Miyakogusa Predicted Gene

Lj2g3v1574130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1574130.1 Non Chatacterized Hit- tr|K4DH47|K4DH47_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,55.06,5e-17,HSP20,Alpha crystallin/Hsp20 domain;
ARID,ARID/BRIGHT DNA-binding domain; ARID/BRIGHT DNA binding
do,CUFF.37532.1
         (781 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17410.2 | Symbols:  | ARID/BRIGHT DNA-binding domain-contain...   470   e-132
AT2G17410.1 | Symbols:  | ARID/BRIGHT DNA-binding domain-contain...   470   e-132
AT1G76510.2 | Symbols:  | ARID/BRIGHT DNA-binding domain-contain...   363   e-100
AT1G76510.1 | Symbols:  | ARID/BRIGHT DNA-binding domain-contain...   363   e-100
AT1G76510.3 | Symbols:  | ARID/BRIGHT DNA-binding domain-contain...   349   3e-96
AT1G20910.1 | Symbols:  | ARID/BRIGHT DNA-binding domain-contain...   334   2e-91
AT1G76110.1 | Symbols:  | HMG (high mobility group) box protein ...    61   4e-09
AT1G04880.1 | Symbols:  | HMG (high mobility group) box protein ...    55   3e-07

>AT2G17410.2 | Symbols:  | ARID/BRIGHT DNA-binding domain-containing
           protein | chr2:7559869-7563474 FORWARD LENGTH=780
          Length = 780

 Score =  470 bits (1210), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 225/338 (66%), Positives = 260/338 (76%), Gaps = 13/338 (3%)

Query: 446 HAAPADTKSEFKNVLEVEKADEKQA-TEPSDNGNSNSKNMFFLDPDHFYDGNESGTEEDQ 504
           + A ++ KSE +   ++     K   T P  +G   +K  F LD     DGNESGTEEDQ
Sbjct: 440 YVASSNIKSEARGSGDLNNGVHKIVRTPPVFDGTMRAKRSFLLD--DASDGNESGTEEDQ 497

Query: 505 SAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKLWRQVGESFK 564
           SAFMKEL++FFRER+M+FKPPKFYGEGLNCLKLWR+VTRLGGYDKVT  KLWRQVGESF+
Sbjct: 498 SAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGESFR 557

Query: 565 PPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASQPEPMNIENQASVSGXXXXXX 624
           PPKTCTTVSWTFRGFYEKALL+YERH +  GEL +P+  + EPMNI+NQAS SG      
Sbjct: 558 PPKTCTTVSWTFRGFYEKALLEYERHKVSEGELQIPLPLELEPMNIDNQASGSGRARRDA 617

Query: 625 XXXXMQGWHSQRLLGNGEVSDPIIKDRNSVPVQKREKQLKSI-NLLKRKKPSYMDNAVKA 683
               MQGWHSQRL GNGEVSDP IKD+N V  QKREKQ+ +   LLKRK         +A
Sbjct: 618 ASRAMQGWHSQRLNGNGEVSDPAIKDKNLVLHQKREKQIGTTPGLLKRK---------RA 668

Query: 684 ARSKPSKPQLDTVVIDIGPPAEWVKVNVQKTKDCFEIYALVPGLLREEVRVQSDPAGRLV 743
           A      P+LD  V+D+GPPA+WVK+NVQ+T+DCFE+YALVPGL+REEVRVQSDPAGRLV
Sbjct: 669 AEHVVVFPRLDVTVVDVGPPADWVKINVQRTQDCFEVYALVPGLVREEVRVQSDPAGRLV 728

Query: 744 ISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTL 781
           ISGEPE+P NPWG TPFKKVVSLP+RIDPH TSAVVTL
Sbjct: 729 ISGEPENPMNPWGATPFKKVVSLPTRIDPHHTSAVVTL 766


>AT2G17410.1 | Symbols:  | ARID/BRIGHT DNA-binding domain-containing
           protein | chr2:7559869-7563474 FORWARD LENGTH=786
          Length = 786

 Score =  470 bits (1209), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 226/340 (66%), Positives = 262/340 (77%), Gaps = 11/340 (3%)

Query: 446 HAAPADTKSEFKNVLEVEKADEKQA-TEPSDNGNSNSKNMFFLDPDHFYDGNESGTEEDQ 504
           + A ++ KSE +   ++     K   T P  +G   +K  F LD     DGNESGTEEDQ
Sbjct: 440 YVASSNIKSEARGSGDLNNGVHKIVRTPPVFDGTMRAKRSFLLD--DASDGNESGTEEDQ 497

Query: 505 SAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKLWRQVGESFK 564
           SAFMKEL++FFRER+M+FKPPKFYGEGLNCLKLWR+VTRLGGYDKVT  KLWRQVGESF+
Sbjct: 498 SAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGESFR 557

Query: 565 PPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASQPEPMNIENQASVSGXXXXXX 624
           PPKTCTTVSWTFRGFYEKALL+YERH +  GEL +P+  + EPMNI+NQAS SG      
Sbjct: 558 PPKTCTTVSWTFRGFYEKALLEYERHKVSEGELQIPLPLELEPMNIDNQASGSGRARRDA 617

Query: 625 XXXXMQGWHSQRLLGNGEVSDPIIKDRNSVPVQKREKQLKSI-NLLKRKKPSY--MDNAV 681
               MQGWHSQRL GNGEVSDP IKD+N V  QKREKQ+ +   LLKRK+ +     NA+
Sbjct: 618 ASRAMQGWHSQRLNGNGEVSDPAIKDKNLVLHQKREKQIGTTPGLLKRKRAAEHGAKNAI 677

Query: 682 KAARSKPSKPQLDTVVIDIGPPAEWVKVNVQKTKDCFEIYALVPGLLREEVRVQSDPAGR 741
                  SK  LD  V+D+GPPA+WVK+NVQ+T+DCFE+YALVPGL+REEVRVQSDPAGR
Sbjct: 678 HV-----SKSMLDVTVVDVGPPADWVKINVQRTQDCFEVYALVPGLVREEVRVQSDPAGR 732

Query: 742 LVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTL 781
           LVISGEPE+P NPWG TPFKKVVSLP+RIDPH TSAVVTL
Sbjct: 733 LVISGEPENPMNPWGATPFKKVVSLPTRIDPHHTSAVVTL 772


>AT1G76510.2 | Symbols:  | ARID/BRIGHT DNA-binding domain-containing
           protein | chr1:28708927-28712498 REVERSE LENGTH=434
          Length = 434

 Score =  363 bits (933), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/293 (60%), Positives = 222/293 (75%), Gaps = 14/293 (4%)

Query: 496 NESGTEEDQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKL 555
           +E+G  +DQ AF+KE+E F +E  +EFK PKFYG+ LNCLKLWR+V +LGGYD VT+ KL
Sbjct: 137 DEAGAPQDQEAFIKEVEAFNKENFLEFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSKL 196

Query: 556 WRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASQPEPMNIE---- 611
           WRQVGESF PPKTCTTVSWTFR FYEKALL+YE+H  + GELN+P ++      IE    
Sbjct: 197 WRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHLRQNGELNLPGSASLPSSGIEKEAS 256

Query: 612 -NQASVSGXXXXXXXXXXMQGWHSQRLLGNGEVSDPIIKDR--NSVPVQKREKQLKSINL 668
            +QAS SG          MQGWHSQRLLG+GEV++PI+K++  NS P   ++K LK+I +
Sbjct: 257 SHQASGSGRTRRDAAARAMQGWHSQRLLGSGEVTEPIVKEKGLNSTP---KQKNLKNIGV 313

Query: 669 LKRKKPSYMDNAVKAARSKPSKPQLDTVVIDIGPPAEWVKVNVQKTKDCFEIYALVPGLL 728
            K+K  + MD       S  S+ Q    VID+GPPA+WVK+NV++TKDCFEI+ALVPGLL
Sbjct: 314 QKQKTTTGMDLVF----SHESEKQSTAEVIDVGPPADWVKINVRETKDCFEIFALVPGLL 369

Query: 729 REEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTL 781
           REEVRVQSDPAGRLVI+G+PE  +NPWG+TPFKKVV+ P+RIDP  TSAVV+L
Sbjct: 370 REEVRVQSDPAGRLVIAGQPEQLDNPWGITPFKKVVNFPARIDPLHTSAVVSL 422


>AT1G76510.1 | Symbols:  | ARID/BRIGHT DNA-binding domain-containing
           protein | chr1:28708927-28712498 REVERSE LENGTH=434
          Length = 434

 Score =  363 bits (933), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/293 (60%), Positives = 222/293 (75%), Gaps = 14/293 (4%)

Query: 496 NESGTEEDQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKL 555
           +E+G  +DQ AF+KE+E F +E  +EFK PKFYG+ LNCLKLWR+V +LGGYD VT+ KL
Sbjct: 137 DEAGAPQDQEAFIKEVEAFNKENFLEFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSKL 196

Query: 556 WRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHNIKGGELNVPIASQPEPMNIE---- 611
           WRQVGESF PPKTCTTVSWTFR FYEKALL+YE+H  + GELN+P ++      IE    
Sbjct: 197 WRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHLRQNGELNLPGSASLPSSGIEKEAS 256

Query: 612 -NQASVSGXXXXXXXXXXMQGWHSQRLLGNGEVSDPIIKDR--NSVPVQKREKQLKSINL 668
            +QAS SG          MQGWHSQRLLG+GEV++PI+K++  NS P   ++K LK+I +
Sbjct: 257 SHQASGSGRTRRDAAARAMQGWHSQRLLGSGEVTEPIVKEKGLNSTP---KQKNLKNIGV 313

Query: 669 LKRKKPSYMDNAVKAARSKPSKPQLDTVVIDIGPPAEWVKVNVQKTKDCFEIYALVPGLL 728
            K+K  + MD       S  S+ Q    VID+GPPA+WVK+NV++TKDCFEI+ALVPGLL
Sbjct: 314 QKQKTTTGMDLVF----SHESEKQSTAEVIDVGPPADWVKINVRETKDCFEIFALVPGLL 369

Query: 729 REEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTL 781
           REEVRVQSDPAGRLVI+G+PE  +NPWG+TPFKKVV+ P+RIDP  TSAVV+L
Sbjct: 370 REEVRVQSDPAGRLVIAGQPEQLDNPWGITPFKKVVNFPARIDPLHTSAVVSL 422


>AT1G76510.3 | Symbols:  | ARID/BRIGHT DNA-binding domain-containing
           protein | chr1:28708681-28712498 REVERSE LENGTH=493
          Length = 493

 Score =  349 bits (896), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 178/316 (56%), Positives = 222/316 (70%), Gaps = 37/316 (11%)

Query: 496 NESGTEEDQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKL 555
           +E+G  +DQ AF+KE+E F +E  +EFK PKFYG+ LNCLKLWR+V +LGGYD VT+ KL
Sbjct: 137 DEAGAPQDQEAFIKEVEAFNKENFLEFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSKL 196

Query: 556 WRQVGESFKPPKTCTTVSWTFRGFYEK-----------------------ALLDYERHNI 592
           WRQVGESF PPKTCTTVSWTFR FYEK                       ALL+YE+H  
Sbjct: 197 WRQVGESFHPPKTCTTVSWTFRIFYEKVNFIFGLSTEYALILMRLYLFSLALLEYEKHLR 256

Query: 593 KGGELNVPIASQPEPMNIE-----NQASVSGXXXXXXXXXXMQGWHSQRLLGNGEVSDPI 647
           + GELN+P ++      IE     +QAS SG          MQGWHSQRLLG+GEV++PI
Sbjct: 257 QNGELNLPGSASLPSSGIEKEASSHQASGSGRTRRDAAARAMQGWHSQRLLGSGEVTEPI 316

Query: 648 IKDR--NSVPVQKREKQLKSINLLKRKKPSYMDNAVKAARSKPSKPQLDTVVIDIGPPAE 705
           +K++  NS P   ++K LK+I + K+K  + MD       S  S+ Q    VID+GPPA+
Sbjct: 317 VKEKGLNSTP---KQKNLKNIGVQKQKTTTGMD----LVFSHESEKQSTAEVIDVGPPAD 369

Query: 706 WVKVNVQKTKDCFEIYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVS 765
           WVK+NV++TKDCFEI+ALVPGLLREEVRVQSDPAGRLVI+G+PE  +NPWG+TPFKKVV+
Sbjct: 370 WVKINVRETKDCFEIFALVPGLLREEVRVQSDPAGRLVIAGQPEQLDNPWGITPFKKVVN 429

Query: 766 LPSRIDPHQTSAVVTL 781
            P+RIDP  TSAVV+L
Sbjct: 430 FPARIDPLHTSAVVSL 445


>AT1G20910.1 | Symbols:  | ARID/BRIGHT DNA-binding domain-containing
           protein | chr1:7277209-7280635 REVERSE LENGTH=398
          Length = 398

 Score =  334 bits (856), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 168/325 (51%), Positives = 224/325 (68%), Gaps = 12/325 (3%)

Query: 463 EKADEKQATEPSDNG-NSNSKNMFFLDPDHFYDGNESGTEEDQSAFMKELENFFRERSME 521
            K    Q   P   G N+  +  + LD +     +E+GT  +Q AF++E+E F++E  +E
Sbjct: 68  RKTRRVQMLSPKTEGENAKKRKTWLLDSEA-QGTDEAGTPVEQVAFLREVEAFYKESFLE 126

Query: 522 FKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYE 581
           FKPPKFYG+ LN LKLWR+V  LGGY+ VT+ KLWRQVGESF PPKTCTTVS+TFR FYE
Sbjct: 127 FKPPKFYGQPLNILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPPKTCTTVSYTFRNFYE 186

Query: 582 KALLDYERHNIKGGELNVP-----IASQPEPMNIENQASVSGXXXXXXXXXXMQGWHSQR 636
           KALL+YE+     GELN+P     ++S  E     +Q S SG          MQGWH+QR
Sbjct: 187 KALLEYEKCLRNNGELNLPGSTLILSSSVEKEPSSHQGSGSGRARRDSAARAMQGWHAQR 246

Query: 637 LLGNGEVSDPIIKDRNSVPVQKREKQLKSINLLKRKKPSYMDNAVKAARSKPSKPQLDTV 696
           L+G+GEV+ P +KD+  +   K  K+LKSI L K K+ + MD+ V     K    QL   
Sbjct: 247 LVGSGEVTAPAVKDKGLISTPK-HKKLKSIGLQKHKQQTSMDHVVTNEADK----QLAAE 301

Query: 697 VIDIGPPAEWVKVNVQKTKDCFEIYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWG 756
           V+D+GP A+WVK+NV+++KD FEI+ALVPGLLR+EVR+QSDPAG++VI+G+PE  +NPWG
Sbjct: 302 VVDVGPVADWVKINVKESKDSFEIFALVPGLLRKEVRIQSDPAGKVVITGQPEQLDNPWG 361

Query: 757 VTPFKKVVSLPSRIDPHQTSAVVTL 781
           +TPFKK+V L +RIDP  TSAV+++
Sbjct: 362 ITPFKKIVDLSARIDPLHTSAVMSM 386


>AT1G76110.1 | Symbols:  | HMG (high mobility group) box protein
           with ARID/BRIGHT DNA-binding domain |
           chr1:28555287-28557465 REVERSE LENGTH=338
          Length = 338

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 2/104 (1%)

Query: 502 EDQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKLWRQVGE 561
           +D S F   L  F    S +F  P   G+ L+   L+  VTR GGY+KV   K WR+VG 
Sbjct: 39  KDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEKVVVEKKWREVGG 98

Query: 562 SFKPPKTCTTVSWTFRGFYEKALLDYERHNI--KGGELNVPIAS 603
            F+   T T+ S+  R  Y   L  YE+ ++    G L  PIA+
Sbjct: 99  VFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIAT 142


>AT1G04880.1 | Symbols:  | HMG (high mobility group) box protein
           with ARID/BRIGHT DNA-binding domain |
           chr1:1376106-1378264 REVERSE LENGTH=448
          Length = 448

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 42/87 (48%)

Query: 503 DQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRSVTRLGGYDKVTSCKLWRQVGES 562
           D   FM  LE        +F  P   G  L+  KL+  VT  GG +K+ + + W++V  +
Sbjct: 31  DPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTAT 90

Query: 563 FKPPKTCTTVSWTFRGFYEKALLDYER 589
           F  P T T  S+  R +Y   L +YE+
Sbjct: 91  FVFPPTATNASYVLRKYYFSLLNNYEQ 117