Miyakogusa Predicted Gene

Lj2g3v1575310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1575310.1 tr|Q6Z6H7|Q6Z6H7_ORYSJ Armadillo/beta-catenin
repeat protein-like OS=Oryza sativa subsp. japonica GN,65.15,5e-19,no
description,Armadillo-like helical; UNCHARACTERIZED,NULL,CUFF.37609.1
         (87 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33945.1 | Symbols:  | ARM repeat superfamily protein | chr4:...    94   2e-20

>AT4G33945.1 | Symbols:  | ARM repeat superfamily protein |
           chr4:16268119-16270514 FORWARD LENGTH=464
          Length = 464

 Score = 94.0 bits (232), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/67 (62%), Positives = 57/67 (85%)

Query: 18  LFVAQVMSIISVLSLRSPENAARAIEAGAGDLAIQAMEKFPAAHQMQRSSCLMIRNLVVR 77
           L + +VM IIS++ LRSP++AA+AIEAGAGDLA+QAM++FP A QMQR++C MIRN+ VR
Sbjct: 360 LVIQEVMLIISIICLRSPDHAAKAIEAGAGDLAVQAMKRFPVAAQMQRNACNMIRNIAVR 419

Query: 78  NPENRQV 84
           + ENR +
Sbjct: 420 SAENRTI 426