Miyakogusa Predicted Gene

Lj2g3v1550560.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1550560.2 Non Chatacterized Hit- tr|I1J6S2|I1J6S2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32505
PE,48.51,4e-19,seg,NULL; FDF,FDF domain; SCD6 PROTEIN-RELATED,NULL;
DFDF,DFDF domain; FFD,FFD box,CUFF.37454.2
         (186 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G45330.1 | Symbols: DCP5-L | decapping 5-like | chr5:18363701...   101   2e-22
AT1G26110.2 | Symbols: DCP5 | decapping 5 | chr1:9024616-9027556...   100   7e-22
AT1G26110.1 | Symbols: DCP5 | decapping 5 | chr1:9024616-9027556...   100   8e-22

>AT5G45330.1 | Symbols: DCP5-L | decapping 5-like |
           chr5:18363701-18366544 REVERSE LENGTH=571
          Length = 571

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 77/136 (56%), Gaps = 20/136 (14%)

Query: 31  APLLSLPTSVHKYSAP----QFTEEFDFEAMNEKFKKDEVWGSLGKAATKIEGVEGNEPP 86
           APLL LP S H+   P    ++TEEFDFEAMNEKFKK E+WG LG+   + +   G E  
Sbjct: 406 APLLPLPVSAHQSRIPSSSIEYTEEFDFEAMNEKFKKSELWGYLGRNNQRNQNDYGEE-- 463

Query: 87  LNVCNRECDHGMIPNP--KSAYKKDDFFDTISCNSMTRGSRNGQH--RLSERMKLDTETF 142
                      + PN   K AY KDDFFDTISCN + R +R+GQ   +  E M+   E F
Sbjct: 464 ---------TAIEPNAEGKPAYNKDDFFDTISCNQLDRVARSGQQHNQFPEHMRQVPEAF 514

Query: 143 G-NFQQRPIAYGGYGA 157
           G NFQ+ P    G GA
Sbjct: 515 GNNFQRPPPLQPGQGA 530


>AT1G26110.2 | Symbols: DCP5 | decapping 5 | chr1:9024616-9027556
           REVERSE LENGTH=605
          Length = 605

 Score =  100 bits (248), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 9/101 (8%)

Query: 47  QFTEEFDFEAMNEKFKKDEVWGSLGKAATKIEGVEGNEPPLNVCNRECDHGMIPN--PKS 104
           +FTE+FDF AMNEKF KDEVWG LGK+ T ++G E ++ P        D   +P    K 
Sbjct: 454 KFTEDFDFTAMNEKFNKDEVWGHLGKSTT-LDGDEDDDSP------TVDEAELPKIEAKP 506

Query: 105 AYKKDDFFDTISCNSMTRGSRNGQHRLSERMKLDTETFGNF 145
            Y KDDFFD++S N++ R S+N + R SE+ KLDTETFG F
Sbjct: 507 VYNKDDFFDSLSSNTIDRESQNSRPRFSEQRKLDTETFGEF 547


>AT1G26110.1 | Symbols: DCP5 | decapping 5 | chr1:9024616-9027556
           REVERSE LENGTH=611
          Length = 611

 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 9/101 (8%)

Query: 47  QFTEEFDFEAMNEKFKKDEVWGSLGKAATKIEGVEGNEPPLNVCNRECDHGMIPN--PKS 104
           +FTE+FDF AMNEKF KDEVWG LGK+ T ++G E ++ P        D   +P    K 
Sbjct: 460 KFTEDFDFTAMNEKFNKDEVWGHLGKSTT-LDGDEDDDSP------TVDEAELPKIEAKP 512

Query: 105 AYKKDDFFDTISCNSMTRGSRNGQHRLSERMKLDTETFGNF 145
            Y KDDFFD++S N++ R S+N + R SE+ KLDTETFG F
Sbjct: 513 VYNKDDFFDSLSSNTIDRESQNSRPRFSEQRKLDTETFGEF 553