Miyakogusa Predicted Gene

Lj2g3v1560860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1560860.1 tr|G7K401|G7K401_MEDTR Conserved oligomeric Golgi
complex subunit OS=Medicago truncatula GN=MTR_5g02,91.22,0,seg,NULL;
COG6,Conserved oligomeric Golgi complex, subunit 6; COMPONENT OF
OLIGOMERIC GOLGI COMPLEX ,CUFF.37491.1
         (695 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G31780.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Conserved ...   974   0.0  

>AT1G31780.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Conserved
           oligomeric complex COG6 (InterPro:IPR010490); Has 384
           Blast hits to 379 proteins in 190 species: Archae - 0;
           Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42;
           Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
           | chr1:11391341-11394610 FORWARD LENGTH=680
          Length = 680

 Score =  974 bits (2517), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/695 (70%), Positives = 563/695 (81%), Gaps = 15/695 (2%)

Query: 1   MGTTVAGLAPGLSRKLKKVLESRIDTPDLLSSLNTLSSFYDDNTPQARRNLRSTIEKRAL 60
           M +TV GLAPGLSRKLKKVL+ R D+PDL++SLN LSSFYD+N+  ARRNLRSTIEKRAL
Sbjct: 1   MASTV-GLAPGLSRKLKKVLDCRTDSPDLVASLNALSSFYDENSAHARRNLRSTIEKRAL 59

Query: 61  SINHEFLDASHAVQLALDSVEDEVNALAECCDRIAKSLNSCSASTGDIISTTERLKQELE 120
            IN EFL+A+ + Q+ALD VE+EVNALA+CCD+IA +L+S +A+T DIISTTERLKQELE
Sbjct: 60  QINSEFLNAADSTQIALDRVEEEVNALADCCDKIAAALSSSAATTSDIISTTERLKQELE 119

Query: 121 TTTQRQEIVACFLRDYQLSPEEINALRDEELNENFFKALSHVQEIHANCKVLLRTHHQRA 180
            TTQRQEIV CFLRDYQLS EEI ALR++ELNENFF+ALSHVQEIH+NCK+LLRTHHQRA
Sbjct: 120 VTTQRQEIVNCFLRDYQLSNEEIKALREDELNENFFQALSHVQEIHSNCKLLLRTHHQRA 179

Query: 181 GLELMDMMAVYQEGAYERLCRWVQAECRRLGDTDNPEVSELLKTAVRYLRERSVLFKYCA 240
           GLELMDMMAVYQEGAYERLCRWVQAECR+LGDTDNPEVSELL+TAVR L+ER VLFKYCA
Sbjct: 180 GLELMDMMAVYQEGAYERLCRWVQAECRKLGDTDNPEVSELLRTAVRCLKERPVLFKYCA 239

Query: 241 EEVANMRHNALFRRFISALTXXXXXXXXXXIEVHAHDPLRYVGDMLGWLHQALASERELV 300
           EEV N+RHNALFRRFISALT          IEVHAHDPLRYVGDMLGWLHQALASERELV
Sbjct: 240 EEVGNLRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELV 299

Query: 301 LVLLDPDASVDTGPTAKQFSNNYDSGSAKTESDLIFVLDRIFEGVCRPFKLRVEQVLQSQ 360
             L D D S D    AK  S N    +   ESD  FVLDRIFEGVCRPFK+RVEQVLQSQ
Sbjct: 300 HALFDID-SADHQSNAKNTSENIALKAG--ESDFTFVLDRIFEGVCRPFKVRVEQVLQSQ 356

Query: 361 PSLIVSYKLSNTLEFYCYTMSDLLGRETALCNTLWALKDAAQKTFFDILKGRGEKLLRYP 420
           PSLI+SYKL+NTLEFY YT+SDLLGR+TALCNT+  +KDAAQKTFFDILK RGEKLLRYP
Sbjct: 357 PSLIISYKLTNTLEFYSYTISDLLGRDTALCNTIGMVKDAAQKTFFDILKTRGEKLLRYP 416

Query: 421 PLVAVDLSPPSAVREGVSVLLEIIDNYNSMMVPASGQKPVFDPVISAILDPIIQMCERAA 480
           P VAVDLSPP AVREGVS+ LEII+NYNSMMV ASG+KP FDPV+SA+LDPII+MCE+AA
Sbjct: 417 PPVAVDLSPPPAVREGVSLTLEIIENYNSMMVSASGEKPAFDPVLSALLDPIIKMCEQAA 476

Query: 481 EAHKSKGAGHXXXXXXXXXXXXXXXXXXVDAILXXXXXXXXXXXXXXXXKIFLINCLCAI 540
           EAHKSK +G                   VDA+L                KIFLINCLCAI
Sbjct: 477 EAHKSKKSGQ--LPRRSRTSSDSSQLTSVDALL--SSSPSPPQNNETPSKIFLINCLCAI 532

Query: 541 QQPLSGHEVAAEYVKRLGTMIDSHLRVLVDKEADAILRKCNLSEKMPQFRNSVHNKGGDE 600
           QQPL  H+VA++YV  +G MI++H+ +LV  E D +L KC LS+KM  FR+S        
Sbjct: 533 QQPLLRHDVASQYVTNIGLMIENHINLLVQNEVDTLLHKCGLSDKMQIFRSSTS------ 586

Query: 601 VSTPLAEMEDTSPSILSECLKALFGLILGSESSLPEFEQMQVPRLRSEASIGVARSLAEA 660
              PL+E +DTSP++LSECLKA FGL+LGSE SLPEFEQ+QVP+LRSEA + VA++LAEA
Sbjct: 587 -ELPLSERQDTSPAMLSECLKAFFGLVLGSEGSLPEFEQIQVPKLRSEACVRVAKTLAEA 645

Query: 661 YELIYNAIMDPKNGYPDPRSLARHPPNQIRTILGI 695
           YE+IY A+ D +NGYPDP+SLARHPP+QIRTILGI
Sbjct: 646 YEVIYQAVTDQQNGYPDPKSLARHPPDQIRTILGI 680