Miyakogusa Predicted Gene
- Lj2g3v1550670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1550670.1 Non Chatacterized Hit- tr|I1J874|I1J874_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5110
PE=,85.76,0,SUBFAMILY NOT NAMED,NULL; RETICULON,Reticulon;
Nucleotid_trans,Nucleotide-diphospho-sugar transferas,CUFF.37488.1
(619 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35610.1 | Symbols: XEG113 | xyloglucanase 113 | chr2:1494761... 960 0.0
AT1G70630.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 81 2e-15
AT1G19360.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 61 2e-09
AT1G75110.1 | Symbols: RRA2 | Nucleotide-diphospho-sugar transfe... 58 2e-08
AT4G19970.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Nucleotide... 57 4e-08
AT1G56550.1 | Symbols: RXGT1 | RhamnoGalacturonan specific... 57 5e-08
AT5G44820.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 56 6e-08
AT4G01220.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 56 9e-08
AT4G01220.2 | Symbols: | Nucleotide-diphospho-sugar transferase... 54 2e-07
AT1G75120.1 | Symbols: RRA1 | Nucleotide-diphospho-sugar transfe... 54 4e-07
>AT2G35610.1 | Symbols: XEG113 | xyloglucanase 113 |
chr2:14947617-14951106 REVERSE LENGTH=644
Length = 644
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/623 (73%), Positives = 531/623 (85%), Gaps = 7/623 (1%)
Query: 4 EEVANSRPLFLTIYTVVIVGIVFSSFYIFSALYSSSTNPAAWSSFSP-------HTNDDP 56
+ NS+PLF+TIY VI+G++ SSFY+FSA+YS + +++ SF P H+
Sbjct: 10 RDATNSKPLFVTIYATVIIGVLVSSFYVFSAIYSPTNGSSSFLSFPPLSTSGRIHSLPQE 69
Query: 57 HLTDKILNSSHSATVHVAPSPSQETQHVSTRPILNVPPVSKKMPPLKSFRLTKKLVQQRV 116
+ T ++ + + P +E Q S I PP KKMPPL++F+LTK+L +RV
Sbjct: 70 NATLELPVAPPPPPQALPPPVLEEAQGNSLGKIWVSPPRDKKMPPLETFKLTKELFGERV 129
Query: 117 KDNIIIVTFGNYAFMDFILTWVKQLNDLGVSNYLVGAMDTELLEALYWKGVPVFDMGSHM 176
KDN+IIVTFGNYAFMDFILTWVK L DL +SN LVGAMDT+LLEALYWKGVPVFDMGSHM
Sbjct: 130 KDNVIIVTFGNYAFMDFILTWVKHLTDLDLSNILVGAMDTKLLEALYWKGVPVFDMGSHM 189
Query: 177 STVDVGWGSPTFHKMGREKVILINSILPFGYELLMCDTDMVWLKNPLPYLARYPEADVLT 236
STVDVGWGSPTFHKMGREKVILI+S+LPFGYELLMCDTDMVWLKNP+PYLAR+P+ADVLT
Sbjct: 190 STVDVGWGSPTFHKMGREKVILIDSVLPFGYELLMCDTDMVWLKNPMPYLARFPDADVLT 249
Query: 237 SSDQVIPTVVDDRLEVWQEVGAAYNIGIFHWRPTESAKKLAKEWIELLLADDKIWDQNGF 296
SSDQV+PTV+DD L++WQ+VGAAYNIGIFHWRPTESAKKLAKEW E+LLADDK+WDQNGF
Sbjct: 250 SSDQVVPTVIDDSLDIWQQVGAAYNIGIFHWRPTESAKKLAKEWKEILLADDKVWDQNGF 309
Query: 297 NDIVHRQLGPSVDEDSGLVYAYDGNLKLGILPSSIFCSGHTYFVQAMYQQLRLEPYAVHT 356
N+IV RQLGPSV+ DSGL YAYDGNLK+GILP+SIFCSGHTYFVQAMYQQLRLEPYAVHT
Sbjct: 310 NEIVRRQLGPSVEGDSGLFYAYDGNLKVGILPASIFCSGHTYFVQAMYQQLRLEPYAVHT 369
Query: 357 TFQYAGTEGKRHRLREAMLFRDPPEYYNPPGGFLSFKPSIPKSLLLNGNHTIESHFTLIN 416
TFQYAGTEGKRHRLRE M+F DPPEYY+ PGGF++FKPSIPKSLLL+G HTIESHF L+N
Sbjct: 370 TFQYAGTEGKRHRLREGMVFYDPPEYYDSPGGFIAFKPSIPKSLLLDGKHTIESHFILVN 429
Query: 417 YQIKQIRAALAIASLLKRTLVMPPLWCRIDRLWFPHPGVLEGSMTRQPFLCPLDHVFEVN 476
+Q+KQIR+ALAIASLL RTLVMPP+WCR+DRLWF HPG L+GSMTRQPF+CPLDHVFEVN
Sbjct: 430 HQMKQIRSALAIASLLNRTLVMPPIWCRLDRLWFGHPGTLQGSMTRQPFICPLDHVFEVN 489
Query: 477 VMLKELPEEEFGPGIDIREYSILDNPSLPSEVKNSWLDVQLCKEGTQDCNASNNSTVGKV 536
+MLKELPEEEFGPGI IREYS LDNP LP +VK SWLDVQLC+EG + C ASNN++ +V
Sbjct: 490 IMLKELPEEEFGPGIGIREYSFLDNPLLPKQVKESWLDVQLCQEGKEGCEASNNTSPSRV 549
Query: 537 LKFPKHSNEETFIKVFSSFKDVKVIQFSSMQDAFTGFMDKESEDRFRKRVKHYTGIWCCV 596
LKFPK SNE+TF +FSSF DVKVI+FSS++DAF GF DKE E+RFR+RVK Y GIWCC
Sbjct: 550 LKFPKRSNEDTFKAIFSSFDDVKVIKFSSIEDAFIGFSDKEREERFRRRVKRYVGIWCCE 609
Query: 597 LDHNPGHIYYDMYWDEKPEWKPI 619
+ PGHIYYDMYWDEKP WKP+
Sbjct: 610 ENKTPGHIYYDMYWDEKPGWKPV 632
>AT1G70630.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr1:26632118-26633991 FORWARD
LENGTH=537
Length = 537
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 99 MPPLK-SFRLTKKLVQQRVKDNIIIVTFGNYAFMDFILTWVKQLNDLGVSNYLVGAMDTE 157
+PPLK F L L K+ ++++ Y++ D +++WV +L L V N+LV A+D E
Sbjct: 252 VPPLKFPFDLESLLPLVADKNRTVVLSVAGYSYKDMLMSWVCRLRRLKVPNFLVCALDDE 311
Query: 158 LLEALYWKGVPVF---DMGSHMSTVDVGWGSPTFHKMGREKVILINSILPFGYELLMCDT 214
+ +G+PVF ++S D +GS F ++ + K + IL GY +L+ D
Sbjct: 312 TYQFSILQGLPVFFDPYAPKNISFNDCHFGSKCFQRVTKVKSRTVLKILKLGYNVLLSDV 371
Query: 215 DMVWLKNPLPYLARYPEADVLTSSDQVIPTVVDDR 249
D+ W +NPLP L + + + SD+ T +R
Sbjct: 372 DVYWFRNPLPLLQSFGPSVLAAQSDEYNTTAPINR 406
>AT1G19360.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr1:6690672-6692211 REVERSE LENGTH=428
Length = 428
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 110 KLVQQRVKDNIIIVTFGNYAFMDFILTWVKQLNDLGVSNYLVGAMDTELLEAL------- 162
K++++ D +IV N + + + +G++NYLV A+D + +E L
Sbjct: 147 KILEEIAVDKEVIVALANANVKAMLEVQIASIKRVGITNYLVVALD-DYIENLCKENDVA 205
Query: 163 YWKGVPVFDMGSHMSTVDVGWGSPTFHKMGREKVILINSILPFGYELLMCDTDMVWLKNP 222
Y+K P D VD + H + K ++ L GY +L+ D D+V+L+NP
Sbjct: 206 YYKRDPDKD-------VDTVGKTGGNHAVSGLKFRVLREFLQLGYGVLLSDVDIVFLQNP 258
Query: 223 LPYLARYPEADVLTSSDQ-------VIPTVVDDRLEVWQEVGAA-----YNIGIFHWRPT 270
+L Y ++DV + SD V D+ W +N G F+ RPT
Sbjct: 259 FSHL--YRDSDVESMSDGHDNHTAYGFNDVFDEPAMGWARYAHTMRIWVFNSGFFYLRPT 316
Query: 271 ESAKKLAKEWIELLLADDKIWDQNGFND 298
+ +L + + L+ K+WDQ FN+
Sbjct: 317 IPSIELL-DRVADRLSKAKVWDQAVFNE 343
>AT1G75110.1 | Symbols: RRA2 | Nucleotide-diphospho-sugar
transferase family protein | chr1:28194348-28195885
REVERSE LENGTH=428
Length = 428
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 110 KLVQQRVKDNIIIVTFGNYAFMDFILTWVKQLNDLGVSNYLVGAMDTELLEALYWKGVPV 169
KL+++ + IIV N + + + +G+ NYL+ A+D + +E+ V
Sbjct: 148 KLLEKVAVNKEIIVVLANSNVKPMLELQIASVKRVGIQNYLIVALD-DSMESFCESKEVV 206
Query: 170 FDMGSHMSTVDVGWGSPTFHKMGREKVILINSILPFGYELLMCDTDMVWLKNPLPYLARY 229
F VD+ S H + K ++ L GY +L+ D D+V+L+NP +L R
Sbjct: 207 FYKRDPDKAVDMVGKSGGNHAVSGLKFRVLREFLQLGYSVLLSDVDIVFLQNPFSHLHR- 265
Query: 230 PEADVLTSSDQ-------VIPTVVDDRLEVWQEVGAA-----YNIGIFHWRPTESAKKLA 277
++DV + SD V D+ W +N G F+ RPT + L
Sbjct: 266 -DSDVESMSDGHDNNTAYGFNDVFDEPSMGWARYAHTMRIWVFNSGFFYLRPTIPSIDLL 324
Query: 278 KEWIELLLADDKIWDQNGFND 298
+ + L+ + WDQ FN+
Sbjct: 325 -DRVADTLSKSEAWDQAVFNE 344
>AT4G19970.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Nucleotide-diphospho-sugar transferase, predicted
(InterPro:IPR005069); BEST Arabidopsis thaliana protein
match is: Nucleotide-diphospho-sugar transferase family
protein (TAIR:AT5G44820.1); Has 801 Blast hits to 466
proteins in 35 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 750; Viruses - 0; Other
Eukaryotes - 49 (source: NCBI BLink). |
chr4:10818242-10825343 FORWARD LENGTH=715
Length = 715
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 30/240 (12%)
Query: 80 ETQHVSTRPILNVPPVSKKMPPLKSFRLTKKLVQQRVKDNIIIVTFGNYAFMDFILTWVK 139
+ ++S+RP+L+ S + KS + L ++ +IVT N A+ +
Sbjct: 415 DVNNLSSRPLLDHTSSSSPLTRSKSISFREVLENASTENRTVIVTTLNQAWAE-----PN 469
Query: 140 QLNDLGVSNYLVGAMDTELLEAL---------YWKGVPVFDMGSHMSTVDVGW------G 184
L DL + ++ +G +LL+ + + + + ++ T +
Sbjct: 470 SLFDLFLESFRIGQGTKKLLQHVVVVCLDSKAFARCSQLHPNCYYLKTTGTDFSGEKLFA 529
Query: 185 SPTFHKMGREKVILINSILPFGYELLMCDTDMVWLKNPLPYLARYPEADVLTSSDQVIPT 244
+P + KM ++ L+ +L GY + D D++WL++P P L YP+ D + D+
Sbjct: 530 TPDYLKMMWRRIELLTQVLEMGYNFIFTDADIMWLRDPFPRL--YPDGDFQMACDRFFGD 587
Query: 245 VVDDRLEVWQEVGAAYNIGIFHWRPTESAKKLAKEWIELLLADDKIWDQNGFNDIVHRQL 304
D + W N G + + + + K W L K+ DQ+ FN I H+ L
Sbjct: 588 PHDS--DNW------VNGGFTYVKSNHRSIEFYKFWYNSRLDYPKMHDQDVFNQIKHKAL 639
>AT1G56550.1 | Symbols: RXGT1 | RhamnoGalacturonan specific
Xylosyltransferase 1 | chr1:21185836-21188070 REVERSE
LENGTH=383
Length = 383
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 105/273 (38%), Gaps = 28/273 (10%)
Query: 116 VKDNIIIVTFGNYAFMDFILTWVKQLN-DLGVSNYLVGAMDTELLEAL--YWKGVPVFDM 172
K+ +IV +Y F+ F+ W+ ++ LV A D L + W G V
Sbjct: 80 AKNETVIVCAVSYPFLPFLNNWLISISRQKHQEKVLVIAEDYATLYKVNEKWPGHAVLIP 139
Query: 173 GSHMSTVDVGWGSPTFHKMGREKVILINSILPFGYELLMCDTDMVWLKNPLPYLARYPEA 232
+ +GS F + + + +IL GY ++ D DMVWL++P YL +A
Sbjct: 140 PALDPQSAHKFGSQGFFNLTSRRPQHLLNILELGYNVMYNDVDMVWLQDPFDYLQGSYDA 199
Query: 233 DVLTSSDQVIPTVVDDRLEVWQEVGAAYNIG-IFHWRPTESAKKLAKEWIELLLAD---- 287
+ + P L G Y + R T+ K L K W+E + A
Sbjct: 200 YFMDDMIAIKPLNHSHDLPPLSRSGVTYVCSCMIFLRSTDGGKLLMKTWVEEIQAQPWNN 259
Query: 288 ---DKIWDQNGFNDIVHRQLGPSVDEDSGLVYAYDGNLKLGILPSSIFCSGHTYFVQAMY 344
K DQ FN +H+ +K+ +LP S F SG YF +
Sbjct: 260 TQAKKPHDQPAFNRALHKTA---------------NQVKVYLLPQSAFPSGGLYFRNETW 304
Query: 345 -QQLRLEPYAVHTTFQYAGTEGKRHRLREAMLF 376
+ R + VH + G + K R ++ L+
Sbjct: 305 VNETRGKHVIVHNNY-IIGYDKKMKRFQDFSLW 336
>AT5G44820.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr5:18095795-18097558 REVERSE
LENGTH=367
Length = 367
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 41/255 (16%)
Query: 63 LNSSHSATVHVAPSPSQETQHVSTRPILNVPPVS-KKMPPLKSFRLTKKLVQQRVKDNII 121
LN S+ ++ +PSP P LN +S + P SF+ + L K+N +
Sbjct: 57 LNVSNLTSLQASPSP--------LLPNLNSSEISPETTKPKLSFK--EILENASTKNNTV 106
Query: 122 IVTFGNYAFMDFILTWVKQLNDLGVSNYLVGAMDTELLE--ALYWKGVPVFDMGS----- 174
I+T N A+ + L DL + ++ +G +LL+ + + F+ S
Sbjct: 107 IITTLNQAWAE-----PNSLFDLFLESFRIGQGTQQLLKHVVVVCLDIKAFERCSQLHTN 161
Query: 175 --HMSTVDVG------WGSPTFHKMGREKVILINSILPFGYELLMCDTDMVWLKNPLPYL 226
H+ T + + +P + KM ++ L+ +L G+ + D D++WL++P P L
Sbjct: 162 CYHIETSETDFSGEKVYNTPDYLKMMWARIDLLTQVLEMGFNFIFTDADIMWLRDPFPRL 221
Query: 227 ARYPEADVLTSSDQVIPTVVDDRLEVWQEVGAAYNIGIFHWRPTESAKKLAKEWIELLLA 286
YP+ D + D+ D + W G Y R + + K W + L
Sbjct: 222 --YPDGDFQMACDRFFGNPYDS--DNWVNGGFTY------VRSNNRSIEFYKFWHKSRLD 271
Query: 287 DDKIWDQNGFNDIVH 301
+ DQ+ FN I H
Sbjct: 272 YPDLHDQDVFNRIKH 286
>AT4G01220.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr4:513431-515648 REVERSE LENGTH=360
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 104/270 (38%), Gaps = 24/270 (8%)
Query: 116 VKDNIIIVTFGNYAFMDFILTWVKQLNDLGVSNY-LVGAMDTELLEAL--YWKGVPVFDM 172
K+ +IV +Y ++ F+ W+ ++ + LV A D L + W G V
Sbjct: 91 AKNGTVIVCAVSYPYLPFLNNWLISVSRQKHQDQVLVIAEDYATLYKVNEKWPGHAVLIP 150
Query: 173 GSHMSTVDVGWGSPTFHKMGREKVILINSILPFGYELLMCDTDMVWLKNPLPYLARYPEA 232
+ S +GS F + + IL GY ++ D DMVWL++P YL +A
Sbjct: 151 PALDSQTAHKFGSQGFFNFTARRPQHLLEILELGYNVMYNDVDMVWLQDPFQYLEGKHDA 210
Query: 233 DVLTSSDQVIPTVVDDRLEVWQEVGAAYNIG-IFHWRPTESAKKLAKEWIELLLAD---- 287
+ + P L + G Y + RPT AK L K+WIE L
Sbjct: 211 YFMDDMTAIKPLDHSHDLPPPGKKGRTYICSCMIFLRPTNGAKLLMKKWIEELETQPWSR 270
Query: 288 -DKIWDQNGFNDIVHRQLGPSVDEDSGLVYAYDGNLKLGILPSSIFCSGHTYFVQAMYQQ 346
K DQ GFN +++ + + +L + F +G YF + +
Sbjct: 271 AKKANDQPGFNWALNKTA---------------NQVDMYLLSQAAFPTGGLYFKNKTWVK 315
Query: 347 LRLEPYAVHTTFQYAGTEGKRHRLREAMLF 376
+A+ G E K R R+ L+
Sbjct: 316 ETKGKHAIIHNNYIVGFEKKIKRFRDFNLW 345
>AT4G01220.2 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr4:514146-515648 REVERSE LENGTH=299
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 9/191 (4%)
Query: 116 VKDNIIIVTFGNYAFMDFILTWVKQLNDLGVSN-YLVGAMDTELLEAL--YWKGVPVFDM 172
K+ +IV +Y ++ F+ W+ ++ + LV A D L + W G V
Sbjct: 91 AKNGTVIVCAVSYPYLPFLNNWLISVSRQKHQDQVLVIAEDYATLYKVNEKWPGHAVLIP 150
Query: 173 GSHMSTVDVGWGSPTFHKMGREKVILINSILPFGYELLMCDTDMVWLKNPLPYLARYPEA 232
+ S +GS F + + IL GY ++ D DMVWL++P YL +A
Sbjct: 151 PALDSQTAHKFGSQGFFNFTARRPQHLLEILELGYNVMYNDVDMVWLQDPFQYLEGKHDA 210
Query: 233 DVLTSSDQVIPTVVDDRLEVWQEVGAAYNIG-IFHWRPTESAKKLAKEWIELLLAD---- 287
+ + P L + G Y + RPT AK L K+WIE L
Sbjct: 211 YFMDDMTAIKPLDHSHDLPPPGKKGRTYICSCMIFLRPTNGAKLLMKKWIEELETQPWSR 270
Query: 288 -DKIWDQNGFN 297
K DQ GFN
Sbjct: 271 AKKANDQPGFN 281
>AT1G75120.1 | Symbols: RRA1 | Nucleotide-diphospho-sugar
transferase family protein | chr1:28197022-28198656
REVERSE LENGTH=402
Length = 402
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 110 KLVQQRVKDNIIIVTFGNYAFMDFILTWVKQLNDLGVSNYLVGAMDTELL------EALY 163
KL+++ + IIV N + + + +G+ NYLV +D L E Y
Sbjct: 123 KLLEKVAVNKEIIVVLANNNVKPMLEVQIASVKRVGIQNYLVVPLDDSLESFCKSNEVAY 182
Query: 164 WKGVPVFDMGSHMSTVDVGWGSPTFHKMGREKVILINSILPFGYELLMCDTDMVWLKNPL 223
+K P + +DV S + K ++ L GY +L+ D D+V+L+NP
Sbjct: 183 YKRDP-------DNAIDVVGKSRRSSDVSGLKFRVLREFLQLGYGVLLSDVDIVFLQNPF 235
Query: 224 PYLARYPEADVLTSSD-----------QVI--PTVVDDRLEVWQEVGAAYNIGIFHWRPT 270
+L Y ++DV + SD V PT+ R V+ +N G F+ RPT
Sbjct: 236 GHL--YRDSDVESMSDGHDNNTAYGFNDVFDDPTMTRSR-TVYTNRIWVFNSGFFYLRPT 292
Query: 271 ESAKKLAKEWIELLLADDKIWDQNGFN 297
+ +L + + L+ WDQ FN
Sbjct: 293 LPSIELL-DRVTDTLSKSGGWDQAVFN 318