Miyakogusa Predicted Gene

Lj2g3v1560720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1560720.1 FS319800.path2.1
         (79 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47570.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    54   2e-08
AT5G45840.2 | Symbols:  | Leucine-rich repeat protein kinase fam...    51   2e-07
AT5G45840.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    50   2e-07
AT2G01210.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    49   5e-07
AT5G20480.1 | Symbols: EFR | EF-TU receptor | chr5:6922497-69256...    48   2e-06
AT1G33590.1 | Symbols:  | Leucine-rich repeat (LRR) family prote...    47   2e-06
AT3G47580.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    47   3e-06
AT2G26380.1 | Symbols:  | Leucine-rich repeat (LRR) family prote...    47   3e-06
AT5G39390.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    46   4e-06
AT3G47110.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    46   5e-06
AT1G33600.1 | Symbols:  | Leucine-rich repeat (LRR) family prote...    46   6e-06
AT5G07150.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    45   8e-06

>AT3G47570.1 | Symbols:  | Leucine-rich repeat protein kinase
          family protein | chr3:17527611-17530748 FORWARD
          LENGTH=1010
          Length = 1010

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/46 (52%), Positives = 28/46 (60%)

Query: 34 ETDHFALLKFKEAISSDPYGILDSWNSSTHFCKWHGVTCSPLNQRV 79
          ETD  ALL+FK  +S D   +L SWN S   C W GVTC   N+RV
Sbjct: 23 ETDRQALLQFKSQVSEDKRVVLSSWNHSFPLCNWKGVTCGRKNKRV 68


>AT5G45840.2 | Symbols:  | Leucine-rich repeat protein kinase
          family protein | chr5:18594080-18597221 REVERSE
          LENGTH=706
          Length = 706

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 2/37 (5%)

Query: 38 FALLKFKEAISSDPYGILDSWNSS--THFCKWHGVTC 72
          F LLKF+  + SDP+G L +WN S   HFC W GVTC
Sbjct: 35 FVLLKFRARVDSDPHGTLANWNVSDHDHFCSWFGVTC 71


>AT5G45840.1 | Symbols:  | Leucine-rich repeat protein kinase
          family protein | chr5:18594080-18597221 REVERSE
          LENGTH=668
          Length = 668

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 2/37 (5%)

Query: 38 FALLKFKEAISSDPYGILDSWNSS--THFCKWHGVTC 72
          F LLKF+  + SDP+G L +WN S   HFC W GVTC
Sbjct: 35 FVLLKFRARVDSDPHGTLANWNVSDHDHFCSWFGVTC 71


>AT2G01210.1 | Symbols:  | Leucine-rich repeat protein kinase
          family protein | chr2:119509-121734 REVERSE LENGTH=716
          Length = 716

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 38 FALLKFKEAISSDPYGILDSWNSS-THFCKWHGVTCSPL 75
          FALL FK+++  DP G L++WNSS  + C W+GVTC  L
Sbjct: 26 FALLTFKQSVHDDPTGSLNNWNSSDENACSWNGVTCKEL 64


>AT5G20480.1 | Symbols: EFR | EF-TU receptor |
          chr5:6922497-6925679 FORWARD LENGTH=1031
          Length = 1031

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 34 ETDHFALLKFKEAIS-SDPYGILDSWNSSTHFCKWHGVTCSPLNQRV 79
          ETD  ALL+FK  +S ++   +L SWN S+ FC W GVTC    +RV
Sbjct: 29 ETDMQALLEFKSQVSENNKREVLASWNHSSPFCNWIGVTCGRRRERV 75


>AT1G33590.1 | Symbols:  | Leucine-rich repeat (LRR) family
          protein | chr1:12177788-12179221 FORWARD LENGTH=477
          Length = 477

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 22/37 (59%)

Query: 36 DHFALLKFKEAISSDPYGILDSWNSSTHFCKWHGVTC 72
          D   LL FK  I+ DP GIL SW   T  C W+GVTC
Sbjct: 31 DEAGLLAFKAGITRDPSGILSSWKKGTACCSWNGVTC 67


>AT3G47580.1 | Symbols:  | Leucine-rich repeat protein kinase
          family protein | chr3:17532687-17535810 FORWARD
          LENGTH=1011
          Length = 1011

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query: 34 ETDHFALLKFKEAISSDPYGILDSWNSSTHFCKWHGVTCSPLNQRV 79
          ETD  ALL+FK  +S     +L SWN+S   C W  VTC   ++RV
Sbjct: 23 ETDRQALLEFKSQVSEGKRDVLSSWNNSFPLCNWKWVTCGRKHKRV 68


>AT2G26380.1 | Symbols:  | Leucine-rich repeat (LRR) family
          protein | chr2:11226615-11228057 REVERSE LENGTH=480
          Length = 480

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 36 DHFALLKFKEAISSDPYGILDSWNSSTHFCKWHGVTCSPLNQRV 79
          D   LL FK  I+ DP GIL +W   T  C W+GV+C P   RV
Sbjct: 33 DEAGLLAFKSGITKDPSGILSTWKKGTDCCSWNGVSC-PNGNRV 75


>AT5G39390.1 | Symbols:  | Leucine-rich repeat protein kinase
          family protein | chr5:15763715-15765469 REVERSE
          LENGTH=502
          Length = 502

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query: 34 ETDHFALLKFKEAISSDPYGILDSWNSSTHFCKWHGVTCSPLNQRV 79
          ETD  ALL+FK  ++ +   +L SWN S   C W G+TC    +RV
Sbjct: 30 ETDMQALLEFKSQVTENKREVLASWNHSFPLCHWIGITCGRKQERV 75


>AT3G47110.1 | Symbols:  | Leucine-rich repeat protein kinase
          family protein | chr3:17347103-17350296 REVERSE
          LENGTH=1025
          Length = 1025

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 26/46 (56%)

Query: 34 ETDHFALLKFKEAISSDPYGILDSWNSSTHFCKWHGVTCSPLNQRV 79
          ETD  ALL+FK  +S     +L SWN S   C W GV C   ++RV
Sbjct: 38 ETDKQALLEFKSQVSETSRVVLGSWNDSLPLCSWTGVKCGLKHRRV 83


>AT1G33600.1 | Symbols:  | Leucine-rich repeat (LRR) family
          protein | chr1:12180776-12182212 FORWARD LENGTH=478
          Length = 478

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 36 DHFALLKFKEAISSDPYGILDSWNSSTHFCKWHGVTCSPLNQRV 79
          D   LL FK  I+ DP GIL SW   T  C W GV C  L  RV
Sbjct: 32 DEAGLLAFKSGITQDPTGILSSWKKGTDCCSWKGVGC--LTNRV 73


>AT5G07150.1 | Symbols:  | Leucine-rich repeat protein kinase
          family protein | chr5:2215820-2217983 FORWARD
          LENGTH=553
          Length = 553

 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 35 TDHFALLKFKEAISSDPYGILDSWNSSTHFCKWHGVTCS 73
          T+  AL+KFKE I  DP+G L +W   +H C W GV CS
Sbjct: 35 TEALALMKFKERIEIDPFGALVNWGELSH-CSWSGVVCS 72