Miyakogusa Predicted Gene

Lj2g3v1571990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1571990.1 Non Chatacterized Hit- tr|G7JY02|G7JY02_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,27.08,2e-16,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,Protein of unknown function DUF647; DUF647,Protein of
unk,CUFF.37500.1
         (328 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G45890.1 | Symbols: RUS1 | Protein of unknown function, DUF64...   404   e-113
AT1G13770.2 | Symbols: RUS3 | Protein of unknown function, DUF64...    76   3e-14
AT1G13770.1 | Symbols: RUS3 | Protein of unknown function, DUF64...    75   4e-14
AT2G31190.1 | Symbols: RUS2, WXR1 | Protein of unknown function,...    70   1e-12
AT2G31190.2 | Symbols: RUS2 | Protein of unknown function, DUF64...    70   2e-12
AT5G49820.1 | Symbols: EMB1879, RUS6 | Protein of unknown functi...    69   4e-12
AT5G01510.1 | Symbols: RUS5 | Protein of unknown function, DUF64...    66   3e-11

>AT3G45890.1 | Symbols: RUS1 | Protein of unknown function, DUF647 |
           chr3:16871697-16874100 FORWARD LENGTH=608
          Length = 608

 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 191/272 (70%), Positives = 226/272 (83%)

Query: 49  LIQASTRSCFFAGFAAQRNFAEVIAKGEVQGMASRFIGIALGIGLGNCIGSSTPLVLASF 108
           LIQA+TRSCF AGFA+QRNFAEVIAKGE QGM S+ +GI LGI + NCIG+ST L LA+F
Sbjct: 324 LIQAATRSCFNAGFASQRNFAEVIAKGEAQGMVSKSVGILLGIVVANCIGTSTSLALAAF 383

Query: 109 SVITWIHMYCNLKSYQSIQLRTLNPYRASLVFSEYLLSGQAPPVKEVNNEEPLFPAVPIL 168
            V+T IHMY NLKSYQ IQLRTLNPYRASLVFSEYL+SGQAP +KEVN+EEPLFP V   
Sbjct: 384 GVVTTIHMYTNLKSYQCIQLRTLNPYRASLVFSEYLISGQAPLIKEVNDEEPLFPTVRFS 443

Query: 169 NATFASKVQSNFVSSEAKDAAGEIEQRLQLGSKLSEIINSKEDVLALFALYKNEGYILSE 228
           N     K+Q   +SSEAK AA +IE+RLQLGSKLS++I++KE+ +ALF LY+NEGYIL+E
Sbjct: 444 NMKSPEKLQDFVLSSEAKAAAADIEERLQLGSKLSDVIHNKEEAIALFDLYRNEGYILTE 503

Query: 229 HMGKFCVVLKENCSQLDMLKALFQVNYLYWLEKNAGIGGRGTLNDSKPGGRLHISLEYAE 288
           H G+FCV+LKE+ +  DML++LFQVNYLYWLEKNAGI    T +D KPGGRLHISL+Y  
Sbjct: 504 HKGRFCVMLKESSTPQDMLRSLFQVNYLYWLEKNAGIEPASTYSDCKPGGRLHISLDYVR 563

Query: 289 REFKHVRNDGESVGWIMDGLIARPLPTRIRLG 320
           REF+H + D ESVGW+ +GLIARPLPTRIRLG
Sbjct: 564 REFEHAKEDSESVGWVTEGLIARPLPTRIRLG 595


>AT1G13770.2 | Symbols: RUS3 | Protein of unknown function, DUF647 |
           chr1:4722243-4724345 FORWARD LENGTH=353
          Length = 353

 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 22/212 (10%)

Query: 43  SRSAASLIQASTRSCFFAGFAAQRNFAEVIAKGEVQGMASRFIGIALGIGLGNCIGSSTP 102
           SRS   +   +TR+     FA Q N A++ AK   Q   +  +G++LG+ L      +  
Sbjct: 92  SRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLARFTSGNPM 151

Query: 103 LVLASFSVITWIHMYCNLKSYQSIQLRTLNPYRASLVFSEYLLSGQAPPVKEVNNEEPLF 162
            +  SF  +T  HMY N ++ + + L +LN  R+S++ + ++ +GQ    ++V++ E + 
Sbjct: 152 AIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHFIQTGQVLSPEQVSSMEGVL 211

Query: 163 PAVPILNATFASKVQSNFVSSEAKDAAGEIEQRLQLGSKLSEIINSKEDVLALF-----A 217
           P        +A+ ++S          +  + +R+QLG ++S +   + D+L L      +
Sbjct: 212 P-------LWATSLRST--------NSKPLHKRVQLGVRVSSL--PRLDMLQLLNGVGAS 254

Query: 218 LYKNEGYILSEHMGKFCVVLKENCSQLDMLKA 249
            YKN  Y+L+   G   V+L ++    D+LK+
Sbjct: 255 SYKNAKYLLAHIKGNVSVILHKDSKPADVLKS 286


>AT1G13770.1 | Symbols: RUS3 | Protein of unknown function, DUF647 |
           chr1:4721717-4724345 FORWARD LENGTH=440
          Length = 440

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 22/212 (10%)

Query: 43  SRSAASLIQASTRSCFFAGFAAQRNFAEVIAKGEVQGMASRFIGIALGIGLGNCIGSSTP 102
           SRS   +   +TR+     FA Q N A++ AK   Q   +  +G++LG+ L      +  
Sbjct: 179 SRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLARFTSGNPM 238

Query: 103 LVLASFSVITWIHMYCNLKSYQSIQLRTLNPYRASLVFSEYLLSGQAPPVKEVNNEEPLF 162
            +  SF  +T  HMY N ++ + + L +LN  R+S++ + ++ +GQ    ++V++ E + 
Sbjct: 239 AIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHFIQTGQVLSPEQVSSMEGVL 298

Query: 163 PAVPILNATFASKVQSNFVSSEAKDAAGEIEQRLQLGSKLSEIINSKEDVLALF-----A 217
           P        +A+ ++S          +  + +R+QLG ++S +   + D+L L      +
Sbjct: 299 P-------LWATSLRST--------NSKPLHKRVQLGVRVSSL--PRLDMLQLLNGVGAS 341

Query: 218 LYKNEGYILSEHMGKFCVVLKENCSQLDMLKA 249
            YKN  Y+L+   G   V+L ++    D+LK+
Sbjct: 342 SYKNAKYLLAHIKGNVSVILHKDSKPADVLKS 373


>AT2G31190.1 | Symbols: RUS2, WXR1 | Protein of unknown function,
           DUF647 | chr2:13291458-13293681 REVERSE LENGTH=433
          Length = 433

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 3/145 (2%)

Query: 27  CLLIFLKMLLFAVAGASRSAASLIQASTRSCFFAGFAAQRNFAEVIAKGEVQGMASRFIG 86
           C  +FL+M    +   ++  A++   +TR   ++ FA + N +++ AKGE         G
Sbjct: 176 CPHLFLEMA--GLGNFAKGMATVAARATRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAG 233

Query: 87  IALGIGLGNCIGSSTPLVLASFSVITWIHMYCNLKSYQSIQLRTLNPYRASLVFSEYLLS 146
           I  GI L + I SS    L   S+++ +H+Y  ++  + + + TLNP R +L+ + +L +
Sbjct: 234 IGAGIQLASTICSSMEGKLVVGSILSVVHVYSVVEQMRGVPINTLNPQRTALIVANFLKT 293

Query: 147 GQAPPVKEVNNEEPL-FPAVPILNA 170
           G+ P   ++  +E L FP  PI +A
Sbjct: 294 GKVPSPPDLRFQEDLMFPERPIQDA 318


>AT2G31190.2 | Symbols: RUS2 | Protein of unknown function, DUF647 |
           chr2:13291458-13293681 REVERSE LENGTH=432
          Length = 432

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 3/145 (2%)

Query: 27  CLLIFLKMLLFAVAGASRSAASLIQASTRSCFFAGFAAQRNFAEVIAKGEVQGMASRFIG 86
           C  +FL+M    +   ++  A++   +TR   ++ FA + N +++ AKGE         G
Sbjct: 175 CPHLFLEMA--GLGNFAKGMATVAARATRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAG 232

Query: 87  IALGIGLGNCIGSSTPLVLASFSVITWIHMYCNLKSYQSIQLRTLNPYRASLVFSEYLLS 146
           I  GI L + I SS    L   S+++ +H+Y  ++  + + + TLNP R +L+ + +L +
Sbjct: 233 IGAGIQLASTICSSMEGKLVVGSILSVVHVYSVVEQMRGVPINTLNPQRTALIVANFLKT 292

Query: 147 GQAPPVKEVNNEEPL-FPAVPILNA 170
           G+ P   ++  +E L FP  PI +A
Sbjct: 293 GKVPSPPDLRFQEDLMFPERPIQDA 317


>AT5G49820.1 | Symbols: EMB1879, RUS6 | Protein of unknown function,
           DUF647 | chr5:20246753-20249432 REVERSE LENGTH=497
          Length = 497

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/297 (20%), Positives = 118/297 (39%), Gaps = 39/297 (13%)

Query: 32  LKMLLFAVAGASRSAASLIQASTRSCFFAGFAAQRNFAEVIAKGEVQGMASRFIGIALGI 91
           L + L   A   ++ A++   STR+  +  FA   N  +V AKGE  G     I   +G 
Sbjct: 222 LFLPLACAANVVKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGN----IADLMGT 277

Query: 92  GLGNCIGSSTPLVLASFSVITWIHMYCNLKSYQSIQLRTLNPYRASLVFSEYLLSGQAPP 151
           G    I    P ++ +F +++  ++  + +  +S+ L TLN  R ++    +L +G+ P 
Sbjct: 278 GFSILISKRNPSLVTTFGLLSCGYLMSSYQEVRSVVLHTLNRARFTVAVESFLKTGRVPS 337

Query: 152 VKEVNNEEPLFPAVPILNATFASKVQSNFVSSEAKDAAGEIEQRLQLGSKLSEIINSKED 211
           ++E N +E +F   P ++                       ++ + LG++  +       
Sbjct: 338 LQEGNIQEKIF-TFPWVD-----------------------DRPVMLGARFKDAFQDPST 373

Query: 212 VLALFALYKNEGYIL--SEHMGKFCVVLKENCSQLDMLKALFQVNYLYWLEKNAGIGGRG 269
            +A+   +  E Y++  S   GK   +LK   +  D+LKA F  + L      +  G   
Sbjct: 374 YMAVKPFFDKERYMVTYSPTKGKVYALLKHQANSDDILKAAFHAHVLLHFMNQSKDGNPR 433

Query: 270 TLNDSKPG---------GRLHISLEYAEREFKHVRNDGESVGWIMDGLIARPLPTRI 317
           ++    P           R+  S E     +   ++     GW M   +  P   R+
Sbjct: 434 SVEQLDPAFAPTEYELESRIAESCEMVSTSYGVFKSRAAEQGWRMSESLLNPGRARL 490


>AT5G01510.1 | Symbols: RUS5 | Protein of unknown function, DUF647 |
           chr5:201702-205151 FORWARD LENGTH=509
          Length = 509

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 36/238 (15%)

Query: 34  MLLFAVAGASRSAASLIQASTRSCFFAGFAAQRNFAEVIAKGEVQGMASRFIGIALGIGL 93
           +LL +    +++ A  ++  +       FA   N  EV AK EV  +A++ IG+  GI +
Sbjct: 239 LLLASTGNLAKAVARGLRDPSFRVIQNHFAISGNLGEVAAKEEVWEVAAQLIGLGFGILI 298

Query: 94  GNCIG--SSTPLVLASFSVITWIHMYCNLKSYQSIQLRTLNPYRASLVFSEYLLSGQAPP 151
            +  G   S P VL +++ I  +H++   +S   +Q  T+N  RA ++   +++    P 
Sbjct: 299 IDTPGLVKSFPFVLLTWTSIRLVHLWLRYQSLAVLQFNTVNLKRARIIVESHVVHSVVPG 358

Query: 152 VKEVNNEEPLFPAVPILNATFASKVQSNFVSSEAKDAAGEIEQRLQLGSKLSEII---NS 208
             + N  E +     +L   F                   ++ R+  G  L E+     S
Sbjct: 359 YVDCNKRENI-----LLWQRF-------------------MKPRIIFGVSLEELSGLEKS 394

Query: 209 KEDVLALFALYKNEGYILS----EHMGKFCVVLKENCSQLDMLKALFQVNYLYWLEKN 262
              V AL  +Y  E YIL+        +F V  K N +  D+L+ L+Q    YWLE+N
Sbjct: 395 VSKVKALLKMYTKEKYILTLNKLNKDTEFSVSFKVNATSRDVLRCLWQA---YWLEEN 449