Miyakogusa Predicted Gene

Lj2g3v1575360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1575360.1 tr|I1LID5|I1LID5_SOYBN Thioredoxin reductase
OS=Glycine max GN=Gma.15493 PE=3 SV=1,80.56,0.00000006,
,NODE_34694_length_86_cov_337.976746.path2.1
         (36 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17420.1 | Symbols: NTRA, ATNTRA, NTR2 | NADPH-dependent thio...    53   6e-08
AT4G35460.1 | Symbols: ATNTRB, NTRB, NTR1 | NADPH-dependent thio...    52   1e-07

>AT2G17420.1 | Symbols: NTRA, ATNTRA, NTR2 | NADPH-dependent
           thioredoxin reductase A | chr2:7564357-7566219 FORWARD
           LENGTH=378
          Length = 378

 Score = 52.8 bits (125), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/36 (75%), Positives = 32/36 (88%), Gaps = 1/36 (2%)

Query: 1   MQSKALSNSKIKVIWNSAVVEAYGEGDSKRVLGGLK 36
           MQ +ALSN KI+VIWNSAVVEAYG+ ++ RVLGGLK
Sbjct: 245 MQQRALSNPKIEVIWNSAVVEAYGD-ENGRVLGGLK 279


>AT4G35460.1 | Symbols: ATNTRB, NTRB, NTR1 | NADPH-dependent
           thioredoxin reductase B | chr4:16842218-16843740 FORWARD
           LENGTH=375
          Length = 375

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/36 (72%), Positives = 31/36 (86%), Gaps = 1/36 (2%)

Query: 1   MQSKALSNSKIKVIWNSAVVEAYGEGDSKRVLGGLK 36
           MQ +ALSN KI VIWNS+VVEAYG+G+ + VLGGLK
Sbjct: 242 MQQRALSNPKIDVIWNSSVVEAYGDGE-RDVLGGLK 276