Miyakogusa Predicted Gene

Lj2g3v1586470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1586470.1 Non Chatacterized Hit- tr|I3K7J5|I3K7J5_ORENI
Uncharacterized protein OS=Oreochromis niloticus GN=MO,36,2e-18,no
description,ATPase-like, ATP-binding domain; HATPase_c_3,NULL;
SUBFAMILY NOT NAMED,NULL; ZINC FIN,gene.g41931.t1.1
         (397 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV 1 |...    76   5e-14
AT4G24970.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...    75   5e-14
AT1G19100.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...    75   6e-14
AT5G50780.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...    75   9e-14
AT4G36280.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...    73   4e-13
AT5G13130.2 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...    65   7e-11
AT5G13130.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...    65   8e-11

>AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV 1 |
           chr4:17169669-17173187 REVERSE LENGTH=635
          Length = 635

 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 18/135 (13%)

Query: 187 RVDPSYLKTLGQAHSGWVFGGIAELVDNSRD-----AKATKIDISVDMIKLEKSGKDVPM 241
           RV P +L +   +H  W FG IAEL+DN+ D     A   KID  ++++K      + P 
Sbjct: 86  RVHPKFLHSNATSHK-WAFGAIAELLDNAVDEIQNGATVVKID-KINIVK-----DNTPA 138

Query: 242 LSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTA- 300
           L   D+G GMD + + K +S G+    K     IG++G GFKT  MRLG D +V +++  
Sbjct: 139 LVFQDNGGGMDPNGIRKCMSLGYSS--KKSNTTIGQYGNGFKTSTMRLGADAMVFSRSTR 196

Query: 301 ---NSRSIAFLSQSL 312
              +++SI  LS + 
Sbjct: 197 GGKSTQSIGLLSYTF 211


>AT4G24970.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein |
           chr4:12831125-12835449 FORWARD LENGTH=707
          Length = 707

 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 17/153 (11%)

Query: 186 IRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATKID-ISVDMIKLEKSGKDVPMLSV 244
           +RV P +L +   +H  W  G  AEL+DN+ D  A+    + VDM++  K G    ML +
Sbjct: 162 VRVHPKFLHSNATSHK-WALGAFAELLDNALDEVASGATYVKVDMLENNKGGNR--MLLI 218

Query: 245 IDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQ------ 298
            D+G GMD +++ + +S G+    K   + IG++G GFKT  MRLG DV+V ++      
Sbjct: 219 EDNGGGMDPEKMRQCMSLGYSAKSKL-ANTIGQYGNGFKTSTMRLGADVIVFSRCPGKDG 277

Query: 299 TANSRSIAFLSQSL--NEGKD---VP-LDYSLR 325
            ++++SI  LS +   + GK+   VP LDY  R
Sbjct: 278 KSSTQSIGLLSYTFLRSTGKEDIVVPMLDYERR 310


>AT1G19100.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein | chr1:6595560-6601159
           FORWARD LENGTH=663
          Length = 663

 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 77/155 (49%), Gaps = 16/155 (10%)

Query: 183 KNLIRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDA-KATKIDISVDMIKLEKSGKDVPM 241
           KN + V P +L +   +H  W FG +AEL+DN+ D  +     + VD     + G     
Sbjct: 109 KNYLHVHPMFLHSNATSHK-WAFGAVAELLDNAVDEIQNGATFVIVDKTTNPRDG--ATA 165

Query: 242 LSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLV------ 295
           L + DDG GMD   +   + FG    DK     IGR+G GFKT  MRLG DV+V      
Sbjct: 166 LLIQDDGGGMDPQAMRHCMGFGFS--DKKSDSAIGRYGNGFKTSTMRLGADVIVFSRHSK 223

Query: 296 ---LTQTANSRSIAFLSQSLNEGKDVP-LDYSLRA 326
              LTQ+    S  +L+++ ++   VP LDY   A
Sbjct: 224 NQTLTQSIGLLSYTYLTRTGHDRIVVPILDYEFNA 258


>AT5G50780.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein |
           chr5:20650269-20654948 FORWARD LENGTH=819
          Length = 819

 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 17/153 (11%)

Query: 186 IRVDPSYLKTLGQAHSGWVFGGIAELVDNSRD-AKATKIDISVDMIKLEKSGKDVPMLSV 244
           +RV P +L +   +H  W  G  AEL+DN+ D  ++    ++VDMI+  K G    M+ +
Sbjct: 153 VRVHPKFLHSNATSHK-WSLGAFAELLDNALDEVRSGATFVNVDMIQNRKDGS--KMILI 209

Query: 245 IDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQ------ 298
            D+G GM+ +++   +S G+    K   D IG++G GFKT  MRLG DV+V ++      
Sbjct: 210 EDNGGGMNPEKMRHCMSLGYSAKSKL-ADTIGQYGNGFKTSTMRLGADVIVFSRCLGKDG 268

Query: 299 TANSRSIAFLSQSL--NEGKD---VP-LDYSLR 325
            ++++SI  LS +   + GK+   VP LDY  R
Sbjct: 269 KSSTQSIGLLSYTFLKSTGKEDIVVPMLDYERR 301


>AT4G36280.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein |
           chr4:17165513-17169277 REVERSE LENGTH=626
          Length = 626

 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 10/131 (7%)

Query: 187 RVDPSYLKTLGQAHSGWVFGGIAELVDNSRDA-KATKIDISVDMIKLEKSGKDVPMLSVI 245
           RV P +L +   +H  W FG IAEL+DN+ D  +     + +D I + K   + P L   
Sbjct: 78  RVHPRFLHSNATSHK-WAFGAIAELLDNAVDEIQNGATFVKIDKINIVKD--NSPALVFQ 134

Query: 246 DDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQT----AN 301
           DDG GMD   + K +S G+    K     IG++G GFKT  MRLG D +V +++     +
Sbjct: 135 DDGGGMDPAGLRKCMSLGYSS--KKSNTTIGQYGNGFKTSTMRLGADAIVFSRSTRGGTS 192

Query: 302 SRSIAFLSQSL 312
           ++S+  LS + 
Sbjct: 193 TQSVGILSYTF 203


>AT5G13130.2 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein | chr5:4166755-4170324
           FORWARD LENGTH=696
          Length = 696

 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 10/134 (7%)

Query: 186 IRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATKID-ISVDMIKLEKSGKDVPMLSV 244
           +RV P +L     +H  W  G +AEL+DNS D  +     + VD    ++ GK   +L V
Sbjct: 100 VRVHPQFLHANATSHK-WALGALAELLDNSLDEVSNGATYVHVDSTINKRDGKS-SILIV 157

Query: 245 IDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTAN--- 301
            D+G GM+     + +S G+ +  ++  + +G++G GFKT  MRLG D +V +++     
Sbjct: 158 EDNGGGMNPSTFRECLSLGYSR-KRNMANRVGQYGNGFKTSTMRLGADAIVFSRSRGING 216

Query: 302 ---SRSIAFLSQSL 312
              ++SI  LS + 
Sbjct: 217 NNPTQSIGMLSYTF 230


>AT5G13130.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein | chr5:4166755-4170324
           FORWARD LENGTH=708
          Length = 708

 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 10/134 (7%)

Query: 186 IRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATKID-ISVDMIKLEKSGKDVPMLSV 244
           +RV P +L     +H  W  G +AEL+DNS D  +     + VD    ++ GK   +L V
Sbjct: 100 VRVHPQFLHANATSHK-WALGALAELLDNSLDEVSNGATYVHVDSTINKRDGKS-SILIV 157

Query: 245 IDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTAN--- 301
            D+G GM+     + +S G+ +  ++  + +G++G GFKT  MRLG D +V +++     
Sbjct: 158 EDNGGGMNPSTFRECLSLGYSR-KRNMANRVGQYGNGFKTSTMRLGADAIVFSRSRGING 216

Query: 302 ---SRSIAFLSQSL 312
              ++SI  LS + 
Sbjct: 217 NNPTQSIGMLSYTF 230