Miyakogusa Predicted Gene

Lj2g3v1575300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1575300.1 Non Chatacterized Hit- tr|D8SPD8|D8SPD8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,45.76,4e-19,UNCHARACTERIZED,NULL; no description,Armadillo-like
helical,CUFF.37608.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33945.1 | Symbols:  | ARM repeat superfamily protein | chr4:...   150   2e-37

>AT4G33945.1 | Symbols:  | ARM repeat superfamily protein |
           chr4:16268119-16270514 FORWARD LENGTH=464
          Length = 464

 Score =  150 bits (379), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 87/104 (83%)

Query: 18  LFVAQVMSIISVLSLRSPENAARAIEAGAGDLAIQAMEKFPAAHQMQRSSCLMIRNLVVR 77
           L + +VM IIS++ LRSP++AA+AIEAGAGDLA+QAM++FP A QMQR++C MIRN+ VR
Sbjct: 360 LVIQEVMLIISIICLRSPDHAAKAIEAGAGDLAVQAMKRFPVAAQMQRNACNMIRNIAVR 419

Query: 78  NPENRTILLKNGIEKYIRKAKQTHGNCKDAATDALRDLGLDNYN 121
           + ENRTILL NGIEK IR AK  +  C+ AATDALRDLGLDNYN
Sbjct: 420 SAENRTILLANGIEKLIRTAKANNETCRAAATDALRDLGLDNYN 463