQKE-VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNAD 470
Query: 176 AVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFK 231
+ S +++ K GD + K+++++ + D + +ISG + EA
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD 530
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNG 272
++ R KP + ++ +L V M + G
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 128/602 (21%), Positives = 245/602 (40%), Gaps = 77/602 (12%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
V T+T LI S + +A L +M +PN +T++VL+ + + + ++ G
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNG---------------------------------SN 92
++ GL + ++L+ Y G SN
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 93 LRDACCVFHDLLER----DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFV 148
+ A V + +LER D+V +N +I G + G+F RL S M + GL PD T+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND-RGLVPDQWTYT 501
Query: 149 SLL-KCCST--LGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK 205
S++ C + + E + + G + V+ +A++D Y K G V + + M K
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 206 ----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTG 261
++ ++++I G + + +EA + M K ++P + + ++ D +
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 262 VQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDD----KDIVAWNSMILA 317
QM+ +G + D + + Y G L DAE + ++ + D+ ++S+I
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 318 HAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVM---KS 374
+ LGQ ++ + +L+ + R T + T ++++K H L M K
Sbjct: 682 YGDLGQ-TNFAFDVLKRM-RDTGCEPSQHTFLSLIK--------------HLLEMKYGKQ 725
Query: 375 SVSHPTLVGNALVHMYSECGQIGDAFKAFVD-IVCKDDSSWSSIIGTYKQNGMESEALEL 433
S P L A+ +M E + + + V+ V + S+ +I + G A ++
Sbjct: 726 KGSEPELC--AMSNMM-EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKV 782
Query: 434 CKEMLA-EGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYA 492
M EGI+ + +S C +L N + I G+ + +I
Sbjct: 783 FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842
Query: 493 KCGHMEDSKKVFDAQVK----PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQV 548
K G E VF ++ +E+ + +I G G + E+F ++EKNG +
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQ 902
Query: 549 TF 550
T+
Sbjct: 903 TY 904
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 152/726 (20%), Positives = 295/726 (40%), Gaps = 100/726 (13%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
+ TL++S R G V + Q++ +M PN YT++ ++ Q +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 69 RSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFAQVGDF 124
+GL+ D F +SL+ Y +L A VF+++ R+ VA+ +I G
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQR-KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLK--CCSTL-GEVMQIHGLASKFGAETDAVVSSA 181
LF +M + E P RT+ L+K C S E + + + G + + +
Sbjct: 305 DEAMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 182 MVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
++D R++ M EK + ++++I+GY E+AV + M ++
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
+ P+ + + ++IK +++ A +L
Sbjct: 424 LSPN--------------------TRTYNELIKGYCKSNVHKAMGVLN------------ 451
Query: 298 KLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS-CK 356
K+ R D+V +NS+I Q G+ S L L L T +++ S CK
Sbjct: 452 KMLERKVLPDVVTYNSLI--DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKD----DS 412
+K A SL K V+ ++ AL+ Y + G++ +A ++ K+
Sbjct: 510 SKRVEEACDLFDSLEQKG-VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 413 SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFA 472
+++++I +G EA L ++M+ G+ T + + I + G H ++
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR-----LLKDGDFDHAYS 623
Query: 473 -----IKSGYNHDVYVGSSIIDMYAKCGHMEDSK----KVFDAQVKPNEVIYNAMICGYA 523
+ SG D + ++ I Y + G + D++ K+ + V P+ Y+++I GY
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 524 HHGQAKQAIEIFTMLEKNGVTPNQVTFLAML----------------SACSHAGYIE-DT 566
GQ A ++ + G P+Q TFL+++ C+ + +E DT
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 567 LNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRL---EEAYQIVQKD----GSESAWRTLL 619
+ + ++ + P ++ Y L+ G L E+ + +Q++ SE + LL
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 620 SAC---RNHNNTKIGEKSAKKMIELN--PSDHASYILLSNIYIEEGKWEEARDCREKMAK 674
S C + HN K MI + P + +L+ +Y ++G+ E + + +
Sbjct: 804 SCCCKLKKHNE---AAKVVDDMICVGHLPQLESCKVLICGLY-KKGEKERGTSVFQNLLQ 859
Query: 675 TGVKKD 680
G +D
Sbjct: 860 CGYYED 865
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 137/341 (40%), Gaps = 31/341 (9%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+VVT+ +LI R+G+ A++L + M P+++T++ ++ + +
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDL----VAWNVMISGFAQ 120
L + G+ + ++L+ Y G + +A + +L ++ + +N +I G
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAG-KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAV 177
G L +M ++ GL+P T L+ G+ + + G + DA
Sbjct: 580 DGKLKEATLLEEKMVKI-GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ + Y + G + + M E D F +SS+I GY + A K M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 234 CKQRVKPDQHVLSSTLRACVEIE------------------DLNTGVQVHGQMIKNGHQN 275
+P QH S ++ +E++ + +T V++ +M+++
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 276 DCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMIL 316
+ L+ G LR AEK+F + + ++ + ++
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 123/592 (20%), Positives = 222/592 (37%), Gaps = 80/592 (13%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P V +I +R A L+ M + N Y+F++L++ + L
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSL 161
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
G L + G + D ++L+ H L D ++ + + G+
Sbjct: 162 STFGKLTKLGFQPDVVTFNTLL-----------------HGLCLEDRISEALALFGYMVE 204
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAVV 178
F LF +M E+ GL P TF +L+ G V++ L +K G D V
Sbjct: 205 TGFLEAVALFDQMVEI-GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
+V+ K GD S + MEE D ++S+II + +A + F +M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
++ + P+ + + + ++ MI+ D + L++ G L
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 295 DAEKL----FRRIDDKDIVAWNSMILAHAQLGQ-GSSRSMQLLQELHRTTSLQIQGATLI 349
+AEKL R D V +NSMI + + ++ M L + T+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN----TII 439
Query: 350 AILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI--- 406
+ C+ K + G Q+ + + + T N L+H + E + A F ++
Sbjct: 440 DVY--CRAKR-VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 407 -VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG 465
VC D + + ++ + +N EALEL
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALEL-------------------------------- 524
Query: 466 KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA----QVKPNEVIYNAMICG 521
F V + S + D + II K ++++ +F + V+P+ YN MI G
Sbjct: 525 --FEVIQM-SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
+ A +F ++ NG P+ T+ ++ C AG I+ ++ L + M
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 190/458 (41%), Gaps = 48/458 (10%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
V+T+ TLI+ G V +A L N M + T+ ++ L +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQV 121
+ + ++ D S+++ +G + DA +F ++LE+ ++ +N MI GF
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHH-SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAE---TDAVV 178
G + QRL +M E E + PD TF +L+ G++ + L + D V
Sbjct: 345 GRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
++M+ + K + +FD M D +++II Y R +E + +++ ++ +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK 298
+ ++ + E+++LN + +MI +G D ++LL + L +A +
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 299 LFRRID----DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
LF I D D VA+N +I G + ++ + SL I G
Sbjct: 524 LFEVIQMSKIDLDTVAYNIII-------HGMCKGSKVDEAWDLFCSLPIHGV-------- 568
Query: 355 CKNKSDLPA-GRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
+ D+ I KS++S N L H + G D+S+
Sbjct: 569 ---EPDVQTYNVMISGFCGKSAISD----ANVLFHKMKDNGHE------------PDNST 609
Query: 414 WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL 451
++++I + G +++EL EM + G + ++++ +
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/425 (17%), Positives = 171/425 (40%), Gaps = 36/425 (8%)
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
+ +I + NR + A+ ++ M +R+ + + + ++ + L+ + G++ K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 271 NGHQNDCFVASVLL----------TLYANFG-----GLRDAEKLFRRIDD----KDIVAW 311
G Q D + LL A FG G +A LF ++ + ++ +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV 371
N++I + +G L L I T I+ D + + S +
Sbjct: 230 NTLI--NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 372 MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS----SWSSIIGTYKQNGME 427
++ + ++ +A++ + G DA F +++ K + +++ +I + G
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 428 SEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH-----DVY 482
S+A L ++M+ I + IS+ ++ GK F + H D
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISA-----SVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 483 VGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG 542
+S+I + K +D+K +FD P+ V +N +I Y + + +++ + + G
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 543 VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA 602
+ N T+ ++ + +LF M+ + + P++ + L+ + +LEEA
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 603 YQIVQ 607
++ +
Sbjct: 522 LELFE 526
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 125/612 (20%), Positives = 269/612 (43%), Gaps = 67/612 (10%)
Query: 1 MPHRNVVTWTTLISSHLRA--GSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWN 58
+ H +L+ S++R S+ L + + P++ F + L A +
Sbjct: 89 LSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPH 148
Query: 59 VGLQIHGVLVRSGLERDKFAGSSLV-----YMYSNNGSNLRDACCVFHDLLE----RDLV 109
V LQI ++R L+ + ++L+ Y S + S+ R+ VF D+++ ++
Sbjct: 149 VALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSARE---VFDDMVKIGVSLNVQ 205
Query: 110 AWNVMISGFAQVGDF----CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHG 165
+NV+++G+ G M++R+ SE + PDN T+ ++LK S G + +
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEF----KVNPDNVTYNTILKAMSKKGRLSDLKE 261
Query: 166 L---ASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYT 218
L K G + V + +V Y K G + +I + M++ D ++ +I+G
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLC 321
Query: 219 VNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCF 278
E + M +++PD ++ + C E+ G+ + + + +ND
Sbjct: 322 NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL-----GLSLEARKLMEQMENDGV 376
Query: 279 VASVLLTLYANFGGLRDAEK---LFRRIDD--------KDIVAWNSMILAHAQLGQGSSR 327
A+ + T + L EK + R++ + DIV ++++I A+ ++G S
Sbjct: 377 KANQV-THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG- 434
Query: 328 SMQLLQELHRTTSLQIQGATLIAILKS-CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNAL 386
++++++E+ + +++ TL IL + CK + A ++S + + G +
Sbjct: 435 ALEMMREMGQK-GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
Query: 387 VHMYSECGQIGDAFKAFVDI----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGI 442
+ + E ++ A + + ++ + S+++S+IG +G A+E E+ G+
Sbjct: 494 MGFFRE-EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552
Query: 443 -----TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM 497
TF S L C + +F+ +IK + D Y + +++ K G
Sbjct: 553 LPDDSTFNSIILGYCKEG-----RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 498 EDSKKVFDAQVKPNEV---IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAML 554
E + F+ ++ EV YN MI + + K+A ++ + +E+ G+ P++ T+ + +
Sbjct: 608 EKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 555 SACSHAGYIEDT 566
S G + +T
Sbjct: 668 SLLMEDGKLSET 679
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/520 (19%), Positives = 212/520 (40%), Gaps = 64/520 (12%)
Query: 186 YAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ-RVKP 240
Y +SS R++FD M + + ++ +++GY + + E+A+ + M + +V P
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 241 DQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLF 300
D ++ L+A + L+ ++ M KNG + + L+ Y G L++A ++
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 301 RRIDD----KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCK 356
+ D+ +N IL + GS R L + ++ LQ T ++ C
Sbjct: 299 ELMKQTNVLPDLCTYN--ILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC- 355
Query: 357 NKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSE---CGQ-----IGDAFKAFVDI-- 406
G + + + + + + N + H S C + + K VD+
Sbjct: 356 ----FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 407 VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGK 466
D ++ ++I Y + G S ALE+ +EM +GI + +L + + + ++
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 467 QFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHG 526
A K G+ I+D EV Y +I G+
Sbjct: 472 NLLNSAHKRGF---------IVD----------------------EVTYGTLIMGFFREE 500
Query: 527 QAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY 586
+ ++A+E++ ++K +TP TF +++ H G E + F L + + P+ +
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD-ELAESGLLPDDSTF 559
Query: 587 SCLVDAYGRAGRLEEAYQIVQKDGSES------AWRTLLSACRNHNNTKIGEKSAKKMIE 640
+ ++ Y + GR+E+A++ + S LL+ T+ +IE
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Query: 641 LNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
D +Y + + + ++ K +EA D +M + G++ D
Sbjct: 620 EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 501 KKVFDAQVKPNEVIYNAMICG---YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSAC 557
+K+ ++KPN + N ++ G Y A E+F + K GV+ N TF +++
Sbjct: 155 QKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGY 214
Query: 558 SHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIV 606
G +ED L + M+ ++K+ P++ Y+ ++ A + GRL + +++
Sbjct: 215 CLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 194/456 (42%), Gaps = 31/456 (6%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+++T+ TL+ +AG V A + +M+ + P+ +TFS+L ++ L ++
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVA----WNVMISGFAQ 120
V SG++ + + S L+ G + A + + + LV +N MI G+ +
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEG-KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAV 177
GD + R+ E E +G+KPD+ + L++ LGE+ +K G
Sbjct: 402 KGDL-VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNN---RGE---EAVHFFK 231
+ ++ Y + + C I ME DN +++S T+ N +G EA +
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEME--DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFG 291
DM + V P + + + C + + +M+K G + + + L+ + G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Query: 292 GLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGAT 347
L +AE L I K D+ +NS+I + G R + L +E+ R + ++ T
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN-VQRCIALYEEMKR-SGIKPTLKT 636
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV 407
++ C + R + +K + LV N ++H Y+ G + AF ++
Sbjct: 637 YHLLISLCTKEGIELTERLFGEMSLKPDL----LVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Query: 408 CK----DDSSWSSIIGTYKQNGMESEALELCKEMLA 439
K D ++++S+I + G E L EM A
Sbjct: 693 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNA 728
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 117/609 (19%), Positives = 237/609 (38%), Gaps = 71/609 (11%)
Query: 22 VPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFA-GS 80
+ +A LF +R P+ + ++LL + V + + ++ S KF G
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 81 SL--VYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVE 138
++ S+ G L + HD + + +NV+I G + ++LF EM
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA-- 242
Query: 139 GLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKI 198
R SL + + ++D Y K G+ K+
Sbjct: 243 -----RRLLPSL--------------------------ITYNTLIDGYCKAGNPEKSFKV 271
Query: 199 FDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVE 254
+ M+ E +++++ G E+A + K+M PD S
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 255 IEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVA---- 310
E + V+ + +G + + + S+LL G + AE++ R K +V
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 311 WNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQG------ATLIAILKSCKNKSDLPAG 364
+N+MI G R L+ + +++ QG A I + C+ A
Sbjct: 392 YNTMI-------DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 365 RQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI----VCKDDSSWSSIIGT 420
++++ + +K VS N L+ Y + F ++ + S+ ++I
Sbjct: 445 KEVNKMKLKG-VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 421 YKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHD 480
+ EA + ++M G++ + I C I +F +K G +
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 481 VYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFT 536
+ +++ID + G + +++ + +KP+ YN++I GY G ++ I ++
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 537 MLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRA 596
++++G+ P T+ ++S C+ G IE T LF M +KP+ Y+ ++ Y
Sbjct: 624 EMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM----SLKPDLLVYNGVLHCYAVH 678
Query: 597 GRLEEAYQI 605
G +E+A+ +
Sbjct: 679 GDMEKAFNL 687
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 126/616 (20%), Positives = 270/616 (43%), Gaps = 51/616 (8%)
Query: 11 TLISSHL-RAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLVR 69
TL+ HL + +F ++ D RP+++ + ++A L +VG G+ +
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAV--KLSDVG---KGLELF 202
Query: 70 SGLERDKFAGSSLVYMYSNNG----SNLRDACCVFHDLLER----DLVAWNVMISGFAQV 121
+ ++ D+ S +Y +G + DA +F ++L R L+ +N +I G+ +
Sbjct: 203 NRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKA 262
Query: 122 GDFCMVQRLFS--EMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASK---FGAETDA 176
G+ ++ F E + + ++P TF +LLK G V + + G DA
Sbjct: 263 GN---PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 177 VVSSAMVDLYAKCGDVSSCRKIF----DSMEEKDNFVWSSIISGYTVNNRGEEAVHFF-K 231
S + D Y+ + ++ DS + + + S +++ + E+A +
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGR 379
Query: 232 DMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFG 291
+M K V P++ + ++ + DL M K G + D + L+ + G
Sbjct: 380 EMAKGLV-PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 292 GLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQ--IQG 345
+ +AEK ++ K + +N +I + + + + +L+E+ ++ +
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE-FDKCFDILKEMEDNGTMPNVVSY 497
Query: 346 ATLIAILKSCKNKSDLPAGRQIHSLVMKS-SVSHPTLVGNALVHMYSECGQIGDAFKAFV 404
TLI L CK L A QI M+ VS + N L+ G+I DAF+
Sbjct: 498 GTLINCL--CKGSKLLEA--QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSK 553
Query: 405 DIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLL 460
+++ K + +++++I G SEA +L E+ +G+ ++ IS
Sbjct: 554 EMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG--F 611
Query: 461 AINVGKQFHVFA--IKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF-DAQVKPNEVIYNA 517
A NV + ++ +SG + +I + K G +E ++++F + +KP+ ++YN
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNG 670
Query: 518 MICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKY 577
++ YA HG ++A + + + + ++ T+ +++ G + + +L M +
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR- 729
Query: 578 KIKPESEHYSCLVDAY 593
+++PE++ Y+ +V +
Sbjct: 730 EMEPEADTYNIIVKGH 745
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 20/234 (8%)
Query: 463 NVGKQFHVFAIKSGYNHD-----VYVGSSIIDMYAKCGHMEDSKKVFDA----QVKPNEV 513
+VGK +F + HD V++ + +ID K M D++++FD ++ P+ +
Sbjct: 194 DVGKGLELF---NRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLI 250
Query: 514 IYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
YN +I GY G +++ ++ ++ + + P+ +TF +L AG +ED N+ M
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Query: 574 LYKYKIKPESEHYSCLVDAYGRAGRLEEA---YQIVQKDGSESAWRT---LLSA-CRNHN 626
P++ +S L D Y + E A Y+ G + T LL+A C+
Sbjct: 311 -KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 627 NTKIGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
K E ++M + + Y + + Y +G AR E M K G+K D
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 119/653 (18%), Positives = 264/653 (40%), Gaps = 58/653 (8%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
N T+T ++SS+ + G +A + F +M+ + P E T+S ++ W + ++
Sbjct: 292 NEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLY 351
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISG-----FA 119
+ G+ + ++++ +Y N A +F D +ER+ + + +I G +
Sbjct: 352 EDMRSQGIVPSNYTCATMLSLYYKT-ENYPKALSLFAD-MERNKIPADEVIRGLIIRIYG 409
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS 179
++G F Q +F E E L D +T++++ + G V++ + +
Sbjct: 410 KLGLFHDAQSMFEET-ERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSR 468
Query: 180 SA---MVDLYAKCGDVSSCRKIFDSMEE---KDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
A M+ YAK +V + F ++ + D + +++ YT N GE+A F K +
Sbjct: 469 FAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQI 528
Query: 234 CKQRVKPDQHVLSSTLRA------CVEIEDL------------NTGVQVHGQM--IKNGH 273
+V D + + +R E +DL N VQ + I N H
Sbjct: 529 MVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKH 588
Query: 274 ----------QNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDI--VAWNSMILAHAQL 321
Q D ++L L G L + + + + D+ A N +I + +
Sbjct: 589 DKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVR- 647
Query: 322 GQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTL 381
+G +++ ++ L+++ T+ ++ + L ++++ +S ++
Sbjct: 648 -EGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSV 706
Query: 382 VGNALVHMYSECGQIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEM 437
+ +++ Y CG + DA+ F++ K + S ++ G EA + +
Sbjct: 707 I-RSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTC 765
Query: 438 LAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHM 497
L + I + I + + + + + SG + +++I +Y + +
Sbjct: 766 LEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQL 825
Query: 498 EDSKKVFDAQVKP----NEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAM 553
+ + ++F + +E IY MI Y G+ +A+ +F+ ++K G+ P ++ M
Sbjct: 826 DKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMM 885
Query: 554 LSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIV 606
+ C+ + + L M + S Y L+ Y + + EA + +
Sbjct: 886 VKICATSRLHHEVDELLQAMERNGRCTDLST-YLTLIQVYAESSQFAEAEKTI 937
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 127/664 (19%), Positives = 267/664 (40%), Gaps = 67/664 (10%)
Query: 38 RPNEYTFSVLLRACATPALWNVGLQIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDAC 97
RP+ ++++LR + + ++ G E D A +++ Y+ G + A
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH--SAM 242
Query: 98 CVFHDLL-ERDLV----AWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK 152
F+ + ER ++ +N M+S + V L+ EM E EG+ P+ T+ ++
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVE-EGVPPNEFTYTLVVS 301
Query: 153 CCSTLG---EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFV 209
+ G E ++ G G + V S+++ L K GD
Sbjct: 302 SYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD------------------ 343
Query: 210 WSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMI 269
W E+A+ ++DM Q + P + ++ L + E+ + + M
Sbjct: 344 W-------------EKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADME 390
Query: 270 KNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSM 329
+N D + +++ +Y G DA+ +F + +++A LA +Q+ S +
Sbjct: 391 RNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVV 450
Query: 330 QLLQ--ELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALV 387
+ L E+ +T + + I +L+ ++ + + K+ + + N ++
Sbjct: 451 KALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSC-NDML 509
Query: 388 HMYSECGQIGDAFKAF-----VDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGI 442
++Y+ +G+ K F VD V D + + + Y + GM +EA +L +M E
Sbjct: 510 NLYTRL-NLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREAR 568
Query: 443 TFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKK 502
+ + + ++ + I V K A+ + DV ++++ K G++ ++K
Sbjct: 569 VKDNR----FVQTLAESMHI-VNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKA 623
Query: 503 VFDAQVKPN--EVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHA 560
+ + K + N +I + G +A I ++ + G+ + T +++
Sbjct: 624 ILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQ 683
Query: 561 GYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK------DGSESA 614
+++ L+ + P ++DAY R G LE+AY + + D
Sbjct: 684 HKLKEAKRLY--LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVT 741
Query: 615 WRTLLSACRNHNNTKIGEKSAKKMIELNPS-DHASYILLSNIYIEEGKWEEARDCREKMA 673
L++A N + E ++ +E N D Y L +E GK + A + E+M
Sbjct: 742 ISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMH 801
Query: 674 KTGV 677
+GV
Sbjct: 802 TSGV 805
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 142/339 (41%), Gaps = 48/339 (14%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACA--------- 52
P ++V+ ++I +++R G + A+ LF + P T S+L+ A
Sbjct: 702 PGKSVIR--SMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAE 759
Query: 53 ----TPALWNVGLQIHG--VLVRSGLERDKFAGSSLVY--MYSN---------------- 88
T N+ L G L+++ LE K +S +Y M+++
Sbjct: 760 HISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY 819
Query: 89 -NGSNLRDACCVFHDL----LERDLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPD 143
G L A +F + L D + MI + + G LFSEM + +G+KP
Sbjct: 820 GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQK-KGIKPG 878
Query: 144 NRTFVSLLKCCSTLG---EVMQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFD 200
++ ++K C+T EV ++ + G TD ++ +YA+ + K
Sbjct: 879 TPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTIT 938
Query: 201 SMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIE 256
++EK + +SS++S EEA + M + + PD + L+ +
Sbjct: 939 LVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCG 998
Query: 257 DLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
D G+ + +MI++ ++D FV+SV+ LY G +D
Sbjct: 999 DAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGKEQD 1037
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 225/529 (42%), Gaps = 59/529 (11%)
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTF---VSLLKCCSTLGEVMQIHGLASKFGAET 174
FA GD+ RLF M KP+ + +SLL L + +++ G
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNN---RG----EEAV 227
+A+++ Y + G + ++ D M K+ + SI++ TV N RG E +
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRM--KNEKISPSILTYNTVINACARGGLDWEGLL 232
Query: 228 HFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLT-- 285
F +M + ++PD ++ L AC G+ +M+ ND + L T
Sbjct: 233 GLFAEMRHEGIQPDIVTYNTLLSACA-----IRGLGDEAEMVFR-TMNDGGIVPDLTTYS 286
Query: 286 -LYANFGGLRDAEKLFRRIDD-------KDIVAWNSMILAHAQLGQGSSRSMQLLQELHR 337
L FG LR EK+ + + DI ++N ++ A+A+ G +M + ++
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS-IKEAMGVFHQMQA 345
Query: 338 T--TSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECG 394
T + L+ + D+ RQ+ L MKSS + P N L+ ++ E G
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDV---RQLF-LEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 395 QIGDAFKAFVDIVCK----DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLP 450
+ F D+V + D ++ II + G+ +A ++ + M A I +S +
Sbjct: 402 YFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYT 461
Query: 451 LCISSCSQ-------LLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKV 503
I + Q L+A N + G N + S++ +A+ G +++S+ +
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEV-------GSNPSIETFHSLLYSFARGGLVKESEAI 514
Query: 504 F----DAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSH 559
D+ + N +NA I Y G+ ++A++ + +EK+ P++ T A+LS S
Sbjct: 515 LSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSF 574
Query: 560 AGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
A +++ F M I P Y ++ YG+ R ++ +++++
Sbjct: 575 ARLVDECREQFEEM-KASDILPSIMCYCMMLAVYGKTERWDDVNELLEE 622
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 94/475 (19%), Positives = 178/475 (37%), Gaps = 100/475 (21%)
Query: 5 NVVTWTTLISSHLRAG-SVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQI 63
+++T+ T+I++ R G LF +MR +P+ T++ LL ACA L + +
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 269
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLE----RDLVAWNVMISGFA 119
+ G+ D S LV + L C + ++ D+ ++NV++ +A
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETFGKL-RRLEKVCDLLGEMASGGSLPDITSYNVLLEAYA 328
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVS 179
+ G +F +M + G P+ T+
Sbjct: 329 KSGSIKEAMGVFHQM-QAAGCTPNANTY-------------------------------- 355
Query: 180 SAMVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
S +++L+ + G R++F M+ + D ++ +I + +E V F DM +
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL-R 294
+ ++PD + AC + GGL
Sbjct: 416 ENIEPDMETYEGIIFACGK------------------------------------GGLHE 439
Query: 295 DAEKLFRRIDDKDIV----AWNSMILAHAQ--LGQGSSRSMQLLQELHRTTSLQIQGATL 348
DA K+ + + DIV A+ +I A Q L + + + + E+ S++ T
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE----TF 495
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI-- 406
++L S + I S ++ S + NA + Y + G+ +A K +VD+
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 407 -VC-KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQL 459
C D+ + +++ Y + E E +EM A I LP + C L
Sbjct: 556 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDI------LPSIMCYCMML 604
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/485 (18%), Positives = 208/485 (42%), Gaps = 22/485 (4%)
Query: 108 LVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKC-C--STLGEVMQIH 164
+ +N ++S A++ F +V L +M + G+ + T+ L+ C C S + + +
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALL 143
Query: 165 GLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVN 220
G K G E V S++++ Y +S + D M E D ++++I G ++
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 221 NRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVA 280
N+ EAV M ++ +P+ + + D++ + +M + + +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 281 SVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELH 336
S ++ + DA LF +++K +++ ++S+I + S S L +
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 337 RTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQI 396
R + + T A++ + + L +++ ++K S+ ++L++ + ++
Sbjct: 324 RKINPNV--VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 397 GDAFKAFVDIVCKD----DSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLC 452
+A F ++ KD +++++I + + E +EL +EM G+ + +
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 453 ISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFD----AQV 508
I Q + + + G + ++ ++++D K G +E + VF+ +++
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 509 KPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLN 568
+P YN MI G G+ + ++F L GV P+ + + M+S G E+
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 569 LFTLM 573
LF M
Sbjct: 562 LFRKM 566
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/572 (19%), Positives = 233/572 (40%), Gaps = 78/572 (13%)
Query: 9 WTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVLV 68
+ ++ + L + + A LF M P+ + F+ LL A A +++ + + +
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 69 RSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLL----ERDLVAWNVMISGFAQVGDF 124
R G+ + + + L+ + S + A + ++ E +V + +++G+
Sbjct: 113 RLGISHNLYTYNILINCFCRR-SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAVVSSA 181
L +M E+ G +PD TF +L+ + + L + G + + V
Sbjct: 172 SDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 182 MVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
+V+ K GD+ + + ME E + ++S++I ++A++ F +M +
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
V+P+ SS + E + ++ MI+ + + L+ + G L +AE
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 298 KLF----RRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILK 353
KL+ +R D DI ++S+I G + L
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLI----------------------------NGFCMHDRLD 382
Query: 354 SCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDI----VC 408
K+ +L M S P +V N L++ + + +I + + F ++ +
Sbjct: 383 EAKHMFEL----------MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGI-----TFTSYSLPLCISSCSQLLAIN 463
+ +++++I + Q A + K+M+++G+ T+ + LC +
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG-------K 485
Query: 464 VGKQFHVFAI--KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA----QVKPNEVIYNA 517
+ K VF +S +Y + +I+ K G +ED +F + VKP+ +IYN
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 518 MICGYAHHGQAKQAIEIFTMLEKNGVTPNQVT 549
MI G+ G ++A +F + ++G P+ T
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 160/352 (45%), Gaps = 24/352 (6%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++VT ++L++ + + A L + M M RP+ TF+ L+ + + +
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL-------LERDLVAWNVMISG 117
+V+ G + + +V G D F+ L +E ++V ++ +I
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRG----DIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAET 174
+ LF+EM E +G++P+ T+ SL+ C L S
Sbjct: 270 LCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFF 230
+ V +A++D + K G + K++D M ++ D F +SS+I+G+ +++R +EA H F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
+ M + P+ ++ + + + ++ GV++ +M + G + + L+ +
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 291 GGLRDAEKLFRR-IDD---KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRT 338
+A+ +F++ + D +I+ +N+++ + G+ ++M + + L R+
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQRS 499
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 138/329 (41%), Gaps = 17/329 (5%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P ++ + L+S+ + L M+ + N YT+++L+ + ++ L
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISG 117
+ G +++ G E SSL+ Y +G + DA + ++E D + + +I G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYC-HGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 118 FAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGA---ET 174
L M + G +P+ T+ ++ G++ L +K A E
Sbjct: 200 LFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 175 DAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFF 230
+ V+ S ++D K +F ME K + +SS+IS R +A
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 231 KDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANF 290
DM ++++ P+ ++ + A V+ L +++ +MIK D F S L+ +
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 291 GGLRDAEKLFRRIDDKD----IVAWNSMI 315
L +A+ +F + KD +V +N++I
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 127/333 (38%), Gaps = 52/333 (15%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
NVV ++T+I S + A LF +M RPN T+S L+ W+
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS------ 312
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQ 120
DA + D++ER ++V +N +I F +
Sbjct: 313 ------------------------------DASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK--CC-STLGEVMQIHGLASKFGAETDAV 177
G ++L+ EM + + PD T+ SL+ C L E + L + V
Sbjct: 343 EGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ +++ + K + ++F M ++ + ++++I G+ + A FK M
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
V P+ ++ L + L + V + ++ + + ++++ G +
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 294 RDAEKLFRRIDDK----DIVAWNSMILAHAQLG 322
D LF + K D++ +N+MI + G
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 123/592 (20%), Positives = 222/592 (37%), Gaps = 80/592 (13%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P V +I +R A L+ M + N Y+F++L++ + L
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSL 161
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQV 121
G L + G + D ++L+ H L D ++ + + G+
Sbjct: 162 STFGKLTKLGFQPDVVTFNTLL-----------------HGLCLEDRISEALALFGYMVE 204
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAVV 178
F LF +M E+ GL P TF +L+ G V++ L +K G D V
Sbjct: 205 TGFLEAVALFDQMVEI-GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
+V+ K GD S + MEE D ++S+II + +A + F +M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
++ + P+ + + + ++ MI+ D + L++ G L
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 295 DAEKL----FRRIDDKDIVAWNSMILAHAQLGQ-GSSRSMQLLQELHRTTSLQIQGATLI 349
+AEKL R D V +NSMI + + ++ M L + T+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN----TII 439
Query: 350 AILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI--- 406
+ C+ K + G Q+ + + + T N L+H + E + A F ++
Sbjct: 440 DVY--CRAKR-VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 407 -VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVG 465
VC D + + ++ + +N EALEL
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALEL-------------------------------- 524
Query: 466 KQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA----QVKPNEVIYNAMICG 521
F V + S + D + II K ++++ +F + V+P+ YN MI G
Sbjct: 525 --FEVIQM-SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 522 YAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM 573
+ A +F ++ NG P+ T+ ++ C AG I+ ++ L + M
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 190/458 (41%), Gaps = 48/458 (10%)
Query: 6 VVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHG 65
V+T+ TLI+ G V +A L N M + T+ ++ L +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 66 VLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQV 121
+ + ++ D S+++ +G + DA +F ++LE+ ++ +N MI GF
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHH-SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAE---TDAVV 178
G + QRL +M E E + PD TF +L+ G++ + L + D V
Sbjct: 345 GRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRV 238
++M+ + K + +FD M D +++II Y R +E + +++ ++ +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 239 KPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEK 298
+ ++ + E+++LN + +MI +G D ++LL + L +A +
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 299 LFRRID----DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKS 354
LF I D D VA+N +I G + ++ + SL I G
Sbjct: 524 LFEVIQMSKIDLDTVAYNIII-------HGMCKGSKVDEAWDLFCSLPIHGV-------- 568
Query: 355 CKNKSDLPA-GRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDSS 413
+ D+ I KS++S N L H + G D+S+
Sbjct: 569 ---EPDVQTYNVMISGFCGKSAISD----ANVLFHKMKDNGHE------------PDNST 609
Query: 414 WSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPL 451
++++I + G +++EL EM + G + ++++ +
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 128/296 (43%), Gaps = 17/296 (5%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+V+T+ LIS+ ++ G + +A +L ++M P+ T++ ++ ++ +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVA----WNVMISGFAQ 120
++ D ++++ +Y + + + ++ R LVA +N +I GF +
Sbjct: 425 DLMASP----DVVTFNTIIDVYCR-AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTF-VSLLKCCST--LGEVMQIHGLASKFGAETDAV 177
V + Q LF EM G+ PD T + L C L E +++ + + D V
Sbjct: 480 VDNLNAAQDLFQEMIS-HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ ++ K V +F S+ E D ++ +ISG+ + +A F M
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYAN 289
+PD ++ +R C++ +++ +++ +M NG D F ++ L +
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITD 654
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/425 (17%), Positives = 171/425 (40%), Gaps = 36/425 (8%)
Query: 211 SSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIK 270
+ +I + NR + A+ ++ M +R+ + + + ++ + L+ + G++ K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 271 NGHQNDCFVASVLL----------TLYANFG-----GLRDAEKLFRRIDD----KDIVAW 311
G Q D + LL A FG G +A LF ++ + ++ +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 312 NSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLV 371
N++I + +G L L I T I+ D + + S +
Sbjct: 230 NTLI--NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 372 MKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVCKDDS----SWSSIIGTYKQNGME 427
++ + ++ +A++ + G DA F +++ K + +++ +I + G
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 428 SEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNH-----DVY 482
S+A L ++M+ I + IS+ ++ GK F + H D
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISA-----SVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 483 VGSSIIDMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG 542
+S+I + K +D+K +FD P+ V +N +I Y + + +++ + + G
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 543 VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEA 602
+ N T+ ++ + +LF M+ + + P++ + L+ + +LEEA
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 603 YQIVQ 607
++ +
Sbjct: 522 LELFE 526
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 196/429 (45%), Gaps = 45/429 (10%)
Query: 226 AVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLT 285
A + FK+M + +V P+ + +R +++ + + +M G + + L+
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 286 LYANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSL 341
Y + D KL R + K +++++N +I + G+ S L + R SL
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 342 -QIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAF 400
++ TLI CK + + +H+ +++ ++ + +L+H + G + A
Sbjct: 309 DEVTYNTLIK--GYCK-EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 401 KAFVDI-----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEG-----ITFTSYSLP 450
+ F+D +C ++ ++++++ + Q G +EA + +EM G +T+ +
Sbjct: 366 E-FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 451 LCISSCSQLLAINVGKQFHVFAI-----KSGYNHDVYVGSSIIDMYAKCGHMEDSKKV-- 503
C++ GK A+ + G + DV S+++ + + ++++ +V
Sbjct: 425 HCVT----------GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 504 --FDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG 561
+ +KP+ + Y+++I G+ + K+A +++ + + G+ P++ T+ A+++A G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 562 YIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK------DGSESAW 615
+E L L M+ K + P+ YS L++ + R EA +++ K S+ +
Sbjct: 535 DLEKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 616 RTLLSACRN 624
TL+ C N
Sbjct: 594 HTLIENCSN 602
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/561 (18%), Positives = 248/561 (44%), Gaps = 47/561 (8%)
Query: 92 NLRDACCVFHDLLER----DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTF 147
N+ A VF ++LE ++ +N++I GF G+ + LF +M E +G P+ T+
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTY 243
Query: 148 VSLLKCCSTLGEV----MQIHGLASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSME 203
+L+ L ++ + +A K G E + + + +++ + G + + M
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 204 EK----DNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLN 259
+ D ++++I GY +A+ +M + + P +S + + + ++N
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 260 TGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAEKLFRRIDDK----DIVAWNSMI 315
++ QM G + + L+ ++ G + +A ++ R ++D +V +N++I
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 316 LAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSS 375
H G+ ++ +L+++ + L + +L D+ ++ +++
Sbjct: 423 NGHCVTGKMED-AIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 376 VSHPTLVGNALVHMYSECGQIGDAFKAFVDIV----CKDDSSWSSIIGTYKQNGMESEAL 431
+ T+ ++L+ + E + +A + +++ D+ +++++I Y G +AL
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 432 ELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ-----FHVFAIKSGYNHDVYVGS- 485
+L EM+ +G+ + + I+ ++ K+ F+ ++ S + + +
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 486 ---------SIIDMYAKCGHMEDSKKVFDAQV----KPNEVIYNAMICGYAHHGQAKQAI 532
S+I + G M ++ +VF++ + KP+ YN MI G+ G ++A
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 533 EIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDA 592
++ + K+G + VT +A++ A G + + ++ +L ++ E+E LV+
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS-EAEQAKVLVEI 719
Query: 593 YGRAGRLEEAYQIV---QKDG 610
R G ++ ++ KDG
Sbjct: 720 NHREGNMDVVLDVLAEMAKDG 740
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 199/459 (43%), Gaps = 47/459 (10%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRA-CATPALWNVGLQI 63
NVVT+ TLI + + + F+L M + PN +++V++ C + V +
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 64 HGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDL----VAWNVMISGFA 119
+ R G D+ ++L+ Y G N A + ++L L + + +I
Sbjct: 299 TE-MNRRGYSLDEVTYNTLIKGYCKEG-NFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 120 QVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDA 176
+ G+ +M V GL P+ RT+ +L+ S G + + + + + G
Sbjct: 357 KAGNMNRAMEFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV 415
Query: 177 VVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKD 232
V +A+++ + G + + + M+EK D +S+++SG+ + +EA+ ++
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Query: 233 MCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGG 292
M ++ +KPD SS ++ E ++ +M++ G D F + L+ Y G
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 293 LRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSR-SMQLLQELHRTTSLQIQGAT 347
L A +L + +K D+V ++ +L + Q +R + +LL +L S+ T
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYS--VLINGLNKQSRTREAKRLLLKLFYEESVP-SDVT 592
Query: 348 LIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV 407
++++C N + KS VS L+ + G + +A + F ++
Sbjct: 593 YHTLIENCSN------------IEFKSVVS--------LIKGFCMKGMMTEADQVFESML 632
Query: 408 CK----DDSSWSSIIGTYKQNGMESEALELCKEMLAEGI 442
K D ++++ +I + + G +A L KEM+ G
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 33/275 (12%)
Query: 410 DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFH 469
D+ +++++I Y + G +AL + EML G+T + + I S + +N +F
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 470 VFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICGYAHH 525
G + ++++D +++ G+M ++ +V D P+ V YNA+I G+
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 526 GQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEH 585
G+ + AI + +++ G++P+ V++ +LS + +++ L + M+ K IKP++
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTIT 487
Query: 586 YSCLVDAYGRAGRLEEAYQIVQKDGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPSD 645
YS L+ + R +EA D E R L P D
Sbjct: 488 YSSLIQGFCEQRRTKEAC-----DLYEEMLRVGL-----------------------PPD 519
Query: 646 HASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
+Y L N Y EG E+A +M + GV D
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 129/633 (20%), Positives = 260/633 (41%), Gaps = 40/633 (6%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
T+ LI++H RAG A L +DM P+ T++ L+ AC + W L++ +
Sbjct: 48 TYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKM 107
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDL----LERDLVAWNVMISGFAQVGD 123
+G+ D + ++ Y +G A F + + D +N++I +++G
Sbjct: 108 TDNGVGPDLVTHNIVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 166
Query: 124 FCMVQRLFSEMWEVEG-LKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAE---TDAVVS 179
LF+ M E +PD TF S++ S GE+ + AE + V
Sbjct: 167 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 180 SAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDMCK 235
+A++ YA G + + +++ D ++ +++ Y + + +A F M K
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 286
Query: 236 QRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRD 295
+R KP+ ++ + A L V++ QM ++G + + LL + +
Sbjct: 287 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 346
Query: 296 AEKLFRRIDDKDI----VAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIAI 351
+ + + I A+NS I ++ + +++ L Q + R ++ T +
Sbjct: 347 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAE-LEKAIALYQSM-RKKKVKADSVTFTIL 404
Query: 352 LKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIV---C 408
+ S P + S+ V ++++ YS+ GQ+ +A F + C
Sbjct: 405 ISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 464
Query: 409 KDDS-SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ 467
+ D +++S++ Y + +A EL EM A GI P I+ + + A N G Q
Sbjct: 465 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE------PDSIACSALMRAFNKGGQ 518
Query: 468 -FHVFAIKSGYNHD--VYVGSSIIDMYAKCGHMEDSKKVFDA-----QVKPNEVI--YNA 517
+VF + + G+ ++++ C +++ K+ D P+ I N
Sbjct: 519 PSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQ 578
Query: 518 MICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKY 577
M+ + G+ + +++F + +GV N T+ +L G + + M
Sbjct: 579 MLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWM-SGA 637
Query: 578 KIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDG 610
I+P ++ Y ++ R+ +E I QK G
Sbjct: 638 GIQPSNQMYRDIISFGERSAGIEFEPLIRQKLG 670
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 113/532 (21%), Positives = 221/532 (41%), Gaps = 106/532 (19%)
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEE----KDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ + M+ L+A+ V R +F M++ D + ++I+ + + A++ DM
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
+ + P + ++ + AC + ++V +M NG D +++L+ Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 294 RDAEKLFRRIDD----KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLI 349
A F + D +N +I ++LGQ SS+++ L
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ-SSQALDLF----------------- 174
Query: 350 AILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVC 408
+S+ K + P +V +++H+YS G+I + F +V
Sbjct: 175 ------------------NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 409 K----DDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINV 464
+ + S+++++G Y +GM AL + ++ GI +P
Sbjct: 217 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI------IP-------------- 256
Query: 465 GKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMIC 520
DV + +++ Y + +K+VF + KPN V YNA+I
Sbjct: 257 ---------------DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALID 301
Query: 521 GYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLM--LYKYK 578
Y +G +A+EIF +E++G+ PN V+ +L+ACS + + +N+ T++
Sbjct: 302 AYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS---KKKVNVDTVLSAAQSRG 358
Query: 579 IKPESEHYSCLVDAYGRAGRLEEAYQIVQ-----KDGSESAWRTLL--SACRNHNNTKIG 631
I + Y+ + +Y A LE+A + Q K ++S T+L +CR +K
Sbjct: 359 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR---MSKYP 415
Query: 632 EKSA--KKMIELN-PSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
E + K+M +L+ P Y + Y ++G+ EA +M G + D
Sbjct: 416 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 467
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 181/420 (43%), Gaps = 23/420 (5%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+VVT+T+++ + G + +F M +PN +++ L+ A A + L +
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER---DLVAWNVMISGFAQV 121
G + ++G+ D + + L+ Y + + ER ++V +N +I +
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 122 GDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGL---ASKFGAETDAVV 178
G +F +M E +G+KP+ + +LL CS + + + + A G +
Sbjct: 307 GFLAEAVEIFRQM-EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 365
Query: 179 SSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDMC 234
++ + Y ++ ++ SM +K D+ ++ +ISG ++ EA+ + K+M
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Query: 235 KQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLR 294
+ + V SS L A + + + QM G + D + +L Y
Sbjct: 426 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 485
Query: 295 DAEKLFRRID----DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGATLIA 350
A +LF ++ + D +A ++++ A + GQ S ++ +L +L R + GA
Sbjct: 486 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPS--NVFVLMDLMREKEIPFTGAVFFE 543
Query: 351 ILKSCKNKSDLPAGRQIHSLVMKSSVSHPTL---VGNALVHMYSECGQIGDAFKAFVDIV 407
I +C + L ++ L+ P+L + N ++H++ + G++ K F I+
Sbjct: 544 IFSAC---NTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKII 600
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 126/594 (21%), Positives = 227/594 (38%), Gaps = 121/594 (20%)
Query: 2 PHRNVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGL 61
P ++ ++ L S R L M + N YT S+++ C ++
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 62 QIHGVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER--------DLVAWNV 113
G +++ G E D S+L+ NG L +L++R L+ N
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLI-----NGLCLEGRVSEALELVDRMVEMGHKPTLITLNA 182
Query: 114 MISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEV---MQIHGLASKF 170
+++G G L M E G +P+ T+ +LK G+ M++ +
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 171 GAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEA 226
+ DAV S ++D K G + + +F+ ME K D +++++I G+ R ++
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 227 VHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTL 286
+DM K+++ PD S+ + DCFV
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALI--------------------------DCFVKE----- 330
Query: 287 YANFGGLRDAEKLFRRIDDK----DIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQ 342
G LR+AE+L + + + D V + S+I G + QL + H
Sbjct: 331 ----GKLREAEELHKEMIQRGISPDTVTYTSLI-------DGFCKENQLDKANHMLD--- 376
Query: 343 IQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKA 402
+ + K C G I + N L++ Y + I D +
Sbjct: 377 ------LMVSKGC--------GPNIRTF-------------NILINGYCKANLIDDGLEL 409
Query: 403 FVDI----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGIT--FTSYSL---PLCI 453
F + V D +++++I + + G A EL +EM++ + SY + LC
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 454 SSCSQLLAINVGKQFHVFAI--KSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDA----Q 507
+ + K +F KS D+ + + II ++D+ +F +
Sbjct: 470 NGEPE-------KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 508 VKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAG 561
VKP+ YN MI G G +A +F +E++G +PN T+ ++ A H G
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA--HLG 574
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 161/349 (46%), Gaps = 20/349 (5%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+ V ++ +I + GS+ AF LFN+M + + + ++ L+R W+ G ++
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLER----DLVAWNVMISGFAQ 120
+++ + D A S+L+ + G LR+A + ++++R D V + +I GF +
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEG-KLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLK--CCSTL-GEVMQIHGLASKFGAETDAV 177
+ M +G P+ RTF L+ C + L + +++ S G D V
Sbjct: 365 ENQLDKANHMLDLMVS-KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 178 VSSAMVDLYAKCGDVSSCRKIFDSMEEK----DNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ ++ + + G + +++F M + D + ++ G N E+A+ F+ +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
K +++ D + + + ++ + + G + D ++++ G L
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 294 RDAEKLFRRIDD----KDIVAWNSMILAHAQLGQG-SSRSMQLLQELHR 337
+A+ LFR++++ + +N +I AH LG+G +++S +L++E+ R
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAH--LGEGDATKSAKLIEEIKR 590
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 151/324 (46%), Gaps = 23/324 (7%)
Query: 378 HPTLVG-NALVHMYSECGQIGDAFKAFVDIVCK-----DDSSWSSIIGTYKQNGMESEAL 431
PTL+ NALV+ G++ DA +D + + ++ ++ ++ ++G + A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAV-LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 432 ELCKEMLAEGITFTSYSLPLCISS-CSQLLAINVGKQFHVFAIKSGYNHDVYVGSSIIDM 490
EL ++M I + + I C N F+ IK G+ D+ + +++I
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIIIYTTLIRG 291
Query: 491 YAKCGHMEDSKKVFDAQVK----PNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPN 546
+ G +D K+ +K P+ V ++A+I + G+ ++A E+ + + G++P+
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 547 QVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIV 606
VT+ +++ ++ ++ LM+ K P ++ L++ Y +A +++ ++
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 607 QK------DGSESAWRTLLSACRNHNNTKIGEKSAKKMI--ELNPSDHASYILLSNIYIE 658
+K + TL+ ++ ++ ++M+ + P D SY +L + +
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP-DIVSYKILLDGLCD 469
Query: 659 EGKWEEARDCREKMAKTGVKKDPG 682
G+ E+A + EK+ K+ ++ D G
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIG 493
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 187/474 (39%), Gaps = 65/474 (13%)
Query: 232 DMCKQR----VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLY 287
D+CKQ + + + LS + C L+ G++IK G++ D S L+
Sbjct: 93 DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
Query: 288 ANFGGLRDAEKLFRRIDD----KDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQI 343
G + +A +L R+ + ++ N+++ + G LL + T Q
Sbjct: 153 CLEGRVSEALELVDRMVEMGHKPTLITLNALV--NGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 344 QGATLIAILKS-CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFK- 401
T +LK CK S T + L+ E DA K
Sbjct: 211 NEVTYGPVLKVMCK--------------------SGQTALAMELLRKMEERKIKLDAVKY 250
Query: 402 -AFVDIVCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLL 460
+D +CKD S + + N ME + + A+ I +T+ C +
Sbjct: 251 SIIIDGLCKD-GSLDNAFNLF--NEMEIKGFK------ADIIIYTTLIRGFCYAG----- 296
Query: 461 AINVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDS----KKVFDAQVKPNEVIYN 516
+ G + IK DV S++ID + K G + ++ K++ + P+ V Y
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 517 AMICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYK 576
++I G+ Q +A + ++ G PN TF +++ A I+D L LF M +
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 577 YKIKPESEHYSCLVDAYGRAGRLEEAYQIVQKDGSES------AWRTLLSA-CRNHNNTK 629
+ ++ Y+ L+ + G+LE A ++ Q+ S +++ LL C N K
Sbjct: 417 -GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 630 ---IGEKSAKKMIELNPSDHASYILLSNIYIEEGKWEEARDCREKMAKTGVKKD 680
I EK K +EL D Y ++ + K ++A D + GVK D
Sbjct: 476 ALEIFEKIEKSKMEL---DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 109/514 (21%), Positives = 215/514 (41%), Gaps = 63/514 (12%)
Query: 67 LVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDL------VAWNVMISGFAQ 120
+++ G D G+SL+ + G NLRDA VF D++ +++ V+++++I G +
Sbjct: 221 ILKIGFVLDSHIGTSLLLGFCR-GLNLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKF---GAETDAV 177
VG L +M E +G +P RT+ L+K G + + L + G + +
Sbjct: 279 VGRLEEAFGLKDQMGE-KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 178 VSSAMVDLYAKCGDVSS----CRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDM 233
+ ++D + G + CRK+ ++++I+GY + R A M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 234 CKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGL 293
K+ KP+ + + + V + +M+ NG D +VL+ G +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 294 RDAEKLFRRID----DKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSL-QIQGATL 348
A KL ++ + D + + ++I A + G+ S L L + SL ++ G TL
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 349 IAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDIVC 408
I CK A + +LV ++ P + N ++ M S+ ++ +
Sbjct: 518 ID--GVCKVGKTRDALFILETLVKMRILTTPHSL-NVILDMLSKGCKVKEEL-------- 566
Query: 409 KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQF 468
+++G + G+ +T+T+ L S ++ F
Sbjct: 567 -------AMLGKINKLGLVPSV-----------VTYTTLVDGLIRSG-------DITGSF 601
Query: 469 HVFAIK--SGYNHDVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICGY 522
+ + SG +VY + II+ + G +E+++K+ D+ V PN V Y M+ GY
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 523 AHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSA 556
++G+ +A+E + + G N + ++L
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 17/264 (6%)
Query: 355 CKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAF----VDIVCKD 410
CKN A S ++K + +G +L+ + + DA K F ++ C
Sbjct: 206 CKNGYT-EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAP 264
Query: 411 DS-SWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISS-CSQLLAINVGKQF 468
+S S+S +I + G EA L +M +G ++ + + I + C + L + K F
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL---IDKAF 321
Query: 469 HVF--AIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVFDAQVK----PNEVIYNAMICGY 522
++F I G +V+ + +ID + G +E++ V VK P+ + YNA+I GY
Sbjct: 322 NLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY 381
Query: 523 AHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPE 582
G+ A E+ T++EK PN TF ++ G ++L ML + P+
Sbjct: 382 CKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML-DNGLSPD 440
Query: 583 SEHYSCLVDAYGRAGRLEEAYQIV 606
Y+ L+D R G + AY+++
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLL 464
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 136/333 (40%), Gaps = 52/333 (15%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
++V++ LI R G + A++L + M D P+ TF+ ++ A +V
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLV----AWNVMISGFAQ 120
G+++R G+ D+ G++L+ G RDA + L++ ++ + NV++ ++
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKT-RDALFILETLVKMRILTTPHSLNVILDMLSK 558
Query: 121 VGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAETDAVVSS 180
C V+ E + + G +K G V +
Sbjct: 559 ---GCKVK------------------------------EELAMLGKINKLGLVPSVVTYT 585
Query: 181 AMVDLYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQ 236
+VD + GD++ +I + M+ + + ++ II+G R EEA M
Sbjct: 586 TLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Query: 237 RVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQ-NDCFVASVLLTLYANFGGLRD 295
V P+ + ++ V L+ ++ M++ G++ ND +S+L + G+ +
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDN 705
Query: 296 AEK------LFRRIDDKDIVAWNSMILAHAQLG 322
+E+ R D + I N +I QLG
Sbjct: 706 SEESTVSDIALRETDPECI---NELISVVEQLG 735
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 41/249 (16%)
Query: 8 TWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIHGVL 67
T+T LI + G + KAF LF++M +PN +T++VL+
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLI------------------- 343
Query: 68 VRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDFCMV 127
GL RD + NG + + D + ++ +N +I+G+ + G
Sbjct: 344 --DGLCRDG-------KIEEANGVCRK----MVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 128 QRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQ-IHGLASKF--GAETDAVVSSAMVD 184
L + M E KP+ RTF L++ +G+ + +H L G D V + ++D
Sbjct: 391 FELLTVM-EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 185 LYAKCGDVSSCRKIFDSME----EKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQRVKP 240
+ G +++ K+ SM E D +++II+ + + + A F M ++ +
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 241 DQHVLSSTL 249
D+ V +TL
Sbjct: 510 DE-VTGTTL 517
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 429 EALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSSII 488
EA+E+ + +G L C + A+ + H I DV ++II
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 489 DMYAKCGHMEDSKKVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNGVTPNQV 548
+MY+ C ++D+ KVF+ + N M+ + ++G ++AI++FT ++ G PN
Sbjct: 162 EMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGE 221
Query: 549 TFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
F + S C+ G +++ F M +Y I P EHY + +G L+EA V++
Sbjct: 222 IFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVER 281
Query: 609 ---DGSESAWRTLLSACRNHNNTKIGEKSAKKMIELNPS 644
+ S W TL++ R H + ++G++ A+ + +L+ +
Sbjct: 282 MPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDAT 320
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 111/627 (17%), Positives = 262/627 (41%), Gaps = 60/627 (9%)
Query: 5 NVVTWTTLISSHLRAGSVPKAFQLFNDMRVMDERPNEYTFSVLLRACATPALWNVGLQIH 64
+VVT++++I+ + G V + L +M M PN T++ L+ + ++ L ++
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317
Query: 65 GVLVRSGLERDKFAGSSLVYMYSNNGSNLRDACCVFHDLLERDLVAWNVMISGFAQVGDF 124
+V G+ D LV + V++ G + GD
Sbjct: 318 SQMVVRGIPVD--------------------------------LVVYTVLMDGLFKAGDL 345
Query: 125 CMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGLASKFGAET---DAVVSSA 181
++ F + E + P+ T+ +L+ G++ + ++ ++ + V S+
Sbjct: 346 REAEKTFKMLLE-DNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 182 MVDLYAKCG----DVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEAVHFFKDMCKQR 237
M++ Y K G VS RK+ D + F + ++I G + E A+ K+M
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 238 VKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTLYANFGGLRDAE 297
V+ + ++L + + I + + M+ G D + L+ ++ G A
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAAL 524
Query: 298 KLFRRIDDK----DIVAWNSMILAHAQLGQ-GSSRSMQLLQELHRTTSLQIQGATLIAIL 352
+ ++ D+V++N +I + G+ G+ + + ++E ++ AT ++
Sbjct: 525 AWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMRE----KGIEPDIATFNIMM 580
Query: 353 KSCKNKSDLPAGRQIHSLVMKSSVSHPTLVG-NALVHMYSECGQIGDAFKAFVDIVC--- 408
S + + D ++ MKS P+L+ N +V M E G++ +A ++
Sbjct: 581 NSQRKQGDSEGILKLWD-KMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 409 -KDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQ 467
+ +++ + T ++ + + +L+ GI + I++ +L
Sbjct: 640 HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAM 699
Query: 468 FHVFAIKSGYNHDVYVGSSIIDMYAKCGHMEDSKKVF----DAQVKPNEVIYNAMICGYA 523
G+ D +S++ Y H+ + + +A + PN YN +I G +
Sbjct: 700 VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 524 HHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPES 583
G K+ + + ++ G+ P+ T+ A++S + G ++ ++ ++ M+ + P++
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD-GLVPKT 818
Query: 584 EHYSCLVDAYGRAGRLEEAYQIVQKDG 610
Y+ L+ + G++ +A +++++ G
Sbjct: 819 STYNVLISEFANVGKMLQARELLKEMG 845
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 196/510 (38%), Gaps = 79/510 (15%)
Query: 107 DLVAWNVMISGFAQVGDFCMVQRLFSEMWEVEGLKPDNRTFVSLLKCCSTLGEVMQIHGL 166
D V++N +I GF +VG+F + L E+ E ++L+ L +H +
Sbjct: 195 DTVSYNTLIDGFCKVGNFVRAKALVDEISE-----------LNLITHTILLSSYYNLHAI 243
Query: 167 ASKFGAETDAVVSSAMVDLYAKCGDVSSCRKIFDSMEEKDNFVWSSIISGYTVNNRGEEA 226
A D V+S FD D +SSII+ + E
Sbjct: 244 EE---AYRDMVMSG------------------FDP----DVVTFSSIINRLCKGGKVLEG 278
Query: 227 VHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQMIKNGHQNDCFVASVLLTL 286
++M + V P+ ++ + + + + ++ QM+ G D V +VL+
Sbjct: 279 GLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDG 338
Query: 287 YANFGGLRDAEKLFRRIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHRTTSLQIQGA 346
G LR+AEK F+ M+L Q+
Sbjct: 339 LFKAGDLREAEKTFK------------MLLEDNQVP---------------------NVV 365
Query: 347 TLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGNALVHMYSECGQIGDAFKAFVDI 406
T A++ DL + I + +++ SV + +++++ Y + G + +A +
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 407 ----VCKDDSSWSSIIGTYKQNGMESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAI 462
V + ++ ++I + G E A+EL KEM G+ +Y L ++ ++ I
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 463 NVGKQFHVFAIKSGYNHDVYVGSSIIDMYAKCGH---MEDSKKVFDAQVKPNEVI-YNAM 518
K + G D +S+ID++ K G + + P +V+ YN +
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545
Query: 519 ICGYAHHGQAKQAIEIFTMLEKNGVTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYK 578
I G G+ M EK G+ P+ TF M+++ G E L L+ M
Sbjct: 546 ISGMLKFGKVGADWAYKGMREK-GIEPDIATFNIMMNSQRKQGDSEGILKLWDKM-KSCG 603
Query: 579 IKPESEHYSCLVDAYGRAGRLEEAYQIVQK 608
IKP + +V G++EEA I+ +
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQ 633
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 165/427 (38%), Gaps = 55/427 (12%)
Query: 226 AVHFFKDMCKQRVKPDQHVLSSTLRACVEIEDLNTGVQVHGQ-------MIKNGHQNDCF 278
A MC V PD + +S I N VH Q MI G D F
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSL------IHQFNVNGLVHDQVSLIYSKMIACGVSPDVF 130
Query: 279 VASVLLTLYANFGGLRDAEKLFR-RIDDKDIVAWNSMILAHAQLGQGSSRSMQLLQELHR 337
+VL+ + G L A L R R+ D V +N++I + G + + Q L E+ +
Sbjct: 131 ALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGL-ADEAYQFLSEMVK 189
Query: 338 TTSLQIQGATLIAILKSCKNKSDLPAGRQIHSLVMKSSVSHPTLVGN-----ALVHMYSE 392
L + I CK + + A + + + ++H L+ + A+ Y +
Sbjct: 190 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRD 249
Query: 393 CGQIG-----DAFKAFVDIVCK---------------------DDSSWSSIIGTYKQNGM 426
G F + ++ +CK + ++++++ + + +
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 309
Query: 427 ESEALELCKEMLAEGITFTSYSLPLCISSCSQLLAINVGKQFHVFAIKSGYNHDVYVGSS 486
AL L +M+ GI + + + + ++ ++ +V ++
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 369
Query: 487 IIDMYAKCGHMEDSK----KVFDAQVKPNEVIYNAMICGYAHHGQAKQAIEIFTMLEKNG 542
++D K G + ++ ++ + V PN V Y++MI GY G ++A+ + +E
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 429
Query: 543 VTPNQVTFLAMLSACSHAGYIEDTLNLFTLMLYKYKIKPESEHY--SCLVDAYGRAGRLE 600
V PN T+ ++ AG E + L M I E +Y LV+ R GR++
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL---IGVEENNYILDALVNHLKRIGRIK 486
Query: 601 EAYQIVQ 607
E +V+
Sbjct: 487 EVKGLVK 493