Miyakogusa Predicted Gene
- Lj2g3v1613100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1613100.1 Non Chatacterized Hit- tr|I1LIB0|I1LIB0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49316 PE,78.38,0,WD40
repeats,WD40 repeat; LETHAL GIANT LARVAE-RELATED,NULL; LETHAL(2) GIANT
LARVAE PROTEIN,NULL; seg,CUFF.37561.1
(760 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35560.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 769 0.0
AT4G35560.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 766 0.0
AT5G05570.2 | Symbols: | transducin family protein / WD-40 repe... 205 1e-52
AT5G05570.1 | Symbols: | transducin family protein / WD-40 repe... 198 9e-51
>AT4G35560.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:16881562-16886878 FORWARD LENGTH=1049
Length = 1049
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/753 (52%), Positives = 524/753 (69%), Gaps = 21/753 (2%)
Query: 1 MFVKKLVEKASIKKIGGNSSDGLKGSDVDPRLIFHQGVPSDGDKVAYDNIQKILAISTKD 60
MFVKKLVE A+ KK GG+SS+GL+ +DV+PR+ H G+PS AYD QKILA+STKD
Sbjct: 1 MFVKKLVEIAA-KKPGGSSSEGLRANDVEPRIALHYGIPSGSHLFAYDPFQKILAVSTKD 59
Query: 61 GRIKLFGKDNSQVLLISSELVPSKFLQFIQNQGILINVTSNNHIEVWDIDRKLLCDVYIV 120
GRIKLFGKD +Q LL+S E S+FL+F+QNQGIL+NV S N IEVWD+D+KLL V++
Sbjct: 60 GRIKLFGKDQTQALLVSEETSTSRFLEFVQNQGILLNVNSKNQIEVWDLDKKLLSHVHVF 119
Query: 121 KAKITCFEVIQHSLYMYFGDSNGNISVLKLHKKPWYVVQMKYIIPLSASYGNPTEVSDDT 180
+IT F V+QH+ Y Y GDS+GN+SV K+ + V+Q++Y IP AS G+P E S+DT
Sbjct: 120 NGEITSFRVMQHTPYFYVGDSSGNVSVFKIEQDSNQVIQLEYTIPYLASNGSPIEASEDT 179
Query: 181 VVTHILPQPAAESQRVLIIFRNGQIILWDIRESKTIARTGGNMSQPLHNESKRVSCACWV 240
V ILPQ AES+R+L++F +G I LWDI+ESK I +TG + + ++K+ +CACWV
Sbjct: 180 SVVSILPQLTAESKRILLVFSSGFIALWDIKESKPILKTG--VHGMVKQDTKKATCACWV 237
Query: 241 CPFGSKVVVGYSNGELFIWSIPSLNRTSGSASDLNSQKTPIFKLNLGYKSDRISIRSVKW 300
CP GS+V VGYSNG++ IWSIPS S +S + I KLNLGYKS++I I S+KW
Sbjct: 238 CPSGSRVSVGYSNGDILIWSIPSKGECSPESSAM------ICKLNLGYKSEKIPIASLKW 291
Query: 301 IYAEGKASRLYVMG-ASNLLQVVLLNEHIESRTIKLGLSLFECCIDME-IIXXXXXXXXX 358
+YAEGKASR+YV+G +SN LQVVLLNE E+R IKLGL + E C DME II
Sbjct: 292 VYAEGKASRVYVIGSSSNSLQVVLLNEQTETRMIKLGLHVSEPCADMEMIIADVNEQSKH 351
Query: 359 XXXXXXXXXXXGHIYLYDDNLIERYLLQSQSKSNPSLPKEVAVKLPLAD-SSITTAKFIS 417
G +Y YDD +IE+YL+QSQSKS+PSLPKE VKLP +D SSIT KF++
Sbjct: 352 KQDFLFVLGKSGRVYAYDDYMIEKYLIQSQSKSSPSLPKETVVKLPFSDSSSITVGKFLT 411
Query: 418 NNPNMFNSKDEDYSQMVKNYPPLIPIETNHKDWINMSSANFTGFSNVKHLYITGHSNGAI 477
N ++ N DEDY+Q+ K+ P +P T K+ + SA+F GF+ VK++YITGH +G I
Sbjct: 412 NPSHLLNLSDEDYAQLAKDAVPFLPFHTVPKE--SSRSAHFPGFTKVKNVYITGHCDGTI 469
Query: 478 TFWDASCPFFIPILQIKQQSDSNFSLSG-IPLTELYFDINSPLLVSGDQSGMVRIIRFKP 536
+ WD +C F I +L +K+Q D + S G LT L++D NS LLVSGD +GMVR+ RFKP
Sbjct: 470 SVWDMTCSFPILVLFLKEQIDQDVSSRGNAALTALHYDSNSRLLVSGDHNGMVRLYRFKP 529
Query: 537 EPY-AFNSFMSLTGGTKKGADHVICSVKLVKTIGAVTCMNIDHISGHLAVGSDQGNVSVI 595
EPY NSF+ G KKG +H++ SVK +K G++TC+ S HLA+GSDQG+VS++
Sbjct: 530 EPYLTENSFIPFQGSLKKGNNHIVQSVKYIKLTGSITCIQKSQNSKHLAIGSDQGHVSLV 589
Query: 596 DMDGPSLLYQKHIASEFSTGIISLQFITCSLNGFEKNILVVGTMDSSVQALHSETGNTLC 655
D++ ++LY KHIAS+ GIISLQF +C + GFEKN+LVV DSSV AL S+TGN +
Sbjct: 590 DIEEANVLYTKHIASDICPGIISLQFESCIVQGFEKNVLVVAMRDSSVFALDSDTGNMIG 649
Query: 656 PESVHPTKPSKALFMQVLDRQRKTIIGSITKDGLSLREGNQIEDATTKQLYVLLCSEKAL 715
+ P KP K L+MQ+LD ++ T + +G + +E+ + +Q VL+CSEKA+
Sbjct: 650 TNMIKPKKPFKVLYMQILDGKQDT-----SGNGFDTSRESTVEEISIRQPSVLVCSEKAI 704
Query: 716 YVYSFEHALQGIKKVLYKKKFHSSSCCWASTFY 748
Y+YS H +QG+KKVL+KKKF SS C ASTFY
Sbjct: 705 YIYSLAHVVQGVKKVLHKKKFSSSPICSASTFY 737
>AT4G35560.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:16881562-16886878 FORWARD LENGTH=1050
Length = 1050
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/754 (52%), Positives = 524/754 (69%), Gaps = 22/754 (2%)
Query: 1 MFVKKLVEKASIKKIGGNSSDGLKGSDVDPRLIFHQGVPSDGDKVAYDNIQKILAISTKD 60
MFVKKLVE A+ KK GG+SS+GL+ +DV+PR+ H G+PS AYD QKILA+STKD
Sbjct: 1 MFVKKLVEIAA-KKPGGSSSEGLRANDVEPRIALHYGIPSGSHLFAYDPFQKILAVSTKD 59
Query: 61 GRIKLFGKDNSQVLLISSELVPSKFLQFIQNQGILINVTSNNHIEVWDIDRKLLCDVYIV 120
GRIKLFGKD +Q LL+S E S+FL+F+QNQGIL+NV S N IEVWD+D+KLL V++
Sbjct: 60 GRIKLFGKDQTQALLVSEETSTSRFLEFVQNQGILLNVNSKNQIEVWDLDKKLLSHVHVF 119
Query: 121 KAKITCFEVIQHSLYMYFGDSNGNISVLKLHKKPWYVVQMKYIIPLSASYGNPTEVSDDT 180
+IT F V+QH+ Y Y GDS+GN+SV K+ + V+Q++Y IP AS G+P E S+DT
Sbjct: 120 NGEITSFRVMQHTPYFYVGDSSGNVSVFKIEQDSNQVIQLEYTIPYLASNGSPIEASEDT 179
Query: 181 VVTHILPQPAAESQRVLIIFRNGQIILWDIRESKTIARTGGNMSQPLHNESKRVSCACWV 240
V ILPQ AES+R+L++F +G I LWDI+ESK I +TG + + ++K+ +CACWV
Sbjct: 180 SVVSILPQLTAESKRILLVFSSGFIALWDIKESKPILKTG--VHGMVKQDTKKATCACWV 237
Query: 241 CPFGSKVVVGYSNGELFIWSIPSLNRTSGSASDLNSQKTPIFKLNLGYKSDRISIRSVKW 300
CP GS+V VGYSNG++ IWSIPS S +S + I KLNLGYKS++I I S+KW
Sbjct: 238 CPSGSRVSVGYSNGDILIWSIPSKGECSPESSAM------ICKLNLGYKSEKIPIASLKW 291
Query: 301 IYAEGKASRLYVMG-ASNLLQVVLLNEHIESRTIKLGLSLFECCIDME-IIXXXXXXXXX 358
+YAEGKASR+YV+G +SN LQVVLLNE E+R IKLGL + E C DME II
Sbjct: 292 VYAEGKASRVYVIGSSSNSLQVVLLNEQTETRMIKLGLHVSEPCADMEMIIADVNEQSKH 351
Query: 359 XXXXXXXXXXXGHIYLYDDNLIERYLLQSQSKSNPSLPKEVAVKLPLAD-SSITTAKFIS 417
G +Y YDD +IE+YL+QSQSKS+PSLPKE VKLP +D SSIT KF++
Sbjct: 352 KQDFLFVLGKSGRVYAYDDYMIEKYLIQSQSKSSPSLPKETVVKLPFSDSSSITVGKFLT 411
Query: 418 NNPNMFNSKDEDYSQMVKNYPPLIPIETNHKDWINMSSANFTGFSNVKHLYITGHSNGAI 477
N ++ N DEDY+Q+ K+ P +P T K+ + SA+F GF+ VK++YITGH +G I
Sbjct: 412 NPSHLLNLSDEDYAQLAKDAVPFLPFHTVPKE--SSRSAHFPGFTKVKNVYITGHCDGTI 469
Query: 478 TFWDASCPFFIPILQIK-QQSDSNFSLSG-IPLTELYFDINSPLLVSGDQSGMVRIIRFK 535
+ WD +C F I +L +K QQ D + S G LT L++D NS LLVSGD +GMVR+ RFK
Sbjct: 470 SVWDMTCSFPILVLFLKEQQIDQDVSSRGNAALTALHYDSNSRLLVSGDHNGMVRLYRFK 529
Query: 536 PEPY-AFNSFMSLTGGTKKGADHVICSVKLVKTIGAVTCMNIDHISGHLAVGSDQGNVSV 594
PEPY NSF+ G KKG +H++ SVK +K G++TC+ S HLA+GSDQG+VS+
Sbjct: 530 PEPYLTENSFIPFQGSLKKGNNHIVQSVKYIKLTGSITCIQKSQNSKHLAIGSDQGHVSL 589
Query: 595 IDMDGPSLLYQKHIASEFSTGIISLQFITCSLNGFEKNILVVGTMDSSVQALHSETGNTL 654
+D++ ++LY KHIAS+ GIISLQF +C + GFEKN+LVV DSSV AL S+TGN +
Sbjct: 590 VDIEEANVLYTKHIASDICPGIISLQFESCIVQGFEKNVLVVAMRDSSVFALDSDTGNMI 649
Query: 655 CPESVHPTKPSKALFMQVLDRQRKTIIGSITKDGLSLREGNQIEDATTKQLYVLLCSEKA 714
+ P KP K L+MQ+LD ++ T + +G + +E+ + +Q VL+CSEKA
Sbjct: 650 GTNMIKPKKPFKVLYMQILDGKQDT-----SGNGFDTSRESTVEEISIRQPSVLVCSEKA 704
Query: 715 LYVYSFEHALQGIKKVLYKKKFHSSSCCWASTFY 748
+Y+YS H +QG+KKVL+KKKF SS C ASTFY
Sbjct: 705 IYIYSLAHVVQGVKKVLHKKKFSSSPICSASTFY 738
>AT5G05570.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:1656766-1663728 FORWARD
LENGTH=1099
Length = 1099
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 205/849 (24%), Positives = 361/849 (42%), Gaps = 142/849 (16%)
Query: 1 MFVKKLVEKASIKKIGGNSSDG---------LKGSDVDPRLIFHQGVPSDGDKVAYDNIQ 51
MFV+K ++K+S GG + L D+DP +I H G+PS +A+D IQ
Sbjct: 1 MFVRKFLQKSS----GGQNPPPPIAPPPRGCLMAEDLDPHIITHSGIPSTASLLAFDPIQ 56
Query: 52 KILAISTKDGRIKLFGKDNSQVLLISSELVPSKFLQFIQNQGILINVTSNNHIEVWDIDR 111
+LA+ T DGRIK+ G DN + +L S + +P K L+F+QNQG L+++++ N I+VWD+D
Sbjct: 57 CLLAVGTLDGRIKVIGGDNIEAILASPKQLPFKNLEFMQNQGFLVSISNENEIQVWDLDL 116
Query: 112 KLLCDVYIVKAKITCFEVIQHSLYMYFGDSNGNISVLKLHKKPWYVVQMKYIIP---LSA 168
+ ++ IT F ++ + YMY GD G +SVL ++Q+ Y +P LS
Sbjct: 117 RQPASSLKWESNITAFAILHGTGYMYVGDEYGMVSVLNYSADEGKLLQLPYYVPTDALSE 176
Query: 169 SYGNPTEVSDDTVVTHILPQPAAESQRVLIIFRNGQIILWD--------IRESKTIARTG 220
+ G + + D V +L QP ++ R+LI F NG + LWD +R +K + G
Sbjct: 177 AAGLSSPI--DYPVVGLLSQPCSKGTRLLIAFSNGLLFLWDASEDHVVLVRGNKDLPVEG 234
Query: 221 GNMSQPL---HNE-------SKRVSCACWVCPFGSKVVVGYSNGELFIWSIPSLNRTSGS 270
++ L H+E K +S CW GS + VGY +G++ W + S
Sbjct: 235 KTVADSLEASHDELSNLELDGKEISSLCWASTDGSVLAVGYVDGDILFWDFSDGQKGKPS 294
Query: 271 ASDLNSQKTPIFKLNLGYKSDRISIRSVKW---IYAEGKASRLY-----VMGASNLLQVV 322
+ KL L R+ + + W + + +L+ ++G+ +L ++
Sbjct: 295 --------NHVVKLQLSSAEKRLPVIVMHWCLDVSRKSSGGKLFIYGGDIIGSDEVLTML 346
Query: 323 LLNEHIESRTIKL----GLSLFECCIDMEIIXXXXXXXXXXXXXXXXXXXXGHIYLYDDN 378
L+ +K L+L DM + G + YDD
Sbjct: 347 GLDWSSGMGGLKCVGRADLTLSGSFADM--VLSPIASSRQSGVFLFLLTNPGQLQAYDDT 404
Query: 379 LIERYLLQSQSKSNPSLPKEVAVKLPLADSSITTAKFISNNPNMFNSKDEDYSQMV---K 435
+ + Q ++K + S P + +P D +T A F + N N + S++V K
Sbjct: 405 SLASLMSQKENKISVS-PLPYPMVVPTMDPHMTVATFSALNVN--DKTSLALSEIVLAAK 461
Query: 436 NYPPLIPIETNHKDWINMSSANFTGFSNVKHLYITGHSNGAITFWDASCPFFIPILQIKQ 495
P P + + + + ++ LY+ G+ +G++ WDA+ P + ++ I +
Sbjct: 462 ARTPRTPSGESAQWPLTGGVPSHVDDYKLERLYMAGYQDGSMRIWDATYP-CLSLIYILE 520
Query: 496 QSDSNFSLSGI--PLTELYFDINSPLLVSGDQSGMVRIIRFKPEPYAFNSFMSLTGGTKK 553
S ++G+ +T F + L G++ GMVR+ +K + + + T+K
Sbjct: 521 PKASVIDITGVDASVTAFCFCSKTSCLAVGNECGMVRL--YKLVGHTSGGTLEVVTNTEK 578
Query: 554 GADHV------------------ICSVKLVKTIGAVTCMNIDHISGHLAVGSDQGNVSVI 595
A H+ +C+++ V++ + LAVG G V+V+
Sbjct: 579 KAHHLHQEDGPQWLAAFSFLSSPVCTLQFVQS------------TRRLAVGFKCGKVAVL 626
Query: 596 DMDGPSLLYQKHIASEFSTGIISLQFITC--------------SLNGFEKNILVVGTMDS 641
D+ PS+L+ + S+ + I SL + S+N + +L T D
Sbjct: 627 DIGVPSVLFVTNSLSDSGSPIKSLYVKSSSAPTGSKSDPTDHNSINSEDDLLLCAMTKDG 686
Query: 642 SVQALHSETGNTLCPESVHPTKPSKALFMQVLD----------------------RQRKT 679
L TG L + P K A+ M +++ + K+
Sbjct: 687 QTILLDGNTGKILA-SCLRPLKNPTAICMHIIENCYENYETPSEKPAENPSGKDKHENKS 745
Query: 680 IIGSITKDGLSLREGNQI-EDATTKQLYV----LLCSEKALYVYSFEHALQGIKKVLYKK 734
I ++ E N + E Q++ L+CSE AL +Y+ + QG + + +
Sbjct: 746 HIIKASESHSPDGEQNAVTETKLIDQIFANSLFLMCSEDALRLYTVKSLSQGSLESIMEV 805
Query: 735 KFHSSSCCW 743
CCW
Sbjct: 806 NL-PRPCCW 813
>AT5G05570.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:1656766-1663728 FORWARD
LENGTH=1124
Length = 1124
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 208/873 (23%), Positives = 358/873 (41%), Gaps = 165/873 (18%)
Query: 1 MFVKKLVEKASIKKIGGNSSDG---------LKGSDVDPRLIFHQGVPSDGDKVAYDNIQ 51
MFV+K ++K+S GG + L D+DP +I H G+PS +A+D IQ
Sbjct: 1 MFVRKFLQKSS----GGQNPPPPIAPPPRGCLMAEDLDPHIITHSGIPSTASLLAFDPIQ 56
Query: 52 KILAISTKDGRIKLFGKDNSQVLLISSELVPSKFLQFIQNQGILINVTSNNHIEVWDIDR 111
+LA+ T DGRIK+ G DN + +L S + +P K L+F+QNQG L+++++ N I+VWD+D
Sbjct: 57 CLLAVGTLDGRIKVIGGDNIEAILASPKQLPFKNLEFMQNQGFLVSISNENEIQVWDLDL 116
Query: 112 KLLCDVYIVKAKITCFEVIQHSLYMYFGDSNGNISVLKLHKKPWYVVQMKYIIP---LSA 168
+ ++ IT F ++ + YMY GD G +SVL ++Q+ Y +P LS
Sbjct: 117 RQPASSLKWESNITAFAILHGTGYMYVGDEYGMVSVLNYSADEGKLLQLPYYVPTDALSE 176
Query: 169 SYGNPTEVSDDTVVTHILPQPAAESQRVLIIFRNGQIILWD--------IRESKTIARTG 220
+ G + + D V +L QP ++ R+LI F NG + LWD +R +K + G
Sbjct: 177 AAGLSSPI--DYPVVGLLSQPCSKGTRLLIAFSNGLLFLWDASEDHVVLVRGNKDLPVEG 234
Query: 221 GNMSQPL---HNE-------SKRVSCACWVCPFGSKVVVGYSNGELFIWSIPSLNRTSGS 270
++ L H+E K +S CW GS + VGY +G++ W + S
Sbjct: 235 KTVADSLEASHDELSNLELDGKEISSLCWASTDGSVLAVGYVDGDILFWDFSDGQKGKPS 294
Query: 271 ASDLNSQKTPIFKLNLGYKSDRISIRSVKW---IYAEGKASRLY-----VMGASNLLQVV 322
+ KL L R+ + + W + + +L+ ++G+ +L ++
Sbjct: 295 --------NHVVKLQLSSAEKRLPVIVMHWCLDVSRKSSGGKLFIYGGDIIGSDEVLTML 346
Query: 323 LLNEHIESRTIKL----GLSLFECCIDMEIIXXXXXXXXXXXXXXXXXXXXGHIYLYDDN 378
L+ +K L+L DM + G + YDD
Sbjct: 347 GLDWSSGMGGLKCVGRADLTLSGSFADM--VLSPIASSRQSGVFLFLLTNPGQLQAYDDT 404
Query: 379 LIERYLLQSQSKSNPSLPKEVAVKLPLADSSITTAKFISNNPNMFNSKDEDYSQMV---K 435
+ + Q ++K + S P + +P D +T A F + N N + S++V K
Sbjct: 405 SLASLMSQKENKISVS-PLPYPMVVPTMDPHMTVATFSALNVN--DKTSLALSEIVLAAK 461
Query: 436 NYPPLIPIETNHKDWINMSSANFTGFSNVKHLYITGHSNGAITFWDASCPFFIPILQIKQ 495
P P + + + + ++ LY+ G+ +G++ WDA+ P + ++ I +
Sbjct: 462 ARTPRTPSGESAQWPLTGGVPSHVDDYKLERLYMAGYQDGSMRIWDATYP-CLSLIYILE 520
Query: 496 QSDSNFSLSGI--PLTELYFDINSPLLVSGDQSGMVRIIRFKPEPYAFNSFMSLTGGTKK 553
S ++G+ +T F + L G++ GMVR+ + L G T
Sbjct: 521 PKASVIDITGVDASVTAFCFCSKTSCLAVGNECGMVRLYK-------------LVGHTSG 567
Query: 554 GADHVICSVK-----LVKTIGAVTCMNIDHISG--------------------------- 581
G V+ + + +V T+ C + H G
Sbjct: 568 GTLEVVTNTEKKGLAIVTTLTLWICYALSHAVGSLLVAHHLHQEDGPQWLAAFSFLSSPV 627
Query: 582 ----------HLAVGSDQGNVSVIDMDGPSLLYQKHIASEFSTGIISLQFITC------- 624
LAVG G V+V+D+ PS+L+ + S+ + I SL +
Sbjct: 628 CTLQFVQSTRRLAVGFKCGKVAVLDIGVPSVLFVTNSLSDSGSPIKSLYVKSSSAPTGSK 687
Query: 625 -------SLNGFEKNILVVGTMDSSVQALHSETGNTLCPESVHPTKPSKALFMQVLD--- 674
S+N + +L T D L TG L + P K A+ M +++
Sbjct: 688 SDPTDHNSINSEDDLLLCAMTKDGQTILLDGNTGKILA-SCLRPLKNPTAICMHIIENCY 746
Query: 675 -------------------RQRKTIIGSITKDGLSLREGNQI-EDATTKQLYV----LLC 710
+ K+ I ++ E N + E Q++ L+C
Sbjct: 747 ENYETPSEKPAENPSGKDKHENKSHIIKASESHSPDGEQNAVTETKLIDQIFANSLFLMC 806
Query: 711 SEKALYVYSFEHALQGIKKVLYKKKFHSSSCCW 743
SE AL +Y+ + QG + + + CCW
Sbjct: 807 SEDALRLYTVKSLSQGSLESIMEVNL-PRPCCW 838