Miyakogusa Predicted Gene

Lj2g3v1574250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1574250.1 tr|A9YVC3|A9YVC3_MEDTR 3-hydroxy-3-methylglutaryl
coenzyme A reductase OS=Medicago truncatula GN=MTR,79.13,0,seg,NULL;
HMG_CoA_R_NADP: hydroxymethylglutaryl-CoA
reductas,Hydroxymethylglutaryl-CoA reductase, eu,CUFF.37572.1
         (570 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76490.1 | Symbols: HMG1, HMGR1, AtHMGR1 | hydroxy methylglut...   752   0.0  
AT2G17370.1 | Symbols: HMG2, HMGR2 | 3-hydroxy-3-methylglutaryl-...   697   0.0  

>AT1G76490.1 | Symbols: HMG1, HMGR1, AtHMGR1 | hydroxy
           methylglutaryl CoA reductase 1 | chr1:28695801-28698206
           FORWARD LENGTH=642
          Length = 642

 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/542 (67%), Positives = 430/542 (79%), Gaps = 21/542 (3%)

Query: 33  LYVTNTVFFTLFFSVAYFLLHRWREKIRTSTPLHFVTVSEIAAILSLFASVIYLTSFFGI 92
           LY+TN VFFTLFFSVAY+LLHRWR+KIR +TPLH VT++E+ AI++L AS IYL     +
Sbjct: 105 LYLTNAVFFTLFFSVAYYLLHRWRDKIRYNTPLHVVTITELGAIIALIASFIYL-----L 159

Query: 93  GFILHPFAASRPVPGEDDDEEELVAD-------ISXXXXXXXXXXXKIANGNGKXXXXXX 145
           GF    F  S       D  +            ++           K+ N          
Sbjct: 160 GFFGIDFVQSFISRASGDAWDLADTIDDDDHRLVTCSPPTPIVSVAKLPNPE-------- 211

Query: 146 XXXXXXXXXXEDEEVIREVVSGSIPSYSLETKLGDCRRAAVIRHEAVERVVGRSLEGLPV 205
                     EDEE+++ V+ G IPSYSLE++LGDC+RAA IR EA++RV GRS+EGLP+
Sbjct: 212 -PIVTESLPEEDEEIVKSVIDGVIPSYSLESRLGDCKRAASIRREALQRVTGRSIEGLPL 270

Query: 206 EGFDYESILGQCCEMPIGFIQIPVGVAGPLLLDGKEYTVPMATTEGCLVASTNRGCKAIY 265
           +GFDYESILGQCCEMP+G+IQIPVG+AGPLLLDG EY+VPMATTEGCLVASTNRGCKA++
Sbjct: 271 DGFDYESILGQCCEMPVGYIQIPVGIAGPLLLDGYEYSVPMATTEGCLVASTNRGCKAMF 330

Query: 266 VSGGASAVLLRDGMTRAPVVRFSSAKRAAQLKFYLEDPENFDSLALTFNKSSRFAKLQSI 325
           +SGGA++ +L+DGMTRAPVVRF+SA+RA++LKF+LE+PENFD+LA+ FN+SSRFA+LQS+
Sbjct: 331 ISGGATSTVLKDGMTRAPVVRFASARRASELKFFLENPENFDTLAVVFNRSSRFARLQSV 390

Query: 326 KPAIVGKNLYIRFCCSTGDAMGMNMVSKGVQNVLAFLQEDFPDMDVIGISGNFCSDKKAA 385
           K  I GKN Y+RFCCSTGDAMGMNMVSKGVQNVL +L +DFPDMDVIGISGNFCSDKK A
Sbjct: 391 KCTIAGKNAYVRFCCSTGDAMGMNMVSKGVQNVLEYLTDDFPDMDVIGISGNFCSDKKPA 450

Query: 386 AVNWIEGRGKSXXXXXXXXXXXXXXXXXXXXXALVELNMLKNLTGSAVAGALGGFNAHAS 445
           AVNWIEGRGKS                     ALVELNMLKNL GSAVAG+LGGFNAHAS
Sbjct: 451 AVNWIEGRGKSVVCEAVIRGEIVNKVLKTSVAALVELNMLKNLAGSAVAGSLGGFNAHAS 510

Query: 446 NIVSAVYLATGQDPAQNVESSHCITMMEAVNDGRDLHVSVTMPSIEVGTVGGGTQLASQS 505
           NIVSAV++ATGQDPAQNVESS CITMMEA+NDG+D+H+SVTMPSIEVGTVGGGTQLASQS
Sbjct: 511 NIVSAVFIATGQDPAQNVESSQCITMMEAINDGKDIHISVTMPSIEVGTVGGGTQLASQS 570

Query: 506 ACLNLLGVKGASKELPGANSRQLATIIAGAVLAGELSLMSAIAAGQLVKSHMKYNRSSKD 565
           ACLNLLGVKGAS E PG N+R+LATI+AGAVLAGELSLMSAIAAGQLV+SHMKYNRSS+D
Sbjct: 571 ACLNLLGVKGASTESPGMNARRLATIVAGAVLAGELSLMSAIAAGQLVRSHMKYNRSSRD 630

Query: 566 IT 567
           I+
Sbjct: 631 IS 632


>AT2G17370.1 | Symbols: HMG2, HMGR2 | 3-hydroxy-3-methylglutaryl-CoA
           reductase 2 | chr2:7550007-7551981 FORWARD LENGTH=562
          Length = 562

 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/534 (65%), Positives = 408/534 (76%), Gaps = 16/534 (2%)

Query: 33  LYVTNTVFFTLFFSVAYFLLHRWREKIRTSTPLHFVTVSEIAAILSLFASVIYLTSFFGI 92
           LY+TNT F +LFF+  YFLL RWREKIR STPLH V +SEI A++   AS IYL  F GI
Sbjct: 37  LYLTNTFFLSLFFATVYFLLSRWREKIRNSTPLHVVDLSEICALIGFVASFIYLLGFCGI 96

Query: 93  GFILHPFAASRPVPGEDDDEEELVADISXXXXXXXXXXXKIANGNGKXXXXXXXXXXXXX 152
             I   F +S      DDD       I             I   +               
Sbjct: 97  DLI---FRSS-----SDDDVWVNDGMIPCNQSLDCREVLPIKPNS------VDPPRESEL 142

Query: 153 XXXEDEEVIREVVSGSIPSYSLETKLGDCRRAAVIRHEAVERVVGRSLEGLPVEGFDYES 212
              EDEE+++ V+ G+IPSYSLETKLGDC+RAA IR EAV+R+ G+SL GLP+EGFDY S
Sbjct: 143 DSVEDEEIVKLVIDGTIPSYSLETKLGDCKRAAAIRREAVQRITGKSLTGLPLEGFDYNS 202

Query: 213 ILGQCCEMPIGFIQIPVGVAGPLLLDGKEYTVPMATTEGCLVASTNRGCKAIYVSGGASA 272
           ILGQCCEMP+G++QIPVG+AGPLLLDG EY+VPMATTEGCLVASTNRG KAI++SGGA +
Sbjct: 203 ILGQCCEMPVGYVQIPVGIAGPLLLDGVEYSVPMATTEGCLVASTNRGFKAIHLSGGAFS 262

Query: 273 VLLRDGMTRAPVVRFSSAKRAAQLKFYLEDPENFDSLALTFNKSSRFAKLQSIKPAIVGK 332
           VL++D MTRAPVVRF SA+RAA + FYL+DP NF+ L+L FNKSSRFA+LQSI   I G+
Sbjct: 263 VLVKDAMTRAPVVRFPSARRAALVMFYLQDPSNFERLSLIFNKSSRFARLQSITCTIAGR 322

Query: 333 NLYIRFCCSTGDAMGMNMVSKGVQNVLAFLQEDFPDMDVIGISGNFCSDKKAAAVNWIEG 392
           NLY RF CSTGDAMGMNMVSKGVQNVL F++ +FPDMDVIGISGN+CSDKKA+AVNWIEG
Sbjct: 323 NLYPRFACSTGDAMGMNMVSKGVQNVLDFVKSEFPDMDVIGISGNYCSDKKASAVNWIEG 382

Query: 393 RGKSXXXXXXXXXXXXXXXXXXXXXALVELNMLKNLTGSAVAGALGGFNAHASNIVSAVY 452
           RGK                      ALVELN LKNL GSA+AG+LGGFNAH+SNIVSAV+
Sbjct: 383 RGKHVVCEAFIKAEIVEKVLKTSVEALVELNTLKNLVGSAMAGSLGGFNAHSSNIVSAVF 442

Query: 453 LATGQDPAQNVESSHCITMMEAVNDGRDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLG 512
           +ATGQDPAQNVESSHC+TM+  + DG DLH+SV+MP IEVGTVGGGTQLASQ+ACLNLLG
Sbjct: 443 IATGQDPAQNVESSHCMTMI--LPDGDDLHISVSMPCIEVGTVGGGTQLASQAACLNLLG 500

Query: 513 VKGASKELPGANSRQLATIIAGAVLAGELSLMSAIAAGQLVKSHMKYNRSSKDI 566
           VKG++ E PG+N++QLA I+AG+VLAGELSLMSAIAAGQLVKSHMKYNRSS+DI
Sbjct: 501 VKGSNNEKPGSNAQQLARIVAGSVLAGELSLMSAIAAGQLVKSHMKYNRSSRDI 554