Miyakogusa Predicted Gene
- Lj2g3v1550110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1550110.1 Non Chatacterized Hit- tr|I1L7N9|I1L7N9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,79.4,0,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.37414.1
(685 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 785 0.0
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 670 0.0
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 670 0.0
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-122
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 411 e-115
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 367 e-101
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 364 e-100
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 358 7e-99
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 8e-99
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 356 3e-98
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 3e-98
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 5e-97
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 5e-96
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 348 6e-96
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 3e-95
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 345 6e-95
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 8e-95
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 2e-94
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 6e-94
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 339 4e-93
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 6e-93
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 9e-93
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 5e-92
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 8e-92
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 333 3e-91
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 332 5e-91
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 7e-91
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 1e-90
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 6e-90
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 4e-89
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 325 5e-89
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 323 3e-88
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 323 3e-88
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 5e-87
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 6e-87
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 9e-87
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 318 1e-86
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 3e-86
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 316 4e-86
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 2e-85
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 310 2e-84
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 3e-84
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 308 6e-84
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 5e-83
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 305 1e-82
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 1e-82
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 302 4e-82
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 1e-81
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 300 2e-81
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 6e-81
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 8e-81
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 298 1e-80
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 2e-80
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 3e-80
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 4e-80
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 7e-80
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 6e-79
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 1e-78
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 5e-78
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 7e-78
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 6e-77
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 1e-76
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 2e-76
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 282 7e-76
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 1e-75
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 280 3e-75
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 279 4e-75
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 278 7e-75
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 9e-75
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 1e-73
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 1e-73
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 1e-73
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 274 1e-73
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 274 1e-73
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 267 2e-71
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 267 2e-71
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 4e-71
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 6e-71
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 265 1e-70
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 265 1e-70
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 1e-69
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 3e-68
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 256 5e-68
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 7e-68
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 254 1e-67
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 2e-67
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 4e-67
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 8e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 2e-66
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 2e-63
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 240 2e-63
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 239 4e-63
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 239 4e-63
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 8e-63
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 4e-61
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 5e-61
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 6e-61
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 8e-61
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 9e-60
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 4e-58
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 8e-56
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 5e-55
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 5e-55
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 9e-53
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 6e-49
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 3e-47
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 186 7e-47
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 8e-47
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 160 4e-39
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 6e-36
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 5e-29
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 7e-29
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 125 9e-29
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 120 2e-27
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 119 8e-27
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 5e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 107 3e-23
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 3e-22
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 3e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 3e-21
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 9e-21
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 98 2e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 5e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 97 5e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 5e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 96 6e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 96 1e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 94 3e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 92 2e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 3e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-17
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 86 9e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 85 2e-16
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 82 1e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-15
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 80 6e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 75 1e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 70 5e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 68 2e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 3e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 66 7e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 5e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 9e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 62 1e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 62 1e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 61 3e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 6e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 7e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 8e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 8e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 51 2e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/660 (56%), Positives = 496/660 (75%), Gaps = 8/660 (1%)
Query: 8 SLKNFVYHGHLSNAFKSF--LHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQ 65
SL + HGHL +AFK+F L +Q +A S H C++V + G Q
Sbjct: 9 SLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLS----ACVDVRAFLAGVQ 64
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNEL 125
+HA IS G + +++++P+LV+FY+ FNL ++A + E+S L PL WN+LI+ + +NEL
Sbjct: 65 VHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNEL 124
Query: 126 FVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNA 185
F E ++AY++M+ K + PD FTYPSVLKACGE LD A G VH +IEV S SL+V NA
Sbjct: 125 FEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNA 184
Query: 186 LVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
L+SMY +F + +AR LFD M ERD VSWN +I+CYAS G W EAF+LF++M GVE++
Sbjct: 185 LISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVS 244
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNACSHIGALKLGKEIHG 304
+I WN ++GG L GN+ GAL L+S+MR LD VAM++GL ACS IGA++LGKEIHG
Sbjct: 245 VITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHG 304
Query: 305 HAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDE 364
A+ + +D +DNVRN LITMYS+C DL HA ++F++ EE L TWN+++SG+A +++ +E
Sbjct: 305 LAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEE 364
Query: 365 VSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLV 424
S L R+ML G +PN +T+AS+LPLCARIANLQHGKEFHCYI++R+ FK+Y +LWN+LV
Sbjct: 365 ASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLV 424
Query: 425 DMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHV 484
D+YA+SGK++ AK+V D +++RDEVTYT++I GYG +GEG +AL +F+EM + IKPDHV
Sbjct: 425 DVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHV 484
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
+VAVL+ACSHS LV +G+ LF +M +YGI P ++H++CM DL+GRAG L KAK+II
Sbjct: 485 TVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHN 544
Query: 545 MPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSEL 604
MPYKP+ A WATL+ AC IHGNT +G+WAA KLLEMKP++ GYY+LIANMYAAAG WS+L
Sbjct: 545 MPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKL 604
Query: 605 AEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKD-AGY 663
AEVRT MR+LGVKK PGCAW+D FS F VGDTS+P A YPL+DGLN+LMKD AGY
Sbjct: 605 AEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGY 664
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/640 (51%), Positives = 453/640 (70%), Gaps = 15/640 (2%)
Query: 8 SLKNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLH 67
S ++ + HG L AF++F +++ + G C+ N PG+QLH
Sbjct: 52 SFRHCISHGQLYEAFRTFSLLRYQS-----GSHEFVLYSSASLLSTCVGFNEFVPGQQLH 106
Query: 68 AQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFV 127
A IS G + +++++P+LV+FY+ FNL D+A +TE+S L PL WN+LI ++RN+ F
Sbjct: 107 AHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQ 166
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALV 187
E++S Y++M+ K + DEFTYPSV+KAC LLD A G VH +IEV S +L+V NAL+
Sbjct: 167 ESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALI 226
Query: 188 SMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNII 247
SMY +FGK++VAR LFD M ERD VSWN II+CY S GEAFKL +RM GVE +I+
Sbjct: 227 SMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIV 286
Query: 248 IWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNACSHIGALKLGKEIHGHA 306
WNT+AGG L AGN+ GAL + MR ++ + VAM+ GL ACSHIGALK GK H
Sbjct: 287 TWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLV 346
Query: 307 VRT---GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
+R+ D+ DNVRN+LITMYSRC DL HA+++FQ++E L TWN+++SGFA+ +R +
Sbjct: 347 IRSCSFSHDI-DNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSE 405
Query: 364 EVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTL 423
E SFL ++ML G PN++T+AS+LPL AR+ NLQHGKEFHCYI++R+ +K+ L+LWN+L
Sbjct: 406 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 424 VDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDH 483
VDMYA+SG+++ AKRVFDS+ +RD+VTYT++I GYG G+G++AL F++M + IKPDH
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 484 VAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIIT 543
V MVAVL+ACSHS LV +G LF +M +GI R+EHY+CM DL+ RAG L+KA++I
Sbjct: 526 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 544 RMPYKPTPAMWATLIGACRIHGNTVLGEWAAGK-LLEMKPDHSGYYILIANMYAAAGCWS 602
+PY+P+ AM ATL+ AC IHGNT +GEWAA K LLE KP+H G+Y+L+A+MYA G WS
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 603 ELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNP 642
+L V+T + +LGV+KA A ++ E G+ + P
Sbjct: 646 KLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKP 681
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/640 (51%), Positives = 453/640 (70%), Gaps = 15/640 (2%)
Query: 8 SLKNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLH 67
S ++ + HG L AF++F +++ + G C+ N PG+QLH
Sbjct: 52 SFRHCISHGQLYEAFRTFSLLRYQS-----GSHEFVLYSSASLLSTCVGFNEFVPGQQLH 106
Query: 68 AQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFV 127
A IS G + +++++P+LV+FY+ FNL D+A +TE+S L PL WN+LI ++RN+ F
Sbjct: 107 AHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQ 166
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALV 187
E++S Y++M+ K + DEFTYPSV+KAC LLD A G VH +IEV S +L+V NAL+
Sbjct: 167 ESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALI 226
Query: 188 SMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNII 247
SMY +FGK++VAR LFD M ERD VSWN II+CY S GEAFKL +RM GVE +I+
Sbjct: 227 SMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIV 286
Query: 248 IWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNACSHIGALKLGKEIHGHA 306
WNT+AGG L AGN+ GAL + MR ++ + VAM+ GL ACSHIGALK GK H
Sbjct: 287 TWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLV 346
Query: 307 VRT---GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
+R+ D+ DNVRN+LITMYSRC DL HA+++FQ++E L TWN+++SGFA+ +R +
Sbjct: 347 IRSCSFSHDI-DNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSE 405
Query: 364 EVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTL 423
E SFL ++ML G PN++T+AS+LPL AR+ NLQHGKEFHCYI++R+ +K+ L+LWN+L
Sbjct: 406 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 424 VDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDH 483
VDMYA+SG+++ AKRVFDS+ +RD+VTYT++I GYG G+G++AL F++M + IKPDH
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 484 VAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIIT 543
V MVAVL+ACSHS LV +G LF +M +GI R+EHY+CM DL+ RAG L+KA++I
Sbjct: 526 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 544 RMPYKPTPAMWATLIGACRIHGNTVLGEWAAGK-LLEMKPDHSGYYILIANMYAAAGCWS 602
+PY+P+ AM ATL+ AC IHGNT +GEWAA K LLE KP+H G+Y+L+A+MYA G WS
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 603 ELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNP 642
+L V+T + +LGV+KA A ++ E G+ + P
Sbjct: 646 KLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKP 681
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/625 (36%), Positives = 357/625 (57%), Gaps = 13/625 (2%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C ++S+ G+ HA + GF N + LV+ Y+R DA V + S + +
Sbjct: 136 ACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS 195
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRK-QVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN +I + + AL + +M + PD T +VL C L + G ++H
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
M ++FV N LV MYAK G ++ A +F NM +D VSWN +++ Y+ G + +A
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNAC 290
+LFE+MQEE ++M+++ W+ GY G AL + QM +S I + V ++ L+ C
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDN-------VRNALITMYSRCGDLGHAYMLFQRM-- 341
+ +GAL GKEIH +A++ D+ N V N LI MY++C + A +F +
Sbjct: 376 ASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP 435
Query: 342 EEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAE--PNYVTIASVLPLCARIANLQH 399
+E+ ++TW M+ G++ ++ L +M E + PN TI+ L CA +A L+
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
Query: 400 GKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYG 459
GK+ H Y ++ +Q L + N L+DMYA+ G + +A+ VFD++ ++EVT+T+++ GYG
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYG 555
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI 519
M G G+ AL IF+EM + K D V ++ VL ACSHSG++ QG F M +G+ P
Sbjct: 556 MHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGP 615
Query: 520 EHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLE 579
EHYAC+ DL GRAG LN A +I MP +P P +W + CRIHG LGE+AA K+ E
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITE 675
Query: 580 MKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDT 639
+ +H G Y L++N+YA AG W ++ +R+ MR+ GVKK PGC+WV+ + FFVGD
Sbjct: 676 LASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDK 735
Query: 640 SNPHAGEIYPLMDGLNELMKDAGYI 664
++PHA EIY ++ + +KD GY+
Sbjct: 736 THPHAKEIYQVLLDHMQRIKDIGYV 760
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/576 (28%), Positives = 254/576 (44%), Gaps = 95/576 (16%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTE--SSSSLEPLHWNM 115
++S K +H +++S G + L+S Y A + S HWN
Sbjct: 39 KTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
LI + N + L + M PD +T+P V KACGE+ G H V
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
++FV NALV+MY++ L AR +FD M D VSWN+II YA G A ++F
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGA 295
RM E D++ +V L C+ +G
Sbjct: 218 RMTNE---------------------------------FGCRPDNITLVNVLPPCASLGT 244
Query: 296 LKLGKEIHGHAVRTGFDVLDN--VRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
LGK++H AV + +++ N V N L+ MY++CG + A +F M K +++WNAM+
Sbjct: 245 HSLGKQLHCFAVTS--EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 354 SGFAHMDRVDEVSFLF-----------------------------------RQMLHEGAE 378
+G++ + R ++ LF RQML G +
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 379 PNYVTIASVLPLCARIANLQHGKEFHCYIMK------REQFKEYLLLWNTLVDMYARSGK 432
PN VT+ SVL CA + L HGKE HCY +K + + ++ N L+DMYA+ K
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 433 VLEAKRVFDSLT--RRDEVTYTAMIRGYGMKGEGQMALNI----FEEMCKFKIKPDHVAM 486
V A+ +FDSL+ RD VT+T MI GY G+ AL + FEE C + +P+ +
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDC--QTRPNAFTI 480
Query: 487 VAVLTAC-SHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
L AC S + L Q+ + + +P C+ D++ + G ++ A+ + M
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM 539
Query: 546 PYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMK 581
K W +L+ +HG GE A G EM+
Sbjct: 540 MAK-NEVTWTSLMTGYGMHG---YGEEALGIFDEMR 571
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/614 (35%), Positives = 353/614 (57%), Gaps = 9/614 (1%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSF---YARFNLFDDACIVTESSSSLEPLH 112
N +L + +HAQ+I +G L +L+ F F A V ++ L
Sbjct: 42 NCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLI 101
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN + + V AL Y M+ ++P+ +T+P VLK+C + G ++H +
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
L+VH +L+SMY + G+LE A +FD P RD VS+ +I YASRG A K
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACS 291
LF+ + + +++ WN M GY GN+K AL+L M +T++ D MV ++AC+
Sbjct: 222 LFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
G+++LG+++H GF + NALI +YS+CG+L A LF+R+ K +I+WN
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR- 410
++ G+ HM+ E LF++ML G PN VT+ S+LP CA + + G+ H YI KR
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
+ L +L+DMYA+ G + A +VF+S+ + ++ AMI G+ M G + ++
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
F M K I+PD + V +L+ACSHSG++ G+ +F+ M DY + P++EHY CM DL G
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Query: 531 RAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYIL 590
+GL +A+E+I M +P +W +L+ AC++HGN LGE A L++++P++ G Y+L
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577
Query: 591 IANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPL 650
++N+YA+AG W+E+A+ R + + G+KK PGC+ +++ F +GD +P EIY +
Sbjct: 578 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 637
Query: 651 MDGLNELMKDAGYI 664
++ + L++ AG++
Sbjct: 638 LEEMEVLLEKAGFV 651
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 206/473 (43%), Gaps = 70/473 (14%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLE--- 109
C + G+Q+H V+ LG D + + L+S Y + +DA V + S +
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 202
Query: 110 ------------------------PLH----WNMLISMFVRNELFVEALSAYRKMLRKQV 141
P+ WN +IS + + EAL ++ M++ V
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 142 IPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARH 201
PDE T +V+ AC + G +VH I+ G +L + NAL+ +Y+K G+LE A
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 202 LFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGN 261
LF+ +P +D +SWNT+I Y + EA LF+ M G N
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN---------------- 366
Query: 262 FKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVR--TGFDVLDNVRN 319
V M+ L AC+H+GA+ +G+ IH + + G ++R
Sbjct: 367 ------------------DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 320 ALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEP 379
+LI MY++CGD+ A+ +F + K L +WNAM+ GFA R D LF +M G +P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 380 NYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKV-LEAKR 438
+ +T +L C+ L G+ + + + L + ++D+ SG +
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEM 528
Query: 439 VFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLT 491
+ D V + ++++ M G ++ + E + KI+P++ +L+
Sbjct: 529 INMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL--IKIEPENPGSYVLLS 579
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/614 (32%), Positives = 325/614 (52%), Gaps = 37/614 (6%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C +L G+QLHA LGF N + L++ YA+ + A + +
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN+++ + + + +R+M ++++P+++TYPS+LK C L D G ++H I
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ + +V + L+ MYAK GKL D +W+ +I +A +
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKL--------------DTAWDILIR-FAGK-------- 554
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACS 291
+++ W TM GY AL QM I D V + ++AC+
Sbjct: 555 ------------DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 602
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
+ ALK G++IH A +GF +NAL+T+YSRCG + +Y+ F++ E I WNA
Sbjct: 603 GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNA 662
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
++SGF +E +F +M EG + N T S + + AN++ GK+ H I K
Sbjct: 663 LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT- 721
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIF 471
+ + N L+ MYA+ G + +A++ F ++ ++EV++ A+I Y G G AL+ F
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 472 EEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGR 531
++M ++P+HV +V VL+ACSH GLV +G F+ M +YG+ P+ EHY C+ D+ R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 532 AGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILI 591
AGLL++AKE I MP KP +W TL+ AC +H N +GE+AA LLE++P+ S Y+L+
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 592 ANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLM 651
+N+YA + W R M+ GVKK PG +W++V F+VGD ++P A EI+
Sbjct: 902 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYF 961
Query: 652 DGLNELMKDAGYIR 665
L + + GY++
Sbjct: 962 QDLTKRASEIGYVQ 975
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/595 (24%), Positives = 249/595 (41%), Gaps = 94/595 (15%)
Query: 53 GCINVN-SLSPGKQLHAQVISLGFDQNTIMLPRLVSF-------YARFNLFDDACIVTES 104
GC+ N SL G++LH+Q++ LG D N + +L F Y F +FD+ T
Sbjct: 93 GCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT-- 150
Query: 105 SSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC-GELLDCAS 163
WN +I L E + +M+ + V P+E T+ VL+AC G +
Sbjct: 151 -----IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 164 GVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYAS 223
++H I + S V N L+ +Y++ G +++AR +FD + +D SW +IS +
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 224 RGTWGEAFKLFERM--------------------QEEGVEM---------------NIII 248
EA +LF M + E +E+ + +
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 249 WNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN-------------------- 288
N + Y H GN A + S M + + ++ GL+
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 289 ------------ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYM 336
ACS G L G+++H + + GF + + AL+ +Y++C D+ A
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 337 LFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIAN 396
F E + ++ WN ML + +D + +FRQM E PN T S+L C R+ +
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 397 LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIR 456
L+ G++ H I+K F+ + + L+DMYA+ GK+ A + +D V++T MI
Sbjct: 506 LELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 457 GYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGII 516
GY AL F +M I+ D V + ++AC+ + +GQ + + G
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFS 623
Query: 517 PRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPA----MWATLIGACRIHGNT 567
+ + L+ R G + + + + ++ T A W L+ + GN
Sbjct: 624 SDLPFQNALVTLYSRCGKIEE-----SYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/513 (23%), Positives = 219/513 (42%), Gaps = 37/513 (7%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + SL G+QLH V+ LGF +T + LVS Y A + + S + +
Sbjct: 297 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT 356
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N LI+ + +A+ +++M + PD T S++ AC G ++H
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ + AL+++YAK +E A F + V WN ++ Y +F+
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
+F +MQ E + N + ++ L C
Sbjct: 477 IFRQMQIEEIVPNQYTYPSI----------------------------------LKTCIR 502
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+G L+LG++IH ++T F + V + LI MY++ G L A+ + R K +++W M
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
++G+ + D+ FRQML G + V + + + CA + L+ G++ H
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV-SG 621
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
F L N LV +Y+R GK+ E+ F+ D + + A++ G+ G + AL +F
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
M + I ++ + + A S + + QG+ + ++ G E + ++ +
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKC 740
Query: 533 GLLNKAKEIITRMPYKPTPAMWATLIGACRIHG 565
G ++ A++ + K W +I A HG
Sbjct: 741 GSISDAEKQFLEVSTK-NEVSWNAIINAYSKHG 772
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/638 (30%), Positives = 347/638 (54%), Gaps = 43/638 (6%)
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNE 124
Q HA+++ G + + +L++ Y+ +N F+DA +V +S ++ LI + +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 125 LFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHN 184
LF +++ + +M +IPD P++ K C EL G ++H V + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 185 ALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM 244
++ MY + G++ AR +FD M ++D V+ + ++ YA +G E ++ M+ G+E
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL----DHVAMVVGLNACSHIGALKLGK 300
NI+ WN + G+ +G K A+ + ++ HL D V + L + L +G+
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIH---HLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 301 EIHGHAVRTG------------------------------FDVLD-NVRNALITMYSRCG 329
IHG+ ++ G F++++ V NA IT SR G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 330 DLGHAYMLFQRMEEK----GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIA 385
+ A +F+ +E+ +++W ++++G A + E LFR+M G +PN+VTI
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 386 SVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTR 445
S+LP C IA L HG+ H + + R + + + + L+DMYA+ G++ ++ VF+ +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAV-RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 446 RDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVL 505
++ V + +++ G+ M G+ + ++IFE + + ++KPD ++ ++L+AC GL +G
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 506 FQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHG 565
F+ M ++YGI PR+EHY+CM +L GRAG L +A ++I MP++P +W L+ +CR+
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 566 NTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWV 625
N L E AA KL ++P++ G Y+L++N+YAA G W+E+ +R M +LG+KK PGC+W+
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 626 DVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
V GD S+P +I MD +++ M+ +G+
Sbjct: 632 QVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 142/338 (42%), Gaps = 48/338 (14%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFY----ARFNLFDDAC----IVTESSSSLEPLHWN 114
GK H I F+Q +M + + Y +R L D A + E + L + W
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AIEV 173
+I+ +N +EAL +R+M V P+ T PS+L ACG + G H A+ V
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ ++ V +AL+ MYAK G++ +++ +F+ MP ++ V WN++++ ++ G E +
Sbjct: 418 HLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSI 476
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI 293
FE S MRT + D ++ L+AC +
Sbjct: 477 FE----------------------------------SLMRTRLKPDFISFTSLLSACGQV 502
Query: 294 GALKLG-KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME-EKGLITWNA 351
G G K + G + ++ + R G L AY L + M E W A
Sbjct: 503 GLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGA 562
Query: 352 MLSGFAHMDRVDEVSFLFRQMLH-EGAEP-NYVTIASV 387
+L+ + VD ++ H E P YV ++++
Sbjct: 563 LLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNI 600
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 36/229 (15%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C N+ +L G+ H + + N + L+ YA+ + + IV + +
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI- 171
WN L++ F + E +S + ++R ++ PD ++ S+L ACG++ G + K +
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP-ERDDVSWNTII-SC--------- 220
E + L ++ +V++ + GKL+ A L MP E D W ++ SC
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 221 ------------------------YASRGTWGEAFKLFERMQEEGVEMN 245
YA++G W E + +M+ G++ N
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/618 (34%), Positives = 344/618 (55%), Gaps = 20/618 (3%)
Query: 57 VNSLSPGKQLHAQVI---SLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
+ S S KQLHAQ I SL +I ++S Y L +A ++ ++ S L W
Sbjct: 18 IKSKSQAKQLHAQFIRTQSLSHTSASI----VISIYTNLKLLHEALLLFKTLKSPPVLAW 73
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
+I F LF +AL+++ +M PD +PSVLK+C ++D G VH I
Sbjct: 74 KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133
Query: 174 GSMGWSLFVHNALVSMYAKF----GKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG- 228
M L+ NAL++MYAK K+ V ++FD MP+R S + + +G
Sbjct: 134 LGMDCDLYTGNALMNMYAKLLGMGSKISVG-NVFDEMPQRTSNSGDEDVKAETCIMPFGI 192
Query: 229 -EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVG 286
++FE M + +++ +NT+ GY +G ++ AL+++ +M T + D +
Sbjct: 193 DSVRRVFEVMPRK----DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
L S + GKEIHG+ +R G D + ++L+ MY++ + + +F R+ +
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
I+WN++++G+ R +E LFRQM+ +P V +SV+P CA +A L GK+ H Y
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM 466
++ R F + + + LVDMY++ G + A+++FD + DEV++TA+I G+ + G G
Sbjct: 369 VL-RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
A+++FEEM + +KP+ VA VAVLTACSH GLV + F M YG+ +EHYA +A
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 487
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSG 586
DL GRAG L +A I++M +PT ++W+TL+ +C +H N L E A K+ + ++ G
Sbjct: 488 DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMG 547
Query: 587 YYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGE 646
Y+L+ NMYA+ G W E+A++R MR G++K P C+W+++ + F GD S+P +
Sbjct: 548 AYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDK 607
Query: 647 IYPLMDGLNELMKDAGYI 664
I + + E M+ GY+
Sbjct: 608 INEFLKAVMEQMEKEGYV 625
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 187/419 (44%), Gaps = 70/419 (16%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARF----------NLFD------- 96
C + L G+ +H ++ LG D + L++ YA+ N+FD
Sbjct: 115 CTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTS 174
Query: 97 ---------DACI----------VTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKML 137
+ CI V E + + +N +I+ + ++ ++ +AL R+M
Sbjct: 175 NSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234
Query: 138 RKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLE 197
+ PD FT SVL E +D G E+H + + +++ ++LV MYAK ++E
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294
Query: 198 VARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYL 257
+ +F + RD +SWN++++ Y G + EA +LF +M V+ + ++++
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV----- 349
Query: 258 HAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNV 317
+ AC+H+ L LGK++HG+ +R GF +
Sbjct: 350 -----------------------------IPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 318 RNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGA 377
+AL+ MYS+CG++ A +F RM ++W A++ G A E LF +M +G
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 378 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEA 436
+PN V +VL C+ + + + + K + L + + D+ R+GK+ EA
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 5/224 (2%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C ++ +L GKQLH V+ GF N + LV Y++ A + + + L+ +
Sbjct: 352 ACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS 411
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGE--LLDCASGVEVHKA 170
W +I + EA+S + +M R+ V P++ + +VL AC L+D A G +
Sbjct: 412 WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY-FNSM 470
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNM-PERDDVSWNTIISCYASRGTWGE 229
+V + L + A+ + + GKLE A + M E W+T++S +
Sbjct: 471 TKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLEL 530
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR 273
A K+ E++ E N+ + M Y G +K KL +MR
Sbjct: 531 AEKVAEKIFTVDSE-NMGAYVLMCNMYASNGRWKEMAKLRLRMR 573
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 327/602 (54%), Gaps = 36/602 (5%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRN 123
KQ+HA+++ LG + ++ +L+ + F A V + + WN +I + RN
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 124 ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH 183
F +AL Y M +V PD FT+P +LKAC L G VH + +FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N L+++YAK +L AR +F+ +P L ER
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLP-------------------------LPER------- 185
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNACSHIGALKLGKEI 302
I+ W + Y G AL++ SQMR + D VA+V LNA + + LK G+ I
Sbjct: 186 -TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
H V+ G ++ ++ +L TMY++CG + A +LF +M+ LI WNAM+SG+A
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
E +F +M+++ P+ ++I S + CA++ +L+ + + Y+ R +++ + + +
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV-GRSDYRDDVFISSA 363
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
L+DM+A+ G V A+ VFD RD V ++AMI GYG+ G + A++++ M + + P+
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 483 HVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEII 542
V + +L AC+HSG+V +G F M D + I P+ +HYAC+ DL GRAG L++A E+I
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 543 TRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWS 602
MP +P +W L+ AC+ H + LGE+AA +L + P ++G+Y+ ++N+YAAA W
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542
Query: 603 ELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAG 662
+AEVR M+ G+ K GC+WV+V G F VGD S+P EI ++ + +K+ G
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Query: 663 YI 664
++
Sbjct: 603 FV 604
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 206/499 (41%), Gaps = 75/499 (15%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEP-- 110
C ++ L G+ +HAQV LGFD + + L++ YA+ A V E E
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
+ W ++S + +N +EAL + +M + V PD SVL A L D G +H +
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ + + +L +MYAK G++ A+ LFD M + + WN +IS YA G EA
Sbjct: 248 VVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREA 307
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
+F M + + D +++ ++AC
Sbjct: 308 IDMFHEM----------------------------------INKDVRPDTISITSAISAC 333
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ +G+L+ + ++ + R+ + + +ALI M+++CG + A ++F R ++ ++ W+
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
AM+ G+ R E L+R M G PN VT +L C ++ G F
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF------ 447
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
R+ D + Y +I G G A +
Sbjct: 448 --------------------------NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV 481
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP-RIEHYACMADLF 529
+ M ++P A+L+AC V G+ Q++ + I P HY +++L+
Sbjct: 482 IKCM---PVQPGVTVWGALLSACKKHRHVELGEYAAQQL---FSIDPSNTGHYVQLSNLY 535
Query: 530 GRAGLLNKAKEIITRMPYK 548
A L ++ E+ RM K
Sbjct: 536 AAARLWDRVAEVRVRMKEK 554
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/615 (33%), Positives = 337/615 (54%), Gaps = 48/615 (7%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
GKQ+HA + G + N+ ++ LV+ Y + + ++ S + + WN ++S +
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AIEVGSMGWSLF 181
NE +EAL R+M+ + V PDEFT SVL AC L +G E+H A++ GS+ + F
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 182 VHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEG 241
V +ALV MY ++ R +FD M +R WN +I+ Y+ EA LF M+E
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES- 398
Query: 242 VEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKE 301
AG ++ G + AC GA +
Sbjct: 399 -----------AGLLANSTTMAGVVP---------------------ACVRSGAFSRKEA 426
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
IHG V+ G D V+N L+ MYSR G + A +F +ME++ L+TWN M++G+ +
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486
Query: 362 VDEVSFLFRQM------LHEGA-----EPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
++ L +M + +GA +PN +T+ ++LP CA ++ L GKE H Y +K
Sbjct: 487 HEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN 546
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
+ + + + LVDMYA+ G + +++VFD + +++ +T+ +I YGM G GQ A+++
Sbjct: 547 NLATD-VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDL 605
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
M +KP+ V ++V ACSHSG+V +G +F M DYG+ P +HYAC+ DL G
Sbjct: 606 LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLG 665
Query: 531 RAGLLNKAKEIITRMPYKPTPA-MWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
RAG + +A +++ MP A W++L+GA RIH N +GE AA L++++P+ + +Y+
Sbjct: 666 RAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYV 725
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYP 649
L+AN+Y++AG W + EVR M+ GV+K PGC+W++ G E F GD+S+P + ++
Sbjct: 726 LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSG 785
Query: 650 LMDGLNELMKDAGYI 664
++ L E M+ GY+
Sbjct: 786 YLETLWERMRKEGYV 800
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 242/529 (45%), Gaps = 57/529 (10%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPR-LVSFYARFNLFDDACIVTESSSSLEPLHWN 114
++ + GKQ+HA V G+ +++ + LV+ Y + F V + S + WN
Sbjct: 109 DLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 168
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELL---DCASGVEVHK-A 170
LIS E + AL A+R ML + V P FT SV+ AC L G +VH
Sbjct: 169 SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYG 228
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ G + + F+ N LV+MY K GKL ++ L + RD V+WNT++S EA
Sbjct: 229 LRKGEL--NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
+ M EGVE D + L AC
Sbjct: 287 LEYLREMVLEGVEP----------------------------------DEFTISSVLPAC 312
Query: 291 SHIGALKLGKEIHGHAVRTG-FDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
SH+ L+ GKE+H +A++ G D V +AL+ MY C + +F M ++ + W
Sbjct: 313 SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHE-GAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
NAM++G++ + E LF M G N T+A V+P C R + H +++
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
KR ++ + NTL+DMY+R GK+ A R+F + RD VT+ MI GY + AL
Sbjct: 433 KRGLDRDR-FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 469 NIFEEM-----------CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
+ +M + +KP+ + ++ +L +C+ +A+G+ + + + +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLAT 550
Query: 518 RIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN 566
+ + + D++ + G L ++++ ++P K W +I A +HGN
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV-ITWNVIIMAYGMHGN 598
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 212/459 (46%), Gaps = 42/459 (9%)
Query: 105 SSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASG 164
S S P W L+ VR+ L EA+ Y M+ + PD + +P++LKA +L D G
Sbjct: 57 SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116
Query: 165 VEVHKAI-EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYAS 223
++H + + G S+ V N LV++Y K G +FD + ER+ VSWN++IS S
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 224 RGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAM 283
W A + F M +E VE + +
Sbjct: 177 FEKWEMALEAFRCMLDENVEPS----------------------------------SFTL 202
Query: 284 VVGLNACSHIG---ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQR 340
V + ACS++ L +GK++H + +R G ++ + N L+ MY + G L + +L
Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGS 261
Query: 341 MEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHG 400
+ L+TWN +LS +++ E R+M+ EG EP+ TI+SVLP C+ + L+ G
Sbjct: 262 FGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Query: 401 KEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGM 460
KE H Y +K E + + LVDMY +VL +RVFD + R + AMI GY
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 381
Query: 461 KGEGQMALNIFEEMCKFK-IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI 519
+ AL +F M + + + M V+ AC SG ++ + + +V R
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 520 EHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
M D++ R G ++ A I +M + W T+I
Sbjct: 442 VQNTLM-DMYSRLGKIDIAMRIFGKMEDRDL-VTWNTMI 478
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 214/497 (43%), Gaps = 64/497 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLG-FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL 111
C ++ L GK+LHA + G D+N+ + LV Y V + +
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQ-VIPDEFTYPSVLKACGELLDCASGVEVHKA 170
WN +I+ + +NE EAL + M ++ + T V+ AC + +H
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ + FV N L+ MY++ GK+++A +F M +RD V+WNT+I+ Y +A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
L +MQ L KGA R S+ + + ++ L +C
Sbjct: 491 LLLLHKMQN-----------------LERKVSKGA------SRVSLKPNSITLMTILPSC 527
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ + AL GKEIH +A++ V +AL+ MY++CG L + +F ++ +K +ITWN
Sbjct: 528 AALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWN 587
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
++ + E L R M+ +G +PN VT SV C+ + G Y+MK
Sbjct: 588 VIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKP 646
Query: 411 EQFKEYLLL-WNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
+ E + +VD+ R+G++ EA ++ + M R + G
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-----------MMPRDFNKAG------- 688
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI-EHYACMADL 528
A ++L A + G++ Q ++ + P + HY +A++
Sbjct: 689 ---------------AWSSLLGASRIHNNLEIGEIAAQNLIQ---LEPNVASHYVLLANI 730
Query: 529 FGRAGLLNKAKEIITRM 545
+ AGL +KA E+ M
Sbjct: 731 YSSAGLWDKATEVRRNM 747
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 358 bits (919), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 203/612 (33%), Positives = 322/612 (52%), Gaps = 37/612 (6%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + L GK++H ++ GF + + L + YA+ ++A V + + + W
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +++ + +N + AL + M + + P T SVL A L + G E+H
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ + ALV MYAK G LE AR LFD M
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGM--------------------------- 297
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSH 292
+E N++ WN+M Y+ N K A+ + +M + V+++ L+AC+
Sbjct: 298 --------LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+G L+ G+ IH +V G D +V N+LI+MY +C ++ A +F +++ + L++WNAM
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
+ GFA R + F QM +P+ T SV+ A ++ H K H +M R
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM-RSC 468
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
+ + + LVDMYA+ G ++ A+ +FD ++ R T+ AMI GYG G G+ AL +FE
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 528
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
EM K IKP+ V ++V++ACSHSGLV G F M ++Y I ++HY M DL GRA
Sbjct: 529 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 588
Query: 533 GLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIA 592
G LN+A + I +MP KP ++ ++GAC+IH N E AA +L E+ PD GY++L+A
Sbjct: 589 GRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 648
Query: 593 NMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMD 652
N+Y AA W ++ +VR M G++K PGC+ V++ E FF G T++P + +IY ++
Sbjct: 649 NIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLE 708
Query: 653 GLNELMKDAGYI 664
L +K+AGY+
Sbjct: 709 KLICHIKEAGYV 720
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 233/513 (45%), Gaps = 47/513 (9%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLI 117
+SL +Q+ V G Q +LVS + R+ D+A V E S + ++ ++
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 118 SMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMG 177
F + +AL + +M V P + + +LK CG+ + G E+H +
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 178 WSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERM 237
LF L +MYAK ++ AR K+F+RM
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEAR-------------------------------KVFDRM 196
Query: 238 QEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGAL 296
E +++ WNT+ GY G + AL+++ M ++ + +V L A S + +
Sbjct: 197 PER----DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 297 KLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF 356
+GKEIHG+A+R+GFD L N+ AL+ MY++CG L A LF M E+ +++WN+M+ +
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
+ E +F++ML EG +P V++ L CA + +L+ G+ H +
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH-KLSVELGLDRN 371
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK 476
+ + N+L+ MY + +V A +F L R V++ AMI G+ G ALN F +M
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 477 FKIKPDHVAMVAVLTACSHSGLVAQGQ----VLFQEMVDDYGIIPRIEHYACMADLFGRA 532
+KPD V+V+TA + + + V+ + +D + + D++ +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT-----TALVDMYAKC 486
Query: 533 GLLNKAKEIITRMPYKPTPAMWATLIGACRIHG 565
G + A+ I M + W +I HG
Sbjct: 487 GAIMIARLIFDMMSERHVTT-WNAMIDGYGTHG 518
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 358 bits (919), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 214/677 (31%), Positives = 345/677 (50%), Gaps = 75/677 (11%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFN-------LFDD---------ACIV 101
SL + +H +I+ GF +L RL+ Y + + LFD+ +V
Sbjct: 28 TSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMV 87
Query: 102 TESSSS-----------------LEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPD 144
+ +S + + +N +I+ F N A++ + KM + PD
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 145 EFTYPSVLKACGELLDCASG-VEVHKAIEVGSMGWSLFVHNALVSMYAKFGK----LEVA 199
FT+ SVL + D V+ H A G+ V NALVS+Y+K L A
Sbjct: 148 NFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSA 207
Query: 200 RHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHA 259
R +FD + E+D+ SW T+++ Y G + +L E M + M ++ +N M GY++
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN---MKLVAYNAMISGYVNR 264
Query: 260 GNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR 318
G ++ AL+++ +M +S I LD + AC+ G L+LGK++H + +R D +
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFD 323
Query: 319 NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLH---- 374
N+L+++Y +CG A +F++M K L++WNA+LSG+ + E +F++M
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 375 ---------------------------EGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
EG EP + + CA + +G+++H +
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
+K F L N L+ MYA+ G V EA++VF ++ D V++ A+I G G G A
Sbjct: 444 LKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMAD 527
++++EEM K I+PD + ++ VLTACSH+GLV QG+ F M Y I P +HYA + D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 528 LFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGY 587
L R+G + A+ +I +P+KPT +W L+ CR+HGN LG AA KL + P+H G
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 588 YILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEI 647
Y+L++NM+AA G W E+A VR MR+ GVKK C+W+++ + F V DTS+P A +
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAV 682
Query: 648 YPLMDGLNELMKDAGYI 664
Y + L + M+ GY+
Sbjct: 683 YIYLQDLGKEMRRLGYV 699
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 38/230 (16%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + + G+Q HAQ++ +GFD + L++ YA+ + ++A V + L+ + W
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC------------------ 155
N LI+ ++ EA+ Y +ML+K + PD T +VL AC
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 156 -----------GELLD--CASG--VEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEV-- 198
L+D C SG + IE + + AL+S G +E+
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 199 --ARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
A LF +PE D ++ + + +A+ G W E ++ + M++ GV+ +
Sbjct: 607 IAADKLFGLIPEHDG-TYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEV 655
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 219/652 (33%), Positives = 343/652 (52%), Gaps = 53/652 (8%)
Query: 55 INVNSLSPGKQLHAQVI------SLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL 108
+NV S G LHA+ + F NT++ S Y++ D C +
Sbjct: 56 MNVYS-KTGYALHARKLFDEMPLRTAFSWNTVL-----SAYSKRGDMDSTCEFFDQLPQR 109
Query: 109 EPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH 168
+ + W +I + + +A+ M+++ + P +FT +VL + +G +VH
Sbjct: 110 DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVH 169
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
I + ++ V N+L++MYAK G +A+ +FD M RD SWN +I+ + G
Sbjct: 170 SFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMD 229
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSI-HLDHVAMVVG 286
A FE+M E +I+ WN+M G+ G AL + S+M R S+ D +
Sbjct: 230 LAMAQFEQMAER----DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCG----------------- 329
L+AC+++ L +GK+IH H V TGFD+ V NALI+MYSRCG
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 330 ----------------DLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQML 373
D+ A +F ++++ ++ W AM+ G+ E LFR M+
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 374 HEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKV 433
G PN T+A++L + + +A+L HGK+ H +K + + + N L+ MYA++G +
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGNI 464
Query: 434 LEAKRVFDSL-TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
A R FD + RD V++T+MI G + AL +FE M ++PDH+ V V +A
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 493 CSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPA 552
C+H+GLV QG+ F M D IIP + HYACM DLFGRAGLL +A+E I +MP +P
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 553 MWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMR 612
W +L+ ACR+H N LG+ AA +LL ++P++SG Y +AN+Y+A G W E A++R M+
Sbjct: 585 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 613 NLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
+ VKK G +W++V + F V D ++P EIY M + + +K GY+
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYV 696
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 224/521 (42%), Gaps = 82/521 (15%)
Query: 143 PDEFTYPSVLKACGELLDCA--------SGVEVHKAIEVGSMGWSLFVHNALVSMYAKFG 194
P + ++L+ C LL + + VH + + +S+++ N L+++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 195 KLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAG 254
AR LFD MP R SWNT++S Y+ RG + F+++ + + + W TM
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIV 119
Query: 255 GYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDV 313
GY + G + A++++ M + I + L + + ++ GK++H V+ G
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRG 179
Query: 314 LDNVRNALITMYSRCGDLGHAYMLFQR-------------------------------ME 342
+V N+L+ MY++CGD A +F R M
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 343 EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGK 401
E+ ++TWN+M+SGF +F +ML + P+ T+ASVL CA + L GK
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 402 EFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKR----------------------- 438
+ H +I+ F ++ N L+ MY+R G V A+R
Sbjct: 300 QIHSHIVT-TGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358
Query: 439 ----------VFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVA 488
+F SL RD V +TAMI GY G A+N+F M +P+ + A
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418
Query: 489 VLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYK 548
+L+ S ++ G+ + V G I + + ++ +AG + A + +
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 549 PTPAMWATLIGACRIHGNTVLG-EWAAGKLLE-MKPDHSGY 587
W ++I A HG+ E L+E ++PDH Y
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITY 518
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 146/348 (41%), Gaps = 88/348 (25%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTE--------- 103
C N+ L GKQ+H+ +++ GFD + I+L L+S Y+R + A + E
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 104 ------------------------SSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRK 139
S + + W +I + ++ + EA++ +R M+
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 140 QVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGSMGWSLFVHNALVSMYAKFGKLEV 198
P+ +T ++L L + G ++H A++ G + +S+ V NAL++MYAK G +
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI-YSVSVSNALITMYAKAGNITS 466
Query: 199 ARHLFDNMP-ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYL 257
A FD + ERD VSW ++I A G EA +LFE M EG
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG---------------- 510
Query: 258 HAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNV 317
+ DH+ V +AC+H G + G++ FD++ +V
Sbjct: 511 ------------------LRPDHITYVGVFSACTHAGLVNQGRQY--------FDMMKDV 544
Query: 318 RN---------ALITMYSRCGDLGHAYMLFQRME-EKGLITWNAMLSG 355
++ ++ R G L A ++M E ++TW ++LS
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/556 (35%), Positives = 310/556 (55%), Gaps = 28/556 (5%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN ++S + +N +A S + +M K ++ ++ ++L A + + K+ E
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
W+L N L+ + K K+ AR FD+M RD VSWNTII+ YA G EA +
Sbjct: 216 ----NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 271
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
LF+ E ++ W M GY+ + A +L +M + AM+ G
Sbjct: 272 LFD----ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGER 327
Query: 293 IGALKLGKEIHGHAVRTGFDVLD--NVR--NALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
+++ KE+ FDV+ NV N +IT Y++CG + A LF +M ++ ++
Sbjct: 328 ---MEMAKEL--------FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
W AM++G++ E LF QM EG N + +S L CA + L+ GK+ H ++
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
K ++ + N L+ MY + G + EA +F + +D V++ MI GY G G++AL
Sbjct: 437 K-GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
FE M + +KPD MVAVL+ACSH+GLV +G+ F M DYG++P +HYACM DL
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 555
Query: 529 FGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYY 588
GRAGLL A ++ MP++P A+W TL+GA R+HGNT L E AA K+ M+P++SG Y
Sbjct: 556 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 615
Query: 589 ILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIY 648
+L++N+YA++G W ++ ++R MR+ GVKK PG +W+++ + F VGD +P EI+
Sbjct: 616 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 675
Query: 649 PLMDGLNELMKDAGYI 664
++ L+ MK AGY+
Sbjct: 676 AFLEELDLRMKKAGYV 691
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 220/451 (48%), Gaps = 51/451 (11%)
Query: 76 DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEA------ 129
++N + L+S Y + + ++AC++ +S + + WN L+ FV+ + VEA
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 130 ---------------------LSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEV- 167
+ R++ + + D FT+ +++ + E+
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 168 HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW 227
K E + W NA+++ Y + ++E+A+ LFD MP R+ +WNT+I+ YA G
Sbjct: 305 DKMPERNEVSW-----NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKI 359
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVG 286
EA LF++M + + + W M GY +G+ AL+L QM R L+ +
Sbjct: 360 SEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
L+ C+ + AL+LGK++HG V+ G++ V NAL+ MY +CG + A LF+ M K +
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
++WN M++G++ + F M EG +P+ T+ +VL C+ + G+++ Y
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF-Y 534
Query: 407 IMKREQFKEYLLLWNT-----LVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGM 460
M ++Y ++ N+ +VD+ R+G + +A + ++ D + ++ +
Sbjct: 535 TMT----QDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV 590
Query: 461 KGEGQMALNIFEEMCKFKIKPDHVAMVAVLT 491
G ++A +++ F ++P++ M +L+
Sbjct: 591 HGNTELAETAADKI--FAMEPENSGMYVLLS 619
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 207/500 (41%), Gaps = 80/500 (16%)
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN+ IS ++R EAL +++M R
Sbjct: 66 EWNVAISSYMRTGRCNEALRVFKRMPR--------------------------------- 92
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
WS +N ++S Y + G+ E+AR LFD MPERD VSWN +I Y G+A
Sbjct: 93 ------WSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAR 146
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
+LFE M E ++ WNTM GY G A + +M + A++ S
Sbjct: 147 ELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNS 202
Query: 292 HI-----------------------GALKLGKEIHGHAVRTGFDVLDNVR-NALITMYSR 327
+ G +K K + +V D V N +IT Y++
Sbjct: 203 KMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQ 262
Query: 328 CGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASV 387
G + A LF + + TW AM+SG+ V+E LF +M E N V+ ++
Sbjct: 263 SGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAM 318
Query: 388 LPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD 447
L + ++ KE + R + WNT++ YA+ GK+ EAK +FD + +RD
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCRN-----VSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Query: 448 EVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQ 507
V++ AMI GY G AL +F +M + + + + + L+ C+ + G+ L
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 508 EMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIH--G 565
+V G + ++ + G + +A ++ M K + W T+I H G
Sbjct: 434 RLVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS-WNTMIAGYSRHGFG 491
Query: 566 NTVLGEWAAGKLLEMKPDHS 585
L + + K +KPD +
Sbjct: 492 EVALRFFESMKREGLKPDDA 511
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 174/365 (47%), Gaps = 40/365 (10%)
Query: 208 ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALK 267
+ D WN IS Y G EA ++F+RM + + +N M GYL G F+ A K
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARK 116
Query: 268 LLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSR 327
L +M + M+ G ++ LGK + DV N +++ Y++
Sbjct: 117 LFDEMPERDLVSWNVMIKG-----YVRNRNLGKARELFEIMPERDVCS--WNTMLSGYAQ 169
Query: 328 CGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIA-- 385
G + A +F RM EK ++WNA+LS + +++E LF+ + N+ ++
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK------SRENWALVSWN 223
Query: 386 SVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTR 445
+L + + ++F + R+ ++ WNT++ YA+SGK+ EA+++FD
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRD-----VVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 446 RDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVL 505
+D T+TAM+ GY + A +F++M + + V+ A+L +G V QG+ +
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAML-----AGYV-QGERM 328
Query: 506 FQEMVDD-YGIIP--RIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACR 562
EM + + ++P + + M + + G +++AK + +MP K P WA +I
Sbjct: 329 --EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYS 385
Query: 563 IHGNT 567
G++
Sbjct: 386 QSGHS 390
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 47/275 (17%)
Query: 7 ASLKNFVYHGHLSNAFKSFLHIQHHAAA-SSPGFSHXXXXXXXXXXXGCINVNSLSPGKQ 65
A + + GH A + F+ ++ + FS C +V +L GKQ
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST--------CADVVALELGKQ 430
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNEL 125
LH +++ G++ + L+ Y + ++A + + + + + WN +I+ + R+
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 490
Query: 126 FVEALSAYRKMLRKQVIPDEFTYPSVLKACGE--LLDCASGVEVHKAIEVGSMGWSLFVH 183
AL + M R+ + PD+ T +VL AC L+D + G M S +
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQH-Y 549
Query: 184 NALVSMYAKFGKLEVARHLFDNMP-ERDDVSWNTII------------------------ 218
+V + + G LE A +L NMP E D W T++
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609
Query: 219 ----------SCYASRGTWGEAFKLFERMQEEGVE 243
+ YAS G WG+ KL RM+++GV+
Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 644
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 352 bits (903), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 202/603 (33%), Positives = 330/603 (54%), Gaps = 47/603 (7%)
Query: 54 CINVNSLSPGKQLHAQVISLGF-DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C G+Q+H ++ GF D + LV+ YA+ L A +V S +
Sbjct: 70 CAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVF-GGSERDVFG 128
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AI 171
+N LIS FV N ++A+ YR+M ++PD++T+PS+LK + ++ + +VH A
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAF 187
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDD-VSWNTIISCYASRGTWGEA 230
++G +V + LV+ Y+KF +E A+ +FD +P+RDD V WN +++ Y+ + +A
Sbjct: 188 KLG-FDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDA 246
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
+F +M+EEGV ++ TS+ L+A
Sbjct: 247 LLVFSKMREEGVGVS------------------------RHTITSV----------LSAF 272
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ G + G+ IHG AV+TG V NALI MY + L A +F+ M+E+ L TWN
Sbjct: 273 TVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWN 332
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY---- 406
++L + D LF +ML G P+ VT+ +VLP C R+A+L+ G+E H Y
Sbjct: 333 SVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVS 392
Query: 407 -IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQ 465
++ R+ E+ + N+L+DMY + G + +A+ VFDS+ +D ++ MI GYG++ G+
Sbjct: 393 GLLNRKSSNEF--IHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGE 450
Query: 466 MALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACM 525
+AL++F MC+ +KPD + V +L ACSHSG + +G+ +M Y I+P +HYAC+
Sbjct: 451 LALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACV 510
Query: 526 ADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHS 585
D+ GRA L +A E+ P P +W +++ +CR+HGN L A +L E++P+H
Sbjct: 511 IDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHC 570
Query: 586 GYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAG 645
G Y+L++N+Y AG + E+ +VR MR VKK PGC+W+ + FF G+ ++P
Sbjct: 571 GGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFK 630
Query: 646 EIY 648
I+
Sbjct: 631 SIH 633
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 6/271 (2%)
Query: 277 HLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGF-DVLDNVRNALITMYSRCGDLGHAY 335
H + + L C+ G++IHG VR GF D +L+ MY++CG + A
Sbjct: 57 HHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAV 116
Query: 336 MLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIA 395
++F E+ + +NA++SGF + +R+M G P+ T S+L +
Sbjct: 117 LVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLK-GSDAM 174
Query: 396 NLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDE-VTYTAM 454
L K+ H K F + + LV Y++ V +A++VFD L RD+ V + A+
Sbjct: 175 ELSDVKKVHGLAFKL-GFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNAL 233
Query: 455 IRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYG 514
+ GY + AL +F +M + + + +VL+A + SG + G+ + V G
Sbjct: 234 VNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV-KTG 292
Query: 515 IIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
I + D++G++ L +A I M
Sbjct: 293 SGSDIVVSNALIDMYGKSKWLEEANSIFEAM 323
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 349 bits (895), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 195/636 (30%), Positives = 321/636 (50%), Gaps = 81/636 (12%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLIS 118
SL G+Q+ ++ +N +V+ + D+A + S + WN ++S
Sbjct: 70 SLEDGRQVFDKMPQ----RNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVS 125
Query: 119 MFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGW 178
F +++ EAL + M ++ + +E+++ SVL AC L D GV+VH I
Sbjct: 126 GFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS 185
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQ 238
+++ +ALV MY+K G + A+ +FD M +R
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDR----------------------------- 216
Query: 239 EEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALK 297
N++ WN++ + G AL + M S + D V + ++AC+ + A+K
Sbjct: 217 ------NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270
Query: 298 LGKEIHGHAVRTGFDVLDN---VRNALITMYSRCGDLGHAY------------------- 335
+G+E+HG V+ D L N + NA + MY++C + A
Sbjct: 271 VGQEVHGRVVKN--DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 336 ------------MLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVT 383
++F +M E+ +++WNA+++G+ +E LF + E P + +
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388
Query: 384 IASVLPLCARIANLQHGKEFHCYIMK-----REQFKEYLLLWNTLVDMYARSGKVLEAKR 438
A++L CA +A L G + H +++K + ++ + + N+L+DMY + G V E
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 439 VFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGL 498
VF + RD V++ AMI G+ G G AL +F EM + KPDH+ M+ VL+AC H+G
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508
Query: 499 VAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
V +G+ F M D+G+ P +HY CM DL GRAG L +AK +I MP +P +W +L+
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Query: 559 GACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKK 618
AC++H N LG++ A KLLE++P +SG Y+L++NMYA G W ++ VR MR GV K
Sbjct: 569 AACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 628
Query: 619 APGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGL 654
PGC+W+ + G F V D S+P +I+ L+D L
Sbjct: 629 QPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 210/412 (50%), Gaps = 13/412 (3%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C +N ++ G Q+H+ + F + + LV Y++ +DA V + +
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAI 171
WN LI+ F +N VEAL ++ ML +V PDE T SV+ AC L G EVH + +
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ + + + NA V MYAK +++ AR +FD+MP R+ ++ ++IS YA + A
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNAC 290
+F +M E N++ WN + GY G + AL L + R S+ H + L AC
Sbjct: 341 LMFTKMAER----NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDN------VRNALITMYSRCGDLGHAYMLFQRMEEK 344
+ + L LG + H H ++ GF V N+LI MY +CG + Y++F++M E+
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 345 GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH 404
++WNAM+ GFA +E LFR+ML G +P+++T+ VL C ++ G+ +
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 405 CYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR-DEVTYTAMI 455
+ + + +VD+ R+G + EAK + + + + D V + +++
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 235/499 (47%), Gaps = 64/499 (12%)
Query: 167 VHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGT 226
VH ++ +F+ N L+ Y+K G LE R +FD MP+R+ +WN++++ G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 227 WGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVV 285
EA LF M E + WN+M G+ + AL + M + L+ +
Sbjct: 102 LDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 286 GLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG 345
L+ACS + + G ++H ++ F + +AL+ MYS+CG++ A +F M ++
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 346 LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHC 405
+++WN++++ F E +F+ ML EP+ VT+ASV+ CA ++ ++ G+E H
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 406 YIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGM----- 460
++K ++ + ++L N VDMYA+ ++ EA+ +FDS+ R+ + T+MI GY M
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 461 --------------------------KGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
GE + AL++F + + + P H + +L AC+
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 495 -----HSGLVAQGQVL-----FQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
H G+ A VL FQ +D + + D++ + G + + + +
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGN-----SLIDMYVKCGCVEEGYLVFRK 452
Query: 545 MPYKPTPAMWATLIG-ACRIHGNTVLGEWAAGKLLEM--KPDHSGYYILIANMYAAAGCW 601
M + + A +IG A +GN L + ++LE KPDH I + + +A G
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFR--EMLESGEKPDH----ITMIGVLSACGHA 506
Query: 602 SELAEVRTYM----RNLGV 616
+ E R Y R+ GV
Sbjct: 507 GFVEEGRHYFSSMTRDFGV 525
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 155/330 (46%), Gaps = 37/330 (11%)
Query: 263 KGALKLLSQMRTSIHLDHVAMVVGLNAC--SHIGALKLGKEIHGHAVRTGFDVLDNVRNA 320
K LKL + + S D L++C S + A+ + + +H +++GF ++N
Sbjct: 4 KSFLKLAADL--SSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNR 60
Query: 321 LITMYSRCGD-------------------------------LGHAYMLFQRMEEKGLITW 349
LI YS+CG L A LF+ M E+ TW
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
N+M+SGFA DR +E F M EG N + ASVL C+ + ++ G + H I K
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
F + + + LVDMY++ G V +A+RVFD + R+ V++ ++I + G AL+
Sbjct: 181 -SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
+F+ M + +++PD V + +V++AC+ + GQ + +V + + I D++
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIG 559
+ + +A+ I MP + A + + G
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISG 329
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 348 bits (894), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 206/680 (30%), Positives = 331/680 (48%), Gaps = 73/680 (10%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + SL GK++ + GF ++ + +L Y +A V + + L W
Sbjct: 104 CADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFW 163
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N+L++ ++ F ++ ++KM+ V D +T+ V K+ L G ++H I
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
G V N+LV+ Y K +++ AR +FD M ERD +SWN+II+ Y S G + +
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 234 FERMQEEGVEMNII-----------------------------------IWNTMAGGYLH 258
F +M G+E+++ NT+ Y
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 259 AGNFKGALKLLSQMRTSIHLDHVAMVVG-------------------------------- 286
G+ A + +M + + +M+ G
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 287 LNACSHIGALKLGKEIHGHAVRT--GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK 344
LN C+ L GK +H GFD+ V NAL+ MY++CG + A ++F M K
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIF--VSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 345 GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGA-EPNYVTIASVLPLCARIANLQHGKEF 403
+I+WN ++ G++ +E LF +L E P+ T+A VLP CA ++ G+E
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGE 463
H YIM+ F + + N+LVDMYA+ G +L A +FD + +D V++T MI GYGM G
Sbjct: 522 HGYIMRNGYFSDRHVA-NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 580
Query: 464 GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA 523
G+ A+ +F +M + I+ D ++ V++L ACSHSGLV +G F M + I P +EHYA
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 524 CMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPD 583
C+ D+ R G L KA I MP P +W L+ CRIH + L E A K+ E++P+
Sbjct: 641 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 700
Query: 584 HSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPH 643
++GYY+L+AN+YA A W ++ +R + G++K PGC+W+++ G + F GD+SNP
Sbjct: 701 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760
Query: 644 AGEIYPLMDGLNELMKDAGY 663
I + + M + GY
Sbjct: 761 TENIEAFLRKVRARMIEEGY 780
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 206/435 (47%), Gaps = 38/435 (8%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC + +S G+ +H+ + F + L+ Y++ D A V S +
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS 364
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+ +I+ + R L EA+ + +M + + PD +T +VL C G VH+ I+
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+G+ +FV NAL+ MYAK G ++ A +F M +D +SWNTII Y+ EA
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 484
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
LF LL + R S VA V L AC+
Sbjct: 485 LFNL-------------------------------LLEEKRFSPDERTVACV--LPACAS 511
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+ A G+EIHG+ +R G+ +V N+L+ MY++CG L A+MLF + K L++W M
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE- 411
++G+ E LF QM G E + ++ S+L C+ + G F IM+ E
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF-NIMRHEC 630
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-TRRDEVTYTAMIRGYGMKGEGQMALNI 470
+ + + + +VDM AR+G +++A R +++ D + A++ G + + ++A +
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 471 FEEMCKFKIKPDHVA 485
E++ F+++P++
Sbjct: 691 AEKV--FELEPENTG 703
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 153/314 (48%), Gaps = 5/314 (1%)
Query: 250 NTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRT 309
NT + +GN + A+KLL + +D + L C+ +LK GKE+
Sbjct: 65 NTQLRRFCESGNLENAVKLLC-VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGN 123
Query: 310 GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLF 369
GF + N+ + L MY+ CGDL A +F ++ + + WN +++ A LF
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 370 RQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYAR 429
++M+ G E + T + V + + ++ G++ H +I+K F E + N+LV Y +
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK-SGFGERNSVGNSLVAFYLK 242
Query: 430 SGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAV 489
+ +V A++VFD +T RD +++ ++I GY G + L++F +M I+ D +V+V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 490 LTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA-CMADLFGRAGLLNKAKEIITRMPYK 548
C+ S L++ G+ + V R + + + D++ + G L+ AK + M +
Sbjct: 303 FAGCADSRLISLGRAVHSIGVK--ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 549 PTPAMWATLIGACR 562
+ + + G R
Sbjct: 361 SVVSYTSMIAGYAR 374
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/604 (31%), Positives = 327/604 (54%), Gaps = 38/604 (6%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G QLH V+ G D + L+S Y++ FDDA + S + + WN +IS +V+
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
+ L E+L+ + +M+ V+PD T+ S+L + + + ++H I S+ +F+
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
+AL+ Y K + +A+++F D
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVD-------------------------------- 405
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKE 301
++++ M GYLH G + +L++ + + I + + +V L + ALKLG+E
Sbjct: 406 ---VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE 462
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
+HG ++ GFD N+ A+I MY++CG + AY +F+R+ ++ +++WN+M++ A D
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
+FRQM G + V+I++ L CA + + GK H +++K + + +
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD-VYSES 581
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC-KFKIK 480
TL+DMYA+ G + A VF ++ ++ V++ ++I G G+ + +L +F EM K I+
Sbjct: 582 TLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR 641
Query: 481 PDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKE 540
PD + + ++++C H G V +G F+ M +DYGI P+ EHYAC+ DLFGRAG L +A E
Sbjct: 642 PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYE 701
Query: 541 IITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGC 600
+ MP+ P +W TL+GACR+H N L E A+ KL+++ P +SGYY+LI+N +A A
Sbjct: 702 TVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANARE 761
Query: 601 WSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKD 660
W + +VR+ M+ V+K PG +W+++ F GD ++P + IY L++ L ++
Sbjct: 762 WESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRL 821
Query: 661 AGYI 664
GYI
Sbjct: 822 EGYI 825
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 244/518 (47%), Gaps = 43/518 (8%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACI----VTESSSSL 108
C N N L GKQ+HA +I ++ R++ YA F D + SS+
Sbjct: 44 ACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSI 103
Query: 109 EPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH 168
P WN +IS FVRN L +AL+ Y KML V PD T+P ++KAC L + +
Sbjct: 104 RP--WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+ M + FV ++L+ Y ++GK++V LFD + ++D V WN +++ YA G
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN 288
K F M+ + + N + ++ + L+
Sbjct: 222 SVIKGFSVMRMDQISPNAVTFDCV----------------------------------LS 247
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
C+ + LG ++HG V +G D +++N+L++MYS+CG A LF+ M +T
Sbjct: 248 VCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVT 307
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
WN M+SG+ ++E F +M+ G P+ +T +S+LP ++ NL++ K+ HCYIM
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
R + L + L+D Y + V A+ +F D V +TAMI GY G +L
Sbjct: 368 -RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSL 426
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
+F + K KI P+ + +V++L + G+ L ++ G R + D+
Sbjct: 427 EMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDM 485
Query: 529 FGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN 566
+ + G +N A EI R+ + + W ++I C N
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVS-WNSMITRCAQSDN 522
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLIS 118
+L G++LH +I GFD + ++ YA+ + A + E S + + WN +I+
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT 515
Query: 119 MFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGW 178
+++ A+ +R+M + D + + L AC L + G +H + S+
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS 575
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQ 238
++ + L+ MYAK G L+ A ++F M E++ VSWN+II+ + G ++ LF M
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 239 EE-GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL----DHVAMVVGL 287
E+ G+ + I + + H G+ ++ M + +H A VV L
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 5/275 (1%)
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME--EK 344
L ACS+ L+ GK++H + ++ MY+ CG +F R++
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 345 GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH 404
+ WN+++S F +++ + +ML G P+ T ++ C + N + G +F
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFL 160
Query: 405 CYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEG 464
+ + ++L+ Y GK+ ++FD + ++D V + M+ GY G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 465 QMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYAC 524
+ F M +I P+ V VL+ C+ L+ G V +V G+
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG-VQLHGLVVVSGVDFEGSIKNS 279
Query: 525 MADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIG 559
+ ++ + G + A ++ RM + W +I
Sbjct: 280 LLSMYSKCGRFDDASKLF-RMMSRADTVTWNCMIS 313
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 193/598 (32%), Positives = 320/598 (53%), Gaps = 18/598 (3%)
Query: 75 FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL------HWNMLISMFVRNELFVE 128
FD+ I P L S+ + A +++E S+ E L WN+LI + + L
Sbjct: 64 FDR--IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGA 121
Query: 129 ALSAYRKMLRK-QVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGSMGWSLFVHNAL 186
A+ AY M+R T ++LK + G ++H + I++G + L V + L
Sbjct: 122 AVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESY-LLVGSPL 180
Query: 187 VSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
+ MYA G + A+ +F + +R+ V +N+++ + G +A +LF M+++ V
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS--- 237
Query: 247 IIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEIHGH 305
W M G G K A++ +M+ + +D L AC +GA+ GK+IH
Sbjct: 238 --WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHAC 295
Query: 306 AVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEV 365
+RT F V +ALI MY +C L +A +F RM++K +++W AM+ G+ R +E
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEA 355
Query: 366 SFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVD 425
+F M G +P++ T+ + CA +++L+ G +FH + Y+ + N+LV
Sbjct: 356 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAIT-SGLIHYVTVSNSLVT 414
Query: 426 MYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA 485
+Y + G + ++ R+F+ + RD V++TAM+ Y G + +F++M + +KPD V
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVT 474
Query: 486 MVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
+ V++ACS +GLV +GQ F+ M +YGI+P I HY+CM DLF R+G L +A I M
Sbjct: 475 LTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Query: 546 PYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELA 605
P+ P W TL+ ACR GN +G+WAA L+E+ P H Y L++++YA+ G W +A
Sbjct: 535 PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVA 594
Query: 606 EVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
++R MR VKK PG +W+ G+ F D S+P+ +IY ++ LN + D GY
Sbjct: 595 QLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGY 652
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 211/464 (45%), Gaps = 67/464 (14%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDD---------------------- 97
+S GKQ+H QVI LGF+ ++ L+ YA D
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 98 --ACIVTESSSSL------EPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYP 149
AC + E + L + + W +I +N L EA+ +R+M + + D++ +
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 150 SVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER 209
SVL ACG L G ++H I + ++V +AL+ MY K L A+ +FD M ++
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 210 DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLL 269
+ VSW ++ Y G EA K+F MQ G++
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP------------------------- 369
Query: 270 SQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCG 329
DH + ++AC+++ +L+ G + HG A+ +G V N+L+T+Y +CG
Sbjct: 370 ---------DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 330 DLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP 389
D+ + LF M + ++W AM+S +A R E LF +M+ G +P+ VT+ V+
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 390 LCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDE 448
C+R ++ G+ + + + ++ ++D+++RSG++ EA R + + D
Sbjct: 481 ACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDA 540
Query: 449 VTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
+ +T ++ + +G + + + ++ P H A +L++
Sbjct: 541 IGWTTLLS--ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSS 582
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 204/438 (46%), Gaps = 43/438 (9%)
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
F++N +V YA AR +FD +P+ + SWN ++ Y+ G E FE++ +
Sbjct: 42 FLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR 101
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT--SIHLDHVAMVVGLNACSHIGALKL 298
+ + WN + GY +G A+K + M S +L V ++ L S G + L
Sbjct: 102 ----DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 299 GKEIHGHAVRTGFDVLDNVRNALITMYSR------------------------------- 327
GK+IHG ++ GF+ V + L+ MY+
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 328 CGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASV 387
CG + A LF+ M EK ++W AM+ G A E FR+M +G + + SV
Sbjct: 218 CGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 388 LPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD 447
LP C + + GK+ H I+ R F++++ + + L+DMY + + AK VFD + +++
Sbjct: 277 LPACGGLGAINEGKQIHACII-RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 448 EVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQ 507
V++TAM+ GYG G + A+ IF +M + I PDH + ++AC++ + +G
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 508 EMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNT 567
+ + G+I + + L+G+ G ++ + + M + + W ++ A G
Sbjct: 396 KAITS-GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSAYAQFGRA 453
Query: 568 VLGEWAAGKLLE--MKPD 583
V K+++ +KPD
Sbjct: 454 VETIQLFDKMVQHGLKPD 471
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + +++ GKQ+HA +I F + + L+ Y + A V + + W
Sbjct: 280 CGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSW 339
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIE 172
++ + + EA+ + M R + PD +T + AC + G + H KAI
Sbjct: 340 TAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAIT 399
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
G + + + V N+LV++Y K G ++ + LF+ M RD VSW ++S YA G E +
Sbjct: 400 SGLIHY-VTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 233 LFERMQEEGVE 243
LF++M + G++
Sbjct: 459 LFDKMVQHGLK 469
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C NV+SL G Q H + I+ G + LV+ Y + DD+ + + + + W
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI-- 171
++S + + VE + + KM++ + PD T V+ AC G K +
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP-ERDDVSWNTIISCYASRGT 226
E G + S+ ++ ++ ++++ G+LE A + MP D + W T++S ++G
Sbjct: 501 EYGIVP-SIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 345 bits (884), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 209/613 (34%), Positives = 332/613 (54%), Gaps = 45/613 (7%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPR-LVSFYARFNLFDDACIVTESSSSLEPLHWNMLIS 118
L G+++H VI+ G + + LV+ YA+ DA V + + + WN +I+
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 119 MFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGSMG 177
+N F+EA+ Y+ M R ++P FT S L +C L G ++H +++++G +
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG-ID 447
Query: 178 WSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYA-SRGTWGEAFKLFER 236
++ V NAL+++YA+ G L R +F +MPE D VSWN+II A S + EA F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGAL 296
Q G ++N I ++++ ++ G
Sbjct: 508 AQRAGQKLNRITFSSVL------------------------SAVSSLSFG---------- 533
Query: 297 KLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRM-EEKGLITWNAMLSG 355
+LGK+IHG A++ NALI Y +CG++ +F RM E + +TWN+M+SG
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH-CYIMKREQFK 414
+ H + + + L ML G + A+VL A +A L+ G E H C + R +
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV--RACLE 651
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
+++ + LVDMY++ G++ A R F+++ R+ ++ +MI GY G+G+ AL +FE M
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711
Query: 475 -CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAG 533
+ PDHV V VL+ACSH+GL+ +G F+ M D YG+ PRIEH++CMAD+ GRAG
Sbjct: 712 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAG 771
Query: 534 LLNKAKEIITRMPYKPTPAMWATLIGA-CRIHGNTV-LGEWAAGKLLEMKPDHSGYYILI 591
L+K ++ I +MP KP +W T++GA CR +G LG+ AA L +++P+++ Y+L+
Sbjct: 772 ELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLL 831
Query: 592 ANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLM 651
NMYAA G W +L + R M++ VKK G +WV + F GD S+P A IY +
Sbjct: 832 GNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKL 891
Query: 652 DGLNELMKDAGYI 664
LN M+DAGY+
Sbjct: 892 KELNRKMRDAGYV 904
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 198/468 (42%), Gaps = 80/468 (17%)
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNEL 125
H+++ D++ + L++ Y A V + + W ++S + RN
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 126 FVEALSAYRKMLRKQVIPDEFTYPSVLKACGEL--LDCASGVEVHKAIEVGSMGWSLFVH 183
EAL R M+++ + +++ + SVL+AC E+ + G ++H + S V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 184 NALVSMYAK-FGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERM----- 237
N L+SMY K G + A F ++ ++ VSWN+IIS Y+ G AF++F M
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 238 --------------------------------QEEGVEMNIIIWNTMAGGYLHAGNFKGA 265
Q+ G+ ++ + + + + +G+ A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 266 LKLLSQMRTSIHLDHVAMVVGL-------------------------------------N 288
K+ +QM T + ++VGL +
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYS 322
Query: 289 ACSHIGALKLGKEIHGHAVRTGF-DVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
+G LK G+E+HGH + TG D + + N L+ MY++CG + A +F M +K +
Sbjct: 323 LAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
+WN+M++G E ++ M P T+ S L CA + + G++ H
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 441
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMI 455
+K + + N L+ +YA +G + E +++F S+ D+V++ ++I
Sbjct: 442 LKL-GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII 488
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 191/447 (42%), Gaps = 50/447 (11%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C ++ G+Q+H + + LG D N + L++ YA ++ + S + + W
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 114 NMLISMFVRNELFV-EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
N +I R+E + EA+ + R + T+ SVL A L G ++H
Sbjct: 485 NSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPE-RDDVSWNTIISCYASRGTWGEAF 231
++ NAL++ Y K G+++ +F M E RD+V+WN++IS
Sbjct: 545 KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS------------ 592
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNAC 290
GY+H AL L+ M +T LD L+A
Sbjct: 593 -----------------------GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAF 629
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ + L+ G E+H +VR + V +AL+ MYS+CG L +A F M + +WN
Sbjct: 630 ASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWN 689
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
+M+SG+A + +E LF M +G P++VT VL C+ L+ G + +
Sbjct: 690 SMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSD 749
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEV-----TYTAMIRGYGMKGE- 463
+ ++ + D+ R+G++ + + + + + V A R G K E
Sbjct: 750 SYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAEL 809
Query: 464 GQMALNIFEEMCKFKIKPDHVAMVAVL 490
G+ A + F+++P++ +L
Sbjct: 810 GKKAAEML-----FQLEPENAVNYVLL 831
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 40/300 (13%)
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
+++ N L++ Y + G AR +FD MP R+ VSW I+S Y+ G EA M +
Sbjct: 36 VYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVK 95
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKL- 298
EG+ N A V L AC IG++ +
Sbjct: 96 EGIFSN----------------------------------QYAFVSVLRACQEIGSVGIL 121
Query: 299 -GKEIHGHAVRTGFDVLDNVRNALITMYSRC-GDLGHAYMLFQRMEEKGLITWNAMLSGF 356
G++IHG + + V V N LI+MY +C G +G+A F +E K ++WN+++S +
Sbjct: 122 FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIA--NLQHGKEFHCYIMKREQFK 414
+ +F M ++G+ P T S++ + +++ ++ C I K
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
+ L + + LV +A+SG + A++VF+ + R+ VT ++ G + G+ A +F +M
Sbjct: 242 D-LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 19/298 (6%)
Query: 272 MRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDL 331
M + L V VG H GA + H + D + N LI Y GD
Sbjct: 1 MTNCVPLSFVQSCVG-----HRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDS 52
Query: 332 GHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLC 391
A +F M + ++W ++SG++ E R M+ EG N SVL C
Sbjct: 53 VSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRAC 112
Query: 392 ARIAN--LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARS-GKVLEAKRVFDSLTRRDE 448
I + + G++ H +M + + ++ N L+ MY + G V A F + ++
Sbjct: 113 QEIGSVGILFGRQIHG-LMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNS 171
Query: 449 VTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVA-VLTACSHSGLVAQGQVLFQ 507
V++ ++I Y G+ + A IF M +P + V TACS L L +
Sbjct: 172 VSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLE 228
Query: 508 EM---VDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACR 562
++ + G++ + + + F ++G L+ A+++ +M + + ++G R
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/603 (32%), Positives = 314/603 (52%), Gaps = 41/603 (6%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+ +H Q + G D ++ +V Y +F +DA V + + + WN +IS + +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 123 NELFVEALSAYRKMLRKQVIP-DEFTYPSVLKACGELLDCASGVEVHK-AIEVGSMGWSL 180
NE++VE++ +R ++ + D T +L A EL + G+++H A + G
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD- 256
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
+V +S+Y+K GK+++ LF + D
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPD------------------------------ 286
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGK 300
I+ +N M GY G + +L L ++ S + +V L S G L L
Sbjct: 287 -----IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS--GHLMLIY 339
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
IHG+ +++ F +V AL T+YS+ ++ A LF EK L +WNAM+SG+
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLW 420
++ LFR+M PN VTI +L CA++ L GK H +++ F+ + +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH-DLVRSTDFESSIYVS 458
Query: 421 NTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIK 480
L+ MYA+ G + EA+R+FD +T+++EVT+ MI GYG+ G+GQ ALNIF EM I
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518
Query: 481 PDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKE 540
P V + VL ACSH+GLV +G +F M+ YG P ++HYACM D+ GRAG L +A +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ 578
Query: 541 IITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGC 600
I M +P ++W TL+GACRIH +T L + KL E+ PD+ GY++L++N+++A
Sbjct: 579 FIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRN 638
Query: 601 WSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKD 660
+ + A VR + + KAPG +++G F GD S+P EIY ++ L M++
Sbjct: 639 YPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMRE 698
Query: 661 AGY 663
AGY
Sbjct: 699 AGY 701
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 194/610 (31%), Positives = 316/610 (51%), Gaps = 38/610 (6%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNM 115
N+ + G+ LH + G + ++ LV+ Y +F DA V + + + +N
Sbjct: 219 NLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNT 278
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
+I +++ E+ E++ + + L Q PD T SVL+ACG L D + ++ +
Sbjct: 279 MICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
V N L+ +YAK G + AR +F++M +D VS
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS---------------------- 375
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNACSHIG 294
WN++ GY+ +G+ A+KL M DH+ ++ ++ + +
Sbjct: 376 -------------WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 295 ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLS 354
LK GK +H + +++G + +V NALI MY++CG++G + +F M +TWN ++S
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
+ QM P+ T LP+CA +A + GKE HC ++ R ++
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYE 541
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
L + N L++MY++ G + + RVF+ ++RRD VT+T MI YGM GEG+ AL F +M
Sbjct: 542 SELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM 601
Query: 475 CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGL 534
K I PD V +A++ ACSHSGLV +G F++M Y I P IEHYAC+ DL R+
Sbjct: 602 EKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQK 661
Query: 535 LNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANM 594
++KA+E I MP KP ++WA+++ ACR G+ E + +++E+ PD GY IL +N
Sbjct: 662 ISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNA 721
Query: 595 YAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGL 654
YAA W +++ +R +++ + K PG +W++VG F GD S P + IY ++ L
Sbjct: 722 YAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Query: 655 NELMKDAGYI 664
LM GYI
Sbjct: 782 YSLMAKEGYI 791
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 268/539 (49%), Gaps = 44/539 (8%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH-WN 114
N+N L +++HA VISLG D + +L+ Y+ F + V S + ++ WN
Sbjct: 19 NLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWN 75
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVG 174
+I F +N LF EAL Y K+ +V PD++T+PSV+KAC L D G V++ I
Sbjct: 76 SIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM 135
Query: 175 SMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLF 234
LFV NALV MY++ G L AR +FD MP RD VSWN++IS Y+S G + EA +++
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 235 ERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIG 294
++ W I D + L A ++
Sbjct: 196 HELKNS--------W--------------------------IVPDSFTVSSVLPAFGNLL 221
Query: 295 ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLS 354
+K G+ +HG A+++G + + V N L+ MY + A +F M+ + +++N M+
Sbjct: 222 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC 281
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
G+ ++ V+E +F + L + +P+ +T++SVL C + +L K + Y++K F
Sbjct: 282 GYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK-AGFV 339
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
+ N L+D+YA+ G ++ A+ VF+S+ +D V++ ++I GY G+ A+ +F+ M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 475 CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGL 534
+ + DH+ + +++ + + G+ L + GI + + D++ + G
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGE 458
Query: 535 LNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLL--EMKPDHSGYYILI 591
+ + +I + M T W T+I AC G+ G ++ E+ PD + + + +
Sbjct: 459 VGDSLKIFSSMGTGDT-VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 255/551 (46%), Gaps = 49/551 (8%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + G ++ Q++ +GF+ + + LV Y+R L A V + + +
Sbjct: 115 ACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS 174
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN LIS + + + EAL Y ++ ++PD FT SVL A G LL G +H
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL 234
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ + V+N LV+MY KF + AR +FD M RD VS+NT+I Y K
Sbjct: 235 KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY---------LK 285
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
L M EE V M L+ L Q + D + + L AC H
Sbjct: 286 L--EMVEESVRM--------------------FLENLDQFKP----DLLTVSSVLRACGH 319
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+ L L K I+ + ++ GF + VRN LI +Y++CGD+ A +F ME K ++WN++
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
+SG+ + E LF+ M+ + +++T ++ + R+A+L+ GK H +K
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
+ L + N L+DMYA+ G+V ++ ++F S+ D VT+ +I G+ L +
Sbjct: 440 CID-LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
+M K ++ PD + L C+ G+ + ++ +G ++ + +++ +
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNALIEMYSKC 557
Query: 533 GLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMK-----PDHSGY 587
G L + + RM + W +I A ++G GE A +M+ PD
Sbjct: 558 GCLENSSRVFERMSRRDV-VTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDS--- 610
Query: 588 YILIANMYAAA 598
+ IA +YA +
Sbjct: 611 VVFIAIIYACS 621
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 5/221 (2%)
Query: 286 GLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE-K 344
L++ S++ L+ IH + G D D LI YS + + +F+R+ K
Sbjct: 13 ALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 345 GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH 404
+ WN+++ F+ E + ++ P+ T SV+ CA + + + G +
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 405 CYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEG 464
I+ F+ L + N LVDMY+R G + A++VFD + RD V++ ++I GY G
Sbjct: 130 EQILDM-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 465 QMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVL 505
+ AL I+ E+ I PD + +VL A + +V QGQ L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 39/265 (14%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C ++ + GK++H ++ G++ + L+ Y++ +++ V E S + + W
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTW 578
Query: 114 NMLI---SMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACG------ELLDCASG 164
+I M+ E +AL + M + ++PD + +++ AC E L C
Sbjct: 579 TGMIYAYGMYGEGE---KALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEK 635
Query: 165 VEVHKAIEVGSMGWSLFVHNA-LVSMYAKFGKLEVARHLFDNMPERDDVS-WNTIISCYA 222
++ H I+ + H A +V + ++ K+ A MP + D S W +++
Sbjct: 636 MKTHYKID------PMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACR 689
Query: 223 SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGY-LHAGNFKGALK---LLSQMRTSIHL 278
+ G A E V II N GY + A N AL+ +S +R S+
Sbjct: 690 TSGDMETA---------ERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKD 740
Query: 279 DHVAMVVGLNACSHIGALKLGKEIH 303
H+ G + +++GK +H
Sbjct: 741 KHITKNPGYS------WIEVGKNVH 759
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 339 bits (870), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 205/644 (31%), Positives = 339/644 (52%), Gaps = 47/644 (7%)
Query: 64 KQLHAQVISLGFD-QNTIMLPRLVSFYARFNLFDDACIVTESSSS--LEPLH-WNMLISM 119
+Q+HAQV+ F ++ + L+S YAR L DA V E+ S L L WN ++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 120 FVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGSMGW 178
V + L+ AL YR M ++ + D + P +L+AC L H + I++G +
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIG-LKE 191
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQ 238
+L V N L+++Y K G++ A +LF MP R+ +SWN +I ++ A K+FE MQ
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 239 EEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIH-LDHVAMVVGLNACSHIGALK 297
E + + + W ++ + G F+ LK MR S + + A+ V + C+ + AL
Sbjct: 252 REEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALS 311
Query: 298 LGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFA 357
+ +++HG+ ++ GF+ RNALI +Y + G + A LF+++ KG+ +WN++++ F
Sbjct: 312 IAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFV 371
Query: 358 HMDRVDEVSFLF---------------------------------------RQMLHEGAE 378
++DE LF RQM
Sbjct: 372 DAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL 431
Query: 379 PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKR 438
N VTI +L +CA + L G+E H +++ R E +L+ N LV+MYA+ G + E
Sbjct: 432 ANSVTICCILSICAELPALNLGREIHGHVI-RTSMSENILVQNALVNMYAKCGLLSEGSL 490
Query: 439 VFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGL 498
VF+++ +D +++ ++I+GYGM G + AL++F+ M PD +A+VAVL+ACSH+GL
Sbjct: 491 VFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGL 550
Query: 499 VAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
V +G+ +F M +G+ P+ EHYAC+ DL GR G L +A EI+ MP +P + L+
Sbjct: 551 VEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALL 610
Query: 559 GACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKK 618
+CR+H N + E A +L ++P+ +G Y+L++N+Y+A G W E A VR + +KK
Sbjct: 611 NSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKK 670
Query: 619 APGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAG 662
G +W++V + F G IYP+++ L M G
Sbjct: 671 VSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + +L+ G+++H VI +N ++ LV+ YA+ L + +V E+ + + W
Sbjct: 444 CAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISW 503
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +I + + +ALS + +M+ PD +VL AC G E+ ++
Sbjct: 504 NSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSK 563
Query: 174 GSMGWSLFVHNA-LVSMYAKFGKLEVARHLFDNMP 207
H A +V + + G L+ A + NMP
Sbjct: 564 RFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 338 bits (868), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 294/553 (53%), Gaps = 38/553 (6%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN+ + LF E++S YR MLR PD F++P +LK+C L SG ++H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVS--WNTIISCYASRGTWGEA 230
G FV AL+SMY K G + AR +F+ P+ +S +N +IS Y + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
+F RM+E T + +D V M+ + C
Sbjct: 141 AYMFRRMKE----------------------------------TGVSVDSVTMLGLVPLC 166
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ L LG+ +HG V+ G D V N+ ITMY +CG + LF M KGLITWN
Sbjct: 167 TVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWN 226
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
A++SG++ +V L+ QM G P+ T+ SVL CA + + G E +++
Sbjct: 227 AVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVG-KLVES 285
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
F + + N + MYAR G + +A+ VFD + + V++TAMI YGM G G++ L +
Sbjct: 286 NGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLML 345
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
F++M K I+PD V VL+ACSHSGL +G LF+ M +Y + P EHY+C+ DL G
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLG 405
Query: 531 RAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYIL 590
RAG L++A E I MP +P A+W L+GAC+IH N + E A K++E +P++ GYY+L
Sbjct: 406 RAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVL 465
Query: 591 IANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPL 650
++N+Y+ + + +R MR +K PG ++V+ G F GD S+ E++ +
Sbjct: 466 MSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRM 525
Query: 651 MDGL-NELMKDAG 662
+D L +M+ AG
Sbjct: 526 LDELETSVMELAG 538
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 196/443 (44%), Gaps = 43/443 (9%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESS--SSLEPL 111
C +++ G+QLH V G + +L L+S Y + L DA V E + SS +
Sbjct: 63 CASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSV 122
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
+N LIS + N +A +R+M V D T ++ C G +H
Sbjct: 123 CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC 182
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
G + + V N+ ++MY K G +E R LFD MP + ++WN +IS Y+ G +
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVL 242
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
+L+E+M+ GV D +V L++C+
Sbjct: 243 ELYEQMKSSGV----------------------------------CPDPFTLVSVLSSCA 268
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
H+GA K+G E+ GF V NA I+MY+RCG+L A +F M K L++W A
Sbjct: 269 HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTA 328
Query: 352 MLSGFAHMDRVDEVSF-LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
M+ + M + E+ LF M+ G P+ VL C+ G E MKR
Sbjct: 329 MIGCYG-MHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKR 386
Query: 411 E-QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-TRRDEVTYTAMIRGYGMKGEGQMAL 468
E + + ++ LVD+ R+G++ EA +S+ D + A++ + MA
Sbjct: 387 EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAE 446
Query: 469 NIFEEMCKFKIKPDHVAMVAVLT 491
F ++ +F +P+++ +++
Sbjct: 447 LAFAKVIEF--EPNNIGYYVLMS 467
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 196/598 (32%), Positives = 312/598 (52%), Gaps = 25/598 (4%)
Query: 80 IMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWN--MLISMFVRNELFVEALSAY--RK 135
I+ L SF+A F D P H + +++ R F EA+ +K
Sbjct: 16 ILKRNLSSFHASLKRFSD-------KKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQK 68
Query: 136 MLRKQV-------IPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVS 188
+LR+ V P TY ++++ C + G +VH+ I + + N L+
Sbjct: 69 LLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLR 128
Query: 189 MYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIII 248
MYAK G L AR +FD MP RD SWN +++ YA G EA KLF+ M E+ +
Sbjct: 129 MYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYS 184
Query: 249 WNTMAGGYLHAGNFKGALKLLSQMR--TSIHLDHVAMVVGLNACSHIGALKLGKEIHGHA 306
W M GY+ + AL L S M+ + + + + + A + + ++ GKEIHGH
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Query: 307 VRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVS 366
VR G D + + ++L+ MY +CG + A +F ++ EK +++W +M+ + R E
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGF 304
Query: 367 FLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDM 426
LF +++ PN T A VL CA + + GK+ H Y M R F Y ++LVDM
Sbjct: 305 SLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGY-MTRVGFDPYSFASSSLVDM 363
Query: 427 YARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAM 486
Y + G + AK V D + D V++T++I G G+ AL F+ + K KPDHV
Sbjct: 364 YTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
Query: 487 VAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMP 546
V VL+AC+H+GLV +G F + + + + +HY C+ DL R+G + K +I+ MP
Sbjct: 424 VNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP 483
Query: 547 YKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAE 606
KP+ +WA+++G C +GN L E AA +L +++P++ Y+ +AN+YAAAG W E +
Sbjct: 484 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGK 543
Query: 607 VRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
+R M+ +GV K PG +W ++ + F DTS+P +I + L + MK+ GY+
Sbjct: 544 MRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYV 601
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 198/464 (42%), Gaps = 71/464 (15%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C +L GK++H + + GF ++ RL+ YA+ DA V + + + W
Sbjct: 95 CSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSW 154
Query: 114 NMLISMFVRNELFVEALSAYRKMLRK----------------------------QVIPDE 145
N++++ + L EA + +M K Q +P+
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 146 ----FTYPSVLKACGELLDC-ASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVAR 200
FT S+ A + C G E+H I + + ++L+ MY K G ++ AR
Sbjct: 215 RPNIFTV-SIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEAR 273
Query: 201 HLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAG 260
++FD + E+D VSW ++I Y W E F LF + N Y AG
Sbjct: 274 NIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPN---------EYTFAG 324
Query: 261 NFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNA 320
LNAC+ + +LGK++HG+ R GFD ++
Sbjct: 325 -------------------------VLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 321 LITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN 380
L+ MY++CG++ A + + L++W +++ G A + DE F +L G +P+
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 381 YVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVF 440
+VT +VL C ++ G EF I ++ + + LVD+ ARSG+ + K V
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 441 DSLT-RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDH 483
+ + + + +++ G G +A +E+ FKI+P++
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL--FKIEPEN 521
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 36/226 (15%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C ++ + GKQ+H + +GFD + LV Y + + A V + + +
Sbjct: 328 ACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVS 387
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI- 171
W LI +N EAL + +L+ PD T+ +VL AC G+E +I
Sbjct: 388 WTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSIT 447
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER---------------------- 209
E + + + LV + A+ G+ E + + MP +
Sbjct: 448 EKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLA 507
Query: 210 -------------DDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
+ V++ T+ + YA+ G W E K+ +RMQE GV
Sbjct: 508 EEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGV 553
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 335 bits (860), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 314/614 (51%), Gaps = 39/614 (6%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + L G Q H+ +I +N + LV YA+ +DA + E + + W
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTW 497
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +I +V++E EA +++M ++ D S LKAC + G +VH
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ L ++L+ MY+K G ++ AR +F ++PE VS N +I+ Y S+ EA L
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVL 616
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI 293
F+ M GV + I + T+ + AC
Sbjct: 617 FQEMLTRGVNPSEITFATI----------------------------------VEACHKP 642
Query: 294 GALKLGKEIHGHAVRTGFDVL-DNVRNALITMYSRCGDLGHAYMLFQRMEE-KGLITWNA 351
+L LG + HG + GF + + +L+ MY + A LF + K ++ W
Sbjct: 643 ESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTG 702
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
M+SG + +E +++M H+G P+ T +VL +C+ +++L+ G+ H I
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEV-TYTAMIRGYGMKGEGQMALNI 470
+ L NTL+DMYA+ G + + +VFD + RR V ++ ++I GY G + AL I
Sbjct: 763 HDLDELT-SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKI 821
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
F+ M + I PD + + VLTACSH+G V+ G+ +F+ M+ YGI R++H ACM DL G
Sbjct: 822 FDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLG 881
Query: 531 RAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYIL 590
R G L +A + I KP +W++L+GACRIHG+ + GE +A KL+E++P +S Y+L
Sbjct: 882 RWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVL 941
Query: 591 IANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPL 650
++N+YA+ GCW + +R MR+ GVKK PG +W+DV F GD S+ G+I
Sbjct: 942 LSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMF 1001
Query: 651 MDGLNELMKDAGYI 664
++ L +LMKD +
Sbjct: 1002 LEDLYDLMKDDAVV 1015
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 236/509 (46%), Gaps = 49/509 (9%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNML 116
V +L G +HA+ I LG N + LVS Y++ + A V E+ + WN +
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSM 176
I + N + + + M D+FT+ S+L C D G + H I +
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
+LFV NALV MYAK G LE AR +F+ M +RD+V+WNTII Y EAF LF+R
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGAL 296
M N G + D + L AC+H+ L
Sbjct: 520 M-----------------------NLCGIVS-----------DGACLASTLKACTHVHGL 545
Query: 297 KLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF 356
GK++H +V+ G D + ++LI MYS+CG + A +F + E +++ NA+++G+
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY 605
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
+ + ++E LF++ML G P+ +T A+++ C + +L G +FH I KR E
Sbjct: 606 SQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEG 664
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLTR-RDEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
L +L+ MY S + EA +F L+ + V +T M+ G+ G + AL ++EM
Sbjct: 665 EYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR 724
Query: 476 KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEH------YACMADLF 529
+ PD V VL CS + +G+ + + +I + H + D++
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREGRAI-------HSLIFHLAHDLDELTSNTLIDMY 777
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLI 558
+ G + + ++ M + W +LI
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 252/538 (46%), Gaps = 45/538 (8%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH-----W 113
+L GK +H++ + LG D + +V YA+ V+ + + L W
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAK------CAQVSYAEKQFDFLEKDVTAW 128
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N ++SM+ + L ++ + Q+ P++FT+ VL C + G ++H ++
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK 188
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ + + ALV MYAK ++ AR +F+ + + + V W + S Y G EA +
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV 248
Query: 234 FERMQEEG----------------------------VEM---NIIIWNTMAGGYLHAGNF 262
FERM++EG EM +++ WN M G+ G
Sbjct: 249 FERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCE 308
Query: 263 KGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNAL 321
A++ MR +S+ + L+A + L LG +H A++ G V ++L
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSL 368
Query: 322 ITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNY 381
++MYS+C + A +F+ +EEK + WNAM+ G+AH +V LF M G +
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 382 VTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFD 441
T S+L CA +L+ G +FH I+K++ K L + N LVDMYA+ G + +A+++F+
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN-LFVGNALVDMYAKCGALEDARQIFE 487
Query: 442 SLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQ 501
+ RD VT+ +I Y A ++F+ M I D + + L AC+H + Q
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 502 GQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIG 559
G+ + V G+ + + + D++ + G++ A+++ + +P +M A + G
Sbjct: 548 GKQVHCLSV-KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 10/279 (3%)
Query: 295 ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLS 354
AL++GK +H ++ G D + NA++ +Y++C + +A F +E K + WN+MLS
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
++ + + +V F + PN T + VL CAR N++ G++ HC ++K +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM-GLE 192
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
LVDMYA+ ++ +A+RVF+ + + V +T + GY G + A+ +FE M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 475 CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGL 534
+PDH+A V V+ G + ++LF EM P + + M G+ G
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGC 307
Query: 535 LNKAKEIITRM---PYKPTPAMWATLIGACRIHGNTVLG 570
A E M K T + +++ A I N LG
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 161/398 (40%), Gaps = 62/398 (15%)
Query: 182 VHNALVSMYAKFGKLEVARHLFDNMPER--------DDVSWNTIISCYASRGTWGEAF-K 232
+H L+ + KL +R +FD MP+R V ++I S G G A
Sbjct: 44 IHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVD 103
Query: 233 LFERM--------QEEGVEMNIIIWNTMAGGYLHAGNFKGALK-LLSQMRTSIHLDHVAM 283
L+ + Q + +E ++ WN+M Y G L+ +S I +
Sbjct: 104 LYAKCAQVSYAEKQFDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTF 163
Query: 284 VVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE 343
+ L+ C+ ++ G++IH ++ G + AL+ MY++C + A +F+ + +
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD 223
Query: 344 KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
+ W + SG+ +E +F +M EG P++
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDH---------------------- 261
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGE 463
L + T+++ Y R GK+ +A+ +F ++ D V + MI G+G +G
Sbjct: 262 --------------LAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC 307
Query: 464 GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQ---GQVLFQEMVDDYGIIPRIE 520
+A+ F M K +K + +VL+A G+VA G V+ E + G+ I
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAI---GIVANLDLGLVVHAEAI-KLGLASNIY 363
Query: 521 HYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
+ + ++ + + A ++ + K W +I
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEK-NDVFWNAMI 400
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 320/615 (52%), Gaps = 47/615 (7%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + + + GKQLHAQVI L + I L++ Y RFN DA V + +
Sbjct: 177 ACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLIS 236
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASGVEVHKAI 171
W+ +I+ F + EALS ++ML V P+E+ + S LKAC LL G ++H
Sbjct: 237 WSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 296
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ + +L MYA+ G L AR +FD + D SW
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASW----------------- 339
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL-DHVAMVVGLNAC 290
N+II GY A+ + SQMR+S + D +++ L A
Sbjct: 340 -------------NVIIAGLANNGYADE-----AVSVFSQMRSSGFIPDAISLRSLLCAQ 381
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG-LITW 349
+ AL G +IH + ++ GF V N+L+TMY+ C DL + LF+ ++W
Sbjct: 382 TKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSW 441
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
N +L+ ++ E+ LF+ ML EP+++T+ ++L C I++L+ G + HCY +K
Sbjct: 442 NTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLK 501
Query: 410 R----EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQ 465
EQF + N L+DMYA+ G + +A+R+FDS+ RD V+++ +I GY G G+
Sbjct: 502 TGLAPEQF-----IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 556
Query: 466 MALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACM 525
AL +F+EM I+P+HV V VLTACSH GLV +G L+ M ++GI P EH +C+
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616
Query: 526 ADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHS 585
DL RAG LN+A+ I M +P +W TL+ AC+ GN L + AA +L++ P +S
Sbjct: 617 VDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNS 676
Query: 586 GYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAG 645
++L+ +M+A++G W A +R+ M+ VKK PG +W+++ + FF D +P
Sbjct: 677 TAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERD 736
Query: 646 EIYPLMDGLNELMKD 660
+IY ++ + M D
Sbjct: 737 DIYTVLHNIWSQMLD 751
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 235/542 (43%), Gaps = 47/542 (8%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + SL+ G+++H +++ +TI+ ++S Y + DA V + +
Sbjct: 76 ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 135
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+ +I+ + +N EA+ Y KML++ ++PD+F + S++KAC D G ++H +
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
L NAL++MY +F ++ A +F +P +D +SW++II+ ++ G EA
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
+ M GV H + L ACS
Sbjct: 256 HLKEMLSFGV---------------------------------FHPNEYIFGSSLKACSS 282
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+ G +IHG +++ +L MY+RCG L A +F ++E +WN +
Sbjct: 283 LLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVI 342
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
++G A+ DE +F QM G P+ +++ S+L + L G + H YI+K
Sbjct: 343 IAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKW-G 401
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR-DEVTYTAMIRGYGMKGEGQMALNIF 471
F L + N+L+ MY + +F+ D V++ ++ + L +F
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 472 EEMCKFKIKPDHVAMVAVLTACSH-SGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
+ M + +PDH+ M +L C S L QV + G+ P + D++
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL--KTGLAPEQFIKNGLIDMYA 519
Query: 531 RAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMK-----PDHS 585
+ G L +A+ I M + + W+TLI + + GE A EMK P+H
Sbjct: 520 KCGSLGQARRIFDSMDNRDVVS-WSTLIVG---YAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 586 GY 587
+
Sbjct: 576 TF 577
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 206/472 (43%), Gaps = 40/472 (8%)
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEF-TYPSVLKACGELLDCASGVEVHKAIEVGS 175
I+ ++ + EAL A+ + TY S++ AC A G ++H I +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ ++N ++SMY K G L AR +FD MPER+ VS+ ++I+ Y+ G EA +L+
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGA 295
+M +E ++ + A G + + AC+
Sbjct: 158 KMLQED-----LVPDQFAFGSI-----------------------------IKACASSSD 183
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSG 355
+ LGK++H ++ +NALI MY R + A +F + K LI+W+++++G
Sbjct: 184 VGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAG 243
Query: 356 FAHMDRVDEVSFLFRQMLHEGA-EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
F+ + E ++ML G PN S L C+ + +G + H +K E
Sbjct: 244 FSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE-LA 302
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
+ +L DMYAR G + A+RVFD + R D ++ +I G G A+++F +M
Sbjct: 303 GNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Query: 475 CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGL 534
PD +++ ++L A + ++QG + ++ +G + + + ++
Sbjct: 363 RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII-KWGFLADLTVCNSLLTMYTFCSD 421
Query: 535 LNKAKEIITRMPYKPTPAMWATLIGACRIHGNTV--LGEWAAGKLLEMKPDH 584
L + W T++ AC H V L + + E +PDH
Sbjct: 422 LYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 309/591 (52%), Gaps = 38/591 (6%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+ +H V+ G+ + ++ LV YA+FNLF+++ V + + WN +IS F +
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
+ +AL + +M P+ + + AC LL G E+H+ +V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
++ALV MY K LEVAR +F MP +
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRK--------------------------------- 272
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKE 301
+++ WN+M GY+ G+ K +++L++M + L ACS L GK
Sbjct: 273 --SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKF 330
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
IHG+ +R+ + V +LI +Y +CG+ A +F + ++ +WN M+S + +
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
+ ++ QM+ G +P+ VT SVLP C+++A L+ GK+ H I + + LLL +
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL-S 449
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
L+DMY++ G EA R+F+S+ ++D V++T MI YG G+ + AL F+EM KF +KP
Sbjct: 450 ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
D V ++AVL+AC H+GL+ +G F +M YGI P IEHY+CM D+ GRAG L +A EI
Sbjct: 510 DGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI 569
Query: 542 ITRMPYKPTPA-MWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGC 600
I + P A + +TL AC +H LG+ A L+E PD + Y+++ N+YA+
Sbjct: 570 IQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGES 629
Query: 601 WSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLM 651
W VR M+ +G++K PGC+W+++ + FF D S+ A +Y +
Sbjct: 630 WDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/539 (28%), Positives = 259/539 (48%), Gaps = 50/539 (9%)
Query: 54 CIN-VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C N SL K +H ++++LG ++ ++ L++ Y A V E+ ++
Sbjct: 13 CTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVY 72
Query: 113 -WNMLISMFVRNELFVEALSAYRKMLRKQV-IPDEFTYPSVLKACGELLDCASGVEVHKA 170
WN L+S + +N +F + L ++++L + +PD FT+P+V+KA G L G +H
Sbjct: 73 IWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTL 132
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ + V ++LV MYAKF E + +FD MPERD SWNT+ISC+ G +A
Sbjct: 133 VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKA 192
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
+LF RM+ G E N V++ V ++AC
Sbjct: 193 LELFGRMESSGFEPN----------------------------------SVSLTVAISAC 218
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
S + L+ GKEIH V+ GF++ + V +AL+ MY +C L A +FQ+M K L+ WN
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
+M+ G+ + +M+ EG P+ T+ S+L C+R NL HGK H Y++ R
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI-R 337
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
+ + +L+D+Y + G+ A+ VF + ++ MI Y G A+ +
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEH----YACMA 526
+++M +KPD V +VL ACS + +G+ + + + R+E + +
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE-----SRLETDELLLSALL 452
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN--TVLGEWAAGKLLEMKPD 583
D++ + G +A I +P K + W +I A HG L ++ + +KPD
Sbjct: 453 DMYSKCGNEKEAFRIFNSIPKKDVVS-WTVMISAYGSHGQPREALYQFDEMQKFGLKPD 510
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 177/388 (45%), Gaps = 34/388 (8%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + L GK++H + + GF+ + + LV Y + + + A V + +
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN +I +V + +M+ + P + T S+L AC + G +H +
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI 336
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ ++V+ +L+ +Y K G+ +A +F + SWN +IS Y S G W +A +
Sbjct: 337 RSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVE 396
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
++++M GV+ +++ + ++ L ACS
Sbjct: 397 VYDQMVSVGVKPDVVTFTSV----------------------------------LPACSQ 422
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+ AL+ GK+IH + + + + +AL+ MYS+CG+ A+ +F + +K +++W M
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVM 482
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
+S + + E + F +M G +P+ VT+ +VL C + G +F + +
Sbjct: 483 ISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYG 542
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVF 440
+ + ++ ++D+ R+G++LEA +
Sbjct: 543 IEPIIEHYSCMIDILGRAGRLLEAYEII 570
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 204/713 (28%), Positives = 335/713 (46%), Gaps = 105/713 (14%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTE----SSSSLEPL 111
N ++ K H + G D + + +LV+ + E S S
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 100
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
+N LI + + L EA+ + +M+ + PD++T+P L AC + +G+++H I
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
LFV N+LV YA+ G+L+ AR +FD M ER+ VSW ++I YA R +A
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 232 KLFERM------------------------------------QEEGVEMNIIIWNTMAGG 255
LF RM + G+E+N ++ + +
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 256 YLHAGNFKGALKLLSQ--------------------------------MRTSIHLDHVAM 283
Y+ A +L + M + + D ++M
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 284 VVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE 343
+ +++CS + + GK HG+ +R GF+ DN+ NALI MY +C A+ +F RM
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 344 KGLITWNAMLSGFAHMDRVDEVSFLFRQM------------------------------- 372
K ++TWN++++G+ VD F M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 373 -LHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSG 431
EG + VT+ S+ C + L K + YI ++ + + L TLVDM++R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLVDMFSRCG 519
Query: 432 KVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLT 491
A +F+SLT RD +TA I M G + A+ +F++M + +KPD VA V LT
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 492 ACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTP 551
ACSH GLV QG+ +F M+ +G+ P HY CM DL GRAGLL +A ++I MP +P
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 552 AMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYM 611
+W +L+ ACR+ GN + +AA K+ + P+ +G Y+L++N+YA+AG W+++A+VR M
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 612 RNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
+ G++K PG + + + G+ F GD S+P I ++D +++ G++
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHV 752
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 332 bits (852), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 204/713 (28%), Positives = 335/713 (46%), Gaps = 105/713 (14%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTE----SSSSLEPL 111
N ++ K H + G D + + +LV+ + E S S
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 100
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
+N LI + + L EA+ + +M+ + PD++T+P L AC + +G+++H I
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
LFV N+LV YA+ G+L+ AR +FD M ER+ VSW ++I YA R +A
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 232 KLFERM------------------------------------QEEGVEMNIIIWNTMAGG 255
LF RM + G+E+N ++ + +
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 256 YLHAGNFKGALKLLSQ--------------------------------MRTSIHLDHVAM 283
Y+ A +L + M + + D ++M
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 284 VVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE 343
+ +++CS + + GK HG+ +R GF+ DN+ NALI MY +C A+ +F RM
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 344 KGLITWNAMLSGFAHMDRVDEVSFLFRQM------------------------------- 372
K ++TWN++++G+ VD F M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 373 -LHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSG 431
EG + VT+ S+ C + L K + YI ++ + + L TLVDM++R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLVDMFSRCG 519
Query: 432 KVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLT 491
A +F+SLT RD +TA I M G + A+ +F++M + +KPD VA V LT
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 492 ACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTP 551
ACSH GLV QG+ +F M+ +G+ P HY CM DL GRAGLL +A ++I MP +P
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 552 AMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYM 611
+W +L+ ACR+ GN + +AA K+ + P+ +G Y+L++N+YA+AG W+++A+VR M
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 612 RNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
+ G++K PG + + + G+ F GD S+P I ++D +++ G++
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHV 752
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 194/655 (29%), Positives = 328/655 (50%), Gaps = 43/655 (6%)
Query: 12 FVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLHAQVI 71
+ + H AFK F + ++ + P GC + + Q+HA +
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPD-----HVTFTTLLPGCNDAVPQNAVGQVHAFAV 174
Query: 72 SLGFDQNTIMLPR--LVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEA 129
LGFD N + L+ Y D AC++ E + + +N LI+ + ++ L+ E+
Sbjct: 175 KLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTES 234
Query: 130 LSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSM 189
+ + KM + P +FT+ VLKA L D A G ++H V N ++
Sbjct: 235 IHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDF 294
Query: 190 YAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIW 249
Y+K ++ R LFD MPE D VS+N +IS Y+ + + F MQ G + +
Sbjct: 295 YSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPF 354
Query: 250 NTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRT 309
TM L+ +++ +L++G+++H A+
Sbjct: 355 ATM----------------------------------LSIAANLSSLQMGRQLHCQALLA 380
Query: 310 GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLF 369
D + +V N+L+ MY++C A ++F+ + ++ ++W A++SG+ LF
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 370 RQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYAR 429
+M + T A+VL A A+L GK+ H +I++ E + + LVDMYA+
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL-ENVFSGSGLVDMYAK 499
Query: 430 SGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAV 489
G + +A +VF+ + R+ V++ A+I + G+G+ A+ F +M + ++PD V+++ V
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 490 LTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKP 549
LTACSH G V QG FQ M YGI P+ +HYACM DL GR G +A++++ MP++P
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 550 TPAMWATLIGACRIHGNTVLGEWAAGKLLEM-KPDHSGYYILIANMYAAAGCWSELAEVR 608
MW++++ ACRIH N L E AA KL M K + Y+ ++N+YAAAG W ++ +V+
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 609 TYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
MR G+KK P +WV+V + F D ++P+ EI ++ L ++ GY
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGY 734
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 244/516 (47%), Gaps = 49/516 (9%)
Query: 77 QNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKM 136
+NT+ ++S + + A + ++ + W +L+ + RN F EA +R+M
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 137 LRKQ--VIPDEFTYPSVLKACGELLDCASGVEVHK-AIEVG-SMGWSLFVHNALVSMYAK 192
R +PD T+ ++L C + + + +VH A+++G L V N L+ Y +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 193 FGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTM 252
+L++A LF+ +PE+D V++NT+I+ Y G + E+ LF +M++ G + +
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDF----- 251
Query: 253 AGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFD 312
F G LK VVGL+ LG+++H +V TGF
Sbjct: 252 --------TFSGVLK---------------AVVGLH------DFALGQQLHALSVTTGFS 282
Query: 313 VLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQM 372
+V N ++ YS+ + MLF M E +++N ++S ++ D+ + FR+M
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 373 LHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGK 432
G + A++L + A +++LQ G++ HC + L + N+LVDMYA+
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA-DSILHVGNSLVDMYAKCEM 401
Query: 433 VLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
EA+ +F SL +R V++TA+I GY KG L +F +M ++ D VL A
Sbjct: 402 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 493 CSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPA 552
+ + G+ L ++ G + + + + D++ + G + A ++ MP +
Sbjct: 462 SASFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR-NAV 519
Query: 553 MWATLIGACRIHGNTVLGEWAAG---KLLE--MKPD 583
W LI A H + GE A G K++E ++PD
Sbjct: 520 SWNALISA---HADNGDGEAAIGAFAKMIESGLQPD 552
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 170/382 (44%), Gaps = 14/382 (3%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N +V + G++ AR ++D MP ++ VS NT+IS + G A LF+ M +
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDR--- 108
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL---DHVAMVVGLNACSHIGALKLGK 300
++ W + G Y +F A KL QM S DHV L C+
Sbjct: 109 -TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG 167
Query: 301 EIHGHAVRTGFDV--LDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAH 358
++H AV+ GFD V N L+ Y L A +LF+ + EK +T+N +++G+
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 359 MDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL 418
E LF +M G +P+ T + VL + + G++ H + F
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT-TGFSRDAS 286
Query: 419 LWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFK 478
+ N ++D Y++ +VLE + +FD + D V+Y +I Y + + +L+ F EM
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 479 IKPDHVAMVAVLT-ACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNK 537
+ +L+ A + S L Q+ Q ++ I + + + D++ + + +
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN--SLVDMYAKCEMFEE 404
Query: 538 AKEIITRMPYKPTPAMWATLIG 559
A+ I +P + T + W LI
Sbjct: 405 AELIFKSLPQRTTVS-WTALIS 425
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/589 (32%), Positives = 310/589 (52%), Gaps = 41/589 (6%)
Query: 80 IMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRK 139
I+ L+ Y L ++A + + + + W +I+ + + A + +M+++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 140 QVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFG-KLEV 198
P+EFT SVLK+C + A G VH + M SL+V NA+++MYA +E
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 199 ARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLH 258
A +F ++ ++DV+W T+ G+ H
Sbjct: 166 ACLIFRDIKVKNDVTWT-----------------------------------TLITGFTH 190
Query: 259 AGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNV 317
G+ G LK+ QM + + + + + A + I ++ GK+IH ++ GF V
Sbjct: 191 LGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPV 250
Query: 318 RNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGA 377
N+++ +Y RCG L A F ME+K LITWN ++S D E +F++ +G
Sbjct: 251 MNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGF 309
Query: 378 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAK 437
PN T S++ CA IA L G++ H I +R F + + L N L+DMYA+ G + +++
Sbjct: 310 VPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-GFNKNVELANALIDMYAKCGNIPDSQ 368
Query: 438 RVFDSLT-RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHS 496
RVF + RR+ V++T+M+ GYG G G A+ +F++M I+PD + +AVL+AC H+
Sbjct: 369 RVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHA 428
Query: 497 GLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWAT 556
GLV +G F M +YGI P + Y C+ DL GRAG + +A E++ RMP+KP + W
Sbjct: 429 GLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGA 488
Query: 557 LIGACRIHG-NTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLG 615
++GAC+ H N ++ AA K++E+KP G Y++++ +YAA G W + A VR MR +G
Sbjct: 489 ILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMG 548
Query: 616 VKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
KK G +W+ V + F V D P+A +Y ++ L E ++AGY+
Sbjct: 549 NKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYV 597
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 186/405 (45%), Gaps = 38/405 (9%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNL-FDDACIVTESSSSLEPLH 112
C N+ L+ G +H V+ LG + + + +++ YA ++ + AC++ +
Sbjct: 121 CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVT 180
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W LI+ F + L Y++ML + + ++A + +G ++H ++
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVI 240
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+L V N+++ +Y + G L A+H F M ++D ++WNT+IS R EA
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS-ELERSDSSEALL 299
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
+F+R + +G N + ++ AC++
Sbjct: 300 MFQRFESQGFVPNCYTFTSLVA----------------------------------ACAN 325
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLF-QRMEEKGLITWNA 351
I AL G+++HG R GF+ + NALI MY++CG++ + +F + ++ + L++W +
Sbjct: 326 IAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTS 385
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
M+ G+ E LF +M+ G P+ + +VL C ++ G ++ +
Sbjct: 386 MMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEY 445
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMI 455
++N +VD+ R+GK+ EA + + + + DE T+ A++
Sbjct: 446 GINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARF-NLFDDACIVTESSSSLEPL 111
C N+ +L+ G+QLH ++ GF++N + L+ YA+ N+ D + E +
Sbjct: 322 ACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLV 381
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
W ++ + + EA+ + KM+ + PD + +VL AC G++ +
Sbjct: 382 SWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVM 441
Query: 172 EVG-SMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP-ERDDVSWNTII-SCYASR 224
E + ++N +V + + GK+ A L + MP + D+ +W I+ +C A +
Sbjct: 442 ESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHK 497
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEE 473
K++ +L L+ Y G V EA+ +FD + RD V +TAMI GY A F E
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 474 MCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAG 533
M K P+ + +VL +C + ++A G L +V G+ + M +++
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYG-ALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 534 LLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIA 592
+ +A +I R W TLI G+ + G ++L + + Y I IA
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA 219
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 202/603 (33%), Positives = 304/603 (50%), Gaps = 72/603 (11%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRN 123
+ +H+++I N+ + +L+ YA A V + + N++I +V N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 124 ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH 183
+ E + + M V PD +T+P VLKAC G ++H + + +LFV
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N LVSMY K G L AR + D M RD VS
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVS------------------------------ 208
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVA--MVVGLNACSHIGALKLGKE 301
WN++ GY F AL++ +M S+ + H A M L A S+
Sbjct: 209 -----WNSLVVGYAQNQRFDDALEVCREME-SVKISHDAGTMASLLPAVSNT-------- 254
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
+NV MY + +F +M +K L++WN M+ +
Sbjct: 255 -----------TTENV------MYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAM 289
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
E L+ +M +G EP+ V+I SVLP C + L GK+ H YI +R++ LLL N
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI-ERKKLIPNLLLEN 348
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
L+DMYA+ G + +A+ VF+++ RD V++TAMI YG G G A+ +F ++ + P
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
D +A V L ACSH+GL+ +G+ F+ M D Y I PR+EH ACM DL GRAG + +A
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468
Query: 542 ITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCW 601
I M +P +W L+GACR+H +T +G AA KL ++ P+ SGYY+L++N+YA AG W
Sbjct: 469 IQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 528
Query: 602 SELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDA 661
E+ +R M++ G+KK PG + V+V F VGD S+P + EIY +D L + MK+
Sbjct: 529 EEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKEL 588
Query: 662 GYI 664
GY+
Sbjct: 589 GYV 591
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 160/396 (40%), Gaps = 75/396 (18%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C ++ G+++H +G + LVS Y + +A +V + S + +
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN L+ + +N+ F +AL R+M ++ D T S+L A
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA------------------ 250
Query: 173 VGSMGWSLFVHNALVS--MYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
V N MY K +F M ++ VSWN +I Y EA
Sbjct: 251 ---------VSNTTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
+L+ RM+ +G E D V++ L AC
Sbjct: 294 VELYSRMEADGFEP----------------------------------DAVSITSVLPAC 319
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
AL LGK+IHG+ R + NALI MY++CG L A +F+ M+ + +++W
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
AM+S + R + LF ++ G P+ + + L C+ L+ G+ C+ +
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRS--CFKLMT 437
Query: 411 EQFK--EYLLLWNTLVDMYARSGKVLEAKRVFDSLT 444
+ +K L +VD+ R+GKV EA R ++
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMS 473
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 264/438 (60%), Gaps = 7/438 (1%)
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS--IHLDHVAMVVGL 287
A K+F ++++ +N+ IWNT+ GY GN A L +MR S + D +
Sbjct: 72 AHKVFSKIEKP---INVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
A + + ++LG+ IH +R+GF L V+N+L+ +Y+ CGD+ AY +F +M EK L+
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
WN++++GFA + +E L+ +M +G +P+ TI S+L CA+I L GK H Y+
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
+K L N L+D+YAR G+V EAK +FD + ++ V++T++I G + G G+ A
Sbjct: 249 IKV-GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 468 LNIFEEMCKFK-IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
+ +F+ M + + P + V +L ACSH G+V +G F+ M ++Y I PRIEH+ CM
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSG 586
DL RAG + KA E I MP +P +W TL+GAC +HG++ L E+A ++L+++P+HSG
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 587 YYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGE 646
Y+L++NMYA+ WS++ ++R M GVKK PG + V+VG F +GD S+P +
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDA 487
Query: 647 IYPLMDGLNELMKDAGYI 664
IY + + ++ GY+
Sbjct: 488 IYAKLKEMTGRLRSEGYV 505
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 201/444 (45%), Gaps = 50/444 (11%)
Query: 54 CIN------VNSLSPGKQLHAQVISLGFDQNTIMLPR-----LVSFYARFNLFDDACIVT 102
CIN V+S++ +Q+HA I G + L + LVS + + + +
Sbjct: 18 CINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFS 77
Query: 103 ESSSSLEPLHWNMLISMFVRNELFVEALSAYRKM-LRKQVIPDEFTYPSVLKACGELLDC 161
+ + WN LI + + A S YR+M + V PD TYP ++KA + D
Sbjct: 78 KIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADV 137
Query: 162 ASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCY 221
G +H + G ++V N+L+ +YA G + A +FD MPE+D V+WN++I+ +
Sbjct: 138 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 197
Query: 222 ASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHV 281
A G EA L+ M +G++ D
Sbjct: 198 AENGKPEEALALYTEMNSKGIKP----------------------------------DGF 223
Query: 282 AMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRM 341
+V L+AC+ IGAL LGK +H + ++ G + N L+ +Y+RCG + A LF M
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 342 EEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLH-EGAEPNYVTIASVLPLCARIANLQHG 400
+K ++W +++ G A E LF+ M EG P +T +L C+ ++ G
Sbjct: 284 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 343
Query: 401 KEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVT-YTAMIRGYG 459
E+ + + + + + + +VD+ AR+G+V +A S+ + V + ++
Sbjct: 344 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 403
Query: 460 MKGEGQMALNIFEEMCKFKIKPDH 483
+ G+ +A F + +++P+H
Sbjct: 404 VHGDSDLAE--FARIQILQLEPNH 425
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 285/524 (54%), Gaps = 10/524 (1%)
Query: 144 DEFTYPSVLKACGELLDCASGVEVHK-AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHL 202
D+F++ +LKA ++ G+E+H A ++ ++ FV + MYA G++ AR++
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATL-CDPFVETGFMDMYASCGRINYARNV 168
Query: 203 FDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNF 262
FD M RD V+WNT+I Y G EAFKLFE M++ V + +I + GN
Sbjct: 169 FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 263 KGALKLLS-QMRTSIHLDHVAMVVGLNACSHIGALKLGKEI-HGHAVRTGFDVLDNVRNA 320
+ + + + +D + + + G + + +E +VR F V A
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF-----VSTA 283
Query: 321 LITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN 380
+++ YS+CG L A ++F + E+K L+ W M+S + D E +F +M G +P+
Sbjct: 284 MVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPD 343
Query: 381 YVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVF 440
V++ SV+ CA + L K H I + L + N L++MYA+ G + + VF
Sbjct: 344 VVSMFSVISACANLGILDKAKWVHSCI-HVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 441 DSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVA 500
+ + RR+ V++++MI M GE AL++F M + ++P+ V V VL CSHSGLV
Sbjct: 403 EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Query: 501 QGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGA 560
+G+ +F M D+Y I P++EHY CM DLFGRA LL +A E+I MP +W +L+ A
Sbjct: 463 EGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Query: 561 CRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAP 620
CRIHG LG++AA ++LE++PDH G +L++N+YA W ++ +R M V K
Sbjct: 523 CRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEK 582
Query: 621 GCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
G + +D G+ F +GD + + EIY +D + +K AGY+
Sbjct: 583 GLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYV 626
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 205/439 (46%), Gaps = 12/439 (2%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNML 116
V++L G +LH + + + + YA + A V + S + + WN +
Sbjct: 124 VSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTM 183
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSM 176
I + R L EA + +M V+PDE +++ ACG + +++ + +
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDV 243
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
+ ALV+MYA G +++AR F M R+ ++S Y+ G +A +F++
Sbjct: 244 RMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ 303
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGA 295
+++ +++ W TM Y+ + + AL++ +M S I D V+M ++AC+++G
Sbjct: 304 TEKK----DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSG 355
L K +H G + ++ NALI MY++CG L +F++M + +++W++M++
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA 419
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKE 415
+ + LF +M E EPN VT VL C+ ++ GK+ +
Sbjct: 420 LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITP 479
Query: 416 YLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKG---EGQMALNIFE 472
L + +VD++ R+ + EA V +S+ V +I G M G++ L F
Sbjct: 480 KLEHYGCMVDLFGRANLLREALEVIESMP----VASNVVIWGSLMSACRIHGELELGKFA 535
Query: 473 EMCKFKIKPDHVAMVAVLT 491
+++PDH + +++
Sbjct: 536 AKRILELEPDHDGALVLMS 554
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 306/643 (47%), Gaps = 78/643 (12%)
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNE 124
QLHA+++ + + +L+SFY R + F A V + + +N L+ + E
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 125 LFVEALSAYRKMLRKQVI------PDEFTYPSVLKA---CGELLDCASGVEVHKAIEVGS 175
++ +A S + + PD + VLKA C + + +VH + G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+FV N +++ Y K +E AR +FD M ERD
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERD------------------------- 197
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR--TSIHLDHVAMVVGLNACSHI 293
++ WN+M GY +G+F+ K+ M + + V ++ AC
Sbjct: 198 ----------VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQS 247
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK--------- 344
L G E+H + + ++ NA+I Y++CG L +A LF M EK
Sbjct: 248 SDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAII 307
Query: 345 ----------------------GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYV 382
GL TWNAM+SG + +EV FR+M+ G+ PN V
Sbjct: 308 SGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTV 367
Query: 383 TIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDS 442
T++S+LP +NL+ GKE H + + R + + +++D YA+ G +L A+RVFD+
Sbjct: 368 TLSSLLPSLTYSSNLKGGKEIHAFAI-RNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDN 426
Query: 443 LTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQG 502
R + +TA+I Y + G+ A ++F++M KPD V + AVL+A +HSG
Sbjct: 427 CKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMA 486
Query: 503 QVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACR 562
Q +F M+ Y I P +EHYACM + RAG L+ A E I++MP P +W L+
Sbjct: 487 QHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGAS 546
Query: 563 IHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGC 622
+ G+ + +A +L EM+P+++G Y ++AN+Y AG W E VR M+ +G+KK PG
Sbjct: 547 VLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGT 606
Query: 623 AWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYIR 665
+W++ F D+S + E+Y +++GL E M D YIR
Sbjct: 607 SWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYIR 649
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 215/445 (48%), Gaps = 17/445 (3%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC + S +Q+H VI GFD + + ++++Y + + + A V + S + +
Sbjct: 141 GCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVS 200
Query: 113 WNMLISMFVRNELFVEALSAYRKMLR-KQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN +IS + ++ F + Y+ ML P+ T SV +ACG+ D G+EVHK +
Sbjct: 201 WNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKM 260
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ L + NA++ YAK G L+ AR LFD M E+D V++ IIS Y + G EA
Sbjct: 261 IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAM 320
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNAC 290
LF M+ G+ WN M G + + + + +M R + V + L +
Sbjct: 321 ALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSL 376
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
++ LK GKEIH A+R G D V ++I Y++ G L A +F +++ LI W
Sbjct: 377 TYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWT 436
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
A+++ +A D LF QM G +P+ VT+ +VL A + + ++ +
Sbjct: 437 AIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTK 496
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEA-----KRVFDSLTRRDEVTYTAMIRGYGMKGEGQ 465
+ + + +V + +R+GK+ +A K D + + + A++ G + G+ +
Sbjct: 497 YDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAK----VWGALLNGASVLGDLE 552
Query: 466 MALNIFEEMCKFKIKPDHVAMVAVL 490
+A + + F+++P++ ++
Sbjct: 553 IARFACDRL--FEMEPENTGNYTIM 575
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 301/566 (53%), Gaps = 46/566 (8%)
Query: 109 EPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH 168
+ WN +I+ R+ EAL A+ M + + P ++P +KAC L D SG + H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+ V +FV +AL+ MY+ GKLE AR +FD +P+R
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR------------------- 140
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-------RTSIHLDHV 281
NI+ W +M GY GN A+ L + ++ LD +
Sbjct: 141 ----------------NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM 184
Query: 282 AMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYM--LFQ 339
+V ++ACS + A L + IH ++ GFD +V N L+ Y++ G+ G A +F
Sbjct: 185 GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFD 244
Query: 340 RMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEP-NYVTIASVLPLCARIANLQ 398
++ +K +++N+++S +A +E +FR+++ N +T+++VL + L+
Sbjct: 245 QIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR 304
Query: 399 HGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGY 458
GK H ++ R ++ +++ +++DMY + G+V A++ FD + ++ ++TAMI GY
Sbjct: 305 IGKCIHDQVI-RMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 459 GMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPR 518
GM G AL +F M ++P+++ V+VL ACSH+GL +G F M +G+ P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 519 IEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLL 578
+EHY CM DL GRAG L KA ++I RM KP +W++L+ ACRIH N L E + +L
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 579 EMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGD 638
E+ + GYY+L++++YA AG W ++ VR M+N G+ K PG + +++ GE F +GD
Sbjct: 484 ELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Query: 639 TSNPHAGEIYPLMDGLNELMKDAGYI 664
+P +IY + LN + +AGY+
Sbjct: 544 EEHPQREKIYEFLAELNRKLLEAGYV 569
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 183/412 (44%), Gaps = 42/412 (10%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C ++ + GKQ H Q G+ + + L+ Y+ +DA V + +
Sbjct: 85 ACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTY------PSVLKACGELLDCASGVE 166
W +I + N ++A+S ++ +L + D+ + SV+ AC +
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES 204
Query: 167 VHKAIEVGSMGWSLFVHNALVSMYAKFGK--LEVARHLFDNMPERDDVSWNTIISCYASR 224
+H + + V N L+ YAK G+ + VAR +FD + ++D VS+N+I+S YA
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 225 GTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMV 284
G EAF++F R+ V+ ++ +N + +
Sbjct: 265 GMSNEAFEVFRRL----VKNKVVTFNA-----------------------------ITLS 291
Query: 285 VGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK 344
L A SH GAL++GK IH +R G + V ++I MY +CG + A F RM+ K
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK 351
Query: 345 GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH 404
+ +W AM++G+ + LF M+ G PNY+T SVL C+ G +
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411
Query: 405 CYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR-DEVTYTAMI 455
+ R + L + +VD+ R+G + +A + + + D + +++++
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/638 (30%), Positives = 330/638 (51%), Gaps = 62/638 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C ++ L G QLHA + F + I+ + YA+ + DA I+ ++S +L
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N +I+ + + E +AL + +++ + DE + V +AC + + G++++
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
S+ + V NA + MY K C A EAF+
Sbjct: 410 KSSLSLDVCVANAAIDMYGK---------------------------CQA----LAEAFR 438
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGN-FKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
+F+ M+ + + WN + + G ++ +S +R+ I D L AC+
Sbjct: 439 VFDEMRRR----DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 494
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYML----FQR------M 341
G+L G EIH V++G +V +LI MYS+CG + A + FQR M
Sbjct: 495 G-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTM 553
Query: 342 EE----------KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLC 391
EE + ++WN+++SG+ ++ ++ LF +M+ G P+ T A+VL C
Sbjct: 554 EELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Query: 392 ARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTY 451
A +A+ GK+ H ++K+E + + + +TLVDMY++ G + +++ +F+ RRD VT+
Sbjct: 614 ANLASAGLGKQIHAQVIKKE-LQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTW 672
Query: 452 TAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVD 511
AMI GY G+G+ A+ +FE M IKP+HV +++L AC+H GL+ +G F M
Sbjct: 673 NAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 732
Query: 512 DYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTV-LG 570
DYG+ P++ HY+ M D+ G++G + +A E+I MP++ +W TL+G C IH N V +
Sbjct: 733 DYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVA 792
Query: 571 EWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGE 630
E A LL + P S Y L++N+YA AG W +++++R MR +KK PGC+WV++ E
Sbjct: 793 EEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDE 852
Query: 631 FSPFFVGDTSNPHAGEIYPLMDGLNELMK---DAGYIR 665
F VGD ++P EIY + + MK D+ ++R
Sbjct: 853 LHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVR 890
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 232/522 (44%), Gaps = 68/522 (13%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C +L GKQ HA +I GF T +L L+ Y F A +V + + + W
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 114 NMLIS-------MFVRNELF------------------------VEALSAYRKMLRKQVI 142
N +I+ MF N F ++++ + M R+ +
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 143 PDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHL 202
D T+ +LK C L D + G+++H + + +AL+ MYAK + + +
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 203 FDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNF 262
F +PE++ VSW+ II+ A K F+ MQ+ ++ I+ ++
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV---------- 287
Query: 263 KGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALI 322
L +C+ + L+LG ++H HA+++ F VR A +
Sbjct: 288 ------------------------LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 323
Query: 323 TMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYV 382
MY++C ++ A +LF E ++NAM++G++ + + LF +++ G + +
Sbjct: 324 DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 383
Query: 383 TIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDS 442
+++ V CA + L G + + +K + + N +DMY + + EA RVFD
Sbjct: 384 SLSGVFRACALVKGLSEGLQIYGLAIK-SSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 443 LTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQG 502
+ RRD V++ A+I + G+G L +F M + +I+PD ++L AC+ G + G
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYG 501
Query: 503 QVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
+ +V G+ + D++ + G++ +A++I +R
Sbjct: 502 MEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 198/444 (44%), Gaps = 16/444 (3%)
Query: 127 VEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNAL 186
V + S + L + + V K C + G + H + + + FV N L
Sbjct: 30 VPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCL 89
Query: 187 VSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
+ +Y A +FD MP RD VSWN +I+ Y+ +A F M ++
Sbjct: 90 LQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVR----DV 145
Query: 247 IIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGH 305
+ WN+M GYL G ++++ M R I D + L CS + LG +IHG
Sbjct: 146 VSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGI 205
Query: 306 AVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEV 365
VR G D +AL+ MY++ + +FQ + EK ++W+A+++G + +
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 366 SFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVD 425
F++M A + ASVL CA ++ L+ G + H + +K + F ++ +D
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD-FAADGIVRTATLD 324
Query: 426 MYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA 485
MYA+ + +A+ +FD+ + +Y AMI GY + G AL +F + + D ++
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384
Query: 486 MVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA----DLFGRAGLLNKAKEI 541
+ V AC+ +++G ++ I + C+A D++G+ L +A +
Sbjct: 385 LSGVFRACALVKGLSEGLQIY-----GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 439
Query: 542 ITRMPYKPTPAMWATLIGACRIHG 565
M + + W +I A +G
Sbjct: 440 FDEMRRRDAVS-WNAIIAAHEQNG 462
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 201/678 (29%), Positives = 339/678 (50%), Gaps = 75/678 (11%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C N+ S K LHA+++ QN + +LV+ Y A + + + W
Sbjct: 64 CTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAW 120
Query: 114 NMLISMFVRNELFVEALSAYRK-MLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAI 171
N++IS + R E + + ML + PD T+PSVLKAC ++D G ++H A+
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLAL 177
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ G M W ++V +L+ +Y+++ + AR LFD MP RD SWN +IS Y G EA
Sbjct: 178 KFGFM-WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 232 KLFERMQ-------------------------------EEGVEMNIIIWNTMAGGYLHAG 260
L ++ + G+E + + N + Y G
Sbjct: 237 TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 261 NFKG-------------------------------ALKLLSQMRTS-IHLDHVAMVVGLN 288
+ A+ L +MR S I D + ++ +
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLD-NVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
S +G ++ + + G +R G+ + D + NA++ MY++ G + A +F + +I
Sbjct: 357 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGA-EPNYVTIASVLPLCARIANLQHGKEFHCY 406
+WN ++SG+A E ++ M EG N T SVLP C++ L+ G + H
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM 466
++K + + ++ +L DMY + G++ +A +F + R + V + +I +G G G+
Sbjct: 477 LLKNGLYLDVFVV-TSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEK 535
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
A+ +F+EM +KPDH+ V +L+ACSHSGLV +GQ F+ M DYGI P ++HY CM
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMV 595
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSG 586
D++GRAG L A + I M +P ++W L+ ACR+HGN LG+ A+ L E++P+H G
Sbjct: 596 DMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVG 655
Query: 587 YYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGE 646
Y++L++NMYA+AG W + E+R+ G++K PG + ++V + F+ G+ ++P E
Sbjct: 656 YHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEE 715
Query: 647 IYPLMDGLNELMKDAGYI 664
+Y + L +K GY+
Sbjct: 716 MYRELTALQAKLKMIGYV 733
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 204/450 (45%), Gaps = 55/450 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + G +H+ I G + + +L+ YA F D V + + +
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFT---YPSVLKACGELLDCAS--GVEV 167
WN +I + NE + A+S +++M ++ PD T S+L G++ C S G +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 168 HKAIEVGSMGW---SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASR 224
K GW + + NA+V MYAK G ++ AR +F+ +P D +SWNTIIS YA
Sbjct: 376 RK-------GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 225 GTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMV 284
G EA +++ M+EEG I + V
Sbjct: 429 GFASEAIEMYNIMEEEG---------------------------------EIAANQGTWV 455
Query: 285 VGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK 344
L ACS GAL+ G ++HG ++ G + V +L MY +CG L A LF ++
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV 515
Query: 345 GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH 404
+ WN +++ ++ LF++ML EG +P+++T ++L C+ + G+
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ--W 573
Query: 405 CYIMKREQF--KEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMK 461
C+ M + + L + +VDMY R+G++ A + S++ + D + A++ +
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 462 GEGQMALNIFEEMCKFKIKPDHVAMVAVLT 491
G + E + F+++P+HV +L+
Sbjct: 634 GNVDLGKIASEHL--FEVEPEHVGYHVLLS 661
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/614 (31%), Positives = 314/614 (51%), Gaps = 43/614 (7%)
Query: 55 INVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWN 114
+ V+SL+ G+Q+H + LG D + L++ Y + F A V ++ S + + WN
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWN 385
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGEL---LDCASGVEVHKAI 171
+I+ +N L VEA+ + ++LR + PD++T SVLKA L L + V VH AI
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVH-AI 444
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
++ ++ S FV AL+ Y++ ++ EA
Sbjct: 445 KINNVSDS-FVSTALIDAYSRNRCMK-------------------------------EAE 472
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNAC 290
LFER +++ WN M GY + + LKL + M + D + C
Sbjct: 473 ILFERHN-----FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ A+ GK++H +A+++G+D+ V + ++ MY +CGD+ A F + + W
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 587
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
M+SG + +F QM G P+ TIA++ + + L+ G++ H +K
Sbjct: 588 TMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL 647
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
+ + +LVDMYA+ G + +A +F + + + AM+ G GEG+ L +
Sbjct: 648 NCTNDPFV-GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQL 706
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
F++M IKPD V + VL+ACSHSGLV++ + M DYGI P IEHY+C+AD G
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 531 RAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYIL 590
RAGL+ +A+ +I M + + +M+ TL+ ACR+ G+T G+ A KLLE++P S Y+L
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVL 826
Query: 591 IANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPL 650
++NMYAAA W E+ RT M+ VKK PG +W++V + F V D SN IY
Sbjct: 827 LSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRK 886
Query: 651 MDGLNELMKDAGYI 664
+ + +K GY+
Sbjct: 887 VKDMIRDIKQEGYV 900
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 151/604 (25%), Positives = 260/604 (43%), Gaps = 55/604 (9%)
Query: 55 INVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWN 114
I + L GK HA++++ + ++ L+S Y++ A V + + + WN
Sbjct: 50 ITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWN 109
Query: 115 MLISMFVRN-ELFVE----ALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK 169
+++ + ++ E VE A +R + + V T +LK C + H
Sbjct: 110 SILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHG 169
Query: 170 -AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
A ++G G FV ALV++Y KFGK++ + LF+ MP RD V WN ++ Y G
Sbjct: 170 YACKIGLDG-DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKE 228
Query: 229 EAFKLFERMQEEGVEMN----------------------------------IIIWNTMAG 254
EA L G+ N II N
Sbjct: 229 EAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLS 288
Query: 255 GYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDV 313
YLH+G + LK + M + + D V ++ L + +L LG+++H A++ G D+
Sbjct: 289 EYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL 348
Query: 314 LDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQML 373
+ V N+LI MY + G A +F M E+ LI+WN++++G A E LF Q+L
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 408
Query: 374 HEGAEPNYVTIASVLPLCARIAN-LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGK 432
G +P+ T+ SVL + + L K+ H + +K + + L+D Y+R+
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS-FVSTALIDAYSRNRC 467
Query: 433 VLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
+ EA+ +F+ D V + AM+ GY +G L +F M K + D + V
Sbjct: 468 MKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKT 526
Query: 493 CSHSGLVAQG-QVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTP 551
C + QG QV + Y + + + + D++ + G ++ A+ +P P
Sbjct: 527 CGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDD 583
Query: 552 AMWATLIGACRIHGNT--VLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRT 609
W T+I C +G ++ +L+ + PD IA + A+ C + L + R
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDE----FTIATLAKASSCLTALEQGRQ 639
Query: 610 YMRN 613
N
Sbjct: 640 IHAN 643
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 178 WSLFVHNALVSMYAKFGKLEVARHL-FDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
W F+ NA+ S GK AR L F+ PER + N +IS Y+ G+ A ++F++
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDK 99
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAG-----NFKGALKLLSQMRTSI-HLDHVAMVVGLNAC 290
M + +++ WN++ Y + N + A L +R + + + + L C
Sbjct: 100 MPDR----DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC 155
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
H G + + HG+A + G D + V AL+ +Y + G + +LF+ M + ++ WN
Sbjct: 156 LHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWN 215
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIA 395
ML + M +E L G PN +T L L ARI+
Sbjct: 216 LMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT----LRLLARIS 256
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 309/613 (50%), Gaps = 40/613 (6%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + L+ GK++H V+ G++ + ++ L++ Y + A ++ + + + W
Sbjct: 206 CGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISW 265
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +IS + N + E L + M V PD T SV+ AC L D G ++H +
Sbjct: 266 NAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVIT 325
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ V N+L MY + G+W EA KL
Sbjct: 326 TGFAVDISVCNSLTQMYL-------------------------------NAGSWREAEKL 354
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSH 292
F RM+ + +I+ W TM GY + A+ M + S+ D + + L+AC+
Sbjct: 355 FSRMERK----DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACAT 410
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+G L G E+H A++ V N LI MYS+C + A +F + K +I+W ++
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
++G +R E RQM +PN +T+ + L CARI L GKE H +++ R
Sbjct: 471 IAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVL-RTG 528
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
L N L+DMY R G++ A F+S ++D ++ ++ GY +G+G M + +F+
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFD 587
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
M K +++PD + +++L CS S +V QG + F +M +DYG+ P ++HYAC+ DL GRA
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRA 646
Query: 533 GLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIA 592
G L +A + I +MP P PA+W L+ ACRIH LGE +A + E+ GYYIL+
Sbjct: 647 GELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLC 706
Query: 593 NMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMD 652
N+YA G W E+A+VR M+ G+ GC+WV+V G+ F D +P EI +++
Sbjct: 707 NLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Query: 653 GLNELMKDAGYIR 665
G E M + G +
Sbjct: 767 GFYEKMSEVGLTK 779
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 211/445 (47%), Gaps = 52/445 (11%)
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH--NA 185
EA+ M +V DE + ++++ C G +V+ +I + SM SL V NA
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVY-SIALSSMS-SLGVELGNA 134
Query: 186 LVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
++M+ +FG L A ++F M ER N
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSER-----------------------------------N 159
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQMR--TSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
+ WN + GGY G F A+ L +M + D L C I L GKE+H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
H VR G+++ +V NALITMY +CGD+ A +LF RM + +I+WNAM+SG+
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 364 EVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTL 423
E LF M +P+ +T+ SV+ C + + + G++ H Y++ F + + N+L
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVIT-TGFAVDISVCNSL 338
Query: 424 VDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDH 483
MY +G EA+++F + R+D V++T MI GY A++ + M + +KPD
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDE 398
Query: 484 VAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA----DLFGRAGLLNKAK 539
+ + AVL+AC+ G + G L + I R+ Y +A +++ + ++KA
Sbjct: 399 ITVAAVLSACATLGDLDTGVELHK-----LAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 540 EIITRMPYKPTPAMWATLIGACRIH 564
+I +P K + W ++I R++
Sbjct: 454 DIFHNIPRKNVIS-WTSIIAGLRLN 477
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/646 (29%), Positives = 328/646 (50%), Gaps = 75/646 (11%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYA--RFNLFDDACIVTESSSSLEPL 111
C+++ L KQ H +I G + +L + A F + A V +
Sbjct: 40 CVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRK-QVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
WN LI + V ++ A+ M+ + Q P+++T+P ++KA E+ + G +H
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
++G +FV N+L I CY S G A
Sbjct: 157 AVKSAVGSDVFVANSL-------------------------------IHCYFSCGDLDSA 185
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNA 289
K+F ++E+ +++ WN+M G++ G+ AL+L +M + + HV MV L+A
Sbjct: 186 CKVFTTIKEK----DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 290 CSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
C+ I L+ G+++ + +V + NA++ MY++CG + A LF MEEK +TW
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 350 NAMLSGFAHMD-------------------------------RVDEVSFLFRQM-LHEGA 377
ML G+A + + +E +F ++ L +
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 378 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAK 437
+ N +T+ S L CA++ L+ G+ H YI K+ + + + L+ MY++ G + +++
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYI-KKHGIRMNFHVTSALIHMYSKCGDLEKSR 420
Query: 438 RVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSG 497
VF+S+ +RD ++AMI G M G G A+++F +M + +KP+ V V ACSH+G
Sbjct: 421 EVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTG 480
Query: 498 LVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATL 557
LV + + LF +M +YGI+P +HYAC+ D+ GR+G L KA + I MP P+ ++W L
Sbjct: 481 LVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGAL 540
Query: 558 IGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVK 617
+GAC+IH N L E A +LLE++P + G ++L++N+YA G W ++E+R +MR G+K
Sbjct: 541 LGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLK 600
Query: 618 KAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
K PGC+ +++ G F GD ++P + ++Y + + E +K GY
Sbjct: 601 KEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 307/604 (50%), Gaps = 38/604 (6%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+ +H V+ +GFD + L+ YA +A +V + + + + WN L++ FV
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
+ ++AL M+ + T+ S L AC G +H + V + ++ +
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
NALVSMY K G++ +R + MP RD
Sbjct: 383 GNALVSMYGKIGEMSESRRVLLQMPRRD-------------------------------- 410
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGAL-KLGK 300
++ WN + GGY + AL MR + +++ +V L+AC G L + GK
Sbjct: 411 ---VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 467
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
+H + V GF+ ++V+N+LITMY++CGDL + LF ++ + +ITWNAML+ AH
Sbjct: 468 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 527
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLW 420
+EV L +M G + + + L A++A L+ G++ H +K F+ ++
Sbjct: 528 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL-GFEHDSFIF 586
Query: 421 NTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIK 480
N DMY++ G++ E ++ R ++ +I G G + F EM + IK
Sbjct: 587 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 646
Query: 481 PDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKE 540
P HV V++LTACSH GLV +G + + D+G+ P IEH C+ DL GR+G L +A+
Sbjct: 647 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 706
Query: 541 IITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGC 600
I++MP KP +W +L+ +C+IHGN G AA L +++P+ Y+L +NM+A G
Sbjct: 707 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 766
Query: 601 WSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKD 660
W ++ VR M +KK C+WV + + S F +GD ++P EIY ++ + +L+K+
Sbjct: 767 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 826
Query: 661 AGYI 664
+GY+
Sbjct: 827 SGYV 830
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 225/512 (43%), Gaps = 54/512 (10%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G Q+H V G + + ++ Y + L + V E + W L+ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
E + Y+ M + V +E + V+ +CG L D + G ++ + + L V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
N+L+SM G ++ A ++FD M ERD +SWN+I + YA G E+F++F M+
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
E+N +T+ L+ H+ K G+ I
Sbjct: 241 EVNSTTVSTL----------------------------------LSVLGHVDHQKWGRGI 266
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
HG V+ GFD + V N L+ MY+ G A ++F++M K LI+WN++++ F + R
Sbjct: 267 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 326
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
+ L M+ G NYVT S L C + G+ H ++ F ++ N
Sbjct: 327 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ-IIGNA 385
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
LV MY + G++ E++RV + RRD V + A+I GY + AL F+ M + +
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445
Query: 483 HVAMVAVLTACSHSG-LVAQGQVLFQEMV------DDYGIIPRIEHYACMADLFGRAGLL 535
++ +V+VL+AC G L+ +G+ L +V D++ I YA DL L
Sbjct: 446 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 505
Query: 536 N--KAKEIITRMPYKPTPAMWATLIGACRIHG 565
N + IIT W ++ A HG
Sbjct: 506 NGLDNRNIIT----------WNAMLAANAHHG 527
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 216/451 (47%), Gaps = 38/451 (8%)
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDC-ASGVEVHK 169
+ WN ++S VR L++E + +RKM + P F S++ ACG GV+VH
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 170 AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGE 229
+ + ++V A++ +Y +G + +R +F+ MP+R+ VSW +++ Y+ +G E
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNA 289
+++ M+ EGV N +M + +++
Sbjct: 127 VIDIYKGMRGEGVGCN----------------------------------ENSMSLVISS 152
Query: 290 CSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
C + LG++I G V++G + V N+LI+M G++ +A +F +M E+ I+W
Sbjct: 153 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 212
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
N++ + +A ++E +F M E N T++++L + + + + G+ H ++K
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 272
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
F + + NTL+ MYA +G+ +EA VF + +D +++ +++ + G AL
Sbjct: 273 M-GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
+ M ++V + L AC +G++L +V +I A + ++
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMY 390
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGA 560
G+ G +++++ ++ +MP + A W LIG
Sbjct: 391 GKIGEMSESRRVLLQMPRRDVVA-WNALIGG 420
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/570 (23%), Positives = 243/570 (42%), Gaps = 56/570 (9%)
Query: 61 SPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMF 120
S G+Q+ QV+ G + + L+S D A + + S + + WN + + +
Sbjct: 160 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 219
Query: 121 VRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL 180
+N E+ + M R + T ++L G + G +H + +
Sbjct: 220 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 279
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
V N L+ MYA G+ A +F MP +D +SWN++++ + + G +A L M
Sbjct: 280 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 339
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGK 300
G +N +V L AC + G+
Sbjct: 340 GKSVN----------------------------------YVTFTSALAACFTPDFFEKGR 365
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
+HG V +G + NAL++MY + G++ + + +M + ++ WNA++ G+A +
Sbjct: 366 ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDE 425
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIAN-LQHGKEFHCYIMKREQFKEYLLL 419
D+ F+ M EG NY+T+ SVL C + L+ GK H YI+ F+ +
Sbjct: 426 DPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS-AGFESDEHV 484
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKI 479
N+L+ MYA+ G + ++ +F+ L R+ +T+ AM+ G G+ L + +M F +
Sbjct: 485 KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 544
Query: 480 KPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI--EH----YACMADLFGRAG 533
D + L+A + ++ +GQ L +G+ ++ EH + AD++ + G
Sbjct: 545 SLDQFSFSEGLSAAAKLAVLEEGQQL-------HGLAVKLGFEHDSFIFNAAADMYSKCG 597
Query: 534 LLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAG--KLLEM--KPDHSGYYI 589
+ + +++ + P+ W LI A HG E A ++LEM KP H +
Sbjct: 598 EIGEVVKMLPPSVNRSLPS-WNILISALGRHG--YFEEVCATFHEMLEMGIKPGHVTFVS 654
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKA 619
L+ LA R+ G++ A
Sbjct: 655 LLTACSHGGLVDKGLAYYDMIARDFGLEPA 684
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 195/439 (44%), Gaps = 40/439 (9%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + G+ LH V+ G N I+ LVS Y + ++ V + + W
Sbjct: 355 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 414
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC---GELLDCASGVEVHKA 170
N LI + +E +AL+A++ M + V + T SVL AC G+LL+ G +H
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE--RGKPLHAY 472
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
I V N+L++MYAK G L ++ LF+ + R+ ++WN +++ A G E
Sbjct: 473 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 532
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
KL +M+ GV LD + GL+A
Sbjct: 533 LKLVSKMRSFGVS----------------------------------LDQFSFSEGLSAA 558
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ + L+ G+++HG AV+ GF+ + NA MYS+CG++G + + L +WN
Sbjct: 559 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 618
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
++S +EV F +ML G +P +VT S+L C+ + G ++ I +
Sbjct: 619 ILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 678
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR-DEVTYTAMIRGYGMKGEGQMALN 469
+ + ++D+ RSG++ EA+ + + +++ + +++ + G
Sbjct: 679 FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 738
Query: 470 IFEEMCKFKIKPDHVAMVA 488
E + K + + D V +++
Sbjct: 739 AAENLSKLEPEDDSVYVLS 757
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 341 MEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANL-QH 399
M + ++WN M+SG + E FR+M G +P+ IAS++ C R ++ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 400 GKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYG 459
G + H ++ K + + + ++ +Y G V +++VF+ + R+ V++T+++ GY
Sbjct: 61 GVQVHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI 519
KGE + ++I++ M + + +M V+++C + G+ + ++V G+ ++
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKL 178
Query: 520 EHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGA 560
+ + G G ++ A I +M + T + W ++ A
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAA 218
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 307/604 (50%), Gaps = 38/604 (6%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+ +H V+ +GFD + L+ YA +A +V + + + + WN L++ FV
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
+ ++AL M+ + T+ S L AC G +H + V + ++ +
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
NALVSMY K G++ +R + MP RD
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMPRRD-------------------------------- 427
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGAL-KLGK 300
++ WN + GGY + AL MR + +++ +V L+AC G L + GK
Sbjct: 428 ---VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 484
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
+H + V GF+ ++V+N+LITMY++CGDL + LF ++ + +ITWNAML+ AH
Sbjct: 485 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 544
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLW 420
+EV L +M G + + + L A++A L+ G++ H +K F+ ++
Sbjct: 545 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL-GFEHDSFIF 603
Query: 421 NTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIK 480
N DMY++ G++ E ++ R ++ +I G G + F EM + IK
Sbjct: 604 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 663
Query: 481 PDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKE 540
P HV V++LTACSH GLV +G + + D+G+ P IEH C+ DL GR+G L +A+
Sbjct: 664 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 723
Query: 541 IITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGC 600
I++MP KP +W +L+ +C+IHGN G AA L +++P+ Y+L +NM+A G
Sbjct: 724 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 783
Query: 601 WSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKD 660
W ++ VR M +KK C+WV + + S F +GD ++P EIY ++ + +L+K+
Sbjct: 784 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 843
Query: 661 AGYI 664
+GY+
Sbjct: 844 SGYV 847
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 226/513 (44%), Gaps = 54/513 (10%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G Q+H V G + + ++ Y + L + V E + W L+ +
Sbjct: 78 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
E + Y+ M + V +E + V+ +CG L D + G ++ + + L V
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 197
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
N+L+SM G ++ A ++FD M ERD +SWN+I + YA G E+F++F M+
Sbjct: 198 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 257
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
E+N +T+ L+ H+ K G+ I
Sbjct: 258 EVNSTTVSTL----------------------------------LSVLGHVDHQKWGRGI 283
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
HG V+ GFD + V N L+ MY+ G A ++F++M K LI+WN++++ F + R
Sbjct: 284 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 343
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
+ L M+ G NYVT S L C + G+ H ++ F ++ N
Sbjct: 344 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ-IIGNA 402
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
LV MY + G++ E++RV + RRD V + A+I GY + AL F+ M + +
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 462
Query: 483 HVAMVAVLTACSHSG-LVAQGQVLFQEMV------DDYGIIPRIEHYACMADLFGRAGLL 535
++ +V+VL+AC G L+ +G+ L +V D++ I YA DL L
Sbjct: 463 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 522
Query: 536 N--KAKEIITRMPYKPTPAMWATLIGACRIHGN 566
N + IIT W ++ A HG+
Sbjct: 523 NGLDNRNIIT----------WNAMLAANAHHGH 545
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 216/451 (47%), Gaps = 38/451 (8%)
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDC-ASGVEVHK 169
+ WN ++S VR L++E + +RKM + P F S++ ACG GV+VH
Sbjct: 24 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 83
Query: 170 AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGE 229
+ + ++V A++ +Y +G + +R +F+ MP+R+ VSW +++ Y+ +G E
Sbjct: 84 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 143
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNA 289
+++ M+ EGV N +M + +++
Sbjct: 144 VIDIYKGMRGEGVGCN----------------------------------ENSMSLVISS 169
Query: 290 CSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
C + LG++I G V++G + V N+LI+M G++ +A +F +M E+ I+W
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 229
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
N++ + +A ++E +F M E N T++++L + + + + G+ H ++K
Sbjct: 230 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 289
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
F + + NTL+ MYA +G+ +EA VF + +D +++ +++ + G AL
Sbjct: 290 M-GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
+ M ++V + L AC +G++L +V +I A + ++
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMY 407
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGA 560
G+ G +++++ ++ +MP + A W LIG
Sbjct: 408 GKIGEMSESRRVLLQMPRRDVVA-WNALIGG 437
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/543 (23%), Positives = 235/543 (43%), Gaps = 56/543 (10%)
Query: 61 SPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMF 120
S G+Q+ QV+ G + + L+S D A + + S + + WN + + +
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 121 VRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL 180
+N E+ + M R + T ++L G + G +H + +
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
V N L+ MYA G+ A +F MP +D +SWN++++ + + G +A L M
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGK 300
G +N +V L AC + G+
Sbjct: 357 GKSVN----------------------------------YVTFTSALAACFTPDFFEKGR 382
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
+HG V +G + NAL++MY + G++ + + +M + ++ WNA++ G+A +
Sbjct: 383 ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDE 442
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIAN-LQHGKEFHCYIMKREQFKEYLLL 419
D+ F+ M EG NY+T+ SVL C + L+ GK H YI+ F+ +
Sbjct: 443 DPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS-AGFESDEHV 501
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKI 479
N+L+ MYA+ G + ++ +F+ L R+ +T+ AM+ G G+ L + +M F +
Sbjct: 502 KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 561
Query: 480 KPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI--EH----YACMADLFGRAG 533
D + L+A + ++ +GQ L +G+ ++ EH + AD++ + G
Sbjct: 562 SLDQFSFSEGLSAAAKLAVLEEGQQL-------HGLAVKLGFEHDSFIFNAAADMYSKCG 614
Query: 534 LLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAG--KLLEM--KPDHSGYYI 589
+ + +++ + P+ W LI A HG E A ++LEM KP H +
Sbjct: 615 EIGEVVKMLPPSVNRSLPS-WNILISALGRHG--YFEEVCATFHEMLEMGIKPGHVTFVS 671
Query: 590 LIA 592
L+
Sbjct: 672 LLT 674
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 195/439 (44%), Gaps = 40/439 (9%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + G+ LH V+ G N I+ LVS Y + ++ V + + W
Sbjct: 372 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 431
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC---GELLDCASGVEVHKA 170
N LI + +E +AL+A++ M + V + T SVL AC G+LL+ G +H
Sbjct: 432 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE--RGKPLHAY 489
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
I V N+L++MYAK G L ++ LF+ + R+ ++WN +++ A G E
Sbjct: 490 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 549
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
KL +M+ GV LD + GL+A
Sbjct: 550 LKLVSKMRSFGVS----------------------------------LDQFSFSEGLSAA 575
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ + L+ G+++HG AV+ GF+ + NA MYS+CG++G + + L +WN
Sbjct: 576 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 635
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
++S +EV F +ML G +P +VT S+L C+ + G ++ I +
Sbjct: 636 ILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 695
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR-DEVTYTAMIRGYGMKGEGQMALN 469
+ + ++D+ RSG++ EA+ + + +++ + +++ + G
Sbjct: 696 FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 755
Query: 470 IFEEMCKFKIKPDHVAMVA 488
E + K + + D V +++
Sbjct: 756 AAENLSKLEPEDDSVYVLS 774
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 67/134 (50%)
Query: 426 MYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA 485
MY + G+V A+ +FD + R+EV++ M+ G G + F +MC IKP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 486 MVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
+ +++TAC SG + + V V G++ + + L+G GL++ ++++ M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 546 PYKPTPAMWATLIG 559
P + + + ++G
Sbjct: 121 PDRNVVSWTSLMVG 134
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 303/603 (50%), Gaps = 41/603 (6%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G Q+H V+ G D+ + L++ Y + A I+ + + + WN +IS +
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
N L +EAL + M V E ++ SV+K C L + ++H ++ + +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
AL+ Y+K C A +A +LF +E G
Sbjct: 333 RTALMVAYSK---------------------------CTAML----DALRLF---KEIGC 358
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKE 301
N++ W M G+L + A+ L S+M R + + V L A I E
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SE 414
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
+H V+T ++ V AL+ Y + G + A +F +++K ++ W+AML+G+A
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARI-ANLQHGKEFHCYIMKREQFKEYLLLW 420
+ +F ++ G +PN T +S+L +CA A++ GK+FH + +K + L +
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK-SRLDSSLCVS 533
Query: 421 NTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIK 480
+ L+ MYA+ G + A+ VF +D V++ +MI GY G+ AL++F+EM K K+K
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593
Query: 481 PDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKE 540
D V + V AC+H+GLV +G+ F MV D I P EH +CM DL+ RAG L KA +
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 653
Query: 541 IITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGC 600
+I MP +W T++ ACR+H T LG AA K++ MKP+ S Y+L++NMYA +G
Sbjct: 654 VIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 713
Query: 601 WSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKD 660
W E A+VR M VKK PG +W++V + F GD S+P +IY ++ L+ +KD
Sbjct: 714 WQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKD 773
Query: 661 AGY 663
GY
Sbjct: 774 LGY 776
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/514 (26%), Positives = 239/514 (46%), Gaps = 55/514 (10%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+QLH Q I GF + + LV Y + + F D V + + W LIS + R
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
N + E L+ + +M + P+ FT+ + L E G++VH + + ++ V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
N+L+++Y K G + AR LFD + V+WN++IS YA+ G EA +F M+
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR---- 287
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
+N + L +F +KL C+++ L+ +++
Sbjct: 288 -LNYV--------RLSESSFASVIKL---------------------CANLKELRFTEQL 317
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG-LITWNAMLSGFAHMDR 361
H V+ GF N+R AL+ YS+C + A LF+ + G +++W AM+SGF D
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 362 VDEVSFLFRQMLHEGAEPN---YVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL 418
+E LF +M +G PN Y I + LP+ + E H ++K ++
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS-------PSEVHAQVVK-TNYERSST 429
Query: 419 LWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFK 478
+ L+D Y + GKV EA +VF + +D V ++AM+ GY GE + A+ +F E+ K
Sbjct: 430 VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 479 IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMAD----LFGRAGL 534
IKP+ ++L C+ + + GQ + + I R++ C++ ++ + G
Sbjct: 490 IKPNEFTFSSILNVCAATN-ASMGQ---GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGN 545
Query: 535 LNKAKEIITRMPYKPTPAMWATLIGACRIHGNTV 568
+ A+E+ R K + W ++I HG +
Sbjct: 546 IESAEEVFKRQREKDLVS-WNSMISGYAQHGQAM 578
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 191/393 (48%), Gaps = 42/393 (10%)
Query: 54 CINVNSLSPGKQLHAQVISLG--FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL 111
C N+ L +QLH V+ G FDQN I +V++ + D + E +
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQN-IRTALMVAYSKCTAMLDALRLFKEIGCVGNVV 363
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
W +IS F++N+ EA+ + +M RK V P+EFTY +L A L S EVH +
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQV 419
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ S V AL+ Y K GK+E A +F + ++D V+W+ +++ YA G A
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
K+F + + G++ N ++++ LN C+
Sbjct: 480 KMFGELTKGGIKPNEFTFSSI----------------------------------LNVCA 505
Query: 292 HIGA-LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
A + GK+ HG A+++ D V +AL+TMY++ G++ A +F+R EK L++WN
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWN 565
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
+M+SG+A + + +F++M + + VT V C ++ G+++ +++
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
+ + +VD+Y+R+G++ +A +V +++
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 131/299 (43%), Gaps = 38/299 (12%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISM 119
+SP ++HAQV+ +++++ + L+ Y + ++A V + + W+ +++
Sbjct: 410 ISPS-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 468
Query: 120 FVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGEL-LDCASGVEVHKAIEVGSMGW 178
+ + A+ + ++ + + P+EFT+ S+L C G + H +
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQ 238
SL V +AL++MYAK G +E A +F E+D VSWN++IS YA G +A +F+ M+
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 239 EEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKL 298
+ V+M D V + AC+H G ++
Sbjct: 589 KRKVKM----------------------------------DGVTFIGVFAACTHAGLVEE 614
Query: 299 GKEIHGHAVRTGFDVLDNVRNA-LITMYSRCGDLGHAYMLFQRMEEK-GLITWNAMLSG 355
G++ VR N+ ++ +YSR G L A + + M G W +L+
Sbjct: 615 GEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 3/235 (1%)
Query: 331 LGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPL 390
L +A+ LF + + ++ ++L GF+ R E LF + G E + +SVL +
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 391 CARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVT 450
A + + G++ HC +K F + + + +LVD Y + + ++VFD + R+ VT
Sbjct: 103 SATLCDELFGRQLHCQCIKF-GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 451 YTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV 510
+T +I GY L +F M +P+ A L + G+ +G + +V
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 511 DDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHG 565
+ G+ I + +L+ + G + KA+ + + K W ++I +G
Sbjct: 222 KN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV-VTWNSMISGYAANG 274
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 23/179 (12%)
Query: 54 CINVN-SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C N S+ GKQ H I D + + L++ YA+ + A V + + +
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN +IS + ++ ++AL +++M +++V D T+ V AC +G+ +E
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH-----AGL-----VE 613
Query: 173 VGSMGWSLFV----------HNA-LVSMYAKFGKLEVARHLFDNMPERDDVS-WNTIIS 219
G + + V HN+ +V +Y++ G+LE A + +NMP + W TI++
Sbjct: 614 EGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILA 672
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 186/618 (30%), Positives = 321/618 (51%), Gaps = 51/618 (8%)
Query: 53 GCINVNSLSPGKQLHAQV---ISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLE 109
C + ++ G+ +H V ++LG D + L+ Y + +A + + +
Sbjct: 69 ACGELREVNYGEMIHGFVKKDVTLGSD--LYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 110 PLHWNMLISMFVRNELFVEALSAYRKM-LRKQVIPDEFTYPSVLKACGELLDCASGVEVH 168
+ W+ ++S F +N +A+ +R+M + V PD T +++ AC +L + G VH
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+ L + N+L++ YAK + A +LF + E+D +SW+T+I+CY G
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN 288
EA +F M ++G E N+ ++ L
Sbjct: 247 EALLVFNDMMDDGTEPNV----------------------------------ATVLCVLQ 272
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
AC+ L+ G++ H A+R G + V AL+ MY +C AY +F R+ K +++
Sbjct: 273 ACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVS 332
Query: 349 WNAMLSGF-----AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
W A++SGF AH ++E S + +L P+ + + VL C+ + L+ K F
Sbjct: 333 WVALISGFTLNGMAHRS-IEEFSIM---LLENNTRPDAILMVKVLGSCSELGFLEQAKCF 388
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGE 463
H Y++K F + +LV++Y+R G + A +VF+ + +D V +T++I GYG+ G+
Sbjct: 389 HSYVIKY-GFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGK 447
Query: 464 GQMALNIFEEMCK-FKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHY 522
G AL F M K ++KP+ V +++L+ACSH+GL+ +G +F+ MV+DY + P +EHY
Sbjct: 448 GTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHY 507
Query: 523 ACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKP 582
A + DL GR G L+ A EI RMP+ PTP + TL+GACRIH N + E A KL E++
Sbjct: 508 AVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELES 567
Query: 583 DHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNP 642
+H+GYY+L++N+Y G W + ++R ++ G+KK + +++ + F D +P
Sbjct: 568 NHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHP 627
Query: 643 HAGEIYPLMDGLNELMKD 660
+Y L+ L+ MK+
Sbjct: 628 EKEPVYGLLKELDLHMKE 645
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 168/378 (44%), Gaps = 43/378 (11%)
Query: 192 KFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNT 251
KF AR +F M +R WNT++ + W E F M
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHM-------------- 51
Query: 252 MAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHA---VR 308
R D+ + V L AC + + G+ IHG V
Sbjct: 52 --------------------FRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVT 91
Query: 309 TGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF-AHMDRVDEVSF 367
G D+ V ++LI MY +CG + A +F +E+ ++TW++M+SGF + V F
Sbjct: 92 LGSDLY--VGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEF 149
Query: 368 LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMY 427
R ++ P+ VT+ +++ C +++N + G+ H ++++R F L L N+L++ Y
Sbjct: 150 FRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR-GFSNDLSLVNSLLNCY 208
Query: 428 ARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMV 487
A+S EA +F + +D ++++ +I Y G AL +F +M +P+ ++
Sbjct: 209 AKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVL 268
Query: 488 AVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY 547
VL AC+ + + QG+ E+ G+ ++ + D++ + +A + +R+P
Sbjct: 269 CVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR 327
Query: 548 KPTPAMWATLIGACRIHG 565
K + W LI ++G
Sbjct: 328 KDVVS-WVALISGFTLNG 344
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 319/636 (50%), Gaps = 74/636 (11%)
Query: 63 GKQLHAQVISLGFDQNTIML-PRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFV 121
G+Q+H+ V+ + Q + + LVSFY R ++A + S + + WN++I+ +
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 122 RNELFVEALSAYRKMLRK-QVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS-MGWS 179
N + +A + ++ K V PD T S+L C +L D ASG E+H I S +
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
V NAL+S YA+FG A F M +D +SWN I+ +A
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADS--------------- 410
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLG 299
F+ L + +I LD V ++ L C ++ +
Sbjct: 411 -------------------PKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV 451
Query: 300 KEIHGHAVRTGF---DVLDNVRNALITMYSRCGDLGHAYMLFQRM-EEKGLITWNAMLSG 355
KE+HG++V+ G + + NAL+ Y++CG++ +A+ +F + E + L+++N++LSG
Sbjct: 452 KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
Query: 356 FAHMDRVDEVSFLF-------------------------------RQMLHEGAEPNYVTI 384
+ + D+ LF R++ G PN VTI
Sbjct: 512 YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTI 571
Query: 385 ASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT 444
++LP+CA++A+L ++ H YI++ + L TL+D+YA+ G + A VF S
Sbjct: 572 MNLLPVCAQLASLHLVRQCHGYIIRGGLGD--IRLKGTLLDVYAKCGSLKHAYSVFQSDA 629
Query: 445 RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQV 504
RRD V +TAM+ GY + G G+ AL I+ M + IKPDHV + +LTAC H+GL+ G
Sbjct: 630 RRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQ 689
Query: 505 LFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIH 564
++ + +G+ P +E YAC DL R G L+ A +T+MP +P +W TL+ AC +
Sbjct: 690 IYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTY 749
Query: 565 GNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAW 624
LG A LL+ + D +G ++LI+NMYAA W + E+R M+ +KK GC+W
Sbjct: 750 NRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSW 809
Query: 625 VDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKD 660
++V G+ + F GD S+P I+ L++ L MK+
Sbjct: 810 LEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 211/430 (49%), Gaps = 42/430 (9%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFN-LFDDACIVTESSSSLEPLH 112
C+ + GK +H+ +I G +++T++ LVS YA+F +F DA + + + +
Sbjct: 132 CVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVS 191
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGEL---LDCASGVEVHK 169
WN +I+ F N + +A ++ ML++ P+ T +VL C + + C SG ++H
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHS 251
Query: 170 -AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
++ + +FV N+LVS Y + G++E A LF M +D VSWN +I+ YAS W
Sbjct: 252 YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWF 311
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN 288
+AF+LF + +G + D V ++ L
Sbjct: 312 KAFQLFHNLVHKG---------------------------------DVSPDSVTIISILP 338
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLD-NVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
C+ + L GKEIH + +R + + D +V NALI+ Y+R GD AY F M K +I
Sbjct: 339 VCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDII 398
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
+WNA+L FA + + L +L+E + VTI S+L C + + KE H Y
Sbjct: 399 SWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYS 458
Query: 408 MKREQF--KEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEG 464
+K +E L N L+D YA+ G V A ++F L+ RR V+Y +++ GY G
Sbjct: 459 VKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSH 518
Query: 465 QMALNIFEEM 474
A +F EM
Sbjct: 519 DDAQMLFTEM 528
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 198/418 (47%), Gaps = 50/418 (11%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C +V+ L+ G+ LH V LG + + +++ YA+ DD + SL+P+
Sbjct: 30 ACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVV 89
Query: 113 WNMLISMFVRNELFVEALSAYRKMLR--------KQVIPDEFTYPSVLKACGELLDCASG 164
WN++++ ++S R+ +R + P T+ VL C L D +G
Sbjct: 90 WNIVLTGL--------SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 165 VEVHKAIEVGSMGWSLFVHNALVSMYAKFGKL-EVARHLFDNMPERDDVSWNTIISCYAS 223
+H I + V NALVSMYAKFG + A FD + ++D VSWN II+ ++
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 224 RGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAM 283
+AF+ F M +E E N + T+A L + + M +I
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPN---YATIA----------NVLPVCASMDKNI------- 241
Query: 284 VVGLNACSHIGALKLGKEIHGHAV-RTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME 342
A + G++IH + V R+ V N+L++ Y R G + A LF RM
Sbjct: 242 -----------ACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG 290
Query: 343 EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGK 401
K L++WN +++G+A + LF ++H+G P+ VTI S+LP+CA++ +L GK
Sbjct: 291 SKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGK 350
Query: 402 EFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYG 459
E H YI++ E + N L+ YAR G A F ++ +D +++ A++ +
Sbjct: 351 EIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 203/436 (46%), Gaps = 20/436 (4%)
Query: 11 NFVYHGHLSNA--FKSF--LHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQL 66
N V G+ SN FK+F H H SP C + L+ GK++
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPD-----SVTIISILPVCAQLTDLASGKEI 352
Query: 67 HAQVISLGF-DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNEL 125
H+ ++ + ++T + L+SFYARF A S+ + + WN ++ F +
Sbjct: 353 HSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPK 412
Query: 126 FVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AIEVGSM--GWSLFV 182
+ L+ +L + + D T S+LK C + EVH +++ G + +
Sbjct: 413 QFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKL 472
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDD-VSWNTIISCYASRGTWGEAFKLFERMQEEG 241
NAL+ YAK G +E A +F + ER VS+N+++S Y + G+ +A LF M
Sbjct: 473 GNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTT- 531
Query: 242 VEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNACSHIGALKLGK 300
++ W+ M Y + A+ + +++ + + V ++ L C+ + +L L +
Sbjct: 532 ---DLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVR 588
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
+ HG+ +R G + ++ L+ +Y++CG L HAY +FQ + L+ + AM++G+A
Sbjct: 589 QCHGYIIRGGLGDI-RLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHG 647
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLW 420
R E ++ M +P++V I ++L C +Q G + + I K + +
Sbjct: 648 RGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQY 707
Query: 421 NTLVDMYARSGKVLEA 436
VD+ AR G++ +A
Sbjct: 708 ACAVDLIARGGRLDDA 723
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 135/295 (45%), Gaps = 15/295 (5%)
Query: 261 NFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNA 320
F +LLS T DH + + AC+ + L G+ +HG + G V +
Sbjct: 6 QFVQNFRLLSGFGT----DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKS 61
Query: 321 LITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN 380
++ MY++C + +F++M+ + WN +L+G + + + F + +P+
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPS 121
Query: 381 YVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVL-EAKRV 439
VT A VLPLC R+ + +GK H YI+K K+ L+ N LV MYA+ G + +A
Sbjct: 122 SVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKD-TLVGNALVSMYAKFGFIFPDAYTA 180
Query: 440 FDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC---KFKIKPDHVAMVAVLTACS-- 494
FD + +D V++ A+I G+ E M + F C K +P++ + VL C+
Sbjct: 181 FDGIADKDVVSWNAIIAGF---SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 495 -HSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYK 548
+ G+ + +V + + + + R G + +A + TRM K
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK 292
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 299/591 (50%), Gaps = 52/591 (8%)
Query: 86 VSFYARFNLFDDACIVTESSSSLE-----PLHWNMLISMFVRNELFVEALSAYRKMLRKQ 140
V+F R L +C V ++ S+ + N LI + +A+ ++L ++
Sbjct: 17 VNFLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAI----RVLSQE 72
Query: 141 VIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVAR 200
P + TY ++ CG + + VH+ I F+ L+ MY+ G ++ AR
Sbjct: 73 SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132
Query: 201 HLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAG 260
+FD +R I +WN + AG
Sbjct: 133 KVFDKTRKR-----------------------------------TIYVWNALFRALTLAG 157
Query: 261 NFKGALKLLSQM-RTSIHLDHVAMVVGLNAC----SHIGALKLGKEIHGHAVRTGFDVLD 315
+ + L L +M R + D L AC + L GKEIH H R G+
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 316 NVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHE 375
+ L+ MY+R G + +A +F M + +++W+AM++ +A + E FR+M+ E
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 376 --GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKV 433
+ PN VT+ SVL CA +A L+ GK H YI++R L + + LV MY R GK+
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR-GLDSILPVISALVTMYGRCGKL 336
Query: 434 LEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTAC 493
+RVFD + RD V++ ++I YG+ G G+ A+ IFEEM P V V+VL AC
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 494 SHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAM 553
SH GLV +G+ LF+ M D+GI P+IEHYACM DL GRA L++A +++ M +P P +
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 554 WATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRN 613
W +L+G+CRIHGN L E A+ +L ++P ++G Y+L+A++YA A W E+ V+ + +
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516
Query: 614 LGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
G++K PG W++V + F D NP +I+ + L E MK+ GYI
Sbjct: 517 RGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYI 567
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 181/395 (45%), Gaps = 38/395 (9%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + +SLS ++H ++ G DQ+ + +L+ Y+ D A V + + W
Sbjct: 87 CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCA-----SGVEVH 168
N L E L Y KM R V D FTY VLKAC +C G E+H
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA-SECTVNHLMKGKEIH 205
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+ +++ LV MYA+FG ++ A ++F MP R+ VSW+ +I+CYA G
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN 288
EA + F M E + + + V MV L
Sbjct: 266 EALRTFREMMRETKDSSP--------------------------------NSVTMVSVLQ 293
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
AC+ + AL+ GK IHG+ +R G D + V +AL+TMY RCG L +F RM ++ +++
Sbjct: 294 ACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVS 353
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
WN+++S + + +F +ML GA P VT SVL C+ ++ GK +
Sbjct: 354 WNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMW 413
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
+ K + + +VD+ R+ ++ EA ++ +
Sbjct: 414 RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 311/602 (51%), Gaps = 41/602 (6%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+Q+H V+ +G + + L+S Y++ + +A V WN +++ +
Sbjct: 291 GRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE 350
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
N+ AL + M +K V+PD FT +V+ C L G VH + + + +
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI 410
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
+AL+++Y+K G C +A+ +F+ M+E+
Sbjct: 411 ESALLTLYSKCG-------------------------CDP------DAYLVFKSMEEK-- 437
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT---SIHLDHVAMVVGLNACSHIGALKLG 299
+++ W ++ G G FK ALK+ M+ S+ D M NAC+ + AL+ G
Sbjct: 438 --DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 300 KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHM 359
++HG ++TG + V ++LI +YS+CG A +F M + ++ WN+M+S ++
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSR- 554
Query: 360 DRVDEVSF-LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL 418
+ + E+S LF ML +G P+ V+I SVL + A+L GK H Y + R
Sbjct: 555 NNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL-RLGIPSDTH 613
Query: 419 LWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFK 478
L N L+DMY + G A+ +F + + +T+ MI GYG G+ AL++F+EM K
Sbjct: 614 LKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAG 673
Query: 479 IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKA 538
PD V +++++AC+HSG V +G+ +F+ M DYGI P +EHYA M DL GRAGLL +A
Sbjct: 674 ESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA 733
Query: 539 KEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAA 598
I MP + ++W L+ A R H N LG +A KLL M+P+ Y+ + N+Y A
Sbjct: 734 YSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEA 793
Query: 599 GCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELM 658
G +E A++ M+ G+ K PGC+W++V + FF G +S+P EI+ +++ L M
Sbjct: 794 GLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Query: 659 KD 660
D
Sbjct: 854 VD 855
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 133/526 (25%), Positives = 238/526 (45%), Gaps = 50/526 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIV----TESSSSL 108
C + +LS GK +H V+ LG+ + + LV+ Y + D A V ++S S +
Sbjct: 69 ACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGV 128
Query: 109 EPLH---WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKA-CGE-LLDCAS 163
WN +I + + F E + +R+ML V PD F+ V+ C E
Sbjct: 129 SARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE 188
Query: 164 GVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYAS 223
G ++H + S+ F+ AL+ MY KFG L +
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFG-LSI------------------------- 222
Query: 224 RGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKL-LSQMRTSIHLDHVA 282
+A+++F ++++ N+++WN M G+ +G + +L L + S+ L +
Sbjct: 223 -----DAWRVFVEIEDKS---NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274
Query: 283 MVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME 342
L ACS G++IH V+ G V +L++MYS+CG +G A +F +
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 343 EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKE 402
+K L WNAM++ +A D LF M + P+ T+++V+ C+ + +GK
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKG 462
H + KR + + + L+ +Y++ G +A VF S+ +D V + ++I G G
Sbjct: 395 VHAELFKR-PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNG 453
Query: 463 EGQMALNIFEEMC--KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIE 520
+ + AL +F +M +KPD M +V AC+ + G + M+ G++ +
Sbjct: 454 KFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVF 512
Query: 521 HYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN 566
+ + DL+ + GL A ++ T M + A W ++I +C N
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMSTENMVA-WNSMI-SCYSRNN 556
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 203/493 (41%), Gaps = 64/493 (12%)
Query: 91 RFNLFD-----DACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVI-PD 144
RF L D C V +S + P N I ++ +++AL Y K
Sbjct: 2 RFKLHDVHIRRGLCCVADSY--ISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTS 59
Query: 145 EFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL--FVHNALVSMYAKFGKLEVARHL 202
FT+PS+LKAC L + + G +H ++ V +GW F+ +LV+MY K G L+ A +
Sbjct: 60 VFTFPSLLKACSALTNLSYGKTIHGSVVV--LGWRYDPFIATSLVNMYVKCGFLDYAVQV 117
Query: 203 FDNMPE-------RDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGG 255
FD + RD WN++I Y + E F RM GV + + +
Sbjct: 118 FDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV 177
Query: 256 YLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLD 315
GNF+ + GK+IHG +R D
Sbjct: 178 MCKEGNFR--------------------------------REEGKQIHGFMLRNSLDTDS 205
Query: 316 NVRNALITMYSRCGDLGHAYMLFQRMEEKG-LITWNAMLSGFAHMDRVDEVSFLFRQMLH 374
++ ALI MY + G A+ +F +E+K ++ WN M+ GF + L+ +
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 375 EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVL 434
+ + L C++ N G++ HC ++K + + +L+ MY++ G V
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC-TSLLSMYSKCGMVG 324
Query: 435 EAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
EA+ VF + + + AM+ Y G AL++F M + + PD + V++ CS
Sbjct: 325 EAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCS 384
Query: 495 HSGLVAQGQV----LFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPT 550
GL G+ LF+ + I + + L+ + G A + M K
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIE-----SALLTLYSKCGCDPDAYLVFKSMEEKDM 439
Query: 551 PAMWATLI-GACR 562
A W +LI G C+
Sbjct: 440 VA-WGSLISGLCK 451
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 4/239 (1%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + +L G Q+H +I G N + L+ Y++ L + A V S S+ +
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN +IS + RN L ++ + ML + + PD + SVL A G +H
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ + NAL+ MY K G + A ++F M + ++WN +I Y S G A
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSI----HLDHVAMVVGL 287
LF+ M++ G + + + ++ H+G + + M+ +++H A +V L
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDL 723
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 320/619 (51%), Gaps = 46/619 (7%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C G Q+H ++ G N I L+ Y + A V +S + W
Sbjct: 16 CTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSW 75
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
+ L+S V N +LS + +M R+ + P+EFT+ + LKACG L G+++H
Sbjct: 76 SALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL- 134
Query: 174 GSMGWSLFVH--NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+G+ + V N+LV MY+K G++ EA
Sbjct: 135 -KIGFEMMVEVGNSLVDMYSKCGRIN-------------------------------EAE 162
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS---IHLDHVAMVVGLN 288
K+F R+ V+ ++I WN M G++HAG AL M+ + D + L
Sbjct: 163 KVFRRI----VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDN--VRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
ACS G + GK+IHG VR+GF + + +L+ +Y +CG L A F +++EK +
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
I+W++++ G+A E LF+++ ++ + ++S++ + A A L+ GK+
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM 466
+K E +L N++VDMY + G V EA++ F + +D +++T +I GYG G G+
Sbjct: 339 AVKLPSGLETSVL-NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 397
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
++ IF EM + I+PD V +AVL+ACSHSG++ +G+ LF ++++ +GI PR+EHYAC+
Sbjct: 398 SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 457
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSG 586
DL GRAG L +AK +I MP KP +W TL+ CR+HG+ LG+ LL + +
Sbjct: 458 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPA 517
Query: 587 YYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGE 646
Y++++N+Y AG W+E R G+KK G +WV++ E F G+ S+P
Sbjct: 518 NYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPV 577
Query: 647 IY-PLMDGLNELMKDAGYI 664
I L + L ++ GY+
Sbjct: 578 IQETLKEAERRLREELGYV 596
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 144/279 (51%), Gaps = 5/279 (1%)
Query: 283 MVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME 342
+V L C+ G G ++H + +++G + N LI MY +C + AY +F M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 343 EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKE 402
E+ +++W+A++SG + LF +M +G PN T ++ L C + L+ G +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKG 462
H + +K F+ + + N+LVDMY++ G++ EA++VF + R +++ AMI G+ G
Sbjct: 129 IHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 463 EGQMALNIFEEMCKFKIK--PDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIE 520
G AL+ F M + IK PD + ++L ACS +G++ G+ + +V P
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 521 HY-ACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
+ DL+ + G L A++ ++ K T W++LI
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEK-TMISWSSLI 285
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 305/578 (52%), Gaps = 45/578 (7%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNML 116
+ S+ G +H +++ F ++ + L++ Y F + A V + + + + WN +
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSM 176
IS + RN +AL + M+ + V D T S+L CG L D G VHK +E +
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
G + V NALV+MY K G+++ AR + F+R
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFV-------------------------------FDR 278
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGA 295
M+ ++I W M GY G+ + AL+L M+ + + V + ++ C
Sbjct: 279 MERR----DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALK 334
Query: 296 LKLGKEIHGHAVRTGF--DVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
+ GK +HG AVR D++ + +LI+MY++C + + +F + W+A++
Sbjct: 335 VNDGKCLHGWAVRQQVYSDII--IETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAII 392
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
+G + V + LF++M E EPN T+ S+LP A +A+L+ HCY+ K F
Sbjct: 393 AGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK-TGF 451
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALN 469
L LV +Y++ G + A ++F+ + + D V + A+I GYGM G+G AL
Sbjct: 452 MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQ 511
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
+F EM + + P+ + + L ACSHSGLV +G LF+ M++ Y + R HY C+ DL
Sbjct: 512 VFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLL 571
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
GRAG L++A +IT +P++PT +W L+ AC H N LGE AA KL E++P+++G Y+
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYV 631
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDV 627
L+AN+YAA G W ++ +VR+ M N+G++K PG + +++
Sbjct: 632 LLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/523 (28%), Positives = 249/523 (47%), Gaps = 58/523 (11%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSF-------YARFNLFDDACIVTESSSSLE 109
S+S K LH VI+ G I+ V++ YAR LF++ SSL
Sbjct: 28 TQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYAR-KLFEEM-----PQSSL- 80
Query: 110 PLHWNMLISMFVRNELFVEALSAYRKMLRKQV--IPDEFTYPSVLKACGELLDCASGVEV 167
L +N++I M+VR L+ +A+S + +M+ + V +PD +TYP V KA GEL G+ V
Sbjct: 81 -LSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVV 139
Query: 168 HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW 227
H I G +V NAL++MY FGK+E+AR +FD M RD +SWNT+IS Y G
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYM 199
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGL 287
+A +F+ M E S+ LDH +V L
Sbjct: 200 NDALMMFDWMVNE----------------------------------SVDLDHATIVSML 225
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
C H+ L++G+ +H V+NAL+ MY +CG + A +F RME + +I
Sbjct: 226 PVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVI 285
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
TW M++G+ V+ L R M EG PN VTIAS++ +C + GK H +
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
++++ + + +++ +L+ MYA+ +V RVF ++ ++A+I G A
Sbjct: 346 VRQQVYSD-IIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDA 404
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVL-FQEMVDDYGIIPRIEHYACMA 526
L +F+ M + ++P+ + ++L A ++ L Q + + G + ++ +
Sbjct: 405 LGLFKRMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 527 DLFGRAGLLNKAKEIITRMPYK---PTPAMWATLIGACRIHGN 566
++ + G L A +I + K +W LI +HG+
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 8/242 (3%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + ++ GK LH + + I+ L+S YA+ D V +S W
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPW 388
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
+ +I+ V+NEL +AL +++M R+ V P+ T S+L A L D + +H +
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPE----RDDVSWNTIISCYASRGTWGE 229
SL LV +Y+K G LE A +F+ + E +D V W +IS Y G
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKL----LSQMRTSIHLDHVAMVV 285
A ++F M GV N I + + H+G + L L L +T +H +V
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIV 568
Query: 286 GL 287
L
Sbjct: 569 DL 570
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/604 (32%), Positives = 303/604 (50%), Gaps = 37/604 (6%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + L GKQ+HA ++ G + + ++ L+ Y + A + + +
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W L+S + +N L EA+ + M + + PD + S+L +C L G +VH
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
++G +V N+L+ MYAK L AR +FD D V +N +I Y+ GT E
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWE--- 434
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACS 291
LH AL + MR I + V L A +
Sbjct: 435 ------------------------LHE-----ALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
+ +L L K+IHG + G ++ +ALI +YS C L + ++F M+ K L+ WN+
Sbjct: 466 SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
M +G+ +E LF ++ P+ T A+++ +A++Q G+EFHC ++KR
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 412 -QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
+ Y+ N L+DMYA+ G +A + FDS RD V + ++I Y GEG+ AL +
Sbjct: 586 LECNPYIT--NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQM 643
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
E+M I+P+++ V VL+ACSH+GLV G F+ M+ +GI P EHY CM L G
Sbjct: 644 LEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLG 702
Query: 531 RAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYIL 590
RAG LNKA+E+I +MP KP +W +L+ C GN L E AA + P SG + +
Sbjct: 703 RAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTM 762
Query: 591 IANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPL 650
++N+YA+ G W+E +VR M+ GV K PG +W+ + E F D S+ A +IY +
Sbjct: 763 LSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEV 822
Query: 651 MDGL 654
+D L
Sbjct: 823 LDDL 826
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 138/544 (25%), Positives = 240/544 (44%), Gaps = 53/544 (9%)
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNEL 125
+H Q+I G + +T + L++ Y+R A V E + W+ ++S + +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 126 FVEALSAYRKMLR-KQVIPDEFTYPSVLKACGELLDCASGV--EVHKAIEVGSMGWSLFV 182
+ E+L + + R ++ P+E+ S ++AC L + ++ + ++V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
L+ Y K G ++ AR +FD +PE+ V+W
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWT--------------------------- 218
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQ-MRTSIHLDHVAMVVGLNACSHIGALKLGKE 301
TM G + G +L+L Q M ++ D + L+ACS + L+ GK+
Sbjct: 219 --------TMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQ 270
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
IH H +R G ++ ++ N LI Y +CG + A+ LF M K +I+W +LSG+
Sbjct: 271 IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNAL 330
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
E LF M G +P+ +S+L CA + L G + H Y +K + + N
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT-N 389
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGY---GMKGEGQMALNIFEEMCKFK 478
+L+DMYA+ + +A++VFD D V + AMI GY G + E ALNIF +M
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 479 IKPDHVAMVAVLTA-CSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNK 537
I+P + V++L A S + L Q+ ++ YG+ I + + D++ L
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQI--HGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 538 AKEIITRMPYKPTPAMWATLIGAC--RIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMY 595
++ + M K +W ++ + L + +L +PD + ANM
Sbjct: 508 SRLVFDEMKVKDL-VIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF----ANMV 562
Query: 596 AAAG 599
AAG
Sbjct: 563 TAAG 566
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 200/442 (45%), Gaps = 38/442 (8%)
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNE 124
QL + ++ GFD++ + L+ FY + D A +V ++ + W +IS V+
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 125 LFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHN 184
+L + +++ V+PD + +VL AC L G ++H I + + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 185 ALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM 244
L+ Y K G++ A LF+ MP ++ +SW T++S Y EA +LF M + G++
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHG 304
++ +++ L +C+ + AL G ++H
Sbjct: 349 DMYACSSI----------------------------------LTSCASLHALGFGTQVHA 374
Query: 305 HAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD---R 361
+ ++ V N+LI MY++C L A +F ++ +NAM+ G++ +
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
+ E +FR M P+ +T S+L A + +L K+ H +M + + +
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG-LMFKYGLNLDIFAGS 493
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
L+D+Y+ + +++ VFD + +D V + +M GY + E + ALN+F E+ + +P
Sbjct: 494 ALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERP 553
Query: 482 DHVAMVAVLTACSHSGLVAQGQ 503
D ++TA + V GQ
Sbjct: 554 DEFTFANMVTAAGNLASVQLGQ 575
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/609 (30%), Positives = 311/609 (51%), Gaps = 51/609 (8%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNML 116
++SL GK++HA VI LGF + + L+S Y + DA V E + + WN +
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-----KAI 171
IS ++ +L +++ML+ PD F+ S L AC + G E+H I
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
E G + V +++ MY+K+G++ A +F+ M +R
Sbjct: 263 ETGD----VMVMTSILDMYSKYGEVSYAERIFNGMIQR---------------------- 296
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM--RTSIHLDHVAMVVGLNA 289
NI+ WN M G Y G A +M + + D + + L A
Sbjct: 297 -------------NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Query: 290 CSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
A+ G+ IHG+A+R GF + ALI MY CG L A ++F RM EK +I+W
Sbjct: 344 ----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISW 399
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
N++++ + + LF+++ P+ TIAS+LP A +L G+E H YI+K
Sbjct: 400 NSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK 459
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
+ ++L N+LV MYA G + +A++ F+ + +D V++ ++I Y + G G++++
Sbjct: 460 SRYWSNTIIL-NSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVW 518
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
+F EM ++ P+ ++L ACS SG+V +G F+ M +YGI P IEHY CM DL
Sbjct: 519 LFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLI 578
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
GR G + AK + MP+ PT +W +L+ A R H + + E+AA ++ +M+ D++G Y+
Sbjct: 579 GRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYV 638
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYP 649
L+ NMYA AG W ++ ++ M + G+ + + V+ G+ F GD S+ +IY
Sbjct: 639 LLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYE 698
Query: 650 LMDGLNELM 658
++D ++ ++
Sbjct: 699 VLDVVSRMV 707
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 259/525 (49%), Gaps = 57/525 (10%)
Query: 78 NTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKML 137
N L R + +A L +DA + + + + WN++I F L++EA+ Y +M+
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 138 RKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AIEVGSMGWSLFVHNALVSMYAKFGKL 196
V D FTYP V+K+ + G ++H I++G + ++V N+L+S+Y K G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVS-DVYVCNSLISLYMKLGCA 181
Query: 197 EVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGY 256
A +F+ MPERD VSWN++IS Y + G + LF+ M + G
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG--------------- 226
Query: 257 LHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLD- 315
FK D + + L ACSH+ + K+GKEIH HAVR+ + D
Sbjct: 227 -----FKP--------------DRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 316 NVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHE 375
V +++ MYS+ G++ +A +F M ++ ++ WN M+ +A RV + F++M +
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 376 -GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVL 434
G +P+ +T ++LP A + G+ H Y M+R F +++L L+DMY G++
Sbjct: 328 NGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLETALIDMYGECGQLK 382
Query: 435 EAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
A+ +FD + ++ +++ ++I Y G+ AL +F+E+ + PD + ++L A +
Sbjct: 383 SAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442
Query: 495 HSGLVAQGQVLFQEMV-----DDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKP 549
S +++G+ + +V + I+ + H ++ G L A++ + K
Sbjct: 443 ESLSLSEGREIHAYIVKSRYWSNTIILNSLVH------MYAMCGDLEDARKCFNHILLKD 496
Query: 550 TPAMWATLIGACRIHGNTVLGEWAAGKLL--EMKPDHSGYYILIA 592
+ W ++I A +HG + W +++ + P+ S + L+A
Sbjct: 497 VVS-WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 181/365 (49%), Gaps = 12/365 (3%)
Query: 198 VARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYL 257
V R + + +D + + +A +A +LF+ M + + +WN M G+
Sbjct: 51 VLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKA----DAFLWNVMIKGFT 106
Query: 258 HAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDN 316
G + A++ S+M + D + + + I +L+ GK+IH ++ GF
Sbjct: 107 SCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVY 166
Query: 317 VRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG 376
V N+LI++Y + G A +F+ M E+ +++WN+M+SG+ + LF++ML G
Sbjct: 167 VCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG 226
Query: 377 AEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEA 436
+P+ + S L C+ + + + GKE HC+ ++ +++ +++DMY++ G+V A
Sbjct: 227 FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA 286
Query: 437 KRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFK-IKPDHVAMVAVLTACSH 495
+R+F+ + +R+ V + MI Y G A F++M + ++PD + + +L A +
Sbjct: 287 ERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA- 345
Query: 496 SGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWA 555
+ +G+ + + G +P + + D++G G L A+ I RM K + W
Sbjct: 346 ---ILEGRTIHGYAMRR-GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVIS-WN 400
Query: 556 TLIGA 560
++I A
Sbjct: 401 SIIAA 405
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 287/546 (52%), Gaps = 40/546 (7%)
Query: 120 FVRNELFVEALSAYRKMLRKQVIP-DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGW 178
F N+L + S L IP D Y ++LK C G VH I
Sbjct: 37 FPSNDLLLRTSS---NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRH 93
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQ 238
+ + N L++MYAK G LE AR +F+ MP+RD V+W T+IS Y+ +A F +M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 239 EEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKL 298
G N ++ V+ A G
Sbjct: 154 RFGYSPNEFT--------------------------------LSSVIKAAAAERRGC--C 179
Query: 299 GKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAH 358
G ++HG V+ GFD +V +AL+ +Y+R G + A ++F +E + ++WNA+++G A
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 359 MDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL 418
++ LF+ ML +G P++ + AS+ C+ L+ GK H Y++K + K
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE-KLVAF 298
Query: 419 LWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFK 478
NTL+DMYA+SG + +A+++FD L +RD V++ +++ Y G G+ A+ FEEM +
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 479 IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKA 538
I+P+ ++ ++VLTACSHSGL+ +G ++ M D GI+P HY + DL GRAG LN+A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 539 KEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAA 598
I MP +PT A+W L+ ACR+H NT LG +AA + E+ PD G ++++ N+YA+
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 599 GCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELM 658
G W++ A VR M+ GVKK P C+WV++ F D +P EI + + +
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
Query: 659 KDAGYI 664
K+ GY+
Sbjct: 538 KELGYV 543
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 200/431 (46%), Gaps = 40/431 (9%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C L G+ +HA ++ F + +M L++ YA+ ++A V E + + W
Sbjct: 70 CTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTW 129
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
LIS + +++ +AL + +MLR P+EFT SV+KA G ++H
Sbjct: 130 TTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK 189
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
++ V +AL+ +Y ++G ++ A+ +FD + R+DVSWN +I+ +A R +A +L
Sbjct: 190 CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI 293
F+ M +G + + ++ G ACS
Sbjct: 250 FQGMLRDGFRPSHFSYASLFG----------------------------------ACSST 275
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
G L+ GK +H + +++G ++ N L+ MY++ G + A +F R+ ++ +++WN++L
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY-IMKREQ 412
+ +A E + F +M G PN ++ SVL C+ L G +H Y +MK++
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG--WHYYELMKKDG 393
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEGQMALNIF 471
+ T+VD+ R+G + A R + + + A++ M ++
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
Query: 472 EEMCKFKIKPD 482
E + F++ PD
Sbjct: 454 EHV--FELDPD 462
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 299/635 (47%), Gaps = 73/635 (11%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYA--RFNLFDDACIVTESSSSLEPLHWNMLISMFV 121
KQ+ AQ+I G + RL++F A D + + + + WN+ I F
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 122 RNELFVEALSAYRKMLRK---QVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGW 178
+E E+ Y++MLR + PD FTYP + K C +L + G + + +
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLEL 189
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQ 238
VHNA + M+A G +E AR +FD P RD VS
Sbjct: 190 VSHVHNASIHMFASCGDMENARKVFDESPVRDLVS------------------------- 224
Query: 239 EEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALK 297
WN + GY G + A+ + M + + D V M+ +++CS +G L
Sbjct: 225 ----------WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLN 274
Query: 298 LGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYM--------------------- 336
GKE + + G + + NAL+ M+S+CGD+ A
Sbjct: 275 RGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYA 334
Query: 337 ----------LFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIAS 386
LF MEEK ++ WNAM+ G R + LF++M +P+ +T+
Sbjct: 335 RCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIH 394
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR 446
L C+++ L G H YI ++ + L +LVDMYA+ G + EA VF + R
Sbjct: 395 CLSACSQLGALDVGIWIHRYI-EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR 453
Query: 447 DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLF 506
+ +TYTA+I G + G+ A++ F EM I PD + + +L+AC H G++ G+ F
Sbjct: 454 NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF 513
Query: 507 QEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN 566
+M + + P+++HY+ M DL GRAGLL +A ++ MP + A+W L+ CR+HGN
Sbjct: 514 SQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGN 573
Query: 567 TVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVD 626
LGE AA KLLE+ P SG Y+L+ MY A W + R M GV+K PGC+ ++
Sbjct: 574 VELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIE 633
Query: 627 VGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDA 661
V G F V D S P + +IY + L M+ +
Sbjct: 634 VNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRSS 668
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 215/417 (51%), Gaps = 8/417 (1%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C ++ S G + V+ L + + + + +A ++A V + S + + W
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSW 225
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N LI+ + + +A+ Y+ M + V PD+ T ++ +C L D G E ++ ++
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ ++ + NAL+ M++K G + AR +FDN+ +R VSW T+IS YA G + KL
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKL 345
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSH 292
F+ M+E+ ++++WN M GG + A + AL L +M+TS D + M+ L+ACS
Sbjct: 346 FDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQ 401
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+GAL +G IH + + + + +L+ MY++CG++ A +F ++ + +T+ A+
Sbjct: 402 LGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAI 461
Query: 353 LSGFA-HMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
+ G A H D +S+ F +M+ G P+ +T +L C +Q G+++ + R
Sbjct: 462 IGGLALHGDASTAISY-FNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRF 520
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEGQMA 467
L ++ +VD+ R+G + EA R+ +S+ D + A++ G M G ++
Sbjct: 521 NLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/661 (29%), Positives = 321/661 (48%), Gaps = 86/661 (13%)
Query: 31 HAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYA 90
H AASSP F C N++SL +Q H + G + + +LVS Y
Sbjct: 40 HYAASSPCF---------LLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYG 87
Query: 91 RFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPS 150
F DA +V + + W +++ + N+ VE + Y +++ D+ +
Sbjct: 88 FFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSK 147
Query: 151 VLKACGELLDCASGVEVH-KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER 209
LKAC EL D +G ++H + ++V S + V L+ MYAK G+++ A +F+++ R
Sbjct: 148 ALKACTELQDLDNGKKIHCQLVKVPS--FDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR 205
Query: 210 DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTM-----------AGGYLH 258
+ V W ++I+ Y E LF RM+E V N + T+ G + H
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 259 AGNFKGALKLLSQMRTSI---------------------HLDHV---AMVVG-------- 286
K ++L S + TS+ H+D V AM+VG
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 287 ------------------------LNACSHIGALKLGKEIHGHAVRTG-FDVLDNVRNAL 321
L+ C I L+LG+ +HG +++ G +D NV NAL
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT--NVANAL 383
Query: 322 ITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNY 381
+ MY++C A +F+ EK ++ WN+++SGF+ + E FLF +M E PN
Sbjct: 384 VHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443
Query: 382 VTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL-LWNTLVDMYARSGKVLEAKRVF 440
VT+AS+ CA + +L G H Y +K + + L+D YA+ G A+ +F
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503
Query: 441 DSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVA 500
D++ ++ +T++AMI GYG +G+ +L +FEEM K + KP+ ++L+AC H+G+V
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563
Query: 501 QGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGA 560
+G+ F M DY P +HY CM D+ RAG L +A +II +MP +P + +
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623
Query: 561 CRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAP 620
C +H LGE K+L++ PD + YY+L++N+YA+ G W++ EVR M+ G+ K
Sbjct: 624 CGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIA 683
Query: 621 G 621
G
Sbjct: 684 G 684
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 196/645 (30%), Positives = 324/645 (50%), Gaps = 89/645 (13%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYAR---------FNLFDDACIVTESSSSLEPLHWN 114
KQLH+Q I+ G N +L F+ + LF + E + + WN
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLF---VKIPEP----DVVVWN 103
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSV---LKACGELLDCASGVEVHKAI 171
+I + + + E + Y ML++ V PD T+P + LK G L C + H +
Sbjct: 104 NMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCH-VV 162
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ G +G +L+V NALV MY+ G +++AR +FD + D SWN +IS Y
Sbjct: 163 KFG-LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY---------- 211
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNAC 290
RM+E ++ +++LL +M R + V +++ L+AC
Sbjct: 212 ---NRMKE----------------------YEESIELLVEMERNLVSPTSVTLLLVLSAC 246
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
S + L K +H + + + NAL+ Y+ CG++ A +F+ M+ + +I+W
Sbjct: 247 SKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWT 306
Query: 351 AMLSG-------------FAHMDRVDEVSF------------------LFRQMLHEGAEP 379
+++ G F M D +S+ +FR+M G P
Sbjct: 307 SIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP 366
Query: 380 NYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRV 439
+ T+ SVL CA + +L+ G+ YI K + K +++ N L+DMY + G +A++V
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDK-NKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 440 FDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLV 499
F + +RD+ T+TAM+ G G+GQ A+ +F +M I+PD + + VL+AC+HSG+V
Sbjct: 426 FHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMV 485
Query: 500 AQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIG 559
Q + F +M D+ I P + HY CM D+ GRAGL+ +A EI+ +MP P +W L+G
Sbjct: 486 DQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLG 545
Query: 560 ACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKA 619
A R+H + + E AA K+LE++PD+ Y L+ N+YA W +L EVR + ++ +KK
Sbjct: 546 ASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKT 605
Query: 620 PGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
PG + ++V G F GD S+ + EIY ++ L + A Y+
Sbjct: 606 PGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYL 650
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 213/434 (49%), Gaps = 8/434 (1%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLIS 118
+L+ GK+LH V+ G N + LV Y+ L D A V + + WN++IS
Sbjct: 150 ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 119 MFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGW 178
+ R + + E++ +M R V P T VL AC ++ D VH+ +
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQ 238
SL + NALV+ YA G++++A +F +M RD +SW +I+ Y RG A F++M
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 239 EEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL-DHVAMVVGLNACSHIGALK 297
+ I W M GYL AG F +L++ +M+++ + D MV L AC+H+G+L+
Sbjct: 330 VR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 298 LGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFA 357
+G+ I + + V NALI MY +CG A +F M+++ TW AM+ G A
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 445
Query: 358 HMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYL 417
+ + E +F QM +P+ +T VL C + ++F + + + L
Sbjct: 446 NNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSL 505
Query: 418 LLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK 476
+ + +VDM R+G V EA + + + + + A++ + + MA +++
Sbjct: 506 VHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKI-- 563
Query: 477 FKIKPDHVAMVAVL 490
+++PD+ A+ A+L
Sbjct: 564 LELEPDNGAVYALL 577
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/614 (29%), Positives = 313/614 (50%), Gaps = 42/614 (6%)
Query: 55 INVNSLSPGKQLHAQVI-SLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
I+ +S+ G+ +HA+++ +L + L++ Y++ + + A +V + + + W
Sbjct: 17 ISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSW 76
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AIE 172
LIS +N F AL + +M R+ V+P++FT+P KA L +G ++H A++
Sbjct: 77 TSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVK 136
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
G + +FV + MY K + AR LFD +PER
Sbjct: 137 CGRI-LDVFVGCSAFDMYCKTRLRDDARKLFDEIPER----------------------- 172
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACS 291
N+ WN + G + A++ + R H + + LNACS
Sbjct: 173 ------------NLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
L LG ++HG +R+GFD +V N LI Y +C + + ++F M K ++W +
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCS 280
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
+++ + ++ S L+ + + E + I+SVL CA +A L+ G+ H + +K
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK-A 339
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIF 471
+ + + + LVDMY + G + ++++ FD + ++ VT ++I GY +G+ MAL +F
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 472 EEMCKFKI--KPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
EEM P+++ V++L+ACS +G V G +F M YGI P EHY+C+ D+
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
GRAG++ +A E I +MP +PT ++W L ACR+HG LG AA L ++ P SG ++
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 519
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYP 649
L++N +AAAG W+E VR ++ +G+KK G +W+ V + F D S+ EI
Sbjct: 520 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 579
Query: 650 LMDGLNELMKDAGY 663
+ L M+ AGY
Sbjct: 580 TLAKLRNEMEAAGY 593
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 290/552 (52%), Gaps = 42/552 (7%)
Query: 113 WNMLISMFVRNELFVEALS--AYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
W+ LI F LS AYR M R VIP T+P +LKA +L D ++ + H
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAH 128
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
I KFG + D N++IS Y+S G + A
Sbjct: 129 I-------------------VKFGL------------DSDPFVRNSLISGYSSSGLFDFA 157
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNA 289
+LF+ +++ +++ W M G++ G+ A+ +M+ T + + + +V L A
Sbjct: 158 SRLFDGAEDK----DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA 213
Query: 290 CSHIGALKLGKEIHGHAVRTGFDVLDN-VRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
+ ++ G+ +HG + TG D + ++L+ MY +C A +F M + ++T
Sbjct: 214 AGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVT 273
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
W A+++G+ D+ +F +ML PN T++SVL CA + L G+ HCY++
Sbjct: 274 WTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMI 333
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
K + TL+D+Y + G + EA VF+ L ++ T+TAMI G+ G + A
Sbjct: 334 K-NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAF 392
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
++F M + P+ V +AVL+AC+H GLV +G+ LF M + + P+ +HYACM DL
Sbjct: 393 DLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDL 452
Query: 529 FGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYY 588
FGR GLL +AK +I RMP +PT +W L G+C +H + LG++AA ++++++P HSG Y
Sbjct: 453 FGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRY 512
Query: 589 ILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNP-HAGEI 647
L+AN+Y+ + W E+A VR M++ V K+PG +W++V G+ F D P + ++
Sbjct: 513 TLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDL 572
Query: 648 YPLMDGLNELMK 659
Y +D + M+
Sbjct: 573 YKTLDTVGVQMR 584
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 179/380 (47%), Gaps = 35/380 (9%)
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNE 124
Q HA ++ G D + + L+S Y+ LFD A + + + + + W +I FVRN
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 125 LFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA-IEVGSMGWSLFVH 183
EA+ + +M + V +E T SVLKA G++ D G VH +E G + +F+
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
++LV MY K + A+ +FD MP R+ V+W +I+ Y + + +FE M + V
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
N K LS + L+AC+H+GAL G+ +H
Sbjct: 304 PN--------------------EKTLSSV--------------LSACAHVGALHRGRRVH 329
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
+ ++ ++ LI +Y +CG L A ++F+R+ EK + TW AM++GFA
Sbjct: 330 CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYAR 389
Query: 364 EVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTL 423
+ LF ML PN VT +VL CA ++ G+ + R + + +
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 424 VDMYARSGKVLEAKRVFDSL 443
VD++ R G + EAK + + +
Sbjct: 450 VDLFGRKGLLEEAKALIERM 469
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 12/286 (4%)
Query: 7 ASLKNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQL 66
A + FV +G S A F+ ++ A++ V + G+ +
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANE-------MTVVSVLKAAGKVEDVRFGRSV 226
Query: 67 HAQVISLGFDQNTIML-PRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNEL 125
H + G + + + LV Y + + +DDA V + S + W LI+ +V++
Sbjct: 227 HGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRC 286
Query: 126 FVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNA 185
F + + + +ML+ V P+E T SVL AC + G VH + S+ +
Sbjct: 287 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTT 346
Query: 186 LVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
L+ +Y K G LE A +F+ + E++ +W +I+ +A+ G +AF LF M V N
Sbjct: 347 LIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN 406
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL----DHVAMVVGL 287
+ + + H G + +L M+ ++ DH A +V L
Sbjct: 407 EVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDL 452
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 315/621 (50%), Gaps = 48/621 (7%)
Query: 53 GCINVNSLSPGKQLHAQVISLG-FDQNTIMLPRLVSFYAR-FNLFDDACIVTESSSSLEP 110
C N + + G+ ++ G F+ + + L+ + + N F++A V + S L
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK- 169
+ W ++I+ ++ EA+ + M+ D+FT SV AC EL + + G ++H
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW 294
Query: 170 AIEVGSMGWSLFVHNALVSMYAKF---GKLEVARHLFDNMPERDDVSWNTIISCYASRGT 226
AI G + V +LV MYAK G ++ R +FD M + +SW +I+
Sbjct: 295 AIRSGLVD---DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT------- 344
Query: 227 WGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKG-ALKLLSQMRTSIHLD--HVAM 283
GY+ N A+ L S+M T H++ H
Sbjct: 345 ----------------------------GYMKNCNLATEAINLFSEMITQGHVEPNHFTF 376
Query: 284 VVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE 343
AC ++ ++GK++ G A + G +V N++I+M+ + + A F+ + E
Sbjct: 377 SSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSE 436
Query: 344 KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
K L+++N L G ++ L ++ + T AS+L A + +++ G++
Sbjct: 437 KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI 496
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGE 463
H ++K + N L+ MY++ G + A RVF+ + R+ +++T+MI G+ G
Sbjct: 497 HSQVVKL-GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 464 GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA 523
L F +M + +KP+ V VA+L+ACSH GLV++G F M +D+ I P++EHYA
Sbjct: 556 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 615
Query: 524 CMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPD 583
CM DL RAGLL A E I MP++ +W T +GACR+H NT LG+ AA K+LE+ P+
Sbjct: 616 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 675
Query: 584 HSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPH 643
YI ++N+YA AG W E E+R M+ + K GC+W++VG + F+VGDT++P+
Sbjct: 676 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 735
Query: 644 AGEIYPLMDGLNELMKDAGYI 664
A +IY +D L +K GY+
Sbjct: 736 AHQIYDELDRLITEIKRCGYV 756
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/552 (20%), Positives = 250/552 (45%), Gaps = 51/552 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL---E 109
CI GK +HA++I + ++++ L+S Y++ A V E+ +
Sbjct: 71 SCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRD 130
Query: 110 PLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASG-VEVH 168
+ W+ +++ + N ++A+ + + L ++P+++ Y +V++AC G V +
Sbjct: 131 VVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLG 190
Query: 169 KAIEVGSMGWSLFVHNALVSMYAK-FGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW 227
++ G + V +L+ M+ K E A +FD M E + V+W +I+ G
Sbjct: 191 FLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGL 287
EA + F M G E D +
Sbjct: 251 REAIRFFLDMVLSGFES----------------------------------DKFTLSSVF 276
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRC---GDLGHAYMLFQRMEEK 344
+AC+ + L LGK++H A+R+G ++D+V +L+ MY++C G + +F RME+
Sbjct: 277 SACAELENLSLGKQLHSWAIRSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 345 GLITWNAMLSGF-AHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGKE 402
+++W A+++G+ + + E LF +M+ +G EPN+ T +S C +++ + GK+
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKG 462
KR + N+++ M+ +S ++ +A+R F+SL+ ++ V+Y + G
Sbjct: 395 VLGQAFKR-GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 463 EGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHY 522
+ A + E+ + ++ ++L+ ++ G + +G+ + ++V G+
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQPVC 512
Query: 523 ACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLE--M 580
+ ++ + G ++ A + M + + W ++I HG + +++E +
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVIS-WTSMITGFAKHGFAIRVLETFNQMIEEGV 571
Query: 581 KPDHSGYYILIA 592
KP+ Y +++
Sbjct: 572 KPNEVTYVAILS 583
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 197/447 (44%), Gaps = 53/447 (11%)
Query: 129 ALSAYRKMLRKQVIP-DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALV 187
A+SA M R + P D T+ S+LK+C D G VH + + ++N+L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 188 SMYAKFGKLEVARHLFDNMP---ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM 244
S+Y+K G A +F+ M +RD VSW+ +++CY + G +A K+F E G+
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHG 304
N + + + ACS+ + +G+ G
Sbjct: 165 NDYCYTAV----------------------------------IRACSNSDFVGVGRVTLG 190
Query: 305 HAVRTG-FDVLDNVRNALITMYSRC-GDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
++TG F+ V +LI M+ + +AY +F +M E ++TW M++ M
Sbjct: 191 FLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
E F M+ G E + T++SV CA + NL GK+ H + ++ + + +
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD---VECS 307
Query: 423 LVDMYAR---SGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMK--GEGQMALNIFEEM-CK 476
LVDMYA+ G V + ++VFD + +++TA+I GY MK A+N+F EM +
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY-MKNCNLATEAINLFSEMITQ 366
Query: 477 FKIKPDHVAMVAVLTACSH-SGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLL 535
++P+H + AC + S QVL Q G+ + +F ++ +
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF--KRGLASNSSVANSVISMFVKSDRM 424
Query: 536 NKAKEIITRMPYKPTPAMWATLIGACR 562
A+ + K + L G CR
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCR 451
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 155/330 (46%), Gaps = 13/330 (3%)
Query: 238 QEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIH-LDHVAMVVGLNACSHIGA 295
+ V I + + + +L+AG+ +GA+ L M R I +D V L +C
Sbjct: 18 SQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARD 77
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME---EKGLITWNAM 352
+LGK +H + + + N+LI++YS+ GD A +F+ M ++ +++W+AM
Sbjct: 78 FRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAM 137
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
++ + + R + +F + L G PN +V+ C+ + G+ ++MK
Sbjct: 138 MACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH 197
Query: 413 FKEYLLLWNTLVDMYARSGKVLE-AKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIF 471
F+ + + +L+DM+ + E A +VFD ++ + VT+T MI G + A+ F
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 472 EEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGR 531
+M + D + +V +AC+ ++ G+ L + G++ +E + D++ +
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDDVE--CSLVDMYAK 314
Query: 532 A---GLLNKAKEIITRMPYKPTPAMWATLI 558
G ++ +++ RM + W LI
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMS-WTALI 343
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 27/300 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
G NV S+ G+Q+H+QV+ LG N + L+S Y++ D A V + +
Sbjct: 483 GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS 542
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASG-VEVHKAI 171
W +I+ F ++ + L + +M+ + V P+E TY ++L AC + + G +
Sbjct: 543 WTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMY 602
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDV-SWNTII-SCYASRGTWGE 229
E + + + +V + + G L A + MP + DV W T + +C T E
Sbjct: 603 EDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNT--E 660
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNA 289
KL R E + ++ Y AG ++ + ++ +M+ +V
Sbjct: 661 LGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKER-------NLVKEGG 713
Query: 290 CSHIGALKLGKEIHGHAVRTG--------FDVLDNVRNALITMYSRCGDLGHAYMLFQRM 341
CS I ++G +IH V +D LD LIT RCG + ++ ++
Sbjct: 714 CSWI---EVGDKIHKFYVGDTAHPNAHQIYDELDR----LITEIKRCGYVPDTDLVLHKL 766
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 300/580 (51%), Gaps = 50/580 (8%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL------H 112
+L+ +Q+HA+VI GF+ ++ L + Y + N D A SS + P
Sbjct: 19 TLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFA----TSSFNRIPCWKRNRHS 74
Query: 113 WNMLISMFVRNE--LFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
WN ++S + +++ + + L Y +M R D F +KAC L +G+ +H
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIH-- 132
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
L + N L ++DD +++ YA GT A
Sbjct: 133 --------GLAMKNGL---------------------DKDDYVAPSLVEMYAQLGTMESA 163
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNA 289
K+F+ + N ++W + GYL +L MR T + LD + ++ + A
Sbjct: 164 QKVFDEIPVR----NSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKA 219
Query: 290 CSHIGALKLGKEIHGHAVRTGF-DVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
C ++ A K+GK +HG ++R F D D ++ ++I MY +C L +A LF+ ++ ++
Sbjct: 220 CGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVM 279
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
W ++SGFA +R E LFRQML E PN T+A++L C+ + +L+HGK H Y M
Sbjct: 280 WTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGY-M 338
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
R + + + + +DMYAR G + A+ VFD + R+ +++++MI +G+ G + AL
Sbjct: 339 IRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEAL 398
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
+ F +M + P+ V V++L+ACSHSG V +G F+ M DYG++P EHYACM DL
Sbjct: 399 DCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDL 458
Query: 529 FGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYY 588
GRAG + +AK I MP KP + W L+ ACRIH L A KLL M+P+ S Y
Sbjct: 459 LGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVY 518
Query: 589 ILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVG 628
+L++N+YA AG W + VR M G +K G + +VG
Sbjct: 519 VLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEVG 558
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 205/452 (45%), Gaps = 60/452 (13%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C+ + L G +H + G D++ + P LV YA+ + A V + +
Sbjct: 118 ACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVL 177
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELL-----DCASGVEV 167
W +L+ +++ E + M + D T ++KACG + C GV +
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSI 237
Query: 168 HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW 227
++ + S ++ +++ MY K L+ AR LF+ +R+ V W T+IS +A
Sbjct: 238 RRSF----IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA 293
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGL 287
EAF LF +M +R SI + + L
Sbjct: 294 VEAFDLFRQM----------------------------------LRESILPNQCTLAAIL 319
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVR-NALITMYSRCGDLGHAYMLFQRMEEKGL 346
+CS +G+L+ GK +HG+ +R G + +D V + I MY+RCG++ A +F M E+ +
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIRNGIE-MDAVNFTSFIDMYARCGNIQMARTVFDMMPERNV 378
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHG-KEFHC 405
I+W++M++ F +E F +M + PN VT S+L C+ N++ G K+F
Sbjct: 379 ISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFE- 437
Query: 406 YIMKREQFKEYLLL-----WNTLVDMYARSGKVLEAKRVFDSLTRRDEVT-YTAMIRGYG 459
++Y ++ + +VD+ R+G++ EAK D++ + + + A++
Sbjct: 438 -----SMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACR 492
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLT 491
+ E +A I E++ ++P+ ++ +L+
Sbjct: 493 IHKEVDLAGEIAEKL--LSMEPEKSSVYVLLS 522
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 306 bits (783), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 177/615 (28%), Positives = 320/615 (52%), Gaps = 46/615 (7%)
Query: 59 SLSPGKQLHAQVISLG--FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNML 116
S+ + ++ LG + ++ ++ +S YA + + V +S WN +
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 117 ISMFVRNELFVEALSAYRKML-RKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
I ++V+N+ VE++ + + + K+++ DE TY A L G + H +
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ + N+L+ MY++ G + + +F +M ER
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER-------------------------- 382
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIG 294
+++ WNTM ++ G L L+ +M + +D++ + L+A S++
Sbjct: 383 ---------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLR 433
Query: 295 ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQR--MEEKGLITWNAM 352
++GK+ H +R G + + + LI MYS+ G + + LF+ E+ TWN+M
Sbjct: 434 NKEIGKQTHAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSM 492
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
+SG+ ++ +FR+ML + PN VT+AS+LP C++I ++ GK+ H + + R+
Sbjct: 493 ISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI-RQY 551
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
+ + + + LVDMY+++G + A+ +F R+ VTYT MI GYG G G+ A+++F
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
M + IKPD + VAVL+ACS+SGL+ +G +F+EM + Y I P EHY C+ D+ GR
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 533 GLLNKAKEIITRMPYKPTPA-MWATLIGACRIHGNTVLGEWAAGKL--LEMKPDHSGYYI 589
G +N+A E + + + A +W +L+G+C++HG L E + +L + + SGY +
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEV 731
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYP 649
L++NMYA W + +VR MR G+KK G + +++ G + F D +PH+ EIY
Sbjct: 732 LLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYD 791
Query: 650 LMDGLNELMKDAGYI 664
++DGL + M+ ++
Sbjct: 792 VIDGLAKDMRGDSFL 806
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 226/502 (45%), Gaps = 85/502 (16%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIP----DEFTYPSVLKACGELLDCASGVEVH 168
WN +I F+ N L EAL Y +M K+ P D +TY S LKAC E + +G VH
Sbjct: 73 WNTIIIGFICNNLPHEALLFYSRM--KKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVH 130
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKF------GKLEVARHLFDNMPERDDVSWNTIISCYA 222
+ S VHN+L++MY + +V R +FDNM ++ V+WNT+IS Y
Sbjct: 131 CHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYV 190
Query: 223 SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVA 282
G EA + F M MR + V+
Sbjct: 191 KTGRNAEACRQFGIM----------------------------------MRMEVKPSPVS 216
Query: 283 MVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDN--VRNALITMYSRCGDLGHAYMLFQR 340
V A S ++K +G ++ G + + + V ++ I+MY+ GD+ + +F
Sbjct: 217 FVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDS 276
Query: 341 MEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHE----GAEPNYVTIASVLPLCARIAN 396
E+ + WN M+ + D + E LF + + E Y+ AS + + +
Sbjct: 277 CVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAV---SALQQ 333
Query: 397 LQHGKEFHCYIMKREQFKEY-LLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMI 455
++ G++FH ++ K F+E +++ N+L+ MY+R G V ++ VF S+ RD V++ MI
Sbjct: 334 VELGRQFHGFVSK--NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMI 391
Query: 456 RGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS-----------HSGLVAQGQV 504
+ G L + EM K K D++ + A+L+A S H+ L+ QG +
Sbjct: 392 SAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-I 450
Query: 505 LFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY-KPTPAMWATLIGACRI 563
F+ M + Y + D++ ++GL+ ++++ Y + A W ++I
Sbjct: 451 QFEGM-NSY-----------LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQ 498
Query: 564 HGNTVLGEWAAGKLLE--MKPD 583
+G+T K+LE ++P+
Sbjct: 499 NGHTEKTFLVFRKMLEQNIRPN 520
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 25/247 (10%)
Query: 329 GDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN--YVTIAS 386
G+ A LF + + + WN ++ GF + E + +M N T +S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLE------AKRVF 440
L CA NL+ GK HC++++ Q ++ N+L++MY + ++VF
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQ-NSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 441 DSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVA 500
D++ R++ V + +I Y G A F M + ++KP V+ V V A S S +
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 501 QGQVLF-------QEMVDDYGIIPR-IEHYACMADLFGRAGLLNKAKEIITRMPYKPTPA 552
+ V + E V D ++ I YA + D+ + + E
Sbjct: 232 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE--------RNIE 283
Query: 553 MWATLIG 559
+W T+IG
Sbjct: 284 VWNTMIG 290
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 316/591 (53%), Gaps = 45/591 (7%)
Query: 63 GKQLHAQVISLGFDQNTIMLPR-LVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFV 121
GK++HA V+ + + + L++ Y R A + ++ + + WN LI +V
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 122 RNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGW--S 179
+N ++ EAL + M+ DE + S++ A G L + +G+E+H V GW +
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAY--VIKHGWDSN 420
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
L V N L+ MY+K ++CY R F RM +
Sbjct: 421 LQVGNTLIDMYSKCN-----------------------LTCYMGRA--------FLRMHD 449
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKL 298
+ ++I W T+ GY AL+L + + + +D + + L A S + ++ +
Sbjct: 450 K----DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 299 GKEIHGHAVRTGFDVLDNV-RNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFA 357
KEIH H +R G +LD V +N L+ +Y +C ++G+A +F+ ++ K +++W +M+S A
Sbjct: 506 VKEIHCHILRKG--LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 563
Query: 358 HMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYL 417
E LFR+M+ G + V + +L A ++ L G+E HCY++ R+ F
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLL-RKGFCLEG 622
Query: 418 LLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKF 477
+ +VDMYA G + AK VFD + R+ + YT+MI YGM G G+ A+ +F++M
Sbjct: 623 SIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHE 682
Query: 478 KIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNK 537
+ PDH++ +A+L ACSH+GL+ +G+ + M +Y + P EHY C+ D+ GRA + +
Sbjct: 683 NVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVE 742
Query: 538 AKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAA 597
A E + M +PT +W L+ ACR H +GE AA +LLE++P + G +L++N++A
Sbjct: 743 AFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 802
Query: 598 AGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIY 648
G W+++ +VR M+ G++K PGC+W+++ G+ F D S+P + EIY
Sbjct: 803 QGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 853
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 241/520 (46%), Gaps = 49/520 (9%)
Query: 54 CINVNSLSPGKQLHAQVISL--GFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL 111
C ++S G+QLH+++ F+ + + +LV Y + DDA V +
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAF 148
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN +I +V N AL+ Y M + V ++P++LKAC +L D SG E+H +
Sbjct: 149 AWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLL 208
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDD-VSWNTIISCYASRGTWGEA 230
+ F+ NALVSMYAK L AR LFD E+ D V WN+I+S Y++ G E
Sbjct: 209 VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
+LF M G N +V L AC
Sbjct: 269 LELFREMHMTGPAPN----------------------------------SYTIVSALTAC 294
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLD-NVRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
KLGKEIH +++ + V NALI MY+RCG + A + ++M ++TW
Sbjct: 295 DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW 354
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
N+++ G+ E F M+ G + + V++ S++ R++NL G E H Y++K
Sbjct: 355 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
+ L + NTL+DMY++ R F + +D +++T +I GY AL
Sbjct: 415 H-GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM---VDDYGIIPRIEHYACMA 526
+F ++ K +++ D + + ++L A S V + ++ +E+ + G++ + +
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRASS----VLKSMLIVKEIHCHILRKGLLDTVIQNE-LV 528
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN 566
D++G+ + A + + K + W ++I + ++GN
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVS-WTSMISSSALNGN 567
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 166/351 (47%), Gaps = 38/351 (10%)
Query: 144 DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL-FVHNALVSMYAKFGKLEVARHL 202
+ F Y VL+ CG+ + G ++H I + L F+ LV MY K G L+ A +
Sbjct: 81 EAFAY--VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKV 138
Query: 203 FDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNF 262
FD MP+R +WNT+I Y S G A L+ M+ EGV + + +F
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGL-------------SSF 185
Query: 263 KGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALI 322
LK AC+ + ++ G E+H V+ G+ + NAL+
Sbjct: 186 PALLK---------------------ACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALV 224
Query: 323 TMYSRCGDLGHAYMLFQRMEEKG-LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNY 381
+MY++ DL A LF +EKG + WN++LS ++ + E LFR+M G PN
Sbjct: 225 SMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNS 284
Query: 382 VTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFD 441
TI S L C + + GKE H ++K L + N L+ MY R GK+ +A+R+
Sbjct: 285 YTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILR 344
Query: 442 SLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
+ D VT+ ++I+GY + AL F +M K D V+M +++ A
Sbjct: 345 QMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 185/384 (48%), Gaps = 43/384 (11%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL---EPLHW 113
+++L G +LHA VI G+D N + L+ Y++ NL C + + + + + W
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL---TCYMGRAFLRMHDKDLISW 455
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
+I+ + +N+ VEAL +R + +K++ DE S+L+A L E+H I
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ + N LV +Y K + A +F+++ +D VSW ++IS A G EA +L
Sbjct: 516 KGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI 293
F RM E G + D VA++ L+A + +
Sbjct: 575 FRRMVETG----------------------------------LSADSVALLCILSAAASL 600
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
AL G+EIH + +R GF + ++ A++ MY+ CGDL A +F R+E KGL+ + +M+
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE-Q 412
+ + LF +M HE P++++ ++L C+ L G+ F IM+ E +
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGF-LKIMEHEYE 719
Query: 413 FKEYLLLWNTLVDMYARSGKVLEA 436
+ + + LVDM R+ V+EA
Sbjct: 720 LEPWPEHYVCLVDMLGRANCVVEA 743
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/601 (30%), Positives = 302/601 (50%), Gaps = 39/601 (6%)
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNEL 125
LH+ ++ LG+D N + L++ Y+ D A V E + + W ++S +V N
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 126 FVEALSAYRKMLRKQVIPDEFTYPSVLKACGEL--LDCASGVEVHKAIEVGSMGWSLFVH 183
F ++L M +P+ +T+ + LKA L D A GV H I V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV--HGQILKTCYVLDPRVG 285
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
L+ +Y + G + A +F+ MP+ D V W+ +I+ + G EA LF RM+E V
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVV 345
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
N +++ LN C+ LG+++H
Sbjct: 346 PNEFTLSSI----------------------------------LNGCAIGKCSGLGEQLH 371
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
G V+ GFD+ V NALI +Y++C + A LF + K ++WN ++ G+ ++
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGG 431
Query: 364 EVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTL 423
+ +FR+ L VT +S L CA +A++ G + H +K K+ + + N+L
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK-VAVSNSL 490
Query: 424 VDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDH 483
+DMYA+ G + A+ VF+ + D ++ A+I GY G G+ AL I + M KP+
Sbjct: 491 IDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNG 550
Query: 484 VAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIIT 543
+ + VL+ CS++GL+ QGQ F+ M+ D+GI P +EHY CM L GR+G L+KA ++I
Sbjct: 551 LTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIE 610
Query: 544 RMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSE 603
+PY+P+ +W ++ A N +A ++L++ P Y+L++NMYA A W+
Sbjct: 611 GIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWAN 670
Query: 604 LAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
+A +R M+ +GVKK PG +W++ G+ F VG + +P I +++ LN AGY
Sbjct: 671 VASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGY 730
Query: 664 I 664
+
Sbjct: 731 V 731
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 195/442 (44%), Gaps = 45/442 (10%)
Query: 55 INVNSLSPGKQLHAQVISLGFDQNTIMLPR----LVSFYARFNLFDDACIVTESSSSLEP 110
I + + K +H Q++ + ++ PR L+ Y + DA V +
Sbjct: 258 IGLGAFDFAKGVHGQILKTCY----VLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
+ W+ +I+ F +N EA+ + +M V+P+EFT S+L C G ++H
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ ++V NAL+ +YAK K++ A LF + +++VSWNT+I Y + G G+A
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
F +F +R + + V L AC
Sbjct: 434 FSMFRE----------------------------------ALRNQVSVTEVTFSSALGAC 459
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ + ++ LG ++HG A++T V N+LI MY++CGD+ A +F ME + +WN
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
A++SG++ + + M +PN +T VL C+ + G+E +++
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEV-TYTAMIRGYGMKGEGQMALN 469
+ L + +V + RSG++ +A ++ + + V + AM+ + + A
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
Query: 470 IFEEMCKFKIKPDHVAMVAVLT 491
EE+ KI P A +++
Sbjct: 640 SAEEI--LKINPKDEATYVLVS 659
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 122/539 (22%), Positives = 222/539 (41%), Gaps = 61/539 (11%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYAR-------FNLFDDACIVTESSS 106
CI N K +H ++ G + L++ Y + NLFD+
Sbjct: 59 CIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM-------- 110
Query: 107 SLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVE 166
P N+ + + + Y ++ R+ + + S LK L
Sbjct: 111 ---PERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 167 VHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGT 226
+H I + FV AL++ Y+ G ++ AR +F+ + +D V W I+SC
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC------ 221
Query: 227 WGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL-DHVAMVV 285
Y+ G F+ +LKLLS MR + + ++
Sbjct: 222 -----------------------------YVENGYFEDSLKLLSCMRMAGFMPNNYTFDT 252
Query: 286 GLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG 345
L A +GA K +HG ++T + + V L+ +Y++ GD+ A+ +F M +
Sbjct: 253 ALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKND 312
Query: 346 LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHC 405
++ W+ M++ F +E LF +M PN T++S+L CA G++ H
Sbjct: 313 VVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHG 372
Query: 406 YIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQ 465
++K F + + N L+D+YA+ K+ A ++F L+ ++EV++ +I GY GEG
Sbjct: 373 LVVK-VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGG 431
Query: 466 MALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACM 525
A ++F E + ++ V + L AC+ + G V + ++ +
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLG-VQVHGLAIKTNNAKKVAVSNSL 490
Query: 526 ADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDH 584
D++ + G + A+ + M A W LI HG LG A ++L++ D
Sbjct: 491 IDMYAKCGDIKFAQSVFNEMETIDV-ASWNALISGYSTHG---LGRQAL-RILDIMKDR 544
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 175/424 (41%), Gaps = 49/424 (11%)
Query: 140 QVIP--DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLE 197
+IP D Y ++L+ C + D S +H I LF N L++ Y K G +
Sbjct: 42 SIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDK 101
Query: 198 VARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYL 257
A +LFD MPER++VS+ T+ YA + G L+ R+ EG E+N +
Sbjct: 102 DALNLFDEMPERNNVSFVTLAQGYACQDPIG----LYSRLHREGHELNPHV--------- 148
Query: 258 HAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNV 317
F LKL + LD + L H V+ G+D V
Sbjct: 149 ----FTSFLKLF------VSLDKAEICPWL---------------HSPIVKLGYDSNAFV 183
Query: 318 RNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGA 377
ALI YS CG + A +F+ + K ++ W ++S + ++ L M G
Sbjct: 184 GAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF 243
Query: 378 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL---LWNTLVDMYARSGKVL 434
PN T + L + K H I+K Y+L + L+ +Y + G +
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILK----TCYVLDPRVGVGLLQLYTQLGDMS 299
Query: 435 EAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
+A +VF+ + + D V ++ MI + G A+++F M + + P+ + ++L C+
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 495 HSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMW 554
G+ L +V G I + D++ + ++ A ++ + K W
Sbjct: 360 IGKCSGLGEQL-HGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSW 417
Query: 555 ATLI 558
T+I
Sbjct: 418 NTVI 421
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 297/550 (54%), Gaps = 51/550 (9%)
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N L+ ++ N EAL ++++ D T +VLKAC EL G ++H I +
Sbjct: 159 NSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILI 215
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
G + ++++LV++YAK G L +A ++ + + E DD S + +IS YA+ G E+ L
Sbjct: 216 GGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGL 275
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFK-GALKLLSQMRTSIHLDHVAMVVGLNACSH 292
F+R V I+WN+M GY+ A N K AL L ++MR D + +NAC
Sbjct: 276 FDRKSNRCV----ILWNSMISGYI-ANNMKMEALVLFNEMRNETREDSRTLAAVINACIG 330
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNV---------------------------------RN 319
+G L+ GK++H HA + F ++D++ N
Sbjct: 331 LGFLETGKQMHCHACK--FGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLN 388
Query: 320 ALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEP 379
++I +Y CG + A +F+R+E K LI+WN+M +GF+ E F QM
Sbjct: 389 SMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPT 448
Query: 380 NYVTIASVLPLCARIANLQHGKEFHCYIMKREQ---FKEYLLLWNTLVDMYARSGKVLEA 436
+ V+++SV+ CA I++L+ G++ + R ++ ++L+D+Y + G V
Sbjct: 449 DEVSLSSVISACASISSLELGEQ----VFARATIVGLDSDQVVSSSLIDLYCKCGFVEHG 504
Query: 437 KRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHS 496
+RVFD++ + DEV + +MI GY G+G A+++F++M I+P + + VLTAC++
Sbjct: 505 RRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYC 564
Query: 497 GLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWAT 556
GLV +G+ LF+ M D+G +P EH++CM DL RAG + +A ++ MP+ +MW++
Sbjct: 565 GLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSS 624
Query: 557 LIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGV 616
++ C +G +G+ AA K++E++P++S Y+ ++ ++A +G W A VR MR V
Sbjct: 625 ILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNV 684
Query: 617 KKAPGCAWVD 626
K PG +W D
Sbjct: 685 TKNPGSSWTD 694
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 211/479 (44%), Gaps = 103/479 (21%)
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
+ V N L+ MY++ GK+ +AR+LFD MP+R+ SWNT+I Y + G G + + F+ M E
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 240 EG---------------------------VEMNIIIWNTMAGGYLHAGNFKGALKLLSQM 272
E +++ N++ GY+ G + AL+L ++
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 273 RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLG 332
S D + + L AC+ + ALK GK+IH + G + + ++L+ +Y++CGDL
Sbjct: 182 NFSA--DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 333 HA-YM------------------------------LFQRMEEKGLITWNAMLSGFAHMDR 361
A YM LF R + +I WN+M+SG+ +
Sbjct: 240 MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNM 299
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
E LF +M +E E + T+A+V+ C + L+ GK+ HC+ K + +++ +
Sbjct: 300 KMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDD-IVVAS 357
Query: 422 TLVDMYARSGKVLE-------------------------------AKRVFDSLTRRDEVT 450
TL+DMY++ G +E AKRVF+ + + ++
Sbjct: 358 TLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLIS 417
Query: 451 YTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM- 509
+ +M G+ G L F +M K + D V++ +V++AC+ + G+ +F
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 510 ---VDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHG 565
+D ++ + + DL+ + G + + + M K W ++I +G
Sbjct: 478 IVGLDSDQVVS-----SSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 239/525 (45%), Gaps = 66/525 (12%)
Query: 9 LKNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLHA 68
L ++ +G+ A + F + A A + C + +L GKQ+HA
Sbjct: 162 LHGYILNGYAEEALRLFKELNFSADAIT----------LTTVLKACAELEALKCGKQIHA 211
Query: 69 QVISLGFDQNTIMLPRLVSFYARFNLF-------------DDACI------------VTE 103
Q++ G + ++ M LV+ YA+ DD + V E
Sbjct: 212 QILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNE 271
Query: 104 S------SSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGE 157
S S+ + WN +IS ++ N + +EAL + +M R + D T +V+ AC
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIG 330
Query: 158 LLDCASGVEVH-KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNT 216
L +G ++H A + G + + V + L+ MY+K G A LF + D + N+
Sbjct: 331 LGFLETGKQMHCHACKFGLID-DIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNS 389
Query: 217 IISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTS 275
+I Y S G +A ++FER++ + ++I WN+M G+ G L+ QM +
Sbjct: 390 MIKVYFSCGRIDDAKRVFERIENK----SLISWNSMTNGFSQNGCTVETLEYFHQMHKLD 445
Query: 276 IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAY 335
+ D V++ ++AC+ I +L+LG+++ A G D V ++LI +Y +CG + H
Sbjct: 446 LPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGR 505
Query: 336 MLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIA 395
+F M + + WN+M+SG+A + E LF++M G P +T VL C
Sbjct: 506 RVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCG 565
Query: 396 NLQHGKEF-------HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRD 447
++ G++ H ++ +E F + +VD+ AR+G V EA + + + D
Sbjct: 566 LVEEGRKLFESMKVDHGFVPDKEHF-------SCMVDLLARAGYVEEAINLVEEMPFDVD 618
Query: 448 EVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
+++++RG G M E++ +++P++ L+A
Sbjct: 619 GSMWSSILRGCVANGYKAMGKKAAEKI--IELEPENSVAYVQLSA 661
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 105/223 (47%), Gaps = 3/223 (1%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C +++SL G+Q+ A+ +G D + ++ L+ Y + + V ++ + +
Sbjct: 459 ACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVP 518
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN +IS + N EA+ ++KM + P + T+ VL AC G ++ ++++
Sbjct: 519 WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMK 578
Query: 173 VGSMGWSLFVH-NALVSMYAKFGKLEVARHLFDNMP-ERDDVSWNTIISCYASRGTWGEA 230
V H + +V + A+ G +E A +L + MP + D W++I+ + G
Sbjct: 579 VDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMG 638
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR 273
K E++ E E N + + ++ + +G+++ + + MR
Sbjct: 639 KKAAEKIIELEPE-NSVAYVQLSAIFATSGDWESSALVRKLMR 680
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 291/573 (50%), Gaps = 44/573 (7%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C N+ +L G+ LH + G + + + SFY++ +A + +
Sbjct: 239 ACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFS 298
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W +I+ R+ E+ + +M K + PD ++ G+++ G H +
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVI 358
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
V N+L+SMY KF L VA K
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAE-------------------------------K 387
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT----SIHLDHVAMVVGLN 288
LF R+ EEG N WNTM GY G K +K + R I +D + ++
Sbjct: 388 LFCRISEEG---NKEAWNTMLKGY---GKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
+CSHIGA+ LGK +H + V+T D+ +V N+LI +Y + GDL A+ +F + +IT
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVIT 500
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
WNAM++ + H ++ ++ LF +M+ E +P+ +T+ ++L C +L+ G+ H YI
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
+ E + L L L+DMYA+ G + +++ +FD+ ++D V + MI GYGM G+ + A+
Sbjct: 561 ETEH-EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAI 619
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
+F++M + +KP +A+L+AC+H+GLV QG+ LF +M Y + P ++HY+C+ DL
Sbjct: 620 ALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDL 678
Query: 529 FGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYY 588
R+G L +A+ + MP+ P +W TL+ +C HG +G A + + P + GYY
Sbjct: 679 LSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYY 738
Query: 589 ILIANMYAAAGCWSELAEVRTYMRNLGVKKAPG 621
I++ANMY+AAG W E R MR GV K G
Sbjct: 739 IMLANMYSAAGKWEEAERAREMMRESGVGKRAG 771
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 227/491 (46%), Gaps = 43/491 (8%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C SL ++ +A +I+ G +N + +L+S YA + + + V + + W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AIE 172
N +I N + +L + ML PD FT P V+ AC ELL G VH ++
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
G + V + V Y+K G L+ A +FD MP+RD
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRD---------------------- 191
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS----IHLDHVAMVVGLN 288
++ W + G++ G +G L L +M ++ + + G
Sbjct: 192 -------------VVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQ 238
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
ACS++GALK G+ +HG AV+ G V++++ + YS+ G+ AY+ F+ + ++ + +
Sbjct: 239 ACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFS 298
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
W ++++ A ++E +F +M ++G P+ V I+ ++ ++ + GK FH +++
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVI 358
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR-DEVTYTAMIRGYGMKGEGQMA 467
R F + N+L+ MY + + A+++F ++ ++ + M++GYG
Sbjct: 359 -RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKC 417
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMAD 527
+ +F ++ I+ D + +V+++CSH G V G+ L +V + I + D
Sbjct: 418 IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT-SLDLTISVVNSLID 476
Query: 528 LFGRAGLLNKA 538
L+G+ G L A
Sbjct: 477 LYGKMGDLTVA 487
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 288/553 (52%), Gaps = 48/553 (8%)
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVI--PDEFTYPSVLKACGELLDCASGVEVHKAI 171
N +I ++ + ++ + YR LRK+ PD FT+ ++ K+C + G+++H I
Sbjct: 46 NSMIKAYLETRQYPDSFALYRD-LRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQI 104
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
++V +V MYAKFGK+ AR+ FD MP R +VSW +IS Y G A
Sbjct: 105 WRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLAS 164
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
KLF++M +++I+N M G++ +G+ A +L +M +
Sbjct: 165 KLFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDEM------------------T 203
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
H + IHG Y D+ A LF M E+ L++WN
Sbjct: 204 HKTVITWTTMIHG--------------------YCNIKDIDAARKLFDAMPERNLVSWNT 243
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGA-EPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
M+ G+ + E LF++M + +P+ VTI SVLP + L G+ HC++ +R
Sbjct: 244 MIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV-QR 302
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
++ + + + ++DMY++ G++ +AKR+FD + + ++ AMI GY + G + AL++
Sbjct: 303 KKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDL 362
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
F M + KPD + M+AV+TAC+H GLV +G+ F M + G+ +IEHY CM DL G
Sbjct: 363 FVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLG 420
Query: 531 RAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYIL 590
RAG L +A+++IT MP++P + ++ + AC + + E K +E++P + G Y+L
Sbjct: 421 RAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVL 480
Query: 591 IANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPL 650
+ N+YAA W + V+ MR KK GC+ +++ S F GDT++PH I+ +
Sbjct: 481 LRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLV 540
Query: 651 MDGLNELMKDAGY 663
+ L M + Y
Sbjct: 541 LGDLLMHMNEEKY 553
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 178/391 (45%), Gaps = 62/391 (15%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARF-------NLFDDACIVTESSSSLEPLHWNM 115
G QLH+Q+ GF + + +V YA+F N FD+ +E S W
Sbjct: 97 GLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVS-------WTA 149
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
LIS ++R CGE LD AS K +
Sbjct: 150 LISGYIR--------------------------------CGE-LDLAS-----KLFDQMP 171
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ ++NA++ + K G + AR LFD M + ++W T+I Y + A KLF+
Sbjct: 172 HVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFD 231
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR--TSIHLDHVAMVVGLNACSHI 293
M E N++ WNTM GGY + ++L +M+ TS+ D V ++ L A S
Sbjct: 232 AMPER----NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
GAL LG+ H R D V A++ MYS+CG++ A +F M EK + +WNAM+
Sbjct: 288 GALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMI 347
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKE-FHCYIMKREQ 412
G+A LF M+ E +P+ +T+ +V+ C ++ G++ FH +M+
Sbjct: 348 HGYALNGNARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFH--VMREMG 404
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
+ + +VD+ R+G + EA+ + ++
Sbjct: 405 LNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 186/619 (30%), Positives = 299/619 (48%), Gaps = 54/619 (8%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + + + +HA +I F + + V + + N D A V E +
Sbjct: 61 ACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATT 120
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACG-----ELLDCASGVEV 167
WN ++S F ++ +A S +R+M ++ PD T +++++ +LL+ V +
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180
Query: 168 HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP--ERDDVSWNTIISCYASRG 225
++V + V N +S Y K G L+ A+ +F+ + +R VSWN++ Y+ G
Sbjct: 181 RLGVDV-----QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
Query: 226 TWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVV 285
+AF L+ M E FK L + S
Sbjct: 236 EAFDAFGLYCLMLRE--------------------EFKPDLSTFINLAAS---------- 265
Query: 286 GLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG 345
C + L G+ IH HA+ G D N I+MYS+ D A +LF M +
Sbjct: 266 ----CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRT 321
Query: 346 LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGK---- 401
++W M+SG+A +DE LF M+ G +P+ VT+ S++ C + +L+ GK
Sbjct: 322 CVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA 381
Query: 402 EFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMK 461
Y KR+ +++ N L+DMY++ G + EA+ +FD+ + VT+T MI GY +
Sbjct: 382 RADIYGCKRDN----VMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALN 437
Query: 462 GEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEH 521
G AL +F +M KP+H+ +AVL AC+HSG + +G F M Y I P ++H
Sbjct: 438 GIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDH 497
Query: 522 YACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMK 581
Y+CM DL GR G L +A E+I M KP +W L+ AC+IH N + E AA L ++
Sbjct: 498 YSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLE 557
Query: 582 PDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSN 641
P + Y+ +AN+YAAAG W A +R+ M+ +KK PG + + V G+ F VG+ +
Sbjct: 558 PQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 617
Query: 642 PHAGEIYPLMDGLNELMKD 660
IY ++GL+ KD
Sbjct: 618 VENEVIYFTLNGLSLFAKD 636
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 227/481 (47%), Gaps = 50/481 (10%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN+ I V VE+L +R+M R P+ FT+P V KAC L D VH +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL- 78
Query: 173 VGSMGWS-LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ S WS +FV A V M+ K ++ A +F+ MPERD +WN ++S + G +AF
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
LF M+ + + + T+ + + +F+ +LKLL M
Sbjct: 139 SLFREMRLNEITPDSVTVMTL----IQSASFEKSLKLLEAM------------------- 175
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME--EKGLITW 349
H +R G DV V N I+ Y +CGDL A ++F+ ++ ++ +++W
Sbjct: 176 -----------HAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSW 224
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI-- 407
N+M ++ + L+ ML E +P+ T ++ C L G+ H +
Sbjct: 225 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
+ +Q E + NT + MY++S A+ +FD +T R V++T MI GY KG+ A
Sbjct: 285 LGTDQDIEAI---NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEA 341
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA- 526
L +F M K KPD V ++++++ C G + G+ + D YG R C A
Sbjct: 342 LALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI-DARADIYG-CKRDNVMICNAL 399
Query: 527 -DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEM--KPD 583
D++ + G +++A++I P K T W T+I ++G + K++++ KP+
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPEK-TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPN 458
Query: 584 H 584
H
Sbjct: 459 H 459
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 193/613 (31%), Positives = 314/613 (51%), Gaps = 40/613 (6%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
CI+ S+S K + A ++ GF I +LV + D A V + S + W
Sbjct: 75 CIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTW 133
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AIE 172
N LI+ +++ EA+ YR M+ V+PDE+T SV KA +L H A+
Sbjct: 134 NSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVI 193
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+G ++FV +ALV MY KFGK A+ + D + E+D V +I Y+ +G EA K
Sbjct: 194 LGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVK 253
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
F+ M E V+ N T A + GN K
Sbjct: 254 AFQSMLVEKVQPNEY---TYASVLISCGNLK----------------------------D 282
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
IG GK IHG V++GF+ + +L+TMY RC + + +F+ +E ++W ++
Sbjct: 283 IGN---GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSL 339
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
+SG R + FR+M+ + +PN T++S L C+ +A + G++ H I+ +
Sbjct: 340 ISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIH-GIVTKYG 398
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
F + L+D+Y + G A+ VFD+L+ D ++ MI Y G G+ AL++FE
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFE 458
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
M ++P+ V +++VL AC++S LV +G LF D I+ +HYACM DL GRA
Sbjct: 459 RMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRA 517
Query: 533 GLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIA 592
G L +A E++T P +W TL+ AC++H + E K+LE++P G IL++
Sbjct: 518 GRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMS 576
Query: 593 NMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDT-SNPHAGEIYPLM 651
N+YA+ G W+ + E+++ M+++ +KK P +WV++ E F GD S+P++ +I +
Sbjct: 577 NLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENL 636
Query: 652 DGLNELMKDAGYI 664
+ L + KD GY+
Sbjct: 637 EELIKKSKDLGYV 649
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 22/299 (7%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC N+ G+Q+H V GFD++ L+ Y + D A +V ++ S ++ +
Sbjct: 377 GCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVIS 436
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
N +I + +N EAL + +M+ + P++ T SVL AC G E+ +
Sbjct: 437 LNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR 496
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIIS-CYASRGTWGEAF 231
+ + + +V + + G+LE A L + D V W T++S C R
Sbjct: 497 KDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHR-----KV 551
Query: 232 KLFERMQ------EEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMV- 284
++ ER+ E G E +I+ M+ Y G + +++ S+M+ + AM
Sbjct: 552 EMAERITRKILEIEPGDEGTLIL---MSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSW 608
Query: 285 VGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE 343
V +N +H + ++ H +L+N+ LI G + +FQ MEE
Sbjct: 609 VEINKETHTF---MAGDLFSHP--NSEQILENLEE-LIKKSKDLGYVEDKSCVFQDMEE 661
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/607 (29%), Positives = 298/607 (49%), Gaps = 50/607 (8%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C N+N + KQLHAQ+I ++ + P+L+S + + A V
Sbjct: 29 CANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N LI +N +A + +M R + D FTYP +LKAC +H IE
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEV--ARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ ++V NAL+ Y++ G L V A LF+ M ERD VSWN+++ G +A
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
+LF+ M + ++I WNTM GY A +L +M + MV+G
Sbjct: 206 RLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMG----- 256
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME--EKGLITW 349
YS+ GD+ A ++F +M K ++TW
Sbjct: 257 ---------------------------------YSKAGDMEMARVMFDKMPLPAKNVVTW 283
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
+++G+A + E L QM+ G + + + S+L C L G H I+K
Sbjct: 284 TIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS-ILK 342
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
R + N L+DMYA+ G + +A VF+ + ++D V++ M+ G G+ G G+ A+
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIE 402
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
+F M + I+PD V +AVL +C+H+GL+ +G F M Y ++P++EHY C+ DL
Sbjct: 403 LFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLL 462
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
GR G L +A +++ MP +P +W L+GACR+H + + L+++ P G Y
Sbjct: 463 GRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYS 522
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYP 649
L++N+YAAA W +A++R+ M+++GV+K G + V++ F V D S+P + +IY
Sbjct: 523 LLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQ 582
Query: 650 LMDGLNE 656
++ L E
Sbjct: 583 MLGSLIE 589
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 283/547 (51%), Gaps = 41/547 (7%)
Query: 150 SVLKACGELLDCASGVEVHKAIEV-GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPE 208
S+L+ CG+ G +H+ +++ G + + N L+ MY K GK A +FD M
Sbjct: 51 SLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHL 110
Query: 209 RDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKL 268
R+ SWN ++S Y G A +F+ M E +++ WNTM GY GN AL
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWF 166
Query: 269 LSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGF--------DVLD---- 315
+ R S I + + L AC L+L ++ HG + GF ++D
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 316 -------------------NVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF 356
++ LI+ Y++ GD+ A LF M EK ++W A+++G+
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
+ LFR+M+ G +P T +S L A IA+L+HGKE H Y M R +
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGY-MIRTNVRPN 345
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
++ ++L+DMY++SG + ++RVF + D V + MI G G AL + ++M
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI 405
Query: 476 KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLL 535
KF+++P+ +V +L ACSHSGLV +G F+ M +GI+P EHYAC+ DL GRAG
Sbjct: 406 KFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCF 465
Query: 536 NKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMY 595
+ I MP++P +W ++G CRIHGN LG+ AA +L+++ P+ S YIL++++Y
Sbjct: 466 KELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIY 525
Query: 596 AAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHA--GEIYPLMDG 653
A G W + ++R M+ V K +W+++ + F V D S+ HA EIY ++
Sbjct: 526 ADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHN 585
Query: 654 LNELMKD 660
L ++++
Sbjct: 586 LAAVIEE 592
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 206/481 (42%), Gaps = 55/481 (11%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQ-NTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + SL GK +H + GF + NT++ L+ Y + DAC V +
Sbjct: 56 CGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYS 115
Query: 113 WNMLISMFVRNELFV-------------------------------EALSAYRKMLRKQV 141
WN ++S +V++ + V EAL Y++ R +
Sbjct: 116 WNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGI 175
Query: 142 IPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARH 201
+EF++ +L AC + + H + V ++ + +++ YAK G++E A+
Sbjct: 176 KFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKR 235
Query: 202 LFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGN 261
FD M +D W T+IS YA G A KLF M E+ N + W + GY+ G+
Sbjct: 236 CFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGS 291
Query: 262 FKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNA 320
AL L +M + + L A + I +L+ GKEIHG+ +RT V ++
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 321 LITMYSRCGDLGHAYMLFQRMEEK-GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEP 379
LI MYS+ G L + +F+ ++K + WN M+S A + + M+ +P
Sbjct: 352 LIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQP 411
Query: 380 NYVTIASVLPLCARIANLQHGKEF-------HCYIMKREQFKEYLLLWNTLVDMYARSGK 432
N T+ +L C+ ++ G + H + +E + L+D+ R+G
Sbjct: 412 NRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYA-------CLIDLLGRAGC 464
Query: 433 VLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLT 491
E R + + D+ + A++ + G ++ +E+ K+ P+ A +L+
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADEL--IKLDPESSAPYILLS 522
Query: 492 A 492
+
Sbjct: 523 S 523
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 151/363 (41%), Gaps = 67/363 (18%)
Query: 266 LKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDN-VRNALITM 324
L+ L+Q + D +A + L C +LK GK IH H TGF + + N LI M
Sbjct: 34 LESLTQQGIRLPFDLLASL--LQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGM 91
Query: 325 YSRCGD-------------------------------LGHAYMLFQRMEEKGLITWNAML 353
Y +CG L A ++F M E+ +++WN M+
Sbjct: 92 YMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMV 151
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
G+A + E + +++ G + N + A +L C + LQ ++ H ++ F
Sbjct: 152 IGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV-AGF 210
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD-------------------------- 447
++L +++D YA+ G++ AKR FD +T +D
Sbjct: 211 LSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCE 270
Query: 448 -----EVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQG 502
V++TA+I GY +G G AL++F +M +KP+ + L A + + G
Sbjct: 271 MPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHG 330
Query: 503 QVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACR 562
+ + M+ + P + + D++ ++G L ++ + K W T+I A
Sbjct: 331 KEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALA 389
Query: 563 IHG 565
HG
Sbjct: 390 QHG 392
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 232/370 (62%), Gaps = 2/370 (0%)
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSG 355
++LG+ IH +R+GF L V+N+L+ +Y+ CGD+ AY +F +M EK L+ WN++++G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKE 415
FA + +E L+ +M +G +P+ TI S+L CA+I L GK H Y++K
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTR 122
Query: 416 YLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
L N L+D+YAR G+V EAK +FD + ++ V++T++I G + G G+ A+ +F+ M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 476 KFK-IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGL 534
+ + P + V +L ACSH G+V +G F+ M ++Y I PRIEH+ CM DL RAG
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 535 LNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANM 594
+ KA E I MP +P +W TL+GAC +HG++ L E+A ++L+++P+HSG Y+L++NM
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 595 YAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGL 654
YA+ WS++ ++R M GVKK PG + V+VG F +GD S+P + IY + +
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Query: 655 NELMKDAGYI 664
++ GY+
Sbjct: 363 TGRLRSEGYV 372
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 150/328 (45%), Gaps = 38/328 (11%)
Query: 158 LLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTI 217
+ D G +H + G ++V N+L+ +YA G + A +FD MPE+D V+WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 218 ISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIH 277
I+ +A G EA L+ M +G I
Sbjct: 61 INGFAENGKPEEALALYTEMNSKG----------------------------------IK 86
Query: 278 LDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYML 337
D +V L+AC+ IGAL LGK +H + ++ G + N L+ +Y+RCG + A L
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 338 FQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLH-EGAEPNYVTIASVLPLCARIAN 396
F M +K ++W +++ G A E LF+ M EG P +T +L C+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 397 LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVT-YTAMI 455
++ G E+ + + + + + + +VD+ AR+G+V +A S+ + V + ++
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 456 RGYGMKGEGQMALNIFEEMCKFKIKPDH 483
+ G+ +A F + +++P+H
Sbjct: 267 GACTVHGDSDLAE--FARIQILQLEPNH 292
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 151/344 (43%), Gaps = 45/344 (13%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+ +H+ VI GF + L+ YA A V + + + WN +I+ F
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGSMGWSLF 181
N EAL+ Y +M K + PD FT S+L AC ++ G VH I+VG + +L
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG-LTRNLH 125
Query: 182 VHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEG 241
N L+ +YA+ G++E A+ LFD M +++ VSW ++I A G EA +LF+ M+
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME--- 182
Query: 242 VEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKE 301
+ +G L + V L ACSH G +K G E
Sbjct: 183 -------------------STEGLLPC-----------EITFVGILYACSHCGMVKEGFE 212
Query: 302 IHGHAVRTGFDVLDNVRN--ALITMYSRCGDLGHAYMLFQRME-EKGLITWNAMLSGFAH 358
+ +R + + + + ++ + +R G + AY + M + ++ W +L
Sbjct: 213 -YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 271
Query: 359 MDRVDEVSFLFRQMLHEGAEPN----YVTIASVLPLCARIANLQ 398
D F Q+L EPN YV ++++ R +++Q
Sbjct: 272 HGDSDLAEFARIQILQ--LEPNHSGDYVLLSNMYASEQRWSDVQ 313
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 196/619 (31%), Positives = 311/619 (50%), Gaps = 60/619 (9%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
CI+VN L +Q+ AQ++ ++ ++P+ V FN VTE EP H+
Sbjct: 47 CISVNQL---RQIQAQMLLHSVEKPNFLIPKAVEL-GDFNYSSFLFSVTE-----EPNHY 97
Query: 114 NM------LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEV 167
+ L + + +E ALS YR+M + PD+FTY V AC +L + G V
Sbjct: 98 SFNYMIRGLTNTWNDHE---AALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 168 HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW 227
H ++ + + ++++L+ MYAK G++
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQV------------------------------- 183
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVG 286
G A KLF+ E E + + WN+M GY AG K A+ L +M D +V
Sbjct: 184 GYARKLFD----EITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSM 239
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
L ACSH+G L+ G+ + A+ + + + LI+MY +CGDL A +F +M +K
Sbjct: 240 LGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDR 299
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
+ W AM++ ++ + E LF +M G P+ T+++VL C + L+ GK+ +
Sbjct: 300 VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETH 359
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM 466
+ + + + LVDMY + G+V EA RVF+++ ++E T+ AMI Y +G +
Sbjct: 360 ASEL-SLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKE 418
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
AL +F+ M + P + + VL+AC H+GLV QG F EM +G++P+IEHY +
Sbjct: 419 ALLLFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNII 475
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKP-DHS 585
DL RAG+L++A E + R P KP M A ++GAC + + E A L+EMK ++
Sbjct: 476 DLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNA 535
Query: 586 GYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVG-DTSNPHA 644
G Y++ +N+ A W E A++R MR+ GV K PGC+W+++ GE F G D
Sbjct: 536 GNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGR 595
Query: 645 GEIYPLMDGLNELMKDAGY 663
+ L D L E MK Y
Sbjct: 596 EDSGSLFDLLVEEMKRERY 614
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/564 (30%), Positives = 300/564 (53%), Gaps = 38/564 (6%)
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNEL 125
+H I+ GF N + L+ Y + A + + S + + W +IS F R
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 126 FVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNA 185
+AL +++M R+ V ++FTY SVLK+C +L G+++H ++E G+ +L V +A
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 186 LVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
L+S+YA+ GK+E AR FD+M ERD VSWN +I Y + +F LF+ M EG + +
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGH 305
+ ++ +R SI + L++ E+HG
Sbjct: 214 CFTFGSL-------------------LRASI---------------VVKCLEIVSELHGL 239
Query: 306 AVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEV 365
A++ GF + +L+ Y +CG L +A+ L + +++ L++ A+++GF+ +
Sbjct: 240 AIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSD 299
Query: 366 SF-LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLV 424
+F +F+ M+ + + V ++S+L +C IA++ G++ H + +K Q + + L N+L+
Sbjct: 300 AFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLI 359
Query: 425 DMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHV 484
DMYA+SG++ +A F+ + +D ++T++I GYG G + A++++ M +IKP+ V
Sbjct: 360 DMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDV 419
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
+++L+ACSH+G G ++ M++ +GI R EH +C+ D+ R+G L +A +I
Sbjct: 420 TFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRS 479
Query: 545 MP--YKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWS 602
+ + W + ACR HGN L + AA +LL M+P YI +A++YAA G W
Sbjct: 480 KEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWD 539
Query: 603 ELAEVRTYMRNLG-VKKAPGCAWV 625
R M+ G KAPG + V
Sbjct: 540 NALNTRKLMKESGSCNKAPGYSLV 563
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 190/392 (48%), Gaps = 50/392 (12%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C ++ L G Q+H V N I+ L+S YAR ++A + +S + + W
Sbjct: 123 CKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSW 182
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGV-EVHK-AI 171
N +I + N + S ++ ML + PD FT+ S+L+A ++ C V E+H AI
Sbjct: 183 NAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA-SIVVKCLEIVSELHGLAI 241
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW-GEA 230
++G G S + +LV+ Y K G L A L + +RD +S +I+ ++ + +A
Sbjct: 242 KLG-FGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDA 300
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
F +F+ M +R +D V + L C
Sbjct: 301 FDIFKDM----------------------------------IRMKTKMDEVVVSSMLKIC 326
Query: 291 SHIGALKLGKEIHGHAVRTG---FDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
+ I ++ +G++IHG A+++ FDV + N+LI MY++ G++ A + F+ M+EK +
Sbjct: 327 TTIASVTIGRQIHGFALKSSQIRFDVA--LGNSLIDMYAKSGEIEDAVLAFEEMKEKDVR 384
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
+W ++++G+ ++ L+ +M HE +PN VT S+L C+ + G + + +
Sbjct: 385 SWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTM 444
Query: 408 MKR---EQFKEYLLLWNTLVDMYARSGKVLEA 436
+ + E +E+L + ++DM ARSG + EA
Sbjct: 445 INKHGIEAREEHL---SCIIDMLARSGYLEEA 473
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 286 GLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG 345
L CS+ K IHG+++ GF +++ LI +Y + GD+ HA LF R+ ++
Sbjct: 18 ALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRD 77
Query: 346 LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHC 405
+++W AM+S F+ + LF++M E + N T SVL C + L+ G + H
Sbjct: 78 VVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG 137
Query: 406 YIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQ 465
+ ++ L++ + L+ +YAR GK+ EA+ FDS+ RD V++ AMI GY
Sbjct: 138 SV-EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACAD 196
Query: 466 MALNIFEEMCKFKIKPDHVAMVAVLTA 492
+ ++F+ M KPD ++L A
Sbjct: 197 TSFSLFQLMLTEGKKPDCFTFGSLLRA 223
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 180/590 (30%), Positives = 308/590 (52%), Gaps = 41/590 (6%)
Query: 85 LVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPD 144
+VS Y L +A + + S + WN L+S +++N + VEA + + M + V+
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV-- 111
Query: 145 EFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFG------KLEV 198
++ +++K G + + G E S+ W + N VS FG +++
Sbjct: 112 --SWTAMVK--GYMQEGMVG-------EAESLFWRMPERNE-VSWTVMFGGLIDDGRIDK 159
Query: 199 ARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLH 258
AR L+D MP +D V+ +I G EA +F+ M+E N++ W TM GY
Sbjct: 160 ARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQ 215
Query: 259 AGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDN-- 316
A KL M + +M++G G ++ +E F+V+
Sbjct: 216 NNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS---GRIEDAEEF--------FEVMPMKP 264
Query: 317 --VRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLH 374
NA+I + G++ A +F ME++ TW M+ + E LF QM
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 375 EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVL 434
+G P++ ++ S+L +CA +A+LQ+G++ H +++ R QF + + + + L+ MY + G+++
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLV-RCQFDDDVYVASVLMTMYVKCGELV 383
Query: 435 EAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
+AK VFD + +D + + ++I GY G G+ AL IF EM P+ V ++A+LTACS
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 495 HSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMW 554
++G + +G +F+ M + + P +EHY+C D+ GRAG ++KA E+I M KP +W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 555 ATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNL 614
L+GAC+ H L E AA KL E +PD++G Y+L++++ A+ W ++A VR MR
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
Query: 615 GVKKAPGCAWVDVGGEFSPFFVGDTSN-PHAGEIYPLMDGLNELMKDAGY 663
V K PGC+W++VG + F G N P I +++ + L+++AGY
Sbjct: 564 NVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGY 613
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 185/401 (46%), Gaps = 33/401 (8%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N++VS Y G + AR LFD M ER+ VSWN ++S Y EA +FE M E
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPER--- 108
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
N++ W M GY+ G A L +M + M GL I ++ K
Sbjct: 109 -NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGL-----IDDGRIDKARK 162
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
+ + DV+ + +I R G + A ++F M E+ ++TW M++G+ +RVD
Sbjct: 163 LYDMMPVKDVVASTN--MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220
Query: 364 EVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTL 423
LF +++ E E ++ ++ L RI + + F MK ++ N +
Sbjct: 221 VARKLF-EVMPEKTEVSWTSMLLGYTLSGRIEDAEEF--FEVMPMKP------VIACNAM 271
Query: 424 VDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDH 483
+ + G++ +A+RVFD + RD T+ MI+ Y KG AL++F +M K ++P
Sbjct: 272 IVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 484 VAMVAVLTACSHSGLVAQGQVLFQEMV----DDYGIIPRIEHYACMADLFGRAGLLNKAK 539
+++++L+ C+ + G+ + +V DD + + + ++ + G L KAK
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV-----LMTMYVKCGELVKAK 386
Query: 540 EIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEM 580
+ R K MW ++I HG LGE A EM
Sbjct: 387 LVFDRFSSKDI-IMWNSIISGYASHG---LGEEALKIFHEM 423
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 205/472 (43%), Gaps = 52/472 (11%)
Query: 76 DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRK 135
++N + LVS Y + + +A V E + W ++ +++ + EA S + +
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 136 MLRKQVIPDEFTYPSV-----LKACGELLD-----------------CASG-VEVHKAIE 172
M + + + + + +L D C G V+ + I
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
++ +++ Y + +++VAR LF+ MPE+ +VSW +++ Y G +A +
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEE 255
Query: 233 LFERMQEEGV---------------------------EMNIIIWNTMAGGYLHAGNFKGA 265
FE M + V + + W M Y G A
Sbjct: 256 FFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEA 315
Query: 266 LKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITM 324
L L +QM + + +++ L+ C+ + +L+ G+++H H VR FD V + L+TM
Sbjct: 316 LDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTM 375
Query: 325 YSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTI 384
Y +CG+L A ++F R K +I WN+++SG+A +E +F +M G PN VT+
Sbjct: 376 YVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTL 435
Query: 385 ASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT 444
++L C+ L+ G E + + + ++ VDM R+G+V +A + +S+T
Sbjct: 436 IAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT 495
Query: 445 RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHS 496
+ + T + G K ++ L F+ +PD+ +L++ + S
Sbjct: 496 IKPDATVWGALLG-ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINAS 546
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + SL G+Q+HA ++ FD + + L++ Y + A +V + SS + + W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +IS + + L EAL + +M +P++ T ++L AC G+E+ +++E
Sbjct: 401 NSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMES 460
Query: 174 GSMGWSLFVH-NALVSMYAKFGKLEVARHLFDNMPERDDVS-WNTII-SCYA-SRGTWGE 229
H + V M + G+++ A L ++M + D + W ++ +C SR E
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAE 520
Query: 230 --AFKLFE 235
A KLFE
Sbjct: 521 VAAKKLFE 528
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 39/264 (14%)
Query: 322 ITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNY 381
I+ SR G + A F ++ K + +WN+++SG+ E RQ+ E +E N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEA----RQLFDEMSERNV 79
Query: 382 VTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFD 441
V+ ++ I N + + + + E+ ++ W +V Y + G V EA+ +F
Sbjct: 80 VSWNGLVS--GYIKNRMIVEARNVFELMPER---NVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 442 SLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQ 501
+ R+EV++T M G G A +++ M +K D VA ++ G V +
Sbjct: 135 RMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM---PVK-DVVASTNMIGGLCREGRVDE 190
Query: 502 GQVLFQEMVDD------------------------YGIIPRIEHYACMADLFGR--AGLL 535
+++F EM + + ++P + + L G +G +
Sbjct: 191 ARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRI 250
Query: 536 NKAKEIITRMPYKPTPAMWATLIG 559
A+E MP KP A A ++G
Sbjct: 251 EDAEEFFEVMPMKPVIACNAMIVG 274
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 392 ARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTY 451
+RI + ++F + QFK + WN++V Y +G EA+++FD ++ R+ V++
Sbjct: 28 SRIGKINEARKFFDSL----QFKA-IGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSW 82
Query: 452 TAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVD 511
++ GY A N+FE M + + V+ A++ G+V + + LF M +
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNV----VSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 512 DYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACR 562
+ + + D G ++KA+++ MP K A + G CR
Sbjct: 139 RNEVSWTVMFGGLIDD-----GRIDKARKLYDMMPVKDVVASTNMIGGLCR 184
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 271/516 (52%), Gaps = 83/516 (16%)
Query: 196 LEVARHLFDNMPERDDVSWNTIISCYASRGTWGE--AFKLF-ERMQEEGVEMNIIIWNTM 252
L+ A +F+ MP+R+ SWNTII ++ A LF E M +E VE N + ++
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 253 AGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFD 312
L AC+ G ++ GK+IHG A++ GF
Sbjct: 135 ----------------------------------LKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 313 ----VLDN-VR----------------------------------------NALITMYSR 327
V+ N VR N +I Y R
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 328 CGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASV 387
GD A MLF +M ++ +++WN M+SG++ + +FR+M PNYVT+ SV
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 388 LPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD 447
LP +R+ +L+ G+ H Y + + +L + L+DMY++ G + +A VF+ L R +
Sbjct: 281 LPAISRLGSLELGEWLHLY-AEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 448 EVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQ 507
+T++AMI G+ + G+ A++ F +M + ++P VA + +LTACSH GLV +G+ F
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 508 EMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNT 567
+MV G+ PRIEHY CM DL GR+GLL++A+E I MP KP +W L+GACR+ GN
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Query: 568 VLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDV 627
+G+ A L++M P SG Y+ ++NMYA+ G WSE++E+R M+ ++K PGC+ +D+
Sbjct: 460 EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDI 519
Query: 628 GGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
G F V D S+P A EI ++ +++ ++ AGY
Sbjct: 520 DGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 239/518 (46%), Gaps = 67/518 (12%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNL----FDDACIVTESSSSLE 109
C + LS Q+HA I G ++T+ ++ F A +L D A +
Sbjct: 33 CRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 110 PLHWNMLISMFVRNE--LFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASGVE 166
WN +I F ++ + A++ + +M+ + + P+ FT+PSVLKAC + G +
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 167 VHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLF-DNMPERDDVS------------ 213
+H G FV + LV MY G ++ AR LF N+ E+D V
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 214 -WNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM 272
WN +I Y G A LF++M++ V + WNTM GY G FK A+++ +M
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSV----VSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 273 RT-SIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDL 331
+ I ++V +V L A S +G+L+LG+ +H +A +G + D + +ALI MYS+CG +
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 332 GHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLC 391
A +F+R+ + +ITW+AM++GFA + + F +M G P+ V ++L C
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Query: 392 ARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTY 451
+ ++ G+ + ++ + + + + +VD+ RSG + EA+
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE-------------- 431
Query: 452 TAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVD 511
E + IKPD V A+L AC G V G+ + ++D
Sbjct: 432 --------------------EFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMD 471
Query: 512 DYGIIPRIE-HYACMADLFGRAGLLNKAKEIITRMPYK 548
++P Y +++++ G ++ E+ RM K
Sbjct: 472 ---MVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 279/561 (49%), Gaps = 41/561 (7%)
Query: 109 EPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH 168
+ + +N LIS + A+ +++M + D FT ++ AC + +D ++H
Sbjct: 104 DTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLH 161
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPE-RDDVSWNTIISCYASRGTW 227
G V+NA V+ Y+K G L A +F M E RD+VSWN++I Y
Sbjct: 162 CFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEG 221
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGL 287
+A L++ M FKG +D + L
Sbjct: 222 AKALALYKEMI-----------------------FKG-----------FKIDMFTLASVL 247
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAY---MLFQRMEEK 344
NA + + L G++ HG ++ GF +V + LI YS+CG Y +FQ +
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 345 GLITWNAMLSGFAHMDRVDEVSFL-FRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
L+ WN M+SG++ + + E + FRQM G P+ + V C+ +++ K+
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGE 463
H +K + + N L+ +Y +SG + +A+ VFD + + V++ MI+GY G
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 464 GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA 523
G AL +++ M I P+ + VAVL+AC+H G V +GQ F M + + I P EHY+
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 524 CMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPD 583
CM DL GRAG L +A+ I MPYKP WA L+GACR H N L E AA +L+ M+P
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPL 547
Query: 584 HSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPH 643
+ Y+++ANMYA A W E+A VR MR ++K PGC+W++V + F D S+P
Sbjct: 548 AATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPM 607
Query: 644 AGEIYPLMDGLNELMKDAGYI 664
E+ ++ + + MK GY+
Sbjct: 608 IREVNEYLEEMMKKMKKVGYV 628
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 197/402 (49%), Gaps = 14/402 (3%)
Query: 151 VLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERD 210
+LK+ E D +G +H + S ++ N V++Y+K G+L AR F + E +
Sbjct: 15 LLKSVAER-DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 211 DVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLS 270
S+N I+ YA A +LF+ + + + + +NT+ GY A A+ L
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQP----DTVSYNTLISGYADARETFAAMVLFK 129
Query: 271 QMRT-SIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCG 329
+MR +D + + AC + L K++H +V GFD +V NA +T YS+ G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 330 DLGHAYMLFQRMEE-KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVL 388
L A +F M+E + ++WN+M+ + + L+++M+ +G + + T+ASVL
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 389 PLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSG---KVLEAKRVFDSLTR 445
+ +L G++FH ++K F + + + L+D Y++ G + ++++VF +
Sbjct: 248 NALTSLDHLIGGRQFHGKLIK-AGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 446 RDEVTYTAMIRGYGMKGE-GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQV 504
D V + MI GY M E + A+ F +M + +PD + V V +ACS+ +Q +
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 505 LFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMP 546
+ + + RI + L+ ++G L A+ + RMP
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 144/306 (47%), Gaps = 43/306 (14%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFD---DACIVTESSSSLEPLH 112
+++ L G+Q H ++I GF QN+ + L+ FY++ D D+ V + S + +
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 113 WNMLISMFVRN-ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-A 170
WN +IS + N EL EA+ ++R+M R PD+ ++ V AC L + ++H A
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
I+ + V+NAL+S+Y K G L+ AR +FD MPE + VS+N +I YA G EA
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
L++RM + G+ N I + V L+AC
Sbjct: 432 LLLYQRMLDSGIAPNKITF----------------------------------VAVLSAC 457
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLFQRMEEK-GLI 347
+H G + G+E + + ++ F + + +I + R G L A M K G +
Sbjct: 458 AHCGKVDEGQE-YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSV 516
Query: 348 TWNAML 353
W A+L
Sbjct: 517 AWAALL 522
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 3/169 (1%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPR-LVSFYARFNLFDDACIVTESSSSLEPL 111
C N++S S KQ+H I N I + L+S Y + DA V + L +
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAV 413
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
+N +I + ++ EAL Y++ML + P++ T+ +VL AC G E +
Sbjct: 414 SFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTM 473
Query: 172 -EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERD-DVSWNTII 218
E + ++ ++ + + GKLE A D MP + V+W ++
Sbjct: 474 KETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 290/564 (51%), Gaps = 51/564 (9%)
Query: 101 VTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLD 160
+T+ S + N +I+ VR+ AL + M K I T+ S+L G D
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTI----TWNSLL--IGISKD 105
Query: 161 CASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISC 220
+ +E H+ + F +N ++S Y + E A+ FD MP +D SWNT+I+
Sbjct: 106 PSRMMEAHQLFDEIPEP-DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITG 164
Query: 221 YASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDH 280
YA RG +A +LF M E+ N + WN M GY+ G+ + A H
Sbjct: 165 YARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKA----------SHFFK 210
Query: 281 VAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQR 340
VA V G+ A + A+IT Y + + A +F+
Sbjct: 211 VAPVRGVVAWT----------------------------AMITGYMKAKKVELAEAMFKD 242
Query: 341 ME-EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQH 399
M K L+TWNAM+SG+ R ++ LFR ML EG PN ++S L C+ ++ LQ
Sbjct: 243 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL 302
Query: 400 GKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYG 459
G++ H + K + L +L+ MY + G++ +A ++F+ + ++D V + AMI GY
Sbjct: 303 GRQIHQIVSKSTLCNDVTAL-TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI 519
G AL +F EM KI+PD + VAVL AC+H+GLV G F+ MV DY + P+
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 520 EHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLE 579
+HY CM DL GRAG L +A ++I MP++P A++ TL+GACR+H N L E+AA KLL+
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQ 481
Query: 580 MKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDT 639
+ ++ Y+ +AN+YA+ W ++A VR M+ V K PG +W+++ + F D
Sbjct: 482 LNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDR 541
Query: 640 SNPHAGEIYPLMDGLNELMKDAGY 663
+P I+ + L + MK AGY
Sbjct: 542 IHPELDSIHKKLKELEKKMKLAGY 565
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 169/390 (43%), Gaps = 44/390 (11%)
Query: 59 SLSPGKQLHA-QVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLI 117
S P + + A Q+ + +T ++S Y R F+ A + + WN +I
Sbjct: 103 SKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMI 162
Query: 118 SMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMG 177
+ + R +A + M+ K +
Sbjct: 163 TGYARRGEMEKARELFYSMMEK----------------------------------NEVS 188
Query: 178 WSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERM 237
W NA++S Y + G LE A H F P R V+W +I+ Y A +F+ M
Sbjct: 189 W-----NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDM 243
Query: 238 QEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGAL 296
V N++ WN M GY+ + LKL M I + + L CS + AL
Sbjct: 244 T---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300
Query: 297 KLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF 356
+LG++IH ++ +LI+MY +CG+LG A+ LF+ M++K ++ WNAM+SG+
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
A D+ LFR+M+ P+++T +VL C + G + +++ + +
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ 420
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLTRR 446
+ +VD+ R+GK+ EA ++ S+ R
Sbjct: 421 PDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 109/245 (44%), Gaps = 25/245 (10%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC +++L G+Q+H V + L L+S Y + DA + E + +
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN +IS + ++ +AL +R+M+ ++ PD T+ +VL AC A V + A
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH----AGLVNIGMAY- 407
Query: 173 VGSMGWSLFV------HNALVSMYAKFGKLEVARHLFDNMPERDDVS-WNTII-SCYASR 224
SM V + +V + + GKLE A L +MP R + + T++ +C +
Sbjct: 408 FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHK 467
Query: 225 GTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNF---KGALKLLSQMRTSIHLDHV 281
+L E E+ +++N + A GY+ N K + ++++R + +V
Sbjct: 468 NV-----ELAEFAAEKLLQLN----SQNAAGYVQLANIYASKNRWEDVARVRKRMKESNV 518
Query: 282 AMVVG 286
V G
Sbjct: 519 VKVPG 523
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 286/554 (51%), Gaps = 19/554 (3%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI- 171
+ +I+ + R+ V+AL+ + +M + V+ ++ S++ C E D + V++ +
Sbjct: 69 YTKMITGYTRSNRLVDALNLFDEMPVRDVV----SWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
E + W+ V+ S GK++ A LF MP +D +WN+++ Y G +A
Sbjct: 125 ERSVVSWTAMVNGCFRS-----GKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDAL 179
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNAC 290
KLF++M + N+I W TM G AL L M R I + AC
Sbjct: 180 KLFKQMPGK----NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
++ A +G ++HG ++ GF + V +LIT Y+ C +G + +F + + W
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT 295
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
A+LSG++ + ++ +F ML PN T AS L C+ + L GKE H +K
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
+ + N+LV MY+ SG V +A VF + ++ V++ ++I G G G+ A I
Sbjct: 356 -GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPR-IEHYACMADLF 529
F +M + +PD + +L+ACSH G + +G+ LF M I R I+HY CM D+
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDIL 474
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
GR G L +A+E+I RM KP +W L+ ACR+H + GE AA + + S Y+
Sbjct: 475 GRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYP 649
L++N+YA+AG WS ++++R M+ G+ K PG +WV + G+ FF GD PH IY
Sbjct: 535 LLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYE 592
Query: 650 LMDGLNELMKDAGY 663
++ L E +K+ GY
Sbjct: 593 KLEFLREKLKELGY 606
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 42/414 (10%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC + ++L Q+ ++T +V Y +F DDA + + +
Sbjct: 137 GCFRSGKVDQAERLFYQMPV----KDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVIS 192
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W +I +NE EAL ++ MLR + + V+ AC G++VH I
Sbjct: 193 WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ +V +L++ YA ++ +R +FD
Sbjct: 253 KLGFLYEEYVSASLITFYANCKRIGDSRKVFD---------------------------- 284
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACS 291
E V + +W + GY + AL + S M R SI + GLN+CS
Sbjct: 285 -------EKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
+G L GKE+HG AV+ G + V N+L+ MYS G++ A +F ++ +K +++WN+
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNS 397
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR- 410
++ G A R +F QM+ EP+ +T +L C+ L+ G++ Y+
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGI 457
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-TRRDEVTYTAMIRGYGMKGE 463
+ + +VD+ R GK+ EA+ + + + + +E+ + A++ M +
Sbjct: 458 NHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSD 511
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 410 REQFKE----YLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQ 465
RE F + ++ L+ ++ Y RS ++++A +FD + RD V++ +MI G G+
Sbjct: 55 REVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMN 114
Query: 466 MALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACM 525
A+ +F+EM + + V+ A++ C SG V Q + LF +M + + M
Sbjct: 115 TAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMP-----VKDTAAWNSM 165
Query: 526 ADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGE 571
+ + G ++ A ++ +MP K + W T+I C + N GE
Sbjct: 166 VHGYLQFGKVDDALKLFKQMPGKNVIS-WTTMI--CGLDQNERSGE 208
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 394 IANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTA 453
I+++ HGK + + + E +L+ N L+ S ++ EA+ VF+ + YT
Sbjct: 17 ISHVIHGKCYRSFSVTVEFQNREVLICNHLL-----SRRIDEAREVFNQVPSPHVSLYTK 71
Query: 454 MIRGYGMKGEGQMALNIFEEMCKFKIKP--DHVAMVAVLTACSHSGLVAQGQVLFQEMVD 511
MI GY ALN+F+EM P D V+ ++++ C G + LF EM +
Sbjct: 72 MITGYTRSNRLVDALNLFDEM------PVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 512 DYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
+ + M + R+G +++A+ + +MP K T A W +++
Sbjct: 126 -----RSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAA-WNSMV 166
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 307/609 (50%), Gaps = 53/609 (8%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C+ G QL + V+ G + + ++ ++ Y+R F A V + S + + W
Sbjct: 184 CVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISW 243
Query: 114 NMLISMFVRNELF-VEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
N L+S + F EA+ +R M+R+ V D ++ SV+ C D ++H
Sbjct: 244 NSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI 303
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
L V N L+S Y+K G LE + +F M ER+ VSW T+IS +A
Sbjct: 304 KRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVS 358
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
+F M+ +GV N V V +NA
Sbjct: 359 IFLNMRFDGVYPN----------------------------------EVTFVGLINAVKC 384
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+K G +IHG ++TGF +V N+ IT+Y++ L A F+ + + +I+WNAM
Sbjct: 385 NEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAM 444
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAE--PNYVTIASVLPLCARIANL--QHGKEFHCYIM 408
+SGFA E +F L AE PN T SVL A ++ + G+ H +++
Sbjct: 445 ISGFAQNGFSHEALKMF---LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL 501
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
K ++ + L+DMYA+ G + E+++VF+ ++++++ +T++I Y G+ + +
Sbjct: 502 KL-GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVM 560
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
N+F +M K + PD V ++VLTAC+ G+V +G +F M++ Y + P EHY+CM D+
Sbjct: 561 NLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDM 620
Query: 529 FGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYY 588
GRAG L +A+E+++ +P P +M +++G+CR+HGN +G A +EMKP+ SG Y
Sbjct: 621 LGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSY 680
Query: 589 ILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGG-----EFSPFFVGDTSNPH 643
+ + N+YA W + AE+R MR V K G +W+DVG F GD S+P
Sbjct: 681 VQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPK 740
Query: 644 AGEIYPLMD 652
+ EIY +++
Sbjct: 741 SDEIYRMVE 749
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 240/513 (46%), Gaps = 55/513 (10%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISM 119
L G Q+H + GF + ++ Y + FD+A + E+ + + WN ++S
Sbjct: 92 LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG 151
Query: 120 FVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC----GELLDCASGVEVHKAIEVGS 175
F N++ AL+ +M V+ D FTY + L C G LL G+++ +
Sbjct: 152 FDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL----GLQLQSTVVKTG 204
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ L V N+ ++MY++ G AR +FD M +D +SWN+++S + GT+G FE
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFG-----FE 259
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGA 295
++I+ M MR + LDHV+ + C H
Sbjct: 260 A---------VVIFRDM-------------------MREGVELDHVSFTSVITTCCHETD 291
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSG 355
LKL ++IHG ++ G++ L V N L++ YS+CG L +F +M E+ +++W M+S
Sbjct: 292 LKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS 351
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKE 415
++ D VS +F M +G PN VT ++ ++ G + H +K F
Sbjct: 352 ----NKDDAVS-IFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKT-GFVS 405
Query: 416 YLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
+ N+ + +YA+ + +AK+ F+ +T R+ +++ AMI G+ G AL +F
Sbjct: 406 EPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA 465
Query: 476 KFKIKPDHVAMVAVLTACSHSG--LVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAG 533
+ P+ +VL A + + V QGQ ++ G+ + + D++ + G
Sbjct: 466 A-ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL-KLGLNSCPVVSSALLDMYAKRG 523
Query: 534 LLNKAKEIITRMPYKPTPAMWATLIGACRIHGN 566
+++++++ M K +W ++I A HG+
Sbjct: 524 NIDESEKVFNEMSQK-NQFVWTSIISAYSSHGD 555
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 142/285 (49%), Gaps = 9/285 (3%)
Query: 277 HLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYM 336
H+D V + + L AC G LK G +IHG + +GF V NA++ MY + G +A
Sbjct: 75 HMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALC 132
Query: 337 LFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIAN 396
+F+ + + +++WN +LSGF D ++F+ R M G + T ++ L C
Sbjct: 133 IFENLVDPDVVSWNTILSGFD--DNQIALNFVVR-MKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 397 LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIR 456
G + ++K + L++ N+ + MY+RSG A+RVFD ++ +D +++ +++
Sbjct: 190 FLLGLQLQSTVVKT-GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLS 248
Query: 457 GYGMKGE-GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGI 515
G +G G A+ IF +M + ++ DHV+ +V+T C H + + + + G
Sbjct: 249 GLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQI-HGLCIKRGY 307
Query: 516 IPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGA 560
+E + + + G+L K + +M + + W T+I +
Sbjct: 308 ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVS-WTTMISS 351
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/604 (28%), Positives = 299/604 (49%), Gaps = 43/604 (7%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C ++++ G+ LHA + + + L+ Y R D +C V +
Sbjct: 117 ACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVT 176
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W +I+ V + E L+ + +M R + + D +T+ LKAC L G +H +
Sbjct: 177 WTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVI 236
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
V +L V N+L +MY + G+++ LF+NM ERD VSW ++I Y G +A +
Sbjct: 237 VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVE 296
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
F +M+ V N + +M +AC+
Sbjct: 297 TFIKMRNSQVPPNEQTFASM----------------------------------FSACAS 322
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+ L G+++H + + G + +V N+++ MYS CG+L A +LFQ M + +I+W+ +
Sbjct: 323 LSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTI 382
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH----CYIM 408
+ G+ +E F M G +P +AS+L + +A ++ G++ H C+ +
Sbjct: 383 IGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGL 442
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
++ + ++L++MY++ G + EA +F R D V+ TAMI GY G+ + A+
Sbjct: 443 EQNS-----TVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAI 497
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
++FE+ K +PD V ++VLTAC+HSG + G F M + Y + P EHY CM DL
Sbjct: 498 DLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDL 557
Query: 529 FGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYY 588
RAG L+ A+++I M +K +W TL+ AC+ G+ G AA ++LE+ P +
Sbjct: 558 LCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATAL 617
Query: 589 ILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIY 648
+ +AN+Y++ G E A VR M+ GV K PG + + + S F GD +P + +IY
Sbjct: 618 VTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIY 677
Query: 649 PLMD 652
+++
Sbjct: 678 NILE 681
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 184/396 (46%), Gaps = 39/396 (9%)
Query: 111 LHWNMLISMFVRNELFVEALSAYRKM--LRKQVIPDEFTYPSVLKACGELLDCASGVEVH 168
+ W +I +V EAL + M + V PD VLKACG+ + A G +H
Sbjct: 72 VSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLH 131
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
S+ S++V ++L+ MY + GK++ + +F MP R+ V+W II+
Sbjct: 132 AYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIIT--------- 182
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL-DHVAMVVGL 287
G +HAG +K L S+M S L D + L
Sbjct: 183 --------------------------GLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIAL 216
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
AC+ + +K GK IH H + GF V N+L TMY+ CG++ LF+ M E+ ++
Sbjct: 217 KACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVV 276
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
+W +++ + + + + F +M + PN T AS+ CA ++ L G++ HC +
Sbjct: 277 SWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNV 336
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
+ + L + N+++ MY+ G ++ A +F + RD ++++ +I GY G G+
Sbjct: 337 LSL-GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQ 503
F M + KP A+ ++L+ + ++ G+
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGR 431
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 160/369 (43%), Gaps = 41/369 (11%)
Query: 194 GKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMA 253
G L AR +FD MP D VSW + + +R
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTS----------------IIKR----------------- 80
Query: 254 GGYLHAGNFKGALKLLSQMRTSIHL---DHVAMVVGLNACSHIGALKLGKEIHGHAVRTG 310
Y+ A N AL L S MR H D + V L AC + G+ +H +AV+T
Sbjct: 81 --YVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTS 138
Query: 311 FDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFR 370
V ++L+ MY R G + + +F M + +TW A+++G H R E F
Sbjct: 139 LLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFS 198
Query: 371 QMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARS 430
+M + T A L CA + +++GK H +++ R F L + N+L MY
Sbjct: 199 EMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR-GFVTTLCVANSLATMYTEC 257
Query: 431 GKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVL 490
G++ + +F++++ RD V++T++I Y G+ A+ F +M ++ P+ ++
Sbjct: 258 GEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMF 317
Query: 491 TACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPT 550
+AC+ + G+ L ++ G+ + M ++ G L A + M +
Sbjct: 318 SACASLSRLVWGEQLHCNVL-SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDI 376
Query: 551 PAMWATLIG 559
+ W+T+IG
Sbjct: 377 IS-WSTIIG 384
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 182/618 (29%), Positives = 300/618 (48%), Gaps = 47/618 (7%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACI-VTESSSSLEPLHWNMLISMFV 121
G + H + G D+N + L+S YA+ D + V ES S + + +I
Sbjct: 157 GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLA 216
Query: 122 RNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCAS-----GVEVHKAIEVGSM 176
R +EA+ +R M K V D ++L C S G E+ K I ++
Sbjct: 217 RENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLAL 276
Query: 177 ----GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
G L ++N+L+ +YAK + A +F MPE + VSWN +I + ++ +
Sbjct: 277 RLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVE 336
Query: 233 LFERMQEEGVEMNIII-------------------------------WNTMAGGYLHAGN 261
RM++ G + N + WN M GY + +
Sbjct: 337 FLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEH 396
Query: 262 FKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNA 320
++ A+ QM+ ++ D + V L++C+ + L+ GK+IHG +RT ++ +
Sbjct: 397 YEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSG 456
Query: 321 LITMYSRCGDLGHAYMLFQR-MEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAE- 378
LI +YS C + + +F + E + WN+M+SGF H + LFR+M H+ A
Sbjct: 457 LIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRM-HQTAVL 515
Query: 379 -PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAK 437
PN + A+VL C+R+ +L HG++FH ++K + + L DMY + G++ A+
Sbjct: 516 CPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFV-ETALTDMYCKCGEIDSAR 574
Query: 438 RVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSG 497
+ FD++ R++ V + MI GYG G G A+ ++ +M KPD + V+VLTACSHSG
Sbjct: 575 QFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSG 634
Query: 498 LVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATL 557
LV G + M +GI P ++HY C+ D GRAG L A+++ PYK + +W L
Sbjct: 635 LVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEIL 694
Query: 558 IGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVK 617
+ +CR+HG+ L A KL+ + P S Y+L++N Y++ W + A ++ M V
Sbjct: 695 LSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVH 754
Query: 618 KAPGCAWVDVGGEFSPFF 635
K PG +W G + F
Sbjct: 755 KTPGQSWTTYGNDLDSGF 772
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 212/491 (43%), Gaps = 102/491 (20%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFY--------ARFNLFDD----------------- 97
GK +H ++ +G +T + RL+ Y AR +FD+
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYAR-KVFDEMSVRDVYSWNAFLTFRC 83
Query: 98 -------ACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPS 150
AC V + + + WN +IS+ VR +AL Y++M+ +P FT S
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 151 VLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKL-EVARHLFDNMPER 209
VL AC ++LD G+ H + ++FV NAL+SMYAK G + + +F+++ +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 210 DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLL 269
++VS+ +I A EA ++F M E+GV+++ + + +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNI----------------- 246
Query: 270 SQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCG 329
L A G ++ S I +LGK+IH A+R GF ++ N+L+ +Y++
Sbjct: 247 --------LSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNK 298
Query: 330 DLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP 389
D+ A ++F M E +++WN M+ GF R D+ +M G +PN VT SVL
Sbjct: 299 DMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358
Query: 390 LCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEV 449
C RSG V +R+F S+ +
Sbjct: 359 AC------------------------------------FRSGDVETGRRIFSSIPQPSVS 382
Query: 450 TYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
+ AM+ GY + A++ F +M +KPD + +L++C+ + G+ +
Sbjct: 383 AWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI---- 438
Query: 510 VDDYGIIPRIE 520
+G++ R E
Sbjct: 439 ---HGVVIRTE 446
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 193/413 (46%), Gaps = 24/413 (5%)
Query: 163 SGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYA 222
SG +H I M ++ N L+ +Y + G + AR +FD M RD SWN ++
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 223 SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL-DHV 281
G GEA ++F+ M E +++ WN M + G + AL + +M L
Sbjct: 84 KVGDLGEACEVFDGMPER----DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRF 139
Query: 282 AMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDL-GHAYMLFQR 340
+ L+ACS + G HG AV+TG D V NAL++MY++CG + + +F+
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 341 MEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA-------- 392
+ + +++ A++ G A ++V E +FR M +G + + V ++++L + A
Sbjct: 200 LSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSL 259
Query: 393 -RIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTY 451
I + GK+ HC + R F L L N+L+++YA++ + A+ +F + + V++
Sbjct: 260 SEIYGNELGKQIHCLAL-RLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSW 318
Query: 452 TAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVD 511
MI G+G + ++ M +P+ V ++VL AC SG V G+ +F +
Sbjct: 319 NIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ 378
Query: 512 DYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY---KPTPAMWATLIGAC 561
P + + M + +A +M + KP + ++ +C
Sbjct: 379 -----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 8/239 (3%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFD-DACIVTESSSSLEPLH 112
C + L GKQ+H VI +N+ ++ L++ Y+ + CI + + L+
Sbjct: 426 CARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIAC 485
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN +IS F N L +AL +R+M + V+ P+E ++ +VL +C L G + H +
Sbjct: 486 WNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV 545
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
FV AL MY K G+++ AR FD + ++ V WN +I Y G EA
Sbjct: 546 VKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAV 605
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIH-----LDHVAMVV 285
L+ +M G + + I + ++ H+G + L++LS M+ IH LDH +V
Sbjct: 606 GLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQ-RIHGIEPELDHYICIV 663
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 275/520 (52%), Gaps = 39/520 (7%)
Query: 148 YPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP 207
Y ++L AC + G VH + + ++ L+ Y K LE AR + D MP
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 208 ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALK 267
E+ N++ W M Y G+ AL
Sbjct: 115 EK-----------------------------------NVVSWTAMISRYSQTGHSSEALT 139
Query: 268 LLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYS 326
+ ++M R+ + L +C L LGK+IHG V+ +D V ++L+ MY+
Sbjct: 140 VFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYA 199
Query: 327 RCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIAS 386
+ G + A +F+ + E+ +++ A+++G+A + +E +F ++ EG PNYVT AS
Sbjct: 200 KAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYAS 259
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR 446
+L + +A L HGK+ HC++++RE Y +L N+L+DMY++ G + A+R+FD++ R
Sbjct: 260 LLTALSGLALLDHGKQAHCHVLRRE-LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 318
Query: 447 DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFK-IKPDHVAMVAVLTACSHSGLVAQGQVL 505
+++ AM+ GY G G+ L +F M K +KPD V ++AVL+ CSH + G +
Sbjct: 319 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 378
Query: 506 FQEMV-DDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIH 564
F MV +YG P EHY C+ D+ GRAG +++A E I RMP KPT + +L+GACR+H
Sbjct: 379 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 438
Query: 565 GNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAW 624
+ +GE +L+E++P+++G Y++++N+YA+AG W+++ VR M V K PG +W
Sbjct: 439 LSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSW 498
Query: 625 VDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
+ F D ++P E+ M ++ MK AGY+
Sbjct: 499 IQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 538
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 188/392 (47%), Gaps = 48/392 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C++ +L G+++HA +I + T + RL+ FY + + +DA V + +
Sbjct: 61 ACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVS 120
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W +IS + + EAL+ + +M+R P+EFT+ +VL +C G ++H I
Sbjct: 121 WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV 180
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ +FV ++L+ MYAK G+++ AR +F+ +PERD VS II+ YA G EA +
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
+F R+ EG+ N + + ++ L A S
Sbjct: 241 MFHRLHSEGMSPNYVTYASL----------------------------------LTALSG 266
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+ L GK+ H H +R ++N+LI MYS+CG+L +A LF M E+ I+WNAM
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAM 326
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGKE-------FH 404
L G++ EV LFR M E +P+ VT+ +VL C+ HG+ F
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS------HGRMEDTGLNIFD 380
Query: 405 CYIMKREQFKEYLLLWNTLVDMYARSGKVLEA 436
+ K + +VDM R+G++ EA
Sbjct: 381 GMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/599 (28%), Positives = 306/599 (51%), Gaps = 40/599 (6%)
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNEL 125
LH + GFD + ++ +++ Y + + DA + + + + WN +IS +
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 126 FVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNA 185
E L +M + PD+ T+ + L G + D G +H I + + A
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA 285
Query: 186 LVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
L++MY K GK E + + + +P +D
Sbjct: 286 LITMYLKCGKEEASYRVLETIPNKD----------------------------------- 310
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHG 304
++ W M G + G + AL + S+M ++ L A+ + +C+ +G+ LG +HG
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG 370
Query: 305 HAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDE 364
+ +R G+ + N+LITMY++CG L + ++F+RM E+ L++WNA++SG+A + +
Sbjct: 371 YVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCK 430
Query: 365 VSFLFRQMLHEGAEP-NYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTL 423
LF +M + + + T+ S+L C+ L GK HC ++ R + L+ L
Sbjct: 431 ALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI-RSFIRPCSLVDTAL 489
Query: 424 VDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDH 483
VDMY++ G + A+R FDS++ +D V++ +I GYG G+G +AL I+ E ++P+H
Sbjct: 490 VDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Query: 484 VAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIIT 543
V +AVL++CSH+G+V QG +F MV D+G+ P EH AC+ DL RA + A +
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYK 609
Query: 544 RMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSE 603
+P+ + ++ ACR +G T + + ++E+KP +G+Y+ + + +AA W +
Sbjct: 610 ENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDD 669
Query: 604 LAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAG 662
++E MR+LG+KK PG + +++ G+ + FF+ TS H+ + L+ L+ M G
Sbjct: 670 VSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTS--HSDDTVSLLKLLSREMMQFG 726
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 262/558 (46%), Gaps = 72/558 (12%)
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALV 187
+ LS + ML +++PD FT+PS+LKAC L + G+ +H+ + V ++ ++LV
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV 88
Query: 188 SMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV----- 242
++YAKFG L AR +F+ M ERD V W +I CY+ G GEA L M+ +G+
Sbjct: 89 NLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPV 148
Query: 243 ---------------------------EMNIIIWNTMAGGYL---HAGNFKG-------- 264
+ +I + N+M Y H G+ K
Sbjct: 149 TLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR 208
Query: 265 --------------------ALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
LKLL +MR + D L+ + L++G+ +H
Sbjct: 209 DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH 268
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
V+TGFDV +++ ALITMY +CG +Y + + + K ++ W M+SG + R +
Sbjct: 269 CQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAE 328
Query: 364 EVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTL 423
+ +F +ML G++ + IASV+ CA++ + G H Y+++ + L N+L
Sbjct: 329 KALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL-NSL 387
Query: 424 VDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKI--KP 481
+ MYA+ G + ++ +F+ + RD V++ A+I GY + AL +FEEM KFK +
Sbjct: 388 ITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM-KFKTVQQV 446
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
D +V++L ACS +G + G+++ ++ + I P + D++ + G L A+
Sbjct: 447 DSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRC 505
Query: 542 ITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLE--MKPDHSGYYILIANMYAAAG 599
+ +K + W LI HG + + L M+P+H + ++++
Sbjct: 506 FDSISWKDVVS-WGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGM 564
Query: 600 CWSELAEVRTYMRNLGVK 617
L + +R+ GV+
Sbjct: 565 VQQGLKIFSSMVRDFGVE 582
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/599 (30%), Positives = 301/599 (50%), Gaps = 41/599 (6%)
Query: 65 QLHAQVISLGFDQNTIMLPR-LVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRN 123
Q+HA VIS G N + R L++ R A V + +N +I ++ R
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 124 ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEV-HKAIEVGSMGWSLFV 182
+ E L Y +M+ +++ PD T+ +KAC L G V KA++ G +FV
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKN-DVFV 153
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
++++++Y K GK++ A LF M +RD
Sbjct: 154 CSSVLNLYMKCGKMDEAEVLFGKMAKRD-------------------------------- 181
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKE 301
+I W TM G+ AG A++ +M+ D V M+ L A +G K+G+
Sbjct: 182 ---VICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRS 238
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
+HG+ RTG + V +L+ MY++ G + A +F RM K ++W +++SGFA
Sbjct: 239 VHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGL 298
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
++ +M G +P+ VT+ VL C+++ +L+ G+ HCYI+KR +
Sbjct: 299 ANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR--VTAT 356
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
L+DMY++ G + ++ +F+ + R+D V + MI YG+ G GQ +++F +M + I+P
Sbjct: 357 ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP 416
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
DH ++L+A SHSGLV QGQ F M++ Y I P +HY C+ DL RAG + +A ++
Sbjct: 417 DHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDM 476
Query: 542 ITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCW 601
I +W L+ C H N +G+ AA K+L++ PD G L++N +A A W
Sbjct: 477 INSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKW 536
Query: 602 SELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKD 660
E+A+VR MRN ++K PG + ++V GE F + D S+ + ++ L ++D
Sbjct: 537 KEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRD 595
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 182/391 (46%), Gaps = 37/391 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C++ L G+ + + + G+ + + +++ Y + D+A ++ + + +
Sbjct: 125 ACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVIC 184
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W +++ F + ++A+ YR+M + D +L+A G+L D G VH +
Sbjct: 185 WTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLY 244
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ ++ V +LV MYAK G +EVA +F M + VSW ++IS +A G +AF+
Sbjct: 245 RTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFE 304
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
MQ G + D V +V L ACS
Sbjct: 305 AVVEMQSLGFQP----------------------------------DLVTLVGVLVACSQ 330
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVR-NALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
+G+LK G+ +H + ++ VLD V AL+ MYS+CG L + +F+ + K L+ WN
Sbjct: 331 VGSLKTGRLVHCYILKR--HVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNT 388
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
M+S + EV LF +M EP++ T AS+L + ++ G+ + ++ +
Sbjct: 389 MISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKY 448
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDS 442
+ + + L+D+ AR+G+V EA + +S
Sbjct: 449 KIQPSEKHYVCLIDLLARAGRVEEALDMINS 479
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 398 QHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRG 457
+H + H +++ + L+ R G++ A++VFD L +R Y +MI
Sbjct: 31 RHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVV 90
Query: 458 YGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
Y L ++++M KI+PD + AC ++ +G+ ++ + V D+G
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV-DFGYKN 149
Query: 518 RIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
+ + + +L+ + G +++A+ + +M K W T++
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMA-KRDVICWTTMV 189
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/685 (26%), Positives = 325/685 (47%), Gaps = 75/685 (10%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C ++ + G +H V+ G ++ + LVSFY DA + + +
Sbjct: 196 ACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVS 255
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQ----VIPDEFTYPSVLKACGELLDCASGVEVH 168
WN +I +F N E+ +M+ + +PD T +VL C + G VH
Sbjct: 256 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 315
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+ L ++NAL+ MY+K G + A+ +F ++ VSWNT++ +++ G
Sbjct: 316 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 375
Query: 229 EAFKLFERMQEEGVEM-------------------------------------NIIIWNT 251
F + +M G ++ N ++ N
Sbjct: 376 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 435
Query: 252 MAGGYLHAGNFKGALKLLSQMRTS-------------------IHLD-HVAMVVG----- 286
Y G+ A ++ +R+ + LD H+ M +
Sbjct: 436 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Query: 287 -------LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQ 339
L+ACS + +L+LGKE+HG +R + V +++++Y CG+L LF
Sbjct: 496 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 340 RMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQH 399
ME+K L++WN +++G+ D +FRQM+ G + +++ V C+ + +L+
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 400 GKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYG 459
G+E H Y +K ++ + +L+DMYA++G + ++ +VF+ L + ++ AMI GYG
Sbjct: 616 GREAHAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI 519
+ G + A+ +FEEM + PD + + VLTAC+HSGL+ +G +M +G+ P +
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 520 EHYACMADLFGRAGLLNKAKEIIT-RMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLL 578
+HYAC+ D+ GRAG L+KA ++ M + +W +L+ +CRIH N +GE A KL
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 579 EMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGD 638
E++P+ Y+L++N+YA G W ++ +VR M + ++K GC+W+++ + F VG+
Sbjct: 795 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 854
Query: 639 TSNPHAGEIYPLMDGLNELMKDAGY 663
EI L L + GY
Sbjct: 855 RFLDGFEEIKSLWSILEMKISKMGY 879
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/490 (29%), Positives = 231/490 (47%), Gaps = 36/490 (7%)
Query: 9 LKNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLHA 68
+ NF G L +F++ +SS F + G+++H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFL-LVREALGLLLQASGKRKDIEMGRKIHQ 108
Query: 69 QVI-SLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFV 127
V S + ++ R+++ YA DD+ V ++ S WN +IS + RNEL+
Sbjct: 109 LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYD 168
Query: 128 EALSAYRKMLRK-QVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNAL 186
E L + +M+ ++PD FTYP V+KAC + D G+ VH + + +FV NAL
Sbjct: 169 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNAL 228
Query: 187 VSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
VS Y G + A LFD MPER+ VSWN++I ++ G E+F L M EE
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEE------ 282
Query: 247 IIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHA 306
N GA D +V L C+ + LGK +HG A
Sbjct: 283 --------------NGDGAFMP----------DVATLVTVLPVCAREREIGLGKGVHGWA 318
Query: 307 VRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVS 366
V+ D + NAL+ MYS+CG + +A M+F+ K +++WN M+ GF+
Sbjct: 319 VKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTF 378
Query: 367 FLFRQMLH--EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLV 424
+ RQML E + + VTI + +P+C + L KE HCY +K+E F L+ N V
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE-FVYNELVANAFV 437
Query: 425 DMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHV 484
YA+ G + A+RVF + + ++ A+I G+ + +++L+ +M + PD
Sbjct: 438 ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSF 497
Query: 485 AMVAVLTACS 494
+ ++L+ACS
Sbjct: 498 TVCSLLSACS 507
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 180/614 (29%), Positives = 295/614 (48%), Gaps = 63/614 (10%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRN 123
+Q+ + G D+ + L++ Y + A ++ + + + WN LI + RN
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 124 ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH 183
+A + ML++ P T ++L CG+ + G VH + V
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
NAL+S Y+K +L A LF M ++ VSWNT+I Y+ G EA +F+ M E+ VE
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 244 M-----------------------------NIIIWNTMAGGYLHAGNFKGALKLLSQMR- 273
+ +I + ++ Y G A +L + +
Sbjct: 250 ISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQ 309
Query: 274 ------TSI-------------------------HLDHVAMVVGLNACSHIGALKLGKEI 302
TSI +D VA+V L+ C + +G +
Sbjct: 310 DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 369
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
HG+A+++G V N LITMYS+ D+ LF++++E LI+WN+++SG R
Sbjct: 370 HGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRA 429
Query: 363 DEVSFLFRQ-MLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
+F Q ML G P+ +TIAS+L C+++ L GKE H Y + R F+ +
Sbjct: 430 STAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL-RNNFENENFVCT 488
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
L+DMYA+ G ++A+ VF S+ T+ +MI GY + G AL+ + EM + +KP
Sbjct: 489 ALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKP 548
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
D + + VL+AC+H G V +G++ F+ M+ ++GI P ++HYA M L GRA L +A +
Sbjct: 549 DEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYL 608
Query: 542 ITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCW 601
I +M KP A+W L+ AC IH +GE+ A K+ + + G Y+L++N+YA W
Sbjct: 609 IWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMW 668
Query: 602 SELAEVRTYMRNLG 615
++ VR M++ G
Sbjct: 669 DDVVRVRNMMKDNG 682
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 192/398 (48%), Gaps = 47/398 (11%)
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDC----ASGVEV 167
+++ L+ + E+ ++ +R +LR + P+ FT L+A + V+
Sbjct: 15 YFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQT 74
Query: 168 HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW 227
H + + ++V +L+++Y K G + A+ LFD MPERD V WN +I Y+ G
Sbjct: 75 H--LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYE 132
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGL 287
+A+KLF M ++G F + L + L
Sbjct: 133 CDAWKLFIVMLQQG--------------------FSPSATTLVNL--------------L 158
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
C G + G+ +HG A ++G ++ V+NALI+ YS+C +LG A +LF+ M++K +
Sbjct: 159 PFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTV 218
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
+WN M+ ++ +E +F+ M + E + VTI ++L A++ H + HC +
Sbjct: 219 SWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS-----AHVSH-EPLHCLV 272
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
+K + ++ +LV Y+R G ++ A+R++ S + V T+++ Y KG+ +A
Sbjct: 273 VKCGMVNDISVV-TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIA 331
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVL 505
+ F + + +K D VA+V +L C S + G L
Sbjct: 332 VVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 369
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 13/256 (5%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC + + G LH I G T+++ L++ Y++F+ + + E +
Sbjct: 356 GCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLIS 415
Query: 113 WNMLISMFVRNELFVEALSAYRKM-LRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN +IS V++ A + +M L ++PD T S+L C +L G E+H
Sbjct: 416 WNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYT 475
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ FV AL+ MYAK G A +F ++ +WN++IS Y+ G A
Sbjct: 476 LRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRAL 535
Query: 232 KLFERMQEEGVEMNIIIWNTMA-----GGYLHAGN--FKGALKLLSQMRTSIHLDHVAMV 284
+ M+E+G++ + I + + GG++ G F+ +K + S L H A++
Sbjct: 536 SCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK---EFGISPTLQHYALM 592
Query: 285 VGL--NACSHIGALKL 298
VGL AC AL L
Sbjct: 593 VGLLGRACLFTEALYL 608
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 19/226 (8%)
Query: 344 KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
+ L ++++L H + +FR +L PN+ T++ L F
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQ--------ATTTSF 62
Query: 404 HCYIMKREQFKEYLL---------LWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAM 454
+ + ++ EQ + +L + +L+++Y + G V A+ +FD + RD V + A+
Sbjct: 63 NSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNAL 122
Query: 455 IRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYG 514
I GY G A +F M + P +V +L C G V+QG+ + + G
Sbjct: 123 ICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV-HGVAAKSG 181
Query: 515 IIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGA 560
+ + + + + L A+ + M K T + W T+IGA
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGA 226
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 281/537 (52%), Gaps = 62/537 (11%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N LVS Y K G+++ AR +FD MPER+ VSW ++ Y G A LF +M E+
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK--- 139
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIG-ALKLGKEI 302
N + W M G+L G A KL + ++ +M+ GL + A ++ E+
Sbjct: 140 -NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 303 HGHAV-------------------RTGFDVLDNVR----NALITMYSRCGDLGHAYMLFQ 339
+V R FDV+ +++ Y + G + A LF+
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFE 258
Query: 340 RMEEKGLITWNAMLSG-------------FAHMDRVDEVSF------------------L 368
M K +I NAM+SG F M ++ S+ L
Sbjct: 259 VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDL 318
Query: 369 FRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYA 428
F M +G P + T+ S+L +CA +A+L HGK+ H ++ R QF + + + L+ MY
Sbjct: 319 FILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV-RCQFDVDVYVASVLMTMYI 377
Query: 429 RSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM-CKFKIKPDHVAMV 487
+ G+++++K +FD +D + + ++I GY G G+ AL +F EM KP+ V V
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437
Query: 488 AVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY 547
A L+ACS++G+V +G +++ M +G+ P HYACM D+ GRAG N+A E+I M
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497
Query: 548 KPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEV 607
+P A+W +L+GACR H + E+ A KL+E++P++SG YIL++NMYA+ G W+++AE+
Sbjct: 498 EPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAEL 557
Query: 608 RTYMRNLGVKKAPGCAWVDVGGEFSPFFVGD-TSNPHAGEIYPLMDGLNELMKDAGY 663
R M+ V+K+PGC+W +V + F G S+P I ++D L+ L+++AGY
Sbjct: 558 RKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGY 614
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 189/404 (46%), Gaps = 39/404 (9%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N++V+ Y AR LFD MP+R+ +SWN ++S Y G EA K+F+ M E
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER--- 108
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI-GALKLGKEI 302
N++ W + GY+H G A L +M + M++G I A KL + I
Sbjct: 109 -NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI 167
Query: 303 HGHAVRTGFDVLDNV-RNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
DN+ R ++I + G + A +F M E+ +ITW M++G+ +R
Sbjct: 168 PDK---------DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYL---- 417
VD+ +F M E V+ S+L + +Q+G+ I E+ E +
Sbjct: 219 VDDARKIFDVM----PEKTEVSWTSML-----MGYVQNGR-----IEDAEELFEVMPVKP 264
Query: 418 -LLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK 476
+ N ++ + G++ +A+RVFDS+ R++ ++ +I+ + G AL++F M K
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 477 FKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLN 536
++P ++++L+ C+ + G+ + ++V + + + + ++ + G L
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD-VYVASVLMTMYIKCGELV 383
Query: 537 KAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEM 580
K+K I R P K MW ++I HG LGE A EM
Sbjct: 384 KSKLIFDRFPSKDI-IMWNSIISGYASHG---LGEEALKVFCEM 423
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 180/429 (41%), Gaps = 68/429 (15%)
Query: 76 DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRK 135
D+N I LVS Y + D+A V + + W L+ +V N A S + K
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 136 MLRK-------------------------QVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
M K ++IPD+ G C G V +A
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGL---CKEG-RVDEA 191
Query: 171 IEV-GSMG-WSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
E+ M S+ +V+ Y + +++ AR +FD MPE+ +VSW +++ Y G
Sbjct: 192 REIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIE 251
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM---------------- 272
+A +LFE M + V I N M G G A ++ M
Sbjct: 252 DAEELFEVMPVKPV----IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHE 307
Query: 273 RTSIHLDHV----------------AMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDN 316
R L+ + ++ L+ C+ + +L GK++H VR FDV
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVY 367
Query: 317 VRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG 376
V + L+TMY +CG+L + ++F R K +I WN+++SG+A +E +F +M G
Sbjct: 368 VASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSG 427
Query: 377 A-EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLE 435
+ +PN VT + L C+ ++ G + + + K + +VDM R+G+ E
Sbjct: 428 STKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNE 487
Query: 436 AKRVFDSLT 444
A + DS+T
Sbjct: 488 AMEMIDSMT 496
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C ++ SL GKQ+HAQ++ FD + + L++ Y + + ++ + S + + W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 114 NMLISMFVRNELFVEALSAYRKM-LRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
N +IS + + L EAL + +M L P+E T+ + L AC G+++++++E
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 173 VGSMGWSLFVHNA-LVSMYAKFGKLEVARHLFDNMP-ERDDVSWNTII 218
+ H A +V M + G+ A + D+M E D W +++
Sbjct: 461 SVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/612 (30%), Positives = 302/612 (49%), Gaps = 40/612 (6%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
G +V G+Q+H VI G++ N + LV YA+ +DA + S +
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 113 WNMLISMFVRNELFVEALSAYRKM-LRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN LI+ FV+ A M ++ V D T+ +L + + C
Sbjct: 170 WNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFC---------- 219
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
N L ++AK KL + + N +IS YA G+ +A
Sbjct: 220 ------------NLLKQVHAKVLKLGLQHEI---------TICNAMISSYADCGSVSDAK 258
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNAC 290
++F+ + G ++I WN+M G+ + A +L QM R + D L+AC
Sbjct: 259 RVFDGL---GGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSR--CGDLGHAYMLFQRMEEKGLIT 348
S GK +HG ++ G + + + NALI+MY + G + A LF+ ++ K LI+
Sbjct: 316 SGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS 375
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
WN++++GFA ++ F + + + +++L C+ +A LQ G++ H +
Sbjct: 376 WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA-LA 434
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR-DEVTYTAMIRGYGMKGEGQMA 467
+ F + ++L+ MY++ G + A++ F ++ + V + AMI GY G GQ++
Sbjct: 435 TKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVS 494
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMAD 527
L++F +MC +K DHV A+LTACSH+GL+ +G L M Y I PR+EHYA D
Sbjct: 495 LDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVD 554
Query: 528 LFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGY 587
L GRAGL+NKAKE+I MP P P + T +G CR G + A LLE++P+
Sbjct: 555 LLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFT 614
Query: 588 YILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEI 647
Y+ +++MY+ W E A V+ M+ GVKK PG +W+++ + F D SNP +I
Sbjct: 615 YVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDI 674
Query: 648 YPLMDGLNELMK 659
Y ++ L + M+
Sbjct: 675 YMMIKDLTQEMQ 686
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 292/593 (49%), Gaps = 46/593 (7%)
Query: 108 LEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEV 167
L+ + WN +++ + R L EA++ + ++ PD++++ ++L C L + G ++
Sbjct: 33 LDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKI 92
Query: 168 HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNM--PERDDVSWNTIISCYASRG 225
+ SL V+N+L+ MY K A +F +M R++V+W +++ Y +
Sbjct: 93 QSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAE 152
Query: 226 TWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMV 284
+ A +F M + WN M G+ H G + L L +M + D
Sbjct: 153 QFEAALDVFVEMPKRVA----FAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFS 208
Query: 285 VGLNACSHIGA-LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME- 342
+NACS + + G+ +H ++ G+ +N++++ Y++ G A + +E
Sbjct: 209 SLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEV 268
Query: 343 ------------------------------EKGLITWNAMLSGFAHMDRVDEVSFLFRQM 372
EK ++TW M++G+ ++ F +M
Sbjct: 269 LTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM 328
Query: 373 LHEGAEPNYVTIASVLPLCARIANLQHGKEFH-CYIMKREQFKEYLLLWNTLVDMYARSG 431
+ G + ++ +VL C+ +A L HGK H C I F+ Y + N LV++YA+ G
Sbjct: 329 MKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI--HCGFQGYAYVGNALVNLYAKCG 386
Query: 432 KVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLT 491
+ EA R F + +D V++ M+ +G+ G AL +++ M IKPD+V + +LT
Sbjct: 387 DIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLT 446
Query: 492 ACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTP 551
CSHSGLV +G ++F+ MV DY I ++H CM D+FGR G L +AK++ T T
Sbjct: 447 TCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTD 506
Query: 552 ----AMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEV 607
+ W TL+GAC H +T LG + L +P ++L++N+Y + G W E +V
Sbjct: 507 SSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDV 566
Query: 608 RTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKD 660
R M G+KK PGC+W++VG + S F VGD+S+P E+ ++ L M++
Sbjct: 567 RREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMRN 619
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 189/447 (42%), Gaps = 108/447 (24%)
Query: 187 VSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
++ AK G++ AR +FD MPE D V+WNT+++ Y+ G EA LF +++
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLR-------- 62
Query: 247 IIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHA 306
F A D + L+ C+ +G +K G++I
Sbjct: 63 ---------------FSDAKP-----------DDYSFTAILSTCASLGNVKFGRKIQSLV 96
Query: 307 VRTGFDVLDNVRNALITMYSRCGD-----------------------LGHAYM------- 336
+R+GF V N+LI MY +C D L AYM
Sbjct: 97 IRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEA 156
Query: 337 ---LFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLC-A 392
+F M ++ WN M+SG AH +++ LF++ML +P+ T +S++ C A
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSA 216
Query: 393 RIANLQHGKEFHCYIMK----------------------REQFKEYL--------LLWNT 422
+N+ +G+ H ++K R+ L + WN+
Sbjct: 217 DSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNS 276
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
++D + G+ +A VF ++ VT+T MI GYG G+G+ AL F EM K + D
Sbjct: 277 IIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
Query: 483 HVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA----CMADLFGRAGLLNKA 538
H A AVL ACS L+ G+ M+ I + YA + +L+ + G + +A
Sbjct: 337 HFAYGAVLHACSGLALLGHGK-----MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 539 KEIITRMPYKPTPAMWATLIGACRIHG 565
+ K + W T++ A +HG
Sbjct: 392 DRAFGDIANKDLVS-WNTMLFAFGVHG 417
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 37/261 (14%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDA---------------------CI- 100
G+ +HA ++ G+ ++SFY + DDA C+
Sbjct: 224 GRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK 283
Query: 101 VTESSSSLEPLH---------WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSV 151
+ E+ +LE H W +I+ + RN +AL + +M++ V D F Y +V
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAV 343
Query: 152 LKACGELLDCASGVEVHKA-IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERD 210
L AC L G +H I G G++ +V NALV++YAK G ++ A F ++ +D
Sbjct: 344 LHACSGLALLGHGKMIHGCLIHCGFQGYA-YVGNALVNLYAKCGDIKEADRAFGDIANKD 402
Query: 211 DVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLS 270
VSWNT++ + G +A KL++ M G++ + + + + H+G + +
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 271 QM----RTSIHLDHVAMVVGL 287
M R + +DHV ++ +
Sbjct: 463 SMVKDYRIPLEVDHVTCMIDM 483
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 309/579 (53%), Gaps = 59/579 (10%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESS--SSLEPLHWNML 116
SL GKQ+H+ VI GF + ++ L++ Y + DAC+V E + + + + +N++
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 117 I---SMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCAS-GVEVHK-AI 171
I + F R+ E+L +RKML + P + T+ SV+ +C CA+ G +VH AI
Sbjct: 264 IDGLAGFKRD----ESLLVFRKMLEASLRPTDLTFVSVMGSCS----CAAMGHQVHGLAI 315
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ G ++L V NA ++MY+ F A +F+++ E+D V+WNT+IS Y A
Sbjct: 316 KTGYEKYTL-VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAM 374
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
+++RM GV+ + + ++ + TS+ LD + MV AC
Sbjct: 375 SVYKRMHIIGVKPDEFTFGSL-------------------LATSLDLDVLEMV---QAC- 411
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
++ G + NALI+ YS+ G + A +LF+R K LI+WNA
Sbjct: 412 --------------IIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNA 457
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAE--PNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
++SGF H E F +L P+ T++++L +C ++L G + H Y+++
Sbjct: 458 IISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR 517
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
QFKE L+ N L++MY++ G + + VF+ ++ +D V++ ++I Y GEG+ A+N
Sbjct: 518 HGQFKE-TLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVN 576
Query: 470 IFEEMC-KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
++ M + K+ PD AVL+ACSH+GLV +G +F MV+ +G+I ++H++C+ DL
Sbjct: 577 TYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDL 636
Query: 529 FGRAGLLNKAKEI--ITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSG 586
GRAG L++A+ + I+ +W L AC HG+ LG+ A L+E + D
Sbjct: 637 LGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPS 696
Query: 587 YYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWV 625
Y+ ++N+YA AG W E E R + +G K GC+W+
Sbjct: 697 VYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 212/480 (44%), Gaps = 62/480 (12%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCAS---GVEVHK 169
WN +I+ + ++ +R+M + V D+F + ++L C D S G +VH
Sbjct: 158 WNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC----DYGSLDFGKQVHS 213
Query: 170 AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFD--NMPERDDVSWNTIISCYASRGTW 227
+ + V NAL++MY + A +F+ ++ RD V++N +I A
Sbjct: 214 LVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAG---- 269
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGL 287
F+R + +++++ M + S+ + V +
Sbjct: 270 ------FKR------DESLLVFRKM-------------------LEASLRPTDLTFVSVM 298
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
+CS +G ++HG A++TG++ V NA +TMYS D G A+ +F+ +EEK L+
Sbjct: 299 GSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLV 355
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
TWN M+S + ++++M G +P+ T S+L + L+ + C I
Sbjct: 356 TWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQA--CII 413
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGY---GMKGEG 464
+ + + N L+ Y+++G++ +A +F+ R++ +++ A+I G+ G EG
Sbjct: 414 --KFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 465 QMALNIFEEMCKFKIKPDHVAMVAVLTAC-SHSGLVAQGQVLFQEMVDDYGIIPRIEHYA 523
+ E + +I PD + +L+ C S S L+ Q V +G
Sbjct: 472 LERFSCLLE-SEVRILPDAYTLSTLLSICVSTSSLMLGSQT--HAYVLRHGQFKETLIGN 528
Query: 524 CMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPD 583
+ +++ + G + + E+ +M K + W +LI A HG GE A M+ +
Sbjct: 529 ALINMYSQCGTIQNSLEVFNQMSEKDVVS-WNSLISAYSRHGE---GENAVNTYKTMQDE 584
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 41/282 (14%)
Query: 250 NTMAGGYLHAGNFKGALKLLSQMR--TSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAV 307
N G +G + ALKL + + T++ D ++ + + H+ G ++H +A+
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 308 RTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSG------------ 355
R+G +V N L+++Y R G+L F ++E + +W +LS
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 356 -FAHMDRVDEVSF-------------------LFRQMLHEGAEPNYVTIASVLPLCARIA 395
F M D+V+ LFR+M G + A++L +C
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYG 203
Query: 396 NLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFD--SLTRRDEVTYTA 453
+L GK+ H ++K F ++ N L+ MY V++A VF+ + RD+VT+
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVV-NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNV 262
Query: 454 MIRGY-GMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
+I G G K + +L +F +M + ++P + V+V+ +CS
Sbjct: 263 VIDGLAGFKRDE--SLLVFRKMLEASLRPTDLTFVSVMGSCS 302
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C++ +SL G Q HA V+ G + T++ L++ Y++ ++ V S + + W
Sbjct: 499 CVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSW 558
Query: 114 NMLISMFVRNELFVEALSAYRKMLRK-QVIPDEFTYPSVLKACGELLDCASGVEVHKA-I 171
N LIS + R+ A++ Y+ M + +VIPD T+ +VL AC G+E+ + +
Sbjct: 559 NSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMV 618
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLF----DNMPERDDVSWNTIISCYA 222
E + ++ + LV + + G L+ A L + R DV W +C A
Sbjct: 619 EFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAA 673
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 183/615 (29%), Positives = 302/615 (49%), Gaps = 51/615 (8%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC + L + +H Q+ FD + + L++ Y++ + + E + +
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH---- 168
W +IS + R E +AL ++ +M++ + P+ T SVL +CG + G VH
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 169 -KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW 227
+ ++ SL ALV +YA+ GKL + + +R
Sbjct: 331 RRELDPNYESLSL----ALVELYAECGKLSDCETVLRVVSDR------------------ 368
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVG 286
NI+ WN++ Y H G AL L QM T I D +
Sbjct: 369 -----------------NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASS 411
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDN-VRNALITMYSRCGDLGHAYMLFQRMEEKG 345
++AC + G + LGK+IHGH +RT DV D V+N+LI MYS+ G + A +F +++ +
Sbjct: 412 ISACENAGLVPLGKQIHGHVIRT--DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRS 469
Query: 346 LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHC 405
++TWN+ML GF+ E LF M H E N VT +V+ C+ I +L+ GK H
Sbjct: 470 VVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH- 528
Query: 406 YIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQ 465
+ + K+ L L+DMYA+ G + A+ VF +++ R V++++MI YGM G
Sbjct: 529 HKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIG 587
Query: 466 MALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACM 525
A++ F +M + KP+ V + VL+AC HSG V +G+ F ++ +G+ P EH+AC
Sbjct: 588 SAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN-LMKSFGVSPNSEHFACF 646
Query: 526 ADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHS 585
DL R+G L +A I MP+ ++W +L+ CRIH + + L ++ D +
Sbjct: 647 IDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDT 706
Query: 586 GYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAG 645
GYY L++N+YA G W E +R+ M++ +KK PG + +++ + F G+ +
Sbjct: 707 GYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTD 766
Query: 646 EIYPLMDGLNELMKD 660
EIY + L L +
Sbjct: 767 EIYRFLGNLQNLTNE 781
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/521 (25%), Positives = 253/521 (48%), Gaps = 51/521 (9%)
Query: 56 NVNSLSPGKQLHAQVISLG-FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWN 114
+ +SL QLHA ++ G ++ + + +L+ YA D + +V E+ + +
Sbjct: 10 SCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYG 69
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC-GELLDCASGVEVHKAIEV 173
+LI V L A+ Y +++ + +F +PSVL+AC G + G +VH I
Sbjct: 70 VLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIK 129
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
G + + +L+ MY + G L A +FD MP RD
Sbjct: 130 GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRD----------------------- 166
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSH 292
++ W+T+ L G AL++ M + D V M+ + C+
Sbjct: 167 ------------LVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAE 214
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+G L++ + +HG R FD+ + + N+L+TMYS+CGDL + +F+++ +K ++W AM
Sbjct: 215 LGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAM 274
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
+S + + ++ F +M+ G EPN VT+ SVL C I ++ GK H + ++RE
Sbjct: 275 ISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL 334
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
Y L LV++YA GK+ + + V ++ R+ V + ++I Y +G AL +F
Sbjct: 335 DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFR 394
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVA-----QGQVLFQEMVDDYGIIPRIEHYACMAD 527
+M +IKPD + + ++AC ++GLV G V+ ++ D++ +++ + D
Sbjct: 395 QMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-----VQN--SLID 447
Query: 528 LFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTV 568
++ ++G ++ A + ++ ++ W +++ +GN+V
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSV-VTWNSMLCGFSQNGNSV 487
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 196/713 (27%), Positives = 323/713 (45%), Gaps = 113/713 (15%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
CI+ S+ G+ LHA+ L + + + +L+S YA+ DA V +S W
Sbjct: 91 CIDSGSIHLGRILHAR-FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTW 149
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
+ +I + R + E +R M++ V+PD+F +P +L+ C D +G +H +
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK 209
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
M L V N+++++YAK G+L+ A F M ERD ++WN+++ Y G EA +L
Sbjct: 210 LGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVEL 269
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLD---HVAMVVGL-- 287
+ M++EG+ ++ WN + GGY G A+ L+ +M T I D AM+ GL
Sbjct: 270 VKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIH 329
Query: 288 ------------------------------NACSHIGALKLGKEIHGHAVRTGF--DVLD 315
+ACS + + G E+H AV+ GF DVL
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVL- 388
Query: 316 NVRNALITMYSRCGDL-------------------------------GHAYMLFQRMEEK 344
V N+L+ MYS+CG L G AY LF RM++
Sbjct: 389 -VGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 345 GL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGA----------------------- 377
L ITWN M+SG+ E LF++M +G
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 378 -------------EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLV 424
PN VTI S+LP CA + + +E H +++R + N L
Sbjct: 508 ALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR-NLDAIHAVKNALT 566
Query: 425 DMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHV 484
D YA+SG + ++ +F + +D +T+ ++I GY + G AL +F +M I P+
Sbjct: 567 DTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRG 626
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
+ +++ A G V +G+ +F + +DY IIP +EH + M L+GRA L +A + I
Sbjct: 627 TLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQE 686
Query: 545 MPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSEL 604
M + +W + + CRIHG+ + AA L ++P+++ +++ +YA
Sbjct: 687 MNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRS 746
Query: 605 AEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNEL 657
E R+ +KK G +W++V F GD S +YPL++ ++ L
Sbjct: 747 LEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRL 799
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 183/439 (41%), Gaps = 54/439 (12%)
Query: 132 AYRKMLRKQVIPDE-FTYPSVLKACGELLDCASGVE--VHKAIEVGSMGWSLFVHNALVS 188
++ K +IPDE F Y L G LL+ ++ + +V + + + + S
Sbjct: 38 SFTKKKEPNIIPDEQFDY---LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDS 94
Query: 189 MYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIII 248
G++ AR F E D ++S YA G +A K+F+ M+E N+
Sbjct: 95 GSIHLGRILHAR--FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFT 148
Query: 249 WNTMAGGYLHAGNFKGALKLLS-QMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAV 307
W+ M G Y ++ KL M+ + D L C++ G ++ GK IH +
Sbjct: 149 WSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVI 208
Query: 308 RTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSF 367
+ G V N+++ +Y++CG+L A F+RM E+ +I WN++L + + +E
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVE 268
Query: 368 LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMY 427
L ++M EG P VT WN L+ Y
Sbjct: 269 LVKEMEKEGISPGLVT------------------------------------WNILIGGY 292
Query: 428 ARSGKVLEAKRVFDSL----TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDH 483
+ GK A + + D T+TAMI G G AL++F +M + P+
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 484 VAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIIT 543
V +++ ++ACS ++ QG + V G I + + D++ + G L A+++
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAV-KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 544 RMPYKPTPAMWATLIGACR 562
+ K + + G C+
Sbjct: 412 SVKNKDVYTWNSMITGYCQ 430
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 180/607 (29%), Positives = 285/607 (46%), Gaps = 45/607 (7%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISM 119
L G+ LH V+ G Q ++ L+ Y++ D A + + + + WN LIS
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 120 FVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLD---CASGVEVHKAIEVGSM 176
+VR E L+ KM R + + SVLKAC L+ G+ +H M
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
+ + V AL+ MYAK G L+ EA KLF
Sbjct: 284 EFDIVVRTALLDMYAKNGSLK-------------------------------EAIKLFSL 312
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKG-----ALKLLSQM-RTSIHLDHVAMVVGLNAC 290
M + N++ +N M G+L A KL M R + V L AC
Sbjct: 313 MPSK----NVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKAC 368
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
S L+ G++IH + F + + +ALI +Y+ G F ++ + +W
Sbjct: 369 SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWT 428
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
+M+ ++++ LFRQ+ P T++ ++ CA A L G++ Y +K
Sbjct: 429 SMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIK- 487
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
+ + + + MYA+SG + A +VF + D TY+AMI G ALNI
Sbjct: 488 SGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNI 547
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
FE M IKP+ A + VL AC H GLV QG FQ M +DY I P +H+ C+ DL G
Sbjct: 548 FESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLG 607
Query: 531 RAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYIL 590
R G L+ A+ +I ++ P W L+ +CR++ ++V+G+ A +L+E++P+ SG Y+L
Sbjct: 608 RTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVL 667
Query: 591 IANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPL 650
+ N+Y +G S EVR MR+ GVKK P +W+ +G + F V D S+P + IY +
Sbjct: 668 LHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTM 727
Query: 651 MDGLNEL 657
++ ++ +
Sbjct: 728 LETMDNV 734
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 236/496 (47%), Gaps = 54/496 (10%)
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
+ +N LIS + + + +A+ + + + D+FTY L CGE D G +H
Sbjct: 114 ISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGL 173
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ V + +F+ N L+ MY+K GKL+ A LFD ERD VSWN++IS Y G E
Sbjct: 174 VVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEP 233
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
L +M +G+ + T A G LK A + LN
Sbjct: 234 LNLLAKMHRDGLNL-----TTYALG--------SVLK--------------ACCINLNE- 265
Query: 291 SHIGALKLGKEIHGHAVRTG--FDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
G ++ G IH + + G FD++ VR AL+ MY++ G L A LF M K ++T
Sbjct: 266 ---GFIEKGMAIHCYTAKLGMEFDIV--VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVT 320
Query: 349 WNAMLSGFAHMDRV-DEVSF----LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
+NAM+SGF MD + DE S LF M G EP+ T + VL C+ L++G++
Sbjct: 321 YNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGE 463
H I K F+ + + L+++YA G + + F S +++D ++T+MI + +
Sbjct: 381 HALICKN-NFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQ 439
Query: 464 GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA 523
+ A ++F ++ I+P+ + +++AC+ ++ G E + Y I I+ +
Sbjct: 440 LESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSG-----EQIQGYAIKSGIDAFT 494
Query: 524 CMA----DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHG--NTVLGEWAAGKL 577
+ ++ ++G + A ++ + P A ++ +I + HG N L + + K
Sbjct: 495 SVKTSSISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLAQHGSANEALNIFESMKT 553
Query: 578 LEMKPDHSGYY-ILIA 592
+KP+ + +LIA
Sbjct: 554 HGIKPNQQAFLGVLIA 569
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 158/332 (47%), Gaps = 17/332 (5%)
Query: 278 LDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYML 337
LD + + G++ LGK HGH +++ + + N L+ MY +C +LG A L
Sbjct: 45 LDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQL 104
Query: 338 FQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANL 397
F RM E+ +I++N+++SG+ M ++ LF + + + T A L C +L
Sbjct: 105 FDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDL 164
Query: 398 QHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRG 457
G+ H ++ + + L N L+DMY++ GK+ +A +FD RD+V++ ++I G
Sbjct: 165 DLGELLHGLVVVN-GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 458 YGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS---HSGLVAQGQVL---FQEMVD 511
Y G + LN+ +M + + A+ +VL AC + G + +G + ++
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 512 DYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGE 571
++ I+ R + D++ + G L +A ++ + MP K A + G ++ T
Sbjct: 284 EFDIVVR----TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 572 WAAGKLL------EMKPDHSGYYILIANMYAA 597
A KL ++P S + +++ AA
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAA 371
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 9/262 (3%)
Query: 19 SNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLHAQVISLGFDQN 78
S AFK F+ +Q SP C +L G+Q+HA + F +
Sbjct: 340 SEAFKLFMDMQRRGLEPSPS-------TFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 79 TIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLR 138
+ L+ YA +D S+S + W +I V+NE A +R++
Sbjct: 393 EFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFS 452
Query: 139 KQVIPDEFTYPSVLKACGELLDCASGVEVHK-AIEVGSMGWSLFVHNALVSMYAKFGKLE 197
+ P+E+T ++ AC + +SG ++ AI+ G ++ V + +SMYAK G +
Sbjct: 453 SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFT-SVKTSSISMYAKSGNMP 511
Query: 198 VARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYL 257
+A +F + D +++ +IS A G+ EA +FE M+ G++ N + +
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Query: 258 HAGNFKGALKLLSQMRTSIHLD 279
H G LK M+ ++
Sbjct: 572 HGGLVTQGLKYFQCMKNDYRIN 593
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 184/614 (29%), Positives = 298/614 (48%), Gaps = 76/614 (12%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTES-SSSLEPLH 112
C ++ L G+Q+H I GFD + ++ L++ YA+ +A + E+ +
Sbjct: 135 CTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVT 194
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W +++ + +N +A+ +R + R+ +++T+PSVL AC + C GV+VH I
Sbjct: 195 WTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIV 254
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+++V +AL+ MYAK ++E AR L + M E DDV
Sbjct: 255 KSGFKTNIYVQSALIDMYAKCREMESARALLEGM-EVDDV-------------------- 293
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACS 291
+ WN+M G + G AL + +M + +D + LN C
Sbjct: 294 --------------VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CF 338
Query: 292 HIG--ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
+ +K+ H V+TG+ V NAL+ MY++ G + A +F+ M EK +I+W
Sbjct: 339 ALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISW 398
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
A+++G H DE LF M G P+ + ASVL A + L+ G++ H +K
Sbjct: 399 TALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIK 458
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
F L + N+LV MY + G + +A +F+S+ RD +T+T +I GY
Sbjct: 459 -SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGY----------- 506
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
+ +GL+ Q F M YGI P EHYACM DLF
Sbjct: 507 ------------------------AKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLF 542
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
GR+G K ++++ +M +P +W ++ A R HGN GE AA L+E++P+++ Y+
Sbjct: 543 GRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYV 602
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYP 649
++NMY+AAG E A VR M++ + K PGC+WV+ G+ F D +P EIY
Sbjct: 603 QLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYS 662
Query: 650 LMDGLNELMKDAGY 663
+D + L+K+AGY
Sbjct: 663 KVDEMMLLIKEAGY 676
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 204/403 (50%), Gaps = 37/403 (9%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N L+ +K G+++ AR +FD MPERD+ +WNT+I Y++ +A KLF +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVK--- 88
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEI 302
N I WN + GY +G+ A L +M++ I + + L C+ + L G++I
Sbjct: 89 -NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQI 147
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME-EKGLITWNAMLSGFAHMDR 361
HGH ++TGFD+ NV N L+ MY++C + A LF+ ME EK +TW +ML+G++
Sbjct: 148 HGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGF 207
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
+ FR + EG + N T SVL CA ++ + G + HC I+K FK + + +
Sbjct: 208 AFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVK-SGFKTNIYVQS 266
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
L+DMYA+ ++ A+ + + + D V++ +MI G +G AL++F M + +K
Sbjct: 267 ALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKI 326
Query: 482 DHVAMVAVLT------------ACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
D + ++L + +H +V G ++ +V++ + D++
Sbjct: 327 DDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYK-LVNN-----------ALVDMY 374
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEW 572
+ G+++ A ++ M K + W L+ GNT G +
Sbjct: 375 AKRGIMDSALKVFEGMIEKDVIS-WTALVT-----GNTHNGSY 411
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/602 (28%), Positives = 289/602 (48%), Gaps = 37/602 (6%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRN 123
KQ+H +I+ +T ++ L+ F + ++ + +N LI+ FV N
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 124 ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH 183
LF E L + + + + FT+P VLKAC G+++H
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH--------------- 134
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
S+ K G F++ D + +++S Y+ G +A KLF+ + + V
Sbjct: 135 ----SLVVKCG--------FNH----DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV- 177
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
+ W + GY +G + A+ L +M + D +V L+AC H+G L G+ I
Sbjct: 178 ---VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
+ VR L+ +Y++CG + A +F M EK ++TW+ M+ G+A
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
E LF QML E +P+ +I L CA + L G E+ ++ R +F L + N
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANA 353
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
L+DMYA+ G + VF + +D V A I G G +++ +F + K I PD
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 483 HVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEII 542
+ +L C H+GL+ G F + Y + +EHY CM DL+GRAG+L+ A +I
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 543 TRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWS 602
MP +P +W L+ CR+ +T L E +L+ ++P ++G Y+ ++N+Y+ G W
Sbjct: 474 CDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWD 533
Query: 603 ELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAG 662
E AEVR M G+KK PG +W+++ G+ F D S+P + +IY ++ L M+ G
Sbjct: 534 EAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
Query: 663 YI 664
++
Sbjct: 594 FV 595
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 199/425 (46%), Gaps = 39/425 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C +S G LH+ V+ GF+ + + L+S Y+ +DA + + +
Sbjct: 120 ACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVT 179
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W L S + + EA+ ++KM+ V PD + VL AC + D SG + K +E
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
M + FV LV++YAK GK+E AR +FD+M E+D V+W+T+I YAS E +
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
LF +M +E ++ D ++V L++C+
Sbjct: 300 LFLQMLQENLKP----------------------------------DQFSIVGFLSSCAS 325
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNV--RNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+GAL LG+ G ++ + L N+ NALI MY++CG + + +F+ M+EK ++ N
Sbjct: 326 LGALDLGE--WGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMN 383
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
A +SG A V +F Q G P+ T +L C +Q G F I
Sbjct: 384 AAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCV 443
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVF-DSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
K + + +VD++ R+G + +A R+ D R + + + A++ G + + Q+A
Sbjct: 444 YALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET 503
Query: 470 IFEEM 474
+ +E+
Sbjct: 504 VLKEL 508
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 149/356 (41%), Gaps = 60/356 (16%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C++V L G+ + + + +N+ + LV+ YA+ + A V +S + +
Sbjct: 221 ACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVT 280
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W+ +I + N E + + +ML++ + PD+F+ L +C L A++
Sbjct: 281 WSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASL----------GALD 330
Query: 173 VGSMGWSL----------FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYA 222
+G G SL F+ NAL+ MYAK G + +F M E+D V N IS A
Sbjct: 331 LGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLA 390
Query: 223 SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVA 282
G +F +F + ++ G+ + + + G +HAG + L+
Sbjct: 391 KNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF-------------- 436
Query: 283 MVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME 342
NA S + ALK E +G ++ ++ R G L AY L M
Sbjct: 437 ----FNAISCVYALKRTVEHYG---------------CMVDLWGRAGMLDDAYRLICDMP 477
Query: 343 EK-GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEP----NYVTIASVLPLCAR 393
+ I W A+LSG + + ++++ EP NYV ++++ + R
Sbjct: 478 MRPNAIVWGALLSGCRLVKDTQLAETVLKELI--ALEPWNAGNYVQLSNIYSVGGR 531
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 250/436 (57%), Gaps = 4/436 (0%)
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLN 288
A K+F+ + + + + +W MA GY G+ + AL + M S I + ++ V L
Sbjct: 186 ARKIFDDVTDSSL-LTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALK 244
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
AC + L++G+ IH V+ V V N L+ +Y G A +F M E+ ++T
Sbjct: 245 ACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVT 304
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
WN+++S + RV E+ LFR+M E ++ T+ ++LP C+R+A L GKE H I+
Sbjct: 305 WNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQIL 364
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
K ++ + LL N+L+DMY + G+V ++RVFD + +D ++ M+ Y + G + +
Sbjct: 365 KSKEKPDVPLL-NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVI 423
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
N+FE M + + PD + VA+L+ CS +GL G LF+ M ++ + P +EHYAC+ D+
Sbjct: 424 NLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDI 483
Query: 529 FGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYY 588
GRAG + +A ++I MP+KP+ ++W +L+ +CR+HGN +GE AA +L ++P + G Y
Sbjct: 484 LGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNY 543
Query: 589 ILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSN-PHAGEI 647
++++N+YA A W + ++R M+ GVKK GC+WV V + F G ++ E
Sbjct: 544 VMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEY 603
Query: 648 YPLMDGLNELMKDAGY 663
+ L E ++ +GY
Sbjct: 604 KKVWTELQEAIEKSGY 619
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 4/239 (1%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C+++ L G+ +HAQ++ + ++ L+ Y LFDDA V + S +
Sbjct: 245 ACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVT 304
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN LIS+ + E + +RKM + + T ++L AC + +G E+H I
Sbjct: 305 WNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQIL 364
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ + N+L+ MY K G++E +R +FD M +D SWN +++CYA G E
Sbjct: 365 KSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVIN 424
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT----SIHLDHVAMVVGL 287
LFE M E GV + I + + G G + L L +M+T S L+H A +V +
Sbjct: 425 LFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDI 483
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 6/251 (2%)
Query: 319 NALITMYSRCGDLGHAYMLFQRMEEKGLIT---WNAMLSGFAHMDRVDEVSFLFRQMLHE 375
+ LIT++S C L A +F + + L+T W AM G++ + ++ ML
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 376 GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLE 435
EP +I+ L C + +L+ G+ H I+KR++ K +++N L+ +Y SG +
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKE-KVDQVVYNVLLKLYMESGLFDD 289
Query: 436 AKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSH 495
A++VFD ++ R+ VT+ ++I K N+F +M + I + +L ACS
Sbjct: 290 ARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSR 349
Query: 496 SGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWA 555
+ G+ + +++ P + + D++G+ G + ++ + M K A W
Sbjct: 350 VAALLTGKEIHAQILKSKE-KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDL-ASWN 407
Query: 556 TLIGACRIHGN 566
++ I+GN
Sbjct: 408 IMLNCYAINGN 418
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 285 bits (730), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 192/652 (29%), Positives = 315/652 (48%), Gaps = 84/652 (12%)
Query: 54 CINVNSLSPGKQLHAQVI--SLGFDQNTIMLPRLVSFYARFNLFDDACIVTES--SSSLE 109
CI +L G+ +H ++ SL +T+++ L YA N + A V + +
Sbjct: 9 CIRSRNLVLGQVIHQHLLKRSLTLSSSTVLV-NLTRLYASCNEVELARHVFDEIPHPRIN 67
Query: 110 PLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK 169
P+ W+++I + N+ +AL Y KML V P ++TYP VLKAC L G +H
Sbjct: 68 PIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHS 127
Query: 170 AIEVGSMGWSLFVH-------------------------------NALVSMYAKFGKLEV 198
+ ++V NA++S ++ L
Sbjct: 128 HVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTD 187
Query: 199 ARHLFDNMPERDDVSWN--TIISCYASRGTWG---------------------------- 228
LF +M D +S N TI+ + + G G
Sbjct: 188 VIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGIL 247
Query: 229 ------EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVA 282
+ R+ + + N + W+ M GGY+ K A ++ QM + D+VA
Sbjct: 248 DVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN---DNVA 304
Query: 283 MVVG------LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYM 336
MV L C+ G L G+ +H +AV+ GF + V+N +I+ Y++ G L A+
Sbjct: 305 MVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFR 364
Query: 337 LFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIAN 396
F + K +I++N++++G R +E LF +M G P+ T+ VL C+ +A
Sbjct: 365 QFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAA 424
Query: 397 LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIR 456
L HG H Y + + + N L+DMY + GK+ AKRVFD++ +RD V++ M+
Sbjct: 425 LGHGSSCHGYCVV-HGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLF 483
Query: 457 GYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV-DDYGI 515
G+G+ G G+ AL++F M + + PD V ++A+L+ACSHSGLV +G+ LF M D+ +
Sbjct: 484 GFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNV 543
Query: 516 IPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAG 575
IPRI+HY CM DL RAG L++A + + +MP++P + TL+ AC + N LG +
Sbjct: 544 IPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSK 603
Query: 576 KLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDV 627
K+ + + + +L++N Y+AA W + A +R + G+ K PG +WVDV
Sbjct: 604 KMQSLG-ETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 124/291 (42%), Gaps = 36/291 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC LS G+ +H + GF + + ++SFYA++ DA + +
Sbjct: 317 GCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVIS 376
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N LI+ V N E+ + +M + PD T VL AC L G H
Sbjct: 377 YNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV 436
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
V + + NAL+ MY K GKL+VA+ +FD M +RD VSWNT++ + G EA
Sbjct: 437 VHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALS 496
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
LF MQE GV + D V ++ L+ACSH
Sbjct: 497 LFNSMQETGV----------------------------------NPDEVTLLAILSACSH 522
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLFQRM 341
G + GK++ R F+V+ + N + + +R G L AY +M
Sbjct: 523 SGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 10/184 (5%)
Query: 386 SVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-- 443
S+L C R NL G+ H +++KR + L +YA +V A+ VFD +
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 444 TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQ 503
R + + + MIR Y + AL+++ +M ++P VL AC+ + G+
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 504 VLFQEM-VDDYGIIPRIEHYACMA--DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGA 560
++ + D+ + Y C A D + + G L A ++ MP + A W +I
Sbjct: 124 LIHSHVNCSDFA----TDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVA-WNAMISG 178
Query: 561 CRIH 564
+H
Sbjct: 179 FSLH 182
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/575 (29%), Positives = 286/575 (49%), Gaps = 40/575 (6%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNL-FDDACIVTESSSSLEPLH 112
C V S G Q HA V+ G + + + L+S Y + + V + + +
Sbjct: 71 CNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAIS 130
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W ++S +V + V+AL + +M+ + +EFT S +KAC EL + G H +
Sbjct: 131 WTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVI 190
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
W+ F+ + L +Y + AR +FD MPE D + W ++S ++ + EA
Sbjct: 191 THGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALG 250
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
LF M G + G+ G + L AC +
Sbjct: 251 LFYAMHR-------------GKGLVPDGSTFGTV--------------------LTACGN 277
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+ LK GKEIHG + G V ++L+ MY +CG + A +F M +K ++W+A+
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSAL 337
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
L G+ ++ +FR+M E + +VL CA +A ++ GKE H ++R
Sbjct: 338 LGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGC 393
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
F +++ + L+D+Y +SG + A RV+ ++ R+ +T+ AM+ G G+ A++ F
Sbjct: 394 FGN-VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
+M K IKPD+++ +A+LTAC H+G+V +G+ F M YGI P EHY+CM DL GRA
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA 512
Query: 533 GLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN-TVLGEWAAGKLLEMKPDHSGYYILI 591
GL +A+ ++ R + ++W L+G C + + + + E A +++E++P + Y+L+
Sbjct: 513 GLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLL 572
Query: 592 ANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVD 626
+NMY A G + +R M GV K G +W+D
Sbjct: 573 SNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/555 (24%), Positives = 242/555 (43%), Gaps = 69/555 (12%)
Query: 78 NTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKML 137
N I+L R S +A L T S SS P + ++ + +L EA+
Sbjct: 2 NLIILKRHFSQHASLCL-------TPSISSSAPTKQSRILELCKLGQL-TEAIRILNSTH 53
Query: 138 RKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGK-L 196
++ Y S+L+ C ++ G++ H + + V N+L+S+Y K G +
Sbjct: 54 SSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGM 113
Query: 197 EVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGY 256
R +FD +D +SW +++S Y + +A ++F M G++ N
Sbjct: 114 RETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDAN----------- 162
Query: 257 LHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDN 316
+ + ACS +G ++LG+ HG + GF+
Sbjct: 163 -----------------------EFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHF 199
Query: 317 VRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLH-E 375
+ + L +Y + A +F M E +I W A+LS F+ D +E LF M +
Sbjct: 200 ISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 259
Query: 376 GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLE 435
G P+ T +VL C + L+ GKE H ++ +++ ++L+DMY + G V E
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLIT-NGIGSNVVVESSLLDMYGKCGSVRE 318
Query: 436 AKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSH 495
A++VF+ +++++ V+++A++ GY GE + A+ IF EM + D VL AC+
Sbjct: 319 ARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAG 374
Query: 496 SGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWA 555
V G+ + + V G + + + DL+G++G ++ A + ++M + W
Sbjct: 375 LAAVRLGKEIHGQYVRR-GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWN 432
Query: 556 TLIGACRIHGNTVLGEWAAGKLLEM-----KPDHSGYYILIANMYAAAGCWSELAEVRTY 610
++ A +G GE A +M KPD YI + A G + E R Y
Sbjct: 433 AMLSALAQNGR---GEEAVSFFNDMVKKGIKPD----YISFIAILTACGHTGMVDEGRNY 485
Query: 611 M----RNLGVKKAPG 621
++ G+K PG
Sbjct: 486 FVLMAKSYGIK--PG 498
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/676 (27%), Positives = 329/676 (48%), Gaps = 77/676 (11%)
Query: 63 GKQLHAQVISLGFDQ-NTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFV 121
G +H +I G D +T ++ + FY R A + + + L WN ++ + +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 122 RNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLF 181
R+ + +A+ +R+M + T +L+ C A G ++H + + ++
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 182 VHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEG 241
+ N+L+ MY++ GKLE++R +F++M +R+ SWN+I+S Y G +A L + M+ G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 242 VEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGK 300
++ +I+ WN++ GY G K A+ +L +M+ + + ++ L A + G LKLGK
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 301 EIHGHAVRTG--FDVLDNVRNALITMYSRCGDLGHAYMLFQ------------------- 339
IHG+ +R +DV V LI MY + G L +A M+F
Sbjct: 246 AIHGYILRNQLWYDVY--VETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 340 ------------RMEEKGL----ITWNAMLSGFAHMDRVDE-----------------VS 366
RME++G+ ITWN++ SG+A + + ++ VS
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 367 F------------------LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
+ +F +M EG PN T++++L + ++ L GKE H + +
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
++ + + LVDMY +SG + A +F + + ++ M+ GY M G G+ +
Sbjct: 424 RKNLICDAYVA-TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
F M + ++PD + +VL+ C +SGLV +G F M YGIIP IEH +CM DL
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Query: 529 FGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYY 588
GR+G L++A + I M KP +W + +C+IH + L E A +L ++P +S Y
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANY 602
Query: 589 ILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIY 648
+++ N+Y+ W ++ +R MRN V+ +W+ + F+ ++P G+IY
Sbjct: 603 MMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Query: 649 PLMDGLNELMKDAGYI 664
+ L MK +GY+
Sbjct: 663 FELYKLVSEMKKSGYV 678
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 203/468 (43%), Gaps = 71/468 (15%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYAR----------FNLFDDACIVTE 103
C N + G+Q+H V+ LG + N M L+ Y+R FN D + +
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW 158
Query: 104 SS-----------------------SSLEP--LHWNMLISMFVRNELFVEALSAYRKMLR 138
+S L+P + WN L+S + L +A++ ++M
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 139 KQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEV 198
+ P + S+L+A E G +H I + + ++V L+ MY K G L
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 199 ARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLH 258
AR +FD M ++ V+WN+++S + +A L RM++EG++ + I WN++A GY
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 259 AGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIG----ALKL--------------- 298
G + AL ++ +M+ + + V+ + CS G ALK+
Sbjct: 339 LGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398
Query: 299 ----------------GKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME 342
GKE+HG +R V AL+ MY + GDL A +F ++
Sbjct: 399 MSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK 458
Query: 343 EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKE 402
K L +WN ML G+A R +E F ML G EP+ +T SVL +C +Q G +
Sbjct: 459 NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK 518
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVT 450
+ + R + + +VD+ RSG + EA +++ + + T
Sbjct: 519 YFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDAT 566
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/613 (29%), Positives = 299/613 (48%), Gaps = 41/613 (6%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNM 115
++ S + G+Q HA V+ + + + LV Y + L +D V W+
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 116 LISMFVRNELFVEALSAYRKMLRKQV--IPDEFTYPSVLKACGELLDCASGVEVH-KAIE 172
++S + EA+ + LR++ ++ + +VL + + G ++H I+
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
G +G+ + + NALV+MY+K L A +FD+ +R
Sbjct: 250 NGLLGF-VALSNALVTMYSKCESLNEACKMFDSSGDR----------------------- 285
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACS 291
N I W+ M GY G A+KL S+M ++ I +V LNACS
Sbjct: 286 ------------NSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACS 333
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
I L+ GK++H ++ GF+ AL+ MY++ G L A F ++E+ + W +
Sbjct: 334 DICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS 393
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
++SG+ +E L+R+M G PN T+ASVL C+ +A L+ GK+ H + +K
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH- 452
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIF 471
F + + + L MY++ G + + VF +D V++ AMI G G+G AL +F
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 472 EEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGR 531
EEM ++PD V V +++ACSH G V +G F M D G+ P+++HYACM DL R
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSR 572
Query: 532 AGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILI 591
AG L +AKE I +W L+ AC+ HG LG +A KL+ + S Y+ +
Sbjct: 573 AGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQL 632
Query: 592 ANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLM 651
+ +Y A G ++ V +MR GV K GC+W+++ ++ F VGDT +P E L+
Sbjct: 633 SGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLV 692
Query: 652 DGLNELMKDAGYI 664
++ M + G++
Sbjct: 693 CLVSRQMIEEGFV 705
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 232/517 (44%), Gaps = 50/517 (9%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLIS 118
+L G+ +H Q+I G LV+FYA+ A + + + + WN LI+
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 119 MFVRNELFVEALSA---YRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
+ +N + + +R+M + ++P+ +T + KA L G + H + S
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
++V +LV MY K G +E +F MPER
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER-------------------------- 182
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKL----LSQMRTSIHLDHV--AMVVGLNA 289
N W+TM GY G + A+K+ L + D+V A++ L A
Sbjct: 183 ---------NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
Query: 290 CSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
++G LG++IH ++ G + NAL+TMYS+C L A +F ++ ITW
Sbjct: 234 TIYVG---LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
+AM++G++ E LF +M G +P+ TI VL C+ I L+ GK+ H +++K
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
F+ +L LVDMYA++G + +A++ FD L RD +T++I GY + + AL
Sbjct: 351 L-GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALI 409
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
++ M I P+ M +VL ACS + G+ + + +G + + ++ ++
Sbjct: 410 LYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI-KHGFGLEVPIGSALSTMY 468
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN 566
+ G L + R P K + W +I +G
Sbjct: 469 SKCGSLEDGNLVFRRTPNKDVVS-WNAMISGLSHNGQ 504
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 121/252 (48%), Gaps = 6/252 (2%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C ++ L GKQLH+ ++ LGF+++ LV YA+ DA + + W
Sbjct: 332 CSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALW 391
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
LIS +V+N EAL YR+M +IP++ T SVLKAC L G +VH
Sbjct: 392 TSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK 451
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
G + + +AL +MY+K G LE +F P +D VSWN +IS + G EA +L
Sbjct: 452 HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALEL 511
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL----DHVAMVVGLNA 289
FE M EG+E + + + + H G + + M I L DH A +V L
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDL-- 569
Query: 290 CSHIGALKLGKE 301
S G LK KE
Sbjct: 570 LSRAGQLKEAKE 581
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/488 (32%), Positives = 258/488 (52%), Gaps = 42/488 (8%)
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERM--Q 238
F+ + LV Y + G A LFD MPERD VSWN++IS Y+ RG G+ F++ RM
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 239 EEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKL 298
E G N + + +M ++AC + G+ +
Sbjct: 127 EVGFRPNEVTFLSM----------------------------------ISACVYGGSKEE 152
Query: 299 GKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF 356
G+ IHG ++ F VL+ V+ NA I Y + GDL + LF+ + K L++WN M+
Sbjct: 153 GRCIHGLVMK--FGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
++ F G EP+ T +VL C + ++ + H IM F
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM-FGGFSGN 269
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK 476
+ L+D+Y++ G++ ++ VF +T D + +TAM+ Y G G+ A+ FE M
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 477 FKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLN 536
+ I PDHV +L ACSHSGLV +G+ F+ M Y I PR++HY+CM DL GR+GLL
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQ 389
Query: 537 KAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYA 596
A +I MP +P+ +W L+GACR++ +T LG AA +L E++P Y++++N+Y+
Sbjct: 390 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYS 449
Query: 597 AAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNE 656
A+G W + + +R M+ G+ +A GC++++ G + F VGD S+P + +I + + +
Sbjct: 450 ASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRK 509
Query: 657 LMK-DAGY 663
MK + GY
Sbjct: 510 KMKSEMGY 517
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 36/302 (11%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C+ S G+ +H V+ G + ++ +++Y + +C + E S + W
Sbjct: 144 CVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSW 203
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +I + ++N L + L+ + R PD+ T+ +VL++C ++ +H I
Sbjct: 204 NTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMF 263
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
G + + AL+ +Y+K G+LE + +F + D ++W +++ YA+ G +A K
Sbjct: 264 GGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKH 323
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI 293
FE M +H G I DHV LNACSH
Sbjct: 324 FELM-------------------VHYG---------------ISPDHVTFTHLLNACSHS 349
Query: 294 GALKLGKE-IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME-EKGLITWNA 351
G ++ GK + R D + + ++ + R G L AY L + M E W A
Sbjct: 350 GLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGA 409
Query: 352 ML 353
+L
Sbjct: 410 LL 411
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 134/295 (45%), Gaps = 26/295 (8%)
Query: 282 AMVVGLNACSHIGALKL--GKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQ 339
+++ + +C I +L K + + R GF + + L+ Y R G A LF
Sbjct: 36 SLIAAVKSCVSIELCRLLHCKVVKSVSYRHGF-----IGDQLVGCYLRLGHDVCAEKLFD 90
Query: 340 RMEEKGLITWNAMLSGFA---HMDRVDEVSFLFRQMLHE-GAEPNYVTIASVLPLCARIA 395
M E+ L++WN+++SG++ ++ + EV L R M+ E G PN VT S++ C
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEV--LSRMMISEVGFRPNEVTFLSMISACVYGG 148
Query: 396 NLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMI 455
+ + G+ H +MK +E ++ N ++ Y ++G + + ++F+ L+ ++ V++ MI
Sbjct: 149 SKEEGRCIHGLVMKFGVLEEVKVV-NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 456 RGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVA-----QGQVLFQEMV 510
+ G + L F + +PD +AVL +C G+V G ++F
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267
Query: 511 DDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHG 565
+ I + DL+ + G L + + + P W ++ A HG
Sbjct: 268 GNKCIT------TALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHG 315
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 282 bits (721), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 185/663 (27%), Positives = 303/663 (45%), Gaps = 58/663 (8%)
Query: 4 VHIASLKNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPG 63
+H+ SL H L+ AF+ FL A S +S+ C + SLS G
Sbjct: 53 LHLVSLSK---HRKLNEAFE-FLQEMDKAGVSVSSYSYQCLFE------ACRELRSLSHG 102
Query: 64 KQLHAQVISLGFDQNTIMLPRLV-SFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
+ LH + + +G + +++L V Y +DA + + S L + +IS +
Sbjct: 103 RLLHDR-MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAE 161
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
+ +A+ + ML P Y ++LK+ G ++H + + + +
Sbjct: 162 QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSI 221
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
+V+MY K G L A+ +FD M + V+ ++
Sbjct: 222 ETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMV----------------------- 258
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKE 301
GY AG + ALKL + T + D V L AC+ + L LGK+
Sbjct: 259 ------------GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQ 306
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
IH + G + +V L+ Y +C A FQ + E ++W+A++SG+ M +
Sbjct: 307 IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQ 366
Query: 362 VDEVSFLFRQMLHEGAEP-NYVTIASVLPLCARIANLQHGKEFHCYIMKRE----QFKEY 416
+E F+ + + A N T S+ C+ +A+ G + H +KR Q+ E
Sbjct: 367 FEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE- 425
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK 476
+ L+ MY++ G + +A VF+S+ D V +TA I G+ G AL +FE+M
Sbjct: 426 ----SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS 481
Query: 477 FKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLN 536
+KP+ V +AVLTACSH+GLV QG+ M+ Y + P I+HY CM D++ R+GLL+
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 537 KAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYA 596
+A + + MP++P W + C H N LGE A +L ++ P+ + Y+L N+Y
Sbjct: 542 EALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYT 601
Query: 597 AAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNE 656
AG W E AE+ M +KK C+W+ G+ F VGD +P EIY + +
Sbjct: 602 WAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDG 661
Query: 657 LMK 659
M+
Sbjct: 662 FME 664
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/581 (30%), Positives = 288/581 (49%), Gaps = 57/581 (9%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDD--ACIVTESSSSLEPLHWNM 115
+SL KQ+ Q+I+ ++ +++ ++V+F + F + I+ S L +N
Sbjct: 17 SSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNT 76
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
L+S + + + AY+ + PD FT+P V KACG+ G ++H V
Sbjct: 77 LLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGI--VTK 134
Query: 176 MGW--SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
MG+ ++V N+LV Y G+ A +F MP RD VSW II+
Sbjct: 135 MGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIIT-------------- 180
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI 293
G+ G +K AL S+M +L V L + +
Sbjct: 181 ---------------------GFTRTGLYKEALDTFSKMDVEPNL--ATYVCVLVSSGRV 217
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
G L LGK IHG ++ + NALI MY +C L A +F +E+K ++WN+M+
Sbjct: 218 GCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMI 277
Query: 354 SGFAHMDRVDEVSFLFRQM-LHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
SG H +R E LF M G +P+ + SVL CA + + HG+ H YI+
Sbjct: 278 SGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG- 336
Query: 413 FKEYLLLWNT-----LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
+ W+T +VDMYA+ G + A +F+ + ++ T+ A++ G + G G +
Sbjct: 337 -----IKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLES 391
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVD-DYGIIPRIEHYACMA 526
L FEEM K KP+ V +A L AC H+GLV +G+ F +M +Y + P++EHY CM
Sbjct: 392 LRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMI 451
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTV-LGEWAAGKLLEMKPDHS 585
DL RAGLL++A E++ MP KP + ++ AC+ G + L + L+++ + S
Sbjct: 452 DLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDS 511
Query: 586 GYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVD 626
G Y+L++N++AA W ++A +R M+ G+ K PG ++++
Sbjct: 512 GVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 180/407 (44%), Gaps = 43/407 (10%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + + GKQ+H V +GF + + LV FY +AC V + +
Sbjct: 115 ACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVS 174
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W +I+ F R L+ EAL + KM V P+ TY VL + G + + G +H I
Sbjct: 175 WTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLIL 231
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ SL NAL+ MY K +L A +F + ++D VSWN++IS
Sbjct: 232 KRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS------------- 278
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS--IHLDHVAMVVGLNAC 290
G +H K A+ L S M+TS I D + L+AC
Sbjct: 279 ----------------------GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSAC 316
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ +GA+ G+ +H + + G ++ A++ MY++CG + A +F + K + TWN
Sbjct: 317 ASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWN 376
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
A+L G A E F +M+ G +PN VT + L C + G+ + + MK
Sbjct: 377 ALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYF-HKMKS 435
Query: 411 EQFKEYLLL--WNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMI 455
++ + L + ++D+ R+G + EA + ++ + +V I
Sbjct: 436 REYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAI 482
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 122/276 (44%), Gaps = 8/276 (2%)
Query: 285 VGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGH--AYMLFQRME 342
V L S +L++ K+I + D + N ++T + D + +L
Sbjct: 8 VLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRS 67
Query: 343 EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKE 402
++N +LS +A D+ F ++ + G P+ T V C + + ++ GK+
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKG 462
H I+ + F + + + N+LV Y G+ A +VF + RD V++T +I G+ G
Sbjct: 128 IHG-IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 463 EGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHY 522
+ AL+ F +M ++P+ V VL + G ++ G+ + ++ +I +E
Sbjct: 187 LYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS-LETG 242
Query: 523 ACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
+ D++ + L+ A + + K W ++I
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELE-KKDKVSWNSMI 277
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 268/517 (51%), Gaps = 8/517 (1%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRN 123
+QLH V+ G+ N + +V Y + + DA V + + + WN+++ ++
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 124 ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH 183
EA+ + KML V P T SV+ AC L G +H S+ V
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
++ MY K +LE AR +FD +D SW + +S YA G EA +LF+ M E
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER--- 358
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSI-HLDHVAMVVGLNACSHIGALKLGKEI 302
NI+ WN M GGY+HA + AL L+ MR I ++D+V +V LN CS I +++GK+
Sbjct: 359 -NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA 417
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE-KGLITWNAMLSGFAHMDR 361
HG R G+D V NAL+ MY +CG L A + F++M E + ++WNA+L+G A + R
Sbjct: 418 HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGR 477
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
++ F M E A+P+ T+A++L CA I L GK H +++ R+ +K +++
Sbjct: 478 SEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLI-RDGYKIDVVIRG 535
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
+VDMY++ A VF RD + + ++IRG G + +F + +KP
Sbjct: 536 AMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKP 595
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
DHV + +L AC G V G F M Y I P++EHY CM +L+ + G L++ +E
Sbjct: 596 DHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEF 655
Query: 542 ITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLL 578
+ MP+ P M + AC+ + + LG WAA +L+
Sbjct: 656 LLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 136/561 (24%), Positives = 243/561 (43%), Gaps = 76/561 (13%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
+++ + +++ +L R + Y + DDA + E + WN +I+ +
Sbjct: 80 ARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQ 139
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
N + E +R+M R V E ++ VLK+CG +LD ++H A+ ++ +
Sbjct: 140 NGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDL 199
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
++V +Y K + AR +FD + DVSWN I+ Y G EA +F +M +
Sbjct: 200 ETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKM----L 255
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
E+N+ + L+ +S+ L ACS AL++GK I
Sbjct: 256 ELNV--------------------RPLNHTVSSVML----------ACSRSLALEVGKVI 285
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQR---------------------- 340
H AV+ V ++ MY +C L A +F +
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 341 ---------MEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLC 391
M E+ +++WNAML G+ H DE M E + VT+ +L +C
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVC 405
Query: 392 ARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTR-RDEVT 450
+ I+++Q GK+ H +I R + +++ N L+DMY + G + A F ++ RDEV+
Sbjct: 406 SGISDVQMGKQAHGFIY-RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS 464
Query: 451 YTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV 510
+ A++ G G + AL+ FE M + + KP + +L C++ + G+ + ++
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLI 523
Query: 511 DD-YGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVL 569
D Y I I M D++ + + A E+ + +W ++I C +G +
Sbjct: 524 RDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATRDL-ILWNSIIRGCCRNGRSK- 579
Query: 570 GEWAAGKLLE---MKPDHSGY 587
+ LLE +KPDH +
Sbjct: 580 EVFELFMLLENEGVKPDHVTF 600
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 2/226 (0%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL-EPLH 112
C ++ + GKQ H + G+D N I+ L+ Y + A I S L + +
Sbjct: 405 CSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS 464
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN L++ R +ALS + M + + P ++T ++L C + G +H +
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLI 523
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ + A+V MY+K + A +F RD + WN+II G E F+
Sbjct: 524 RDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFE 583
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL 278
LF ++ EGV+ + + + + + G+ + + S M T H+
Sbjct: 584 LFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHI 629
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC N+ +L+ GK +H +I G+ + ++ +V Y++ FD A V + +++ + +
Sbjct: 505 GCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLIL 564
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN +I RN E + + + V PD T+ +L+AC G + ++
Sbjct: 565 WNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMS 624
Query: 173 VG-SMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGE 229
+ + ++ ++ +Y K+G L MP + T I+ R W +
Sbjct: 625 TKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSK 682
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/635 (29%), Positives = 307/635 (48%), Gaps = 78/635 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + N ++ G+Q+H +V+ G D N + +++ YA+ L DA V + L+
Sbjct: 50 SCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSAS 109
Query: 113 WNMLISMFVR-------------------------------NELFVEALSAYRKMLRKQV 141
+N+++ +VR N + EA+ +R+M +
Sbjct: 110 FNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGI 169
Query: 142 IPDEFTYPSVLKAC---GELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEV 198
+ +E T +V+ AC G + DC + AI++ G +FV L+ MY L+
Sbjct: 170 MLNEVTLATVISACSHLGGIWDCRMLQSL--AIKLKLEG-RVFVSTNLLHMYCLCLCLKD 226
Query: 199 ARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLH 258
AR LFD MPER+ V+WN +++ Y+ G +A +LF+++ E+ +I+ W TM G L
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLR 282
Query: 259 AGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNV 317
AL ++M R + V MV L+A + G ++HG V+ GFD D +
Sbjct: 283 KNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFL 342
Query: 318 -------------------------------RNALITMYSRCGDLGHAYMLFQRMEEKGL 346
RNALI + + G + A +F + +K +
Sbjct: 343 QATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDI 402
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGKEFHC 405
+WNAM+SG+A LFR+M+ +P+ +T+ SV + + +L+ GK H
Sbjct: 403 FSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHD 462
Query: 406 YIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVT---YTAMIRGYGMKG 462
Y + L ++DMYA+ G + A +F T + A+I G G
Sbjct: 463 Y-LNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHG 521
Query: 463 EGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHY 522
++AL+++ ++ IKP+ + V VL+AC H+GLV G+ F+ M D+GI P I+HY
Sbjct: 522 HAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHY 581
Query: 523 ACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKP 582
CM DL G+AG L +AKE+I +MP K +W L+ A R HGN + E AA +L + P
Sbjct: 582 GCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDP 641
Query: 583 DHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVK 617
H G ++++N+YA AG W ++A VR MR V+
Sbjct: 642 SHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/540 (24%), Positives = 241/540 (44%), Gaps = 82/540 (15%)
Query: 145 EFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFD 204
E S L +C D G ++H + + + ++ N++++MYAK L A +F
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 205 NMPERDDVSWNTIISCYA-SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFK 263
+ + D S+N ++ Y SR W +A KLF+ M E + + + T+ GY +
Sbjct: 101 DHAKLDSASFNIMVDGYVRSRRLW-DALKLFDVMPER----SCVSYTTLIKGYAQNNQWS 155
Query: 264 GALKLLSQMRT-SIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALI 322
A++L +MR I L+ V + ++ACSH+G + + + A++ + V L+
Sbjct: 156 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLL 215
Query: 323 TMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFA------------------------- 357
MY C L A LF M E+ L+TWN ML+G++
Sbjct: 216 HMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGT 275
Query: 358 ------HMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR- 410
+++DE + +ML G +P+ V + +L AR G + H I+KR
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRG 335
Query: 411 -------------------------EQF----KEYLLLWNTLVDMYARSGKVLEAKRVFD 441
+QF K+++ N L+ + ++G V +A+ VFD
Sbjct: 336 FDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD 395
Query: 442 SLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM-CKFKIKPDHVAMVAVLTACSHSGLVA 500
+D ++ AMI GY Q+AL++F EM ++KPD + MV+V +A S G +
Sbjct: 396 QTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 501 QGQVLFQEMVDDYGIIPRIEHY-ACMADLFGRAGLLNKAKEII--TRMPYKPTPAMWATL 557
+G+ + ++ IP ++ A + D++ + G + A I T+ T + W +
Sbjct: 456 EGKRAHDYL--NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 558 IGACRIHGNT--VLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEV-RTYMRNL 614
I HG+ L ++ + L +KP+ + ++ +A C + L E+ +TY ++
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVL-----SACCHAGLVELGKTYFESM 568
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/579 (29%), Positives = 281/579 (48%), Gaps = 36/579 (6%)
Query: 85 LVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPD 144
L+S YA+ DA + + + + N++ F+RN ++ML D
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-D 154
Query: 145 EFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFD 204
T VL C C +H + + V N L++ Y K G R +FD
Sbjct: 155 HATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFD 214
Query: 205 NMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKG 264
M R+ ++ +IS + +LF M+
Sbjct: 215 GMSHRNVITLTAVISGLIENELHEDGLRLFSLMR-------------------------- 248
Query: 265 ALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITM 324
R +H + V + L ACS + G++IH + G + + +AL+ M
Sbjct: 249 --------RGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDM 300
Query: 325 YSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTI 384
YS+CG + A+ +F+ E ++ +L G A +E F +ML G E + +
Sbjct: 301 YSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVV 360
Query: 385 ASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT 444
++VL + +L GK+ H ++KR +F + N L++MY++ G + +++ VF +
Sbjct: 361 SAVLGVSFIDNSLGLGKQLHSLVIKR-KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
Query: 445 RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQV 504
+R+ V++ +MI + G G AL ++EEM ++KP V +++L ACSH GL+ +G+
Sbjct: 420 KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRE 479
Query: 505 LFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIH 564
L EM + +GI PR EHY C+ D+ GRAGLL +AK I +P KP +W L+GAC H
Sbjct: 480 LLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFH 539
Query: 565 GNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAW 624
G+T +GE+AA +L + PD S +ILIAN+Y++ G W E A+ M+ +GV K G +
Sbjct: 540 GDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISS 599
Query: 625 VDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
+++ + F V D +P A IY ++ GL +M D GY
Sbjct: 600 IEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGY 638
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 204/474 (43%), Gaps = 40/474 (8%)
Query: 10 KNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLHAQ 69
+N V++G L N + S GF H C K +HA
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTIVLSV---CDTPEFCLVTKMIHAL 180
Query: 70 VISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEA 129
I G+D+ + +L++ Y + V + S + +IS + NEL +
Sbjct: 181 AILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDG 240
Query: 130 LSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSM 189
L + M R V P+ TY S L AC G ++H + + L + +AL+ M
Sbjct: 241 LRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDM 300
Query: 190 YAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIW 249
Y+K G +E A +F++ E D+VS I+ A G+ EA + F RM + GVE++ +
Sbjct: 301 YSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV- 359
Query: 250 NTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRT 309
V+ V+G++ + +L LGK++H ++
Sbjct: 360 -------------------------------VSAVLGVSFIDN--SLGLGKQLHSLVIKR 386
Query: 310 GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLF 369
F V N LI MYS+CGDL + +F+RM ++ ++WN+M++ FA L+
Sbjct: 387 KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLY 446
Query: 370 RQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYAR 429
+M +P VT S+L C+ + + G+E + + + + ++DM R
Sbjct: 447 EEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGR 506
Query: 430 SGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
+G + EAK DSL + D + A++ G+ ++ E++ F+ PD
Sbjct: 507 AGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQL--FQTAPD 558
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 175/387 (45%), Gaps = 19/387 (4%)
Query: 212 VSWNTIISCYASRGTWGEAFKLFERM-QEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLS 270
V WN+++S YA G +A KLF+ M + + NI+ + G+L + LL
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFY-----GFLRNRETESGFVLLK 145
Query: 271 QMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGD 330
+M S DH + + L+ C + K IH A+ +G+D +V N LIT Y +CG
Sbjct: 146 RMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205
Query: 331 LGHAYMLFQRMEEKGLITWNAMLSGFA----HMDRVDEVSFLFRQMLHEGAEPNYVTIAS 386
+F M + +IT A++SG H D + S + R ++H PN VT S
Sbjct: 206 SVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVH----PNSVTYLS 261
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR 446
L C+ + G++ H + K + L + + L+DMY++ G + +A +F+S T
Sbjct: 262 ALAACSGSQRIVEGQQIHALLWKY-GIESELCIESALMDMYSKCGSIEDAWTIFESTTEV 320
Query: 447 DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLF 506
DEV+ T ++ G G + A+ F M + ++ D + AVL + G+ L
Sbjct: 321 DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQL- 379
Query: 507 QEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN 566
+V + +++ + G L ++ + RMP K W ++I A HG+
Sbjct: 380 HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGH 438
Query: 567 --TVLGEWAAGKLLEMKPDHSGYYILI 591
L + LE+KP + L+
Sbjct: 439 GLAALKLYEEMTTLEVKPTDVTFLSLL 465
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 14/293 (4%)
Query: 278 LDHVAMVVGLNACSHIGALK-LGKEIHGHAVRTG--FDVLDN--------VRNALITMYS 326
L+HV M + L+ C G LG +H ++ F+ +D V N+L+++Y+
Sbjct: 42 LNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYA 101
Query: 327 RCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIAS 386
+CG L A LF M + +I+ N + GF + L ++ML G ++ T+
Sbjct: 102 KCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-DHATLTI 160
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR 446
VL +C K H + KE + + N L+ Y + G + + VFD ++ R
Sbjct: 161 VLSVCDTPEFCLVTKMIHALAILSGYDKE-ISVGNKLITSYFKCGCSVSGRGVFDGMSHR 219
Query: 447 DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLF 506
+ +T TA+I G + L +F M + + P+ V ++ L ACS S + +GQ +
Sbjct: 220 NVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQI- 278
Query: 507 QEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIG 559
++ YGI + + + D++ + G + A I +M L+G
Sbjct: 279 HALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 36/221 (16%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLI 117
NSL GKQLH+ VI F NT + L++ Y++ D+ V + WN +I
Sbjct: 371 NSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMI 430
Query: 118 SMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVE-VHKAIEVGSM 176
+ F R+ + AL Y +M +V P + T+ S+L AC + G E +++ EV +
Sbjct: 431 AAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVS-WNTII----------------- 218
+ ++ M + G L+ A+ D++P + D W ++
Sbjct: 491 EPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAE 550
Query: 219 -----------------SCYASRGTWGEAFKLFERMQEEGV 242
+ Y+SRG W E K +RM+ GV
Sbjct: 551 QLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGV 591
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/589 (31%), Positives = 299/589 (50%), Gaps = 31/589 (5%)
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYA---RFNLFDDA-CIVTE---SSSSL----EPLHW 113
Q+H ++I G +N+ + R+V +A R L D A C+ E S S +P W
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 89
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +I + +AL ML V D+F+ VLKAC L G+++H ++
Sbjct: 90 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 149
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ LF+ N L+ +Y K G L ++R +FD MP+RD VS+N++I Y G A +L
Sbjct: 150 TGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAREL 209
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGN-FKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
F+ M E N+I WN+M GY + A KL + M + +M+ G
Sbjct: 210 FDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGY----- 262
Query: 293 IGALKLGKEIHGHAVRTGFDVL---DNVRNA-LITMYSRCGDLGHAYMLFQRMEEKGLIT 348
+K G+ + FDV+ D V A +I Y++ G + HA LF +M + ++
Sbjct: 263 ---VKHGRIEDAKGL---FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVA 316
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
+N+M++G+ E +F M E P+ T+ VLP A++ L + H YI
Sbjct: 317 YNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI 376
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
+++ QF L L+DMY++ G + A VF+ + + + AMI G + G G+ A
Sbjct: 377 VEK-QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESA 435
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMAD 527
++ ++ + +KPD + V VL ACSHSGLV +G + F+ M + I PR++HY CM D
Sbjct: 436 FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 495
Query: 528 LFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGY 587
+ R+G + AK +I MP +P +W T + AC H GE A L+ +
Sbjct: 496 ILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSS 555
Query: 588 YILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFV 636
Y+L++NMYA+ G W ++ VRT M+ ++K PGC+W+++ G FFV
Sbjct: 556 YVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 183/617 (29%), Positives = 300/617 (48%), Gaps = 51/617 (8%)
Query: 82 LPRLVSFYARFNLF----DDACI--------VTESSSSLEPLHWNMLISMFVRNELFVEA 129
L RL S+Y R ++F +D + + SSS LI + EA
Sbjct: 6 LSRLRSYYKRSSVFPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEA 65
Query: 130 LSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSM 189
+ + + V+ T+ V+ +L D E+ ++ ++ A+VS
Sbjct: 66 RKLFDGLPERDVV----TWTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSG 118
Query: 190 YAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIW 249
Y + +L +A LF MPER+ VSWNT+I YA G +A +LF+ M E NI+ W
Sbjct: 119 YLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSW 174
Query: 250 NTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGA-------------L 296
N+M + G A+ L +M + AMV GL + +
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII 234
Query: 297 KLGKEIHGHAVRTGFDVLDNV-----------RNALITMYSRCGDLGHAYMLFQRMEEKG 345
I G+A D D + N +IT + R ++ A LF RM EK
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 346 LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGA-EPNYVTIASVLPLCARIANLQHGKEFH 404
+I+W M++G+ +E +F +ML +G+ +PN T S+L C+ +A L G++ H
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 405 CYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDS--LTRRDEVTYTAMIRGYGMKG 462
I K K ++ + L++MY++SG+++ A+++FD+ + +RD +++ +MI Y G
Sbjct: 355 QLISKSVHQKNEIVT-SALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHG 413
Query: 463 EGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHY 522
G+ A+ ++ +M K KP V + +L ACSH+GLV +G F+++V D + R EHY
Sbjct: 414 HGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHY 473
Query: 523 ACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKP 582
C+ DL GRAG L I + + + + ++ AC +H + + K+LE
Sbjct: 474 TCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGS 533
Query: 583 DHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNP 642
D +G Y+L++N+YAA G E AE+R M+ G+KK PGC+WV VG + F VGD S+P
Sbjct: 534 DDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHP 593
Query: 643 HAGEIYPLMDGLNELMK 659
+ ++ L M+
Sbjct: 594 QFEALDSILSDLRNKMR 610
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 175/367 (47%), Gaps = 26/367 (7%)
Query: 76 DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRK 135
++N + ++ YA+ D A + + + WN ++ V+ EA++ + +
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFER 196
Query: 136 MLRKQVIP-----DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMY 190
M R+ V+ D + L DC E + W NA+++ Y
Sbjct: 197 MPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP--------ERNIISW-----NAMITGY 243
Query: 191 AKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWN 250
A+ +++ A LF MPERD SWNT+I+ + +A LF+RM E+ N+I W
Sbjct: 244 AQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWT 299
Query: 251 TMAGGYLHAGNFKGALKLLSQM--RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVR 308
TM GY+ + AL + S+M S+ + V L+ACS + L G++IH +
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 309 TGFDVLDNVRNALITMYSRCGDLGHAYMLFQR--MEEKGLITWNAMLSGFAHMDRVDEVS 366
+ + V +AL+ MYS+ G+L A +F + ++ LI+WN+M++ +AH E
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 367 FLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDM 426
++ QM G +P+ VT ++L C+ ++ G EF +++ E + LVD+
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDL 479
Query: 427 YARSGKV 433
R+G++
Sbjct: 480 CGRAGRL 486
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 284/586 (48%), Gaps = 51/586 (8%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYAR----FNLFDDACIVTESSSSLEPL 111
N SL QLH +I +N I L RL+ F NL A V ES
Sbjct: 15 NCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNL-SYARSVFESIDCPSVY 73
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN +I + + +AL Y++MLRK PD FT+P VLKAC L D G VH +
Sbjct: 74 IWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFV 133
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+++V L+ MY G++ +F+++P+ W
Sbjct: 134 VKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQ------------------W---- 171
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNAC 290
N++ W ++ G+++ F A++ +M+++ + + MV L AC
Sbjct: 172 -------------NVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC 218
Query: 291 SHIGALKLGKEIHGHAVRTGFD------VLDNV--RNALITMYSRCGDLGHAYMLFQRME 342
+ GK HG GFD V NV +LI MY++CGDL A LF M
Sbjct: 219 GRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP 278
Query: 343 EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKE 402
E+ L++WN++++G++ +E +F ML G P+ VT SV+ Q G+
Sbjct: 279 ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQS 338
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKG 462
H Y+ K K+ ++ LV+MYA++G AK+ F+ L ++D + +T +I G G
Sbjct: 339 IHAYVSKTGFVKDAAIVC-ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHG 397
Query: 463 EGQMALNIFEEMC-KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEH 521
G AL+IF+ M K PD + + VL ACSH GLV +GQ F EM D +G+ P +EH
Sbjct: 398 HGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEH 457
Query: 522 YACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMK 581
Y CM D+ RAG +A+ ++ MP KP +W L+ C IH N L + + E +
Sbjct: 458 YGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPE 517
Query: 582 PDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDV 627
SG Y+L++N+YA AG W+++ +R M++ V K G + V+
Sbjct: 518 ELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 191/415 (46%), Gaps = 44/415 (10%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + + G +H V+ GF+ N + L+ Y + V E +
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W LIS FV N F +A+ A+R+M V +E +L ACG D +G H ++
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 173 --------VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASR 224
+G+++ + +L+ MYAK G L AR+LFD MPER VSWN+II+ Y+
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 225 GTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMV 284
G EA +F M + G+ + + + LS +R S+
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTF-------------------LSVIRASM-------- 328
Query: 285 VGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK 344
+ CS +LG+ IH + +TGF + AL+ MY++ GD A F+ +E+K
Sbjct: 329 --IQGCS-----QLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 345 GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGKEF 403
I W ++ G A +E +F++M +G A P+ +T VL C+ I ++ G+ +
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVT-YTAMIRG 457
+ + + + +VD+ +R+G+ EA+R+ ++ + V + A++ G
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 171/588 (29%), Positives = 292/588 (49%), Gaps = 75/588 (12%)
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
L +N ++ + F + L+ + ++ + + PD FT P VLK+ G L G +VH
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ + +V N+L+ MYA GK+E+
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITH------------------------------ 101
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM--RTSIHLDHVAMVVGLN 288
K+F+ M + +++ WN + Y+ G F+ A+ + +M +++ D +V L+
Sbjct: 102 -KVFDEMPQR----DVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLS 156
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLG---------------- 332
ACS + L++G+ I+ V T F++ + NAL+ M+ +CG L
Sbjct: 157 ACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKC 215
Query: 333 ---------------HAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGA 377
A +LF+R K ++ W AM++G+ +R DE LFR M G
Sbjct: 216 WTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGI 275
Query: 378 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAK 437
P+ + S+L CA+ L+ GK H YI + + ++ LVDMYA+ G + A
Sbjct: 276 RPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVV-GTALVDMYAKCGCIETAL 334
Query: 438 RVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSG 497
VF + RD ++T++I G M G AL+++ EM ++ D + VAVLTAC+H G
Sbjct: 335 EVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGG 394
Query: 498 LVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAM---W 554
VA+G+ +F M + + + P+ EH +C+ DL RAGLL++A+E+I +M + + +
Sbjct: 395 FVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVY 454
Query: 555 ATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNL 614
+L+ A R +GN + E A KL +++ S + L+A++YA+A W ++ VR M++L
Sbjct: 455 CSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDL 514
Query: 615 GVKKAPGCAWVDVGGEFSPFFVGDT--SNPHAGEIYPLMDGLNELMKD 660
G++K PGC+ +++ G F VGD S+P EI ++ LM D
Sbjct: 515 GIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLMLD 562
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 206/423 (48%), Gaps = 11/423 (2%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+++H + G + ++ + L+ YA + V + + + WN LIS +V
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 123 NELFVEALSAYRKMLRKQVIP-DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLF 181
N F +A+ +++M ++ + DE T S L AC L + G +++ + V S+
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV-VTEFEMSVR 183
Query: 182 VHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEG 241
+ NALV M+ K G L+ AR +FD+M +++ W +++ Y S G EA LFER +
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK- 242
Query: 242 VEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGK 300
++++W M GY+ F AL+L M+T+ I D+ +V L C+ GAL+ GK
Sbjct: 243 ---DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
IHG+ V V AL+ MY++CG + A +F ++E+ +W +++ G A
Sbjct: 300 WIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNG 359
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLW 420
L+ +M + G + +T +VL C + G++ + +R +
Sbjct: 360 MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC 419
Query: 421 NTLVDMYARSGKVLEAKRVFDSLTRRDEVT----YTAMIRGYGMKGEGQMALNIFEEMCK 476
+ L+D+ R+G + EA+ + D + + T Y +++ G ++A + E++ K
Sbjct: 420 SCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEK 479
Query: 477 FKI 479
++
Sbjct: 480 VEV 482
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 173/354 (48%), Gaps = 37/354 (10%)
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
+++++N M +F L L ++R ++ D+ + V L + + + G+++H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
G+AV+ G + V N+L+ MY+ G + + +F M ++ +++WN ++S + R +
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 364 EVSFLFRQMLHEGA-EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
+ +F++M E + + TI S L C+ + NL+ G+ + +++ +F+ + + N
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT--EFEMSVRIGNA 187
Query: 423 LVDMYARSGKVLEAKRVFDSLTR-------------------------------RDEVTY 451
LVDM+ + G + +A+ VFDS+ +D V +
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 452 TAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVD 511
TAM+ GY AL +F M I+PD+ +V++LT C+ +G + QG+ + + +
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 512 DYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHG 565
+ + ++ A + D++ + G + A E+ + + T A W +LI ++G
Sbjct: 308 NRVTVDKVVGTA-LVDMYAKCGCIETALEVFYEIKERDT-ASWTSLIYGLAMNG 359
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 258/482 (53%), Gaps = 39/482 (8%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N L++ Y+K G +E+AR +FD M ER VS
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVS------------------------------ 129
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACS-HIGALKLGKE 301
WNTM G Y AL + +MR + L+AC + AL+ K+
Sbjct: 130 -----WNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC-KK 183
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
+H +V+T D+ V AL+ +Y++CG + A +F+ M++K +TW++M++G+
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWN 421
+E L+R+ E N T++SV+ C+ +A L GK+ H I K F + + +
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK-SGFGSNVFVAS 302
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
+ VDMYA+ G + E+ +F + ++ + +I G+ + + +FE+M + + P
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 362
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
+ V ++L+ C H+GLV +G+ F+ M YG+ P + HY+CM D+ GRAGLL++A E+
Sbjct: 363 NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 422
Query: 542 ITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCW 601
I +P+ PT ++W +L+ +CR++ N L E AA KL E++P+++G ++L++N+YAA W
Sbjct: 423 IKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQW 482
Query: 602 SELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDA 661
E+A+ R +R+ VKK G +W+D+ + F VG++ +P EI +D L +
Sbjct: 483 EEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKF 542
Query: 662 GY 663
GY
Sbjct: 543 GY 544
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 186/390 (47%), Gaps = 34/390 (8%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C ++ K H ++I + + + +L L++ Y++ + A V + + W
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 130
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +I ++ RN + EAL + +M + EFT SVL ACG D ++H
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVK 190
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ +L+V AL+ +YAK G ++ A +F++M ++ V+W+++++ Y + EA L
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI 293
+ R Q +E N +++ + ACS++
Sbjct: 251 YRRAQRMSLEQNQFTLSSV----------------------------------ICACSNL 276
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
AL GK++H ++GF V ++ + MY++CG L +Y++F ++EK L WN ++
Sbjct: 277 AALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTII 336
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
SGFA R EV LF +M +G PN VT +S+L +C ++ G+ F +
Sbjct: 337 SGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGL 396
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
++ ++ +VD+ R+G + EA + S+
Sbjct: 397 SPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 3/273 (1%)
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
L C+ GA+ K HG +R + + N LI YS+CG + A +F M E+ L
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
++WN M+ + E +F +M +EG + + TI+SVL C + K+ HC
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM 466
+K L + L+D+YA+ G + +A +VF+S+ + VT+++M+ GY +
Sbjct: 188 SVK-TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
AL ++ + ++ + + +V+ ACS+ + +G+ + ++ G + +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAV 305
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIG 559
D++ + G L ++ I + + K +W T+I
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEK-NLELWNTIIS 337
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C N+ +L GKQ+HA + GF N + V YA+ ++ I+
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN +IS F ++ E + + KM + + P+E T+ S+L CG G K +
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 173 VGSMGWSLFV--HNALVSMYAKFGKLEVARHLFDNMPERDDVS-WNTII-SCYASRG--- 225
+ G S V ++ +V + + G L A L ++P S W +++ SC +
Sbjct: 392 T-TYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLEL 450
Query: 226 TWGEAFKLFERMQEEGVEMNIIIWNTMAGG 255
A KLFE ++ E ++++ N A
Sbjct: 451 AEVAAEKLFE-LEPENAGNHVLLSNIYAAN 479
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 247/471 (52%), Gaps = 8/471 (1%)
Query: 196 LEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGG 255
L A+ +FD D WN +I ++ + L++RM N + ++
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 256 YLHAGNFKGALKLLSQMRTSIHLDHVAMVVGL-NACSHIGALKLGKEIHGHAVRTGFDVL 314
+ F+ ++ +Q+ + + V V L N+ + G KL H +
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLA-----HLLFDRIPEP 179
Query: 315 DNVR-NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQML 373
D+V N++I Y + G + A LF++M EK I+W M+SG+ D E LF +M
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 374 HEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKV 433
+ EP+ V++A+ L CA++ L+ GK H Y+ K + + +L L+DMYA+ G++
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK-TRIRMDSVLGCVLIDMYAKCGEM 298
Query: 434 LEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTAC 493
EA VF ++ ++ +TA+I GY G G+ A++ F EM K IKP+ + AVLTAC
Sbjct: 299 EEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358
Query: 494 SHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAM 553
S++GLV +G+++F M DY + P IEHY C+ DL GRAGLL++AK I MP KP +
Sbjct: 359 SYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 418
Query: 554 WATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRN 613
W L+ ACRIH N LGE L+ + P H G Y+ AN++A W + AE R M+
Sbjct: 419 WGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKE 478
Query: 614 LGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
GV K PGC+ + + G F GD S+P +I + +++ GY+
Sbjct: 479 QGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYV 529
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 210/400 (52%), Gaps = 11/400 (2%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSF---YARFNLFDDACIVTESSSSLEPLHWNMLISMF 120
KQ+HA+++ G Q++ + + +SF + A IV + + WN++I F
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 121 VRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL 180
++ +L Y++ML + +T+PS+LKAC L ++H I +
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
+ N+L++ YA G ++A LFD +PE DDVSWN++I Y G A LF +M E+
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLG 299
N I W TM GY+ A K AL+L +M+ S + D+V++ L+AC+ +GAL+ G
Sbjct: 211 ----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 300 KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHM 359
K IH + +T + + LI MY++CG++ A +F+ +++K + W A++SG+A+
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE-QFKEYLL 418
E F +M G +PN +T +VL C+ ++ GK Y M+R+ K +
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPTIE 385
Query: 419 LWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRG 457
+ +VD+ R+G + EAKR + + + V + A+++
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/578 (30%), Positives = 283/578 (48%), Gaps = 45/578 (7%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + + Q+HA V GF ++ + L+S Y++ D + V E ++ +
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 113 W-NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCAS-GVEVHKA 170
N++I+ F +++ +A+ + +ML++ + DEF+ S+L +LDC + G +VH
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS----VLDCLNLGKQVHGY 475
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ L V ++L ++Y+K G LE + LF +P +D+
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA------------------ 517
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNA 289
W +M G+ G + A+ L S+M D + L
Sbjct: 518 -----------------CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 290 CSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
CS +L GKEIHG+ +R G D ++ +AL+ MYS+CG L A ++ R+ E ++
Sbjct: 561 CSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSC 620
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
++++SG++ + + LFR M+ G + I+S+L A G + H YI K
Sbjct: 621 SSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITK 680
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
E + ++L+ MY++ G + + + F + D + +TA+I Y G+ AL
Sbjct: 681 IGLCTE-PSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQ 739
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
++ M + KPD V V VL+ACSH GLV + MV DYGI P HY CM D
Sbjct: 740 VYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDAL 799
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
GR+G L +A+ I M KP +W TL+ AC+IHG LG+ AA K +E++P +G YI
Sbjct: 800 GRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYI 859
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDV 627
++N+ A G W E+ E R M+ GV+K PG W V
Sbjct: 860 SLSNILAEVGEWDEVEETRKLMKGTGVQKEPG--WSSV 895
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 145/582 (24%), Positives = 246/582 (42%), Gaps = 73/582 (12%)
Query: 70 VISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEA 129
I +G+ ++ L+ +++ F+DA V S S WN +I+ +RN+ +
Sbjct: 176 TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAV 235
Query: 130 LSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGSMGWSLFVHNALVS 188
+ +M PD +TY SVL AC L G V + I+ G+ +FV A+V
Sbjct: 236 FDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE--DVFVCTAIVD 293
Query: 189 MYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIII 248
+YAK G + A +F +P VSW ++S Y A ++F+ M+ GVE+N
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353
Query: 249 WNTM-----------AGGYLHAGNFKGALKLLSQMRTSI------------------HLD 279
++ +HA FK L S + ++ LD
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 280 HV-------AMVVGLNACSHIG-ALKLGKEIHGHAVRTG-------FDVLD--------- 315
+ M+ + G A++L + +RT VLD
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVH 473
Query: 316 ------------NVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
V ++L T+YS+CG L +Y LFQ + K W +M+SGF +
Sbjct: 474 GYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR 533
Query: 364 EVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTL 423
E LF +ML +G P+ T+A+VL +C+ +L GKE H Y + R + + L + L
Sbjct: 534 EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL-RAGIDKGMDLGSAL 592
Query: 424 VDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDH 483
V+MY++ G + A++V+D L D V+ +++I GY G Q +F +M D
Sbjct: 593 VNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDS 652
Query: 484 VAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIIT 543
A+ ++L A + S + G + + G+ + + ++ + G ++ + +
Sbjct: 653 FAISSILKAAALSDESSLGAQV-HAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFS 711
Query: 544 RMPYKPTPAMWATLIGACRIHG--NTVLGEWAAGKLLEMKPD 583
++ P W LI + HG N L + K KPD
Sbjct: 712 QIN-GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPD 752
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 148/328 (45%), Gaps = 36/328 (10%)
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ + +F+ +L+S Y+ G + A LFD +P+ D VS N +IS Y + E+ + F
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGA 295
+M G E N I + ++ ++ACS + A
Sbjct: 140 KMHFLGFEANEISYGSV----------------------------------ISACSALQA 165
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSG 355
+ + H ++ G+ + V +ALI ++S+ AY +F+ + WN +++G
Sbjct: 166 PLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG 225
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKE 415
V LF +M +P+ T +SVL CA + L+ GK ++K E
Sbjct: 226 ALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG--AE 283
Query: 416 YLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
+ + +VD+YA+ G + EA VF + V++T M+ GY + AL IF+EM
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR 343
Query: 476 KFKIKPDHVAMVAVLTACSHSGLVAQGQ 503
++ ++ + +V++AC +V +
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEAS 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 392 ARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTY 451
+R+ NL+ K ++++R + L +L+ Y+ SG + +A ++FD++ + D V+
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 452 TAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV 510
MI GY + +L F +M + + ++ +V++ACS A LF E+V
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACS-----ALQAPLFSELV 172
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 238/417 (57%), Gaps = 3/417 (0%)
Query: 249 WNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAV 307
+NTM GY++ +F+ AL ++M + D+ L AC+ + +++ GK+IHG
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 308 RTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSF 367
+ G + V+N+LI MY RCG++ + +F+++E K +W++M+S A M E
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 368 LFRQMLHE-GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDM 426
LFR M E + + S L CA L G H +++ R + +++ +LVDM
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL-RNISELNIIVQTSLVDM 278
Query: 427 YARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAM 486
Y + G + +A +F + +R+ +TY+AMI G + GEG+ AL +F +M K ++PDHV
Sbjct: 279 YVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVY 338
Query: 487 VAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMP 546
V+VL ACSHSGLV +G+ +F EM+ + + P EHY C+ DL GRAGLL +A E I +P
Sbjct: 339 VSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Query: 547 YKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAE 606
+ +W T + CR+ N LG+ AA +LL++ + G Y+LI+N+Y+ W ++A
Sbjct: 399 IEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVAR 458
Query: 607 VRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
RT + G+K+ PG + V++ G+ F D S+P EIY ++ + +K GY
Sbjct: 459 TRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGY 515
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 168/352 (47%), Gaps = 43/352 (12%)
Query: 92 FNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSV 151
F DD C +N +I +V F EAL Y +M+++ PD FTYP +
Sbjct: 89 FRGIDDPCT----------FDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 152 LKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDD 211
LKAC L G ++H + + +FV N+L++MY + G++E++ +F+ + +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 212 VSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQ 271
SW++++S A G W E LF M E
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSE------------------------------- 227
Query: 272 MRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDL 331
T++ + MV L AC++ GAL LG IHG +R ++ V+ +L+ MY +CG L
Sbjct: 228 --TNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCL 285
Query: 332 GHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLC 391
A +FQ+ME++ +T++AM+SG A + +F +M+ EG EP++V SVL C
Sbjct: 286 DKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNAC 345
Query: 392 ARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
+ ++ G+ ++K + + + LVD+ R+G + EA S+
Sbjct: 346 SHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSI 397
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 37/305 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + S+ GKQ+H QV LG + + + L++ Y R + + V E S
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIP-DEFTYPSVLKACGELLDCASGVEVHKAI 171
W+ ++S ++ E L +R M + + +E S L AC G+ +H +
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
++ V +LV MY K G L+ A H+F M +R++++++ +IS A G A
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESAL 320
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
++F +M +EG+E + +++ V LNACS
Sbjct: 321 RMFSKMIKEGLEPDHVVY----------------------------------VSVLNACS 346
Query: 292 HIGALKLGKEIHGHAVRTG-FDVLDNVRNALITMYSRCGDLGHAYMLFQRME-EKGLITW 349
H G +K G+ + ++ G + L+ + R G L A Q + EK + W
Sbjct: 347 HSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIW 406
Query: 350 NAMLS 354
LS
Sbjct: 407 RTFLS 411
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 135/276 (48%), Gaps = 7/276 (2%)
Query: 331 LGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPL 390
+ +A +F+ +++ +N M+ G+ ++ +E + +M+ G EP+ T +L
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 391 CARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVT 450
C R+ +++ GK+ H + K + + + N+L++MY R G++ + VF+ L + +
Sbjct: 142 CTRLKSIREGKQIHGQVFKL-GLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 451 YTAMIRGYGMKGEGQMALNIFEEMC-KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
+++M+ G L +F MC + +K + MV+ L AC+++G + G + +
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 510 VDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVL 569
+ + + I + + D++ + G L+KA I +M K ++ +I +HG
Sbjct: 261 LRNISELNIIVQTS-LVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGES 318
Query: 570 GEWAAGKLLE--MKPDHSGYYILIANMYAAAGCWSE 603
K+++ ++PDH Y+ + N + +G E
Sbjct: 319 ALRMFSKMIKEGLEPDHV-VYVSVLNACSHSGLVKE 353
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 272/523 (52%), Gaps = 43/523 (8%)
Query: 147 TYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNM 206
TY ++++AC L V+ + ++ N ++ M+ K G + AR LFD +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 207 PERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGAL 266
PER+ S+ +IIS + + G + EAF+LF+ M W ++ H
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMM-----------WEELSDCETHT------- 226
Query: 267 KLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDN--VRNALITM 324
V L A + +G++ +GK++H A++ G V+DN V LI M
Sbjct: 227 ----------------FAVMLRASAGLGSIYVGKQLHVCALKLG--VVDNTFVSCGLIDM 268
Query: 325 YSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTI 384
YS+CGD+ A F+ M EK + WN +++G+A +E L M G + T+
Sbjct: 269 YSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTL 328
Query: 385 ASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT 444
+ ++ + ++A L+ K+ H ++ R F+ ++ LVD Y++ G+V A+ VFD L
Sbjct: 329 SIMIRISTKLAKLELTKQAHASLI-RNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP 387
Query: 445 RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQV 504
R++ +++ A++ GY G G A+ +FE+M + P+HV +AVL+AC++SGL QG
Sbjct: 388 RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWE 447
Query: 505 LFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIH 564
+F M + +GI PR HYACM +L GR GLL++A I R P K T MWA L+ ACR+
Sbjct: 448 IFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQ 507
Query: 565 GNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAW 624
N LG A KL M P+ G Y+++ NMY + G +E A V + + G+ P C W
Sbjct: 508 ENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTW 567
Query: 625 VDVGGEFSPFFVGDTSNPH----AGEIYPLMDGLNELMKDAGY 663
V+VG + F GD + + +IY +D L E + + GY
Sbjct: 568 VEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGY 610
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 175/385 (45%), Gaps = 36/385 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
CI + S+ K+++ ++S GF+ M+ R++ + + + DA + +
Sbjct: 132 ACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYS 191
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AI 171
+ +IS FV +VEA ++ M + + T+ +L+A L G ++H A+
Sbjct: 192 YYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCAL 251
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
++G + + FV L+ MY+K G +E AR F+ MPE+ V+WN +I+ YA G EA
Sbjct: 252 KLGVVD-NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEAL 310
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
L M++ GV +D + + + +
Sbjct: 311 CLLYDMRDSGVS----------------------------------IDQFTLSIMIRIST 336
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
+ L+L K+ H +R GF+ AL+ YS+ G + A +F ++ K +I+WNA
Sbjct: 337 KLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNA 396
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
++ G+A+ R + LF +M+ PN+VT +VL CA + G E + +
Sbjct: 397 LMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVH 456
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEA 436
K + + ++++ R G + EA
Sbjct: 457 GIKPRAMHYACMIELLGRDGLLDEA 481
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 152/369 (41%), Gaps = 53/369 (14%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNML 116
+ S+ GKQLH + LG NT + L+ Y++ +DA E + WN +
Sbjct: 237 LGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNV 296
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSM 176
I+ + + EAL M V D+FT +++ +L + H ++
Sbjct: 297 IAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF 356
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
+ + ALV Y+K+G+++ AR++FD +P ++ +SWN ++ YA+ G +A KLFE+
Sbjct: 357 ESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEK 416
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIH------------------- 277
M V N + + + ++G + ++ M + +H
Sbjct: 417 MIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM-SEVHGIKPRAMHYACMIELLGRD 475
Query: 278 --LDHVAMVVG--------------LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNAL 321
LD + LNAC L+LG+ + G + L N +
Sbjct: 476 GLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYV-VM 534
Query: 322 ITMYSRCGDLGHAYMLFQRMEEKGL-----ITW-------NAMLSGFAHMDRVDEVSFLF 369
MY+ G A + + +E KGL TW ++ LSG DR D +
Sbjct: 535 YNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSG----DRFDSYNETV 590
Query: 370 RQMLHEGAE 378
++ +++ +
Sbjct: 591 KRQIYQKVD 599
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/623 (27%), Positives = 290/623 (46%), Gaps = 38/623 (6%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+ +H V+ G + + L Y + + DDA V + + WN L+ +V+
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
N EA+ + M ++ V P T + L A + G + H V M +
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
+L++ Y K G +E A +FD M E+D V+WN IIS Y +G +A + + M+ E +
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKL 371
Query: 243 EMNIIIWNTMAGGYLHAGNFK-GALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKE 301
+ + + T+ N K G +R S D V ++ + G++ K+
Sbjct: 372 KYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKK 431
Query: 302 I------------------------HGHAVRTGFDV-LDNVR------NALITMYSRCGD 330
+ G A+R + + L+ V N +I R G
Sbjct: 432 VFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 331 LGHAYMLFQRMEEKG----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIAS 386
+ A +F +M+ G LI+W M++G +E R+M G PN +I
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR 446
L CA +A+L G+ H YI++ Q + + +LVDMYA+ G + +A++VF S
Sbjct: 552 ALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS 611
Query: 447 DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLF 506
+ AMI Y + G + A+ ++ + +KPD++ + VL+AC+H+G + Q +F
Sbjct: 612 ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIF 671
Query: 507 QEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN 566
++V + P +EHY M DL AG KA +I MP+KP M +L+ +C
Sbjct: 672 TDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRK 731
Query: 567 TVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVD 626
T L ++ + KLLE +P++SG Y+ I+N YA G W E+ ++R M+ G+KK PGC+W+
Sbjct: 732 TELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQ 791
Query: 627 VGGE--FSPFFVGDTSNPHAGEI 647
+ GE F D ++ EI
Sbjct: 792 ITGEEGVHVFVANDKTHTRINEI 814
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/514 (27%), Positives = 253/514 (49%), Gaps = 41/514 (7%)
Query: 53 GCINVNSLSPGKQLHAQVISLG--FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEP 110
GC+ LS GKQ+HA+++ G + +N + +LV FYA+ + + A ++
Sbjct: 79 GCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNV 138
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
W +I + R L AL + +ML ++ PD F P+V KACG L G VH
Sbjct: 139 FSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGY 198
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ + +FV ++L MY K G L+ A +FD +P+R+ V+WN ++ Y G EA
Sbjct: 199 VVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEA 258
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
+LF M+++GVE V + L+A
Sbjct: 259 IRLFSDMRKQGVEPT----------------------------------RVTVSTCLSAS 284
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+++G ++ GK+ H A+ G ++ + + +L+ Y + G + +A M+F RM EK ++TWN
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
++SG+ V++ ++ + M E + + VT+A+++ AR NL+ GKE CY + R
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI-R 403
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
F+ ++L +T++DMYA+ G +++AK+VFDS +D + + ++ Y G AL +
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRL 463
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
F M + P+ + ++ + +G V + + +F +M GIIP + + M +
Sbjct: 464 FYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMV 522
Query: 531 RAGLLNKAKEIITRMP---YKPTPAMWATLIGAC 561
+ G +A + +M +P + AC
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 123/253 (48%), Gaps = 16/253 (6%)
Query: 260 GNFKGALKLLSQMRTSIHLDHVAMVVG-------LNACSHIGALKLGKEIHGHAVRTG-- 310
G K AL L+++M D + +G L C + L GK+IH ++ G
Sbjct: 49 GEIKEALSLVTEM------DFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDF 102
Query: 311 FDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFR 370
+ + + L+ Y++C L A +LF ++ + + +W A++ + + F
Sbjct: 103 YARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFV 162
Query: 371 QMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARS 430
+ML P+ + +V C + + G+ H Y++K ++ + + ++L DMY +
Sbjct: 163 EMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVK-SGLEDCVFVASSLADMYGKC 221
Query: 431 GKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVL 490
G + +A +VFD + R+ V + A++ GY G+ + A+ +F +M K ++P V + L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 491 TACSHSGLVAQGQ 503
+A ++ G V +G+
Sbjct: 282 SASANMGGVEEGK 294
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQF---KEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
+L C +L GK+ H I+K F EY+ LV YA+ + A+ +F L
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYI--ETKLVIFYAKCDALEIAEVLFSKL 133
Query: 444 TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTAC-----SHSGL 498
R+ ++ A+I G + AL F EM + +I PD+ + V AC S G
Sbjct: 134 RVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGR 193
Query: 499 VAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
G V+ + D + + +AD++G+ G+L+ A ++ +P + A A ++
Sbjct: 194 GVHGYVVKSGLEDCVFVA------SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMV 247
Query: 559 G 559
G
Sbjct: 248 G 248
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 243/445 (54%), Gaps = 10/445 (2%)
Query: 223 SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQ-MRTSIHLDHV 281
+ + A LFE M E +I+I+N+MA GY N L + + I D+
Sbjct: 75 TESSMSYARHLFEAMSEP----DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNY 130
Query: 282 AMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLFQ 339
L AC+ AL+ G+++H +++ G D DNV LI MY+ C D+ A +F
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLD--DNVYVCPTLINMYTECEDVDSARCVFD 188
Query: 340 RMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQH 399
R+ E ++ +NAM++G+A +R +E LFR+M + +PN +T+ SVL CA + +L
Sbjct: 189 RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDL 248
Query: 400 GKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYG 459
GK H Y K+ F +Y+ + L+DM+A+ G + +A +F+ + +D ++AMI Y
Sbjct: 249 GKWIHKY-AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYA 307
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI 519
G+ + ++ +FE M ++PD + + +L ACSH+G V +G+ F +MV +GI+P I
Sbjct: 308 NHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSI 367
Query: 520 EHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLE 579
+HY M DL RAG L A E I ++P PTP +W L+ AC H N L E + ++ E
Sbjct: 368 KHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427
Query: 580 MKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDT 639
+ H G Y++++N+YA W + +R M++ K PGC+ ++V FF GD
Sbjct: 428 LDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDG 487
Query: 640 SNPHAGEIYPLMDGLNELMKDAGYI 664
+++ +D + + +K +GY+
Sbjct: 488 VKSATTKLHRALDEMVKELKLSGYV 512
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 153/317 (48%), Gaps = 34/317 (10%)
Query: 127 VEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNAL 186
+E S + ++L ++PD +T+PS+LKAC G ++H + +++V L
Sbjct: 111 LEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTL 170
Query: 187 VSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
++MY + ++ AR +FD + E V +N +I+ YA R EA LF MQ
Sbjct: 171 INMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ-------- 222
Query: 247 IIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHA 306
G YL + + ++ L++C+ +G+L LGK IH +A
Sbjct: 223 -------GKYLKP-------------------NEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 307 VRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVS 366
+ F V ALI M+++CG L A +F++M K W+AM+ +A+ + ++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 367 FLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDM 426
+F +M E +P+ +T +L C+ ++ G+++ ++ + + + ++VD+
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 427 YARSGKVLEAKRVFDSL 443
+R+G + +A D L
Sbjct: 377 LSRAGNLEDAYEFIDKL 393
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 38/314 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C +L G+QLH + LG D N + P L++ Y D A V + +
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N +I+ + R EALS +R+M K + P+E T SVL +C L G +HK +
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
S + V+ AL+ M+AK G L+ A +F+ M +D +W+ +I YA+ G ++
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
+FERM+ E V+ + I F G L NACSH
Sbjct: 318 MFERMRSENVQPDEI-------------TFLGLL---------------------NACSH 343
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRN--ALITMYSRCGDLGHAYMLFQRME-EKGLITW 349
G ++ G++ V + F ++ ++++ +++ + SR G+L AY ++ + W
Sbjct: 344 TGRVEEGRKYFSQMV-SKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLW 402
Query: 350 NAMLSGFAHMDRVD 363
+L+ + + +D
Sbjct: 403 RILLAACSSHNNLD 416
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 242/438 (55%), Gaps = 8/438 (1%)
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLN 288
A ++F+ M + I +WNT+ GY+ +L L +MR + D +
Sbjct: 62 ARQVFDEMHKP----RIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVK 117
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
A S +G G +H H V+ GF L V L+ MY + G+L A LF+ M+ K L+
Sbjct: 118 AISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVA 177
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
WNA L+ F +M + + + T+ S+L C ++ +L+ G+E +
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDR-A 236
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMAL 468
++E+ +++ N +DM+ + G A+ +F+ + +R+ V+++ MI GY M G+ + AL
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV--DDYGIIPRIEHYACMA 526
+F M ++P++V + VL+ACSH+GLV +G+ F MV +D + PR EHYACM
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMV 356
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSG 586
DL GR+GLL +A E I +MP +P +W L+GAC +H + +LG+ A L+E PD
Sbjct: 357 DLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGS 416
Query: 587 YYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGE 646
Y++L++N+YAAAG W + +VR+ MR LG KK + V+ G+ F GD S+P +
Sbjct: 417 YHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKA 476
Query: 647 IYPLMDGLNELMKDAGYI 664
IY +D + + ++ GY+
Sbjct: 477 IYEKLDEILKKIRKMGYV 494
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 178/381 (46%), Gaps = 48/381 (12%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEP---LHWNMLISMF 120
K++HA V+ GF + +L +L+ + D C + + WN L +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLE---NLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 121 VRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL 180
VRN+L E+L Y+KM V PDEFTYP V+KA +L D + G +H + G
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
V LV MY KFG+L A LF++M +D V+WN ++ G A + F +M +
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGK 300
V+ D +V L+AC +G+L++G+
Sbjct: 205 AVQ----------------------------------FDSFTVVSMLSACGQLGSLEIGE 230
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
EI+ A + D V NA + M+ +CG+ A +LF+ M+++ +++W+ M+ G+A
Sbjct: 231 EIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNG 290
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR-----EQFKE 415
E LF M +EG PNYVT VL C+ + GK + +++ E KE
Sbjct: 291 DSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKE 350
Query: 416 YLLLWNTLVDMYARSGKVLEA 436
+ + +VD+ RSG + EA
Sbjct: 351 H---YACMVDLLGRSGLLEEA 368
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 131/312 (41%), Gaps = 39/312 (12%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNM 115
+ S G LHA V+ GF I+ LV Y +F A + ES + + WN
Sbjct: 121 QLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
+++ V+ AL + KM V D FT S+L ACG+L G E++
Sbjct: 181 FLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEE 240
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ ++ V NA + M+ K G E AR LF+ M +R+ VSW+T+I YA G EA LF
Sbjct: 241 IDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFT 300
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGA 295
MQ EG+ N +V + L+ACSH G
Sbjct: 301 TMQNEGLRPN----------------------------------YVTFLGVLSACSHAGL 326
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRN---ALITMYSRCGDLGHAYMLFQRME-EKGLITWNA 351
+ GK V++ L+ + ++ + R G L AY ++M E W A
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 352 MLSGFA-HMDRV 362
+L A H D +
Sbjct: 387 LLGACAVHRDMI 398
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 284/567 (50%), Gaps = 38/567 (6%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G QLH + G D +T++ L+S YA+F+ V + + + + +I+ +
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV--GSMGWSL 180
+ L EA+ ++M IP S+L C + + + A+ + M S+
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
+ ALV MY KF A H+FD M +++VSW +IS + + LF MQ E
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGK 300
+ N + LLS + + L++ + +V K
Sbjct: 246 NLRPNRV-------------------TLLSVLPACVELNYGSSLV--------------K 272
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
EIHG + R G + + A +TMY RCG++ + +LF+ + + ++ W++M+SG+A
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETG 332
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLW 420
EV L QM EG E N VT+ +++ C L H I+K F ++LL
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC-GFMSHILLG 391
Query: 421 NTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIK 480
N L+DMYA+ G + A+ VF LT +D V++++MI YG+ G G AL IF+ M K +
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHE 451
Query: 481 PDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKE 540
D +A +A+L+AC+H+GLV + Q +F + Y + +EHYAC +L GR G ++ A E
Sbjct: 452 VDDMAFLAILSACNHAGLVEEAQTIFTQ-AGKYHMPVTLEHYACYINLLGRFGKIDDAFE 510
Query: 541 IITRMPYKPTPAMWATLIGACRIHGN-TVLGEWAAGKLLEMKPDHSGYYILIANMYAAAG 599
+ MP KP+ +W++L+ AC HG V G+ A +L++ +PD+ Y+L++ ++ +G
Sbjct: 511 VTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESG 570
Query: 600 CWSELAEVRTYMRNLGVKKAPGCAWVD 626
+ EVR M+ + K G + ++
Sbjct: 571 NYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 155/350 (44%), Gaps = 55/350 (15%)
Query: 54 CINVNSLSP-GKQLHAQVISLGFDQNTIMLPR-LVSFYARFNLFDDACIVTESSSSLEPL 111
C + S S + HA V+ Q +++L LV Y +F+ A V + +
Sbjct: 158 CTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEV 217
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGV-EVHKA 170
W +IS V N+ + + +R M R+ + P+ T SVL AC EL +S V E+H
Sbjct: 218 SWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIH-- 275
Query: 171 IEVGSMGWSLFVHN---------ALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCY 221
G+S F H A ++MY + G + ++R LF+ RD V W+++IS Y
Sbjct: 276 ------GFS-FRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGY 328
Query: 222 ASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHV 281
A G E L +M++EG+E N V
Sbjct: 329 AETGDCSEVMNLLNQMRKEGIEAN----------------------------------SV 354
Query: 282 AMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRM 341
++ ++AC++ L +H ++ GF + NALI MY++CG L A +F +
Sbjct: 355 TLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYEL 414
Query: 342 EEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLC 391
EK L++W++M++ + E +F+ M+ G E + + ++L C
Sbjct: 415 TEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSAC 464
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 1/197 (0%)
Query: 298 LGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFA 357
LG ++H ++ G D V N+LI+MY++ +F M + +++ ++++
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 358 HMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARI-ANLQHGKEFHCYIMKREQFKEY 416
+ E L ++M G P +AS+L LC R+ ++ + + FH ++ E+ +E
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK 476
+LL LVDMY + A VFD + ++EV++TAMI G +M +++F M +
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
Query: 477 FKIKPDHVAMVAVLTAC 493
++P+ V +++VL AC
Sbjct: 245 ENLRPNRVTLLSVLPAC 261
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 227/383 (59%), Gaps = 9/383 (2%)
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
+ +C+ + AL++GK +H HAV +GF + V+ AL+T YS+CGD+ A +F RM EK +
Sbjct: 114 IKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSI 173
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
+ WN+++SGF DE +F QM G EP+ T S+L CA+ + G H Y
Sbjct: 174 VAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQY 233
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM 466
I+ E + L L+++Y+R G V +A+ VFD + + +TAMI YG G GQ
Sbjct: 234 IIS-EGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQ 292
Query: 467 ALNIFEEM---CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA 523
A+ +F +M C P++V VAVL+AC+H+GLV +G+ +++ M Y +IP +EH+
Sbjct: 293 AVELFNKMEDDC--GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV 350
Query: 524 CMADLFGRAGLLNKAKEIITRMPYK---PTPAMWATLIGACRIHGNTVLGEWAAGKLLEM 580
CM D+ GRAG L++A + I ++ PA+W ++GAC++H N LG A +L+ +
Sbjct: 351 CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIAL 410
Query: 581 KPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTS 640
+PD+ G++++++N+YA +G E++ +R M ++K G + ++V + F +GD S
Sbjct: 411 EPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDES 470
Query: 641 NPHAGEIYPLMDGLNELMKDAGY 663
+ GEIY ++ L K+ GY
Sbjct: 471 HQETGEIYRYLETLISRCKEIGY 493
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 200/437 (45%), Gaps = 40/437 (9%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRN 123
+Q+HA +I G+ ++ +L +L++ ++ S + +N +I +
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 124 ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH 183
L + ++ YR+ML V P +T+ SV+K+C +L G VH V G +V
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
ALV+ Y+K G +E AR +FD MPE+ V+WN+++S + G EA ++F +M+E G E
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
D V L+AC+ GA+ LG +H
Sbjct: 206 P----------------------------------DSATFVSLLSACAQTGAVSLGSWVH 231
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
+ + G D+ + ALI +YSRCGD+G A +F +M+E + W AM+S +
Sbjct: 232 QYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQ 291
Query: 364 EVSFLFRQMLHE-GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
+ LF +M + G PN VT +VL CA ++ G+ + + K + +
Sbjct: 292 QAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVC 351
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEVT----YTAMIRGYGMKGEGQMALNIFEEMCKFK 478
+VDM R+G + EA + L + T +TAM+ M + + I + + +
Sbjct: 352 MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALE 411
Query: 479 I-KPDHVAMVAVLTACS 494
P H M++ + A S
Sbjct: 412 PDNPGHHVMLSNIYALS 428
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 164/358 (45%), Gaps = 44/358 (12%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C ++++L GK +H + GF +T + LV+FY++ + A V + + W
Sbjct: 117 CADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAW 176
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N L+S F +N L EA+ + +M PD T+ S+L AC + + G VH+ I
Sbjct: 177 NSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIIS 236
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ ++ + AL+++Y++ G + AR +FD M E + +W +IS Y + G +A +L
Sbjct: 237 EGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVEL 296
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI 293
F +M+++ G + ++V V L+AC+H
Sbjct: 297 FNKMEDDC----------------------GPIP-----------NNVTFVAVLSACAHA 323
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRN--ALITMYSRCGDLGHAYMLFQRMEEKGLIT--- 348
G ++ G+ ++ ++ + ++ V + ++ M R G L AY +++ G T
Sbjct: 324 GLVEEGRSVYKRMTKS-YRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPA 382
Query: 349 -WNAMLSGFAHMDRVDE--VSFLFRQMLHEGAEP-NYVTIASVLPLCARIANLQHGKE 402
W AML G M R + V R + E P ++V ++++ L + + H ++
Sbjct: 383 LWTAML-GACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRD 439
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSG 355
+K +++H H + TG+ ++ LIT+ + + ++LF + +N+++
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKE 415
+ + +R+ML P+ T SV+ CA ++ L+ GK HC+ + F
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVV-SGFGL 140
Query: 416 YLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
+ LV Y++ G + A++VFD + + V + +++ G+ G A+ +F +M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 476 KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLL 535
+ +PD V++L+AC+ +G V+ G + Q ++ + G+ ++ + +L+ R G +
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKLGTALINLYSRCGDV 259
Query: 536 NKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPD 583
KA+E+ +M + A W +I A HG G+ A +M+ D
Sbjct: 260 GKAREVFDKMK-ETNVAAWTAMISAYGTHG---YGQQAVELFNKMEDD 303
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/447 (31%), Positives = 228/447 (51%), Gaps = 37/447 (8%)
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
N+ ++ M G++ +G + L +M S+ D+ + L AC LK+ +EIH
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIH 146
Query: 304 GHAVRTGFDVLDNV-------------------------------RNALITMYSRCGDLG 332
++ GF +V +I YS CG +
Sbjct: 147 AQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIK 206
Query: 333 HAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA 392
A LFQ ++ K + W AM+ G +++ LFR+M E N T VL C+
Sbjct: 207 EALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACS 266
Query: 393 RIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYT 452
+ L+ G+ H ++ + ++ + + N L++MY+R G + EA+RVF + +D ++Y
Sbjct: 267 DLGALELGRWVHSFV-ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYN 325
Query: 453 AMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDD 512
MI G M G A+N F +M +P+ V +VA+L ACSH GL+ G +F M
Sbjct: 326 TMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRV 385
Query: 513 YGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEW 572
+ + P+IEHY C+ DL GR G L +A I +P +P M TL+ AC+IHGN LGE
Sbjct: 386 FNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEK 445
Query: 573 AAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFS 632
A +L E + SG Y+L++N+YA++G W E E+R MR+ G++K PGC+ ++V +
Sbjct: 446 IAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIH 505
Query: 633 PFFVGDTSNPHAGEIYPLMDGLNELMK 659
F VGD ++PH IY + LN +++
Sbjct: 506 EFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 226/481 (46%), Gaps = 45/481 (9%)
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNEL 125
+HA++I DQ+ ++ L+ + + D A V S+ + +I FV +
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 126 FVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNA 185
+ +S Y +M+ V+PD + SVLKAC D E+H + G S V
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLK 163
Query: 186 LVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
++ +Y K G+L A+ +FD MP+RD V+ +I+CY+ G EA +LF+ ++ + +
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIK----D 219
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLGKEIHG 304
+ W M G + AL+L +M+ ++ + V L+ACS +GAL+LG+ +H
Sbjct: 220 TVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHS 279
Query: 305 HAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDE 364
++ + V NALI MYSRCGD+ A +F+ M +K +I++N M+SG A E
Sbjct: 280 FVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVE 339
Query: 365 VSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLV 424
FR M++ G PN VT+ ++L C+ L G E + + + + + +V
Sbjct: 340 AINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIV 399
Query: 425 DMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHV 484
D+ R G++ EA R +++ I+PDH+
Sbjct: 400 DLLGRVGRLEEAYRFIENIP----------------------------------IEPDHI 425
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
+ +L+AC G + G+ + + + + P Y +++L+ +G ++ EI
Sbjct: 426 MLGTLLSACKIHGNMELGEKIAKRLFESEN--PDSGTYVLLSNLYASSGKWKESTEIRES 483
Query: 545 M 545
M
Sbjct: 484 M 484
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 163/415 (39%), Gaps = 108/415 (26%)
Query: 64 KQLHAQVISLGF-------------------------------DQNTIMLPRLVSFYARF 92
+++HAQV+ LGF D++ + +++ Y+
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 93 NLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVL 152
+A + + + + W +I VRN+ +AL +R+M + V +EFT VL
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 153 KACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDV 212
AC +L G VH +E M S FV NAL++MY++ G + AR +F M ++D +
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 322
Query: 213 SWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM 272
S+NT+IS A G EA F M G N
Sbjct: 323 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPN--------------------------- 355
Query: 273 RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRN--ALITMYSRCGD 330
V +V LNACSH G L +G E+ R F+V + + ++ + R G
Sbjct: 356 -------QVTLVALLNACSHGGLLDIGLEVFNSMKRV-FNVEPQIEHYGCIVDLLGRVGR 407
Query: 331 LGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPL 390
L AY + + EP+++ + ++L
Sbjct: 408 LEEAYRFIENIP----------------------------------IEPDHIMLGTLLSA 433
Query: 391 CARIANLQHGKEFHCYIMKREQFKE--YLLLWNTLVDMYARSGKVLEAKRVFDSL 443
C N++ G++ + + E Y+LL N +YA SGK E+ + +S+
Sbjct: 434 CKIHGNMELGEKIAKRLFESENPDSGTYVLLSN----LYASSGKWKESTEIRESM 484
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C ++ +L G+ +H+ V + + + + L++ Y+R ++A V + +
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVIS 323
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC--GELLDCASGVEVHKA 170
+N +IS + VEA++ +R M+ + P++ T ++L AC G LLD G+EV +
Sbjct: 324 YNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDI--GLEVFNS 381
Query: 171 IE-VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP-ERDDVSWNTIISC-------- 220
++ V ++ + + +V + + G+LE A +N+P E D + T++S
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 221 --------------------------YASRGTWGEAFKLFERMQEEGVE 243
YAS G W E+ ++ E M++ G+E
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 232/436 (53%), Gaps = 34/436 (7%)
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHL-DHVAMVVGLNACSHIGALKLGKEI 302
N+ ++N++ Y H + +++ Q+ R S L D +C+ +G+ LGK++
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
HGH + G NALI MY + DL A+ +F M E+ +I+WN++LSG+A + ++
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQM 191
Query: 363 DEVSFLF-------------------------------RQMLHEGAEPNYVTIASVLPLC 391
+ LF R+M G EP+ +++ SVLP C
Sbjct: 192 KKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSC 251
Query: 392 ARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTY 451
A++ +L+ GK H Y +R K+ + N L++MY++ G + +A ++F + +D +++
Sbjct: 252 AQLGSLELGKWIHLYAERRGFLKQTGVC-NALIEMYSKCGVISQAIQLFGQMEGKDVISW 310
Query: 452 TAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVD 511
+ MI GY G A+ F EM + K+KP+ + + +L+ACSH G+ +G F M
Sbjct: 311 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Query: 512 DYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGE 571
DY I P+IEHY C+ D+ RAG L +A EI MP KP +W +L+ +CR GN +
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Query: 572 WAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEF 631
A L+E++P+ G Y+L+AN+YA G W +++ +R +RN +KK PG + ++V
Sbjct: 431 VAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIV 490
Query: 632 SPFFVGDTSNPHAGEI 647
F GD S P EI
Sbjct: 491 QEFVSGDNSKPFWTEI 506
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 146/525 (27%), Positives = 251/525 (47%), Gaps = 54/525 (10%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNML 116
V S + K+++A +I G Q++ M+ ++V F + D A + S+ +N +
Sbjct: 20 VKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSI 79
Query: 117 ISMFVRNELFVEALSAYRKMLRKQV-IPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
I + N L+ + + Y+++LRK +PD FT+P + K+C L C G +VH +
Sbjct: 80 IRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG 139
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ + NAL+ MY KF L A +FD M ERD +SWN+++S YA G +A LF
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIG 294
M ++ I+ W M GY G + A+ +M+ + I D ++++ L +C+ +G
Sbjct: 200 LM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLG 255
Query: 295 ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLS 354
+L+LGK IH +A R GF V NALI MYS+CG + A LF +ME K +I+W+ M+S
Sbjct: 256 SLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMIS 315
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
G+A+ F +M +PN +T +L C+ + Q G + + + Q +
Sbjct: 316 GYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIE 375
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
+ + L+D+ AR+GK L R E+T T
Sbjct: 376 PKIEHYGCLIDVLARAGK----------LERAVEITKT---------------------- 403
Query: 475 CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPR-IEHYACMADLFGRAG 533
+KPD ++L++C G + V +V+ + P + +Y +A+++ G
Sbjct: 404 --MPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE---LEPEDMGNYVLLANIYADLG 458
Query: 534 L---LNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAG 575
+++ +++I K TP G I N ++ E+ +G
Sbjct: 459 KWEDVSRLRKMIRNENMKKTP-------GGSLIEVNNIVQEFVSG 496
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 226/421 (53%), Gaps = 7/421 (1%)
Query: 250 NTMAGGYLHAGNFKGALKLLSQMR--TSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAV 307
NTM + + +L +R +S+ + ++ L C G L G +IHG
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 308 RTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSF 367
GF + L+ +YS C + A +F + ++ ++WN + S + R +V
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 368 LFRQMLHE---GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLV 424
LF +M ++ +P+ VT L CA + L GK+ H +I L L NTLV
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI-DENGLSGALNLSNTLV 259
Query: 425 DMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHV 484
MY+R G + +A +VF + R+ V++TA+I G M G G+ A+ F EM KF I P+
Sbjct: 260 SMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVD-DYGIIPRIEHYACMADLFGRAGLLNKAKEIIT 543
+ +L+ACSHSGLVA+G + F M ++ I P + HY C+ DL GRA LL+KA +I
Sbjct: 320 TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIK 379
Query: 544 RMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSE 603
M KP +W TL+GACR+HG+ LGE L+E+K + +G Y+L+ N Y+ G W +
Sbjct: 380 SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEK 439
Query: 604 LAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
+ E+R+ M+ + PGC+ +++ G F V D S+P EIY ++ +N+ +K AGY
Sbjct: 440 VTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGY 499
Query: 664 I 664
+
Sbjct: 500 V 500
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 192/460 (41%), Gaps = 53/460 (11%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDD---ACIVTESSSSLEPL--HWNMLIS 118
+Q+HA ++ +N+ + +S A + D +C V S L P H N +I
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVF--SQRLNPTLSHCNTMIR 85
Query: 119 MFVRNELFVEALSAYRKMLRKQVIP-DEFTYPSVLKACGELLDCASGVEVH-KAIEVGSM 176
F ++ E +R + R +P + + LK C + D G+++H K G +
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFL 145
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
SL + L+ +Y+ A +FD +P+RD VS
Sbjct: 146 SDSLLM-TTLMDLYSTCENSTDACKVFDEIPKRDTVS----------------------- 181
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSI----HLDHVAMVVGLNACSH 292
WN + YL + L L +M+ + D V ++ L AC++
Sbjct: 182 ------------WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACAN 229
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+GAL GK++H G N+ N L++MYSRCG + AY +F M E+ +++W A+
Sbjct: 230 LGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTAL 289
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE- 411
+SG A E F +ML G P T+ +L C+ + G F + E
Sbjct: 290 ISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEF 349
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR-DEVTYTAMIRGYGMKGEGQMALNI 470
+ K L + +VD+ R+ + +A + S+ + D + ++ + G+ ++ +
Sbjct: 350 KIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERV 409
Query: 471 FEEMCKFKIKP--DHVAMVAVLTACSHSGLVAQGQVLFQE 508
+ + K + D+V ++ + V + + L +E
Sbjct: 410 ISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKE 449
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 8/242 (3%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
CI L G Q+H ++ S GF +++++ L+ Y+ DAC V + + + W
Sbjct: 123 CIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSW 182
Query: 114 NMLISMFVRNELFVEALSAYRKM---LRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
N+L S ++RN+ + L + KM + V PD T L+AC L G +VH
Sbjct: 183 NVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDF 242
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
I+ + +L + N LVSMY++ G ++ A +F M ER+ VSW +IS A G EA
Sbjct: 243 IDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEA 302
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-----SIHLDHVAMVV 285
+ F M + G+ + H+G + +MR+ +L H VV
Sbjct: 303 IEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVV 362
Query: 286 GL 287
L
Sbjct: 363 DL 364
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 196/648 (30%), Positives = 303/648 (46%), Gaps = 87/648 (13%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARF---NLFDDACIVTESSSSLEPLH 112
N NS + KQ+ AQ++ +T + RL+ F A NL + + +
Sbjct: 43 NCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFV 102
Query: 113 WNMLISMFV--RNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
+N +IS +NE F Y M+R +V PD T+ ++KA L + ++H
Sbjct: 103 YNTMISAVSSSKNECF----GLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK---QIHCH 155
Query: 171 IEV-GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGE 229
I V G + ++ N+LV Y + G VA +F MP D S+N +I YA +G E
Sbjct: 156 IIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLE 215
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNA 289
A KL+ +M +G I D ++ L
Sbjct: 216 ALKLYFKMVSDG----------------------------------IEPDEYTVLSLLVC 241
Query: 290 CSHIGALKLGKEIHGHAVRTGFDVLDNV--RNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
C H+ ++LGK +HG R G N+ NAL+ MY +C + G A F M++K +
Sbjct: 242 CGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMR 301
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQM---------------------------------LH 374
+WN M+ GF + ++ +F QM +
Sbjct: 302 SWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIV 361
Query: 375 EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVL 434
E +P+ VT+ S++ A L HG+ H ++ R Q K L + L+DMY + G +
Sbjct: 362 EKVKPDRVTMVSLISGAANNGELSHGRWVHGLVI-RLQLKGDAFLSSALIDMYCKCGIIE 420
Query: 435 EAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
A VF + T +D +T+MI G G GQ AL +F M + + P++V ++AVLTACS
Sbjct: 421 RAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS 480
Query: 495 HSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEII-TRMPYKPTPAM 553
HSGLV +G +F M D +G P EHY + DL RAG + +AK+I+ +MP +P+ +M
Sbjct: 481 HSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSM 540
Query: 554 WATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRN 613
W +++ ACR + E A +LL+++P+ G Y+L++N+YA G W + R M N
Sbjct: 541 WGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMEN 600
Query: 614 LGVKKAPGCAWVDVGGEFSPFFVG--DTSNPHAGEIYPLMDGLNELMK 659
GVKK G + V VG E FV ++P EI ++ L MK
Sbjct: 601 RGVKKTAGYSSV-VGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 174/595 (29%), Positives = 276/595 (46%), Gaps = 115/595 (19%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLV---------SFYARFNLFDDA------ 98
C N+ +L KQ+HA ++ G N ++ L+ + LFD+
Sbjct: 22 CKNIRTL---KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVS 78
Query: 99 -C--IVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC 155
C ++ S+ S++P + +S Y +M ++ V PD +T+ VLKAC
Sbjct: 79 ICNHVLRGSAQSMKP----------------EKTVSLYTEMEKRGVSPDRYTFTFVLKAC 122
Query: 156 GELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWN 215
+L ++G H + + +V NAL+ +A G L +A LFD+ + V+
Sbjct: 123 SKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVA-- 180
Query: 216 TIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS 275
W++M GY G A++L +M
Sbjct: 181 ---------------------------------WSSMTSGYAKRGKIDEAMRLFDEMP-- 205
Query: 276 IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAY 335
+ D VA N +IT +C ++ A
Sbjct: 206 -YKDQVAW-----------------------------------NVMITGCLKCKEMDSAR 229
Query: 336 MLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIA 395
LF R EK ++TWNAM+SG+ + E +F++M G P+ VTI S+L CA +
Sbjct: 230 ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 396 NLQHGKEFHCYIMKREQFKEYLL----LWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTY 451
+L+ GK H YI++ + +WN L+DMYA+ G + A VF + RD T+
Sbjct: 290 DLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTW 349
Query: 452 TAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVD 511
+I G + + ++ +FEEM + K+ P+ V + V+ ACSHSG V +G+ F M D
Sbjct: 350 NTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRD 408
Query: 512 DYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGE 571
Y I P I+HY CM D+ GRAG L +A + M +P +W TL+GAC+I+GN LG+
Sbjct: 409 MYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGK 468
Query: 572 WAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVD 626
+A KLL M+ D SG Y+L++N+YA+ G W + +VR + VKK G + ++
Sbjct: 469 YANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 219/409 (53%), Gaps = 3/409 (0%)
Query: 255 GYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVL 314
G G K A+ LL + + ++ V L C GK IH GF +
Sbjct: 85 GLCVTGRLKEAVGLL--WSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALN 142
Query: 315 DNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLH 374
+ ++ L+ +Y+ GDL A +LF+ ++ + LI WNAM+SG+ E F++ M
Sbjct: 143 EYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ 202
Query: 375 EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVL 434
P+ T ASV C+ + L+HGK H ++KR K +++ + LVDMY +
Sbjct: 203 NRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFS 261
Query: 435 EAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
+ RVFD L+ R+ +T+T++I GYG G+ L FE+M + +P+ V + VLTAC+
Sbjct: 262 DGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACN 321
Query: 495 HSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMW 554
H GLV +G F M DYGI P +HYA M D GRAG L +A E + + P K P +W
Sbjct: 322 HGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVW 381
Query: 555 ATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNL 614
+L+GACRIHGN L E AA K LE+ P + G Y++ AN YA+ G ++VR M N
Sbjct: 382 GSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENA 441
Query: 615 GVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
GVKK PG + +++ GE F DTS+ + +IY + + D Y
Sbjct: 442 GVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDY 490
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + GK++HAQ+ +GF N + +L+ YA A I+ S + + W
Sbjct: 118 CKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPW 177
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +IS +V+ L E L Y M + +++PD++T+ SV +AC L G H +
Sbjct: 178 NAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIK 237
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ ++ V +ALV MY K +FD + R+ ++W ++IS Y G E K
Sbjct: 238 RCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKC 297
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAG 260
FE+M+EEG N + + + H G
Sbjct: 298 FEKMKEEGCRPNPVTFLVVLTACNHGG 324
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 38/298 (12%)
Query: 140 QVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVA 199
QV P+ TY +L+ C + + G +H + V + ++ L+ +YA G L+ A
Sbjct: 105 QVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 200 RHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHA 259
LF ++ RD + WN +IS Y +G E ++ M++ N I+ + Y A
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ-----NRIVPDQ----YTFA 213
Query: 260 GNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRN 319
F+ ACS + L+ GK H ++ V +
Sbjct: 214 SVFR-------------------------ACSALDRLEHGKRAHAVMIKRCIKSNIIVDS 248
Query: 320 ALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEP 379
AL+ MY +C + +F ++ + +ITW +++SG+ + +V EV F +M EG P
Sbjct: 249 ALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRP 308
Query: 380 NYVTIASVLPLCARIANLQHGKEFHCYIMKREQ-FKEYLLLWNTLVDMYARSGKVLEA 436
N VT VL C + G E H Y MKR+ + + +VD R+G++ EA
Sbjct: 309 NPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 250/499 (50%), Gaps = 47/499 (9%)
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTII-SCYASRGTWGEAFKLFERM 237
+LF++ ++ + + F + A +FD++ WNT+I +C EAF L+ +M
Sbjct: 82 TLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKM 141
Query: 238 QEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALK 297
E G D L AC++I
Sbjct: 142 LERGESSP---------------------------------DKHTFPFVLKACAYIFGFS 168
Query: 298 LGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFA 357
GK++H V+ GF V N LI +Y CG L A +F M E+ L++WN+M+
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 358 HMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYL 417
D LFR+M EP+ T+ SVL CA + +L G H +++++ +
Sbjct: 229 RFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 418 --LLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
L+ N+L++MY + G + A++VF + +RD ++ AMI G+ G + A+N F+ M
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 476 KFK--IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAG 533
+ ++P+ V V +L AC+H G V +G+ F MV DY I P +EHY C+ DL RAG
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 534 LLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTV-LGEWAAGKLLEMKPDH-------S 585
+ +A +++ MP KP +W +L+ AC G +V L E A ++ K D+ S
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCS 467
Query: 586 GYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAG 645
G Y+L++ +YA+A W+++ VR M G++K PGC+ +++ G FF GDTS+P
Sbjct: 468 GAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTK 527
Query: 646 EIYPLMDGLNELMKDAGYI 664
+IY + +++ ++ GY+
Sbjct: 528 QIYQQLKVIDDRLRSIGYL 546
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 194/421 (46%), Gaps = 56/421 (13%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIML---PRLVSFYARFNLFDDACIVTESSSSLEPLHWN 114
+ +S KQLHA + + + L +++ + F+ + A V +S + WN
Sbjct: 59 SDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWN 118
Query: 115 MLISMFV----RNELFVEALSAYRKML-RKQVIPDEFTYPSVLKACGELLDCASGVEVHK 169
LI R E EA YRKML R + PD+ T+P VLKAC + + G +VH
Sbjct: 119 TLIRACAHDVSRKE---EAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHC 175
Query: 170 AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGE 229
I G ++V+N L+ +Y G L++AR +FD MPER VSWN++I G +
Sbjct: 176 QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS 235
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNA 289
A +LF MQ S D M L+A
Sbjct: 236 ALQLFREMQR-----------------------------------SFEPDGYTMQSVLSA 260
Query: 290 CSHIGALKLGKEIHGHAVR-----TGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK 344
C+ +G+L LG H +R DVL V+N+LI MY +CG L A +FQ M+++
Sbjct: 261 CAGLGSLSLGTWAHAFLLRKCDVDVAMDVL--VKNSLIEMYCKCGSLRMAEQVFQGMQKR 318
Query: 345 GLITWNAMLSGFAHMDRVDEVSFLFRQML--HEGAEPNYVTIASVLPLCARIANLQHGKE 402
L +WNAM+ GFA R +E F +M+ E PN VT +L C + G++
Sbjct: 319 DLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 378
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMK 461
+ +++ + L + +VD+ AR+G + EA + S+ + D V + +++ K
Sbjct: 379 YFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKK 438
Query: 462 G 462
G
Sbjct: 439 G 439
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + S GKQ+H Q++ GF + + L+ Y D A V + +
Sbjct: 160 ACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVS 219
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH---- 168
WN +I VR + AL +R+M R PD +T SVL AC L + G H
Sbjct: 220 WNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLL 278
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+ +V + + V N+L+ MY K G L +A +F M +RD SWN +I +A+ G
Sbjct: 279 RKCDV-DVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAE 337
Query: 229 EAFKLFERM--QEEGVEMNIIIWNTMAGGYLHAGNFKG 264
EA F+RM + E V N + + G L A N +G
Sbjct: 338 EAMNFFDRMVDKRENVRPNSVTF----VGLLIACNHRG 371
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/599 (28%), Positives = 280/599 (46%), Gaps = 77/599 (12%)
Query: 68 AQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFV 127
A +I +Q+ ++ + ++ F D A +N L FV +
Sbjct: 794 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 853
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALV 187
+L Y +MLR V P +TY S++KA ++ H + G+ V
Sbjct: 854 RSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH----IWKFGFGFHV----- 904
Query: 188 SMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNII 247
K++ T+I Y++ G EA K+F+ M E + I
Sbjct: 905 -------KIQT-----------------TLIDFYSATGRIREARKVFDEMPER----DDI 936
Query: 248 IWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAV 307
W TM Y + A L +QM
Sbjct: 937 AWTTMVSAYRRVLDMDSANSLANQMS---------------------------------- 962
Query: 308 RTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSF 367
+ + N LI Y G+L A LF +M K +I+W M+ G++ R E
Sbjct: 963 ----EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIA 1018
Query: 368 LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMY 427
+F +M+ EG P+ VT+++V+ CA + L+ GKE H Y ++ F + + + LVDMY
Sbjct: 1019 VFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN-GFVLDVYIGSALVDMY 1077
Query: 428 ARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMV 487
++ G + A VF +L +++ + ++I G G Q AL +F +M +KP+ V V
Sbjct: 1078 SKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFV 1137
Query: 488 AVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY 547
+V TAC+H+GLV +G+ +++ M+DDY I+ +EHY M LF +AGL+ +A E+I M +
Sbjct: 1138 SVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEF 1197
Query: 548 KPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEV 607
+P +W L+ CRIH N V+ E A KL+ ++P +SGYY L+ +MYA W ++AE+
Sbjct: 1198 EPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEI 1257
Query: 608 RTYMRNLGVKK-APGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYIR 665
R MR LG++K PG + + + F D S+ + E+ L+D + + M AGY++
Sbjct: 1258 RGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 1316
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/577 (28%), Positives = 291/577 (50%), Gaps = 28/577 (4%)
Query: 60 LSPGKQLHAQVISLGFDQ-NTIMLPRLVSFYARF--NLFDDACIVTESSSSLEPLHWNML 116
L KQ+HAQ++ ++ I++ + + F F N+ + + + + W L
Sbjct: 16 LEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCL 75
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGS 175
+ ++ F E + Y M + P SVL+ACG++ + G +H +A++ G
Sbjct: 76 VRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGL 135
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
G ++V LV +Y++ G +E+A+ FD++ E++ VSWN+++ Y G EA ++F+
Sbjct: 136 CG-CVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFD 194
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGA 295
++ E+ + + WN + Y G+ A L S M ++ G C
Sbjct: 195 KIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCRE--- 247
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRN----ALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
+KL RT FD + +I+ Y++ GD+ A LF+ M +K + ++A
Sbjct: 248 MKLA--------RTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDA 299
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGA--EPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
M++ + + + LF QML + +P+ +T++SV+ +++ N G YI +
Sbjct: 300 MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE 359
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
K LL +L+D+Y + G +A ++F +L ++D V+Y+AMI G G+ G A +
Sbjct: 360 H-GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANS 418
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
+F M + KI P+ V +L+A SHSGLV +G F M D+ + P +HY M D+
Sbjct: 419 LFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDML 477
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
GRAG L +A E+I MP +P +W L+ A +H N GE A ++++ D +GY
Sbjct: 478 GRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLS 537
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVD 626
+A +Y++ G W + VR ++ + K GC+WV+
Sbjct: 538 HLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 180/396 (45%), Gaps = 20/396 (5%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + ++ GK +HAQ + G + LV Y+R + A + + +
Sbjct: 113 ACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVS 172
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN L+ ++ + EA + K+ K D ++ ++ + + D + + A+
Sbjct: 173 WNSLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMP 228
Query: 173 VGS-MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ S W N L+ Y ++++AR FD MP+++ VSW T+IS Y G A
Sbjct: 229 LKSPASW-----NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAE 283
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM--RTS-IHLDHVAMVVGLN 288
+LF M ++ + ++++ M Y G K ALKL +QM R S I D + + ++
Sbjct: 284 ELFRLMSKK----DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVS 339
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
A S +G G + + G + D + +LI +Y + GD A+ +F + +K ++
Sbjct: 340 ANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS 399
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY-I 407
++AM+ G E + LF M+ + PN VT +L + +Q G + C+
Sbjct: 400 YSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEG--YKCFNS 457
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
MK + + +VDM R+G++ EA + S+
Sbjct: 458 MKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSM 493
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 254/479 (53%), Gaps = 7/479 (1%)
Query: 187 VSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
+SMY+K G A ++ M +++ +S N +I+ Y G A K+F+ M + +
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDR----KL 56
Query: 247 IIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLGKEIHGH 305
WN M G + + L L +M D + + + + ++ +G++IHG+
Sbjct: 57 TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 116
Query: 306 AVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEV 365
++ G ++ V ++L MY R G L ++ + M + L+ WN ++ G A + V
Sbjct: 117 TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETV 176
Query: 366 SFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVD 425
+L++ M G PN +T +VL C+ +A G++ H +K ++ ++L+
Sbjct: 177 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV-SSLIS 235
Query: 426 MYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC-KFKIKPDHV 484
MY++ G + +A + F DEV +++MI YG G+G A+ +F M + ++ + V
Sbjct: 236 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 295
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
A + +L ACSHSGL +G LF MV+ YG P ++HY C+ DL GRAG L++A+ II
Sbjct: 296 AFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRS 355
Query: 545 MPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSEL 604
MP K +W TL+ AC IH N + + ++L++ P+ S Y+L+AN++A+A W ++
Sbjct: 356 MPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDV 415
Query: 605 AEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
+EVR MR+ VKK G +W + GE F +GD S + EIY + L MK GY
Sbjct: 416 SEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGY 474
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 182/408 (44%), Gaps = 38/408 (9%)
Query: 85 LVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPD 144
L++ Y R +A V + + WN +I+ ++ E E LS +R+M PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 145 EFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFD 204
E+T SV L + G ++H + L V+++L MY + GKL+ +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 205 NMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKG 264
+MP R+ V+WNT+I A G L++ M+ G N I + T+
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTV------------ 198
Query: 265 ALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITM 324
L++CS + G++IH A++ G + V ++LI+M
Sbjct: 199 ----------------------LSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM 236
Query: 325 YSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHE-GAEPNYVT 383
YS+CG LG A F E++ + W++M+S + + DE LF M + E N V
Sbjct: 237 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 296
Query: 384 IASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
++L C+ G E ++++ FK L + +VD+ R+G + +A+ + S+
Sbjct: 297 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 356
Query: 444 -TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVL 490
+ D V + ++ + +MA +F+E+ +I P+ A +L
Sbjct: 357 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI--LQIDPNDSACYVLL 402
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 146/342 (42%), Gaps = 43/342 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
G + S+S G+Q+H I G + + ++ L Y R D IV S +
Sbjct: 100 GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVA 159
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAI 171
WN LI +N L Y+ M P++ T+ +VL +C +L G ++H +AI
Sbjct: 160 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 219
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
++G+ + V ++L+SMY+K G L A F + D+V W+++IS Y G EA
Sbjct: 220 KIGASS-VVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAI 278
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
+LF M E+ T++ ++ VA + L ACS
Sbjct: 279 ELFNTMAEQ---------------------------------TNMEINEVAFLNLLYACS 305
Query: 292 HIGALKLGKEIHGHAV-RTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK-GLITW 349
H G G E+ V + GF ++ + R G L A + + M K ++ W
Sbjct: 306 HSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIW 365
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN----YVTIASV 387
+LS + +F+++L +PN YV +A+V
Sbjct: 366 KTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSACYVLLANV 405
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 166/600 (27%), Positives = 294/600 (49%), Gaps = 39/600 (6%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G L++Q+I LG+ N ++ ++ Y+ + A + + ++ + + WN +I ++
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLK 277
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
N+ + L +R ML V P +FTY VL C +L + G +H I V L +
Sbjct: 278 NDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPL 337
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
NAL+ MY G + A ++F + + VSWN+IIS + G +A ++ R+
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLR--- 394
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
M+ F A+ ++ +H GK +
Sbjct: 395 ---------MSTPRPDEYTFSAAISATAEPERFVH---------------------GKLL 424
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
HG + G++ V L++MY + + A +F M+E+ ++ W M+ G + +
Sbjct: 425 HGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNS 484
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
+ F +M E + +++SV+ C+ +A L+ G+ FHC + R F + +
Sbjct: 485 ELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAI-RTGFDCVMSVCGA 543
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
LVDMY ++GK A+ +F + D + +M+ Y G + AL+ FE++ + PD
Sbjct: 544 LVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPD 603
Query: 483 HVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEII 542
V +++L ACSH G QG+ L+ +M + GI +HY+CM +L +AGL+++A E+I
Sbjct: 604 AVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELI 662
Query: 543 TRMPYKPTPA-MWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCW 601
+ P A +W TL+ AC N +G +AA ++L++ P+ + +IL++N+YA G W
Sbjct: 663 EQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRW 722
Query: 602 SELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFF-VGDTSNPHAGEIYPLMDGLNELMKD 660
++AE+R +R L K PG +W++V + F GD SNP + D LN L ++
Sbjct: 723 EDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEV--VSQAQDELNRLKRN 780
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 244/548 (44%), Gaps = 48/548 (8%)
Query: 54 CINVNSLSPGKQLHAQVISLGF---DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEP 110
C+++ L +Q+HA V++ G ++ L+S Y R + A V +
Sbjct: 104 CVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNV 163
Query: 111 LHWNMLISMFVRNELFVE-ALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK 169
+ +N L S + RN F A M + V P+ T+ S+++ C L D G ++
Sbjct: 164 VSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNS 223
Query: 170 AIEVGSMGWS--LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW 227
++ +G+S + V +++ MY+ G LE AR +FD + RD V+WNT+I
Sbjct: 224 --QIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKI 281
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGL 287
+ F M GV+ ++ + L
Sbjct: 282 EDGLMFFRNMLMSGVDPTQFTYS----------------------------------IVL 307
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
N CS +G+ LGK IH + + + NAL+ MY CGD+ A+ +F R+ L+
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLV 367
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLH-EGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
+WN+++SG + ++ ++R++L P+ T ++ + A HGK H
Sbjct: 368 SWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQ 427
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM 466
+ K ++ + + TL+ MY ++ + A++VFD + RD V +T MI G+ G ++
Sbjct: 428 VTKL-GYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSEL 486
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
A+ F EM + K + D ++ +V+ ACS ++ QG+V F + G + +
Sbjct: 487 AVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEV-FHCLAIRTGFDCVMSVCGALV 545
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLE--MKPDH 584
D++G+ G A E I + P W +++GA HG ++LE PD
Sbjct: 546 DMYGKNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDA 604
Query: 585 SGYYILIA 592
Y L+A
Sbjct: 605 VTYLSLLA 612
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 168/386 (43%), Gaps = 38/386 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC + S S GK +HA++I + + L+ Y +A V + +
Sbjct: 309 GCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVS 368
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN +IS N +A+ YR++LR PDE+T+ + + A E G +H +
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
S+FV L+SMY K + E A+ +FD M ERD
Sbjct: 429 TKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERD--------------------- 467
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNAC 290
+++W M G+ GN + A++ +M R D ++ + AC
Sbjct: 468 --------------VVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
S + L+ G+ H A+RTGFD + +V AL+ MY + G A +F L WN
Sbjct: 514 SDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWN 573
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
+ML ++ V++ F Q+L G P+ VT S+L C+ + GK F MK
Sbjct: 574 SMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGK-FLWNQMKE 632
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEA 436
+ K ++ +V++ +++G V EA
Sbjct: 633 QGIKAGFKHYSCMVNLVSKAGLVDEA 658
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 187/430 (43%), Gaps = 51/430 (11%)
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
+ +N L+SMY + LE AR +FD MP+R+ V+ + + + E
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVF------------------E 64
Query: 241 GVEMNIIIWNTMAGGYLHAGNFK-GALKLLSQMRTSIHLDHVAM-VVGLN-ACSHIGALK 297
V M G LH+ K G+ +++ M L+ +A VV L C I LK
Sbjct: 65 YVSM---------GSSLHSQIIKLGSFQMIFFM----PLNEIASSVVELTRKCVSITVLK 111
Query: 298 LGKEIHGHAVRTGFDVLDN---VRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLS 354
++IH + G N LI+MY RCG L A +F +M + ++++NA+ S
Sbjct: 112 RARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYS 171
Query: 355 GFAHMDRVDEVSF-LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
++ +F L M E +PN T S++ +CA + ++ G + I+K +
Sbjct: 172 AYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKL-GY 230
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEE 473
+ +++ +++ MY+ G + A+R+FD + RD V + MI G + + L F
Sbjct: 231 SDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRN 290
Query: 474 MCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV--DDYGIIPRIEHYACMADLFGR 531
M + P VL CS G + G+++ ++ D +P + D++
Sbjct: 291 MLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN---ALLDMYCS 347
Query: 532 AGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAA---GKLLEMKPDHSGYY 588
G + +A + R+ + P W ++I C +G GE A +LL M Y
Sbjct: 348 CGDMREAFYVFGRI-HNPNLVSWNSIISGCSENG---FGEQAMLMYRRLLRMSTPRPDEY 403
Query: 589 ILIANMYAAA 598
A + A A
Sbjct: 404 TFSAAISATA 413
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 211/391 (53%), Gaps = 34/391 (8%)
Query: 298 LGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFA 357
G++IHG V GFD +V LI MY CG LG A +F M K + WNA+L+G+
Sbjct: 134 FGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYG 193
Query: 358 HMDRVDEVSFL---------------------------------FRQMLHEGAEPNYVTI 384
+ +DE L F++ML E EP+ VT+
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 385 ASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT 444
+VL CA + +L+ G+ Y+ R + L N ++DMYA+SG + +A VF+ +
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHR-GMNRAVSLNNAVIDMYAKSGNITKALDVFECVN 312
Query: 445 RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQV 504
R+ VT+T +I G G G AL +F M K ++P+ V +A+L+ACSH G V G+
Sbjct: 313 ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKR 372
Query: 505 LFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIH 564
LF M YGI P IEHY CM DL GRAG L +A E+I MP+K A+W +L+ A +H
Sbjct: 373 LFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH 432
Query: 565 GNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAW 624
+ LGE A +L++++P++SG Y+L+AN+Y+ G W E +R M+ +GVKK G +
Sbjct: 433 HDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESS 492
Query: 625 VDVGGEFSPFFVGDTSNPHAGEIYPLMDGLN 655
++V F GD ++P I+ ++ ++
Sbjct: 493 IEVENRVYKFISGDLTHPQVERIHEILQEMD 523
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 188/393 (47%), Gaps = 6/393 (1%)
Query: 55 INVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDA-CIVTESSSSLEPLHW 113
I+ N+L KQ H +I G +++ + + + + + A + T LH
Sbjct: 23 IHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHN 82
Query: 114 NMLISMFVRNELFVE--ALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
M+ ++ + +E A++ YRK+ PD FT+P VLK + D G ++H +
Sbjct: 83 TMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQV 142
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
V S+ V L+ MY G L AR +FD M +D WN +++ Y G EA
Sbjct: 143 VVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNAC 290
L E M N + W + GY +G A+++ +M ++ D V ++ L+AC
Sbjct: 203 SLLEMMP--CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSAC 260
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ +G+L+LG+ I + G + ++ NA+I MY++ G++ A +F+ + E+ ++TW
Sbjct: 261 ADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWT 320
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
+++G A E +F +M+ G PN VT ++L C+ + + GK + +
Sbjct: 321 TIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSK 380
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
+ + ++D+ R+GK+ EA V S+
Sbjct: 381 YGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 41/311 (13%)
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNA-LITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
H LK K+ H + + TG + DN+ A I S G L +AY +F N
Sbjct: 24 HGNNLKTLKQSHCYMIITGLN-RDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHN 82
Query: 351 AMLSGFAHMDRVDEVSF---LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
M+ + +D + S ++R++ A+P+ T VL + R++++ G++ H +
Sbjct: 83 TMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQV 142
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGE---- 463
+ F + + L+ MY G + +A+++FD + +D + A++ GYG GE
Sbjct: 143 VVF-GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEA 201
Query: 464 -----------------------------GQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
A+ +F+ M ++PD V ++AVL+AC+
Sbjct: 202 RSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACA 261
Query: 495 HSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMW 554
G + G+ + VD G+ + + D++ ++G + KA ++ + + W
Sbjct: 262 DLGSLELGERICS-YVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNV-VTW 319
Query: 555 ATLIGACRIHG 565
T+I HG
Sbjct: 320 TTIIAGLATHG 330
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 226/408 (55%), Gaps = 32/408 (7%)
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYS-------------------- 326
+ AC+ + + G ++HG +R GFD +V+ LI++Y+
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 327 -----------RCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHE 375
RCGD+ A LF+ M E+ I WNAM+SG+A + E +F M E
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 376 GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLE 435
G + N V + SVL C ++ L G+ H YI +R + K + L TLVD+YA+ G + +
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYI-ERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 436 AKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSH 495
A VF + ++ T+++ + G M G G+ L +F M + + P+ V V+VL CS
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 496 SGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWA 555
G V +GQ F M +++GI P++EHY C+ DL+ RAG L A II +MP KP A+W+
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWS 413
Query: 556 TLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLG 615
+L+ A R++ N LG A+ K+LE++ + G Y+L++N+YA + W ++ VR M++ G
Sbjct: 414 SLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKG 473
Query: 616 VKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
V+K PGC+ ++V GE FFVGD S+P +I + ++ ++ AGY
Sbjct: 474 VRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGY 521
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 185/386 (47%), Gaps = 11/386 (2%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYA--RFNLFDDACIVTESSSSLEPLHWNMLISMFV 121
+Q+HA++ G ++ ++ V A D A + + S N +I
Sbjct: 23 RQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHC 82
Query: 122 RNELFVEALSAYRKMLR--KQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWS 179
++ + ++ YR++L + PD +T +++AC L +G++VH
Sbjct: 83 KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDND 142
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
V L+S+YA+ G L+ +F+++P D V +++ A G A KLFE M E
Sbjct: 143 PHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPE 202
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKL 298
+ I WN M GY G + AL + M+ + ++ VAM+ L+AC+ +GAL
Sbjct: 203 R----DPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 299 GKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAH 358
G+ H + R + + L+ +Y++CGD+ A +F MEEK + TW++ L+G A
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAM 318
Query: 359 MDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE-QFKEYL 417
++ LF M +G PN VT SVL C+ + + G+ H M+ E + L
Sbjct: 319 NGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQL 377
Query: 418 LLWNTLVDMYARSGKVLEAKRVFDSL 443
+ LVD+YAR+G++ +A + +
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQM 403
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 128/335 (38%), Gaps = 69/335 (20%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDD--------------- 97
C + G Q+H I GFD + + L+S YA D
Sbjct: 117 ACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVC 176
Query: 98 ------ACI----------VTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQV 141
AC + E +P+ WN +IS + + EAL+ + M + V
Sbjct: 177 RTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV 236
Query: 142 IPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARH 201
+ SVL AC +L G H IE + ++ + LV +YAK G +E A
Sbjct: 237 KVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAME 296
Query: 202 LFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGN 261
+F M E++ +W++ ++ A G + +LF M+++GV N
Sbjct: 297 VFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNA--------------- 341
Query: 262 FKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRN-- 319
V V L CS +G + G+ H ++R F + + +
Sbjct: 342 -------------------VTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQLEHYG 381
Query: 320 ALITMYSRCGDLGHAYMLFQRMEEKG-LITWNAML 353
L+ +Y+R G L A + Q+M K W+++L
Sbjct: 382 CLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 197/711 (27%), Positives = 311/711 (43%), Gaps = 127/711 (17%)
Query: 60 LSPGKQLHA-----QVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWN 114
LS G +HA ++ G + L+S YA+ D+A ++ E + N
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI-EV 173
+++ +V+ EA + +R+M + V ++ +L A + VE+ + E
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREMPKNVV-----SWTVMLTALCDDGRSEDAVELFDEMPER 167
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
+ W N LV+ + G +E A+ +FD MP RD VSWN +I Y EA L
Sbjct: 168 NVVSW-----NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLL 222
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN----- 288
F M E+ N++ W +M GY G+ + A +L +M + AM+ G
Sbjct: 223 FGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELY 278
Query: 289 -----------------------------ACSHIGA--LKLGKEIHGHAVRTGFDVLD-- 315
AC +G +LG+++H + G++ +D
Sbjct: 279 REALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHD 338
Query: 316 ------------------------------NVRNALITMYSRCGDLGHAYMLFQRME--- 342
N +I Y + GDL A LF+R++
Sbjct: 339 GRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLH 398
Query: 343 -----------------------------EKGLITWNAMLSGFAHMDRVDEVSFLFRQML 373
+K +TW M+SG + E + L M+
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMV 458
Query: 374 HEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ-FKEYLLLWNTLVDMYARSGK 432
G +P T + +L +NL GK HC I K + L+L N+LV MYA+ G
Sbjct: 459 RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGA 518
Query: 433 VLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
+ +A +F + ++D V++ +MI G G ALN+F+EM KP+ V + VL+A
Sbjct: 519 IEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Query: 493 CSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPA 552
CSHSGL+ +G LF+ M + Y I P I+HY M DL GRAG L +A+E I+ +P+ P
Sbjct: 579 CSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHT 638
Query: 553 MWATLIGAC----RIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVR 608
++ L+G C R + E AA +LLE+ P ++ ++ + N+YA G E+R
Sbjct: 639 VYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMR 698
Query: 609 TYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGE-IYPLMDGLNELM 658
M GVKK PGC+WV V G + F GD S A + + P+ G NE++
Sbjct: 699 KEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPIFCG-NEML 748
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 138/326 (42%), Gaps = 66/326 (20%)
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVS----WNTIISCYASRGTWGEAFKLFERMQ 238
AL+ G L ARHL D +P+R ++ W +++S YA G EA LFE M
Sbjct: 45 EEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP 104
Query: 239 EEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIG---- 294
E NI+ N M GY+ A L +M ++ V+ V L A G
Sbjct: 105 ER----NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNV----VSWTVMLTALCDDGRSED 156
Query: 295 ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLS 354
A++L E+ V + N L+T R GD+ A +F M + +++WNAM+
Sbjct: 157 AVELFDEMPERNVVSW--------NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIK 208
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
G+ D ++E LF M +E N VT
Sbjct: 209 GYIENDGMEEAKLLFGDM----SEKNVVT------------------------------- 233
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
W ++V Y R G V EA R+F + R+ V++TAMI G+ + AL +F EM
Sbjct: 234 -----WTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 475 CK--FKIKPDHVAMVAVLTACSHSGL 498
K + P+ ++++ AC G+
Sbjct: 289 KKDVDAVSPNGETLISLAYACGGLGV 314
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 57 VNSLSPGKQLHAQV--ISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWN 114
++L GK +H + + +D + I+ LVS YA+ +DA + + + WN
Sbjct: 479 TSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWN 538
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI-EV 173
+I + L +AL+ +++ML P+ T+ VL AC G+E+ KA+ E
Sbjct: 539 SMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKET 598
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDD 211
S+ + + +++ + + GKL+ A +P D
Sbjct: 599 YSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPD 636
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/619 (28%), Positives = 305/619 (49%), Gaps = 47/619 (7%)
Query: 75 FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL-HWNMLISMFVRNE-LFVEALSA 132
++N +++ Y +FN +A + ES + L +N L+S F + + EA+
Sbjct: 50 LERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEM 109
Query: 133 YRKMLRKQ---VIPDEFTYPSVLKACGELLDCASGVEVHKA-IEVGSMGWSLFVHNALVS 188
+ +M RK+ + D+FT +++K +L + G ++H ++ G+ G + F ++L+
Sbjct: 110 FGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDG-TKFAVSSLIH 168
Query: 189 MYAKFGKLEVARHLFDN--MPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
MY+K GK + ++F+ + D V+ N +I+ Y G +A +F R E +
Sbjct: 169 MYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELN---DT 225
Query: 247 IIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEIHGH 305
I WNT+ GY G + ALK+ M + + D + LN S + +LK+GKE+H
Sbjct: 226 ISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHAR 285
Query: 306 AVRTGFDVLDNVRNALITMYSRCGDLGHA------------------------------- 334
++ G V + ++ +Y +CG++ +A
Sbjct: 286 VLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEA 345
Query: 335 YMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQML-HEGAEPNYVTIASVLPLCAR 393
LF + EK L+ W AM G+ ++ + D V L R + +E P+ + + SVL C+
Sbjct: 346 KRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSL 405
Query: 394 IANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTA 453
A ++ GKE H + ++ + L+ VDMY++ G V A+R+FDS RD V Y A
Sbjct: 406 QAYMEPGKEIHGHSLRTGILMDKKLV-TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNA 464
Query: 454 MIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDY 513
MI G G + FE+M + KPD + +A+L+AC H GLV +G+ F+ M++ Y
Sbjct: 465 MIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAY 524
Query: 514 GIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPA-MWATLIGACRIHGNTVLGEW 572
I P HY CM DL+G+A L+KA E++ + A + + AC + NT L +
Sbjct: 525 NISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKE 584
Query: 573 AAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFS 632
KLL ++ + YI IAN YA++G W E+ +R MR ++ GC+W ++ +F
Sbjct: 585 VEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFH 644
Query: 633 PFFVGDTSNPHAGEIYPLM 651
F D S+ IY ++
Sbjct: 645 MFTSSDISHYETEAIYAML 663
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 199/452 (44%), Gaps = 75/452 (16%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N LV++Y+K G L AR++FD M ER+ SWN +I+ Y EA +LFE + E
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFE---SDNCE 83
Query: 244 MNIIIWNTMAGGYLHA-GNFKGALKLLSQM----RTSIHLDHVAMVVGLNACSHIGALKL 298
++I +NT+ G+ G A+++ +M + I +D + + + + +
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 299 GKEIHGHAVRTGFD--------------------------------VLDNV-RNALITMY 325
G+++HG V+TG D +D+V RNA+I Y
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 326 SRCGDLGHAYMLFQRMEE-KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTI 384
R GD+ A +F R E I+WN +++G+A +E + M G + + +
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 385 ASVLPLCARIANLQHGKEFHCYIMKREQFKEYL----------------------LLW-- 420
+VL + + + +L+ GKE H ++K + LL+
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 421 ------NTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
++++ Y+ GK++EAKR+FDSL+ ++ V +TAM GY + L +
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF 383
Query: 475 CKFKIK-PDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAG 533
+ PD + MV+VL ACS + G+ + + GI+ + D++ + G
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLVTAFVDMYSKCG 442
Query: 534 LLNKAKEIITRMPYKPTPAMWATLIGACRIHG 565
+ A+ I ++ M+ +I C HG
Sbjct: 443 NVEYAERIFDS-SFERDTVMYNAMIAGCAHHG 473
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 229/417 (54%), Gaps = 17/417 (4%)
Query: 256 YLHAGN-FKGALKLLSQMRTSIH-LDHVAMVVGLNACSHIGALKL-GKEIHGHAVRTGFD 312
YL +G K L + R S +D +++ + S A L G++IH + GF+
Sbjct: 38 YLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFN 97
Query: 313 VLDNVRNALITMYSRCGDLGHAYMLFQRMEEK-GLITWNAMLSGFAHMDRVDEVSFLFRQ 371
+ ++ +L+ YS GD+ +A +F EK ++ W AM+S + + E LF++
Sbjct: 98 AVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKR 157
Query: 372 MLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ-FKEYLLLWNTLVDMYARS 430
M E E + V + L CA + +Q G+E + +KR++ L L N+L++MY +S
Sbjct: 158 MEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKS 217
Query: 431 GKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFK------IKPDHV 484
G+ +A+++FD R+D TYT+MI GY + G+ Q +L +F++M I P+ V
Sbjct: 218 GETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDV 277
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
+ VL ACSHSGLV +G+ F+ M+ DY + PR H+ CM DLF R+G L A E I +
Sbjct: 278 TFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQ 337
Query: 545 MPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSEL 604
MP KP +W TL+GAC +HGN LGE ++ E+ DH G Y+ ++N+YA+ G W E
Sbjct: 338 MPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEK 397
Query: 605 AEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHA---GEIYPLMDGLNELM 658
+++R +R ++ PG +W+++G + F G +N GEI ++ L M
Sbjct: 398 SKMRDRVRK---RRMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCLVSCM 451
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/508 (20%), Positives = 208/508 (40%), Gaps = 104/508 (20%)
Query: 109 EPLHWNMLISMFVRNELFVEALSAYRKMLRKQ-VIPDEFTYPSVLK-ACGELLDCASGVE 166
+ L N + ++ + ++AL +R R+ D F+ +K + + G +
Sbjct: 27 KSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQ 86
Query: 167 VHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDD-VSWNTIISCYASRG 225
+H + + + +LV Y+ G ++ AR +FD PE+ + V W +IS Y
Sbjct: 87 IHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENE 146
Query: 226 TWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVV 285
EA +LF+RM+ E +E LD V + V
Sbjct: 147 NSVEAIELFKRMEAEKIE----------------------------------LDGVIVTV 172
Query: 286 GLNACSHIGALKLGKEIHGHAV----RTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRM 341
L+AC+ +GA+++G+EI+ ++ R D+ +RN+L+ MY + G+ A LF
Sbjct: 173 ALSACADLGAVQMGEEIYSRSIKRKRRLAMDL--TLRNSLLNMYVKSGETEKARKLFDES 230
Query: 342 EEKGLITWNAMLSGFAHMDRVDEVSFLFRQM--LHEGAE----PNYVTIASVLPLCARIA 395
K + T+ +M+ G+A + E LF++M + + + PN VT VL C+
Sbjct: 231 MRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSG 290
Query: 396 NLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMI 455
++ GK ++ K + +VD++ RSG + +A + +
Sbjct: 291 LVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMP----------- 339
Query: 456 RGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQ---EMVDD 512
IKP+ V +L ACS G V G+ + + E+ D
Sbjct: 340 -----------------------IKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRD 376
Query: 513 YGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEW 572
+ + Y +++++ G+ ++ ++ R+ + P G I +++ E+
Sbjct: 377 H-----VGDYVALSNIYASKGMWDEKSKMRDRVRKRRMP-------GKSWIELGSIINEF 424
Query: 573 AAGKLLEMKPDHSGYYILIANMYAAAGC 600
+G PD++ +++ + C
Sbjct: 425 VSG------PDNNDEQLMMGEISEVLRC 446
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 180/449 (40%), Gaps = 85/449 (18%)
Query: 8 SLKNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLH 67
+LK ++ G A F H SP F +SL G+Q+H
Sbjct: 34 TLKQYLESGEPIKALLDF----RHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIH 88
Query: 68 AQVISLGFDQNTIMLPRLVSFYARFNLFDDA-CIVTESSSSLEPLHWNMLISMFVRNELF 126
A V LGF+ + LV FY+ D A + E+ + W +IS + NE
Sbjct: 89 ALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENS 148
Query: 127 VEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGS-MGWSLFVHN 184
VEA+ +++M +++ D L AC +L G E++ ++I+ + L + N
Sbjct: 149 VEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRN 208
Query: 185 ALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM 244
+L++MY K G+ E AR LFD +D ++ ++I YA G E+ +LF++M
Sbjct: 209 SLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM------- 261
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
K + Q + T I + V + L ACSH G ++ GK H
Sbjct: 262 ----------------------KTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKR-H 298
Query: 304 GHAVRTGFDVLDNVRNA----LITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHM 359
++ +++ R A ++ ++ R G L A+ +M K
Sbjct: 299 FKSMIMDYNL--KPREAHFGCMVDLFCRSGHLKDAHEFINQMPIK--------------- 341
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI--MKREQFKEYL 417
PN V ++L C+ N++ G+E I + R+ +Y+
Sbjct: 342 -------------------PNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYV 382
Query: 418 LLWNTLVDMYARSGKVLEAKRVFDSLTRR 446
L N +YA G E ++ D + +R
Sbjct: 383 ALSN----IYASKGMWDEKSKMRDRVRKR 407
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 254/472 (53%), Gaps = 42/472 (8%)
Query: 148 YPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP 207
+ S+L+ C L GV VH I + +L + + LV +YA G EVA
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAH------- 147
Query: 208 ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALK 267
++F+RM + + + WN++ GY G ++ A+
Sbjct: 148 ------------------------EVFDRMSKR--DSSPFAWNSLISGYAELGQYEDAMA 181
Query: 268 LLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYS 326
L QM + D L AC IG++++G+ IH V+ GF V NAL+ MY+
Sbjct: 182 LYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYA 241
Query: 327 RCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIAS 386
+CGD+ A +F + K ++WN+ML+G+ H + E +FR M+ G EP+ V I+S
Sbjct: 242 KCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISS 301
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR 446
VL AR+ + +HG++ H ++++R E L + N L+ +Y++ G++ +A +FD + R
Sbjct: 302 VL---ARVLSFKHGRQLHGWVIRRGMEWE-LSVANALIVLYSKRGQLGQACFIFDQMLER 357
Query: 447 DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLF 506
D V++ A+I + G L FE+M + KPD + V+VL+ C+++G+V G+ LF
Sbjct: 358 DTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLF 414
Query: 507 QEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKE-IITRMPYKPTPAMWATLIGACRIHG 565
M +YGI P++EHYACM +L+GRAG++ +A I+ M + P +W L+ AC +HG
Sbjct: 415 SLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHG 474
Query: 566 NTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVK 617
NT +GE AA +L E++PD+ + L+ +Y+ A ++ VR M + G++
Sbjct: 475 NTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 187/385 (48%), Gaps = 42/385 (10%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLE--PL 111
C ++ ++ G ++H + N + +LV YA + A V + S + P
Sbjct: 102 CYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPF 161
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN LIS + + +A++ Y +M V PD FT+P VLKACG + G +H+ +
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
G+ ++V NALV MYAK G + AR++FD +P +D VSWN++++ Y G EA
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEAL 281
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
+F M + G+E D VA+ + +
Sbjct: 282 DIFRLMVQNGIEP----------------------------------DKVAIS---SVLA 304
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
+ + K G+++HG +R G + +V NALI +YS+ G LG A +F +M E+ ++WNA
Sbjct: 305 RVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNA 364
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
++S AH + + + F QM A+P+ +T SVL LCA ++ G+ + K
Sbjct: 365 IIS--AHSKNSNGLKY-FEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEY 421
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEA 436
+ + +V++Y R+G + EA
Sbjct: 422 GIDPKMEHYACMVNLYGRAGMMEEA 446
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + S+ G+ +H ++ GF + +L LV YA+ A V + + +
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS 263
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN +++ ++ + L EAL +R M++ + PD+ SVL +L G ++H +
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVI 320
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
M W L V NAL+ +Y+K G+L A +FD M ERD VSWN IIS ++ K
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLK 377
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
FE+M H N K D + V L+ C++
Sbjct: 378 YFEQM--------------------HRANAKP--------------DGITFVSVLSLCAN 403
Query: 293 IGALKLGKEIHGHAVRT-GFDVLDNVRNALITMYSRCGDLGHAY-MLFQRME-EKGLITW 349
G ++ G+ + + G D ++ +Y R G + AY M+ Q M E G W
Sbjct: 404 TGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVW 463
Query: 350 NAML 353
A+L
Sbjct: 464 GALL 467
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 255/490 (52%), Gaps = 45/490 (9%)
Query: 215 NTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT 274
N + YAS G A KLF+ + E + + W T+ + G ++KL +MR
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLS--EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRR 104
Query: 275 S-IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGH 333
+ +D V++V C+ + L ++ HG AV+ G V NAL+ MY +CG +
Sbjct: 105 KRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSE 164
Query: 334 AYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEP-------------- 379
+F+ +EEK +++W +L + ++ +F +M A
Sbjct: 165 VKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFT 224
Query: 380 ------------------NYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK------E 415
N+VT+ S+L CA+ NL G+ H Y +K+E +
Sbjct: 225 REVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYD 284
Query: 416 YLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
+++ LVDMYA+ G + + VF + +R+ VT+ A+ G M G+G+M +++F +M
Sbjct: 285 DVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI 344
Query: 476 KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLL 535
+ ++KPD + AVL+ACSHSG+V +G F + YG+ P+++HYACM DL GRAGL+
Sbjct: 345 R-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLI 402
Query: 536 NKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMY 595
+A+ ++ MP P + +L+G+C +HG + E +L++M P ++ Y IL++NMY
Sbjct: 403 EEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMY 462
Query: 596 AAAGCWSELAE-VRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGL 654
A G S++A+ +R +R G++K PG + + V F GD S+P EIY ++ +
Sbjct: 463 VAEG-RSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEV 521
Query: 655 NELMKDAGYI 664
E ++ AGY+
Sbjct: 522 IERIRSAGYV 531
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 217/444 (48%), Gaps = 38/444 (8%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQ--NTIMLPRLVSFYARF-------NLFDDACIVTES 104
C + + L PGK+LHA + + G + + + L FYA LFD+ +
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL---- 71
Query: 105 SSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASG 164
S + + W L+S F R L V ++ + +M RK+V D+ + + C +L D
Sbjct: 72 -SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 165 VEVHK-AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYAS 223
+ H A+++G + S+ V NAL+ MY K G + + +F+ + E+ VSW ++
Sbjct: 131 QQGHGVAVKMGVLT-SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 224 RGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM--RTSIHLDHV 281
++F M E N + W M GYL AG + L+LL++M R L+ V
Sbjct: 190 WEGLERGREVFHEMPER----NAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFV 245
Query: 282 AMVVGLNACSHIGALKLGKEIHGHAVRTGF---------DVLDNVRNALITMYSRCGDLG 332
+ L+AC+ G L +G+ +H +A++ DV+ V AL+ MY++CG++
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVM--VGTALVDMYAKCGNID 303
Query: 333 HAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA 392
+ +F+ M ++ ++TWNA+ SG A + V +F QM+ E +P+ +T +VL C+
Sbjct: 304 SSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACS 362
Query: 393 RIANLQHG-KEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-TRRDEVT 450
+ G + FH ++ + + + +VD+ R+G + EA+ + + +EV
Sbjct: 363 HSGIVDEGWRCFHS--LRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVV 420
Query: 451 YTAMIRGYGMKGEGQMALNIFEEM 474
+++ + G+ ++A I E+
Sbjct: 421 LGSLLGSCSVHGKVEIAERIKREL 444
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 380 NYVTIASVLPLCARIANLQHGKEFHCYIMK---REQFKEYLLLWNTLVDMYARSGKVLEA 436
+Y + +L CA + L+ GKE H + ++ + Y L N L YA SG+++ A
Sbjct: 5 SYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSY--LSNALFQFYASSGEMVTA 62
Query: 437 KRVFDS--LTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
+++FD L+ +D V +T ++ + G ++ +F EM + +++ D V++V + C+
Sbjct: 63 QKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCA 122
Query: 495 H---SGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTP 551
G QG + +M G++ ++ + D++G+ GL+++ K I + K
Sbjct: 123 KLEDLGFAQQGHGVAVKM----GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVV 178
Query: 552 AMWATLI 558
+ W ++
Sbjct: 179 S-WTVVL 184
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/564 (27%), Positives = 271/564 (48%), Gaps = 46/564 (8%)
Query: 65 QLHAQVISLGFDQN-TIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRN 123
Q+HA++I G +Q+ ++ + S + + + V E S WN LI +
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 124 ELFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
LF E +S +M+R + PDE+T+P V+K C G VH + + V
Sbjct: 88 FLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVV 147
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
+ V Y K L AR +F MPER+ VSW ++ Y G EA +F+ M E
Sbjct: 148 GTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER-- 205
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
N+ WN + G + +G+ A KL +M + + +M+ G
Sbjct: 206 --NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDG---------------- 247
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
Y++ GD+ A LF+ + W+A++ G+A +
Sbjct: 248 ----------------------YAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQP 285
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR-EQFKEYLLLWN 421
+E +F +M + +P+ + ++ C+++ + ++ Y+ +R +F + ++
Sbjct: 286 NEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-P 344
Query: 422 TLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
L+DM A+ G + A ++F+ + +RD V+Y +M+ G + G G A+ +FE+M I P
Sbjct: 345 ALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVP 404
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
D VA +L C S LV +G F+ M Y I+ +HY+C+ +L R G L +A E+
Sbjct: 405 DEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYEL 464
Query: 542 ITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCW 601
I MP++ + W +L+G C +HGNT + E A L E++P +G Y+L++N+YAA W
Sbjct: 465 IKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRW 524
Query: 602 SELAEVRTYMRNLGVKKAPGCAWV 625
+++A +R M G+ K G +W+
Sbjct: 525 TDVAHLRDKMNENGITKICGRSWI 548
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 193/442 (43%), Gaps = 50/442 (11%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C N + G +H V+ +GFD++ ++ V FY + A V + W
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSW 179
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
L+ +V++ GEL + S ++ +
Sbjct: 180 TALVVAYVKS--------------------------------GELEEAKSMFDLMPERNL 207
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
GS W NALV K G L A+ LFD MP+RD +S+ ++I YA G A L
Sbjct: 208 GS--W-----NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDL 260
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSH 292
F EE +++ W+ + GY G A K+ S+M ++ D MV ++ACS
Sbjct: 261 F----EEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQ 316
Query: 293 IGALKLGKEIHG--HAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+G +L +++ H F V ALI M ++CG + A LF+ M ++ L+++
Sbjct: 317 MGCFELCEKVDSYLHQRMNKFSS-HYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYC 375
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
+M+ G A E LF +M+ EG P+ V +L +C + ++ G + + K+
Sbjct: 376 SMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKK 435
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVT-YTAMIRGYGMKGEGQMALN 469
++ +V++ +R+GK+ EA + S+ + + +++ G + G ++A
Sbjct: 436 YSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEV 495
Query: 470 IFEEMCKFKIKPDHVAMVAVLT 491
+ + F+++P +L+
Sbjct: 496 VARHL--FELEPQSAGSYVLLS 515
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 167/632 (26%), Positives = 299/632 (47%), Gaps = 61/632 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGF--DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEP 110
C ++ L+ G+ LH VI G+ + + + ++S Y++ + A V E +
Sbjct: 298 ACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDV 357
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLR-KQVIPDEFTYPSVLKACGELLDCASGVEVHK 169
+ N +++ F N +F EA +M ++ PD T S+ CG+L G VH
Sbjct: 358 ISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHG 417
Query: 170 -AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+ + +L V N+++ MY K G A LF RD VSWN++IS ++ G
Sbjct: 418 YTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTH 477
Query: 229 EAFKLFE--------------------------------------------------RMQ 238
+A LF+ R++
Sbjct: 478 KAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLE 537
Query: 239 EEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT--SIHLDHVAMVVGLNACSHIGAL 296
++ WN++ G +G+ +L+ M I D + ++ ++A ++G +
Sbjct: 538 TMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLV 597
Query: 297 KLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF 356
G+ HG A+++ ++ ++N LITMY RC D+ A +F + + L +WN ++S
Sbjct: 598 LQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISAL 657
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
+ EV LFR + EPN +T +L ++ + +G + HC++++R F+
Sbjct: 658 SQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR-GFQAN 713
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK 476
+ LVDMY+ G + +VF + + ++I +G G G+ A+ +F+E+
Sbjct: 714 PFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSS 773
Query: 477 -FKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLL 535
+++P+ + +++L+ACSHSG + +G +++M + +G+ P EH + D+ GRAG L
Sbjct: 774 NSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKL 833
Query: 536 NKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMY 595
+A E IT + +W L+ AC HG+T LG+ A L EM+PD++ YYI +AN Y
Sbjct: 834 REAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTY 893
Query: 596 AAAGCWSELAEVRTYMRNLGVKKAPGCAWVDV 627
G W E +R + + +KK PG + +DV
Sbjct: 894 VGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 224/491 (45%), Gaps = 78/491 (15%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARF-NLFDDACIVTESSSSLEPLHWNMLISMFVR 122
+ +H + G Q+ +L++FY R L +C+ E + + WN +I+ +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEK-DVIVWNSMITALNQ 165
Query: 123 NELFVEALSAYRKMLRKQVIPDEF------------TYPSVLKACGELLDCASGVEVHKA 170
N ++ A+ + +M+ K +EF + + + C +L C A
Sbjct: 166 NGRYIAAVGLFIEMIHK---GNEFDSTTLLLAASALSSLHLSRKCS-MLHCL-------A 214
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
IE G +G S NAL+++YAK L A +F +M RD
Sbjct: 215 IETGLVGDSSLC-NALMNLYAKGENLSSAECVFTHMEHRD-------------------- 253
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNA 289
I+ WNT+ L G+ + +L+ M S D V ++A
Sbjct: 254 ---------------IVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 290 CSHIGALKLGKEIHGHAVRTGF--DVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
CS I L LG+ +HG +++G+ + +V N++I+MYS+CGD A +F+ + + +I
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVI 358
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLH-EGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
+ NA+L+GFA +E + QM + +P+ T+ S+ +C ++ + G+ H Y
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM 466
++ E L + N+++DMY + G +A+ +F + T RD V++ +MI + G
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHK 478
Query: 467 ALNIFEEM------CKFKIKPDHVAMVAVLTACSHSGLVAQGQVL---FQEMVDDYGIIP 517
A N+F+E+ KF + ++A+LT+C S + G+ + Q++ D
Sbjct: 479 AKNLFKEVVSEYSCSKFSLS----TVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL 534
Query: 518 RIEHYACMADL 528
R+E + DL
Sbjct: 535 RLETMSETRDL 545
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 171/365 (46%), Gaps = 14/365 (3%)
Query: 209 RDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKL 268
+D + + +++ Y G + LF+ ++E+ ++I+WN+M G + A+ L
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEK----DVIVWNSMITALNQNGRYIAAVGL 175
Query: 269 LSQMRTSIH----LDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITM 324
+M IH D +++ +A S + + +H A+ TG ++ NAL+ +
Sbjct: 176 FIEM---IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNL 232
Query: 325 YSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTI 384
Y++ +L A +F ME + +++WN +++ + F+ M G E + VT
Sbjct: 233 YAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTF 292
Query: 385 ASVLPLCARIANLQHGKEFHCYIMKREQFKE-YLLLWNTLVDMYARSGKVLEAKRVFDSL 443
+ V+ C+ I L G+ H ++K E ++ + N+++ MY++ G A+ VF+ L
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
Query: 444 TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKF-KIKPDHVAMVAVLTACSHSGLVAQG 502
RD ++ A++ G+ G + A I +M KI+PD +V++ + C +G
Sbjct: 353 VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412
Query: 503 QVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACR 562
+ + V +E + D++G+ GL +A E++ + W ++I A
Sbjct: 413 RAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFS 471
Query: 563 IHGNT 567
+G T
Sbjct: 472 QNGFT 476
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/608 (27%), Positives = 304/608 (50%), Gaps = 20/608 (3%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFN--LFDDACIVTESSSSLEP 110
C+ V+ S G Q+H ++ GF + + L+S Y + + DD + + +
Sbjct: 190 ACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDV 249
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASGVEVH- 168
WN ++S V+ +A + +M R + D FT ++L +C + G E+H
Sbjct: 250 ASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHG 309
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+AI +G M L V+NAL+ Y+KF ++ L++ M +D V++ +I+ Y S G
Sbjct: 310 RAIRIGLMQ-ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVD 368
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGL 287
A ++F + E+ N I +N + G+ G+ ALKL + M + + L ++ +
Sbjct: 369 SAVEIFANVTEK----NTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQR----MEE 343
+AC + K+ ++IHG ++ G ++ AL+ M +RC + A +F + ++
Sbjct: 425 DACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDS 484
Query: 344 KGLITWNAMLSGFAHMDRVDE-VSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKE 402
T +++ G+A D+ VS R + + + V++ +L +C + + G +
Sbjct: 485 SKATT--SIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKG 462
HCY +K F + + L N+L+ MYA+ +A ++F+++ D +++ ++I Y ++
Sbjct: 543 IHCYALKAGYFSD-ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQR 601
Query: 463 EGQMALNIFEEMCKFKIKPDHVAMVAVLTAC--SHSGLVAQGQVLFQEMVDDYGIIPRIE 520
G AL ++ M + +IKPD + + V++A + S ++ + LF M Y I P E
Sbjct: 602 NGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTE 661
Query: 521 HYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEM 580
HY + G GLL +A++ I MP +P ++ L+ +CRIH NT + + A +L
Sbjct: 662 HYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILST 721
Query: 581 KPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTS 640
KP+ YIL +N+Y+A+G W +R MR G +K P +W+ + F DTS
Sbjct: 722 KPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTS 781
Query: 641 NPHAGEIY 648
+P +IY
Sbjct: 782 HPQEKDIY 789
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 140/562 (24%), Positives = 242/562 (43%), Gaps = 82/562 (14%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRN 123
K +HA + L ++ T + L+S Y + +A +V S SS + + LIS F R
Sbjct: 100 KAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 124 ELFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
L +EAL + +M + ++ P+E+T+ ++L AC + + G+++H I S+FV
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 183 HNALVSMYAKF--GKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE- 239
N+L+S+Y K + LFD +P+RD SWNT++S G +AF LF M
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLG 299
EG ++ +T+ L++C+ L G
Sbjct: 279 EGFGVDSFTLSTL----------------------------------LSSCTDSSVLLRG 304
Query: 300 KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGH---------------------AYM-- 336
+E+HG A+R G +V NALI YS+ D+ AYM
Sbjct: 305 RELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSF 364
Query: 337 --------LFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVL 388
+F + EK IT+NA+++GF + LF ML G E ++ S +
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 389 PLCARIANLQHGKEFHCYIMK-REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD 447
C ++ + ++ H + +K F + L+DM R ++ +A+ +FD
Sbjct: 425 DACGLVSEKKVSEQIHGFCIKFGTAFNP--CIQTALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 448 EVT--YTAMIRGYGMKGEGQMALNIF-EEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQV 504
+ + T++I GY G A+++F +C+ K+ D V++ +L C G G
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 505 LFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRI- 563
+ + G I + ++ + + A +I M + W +LI +C I
Sbjct: 543 IHCYAL-KAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVIS-WNSLI-SCYIL 599
Query: 564 --HGNTVLGEWAAGKLLEMKPD 583
+G+ L W+ E+KPD
Sbjct: 600 QRNGDEALALWSRMNEKEIKPD 621
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 172/406 (42%), Gaps = 57/406 (14%)
Query: 186 LVSMYAKFGKLEVARHL---FDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
L+ + A++ +EV + + F + E N +IS Y G EA +F + V
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTV 145
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS--IHLDHVAMVVGLNACSHIGALKLGK 300
+ + + G+ ALK+ +MR + + + V L AC + LG
Sbjct: 146 ----VSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 301 EIHGHAVRTGFDVLDNVRNALITMY-----SRCGDLGHAYMLFQRMEEKGLITWNAMLSG 355
+IHG V++GF V N+L+++Y S C D+ LF + ++ + +WN ++S
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV---LKLFDEIPQRDVASWNTVVSS 258
Query: 356 FAHMDRVDEVSFLFRQMLH-EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
+ + LF +M EG + T++++L C + L G+E H ++ +
Sbjct: 259 LVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ 318
Query: 415 E----------YLLLWN-----------------TLVDM---YARSGKVLEAKRVFDSLT 444
E Y W+ T +M Y G V A +F ++T
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 445 RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQV 504
++ +TY A++ G+ G G AL +F +M + ++ ++ + + AC GLV++ +V
Sbjct: 379 EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSEKKV 435
Query: 505 LFQEMVDDYGIIPRIEHYACMA----DLFGRAGLLNKAKEIITRMP 546
E + + I C+ D+ R + A+E+ + P
Sbjct: 436 --SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 157/544 (28%), Positives = 274/544 (50%), Gaps = 40/544 (7%)
Query: 85 LVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPD 144
L+S Y + L D+A + + WN LIS FV ++ AL +M R+ ++ D
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFV-DKGSPRALEFLVRMQREGLVLD 237
Query: 145 EFTYPSVLKAC--GELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHL 202
F P LKAC G LL G ++H + + S F +AL+ MY+ G L A +
Sbjct: 238 GFALPCGLKACSFGGLL--TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADV 295
Query: 203 FDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNF 262
F ++ V ++ +WN+M G+L
Sbjct: 296 F--------------------------------HQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 263 KGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNAL 321
+ AL LL Q+ ++ + D + L C + L+LG ++H V +G+++ V + L
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSIL 383
Query: 322 ITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNY 381
+ +++ G++ A+ LF R+ K +I ++ ++ G +LFR+++ G + +
Sbjct: 384 VDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQ 443
Query: 382 VTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFD 441
++++L +C+ +A+L GK+ H +K+ ++ + LVDMY + G++ +FD
Sbjct: 444 FIVSNILKVCSSLASLGWGKQIHGLCIKK-GYESEPVTATALVDMYVKCGEIDNGVVLFD 502
Query: 442 SLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQ 501
+ RD V++T +I G+G G + A F +M I+P+ V + +L+AC HSGL+ +
Sbjct: 503 GMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEE 562
Query: 502 GQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGAC 561
+ + M +YG+ P +EHY C+ DL G+AGL +A E+I +MP +P +W +L+ AC
Sbjct: 563 ARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTAC 622
Query: 562 RIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPG 621
H N L A KLL+ PD Y ++N YA G W +L++VR + LG K++ G
Sbjct: 623 GTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKES-G 681
Query: 622 CAWV 625
+W+
Sbjct: 682 MSWI 685
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/600 (26%), Positives = 271/600 (45%), Gaps = 50/600 (8%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C V + G+ + A VI G QN + ++S Y F L DA V + S + W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 114 NMLISMFVRNELFVEALSAYRKML-RKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
++S + + +A+ YR+ML ++ +EF Y +VLKACG + D G+ V++ I
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
++ + + N++V MY K G+L A F + SWNT+IS Y G EA
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
LF RM + N++ WN + G++ G+ + L+ R + LD A+ GL ACS
Sbjct: 195 LFHRMPQP----NVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME---EKGLITW 349
G L +GK++H V++G + +ALI MYS CG L +A +F + + + W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
N+MLSGF + + +L Q+ + T++ L +C NL+ G + H ++
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVV 370
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
+Y ++ + LVD++A G + +A ++F L +D + ++ +IRG G +A
Sbjct: 371 SGYELDY-IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFY 429
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQ---------------VLFQEMVDDYG 514
+F E+ K + D + +L CS + G+ V +VD Y
Sbjct: 430 LFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYV 489
Query: 515 IIPRIEHYACMAD---------------LFGRAGLLNKAKEIITRM---PYKPTPAMWAT 556
I++ + D FG+ G + +A +M +P +
Sbjct: 490 KCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLG 549
Query: 557 LIGACRIHGNTVLGEWAAGKLLEMKPDHS-----GYYILIANMYAAAGCWSELAEVRTYM 611
L+ ACR G L E A L MK ++ +Y + ++ AG + E E+ M
Sbjct: 550 LLSACRHSG---LLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 197/451 (43%), Gaps = 29/451 (6%)
Query: 152 LKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDD 211
L+ CG++ G + + + ++F+ N ++SMY F L A +FD M ER+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 212 VSWNTIISCYASRGTWGEAFKLFERM---QEEGVEMNIIIWNTMAGGYLHAGNFKGALKL 268
V+W T++S Y S G +A +L+ RM +EE M L A G ++L
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAAN------EFMYSAVLKACGLVGDIQL 125
Query: 269 LSQMRTSIHLDHV-AMVVGLNACSHIGALKLGKEIHGH-AVRTGFDVLDNVRNALITMYS 326
+ I +++ VV +N+ + +K G+ I + + + N LI+ Y
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDM-YVKNGRLIEANSSFKEILRPSSTSWNTLISGYC 184
Query: 327 RCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIAS 386
+ G + A LF RM + +++WN ++SGF + FL R M EG + +
Sbjct: 185 KAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVR-MQREGLVLDGFALPC 243
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVF--DSLT 444
L C+ L GK+ HC ++K + + L+DMY+ G ++ A VF + L
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVK-SGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 445 RRDEV-TYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHS-----GL 498
V + +M+ G+ + E + AL + ++ + + D + L C + GL
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGL 362
Query: 499 VAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
V+ DY I+ I + DL G + A ++ R+P K A ++ LI
Sbjct: 363 QVHSLVVVSGYELDY-IVGSI-----LVDLHANVGNIQDAHKLFHRLPNKDIIA-FSGLI 415
Query: 559 GACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
C G L + +L+++ D + +
Sbjct: 416 RGCVKSGFNSLAFYLFRELIKLGLDADQFIV 446
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 35/328 (10%)
Query: 278 LDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYML 337
+D + GL C + A K G+ I H ++ G + N +I+MY L A+ +
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 338 FQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAE-PNYVTIASVLPLCARIAN 396
F M E+ ++TW M+SG+ + ++ L+R+ML E N ++VL C + +
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 397 LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIR 456
+Q G + I K E + ++L N++VDMY ++G+++EA F + R ++ +I
Sbjct: 123 IQLGILVYERIGK-ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLIS 181
Query: 457 GYGMKGEGQMALNIFEEMCKFKIKP------------------------------DHVAM 486
GY G A+ +F M + + D A+
Sbjct: 182 GYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFAL 241
Query: 487 VAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEII--TR 544
L ACS GL+ G+ L +V G+ + + D++ G L A ++ +
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 545 MPYKPTPAMWATLIGACRIHGNTVLGEW 572
+ + A+W +++ I+ W
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAALW 328
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C ++ SL GKQ+H I G++ + LV Y + D+ ++ + + + W
Sbjct: 453 CSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSW 512
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC---GELLDCASGVEVHKA 170
+I F +N EA + KM+ + P++ T+ +L AC G L + S +E K+
Sbjct: 513 TGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKS 572
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP-ERDDVSWNTIISCYASRGTWGE 229
E G + L + +V + + G + A L + MP E D W ++++ + G
Sbjct: 573 -EYGLEPY-LEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGL 630
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAG 260
+ E++ +G + ++ +++ Y G
Sbjct: 631 VTVIAEKLL-KGFPDDPSVYTSLSNAYATLG 660
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 168/591 (28%), Positives = 283/591 (47%), Gaps = 68/591 (11%)
Query: 53 GCINVNSLSPGKQLHAQVISL-GFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL 111
C + L ++L ++ S F NT ++S YA+ +A ++ E +
Sbjct: 114 SCGGIRFLEEARKLFDEMPSRDSFSWNT-----MISGYAKNRRIGEALLLFEKMPERNAV 168
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
W+ +I+ F +N A+ +RKM K P ++K E L A+ V
Sbjct: 169 SWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIK--NERLSEAAWVLGQYGS 226
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPE---------------RDDVSWNT 216
V ++ +N L+ Y + G++E AR LFD +P+ ++ VSWN+
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 217 IISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSI 276
+I Y G A LF++M++ + I WNTM GY+H + A L S+M
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPN-- 340
Query: 277 HLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYM 336
++ H N +++ Y+ G++ A
Sbjct: 341 -----------------------RDAHSW-------------NMMVSGYASVGNVELARH 364
Query: 337 LFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIAN 396
F++ EK ++WN++++ + E LF +M EG +P+ T+ S+L + N
Sbjct: 365 YFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVN 424
Query: 397 LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMI 455
L+ G + H ++K + + N L+ MY+R G+++E++R+FD + +R+ +T+ AMI
Sbjct: 425 LRLGMQMHQIVVK--TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Query: 456 RGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGI 515
GY G ALN+F M I P H+ V+VL AC+H+GLV + + F M+ Y I
Sbjct: 483 GGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKI 542
Query: 516 IPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAG 575
P++EHY+ + ++ G +A IIT MP++P +W L+ ACRI+ N L AA
Sbjct: 543 EPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAE 602
Query: 576 KLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVD 626
+ ++P+ S Y+L+ NMYA G W E ++VR M + +KK G +WVD
Sbjct: 603 AMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 82/334 (24%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N ++ + G + AR +F+ + R+ V+WNT+IS Y R +A KLF+ M +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR--- 100
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
+++ WNTM GY+ G ++ L + R KL E+
Sbjct: 101 -DVVTWNTMISGYVSC----GGIRFLEEAR-----------------------KLFDEMP 132
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
R F N +I+ Y++ +G A +LF++M E+ ++W+AM++GF VD
Sbjct: 133 S---RDSFSW-----NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVD 184
Query: 364 EVSFLFRQMLHEGAEPNYVTIASVLP---------LCARIANLQHGKEFHCYIMK----- 409
LFR+M + + P +A ++ + + +L G+E Y
Sbjct: 185 SAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVG 244
Query: 410 -----------------------------REQFKEYLLLWNTLVDMYARSGKVLEAKRVF 440
RE+F + ++ WN+++ Y + G V+ A+ +F
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 441 DSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
D + RD +++ MI GY + A +F EM
Sbjct: 305 DQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 310 GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLF 369
GF + N +I R G + A +F+++E + +TWN M+SG+ +++ LF
Sbjct: 39 GFRATNKELNQMI----RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLF 94
Query: 370 RQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYAR 429
M + T+ S C I L+ ++ + R+ F WNT++ YA+
Sbjct: 95 DVMPKRDV-VTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFS-----WNTMISGYAK 148
Query: 430 SGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
+ ++ EA +F+ + R+ V+++AMI G+ GE A+ +F +M
Sbjct: 149 NRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 26/225 (11%)
Query: 418 LLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM---ALNIFEEM 474
+ WNT++ Y + ++ +A+++FD + +RD VT+ MI GY G + A +F+EM
Sbjct: 72 VTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEM 131
Query: 475 CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGL 534
D + +++ + + + + +LF++M + + ++ M F + G
Sbjct: 132 P----SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAV-----SWSAMITGFCQNGE 182
Query: 535 LNKAKEIITRMPYK---PTPAMWATLIGACRI-HGNTVLGEWAAGKLLEMKPDHSGYYIL 590
++ A + +MP K P A+ A LI R+ VLG++ G L+ + D Y
Sbjct: 183 VDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQY--GSLVSGREDLVYAYNT 240
Query: 591 IANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFF 635
+ Y G ++ R + P D GGEF F
Sbjct: 241 LIVGYGQRG---QVEAARCLFDQI-----PDLCGDDHGGEFRERF 277
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 257/518 (49%), Gaps = 74/518 (14%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N LV++Y K G A +FD MP RD ++W ++++
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA----------------------- 78
Query: 244 MNIIIWNTMAGGYLHAGNFKG---ALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGK 300
L+ N G ++ + + D + AC+++G++ G+
Sbjct: 79 -------------LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
++H H + + + + V+++L+ MY++CG L A +F + K I+W AM+SG+A
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 361 RVDEVSFLFR-------------------------------QMLHEGAEP-NYVTIASVL 388
R +E LFR +M E + + + ++S++
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 389 PLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDE 448
CA +A G++ H ++ F + + N L+DMYA+ V+ AK +F + RD
Sbjct: 246 GACANLAASIAGRQVHGLVIAL-GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDV 304
Query: 449 VTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQE 508
V++T++I G G+ + AL ++++M +KP+ V V ++ ACSH G V +G+ LFQ
Sbjct: 305 VSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQS 364
Query: 509 MVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTV 568
M DYGI P ++HY C+ DL GR+GLL++A+ +I MP+ P WA L+ AC+ G
Sbjct: 365 MTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQ 424
Query: 569 LGEWAAGKLL-EMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDV 627
+G A L+ K YIL++N+YA+A W +++E R + + V+K PG + V+V
Sbjct: 425 MGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEV 484
Query: 628 GGEFSPFFVGDTSNPHAGEIYPLMDGLNELMK-DAGYI 664
E F+ G+TS+P +I+ L+ L E M+ GY+
Sbjct: 485 RKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYV 522
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 225/463 (48%), Gaps = 11/463 (2%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C +L+ K LHA ++ LG Q + LV+ Y + A V + + + W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+++ + L + LS + + + PD+F + +++KAC L G +VH
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
V V ++LV MYAK G L A+ +FD++ ++ +SW ++S YA G EA +
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIH--LDHVAMVVGLNAC 290
LF + + N+ W + G++ +G A + ++MR LD + + + AC
Sbjct: 193 LFRILPVK----NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+++ A G+++HG + GFD + NALI MY++C D+ A +F RM + +++W
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
+++ G A + ++ L+ M+ G +PN VT ++ C+ + ++ G+E + K
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEGQMALN 469
+ L + L+D+ RSG + EA+ + ++ DE T+ A++ +G GQM +
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 470 IFEEMC---KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
I + + K K ++ + + + S G V++ + EM
Sbjct: 429 IADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 145/320 (45%), Gaps = 50/320 (15%)
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
L C+ L K +H H V+ G + N L+ +Y +CG HA +F M +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 347 ITWNAMLSGFAHMDRVDE-VSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHC 405
I W ++L+ + + +S G P+ ++++ CA + ++ HG++ HC
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 406 YIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYG------ 459
+ + E + ++ ++LVDMYA+ G + AK VFDS+ ++ +++TAM+ GY
Sbjct: 130 HFIVSEYANDEVVK-SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 460 -------------------------MKGEGQMALNIFEEMCKFKIKP-DHVAMVAVLTAC 493
G+G A ++F EM + ++ D + + +++ AC
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 494 SH-SGLVAQGQVLFQEMVDDYGIIPRIEHYAC------MADLFGRAGLLNKAKEIITRMP 546
++ + +A QV +G++ + +C + D++ + + AK+I +RM
Sbjct: 249 ANLAASIAGRQV--------HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300
Query: 547 YKPTPAMWATLIGACRIHGN 566
++ + W +LI HG
Sbjct: 301 HRDVVS-WTSLIVGMAQHGQ 319
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 179/628 (28%), Positives = 299/628 (47%), Gaps = 62/628 (9%)
Query: 53 GCINVNSLSPGKQLHAQVIS--LGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEP 110
C +L G LH ++S + QN I+ L++ YA+ A V ++
Sbjct: 68 ACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNV 127
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK- 169
+ W LI+ +V+ E + ML P+EFT SVL +C G +VH
Sbjct: 128 VSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCRY----EPGKQVHGL 182
Query: 170 AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGE 229
A+++G + S++V NA++SMY + C+ + E
Sbjct: 183 ALKLG-LHCSIYVANAVISMYGR---------------------------CHDGAAAY-E 213
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLN 288
A+ +FE ++ + N++ WN+M + K A+ + +M + + D + LN
Sbjct: 214 AWTVFEAIKFK----NLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATL---LN 266
Query: 289 ACSHI---------GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSR-CGDLGHAYMLF 338
CS + K ++H V++G V ALI +YS D Y LF
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLF 326
Query: 339 QRMEE-KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANL 397
M + ++ WN +++ FA D + LF Q+ E P++ T +SVL CA +
Sbjct: 327 MEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 398 QHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRG 457
+H H ++K F +L N+L+ YA+ G + RVFD + RD V++ +M++
Sbjct: 386 RHALSIHAQVIK-GGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKA 444
Query: 458 YGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
Y + G+ L +F++M I PD +A+L+ACSH+G V +G +F+ M + +P
Sbjct: 445 YSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLP 501
Query: 518 RIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKL 577
++ HYAC+ D+ RA +A+E+I +MP P +W L+G+CR HGNT LG+ AA KL
Sbjct: 502 QLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKL 561
Query: 578 LEM-KPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFV 636
E+ +P +S YI ++N+Y A G ++E M V+K P +W ++G + F
Sbjct: 562 KELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFAS 621
Query: 637 GDTSNPHAGEIYPLMDGLNELMKDAGYI 664
G P +Y + L +K+ GY+
Sbjct: 622 GGRHRPDKEAVYRELKRLISWLKEMGYV 649
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 198/458 (43%), Gaps = 57/458 (12%)
Query: 148 YPSVLKACGELLDCASGVEVHKAIEVGSMGWS--LFVHNALVSMYAKFGKLEVARHLFDN 205
Y ++ +AC E + G+ +H + +S + + N L++MYAK G + AR +FD
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 206 MPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGA 265
MPER+ VSW +I+ Y G E F LF
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLF------------------------------- 150
Query: 266 LKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMY 325
S M + + + L +C + + GK++HG A++ G V NA+I+MY
Sbjct: 151 ----SSMLSHCFPNEFTLSSVLTSCRY----EPGKQVHGLALKLGLHCSIYVANAVISMY 202
Query: 326 SRCGDLGHAY---MLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYV 382
RC D AY +F+ ++ K L+TWN+M++ F + + +F +M +G +
Sbjct: 203 GRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRA 262
Query: 383 TIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT-----LVDMYARS-GKVLEA 436
T+ ++ + ++L + C + + L+ T L+ +Y+ +
Sbjct: 263 TLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDC 322
Query: 437 KRVFDSLTR-RDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSH 495
++F ++ RD V + +I + + + + A+++F ++ + K+ PD +VL AC
Sbjct: 323 YKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKAC-- 379
Query: 496 SGLVAQGQVL-FQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMW 554
+GLV L V G + + + + G L+ + M + + W
Sbjct: 380 AGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS-W 438
Query: 555 ATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIA 592
+++ A +HG V + +++ PD + + L++
Sbjct: 439 NSMLKAYSLHGQ-VDSILPVFQKMDINPDSATFIALLS 475
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 218/407 (53%), Gaps = 39/407 (9%)
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDL------------------------ 331
L LG+ H + G D VR +L+ MYS CGDL
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 332 -------GHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQM-LHEGAE----P 379
A LF M E+ +I+W+ +++G+ + E LFR+M L + E P
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 380 NYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRV 439
N T+++VL C R+ L+ GK H YI K + ++L L+DMYA+ G + AKRV
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKY-HVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 440 FDSL-TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKF-KIKPDHVAMVAVLTACSHSG 497
F++L +++D Y+AMI M G +F EM I P+ V V +L AC H G
Sbjct: 257 FNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRG 316
Query: 498 LVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATL 557
L+ +G+ F+ M++++GI P I+HY CM DL+GR+GL+ +A+ I MP +P +W +L
Sbjct: 317 LINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSL 376
Query: 558 IGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVK 617
+ R+ G+ E A +L+E+ P +SG Y+L++N+YA G W E+ +R M G+
Sbjct: 377 LSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGIN 436
Query: 618 KAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
K PGC++V+V G F VGD S + IY ++D + + +++AGY+
Sbjct: 437 KVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYV 483
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 177/368 (48%), Gaps = 16/368 (4%)
Query: 108 LEPLHWNMLISMFVRNELFVE---ALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASG 164
LE WN++I V N + +S Y +M +V PD T+P +L + L G
Sbjct: 22 LESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLG 81
Query: 165 VEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASR 224
H I + + FV +L++MY+ G L A+ +FD+ +D +WN++++ YA
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 225 GTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS------IHL 278
G +A KLF+ M E N+I W+ + GY+ G +K AL L +M+ +
Sbjct: 142 GLIDDARKLFDEMPER----NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 279 DHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLF 338
+ M L+AC +GAL+ GK +H + + ++ + ALI MY++CG L A +F
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 339 QRM-EEKGLITWNAMLSGFAHMDRVDEVSFLFRQM-LHEGAEPNYVTIASVLPLCARIAN 396
+ +K + ++AM+ A DE LF +M + PN VT +L C
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 397 LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEV-TYTAMI 455
+ GK + +++ + + +VD+Y RSG + EA+ S+ +V + +++
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 456 RGYGMKGE 463
G M G+
Sbjct: 378 SGSRMLGD 385
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 141/338 (41%), Gaps = 78/338 (23%)
Query: 60 LSPGKQLHAQVISLGFDQNTIM----------------------------LP---RLVSF 88
L G++ HAQ++ G D++ + LP +V+
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 89 YARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQ-----VIP 143
YA+ L DDA + + + W+ LI+ +V + EAL +R+M + V P
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 144 DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLF 203
+EFT +VL ACG L G VH I+ + + + AL+ MYAK G LE A+ +F
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 204 DNMPERDDV-SWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNF 262
+ + + DV +++ +I C A G E F+LF
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLF---------------------------- 289
Query: 263 KGALKLLSQMRTS--IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRN- 319
S+M TS I+ + V V L AC H G + GK + F + ++++
Sbjct: 290 -------SEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE-FGITPSIQHY 341
Query: 320 -ALITMYSRCGDLGHAYMLFQRME-EKGLITWNAMLSG 355
++ +Y R G + A M E ++ W ++LSG
Sbjct: 342 GCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 215/391 (54%), Gaps = 3/391 (0%)
Query: 270 SQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCG 329
S R D + + +C + G H A++ GF + ++L+ +Y G
Sbjct: 110 SVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSG 169
Query: 330 DLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP 389
++ +AY +F+ M E+ +++W AM+SGFA RVD L+ +M ++PN T ++L
Sbjct: 170 EVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLS 229
Query: 390 LCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEV 449
C L G+ HC + K YL + N+L+ MY + G + +A R+FD + +D V
Sbjct: 230 ACTGSGALGQGRSVHCQTLHM-GLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 450 TYTAMIRGYGMKGEGQMALNIFEEMC-KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQE 508
++ +MI GY G A+ +FE M K KPD + + VL++C H+GLV +G+ F
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 509 MVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTV 568
M + +G+ P + HY+C+ DL GR GLL +A E+I MP KP +W +L+ +CR+HG+
Sbjct: 349 MAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVW 407
Query: 569 LGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVG 628
G AA + L ++PD + ++ +AN+YA+ G W E A VR M++ G+K PGC+W+++
Sbjct: 408 TGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Query: 629 GEFSPFFVGDTSNPHAGEIYPLMDGLNELMK 659
F D SN EI ++ L + M+
Sbjct: 468 NYVFMFKAEDGSNCRMLEIVHVLHCLIDHME 498
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 161/345 (46%), Gaps = 41/345 (11%)
Query: 144 DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLF 203
D + S +++CG D +G H G +++ ++LV +Y G++E A +F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 204 DNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFK 263
+ MPER+ VSW +IS +A QE V++
Sbjct: 179 EEMPERNVVSWTAMISGFA---------------QEWRVDI------------------- 204
Query: 264 GALKLLSQMRTSI-HLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALI 322
LKL S+MR S + L+AC+ GAL G+ +H + G ++ N+LI
Sbjct: 205 -CLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLI 263
Query: 323 TMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQML-HEGAEPNY 381
+MY +CGDL A+ +F + K +++WN+M++G+A + LF M+ G +P+
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDA 323
Query: 382 VTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFD 441
+T VL C ++ G++F +M K L ++ LVD+ R G + EA + +
Sbjct: 324 ITYLGVLSSCRHAGLVKEGRKFF-NLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIE 382
Query: 442 SLTRR-DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA 485
++ + + V + +++ + G+ + EE + ++PD A
Sbjct: 383 NMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE--RLMLEPDCAA 425
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 8/231 (3%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G H + GF + + LV Y ++A V E + W +IS F +
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
L Y KM + P+++T+ ++L AC G VH + MG ++
Sbjct: 199 EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVH--CQTLHMGLKSYL 256
Query: 183 H--NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE-RMQE 239
H N+L+SMY K G L+ A +FD +D VSWN++I+ YA G +A +LFE M +
Sbjct: 257 HISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPK 316
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALK---LLSQMRTSIHLDHVAMVVGL 287
G + + I + + HAG K K L+++ L+H + +V L
Sbjct: 317 SGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDL 367
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C +L G+ +H Q + +G + L+S Y + DA + + S+ + +
Sbjct: 230 ACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS 289
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQ-VIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN +I+ + ++ L ++A+ + M+ K PD TY VL +C G + +
Sbjct: 290 WNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM 349
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER-DDVSWNTII-SC--------- 220
+ L ++ LV + +FG L+ A L +NMP + + V W +++ SC
Sbjct: 350 AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTG 409
Query: 221 ------------------------YASRGTWGEAFKLFERMQEEGVEMN 245
YAS G W EA + + M+++G++ N
Sbjct: 410 IRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTN 458
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 247/478 (51%), Gaps = 26/478 (5%)
Query: 192 KFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW--GEAFKLFERMQEEGVEM-NIII 248
+ L AR +FD + + +++ Y+S AF F M V N I
Sbjct: 69 RLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFI 128
Query: 249 WNTM--AGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNA-CSHIGALKLGKEIHGH 305
+ + + YL + F L ++ HL V L++ S + + L +++
Sbjct: 129 YPLVLKSTPYLSSA-FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQL--- 184
Query: 306 AVRTGFDVLDNVRN-----ALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
FD + RN A+++ Y+R GD+ +A LF+ M E+ + +WNA+L+
Sbjct: 185 -----FDEMSE-RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNG 238
Query: 361 RVDEVSFLFRQMLHEGA-EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
E LFR+M++E + PN VT+ VL CA+ LQ K H + +R+ + + +
Sbjct: 239 LFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSD-VFV 297
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKI 479
N+LVD+Y + G + EA VF +++ + +MI + + G + A+ +FEEM K I
Sbjct: 298 SNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNI 357
Query: 480 ---KPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLN 536
KPDH+ + +L AC+H GLV++G+ F M + +GI PRIEHY C+ DL GRAG +
Sbjct: 358 NDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFD 417
Query: 537 KAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYA 596
+A E+++ M K A+W +L+ AC+IHG+ L E A L+ + P++ GY ++AN+Y
Sbjct: 418 EALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYG 477
Query: 597 AAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGL 654
G W E R +++ K PG + +++ E F+ D S+P EIY ++D L
Sbjct: 478 EMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 195/430 (45%), Gaps = 45/430 (10%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSF---------YARFNLFDD---------ACIVTESS 105
KQ+ + +I G + + +L+ F YARF +FD A ++T S
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARF-IFDRFSFPNTHLYAAVLTAYS 99
Query: 106 SSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASG 164
SSL PLH + A S +R M+ + V P+ F YP VLK+ L S
Sbjct: 100 SSL-PLHAS-------------SAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFST 145
Query: 165 VEVHKAIEVGSMGWSLFVHNALVSMYAK-FGKLEVARHLFDNMPERDDVSWNTIISCYAS 223
VH + + V AL+ YA + +AR LFD M ER+ VSW ++S YA
Sbjct: 146 PLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYAR 205
Query: 224 RGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM--RTSIHLDHV 281
G A LFE M E V WN + G F A+ L +M SI + V
Sbjct: 206 SGDISNAVALFEDMPERDVPS----WNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEV 261
Query: 282 AMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRM 341
+V L+AC+ G L+L K IH A R V N+L+ +Y +CG+L A +F+
Sbjct: 262 TVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA 321
Query: 342 EEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLH---EGAEPNYVTIASVLPLCARIANLQ 398
+K L WN+M++ FA R +E +F +M+ +P+++T +L C +
Sbjct: 322 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVS 381
Query: 399 HGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRG 457
G+ + + R + + + L+D+ R+G+ EA V ++ + DE + +++
Sbjct: 382 KGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
Query: 458 YGMKGEGQMA 467
+ G +A
Sbjct: 442 CKIHGHLDLA 451
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 157/380 (41%), Gaps = 74/380 (19%)
Query: 255 GYLHAGNFKGALKLLSQMRTSI-----HLDHVAMVVGLNACSHIGALKLGKEIHGHAVRT 309
YLHA + A +LL+Q +++ HL+H+ V S + H H
Sbjct: 9 SYLHAPSSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLS--------HSH---- 56
Query: 310 GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAH---MDRVDEVS 366
F +R + R +L +A +F R + A+L+ ++ + S
Sbjct: 57 -FLCFKLLRFCTL----RLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFS 111
Query: 367 FLFRQMLHEGA-EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVD 425
F FR M++ PN+ VL +++ H ++ K F Y+++ L+
Sbjct: 112 F-FRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFK-SGFHLYVVVQTALLH 169
Query: 426 MYARS-GKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHV 484
YA S + A+++FD ++ R+ V++TAM+ GY G+ A+ +FE+M + D
Sbjct: 170 SYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP----ERDVP 225
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYAC-------------------- 524
+ A+L AC+ +GL + LF+ M+++ I P C
Sbjct: 226 SWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAF 285
Query: 525 ---------------MADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNT-- 567
+ DL+G+ G L +A + +M K + W ++I +HG +
Sbjct: 286 AYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF-KMASKKSLTAWNSMINCFALHGRSEE 344
Query: 568 ---VLGEWAAGKLLEMKPDH 584
V E + ++KPDH
Sbjct: 345 AIAVFEEMMKLNINDIKPDH 364
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 252 bits (643), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 145/477 (30%), Positives = 248/477 (51%), Gaps = 41/477 (8%)
Query: 221 YASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDH 280
YAS G + LF + + + + NT + L F ++LLS + I+ +
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS---SEINPNE 130
Query: 281 VAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQR 340
L +CS K GK IH H ++ G + V L+ +Y++ GD+ A +F R
Sbjct: 131 FTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDR 186
Query: 341 MEEKGLIT-------------------------------WNAMLSGFAHMDRVDEVSFLF 369
M E+ L++ WN M+ G+A ++ LF
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 370 RQMLHEG-AEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYA 428
+++L EG +P+ +T+ + L C++I L+ G+ H ++ K + + + + L+DMY+
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFV-KSSRIRLNVKVCTGLIDMYS 305
Query: 429 RSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFK-IKPDHVAMV 487
+ G + EA VF+ R+D V + AMI GY M G Q AL +F EM ++P + +
Sbjct: 306 KCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFI 365
Query: 488 AVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY 547
L AC+H+GLV +G +F+ M +YGI P+IEHY C+ L GRAG L +A E I M
Sbjct: 366 GTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNM 425
Query: 548 KPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEV 607
+W++++G+C++HG+ VLG+ A L+ + +SG Y+L++N+YA+ G + +A+V
Sbjct: 426 DADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKV 485
Query: 608 RTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
R M+ G+ K PG + +++ + F GD + + EIY ++ ++E +K GY+
Sbjct: 486 RNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYV 542
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 18/365 (4%)
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
N L +A Y ++L ++ P+EFT+ S+LK+C SG +H + +G +V
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYV 163
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
LV +YAK G + A+ +FD MPER VS +I+CYA +G A LF+ M
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM----C 219
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQM--RTSIHLDHVAMVVGLNACSHIGALKLGK 300
E +I+ WN M GY G AL L ++ D + +V L+ACS IGAL+ G+
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMD 360
IH + + V LI MYS+CG L A ++F K ++ WNAM++G+A
Sbjct: 280 WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Query: 361 RVDEVSFLFRQMLH-EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
+ LF +M G +P +T L CA + G + + K +
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEH 399
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTR----RDEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
+ LV + R+G++ KR ++++ D V +++++ + G+ + I E +
Sbjct: 400 YGCLVSLLGRAGQL---KRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI 456
Query: 476 KFKIK 480
IK
Sbjct: 457 GLNIK 461
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 43/302 (14%)
Query: 85 LVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRK-QVIP 143
+++ YA+ + A + +S + + WN++I + ++ +AL ++K+L + + P
Sbjct: 198 MITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKP 257
Query: 144 DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLF 203
DE T + L AC ++ +G +H ++ + ++ V L+ MY+K G LE A +F
Sbjct: 258 DEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVF 317
Query: 204 DNMPERDDVSWNTIISCYASRGTWGEAFKLFERM-------------------------- 237
++ P +D V+WN +I+ YA G +A +LF M
Sbjct: 318 NDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLV 377
Query: 238 -----------QEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVG 286
QE G++ I + + AG K A + + M ++ D V
Sbjct: 378 NEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNM--NMDADSVLWSSV 435
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALIT-MYSRCGDLGHAYMLFQRMEEKG 345
L +C G LGKEI + + G ++ ++ L++ +Y+ GD + M+EKG
Sbjct: 436 LGSCKLHGDFVLGKEIAEYLI--GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKG 493
Query: 346 LI 347
++
Sbjct: 494 IV 495
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/586 (27%), Positives = 279/586 (47%), Gaps = 53/586 (9%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNM 115
+++ LS KQ H ++ G + + +L+ Y + FDDA + + + WN+
Sbjct: 48 SLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNI 107
Query: 116 LISMFVRNELFVE-----ALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
LI ++ + ++L V D ++ +++ C + + +G+++H
Sbjct: 108 LIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCL 167
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ + S F +LV Y K G + AR +F+ + +RD
Sbjct: 168 MVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD-------------------- 207
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFK---GALKLLSQMRTSIHLDHVAMVVGL 287
+++WN + Y+ G G LKL+ + D+ L
Sbjct: 208 ---------------LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLL 252
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
+AC ++ GK+IH + + V AL+ MY++ L A F+ M + ++
Sbjct: 253 SACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVV 308
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
+WNAM+ GFA E LF QML E +P+ +T ASVL CA+ + + K+ +
Sbjct: 309 SWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
K+ ++L + N+L+ Y+R+G + EA F S+ D V++T++I G + +
Sbjct: 369 TKKGS-ADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEES 427
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMAD 527
L +FE M + K++PD + + VL+ACSH GLV +G F+ M + Y I EHY C+ D
Sbjct: 428 LQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLID 486
Query: 528 LFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGY 587
L GRAG +++A +++ MP +P+ A G C IH +W A KLLE++P
Sbjct: 487 LLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVN 546
Query: 588 YILIANMYAAAGCWSELAEVRTY-MRNLGVKKAPGCAWVDVGGEFS 632
Y +++N Y + G W++ A +R RN K PGC+W+ G++S
Sbjct: 547 YSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL---GDYS 589
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 176/397 (44%), Gaps = 51/397 (12%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + ++ G QLH ++ G + + LV FY + L +A V E+ + + W
Sbjct: 152 CTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLW 211
Query: 114 NMLISMFVRNELFVEALSAYRKM--LRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
N L+S +V N + EA + M + + D FT+ S+L AC G ++H +
Sbjct: 212 NALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAIL 267
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
S + + V AL++MYAK L AR F++M R+ VSWN +I +A G EA
Sbjct: 268 FKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAM 327
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
+LF +M E ++ D + L++C+
Sbjct: 328 RLFGQMLLENLQP----------------------------------DELTFASVLSSCA 353
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
A+ K++ + G +V N+LI+ YSR G+L A + F + E L++W +
Sbjct: 354 KFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTS 413
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
++ A +E +F ML + +P+ +T VL C+ +Q G C+ E
Sbjct: 414 VIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEG--LRCFKRMTE 470
Query: 412 QFK-----EYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
+K E+ + L+D+ R+G + EA V +S+
Sbjct: 471 FYKIEAEDEH---YTCLIDLLGRAGFIDEASDVLNSM 504
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 232/458 (50%), Gaps = 43/458 (9%)
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMR----TSIHLDHVAMVVGLNACSHIGALKLGK 300
N +W + GY G F A+ + MR T + A+ L AC + L LG+
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSAL---LKACGTMKDLNLGR 169
Query: 301 EIHGHAVR-TGF----------------DVLDNVRNA--------------LITMYSRCG 329
+ H R GF + +D R LI Y+R G
Sbjct: 170 QFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVG 229
Query: 330 DLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP 389
++ A LF+ + K ++ W AM++GFA + E F +M G + VT+A +
Sbjct: 230 NMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYIS 289
Query: 390 LCARIANLQHGKEFHCYIMKREQFK--EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD 447
CA++ ++ I ++ + +++++ + L+DMY++ G V EA VF S+ ++
Sbjct: 290 ACAQLGASKYADR-AVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKN 348
Query: 448 EVTYTAMIRGYGMKGEGQMALNIFEEM-CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLF 506
TY++MI G G Q AL++F M + +IKP+ V V L ACSHSGLV QG+ +F
Sbjct: 349 VFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVF 408
Query: 507 QEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGN 566
M +G+ P +HY CM DL GR G L +A E+I M +P +W L+GACRIH N
Sbjct: 409 DSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNN 468
Query: 567 TVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAW-V 625
+ E AA L E++PD G YIL++N+YA+AG W + VR ++ G+KK P +W V
Sbjct: 469 PEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVV 528
Query: 626 DVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
D G+ FF G+ ++P + +I ++ L E + GY
Sbjct: 529 DKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGY 566
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 195/397 (49%), Gaps = 13/397 (3%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDD--ACIVTESSSSLEPL 111
CIN+N + KQ+H V+ G DQ+ +L +L+ + + D A V E P
Sbjct: 59 CINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
W +I + F EA++ Y M ++++ P FT+ ++LKACG + D G + H
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
++V N ++ MY K ++ AR +FD MPERD +SW +I+ YA G A
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNAC 290
+LFE + + +++ W M G+ + AL+ +M S I D V + ++AC
Sbjct: 236 ELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
+ +GA K A ++G+ D+V +ALI MYS+CG++ A +F M K + T
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFT 351
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGA-EPNYVTIASVLPLCARIANLQHGKEFHCYI 407
+++M+ G A R E LF M+ + +PN VT L C+ + G++ +
Sbjct: 352 YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT 444
+ + + +VD+ R+G++ EA + +++
Sbjct: 412 YQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 448
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 41/319 (12%)
Query: 282 AMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYM--LFQ 339
+++ L+ C ++ +K +IHGH +R G D + LI ++ G Y + +
Sbjct: 51 SLISKLDDCINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 340 RMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQH 399
++ + W A++ G+A + DE ++ M E P T +++L C + +L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 400 GKEFH---------CYI-----------------MKREQFKEY----LLLWNTLVDMYAR 429
G++FH C++ R+ F E ++ W L+ YAR
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 430 SGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAV 489
G + A +F+SL +D V +TAM+ G+ + Q AL F+ M K I+ D V +
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 490 LTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHY---ACMADLFGRAGLLNKAKEIITRMP 546
++AC+ G Q + G P +H + + D++ + G + +A + M
Sbjct: 288 ISACAQLGASKYADRAVQ-IAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345
Query: 547 YKPTPAMWATLIGACRIHG 565
K ++++I HG
Sbjct: 346 NKNV-FTYSSMILGLATHG 363
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 223/470 (47%), Gaps = 43/470 (9%)
Query: 186 LVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
L M G + A +F M E++ V W ++I+ Y A + F+ E +
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPER----D 89
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGH 305
I++WNTM GY+ GN A L QM C + +
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQM----------------PCRDVMSW--------- 124
Query: 306 AVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEV 365
N ++ Y+ GD+ +F M E+ + +WN ++ G+A RV EV
Sbjct: 125 -------------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEV 171
Query: 366 SFLFRQMLHEGAE-PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLV 424
F++M+ EG+ PN T+ VL CA++ GK H Y K + + N L+
Sbjct: 172 LGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALI 231
Query: 425 DMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHV 484
DMY + G + A VF + RRD +++ MI G G G ALN+F EM I PD V
Sbjct: 232 DMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKV 291
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
V VL AC H GLV G F M D+ I+P IEH C+ DL RAG L +A E I +
Sbjct: 292 TFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINK 351
Query: 545 MPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSEL 604
MP K +WATL+GA +++ +GE A +L++++P + +++++N+Y AG + +
Sbjct: 352 MPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDA 411
Query: 605 AEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGL 654
A ++ MR+ G KK G +W++ F+ +P E+ ++ L
Sbjct: 412 ARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 145/313 (46%), Gaps = 43/313 (13%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N ++ YA G +E +FD+MPER+ SWN +I YA G E F+RM +EG
Sbjct: 125 NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG-- 182
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
S+ + M + L+AC+ +GA GK +H
Sbjct: 183 -------------------------------SVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 304 GHAVRTGFDVLD-NVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
+ G++ +D NV+NALI MY +CG + A +F+ ++ + LI+WN M++G A
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
E LF +M + G P+ VT VL C + ++ G + + +
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 423 LVDMYARSGKVLEAKRVFDSL-TRRDEVTYTAMI---RGYGMKGEGQMALNIFEEMCKFK 478
+VD+ +R+G + +A + + + D V + ++ + Y G++AL EE+ K
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVAL---EEL--IK 386
Query: 479 IKPDHVAMVAVLT 491
++P + A +L+
Sbjct: 387 LEPRNPANFVMLS 399
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 42/282 (14%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRK-QVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
WN LI + +N E L ++++M+ + V+P++ T VL AC +L G VHK
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 172 E-VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
E +G + V NAL+ MY K G +E+A +F + RD +SWNT+I+ A+ G EA
Sbjct: 215 ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEA 274
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
LF M+ G I D V V L AC
Sbjct: 275 LNLFHEMKNSG----------------------------------ISPDKVTFVGVLCAC 300
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRN--ALITMYSRCGDLGHAYMLFQRMEEKG-LI 347
H+G ++ G + +++ T F ++ + + ++ + SR G L A +M K +
Sbjct: 301 KHMGLVEDGLA-YFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAV 359
Query: 348 TWNAMLSGFAHMDRVD--EVSFLFRQMLHEGAEPNYVTIASV 387
W +L +VD EV+ L N+V ++++
Sbjct: 360 IWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNI 401
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 252/484 (52%), Gaps = 39/484 (8%)
Query: 163 SGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYA 222
+G ++H I L + L+ ++ K G L AR +FD +P+ ++N +IS Y
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 223 SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGY-----LHAGNFKGALKLLSQ------ 271
G E L +RM G + A GY L A N +G+ +L +
Sbjct: 112 KHGLVKELLLLVQRMSYSGEK---------ADGYTLSMVLKASNSRGSTMILPRSLCRLV 162
Query: 272 ----MRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR----NALIT 323
++ + LD V + ++ G L+ + RT F+ + + ++I+
Sbjct: 163 HARIIKCDVELDDVLITALVDTYVKSGKLE--------SARTVFETMKDENVVCCTSMIS 214
Query: 324 MYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSF-LFRQMLHEGAEPNYV 382
Y G + A +F + K ++ +NAM+ GF+ + S ++ M G PN
Sbjct: 215 GYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIS 274
Query: 383 TIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDS 442
T ASV+ C+ + + + G++ H IMK + ++ + ++L+DMYA+ G + +A+RVFD
Sbjct: 275 TFASVIGACSVLTSHEVGQQVHAQIMKSGVYT-HIKMGSSLLDMYAKCGGINDARRVFDQ 333
Query: 443 LTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQG 502
+ ++ ++T+MI GYG G + AL +F M +F+I+P++V + L+ACSHSGLV +G
Sbjct: 334 MQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKG 393
Query: 503 QVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACR 562
+F+ M DY + P++EHYAC+ DL GRAG LNKA E MP +P +WA L+ +C
Sbjct: 394 YEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCN 453
Query: 563 IHGNTVLGEWAAGKLLEMKPD-HSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPG 621
+HGN L AA +L ++ D G Y+ ++N+YA+ W ++++R M+ + K G
Sbjct: 454 LHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIG 513
Query: 622 CAWV 625
+W
Sbjct: 514 RSWT 517
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 210/444 (47%), Gaps = 32/444 (7%)
Query: 57 VNSLSP--GKQLHAQVISLGFDQNTIMLPRLVSF--------YARFNLFDDACIVTESSS 106
+NS +P GK++HA +I GF + + +L+ YAR +FD+ T S+
Sbjct: 45 INSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYAR-QVFDELPKPTLSA- 102
Query: 107 SLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGE-----LLDC 161
+N +IS ++++ L E L ++M D +T VLKA +L
Sbjct: 103 ------YNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPR 156
Query: 162 ASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCY 221
+ VH I + + ALV Y K GKLE AR +F+ M + + V ++IS Y
Sbjct: 157 SLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGY 216
Query: 222 ASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNF-KGALKL-LSQMRTSIHLD 279
++G +A ++F + + +I+++N M G+ +G K ++ + +S R H +
Sbjct: 217 MNQGFVEDAEEIFNTTKVK----DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPN 272
Query: 280 HVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQ 339
+ ACS + + ++G+++H +++G + ++L+ MY++CG + A +F
Sbjct: 273 ISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFD 332
Query: 340 RMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQH 399
+M+EK + +W +M+ G+ +E LF +M EPNYVT L C+ +
Sbjct: 333 QMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDK 392
Query: 400 GKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR-DEVTYTAMIRGY 458
G E + + K + + +VD+ R+G + +A ++ R D + A++
Sbjct: 393 GYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSC 452
Query: 459 GMKGEGQMALNIFEEMCKFKIKPD 482
+ G ++A E+ FK+ D
Sbjct: 453 NLHGNVELASIAASEL--FKLNAD 474
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 138/314 (43%), Gaps = 50/314 (15%)
Query: 295 ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLS 354
A K GK+IH ++TGF N+ L+ ++ +CG L +A +F + + L +N M+S
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP----------LCARIANLQHGKEFH 404
G+ V E+ L ++M + G + + T++ VL L + L H +
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 405 CYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTR------------------- 445
C + + +L LVD Y +SGK+ A+ VF+++
Sbjct: 169 CDVELDD------VLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFV 222
Query: 446 ------------RDEVTYTAMIRGYGMKGE-GQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
+D V Y AM+ G+ GE + +++++ M + P+ +V+ A
Sbjct: 223 EDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGA 282
Query: 493 CSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPA 552
CS GQ + +++ G+ I+ + + D++ + G +N A+ + +M K +
Sbjct: 283 CSVLTSHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 553 MWATLIGACRIHGN 566
W ++I +GN
Sbjct: 342 -WTSMIDGYGKNGN 354
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 2/169 (1%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + S G+Q+HAQ++ G + M L+ YA+ +DA V +
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W +I + +N EAL + +M ++ P+ T+ L AC G E+ ++++
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
Query: 173 VG-SMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVS-WNTIIS 219
SM + + +V + + G L A MPER D W ++S
Sbjct: 402 RDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLS 450
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 287/617 (46%), Gaps = 86/617 (13%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDD---ACIVTESSSSLEP 110
C N+ +L+ Q+H I G D ++ +L+ + ++ D A + +
Sbjct: 15 CKNLRALT---QIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCFPEPDA 70
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQ-VIPDEFTYPSVLKACGELLDCASGVEVH- 168
+N L+ + ++ +++ + +M+RK V PD F++ V+KA +G ++H
Sbjct: 71 FMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHC 130
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+A++ G + HLF T+I Y G
Sbjct: 131 QALKHG-----------------------LESHLFVG---------TTLIGMYGGCGCVE 158
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN 288
A K+F+ M + N++ WN + + GA ++ +M H M+ G
Sbjct: 159 FARKVFDEMHQP----NLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAG-- 212
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
Y + G+L A +F M + ++
Sbjct: 213 ------------------------------------YIKAGELESAKRIFSEMPHRDDVS 236
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
W+ M+ G AH +E FR++ G PN V++ VL C++ + + GK H ++
Sbjct: 237 WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV- 295
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEGQMA 467
++ + + + N L+DMY+R G V A+ VF+ + +R V++T+MI G M G+G+ A
Sbjct: 296 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMAD 527
+ +F EM + + PD ++ +++L ACSH+GL+ +G+ F EM Y I P IEHY CM D
Sbjct: 356 VRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 528 LFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGY 587
L+GR+G L KA + I +MP PT +W TL+GAC HGN L E +L E+ P++SG
Sbjct: 416 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 475
Query: 588 YILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEI 647
+L++N YA AG W ++A +R M +KK + V+VG F G+ E
Sbjct: 476 LVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEA 535
Query: 648 YPLMDGLNELMKD-AGY 663
+ + + +KD AGY
Sbjct: 536 HEKLKEIILRLKDEAGY 552
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 235/453 (51%), Gaps = 38/453 (8%)
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVG 286
G A+ +F ++Q N+ ++N + + A +QM ++ I D++
Sbjct: 68 GYAYGIFSQIQNP----NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFL 123
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLG-------------- 332
+ A S + + +G++ H VR GF V N+L+ MY+ CG +
Sbjct: 124 IKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDV 183
Query: 333 -----------------HAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHE 375
+A +F M + L TW+ M++G+A + ++ LF M E
Sbjct: 184 VSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 376 GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLE 435
G N + SV+ CA + L+ G+ + Y++K L+L LVDM+ R G + +
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVK-SHMTVNLILGTALVDMFWRCGDIEK 302
Query: 436 AKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSH 495
A VF+ L D ++++++I+G + G A++ F +M P V AVL+ACSH
Sbjct: 303 AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSH 362
Query: 496 SGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWA 555
GLV +G +++ M D+GI PR+EHY C+ D+ GRAG L +A+ I +M KP +
Sbjct: 363 GGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILG 422
Query: 556 TLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLG 615
L+GAC+I+ NT + E L+++KP+HSGYY+L++N+YA AG W ++ +R M+
Sbjct: 423 ALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKL 482
Query: 616 VKKAPGCAWVDVGGEFSPFFVG-DTSNPHAGEI 647
VKK PG + +++ G+ + F +G D +P G+I
Sbjct: 483 VKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKI 515
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 162/326 (49%), Gaps = 5/326 (1%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N+LI F +A Y +ML+ ++ PD T+P ++KA E+ G + H I
Sbjct: 85 FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIV 144
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
++V N+LV MYA G + A +F M RD VSW ++++ Y G A +
Sbjct: 145 RFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENARE 204
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACS 291
+F+ M N+ W+ M GY F+ A+ L M R + + MV +++C+
Sbjct: 205 MFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCA 260
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
H+GAL+ G+ + + V++ V + AL+ M+ RCGD+ A +F+ + E ++W++
Sbjct: 261 HLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSS 320
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
++ G A + F QM+ G P VT +VL C+ ++ G E + + K
Sbjct: 321 IIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDH 380
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAK 437
+ L + +VDM R+GK+ EA+
Sbjct: 381 GIEPRLEHYGCIVDMLGRAGKLAEAE 406
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 91/413 (22%)
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGD----------LGHAYM 336
L +CS LK+ IHG +RT V + L+ + C D LG+AY
Sbjct: 19 LQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLAL---CVDDSTFNKPTNLLGYAYG 72
Query: 337 LFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIAN 396
+F +++ L +N ++ F+ + + QML P+ +T ++ + +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 397 LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIR 456
+ G++ H I+ R F+ + + N+LV MYA G + A R+F + RD V++T+M+
Sbjct: 133 VLVGEQTHSQIV-RFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 457 GY---GMKGEG----------------------------QMALNIFEEMCKFKIKPDHVA 485
GY GM + A+++FE M + + +
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 486 MVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
MV+V+++C+H G + G+ ++ +V + + I A + D+F R G + KA + +
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA-LVDMFWRCGDIEKAIHVFEGL 310
Query: 546 PYKPTPAMWATLIGACRIHG------------------------NTVLGEWAAGKLLE-- 579
P + + W+++I +HG VL + G L+E
Sbjct: 311 PETDSLS-WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369
Query: 580 ------MKPDHS-----GYYILIANMYAAAGCWSELAEVRTYMRNLGVK-KAP 620
MK DH +Y I +M AG +LAE ++ + VK AP
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAG---KLAEAENFILKMHVKPNAP 419
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 35/260 (13%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNL------------FDDA------------ 98
G+Q H+Q++ GF + + LV YA F D
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 99 CIVTESSSSL--EPLH-----WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSV 151
C + E++ + E H W+++I+ + +N F +A+ + M R+ V+ +E SV
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 152 LKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDD 211
+ +C L G ++ + M +L + ALV M+ + G +E A H+F+ +PE D
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 212 VSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQ 271
+SW++II A G +A F +M G + + + H G + L++
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 272 MRTS----IHLDHVAMVVGL 287
M+ L+H +V +
Sbjct: 376 MKKDHGIEPRLEHYGCIVDM 395
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 205/379 (54%), Gaps = 2/379 (0%)
Query: 248 IWNTMAGGYL-HAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHA 306
+WN + Y+ H L +R+++ D ++ + + A I LGKE+H A
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 307 VRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVS 366
VR GF + + IT+Y + G+ +A +F E+ L +WNA++ G H R +E
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 367 FLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH-CYIMKREQFKEYLLLWNTLVD 425
+F M G EP+ T+ SV C + +L + H C + + + K +++ N+L+D
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 426 MYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA 485
MY + G++ A +F+ + +R+ V++++MI GY G AL F +M +F ++P+ +
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 486 MVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
V VL+AC H GLV +G+ F M ++ + P + HY C+ DL R G L +AK+++ M
Sbjct: 324 FVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 546 PYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELA 605
P KP +W L+G C G+ + EW A ++E++P + G Y+++AN+YA G W ++
Sbjct: 384 PMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVE 443
Query: 606 EVRTYMRNLGVKKAPGCAW 624
VR M+ V K P ++
Sbjct: 444 RVRKLMKTKKVAKIPAYSY 462
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 170/359 (47%), Gaps = 39/359 (10%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AI 171
WN ++ ++R+E ++A+ Y M+R V+PD ++ P V+KA ++ D G E+H A+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+G +G F + +++Y K G+ E AR +FD PER SWN II G EA
Sbjct: 145 RLGFVG-DEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
++F M+ G+E D MV +C
Sbjct: 204 EMFVDMKRSGLEP----------------------------------DDFTMVSVTASCG 229
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
+G L L ++H ++ + ++ N+LI MY +CG + A +F+ M ++ +++W
Sbjct: 230 GLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSW 289
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
++M+ G+A E FRQM G PN +T VL C ++ GK + +
Sbjct: 290 SSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKS 349
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEV-TYTAMIRGYGMKGEGQMA 467
+ + L + +VD+ +R G++ EAK+V + + + V + ++ G G+ +MA
Sbjct: 350 EFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 8/254 (3%)
Query: 55 INVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWN 114
+ ++ + GK+LH+ + LGF + ++ Y + F++A V + + + WN
Sbjct: 128 VQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWN 187
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVG 174
+I EA+ + M R + PD+FT SV +CG L D + ++HK +
Sbjct: 188 AIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQA 247
Query: 175 SM--GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ + N+L+ MY K G++++A H+F+ M +R+ VSW+++I YA+ G EA +
Sbjct: 248 KTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALE 307
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLD----HVAMVVGLN 288
F +M+E GV N I + + +H G + + M++ L+ H +V L
Sbjct: 308 CFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDL- 366
Query: 289 ACSHIGALKLGKEI 302
S G LK K++
Sbjct: 367 -LSRDGQLKEAKKV 379
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/608 (27%), Positives = 283/608 (46%), Gaps = 80/608 (13%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C + + G+ LHAQV+ GF + LVS Y + DA V +
Sbjct: 41 CAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASV 100
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +S + N +A + + T SVL CG D G+++H
Sbjct: 101 NAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMK 157
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
++V +LVSMY++ G+ W A ++
Sbjct: 158 SGFEMEVYVGTSLVSMYSRCGE-------------------------------WVLAARM 186
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR--TSIHLDHVAMVVGLNACS 291
FE++ + V + +N G + G + + MR +S + V V + AC+
Sbjct: 187 FEKVPHKSV----VTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYM--------------- 336
+ L+ G+++HG ++ F V ALI MYS+C AY+
Sbjct: 243 SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWN 302
Query: 337 -----------------LFQRMEEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHE 375
LF++++ +GL TWN+++SGF+ + +V E F +ML
Sbjct: 303 SVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV 362
Query: 376 GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLE 435
P+ + S+L C+ I L++GKE H +++K ++ +L +L+DMY + G
Sbjct: 363 VMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVL-TSLIDMYMKCGLSSW 421
Query: 436 AKRVFDSL--TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTAC 493
A+R+FD +D V + MI GYG GE + A+ IFE + + K++P AVL+AC
Sbjct: 422 ARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSAC 481
Query: 494 SHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAM 553
SH G V +G +F+ M ++YG P EH CM DL GR+G L +AKE+I +M +
Sbjct: 482 SHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY 541
Query: 554 WATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRN 613
++L+G+CR H + VLGE AA KL E++P++ +++++++YAA W ++ +R +
Sbjct: 542 -SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQ 600
Query: 614 LGVKKAPG 621
+ K PG
Sbjct: 601 KQLVKLPG 608
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 201/444 (45%), Gaps = 19/444 (4%)
Query: 7 ASLKNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQL 66
A++ + +G +AF+ F A S G + GC ++ G QL
Sbjct: 102 AAVSGLLENGFCRDAFRMF----GDARVSGSGMNSVTVASVLG---GCGDIEG---GMQL 151
Query: 67 HAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRN--- 123
H + GF+ + LVS Y+R + A + E + +N IS + N
Sbjct: 152 HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVM 211
Query: 124 ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH 183
L + RK ++ P++ T+ + + AC LL+ G ++H + + V
Sbjct: 212 NLVPSVFNLMRKFSSEE--PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 184 NALVSMYAKFGKLEVARHLFDNMPE-RDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
AL+ MY+K + A +F + + R+ +SWN++IS G A +LFE++ EG+
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGL-NACSHIGALKLGKE 301
+ + WN++ G+ G A K +M + + + + + L +ACS I LK GKE
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME--EKGLITWNAMLSGFAHM 359
IHGH ++ + V +LI MY +CG A +F R E K + WN M+SG+
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKH 449
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
+ +F + E EP+ T +VL C+ N++ G + + + +K
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEH 509
Query: 420 WNTLVDMYARSGKVLEAKRVFDSL 443
++D+ RSG++ EAK V D +
Sbjct: 510 IGCMIDLLGRSGRLREAKEVIDQM 533
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 210/464 (45%), Gaps = 81/464 (17%)
Query: 143 PDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHL 202
P++FT+P +LK+C +L D G +H + +F ALVSMY K ++ A +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 203 FDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNF 262
D MPER S N +S G +AF++F + G MN + ++ GG G+
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGG---CGDI 145
Query: 263 KGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALI 322
+G G ++H A+++GF++ V +L+
Sbjct: 146 EG----------------------------------GMQLHCLAMKSGFEMEVYVGTSLV 171
Query: 323 TMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAH---MDRVDEVSFLFRQMLHEGAEP 379
+MYSRCG+ A +F+++ K ++T+NA +SG M+ V V L R+ E EP
Sbjct: 172 SMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSE--EP 229
Query: 380 NYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRV 439
N VT + + CA + NLQ+G++ H +MK+E F+ ++ L+DMY++ A V
Sbjct: 230 NDVTFVNAITACASLLNLQYGRQLHGLVMKKE-FQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 440 FDSLT-RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGL 498
F L R+ +++ ++I G + G+ + A+ +FE++ +KPD ++++ S G
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 499 VAQGQVLFQEMVDDYGIIPRIEHY-----AC----------------------------- 524
V + F+ M+ ++P ++ AC
Sbjct: 349 VIEAFKFFERMLSVV-MVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLT 407
Query: 525 -MADLFGRAGLLNKAKEIITRMPYKPT-PAMWATLIGACRIHGN 566
+ D++ + GL + A+ I R KP P W +I HG
Sbjct: 408 SLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGE 451
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 234/458 (51%), Gaps = 37/458 (8%)
Query: 197 EVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGY 256
E+ HL + ++ IS S A ++F +Q N++++N M Y
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNP----NVLVFNAMIKCY 77
Query: 257 LHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLD 315
G +L S M++ I D L +CS + L+ GK +HG +RTGF L
Sbjct: 78 SLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLG 137
Query: 316 NVRNALITMYSRCGDLGHAYM-------------------------------LFQRMEEK 344
+R ++ +Y+ G +G A LF++M E+
Sbjct: 138 KIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER 197
Query: 345 GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH 404
+++WN+M+S + R E LF +M+ +G +P+ T+ +VLP+ A + L GK H
Sbjct: 198 SIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIH 257
Query: 405 CYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEG 464
FK+++ + N LVD Y +SG + A +F + RR+ V++ +I G + G+G
Sbjct: 258 STAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKG 317
Query: 465 QMALNIFEEMCKF-KIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA 523
+ +++F+ M + K+ P+ + VL CS++G V +G+ LF M++ + + R EHY
Sbjct: 318 EFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYG 377
Query: 524 CMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPD 583
M DL R+G + +A + + MP AMW +L+ ACR HG+ L E AA +L++++P
Sbjct: 378 AMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPG 437
Query: 584 HSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPG 621
+SG Y+L++N+YA G W ++ +VRT M+ ++K+ G
Sbjct: 438 NSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTG 475
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 11/384 (2%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLI 117
N+ + ++HA ++ + ++L +S + D A V + L +N +I
Sbjct: 15 NTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMI 74
Query: 118 SMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMG 177
+ +E+LS + M + + DE+TY +LK+C L D G VH E+ G
Sbjct: 75 KCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHG--ELIRTG 132
Query: 178 WSLF--VHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ + +V +Y G++ A+ +FD M ER+ V WN +I + G LF+
Sbjct: 133 FHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFK 192
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIG 294
+M E +I+ WN+M G + AL+L +M D +V L + +G
Sbjct: 193 QMSER----SIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLG 248
Query: 295 ALKLGKEIHGHAVRTG-FDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
L GK IH A +G F V NAL+ Y + GDL A +F++M+ + +++WN ++
Sbjct: 249 VLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLI 308
Query: 354 SGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
SG A + + LF M+ EG PN T VL C+ ++ G+E +M+R +
Sbjct: 309 SGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFK 368
Query: 413 FKEYLLLWNTLVDMYARSGKVLEA 436
+ + +VD+ +RSG++ EA
Sbjct: 369 LEARTEHYGAMVDLMSRSGRITEA 392
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 154/398 (38%), Gaps = 73/398 (18%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C +++ L GK +H ++I GF + + +V Y DA V + S + W
Sbjct: 112 CSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVW 171
Query: 114 NMLISMFVRN-------ELFV------------------------EALSAYRKMLRKQVI 142
N++I F + LF EAL + +M+ +
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD 231
Query: 143 PDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLF-VHNALVSMYAKFGKLEVARH 201
PDE T +VL L +G +H E + V NALV Y K G LE A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 202 LFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGN 261
+F M R+ VSWNT+IS A G LF+ M EEG
Sbjct: 292 IFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEG-------------------- 331
Query: 262 FKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAV-RTGFDVLDNVRNA 320
+ + + L CS+ G ++ G+E+ G + R + A
Sbjct: 332 -------------KVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 321 LITMYSRCGDLGHAYMLFQRME-EKGLITWNAMLSGF-AHMD-RVDEVSFLFRQMLHEGA 377
++ + SR G + A+ + M W ++LS +H D ++ EV+ + + G
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGN 438
Query: 378 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKE 415
NYV ++++ R +++ + +MK+ + ++
Sbjct: 439 SGNYVLLSNLYAEEGRWQDVEKVRT----LMKKNRLRK 472
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/541 (29%), Positives = 267/541 (49%), Gaps = 45/541 (8%)
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNE 124
++H ++ G D++ + +L++F + ++ A + E S+ +N +I + ++
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLAFSSVLDI-RYASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 125 LFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AIEVGSMGWSLFVH 183
A S + ++ K + D F++ + LK+C L + G +H A+ G M ++ +
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFT-DLR 163
Query: 184 NALVSMYAKFGKLEVARHLFDNMPER-DDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
NAL+ Y GK+ AR +FD MP+ D V+++T+++ Y A LF M++ V
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
+N+ ++ L+A S +G L +
Sbjct: 224 VVNV----------------------------------STLLSFLSAISDLGDLSGAESA 249
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
H ++ G D+ ++ ALI MY + G + A +F K ++TWN M+ +A +
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLL 309
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
+E +L RQM +E +PN T +L CA G+ +++ E+ +L
Sbjct: 310 EECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTV-ADLLEEERIALDAILGTA 368
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIF----EEMCKFK 478
LVDMYA+ G + +A +F+ + +D ++TAMI GYG G + A+ +F EE C K
Sbjct: 369 LVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENC--K 426
Query: 479 IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKA 538
++P+ + + VL ACSH GLV +G F+ MV+ Y P++EHY C+ DL GRAG L +A
Sbjct: 427 VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Query: 539 KEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAA 598
E+I +P W L+ ACR++GN LGE +L EM H IL+A +A A
Sbjct: 487 YELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVA 546
Query: 599 G 599
G
Sbjct: 547 G 547
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 184/425 (43%), Gaps = 47/425 (11%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDA-CIVTESSSSLEPLHWNMLIS 118
+S G+ LH + GF T + L+ FY DA + E S++ + ++ L++
Sbjct: 141 VSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMN 200
Query: 119 MFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AIEVGSMG 177
+++ AL +R M + +V+ + T S L A +L D + H I++G +
Sbjct: 201 GYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIG-LD 259
Query: 178 WSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERM 237
L + AL+ MY K G + AR +FD +D V+WN +I YA G E L +M
Sbjct: 260 LDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQM 319
Query: 238 QEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALK 297
+ E ++ N + F G L++C++ A
Sbjct: 320 KYEKMKPN-------------SSTFVGL---------------------LSSCAYSEAAF 345
Query: 298 LGKEIHG--HAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSG 355
+G+ + R D + + AL+ MY++ G L A +F RM++K + +W AM+SG
Sbjct: 346 VGRTVADLLEEERIALDAI--LGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISG 403
Query: 356 FAHMDRVDEVSFLFRQMLHEGAE--PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
+ E LF +M E + PN +T VL C+ + G +++ F
Sbjct: 404 YGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSF 463
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSL-TRRDEVTYTAMI---RGYGMKGEGQMALN 469
+ + +VD+ R+G++ EA + +L D + A++ R YG G+ +
Sbjct: 464 TPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMM 523
Query: 470 IFEEM 474
EM
Sbjct: 524 RLAEM 528
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 36/303 (11%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNM 115
++ LS + H I +G D + ++ L+ Y + A + + + + + WN
Sbjct: 239 DLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNC 298
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
+I + + L E + R+M +++ P+ T+ +L +C G V +E
Sbjct: 299 MIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEER 358
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ + ALV MYAK G LE A +F+ M ++D SW +IS Y + G EA LF
Sbjct: 359 IALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFN 418
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGA 295
+M+EE + + + + +V LNACSH G
Sbjct: 419 KMEEENCK--------------------------------VRPNEITFLVVLNACSHGGL 446
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRN--ALITMYSRCGDLGHAYMLFQRMEEKGLIT-WNAM 352
+ G V + V + ++ + R G L AY L + + T W A+
Sbjct: 447 VMEGIRCFKRMVE-AYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRAL 505
Query: 353 LSG 355
L+
Sbjct: 506 LAA 508
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 244/528 (46%), Gaps = 69/528 (13%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
N L+S Y + GK A +F M ++ VS ++++ Y G +A LF+RM E
Sbjct: 181 NVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER--- 237
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRT--SIHLDHVAMVVGLNACSHIGALKLGKE 301
N+I W M GY AG F+ L +MR + ++ + V AC + G +
Sbjct: 238 -NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQ 296
Query: 302 IHGHAVRTG--FDVL----------------------------DNVR-NALITMYSRCGD 330
IHG R FD+ D+V N+LIT +
Sbjct: 297 IHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQ 356
Query: 331 LGHAYMLFQRME-------------------------------EKGLITWNAMLSGFAHM 359
+ AY LF++M EK ITW AM+S F
Sbjct: 357 ISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSN 416
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
+E F +ML + PN T +SVL A +A+L G + H ++K + L +
Sbjct: 417 GYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND-LSV 475
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKI 479
N+LV MY + G +A ++F ++ + V+Y MI GY G G+ AL +F +
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGK 535
Query: 480 KPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAK 539
+P+ V +A+L+AC H G V G F+ M Y I P +HYACM DL GR+GLL+ A
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDAS 595
Query: 540 EIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAG 599
+I+ MP KP +W +L+ A + H L E AA KL+E++PD + Y++++ +Y+ G
Sbjct: 596 NLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIG 655
Query: 600 CWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEI 647
+ + ++ +KK PG +W+ + GE F GD S + EI
Sbjct: 656 KNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 195/445 (43%), Gaps = 53/445 (11%)
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+E + ++F N+ +S +A+ G L+ A +F M R VSW +IS YA G +A
Sbjct: 41 LETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKA 100
Query: 231 FKLFERMQEEGV----------------------------EMNIIIWNTMAGGYLHAGNF 262
+++F+ M E N + + TM G++ AG F
Sbjct: 101 WQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRF 160
Query: 263 KGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR-NAL 321
A L ++ D VA V L+ G L+ GK V G V + V +++
Sbjct: 161 DEAEFLYAETPVKFR-DSVASNVLLS-----GYLRAGKWNEAVRVFQGMAVKEVVSCSSM 214
Query: 322 ITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG-AEPN 380
+ Y + G + A LF RM E+ +ITW AM+ G+ ++ LF +M EG + N
Sbjct: 215 VHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVN 274
Query: 381 YVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVF 440
T+A + C + G + H ++ R + L L N+L+ MY++ G + EAK VF
Sbjct: 275 SNTLAVMFKACRDFVRYREGSQIHG-LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 441 DSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVA 500
+ +D V++ ++I G + + A +FE+M D V+ ++ S G ++
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGFSGKGEIS 389
Query: 501 QGQVLFQEMVDDYGIIPRIEH--YACMADLFGRAGLLNKAKEIITRMPYK---PTPAMWA 555
+ LF G++P ++ + M F G +A +M K P ++
Sbjct: 390 KCVELF-------GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFS 442
Query: 556 TLIGACRIHGNTVLGEWAAGKLLEM 580
+++ A + + G G++++M
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKM 467
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 167/395 (42%), Gaps = 74/395 (18%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G Q+H V + + + + L+S Y++ +A V + + + WN LI+ V+
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC---GELLDCASGVEVHKAI-EVGSMGW 178
+ EA + KM K ++ ++ ++K GE+ C VE+ + E ++ W
Sbjct: 354 RKQISEAYELFEKMPGKDMV----SWTDMIKGFSGKGEISKC---VELFGMMPEKDNITW 406
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERD---------------------------- 210
+ A++S + G E A F M +++
Sbjct: 407 T-----AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 211 ----------DVS-WNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHA 259
D+S N+++S Y G +A+K+F + E NI+ +NTM GY +
Sbjct: 462 GRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP----NIVSYNTMISGYSYN 517
Query: 260 GNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR 318
G K ALKL S + +S + V + L+AC H+G + LG + + ++++ +++
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK-YFKSMKSSYNIEPGPD 576
Query: 319 N--ALITMYSRCGDLGHAYMLFQRMEEKGLI-TWNAMLSGFAHMDRVDEVSFLFRQMLH- 374
+ ++ + R G L A L M K W ++LS RVD ++++
Sbjct: 577 HYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIEL 636
Query: 375 --EGAEPNYVTIASVLPL------CARIANLQHGK 401
+ A P YV ++ + + C RI N++ K
Sbjct: 637 EPDSATP-YVVLSQLYSIIGKNRDCDRIMNIKKSK 670
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 168/610 (27%), Positives = 295/610 (48%), Gaps = 60/610 (9%)
Query: 63 GKQLHAQVISLGFD-----QNTI--MLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNM 115
G+++H VI GF QN+I M S AR LFD+ S + + W++
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSAR-KLFDEM-------SERDVISWSV 195
Query: 116 LISMFVRNELFVEALSAYRKMLRK-QVIPDEFTYPSVLKACGELLDCASGVEVHK-AIEV 173
+I +V+++ V L +++M+ + + PD T SVLKAC + D G VH +I
Sbjct: 196 VIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRR 255
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
G +FV N+L+ MY+K ++ A +FD R
Sbjct: 256 GFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR------------------------ 291
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSH 292
NI+ WN++ G++H + AL++ M + ++ +D V +V L C
Sbjct: 292 -----------NIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKF 340
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
K IHG +R G++ + ++LI Y+ C + A + M K +++ + M
Sbjct: 341 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 400
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
+SG AH R DE +F H PN +T+ S+L C+ A+L+ K H ++R
Sbjct: 401 ISGLAHAGRSDEAISIF---CHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSL 457
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
+ + ++VD YA+ G + A+R FD +T ++ +++T +I Y + G AL +F+
Sbjct: 458 AINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFD 517
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
EM + P+ V +A L+AC+H GLV +G ++F+ MV++ P ++HY+C+ D+ RA
Sbjct: 518 EMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRA 576
Query: 533 GLLNKAKEIITRMP--YKPTPAMWATLIGACRIH-GNTVLGEWAAGKLLEMKPDHSGYYI 589
G ++ A E+I +P K + W ++ CR ++ ++LE++P S Y+
Sbjct: 577 GEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYL 636
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYP 649
L ++ +AA W ++A +R ++ V+ G + V G F GD + E+
Sbjct: 637 LASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELND 696
Query: 650 LMDGLNELMK 659
++ L+ MK
Sbjct: 697 VVQSLHRCMK 706
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 131/302 (43%), Gaps = 49/302 (16%)
Query: 62 PGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFV 121
P K +H +I G++ N + L L+ Y +L DDA V +S + + + + +IS
Sbjct: 346 PCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLA 405
Query: 122 RNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDC-----ASGVEVHKAIEVGSM 176
EA+S + M + P+ T S+L AC D A G+ + +++ + +
Sbjct: 406 HAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDI 462
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
V ++V YAK G +E+AR FD + E++ +SW IIS YA G +A LF+
Sbjct: 463 S----VGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDE 518
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGAL 296
M+++G N + YL A L+AC+H G +
Sbjct: 519 MKQKGYTPNAVT-------YLAA---------------------------LSACNHGGLV 544
Query: 297 KLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK---GLITWNAML 353
K G I V + ++ M SR G++ A L + + E G W A+L
Sbjct: 545 KKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 604
Query: 354 SG 355
SG
Sbjct: 605 SG 606
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 5/177 (2%)
Query: 319 NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAE 378
N++ Y +CGDL F M + ++WN ++ G +E + F ++ G E
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 379 PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKR 438
PN T+ V+ C + G++ H Y++ R F + N+++ MYA S L A++
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVI-RSGFCGISSVQNSILCMYADSDS-LSARK 180
Query: 439 VFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC-KFKIKPDHVAMVAVLTACS 494
+FD ++ RD ++++ +IR Y E + L +F+EM + K +PD V + +VL AC+
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 230/461 (49%), Gaps = 22/461 (4%)
Query: 197 EVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGY 256
++ RH + VSW + I+ G EA K F M GVE N I + + G
Sbjct: 24 KIQRH--NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG- 80
Query: 257 LHAGNFKGALKLLSQM----RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFD 312
G+F + L + + LD ++VG + IG K R FD
Sbjct: 81 --CGDFTSGSEALGDLLHGYACKLGLDRNHVMVG---TAIIGMYS--KRGRFKKARLVFD 133
Query: 313 VLDNVR----NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFL 368
+++ N +I Y R G + +A +F +M E+ LI+W AM++GF +E
Sbjct: 134 YMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLW 193
Query: 369 FRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYA 428
FR+M G +P+YV I + L C + L G H Y++ ++ FK + + N+L+D+Y
Sbjct: 194 FREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD-FKNNVRVSNSLIDLYC 252
Query: 429 RSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVA 488
R G V A++VF ++ +R V++ ++I G+ G +L F +M + KPD V
Sbjct: 253 RCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTG 312
Query: 489 VLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYK 548
LTACSH GLV +G FQ M DY I PRIEHY C+ DL+ RAG L A +++ MP K
Sbjct: 313 ALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Query: 549 PTPAMWATLIGACRIHGNT-VLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEV 607
P + +L+ AC HGN VL E L ++ Y++++NMYAA G W +++
Sbjct: 373 PNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKM 432
Query: 608 RTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIY 648
R M+ LG+KK PG + +++ F GD N H Y
Sbjct: 433 RRKMKGLGLKKQPGFSSIEIDDCMHVFMAGD--NAHVETTY 471
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 219/468 (46%), Gaps = 54/468 (11%)
Query: 105 SSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASG 164
S+S + W I++ RN EA + M V P+ T+ ++L CG D SG
Sbjct: 31 STSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCG---DFTSG 87
Query: 165 VE-----VHK-AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTII 218
E +H A ++G + V A++ MY+K G+ + AR +FD M +++ V+WNT+I
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 219 SCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IH 277
Y G A K+F++M E ++I W M G++ G + AL +M+ S +
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 278 LDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYML 337
D+VA++ LNAC+++GAL G +H + + F V N+LI +Y RCG + A +
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 338 FQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANL 397
F ME++ +++WN+++ GFA E FR+M +G +P+ VT L C+ + +
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 398 QHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRG 457
+ G + + + + + LVD+Y+R+G++ +A ++ S+
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM-------------- 369
Query: 458 YGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS-HSGLVAQGQVLFQEMVDDYGII 516
+KP+ V + ++L ACS H + + L + + D +
Sbjct: 370 --------------------PMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLN--V 407
Query: 517 PRIEHYACMADLFGRAGLLNKAKEIITRMP---YKPTPAMWATLIGAC 561
+Y +++++ G A ++ +M K P + I C
Sbjct: 408 KSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDC 455
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 146/362 (40%), Gaps = 78/362 (21%)
Query: 76 DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRK 135
D+N++ ++ Y R D+A + + + + W +I+ FV+ EAL +R+
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 136 MLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGK 195
M V PD + L AC L + G+ VH+ + ++ V N+L+ +Y + G
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 196 LEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGG 255
+E AR +F NM +R VSWN++I +A+ G E+ F +MQE+G + + +
Sbjct: 257 VEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAV-------- 308
Query: 256 YLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLD 315
F GA L ACSH+G ++ G + ++ + +
Sbjct: 309 -----TFTGA---------------------LTACSHVGLVEEGLR-YFQIMKCDYRISP 341
Query: 316 NVRN--ALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQML 373
+ + L+ +YSR G L A L Q M K
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMPMK----------------------------- 372
Query: 374 HEGAEPNYVTIASVLPLCARIAN---LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARS 430
PN V I S+L C+ N L H + + Y++L N MYA
Sbjct: 373 -----PNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSN----MYAAD 423
Query: 431 GK 432
GK
Sbjct: 424 GK 425
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 12/228 (5%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C N+ +LS G +H V+S F N + L+ Y R + A V + +
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN +I F N E+L +RKM K PD T+ L AC + G+ + ++
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 173 VG-SMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ + + LV +Y++ G+LE A L +MP + + I S A+ G
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEV--VIGSLLAACSNHGNNI 392
Query: 232 KLFERMQEEGVEMNI------IIWNTMAGGYLHAGNFKGALKLLSQMR 273
L ER+ + ++N+ +I + M Y G ++GA K+ +M+
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVILSNM---YAADGKWEGASKMRRKMK 437
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 158/614 (25%), Positives = 274/614 (44%), Gaps = 39/614 (6%)
Query: 54 CINVNSLSPGKQLHAQVISLGFD---QNTIMLPRLVSFYARFNLFDDACIVTESSSSLEP 110
C N + L G+ +HA +I ++ + L++ Y + A + +
Sbjct: 41 CANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNV 100
Query: 111 LHWNMLISMFVRNELFVEALSAYRKML-RKQVIPDEFTYPSVLKACGELLDCASGVEVHK 169
+ W ++ + + E L ++ M + P+EF V K+C G + H
Sbjct: 101 VSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHG 160
Query: 170 AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGE 229
+ FV N LV MY+ A + D++P D +++ +S Y G + E
Sbjct: 161 CFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKE 220
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNA 289
+ + E +WN + + +L+L S +R
Sbjct: 221 GLDVLRKTANED-----FVWNNLT--------YLSSLRLFSNLRD--------------- 252
Query: 290 CSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
L L ++H VR GF+ ALI MY +CG + +A +F + +
Sbjct: 253 ------LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
++ + +E LF +M + PN T A +L A ++ L+ G H ++K
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK 366
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
++ ++++ N LV+MYA+SG + +A++ F +T RD VT+ MI G G G+ AL
Sbjct: 367 -SGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALE 425
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
F+ M P+ + + VL ACSH G V QG F +++ + + P I+HY C+ L
Sbjct: 426 AFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLL 485
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
+AG+ A++ + P + W TL+ AC + N LG+ A +E P+ SG Y+
Sbjct: 486 SKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYV 545
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYP 649
L++N++A + W +A+VR+ M N GVKK PG +W+ + + F D +P IY
Sbjct: 546 LLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYA 605
Query: 650 LMDGLNELMKDAGY 663
+ + +K GY
Sbjct: 606 KVKEVMSKIKPLGY 619
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 8/260 (3%)
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFD--VLDNVR-NALITMYSRCGDLGHAYMLFQRMEE 343
L C++ L++G+ IH H + T D + N+LI +Y +C + A LF M E
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 344 KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGKE 402
+ +++W AM+ G+ + EV LF+ M G + PN V C+ ++ GK+
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 403 FH-CYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMK 461
FH C++ + + + NTLV MY+ EA RV D L D +++ + GY
Sbjct: 158 FHGCFL--KYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 462 GEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEH 521
G + L++ + +++ ++ L S+ + + MV +G +E
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMV-RFGFNAEVEA 274
Query: 522 YACMADLFGRAGLLNKAKEI 541
+ +++G+ G + A+ +
Sbjct: 275 CGALINMYGKCGKVLYAQRV 294
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 261/501 (52%), Gaps = 36/501 (7%)
Query: 164 GVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYAS 223
G+++H + + V N L++ Y+K +R F++ P++ +W++IISC+A
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFA- 92
Query: 224 RGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAM 283
Q E M++ M G L DHV +
Sbjct: 93 --------------QNELPWMSLEFLKKMMAGNLRPD------------------DHV-L 119
Query: 284 VVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE 343
+C+ + +G+ +H +++TG+D V ++L+ MY++CG++ +A +F M +
Sbjct: 120 PSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQ 179
Query: 344 KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
+ ++TW+ M+ G+A M +E +LF++ L E N + +SV+ +CA L+ G++
Sbjct: 180 RNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQI 239
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGE 463
H + + F + ++LV +Y++ G A +VF+ + ++ + AM++ Y
Sbjct: 240 HG-LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSH 298
Query: 464 GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA 523
Q + +F+ M +KP+ + + VL ACSH+GLV +G+ F +M + I P +HYA
Sbjct: 299 TQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYA 357
Query: 524 CMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPD 583
+ D+ GRAG L +A E+IT MP PT ++W L+ +C +H NT L +AA K+ E+ P
Sbjct: 358 SLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPV 417
Query: 584 HSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPH 643
SG +I ++N YAA G + + A+ R +R+ G KK G +WV+ + F G+ +
Sbjct: 418 SSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEK 477
Query: 644 AGEIYPLMDGLNELMKDAGYI 664
+ EIY + L E M+ AGYI
Sbjct: 478 SKEIYEKLAELGEEMEKAGYI 498
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 187/381 (49%), Gaps = 35/381 (9%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G QLH V+ G ++ L++FY++ L D+ E S W+ +IS F +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
NEL +L +KM+ + PD+ PS K+C L C G VH +FV
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
++LV MYAK G++ AR +FD MP+R+ V+W+ ++ YA G EA LF+ E +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
+N ++++ ++ C++ L+LG++I
Sbjct: 214 AVNDYSFSSV----------------------------------ISVCANSTLLELGRQI 239
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
HG ++++ FD V ++L+++YS+CG AY +F + K L WNAML +A
Sbjct: 240 HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHT 299
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
+V LF++M G +PN++T +VL C+ + G+ ++ MK + + + +
Sbjct: 300 QKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGR-YYFDQMKESRIEPTDKHYAS 358
Query: 423 LVDMYARSGKVLEAKRVFDSL 443
LVDM R+G++ EA V ++
Sbjct: 359 LVDMLGRAGRLQEALEVITNM 379
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 123/304 (40%), Gaps = 35/304 (11%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C ++ G+ +H + G+D + + LV YA+ A + + +
Sbjct: 125 SCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVT 184
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W+ ++ + + EAL +++ L + + +++++ SV+ C G ++H
Sbjct: 185 WSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSI 244
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
S S FV ++LVS+Y+K G E A +F+ +P ++ WN ++ YA + +
Sbjct: 245 KSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIE 304
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
LF+RM+ G++ N I + + LNACSH
Sbjct: 305 LFKRMKLSGMKPNFITFLNV----------------------------------LNACSH 330
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME-EKGLITWNA 351
G + G+ + + D +L+ M R G L A + M + W A
Sbjct: 331 AGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 352 MLSG 355
+L+
Sbjct: 391 LLTS 394
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 239/465 (51%), Gaps = 9/465 (1%)
Query: 199 ARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLH 258
AR LFD+ +N +I Y E+ L+ + +G+ + +N +
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 259 AGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNV 317
+ + L SQ R+ D + A + +GAL + + + V
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW--- 151
Query: 318 RNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGA 377
NA+IT Y R GD+ A LF M K + +W ++SGF+ E +F M + +
Sbjct: 152 -NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 378 -EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEA 436
+PN++T+ SVLP CA + L+ G+ Y + F + + + N ++MY++ G + A
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGY-ARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 437 KRVFDSL-TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSH 495
KR+F+ L +R+ ++ +MI G+ AL +F +M + KPD V V +L AC H
Sbjct: 270 KRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVH 329
Query: 496 SGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWA 555
G+V +GQ LF+ M + + I P++EHY CM DL GR G L +A ++I MP KP +W
Sbjct: 330 GGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWG 389
Query: 556 TLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLG 615
TL+GAC HGN + E A+ L +++P + G ++++N+YAA W + +R M+
Sbjct: 390 TLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKET 449
Query: 616 VKKAPGCAW-VDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMK 659
+ KA G ++ V+VG + F V D S+P + EIY +++ + MK
Sbjct: 450 MTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 204/441 (46%), Gaps = 32/441 (7%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSF----YARFNLFD---DACIVTESSSSLEPLHWNML 116
KQLHA + G D+ +L RL+ YAR LFD ++C +N L
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLIPNLVYAR-KLFDHHQNSCTFL----------YNKL 53
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSM 176
I + + E++ Y + + P T+ + A +H
Sbjct: 54 IQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGF 113
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
F L++ YAK G L AR +FD M +RD WN +I+ Y RG A +LF+
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR--TSIHLDHVAMVVGLNACSHIG 294
M + N+ W T+ G+ GN+ ALK+ M S+ +H+ +V L AC+++G
Sbjct: 174 MPRK----NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 295 ALKLGKEIHGHAVRTGFDVLDN--VRNALITMYSRCGDLGHAYMLFQRM-EEKGLITWNA 351
L++G+ + G+A GF DN V NA I MYS+CG + A LF+ + ++ L +WN+
Sbjct: 230 ELEIGRRLEGYARENGF--FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNS 287
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
M+ A + DE LF QML EG +P+ VT +L C + G+E + +
Sbjct: 288 MIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVH 347
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEGQMALNI 470
+ L + ++D+ R GK+ EA + ++ + D V + ++ G ++A
Sbjct: 348 KISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIA 407
Query: 471 FEEMCKFKIKPDHVAMVAVLT 491
E + FK++P + +++
Sbjct: 408 SEAL--FKLEPTNPGNCVIMS 426
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 37/263 (14%)
Query: 62 PGKQLHAQVISLGFDQNTIMLPRLVSFYARF-------NLFDD----------------- 97
P + LH+Q GF+ ++ L++ YA+ +FD+
Sbjct: 100 PLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQ 159
Query: 98 -------ACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLR-KQVIPDEFTYP 149
A + +S W +IS F +N + EAL + M + K V P+ T
Sbjct: 160 RRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVV 219
Query: 150 SVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNM-PE 208
SVL AC L + G + +++V NA + MY+K G ++VA+ LF+ + +
Sbjct: 220 SVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQ 279
Query: 209 RDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKL 268
R+ SWN++I A+ G EA LF +M EG + + + + + +H G +L
Sbjct: 280 RNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQEL 339
Query: 269 LSQM----RTSIHLDHVAMVVGL 287
M + S L+H ++ L
Sbjct: 340 FKSMEEVHKISPKLEHYGCMIDL 362
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 156/573 (27%), Positives = 276/573 (48%), Gaps = 51/573 (8%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNML 116
V L G +H + G + + L+S Y++ + A + + + + W+ +
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAM 372
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSM 176
I+ + + EA+S +R M+R + P+ T SVL+ C + G +H +
Sbjct: 373 IASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADI 432
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
L A++SMYAK G+ + A K FER
Sbjct: 433 ESELETATAVISMYAKCGR-------------------------------FSPALKAFER 461
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNACSHIGA 295
+ + + + +N +A GY G+ A + M+ + D MV L C+
Sbjct: 462 LPIK----DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSD 517
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME-EKGLITWNAMLS 354
G ++G ++ GFD +V +ALI M+++C L A +LF + EK ++WN M++
Sbjct: 518 YARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMN 577
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
G+ + +E FRQM E +PN VT +++ A ++ L+ G H +++ F
Sbjct: 578 GYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQC-GFC 636
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
+ N+LVDMYA+ G + +++ F ++ + V++ M+ Y G A+++F M
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Query: 475 CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGL 534
+ ++KPD V+ ++VL+AC H+GLV +G+ +F+EM + + I +EHYACM DL G+AGL
Sbjct: 697 QENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGL 756
Query: 535 LNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANM 594
+A E++ RM K + +W L+ + R+H N L A +L++++P + +Y
Sbjct: 757 FGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQD--- 813
Query: 595 YAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDV 627
L EV R +KK P C+W++V
Sbjct: 814 -------RRLGEVNNVSR---IKKVPACSWIEV 836
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 231/537 (43%), Gaps = 53/537 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C G ++H + +G + + + LV Y + A V + + +
Sbjct: 109 ACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVT 168
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGEL-----LDCASGVEV 167
WN ++S +N AL + M V D + +++ A +L C G+ +
Sbjct: 169 WNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVI 228
Query: 168 HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW 227
K G+ + L+ MY L A +F+ + +D+ SW T
Sbjct: 229 KK-------GFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT----------- 270
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVG 286
M Y H G F+ L+L MR + ++ VA
Sbjct: 271 ------------------------MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASA 306
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
L A +++G L G IH +AV+ G +V +L++MYS+CG+L A LF +E++ +
Sbjct: 307 LQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDV 366
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
++W+AM++ + + DE LFR M+ +PN VT+ SVL CA +A + GK HCY
Sbjct: 367 VSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCY 426
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM 466
+K + E L ++ MYA+ G+ A + F+ L +D V + A+ +GY G+
Sbjct: 427 AIKADIESE-LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANK 485
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
A ++++ M + PD MV +L C+ A+G ++ +++ +G +
Sbjct: 486 AFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII-KHGFDSECHVAHALI 544
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPD 583
++F + L A + + ++ + W ++ +HG E A +MK +
Sbjct: 545 NMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ---AEEAVATFRQMKVE 598
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 234/521 (44%), Gaps = 44/521 (8%)
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNE 124
Q+H +I G + +L++ Y+ F D + ++ +S + WN +I + R
Sbjct: 23 QVHGSLIVSGLKPHN----QLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 125 LFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH 183
L EAL + M ++ I PD++++ LKAC +D G+ +H I + +++
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 184 NALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
ALV MY K L AR +FD M +D V+WNT++S A G A LF M+
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRS---- 194
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
+ +DHV++ + A S + + + +H
Sbjct: 195 ------------------------------CCVDIDHVSLYNLIPAVSKLEKSDVCRCLH 224
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVD 363
G ++ GF + + LI MY C DL A +F+ + K +W M++ +AH +
Sbjct: 225 GLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFE 282
Query: 364 EVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTL 423
EV LF M + N V AS L A + +L G H Y +++ + + + +L
Sbjct: 283 EVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGD-VSVATSL 341
Query: 424 VDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDH 483
+ MY++ G++ A+++F ++ RD V+++AMI Y G+ A+++F +M + IKP+
Sbjct: 342 MSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 484 VAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIIT 543
V + +VL C+ G+ + + I +E + ++ + G + A +
Sbjct: 402 VTLTSVLQGCAGVAASRLGKSIHCYAI-KADIESELETATAVISMYAKCGRFSPALKAFE 460
Query: 544 RMPYKPTPAMWATLIGACRI-HGNTVLGEWAAGKLLEMKPD 583
R+P K A A G +I N + KL + PD
Sbjct: 461 RLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPD 501
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 155/385 (40%), Gaps = 35/385 (9%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
GC V + GK +H I + ++S YA+ F A E + +
Sbjct: 410 GCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA 469
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N L + + +A Y+ M V PD T +L+ C D A G V+ I
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII 529
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP-ERDDVSWNTIISCYASRGTWGEAF 231
V +AL++M+ K L A LFD E+ VSWN +++ Y G EA
Sbjct: 530 KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAV 589
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
F +M+ E + N + + + + A +
Sbjct: 590 ATFRQMKVEKFQPNAVTFVNI----------------------------------VRAAA 615
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNA 351
+ AL++G +H ++ GF V N+L+ MY++CG + + F + K +++WN
Sbjct: 616 ELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNT 675
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
MLS +A LF M +P+ V+ SVL C ++ GK + +R
Sbjct: 676 MLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERH 735
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEA 436
+ + + + +VD+ ++G EA
Sbjct: 736 KIEAEVEHYACMVDLLGKAGLFGEA 760
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 173/611 (28%), Positives = 272/611 (44%), Gaps = 74/611 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + SL + +HAQ++ G + + +LVS + D + + +S P
Sbjct: 38 ACKDTASL---RHVHAQILRRGVLSSRVA-AQLVSCSSLLKSPDYSLSIFRNSEERNPFV 93
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
N LI N F ++ + MLR V PD T+P VLK+ +L G +H A
Sbjct: 94 LNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATL 153
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ FV +LV MYAK G+L+ AF+
Sbjct: 154 KNFVDCDSFVRLSLVDMYAKTGQLK-------------------------------HAFQ 182
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
+FE + + +I+IWN + GY A + A L M N+ S
Sbjct: 183 VFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER------------NSGSW 230
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
+ LI Y G+L A LF+ M EK +++W +
Sbjct: 231 --------------------------STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTL 264
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
++GF+ + + +ML +G +PN TIA+VL C++ L G H YI+
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD-NG 323
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
K + LVDMYA+ G++ A VF ++ +D +++TAMI+G+ + G A+ F
Sbjct: 324 IKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFR 383
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
+M KPD V +AVLTAC +S V G F M DY I P ++HY + DL GRA
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 533 GLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIA 592
G LN+A E++ MP P WA L AC+ H E + LLE+ P+ G YI +
Sbjct: 444 GKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLD 503
Query: 593 NMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMD 652
+A+ G ++ + R ++ +++ G +++++ G+ + F GD S+ EI +D
Sbjct: 504 KTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLD 563
Query: 653 GLNELMKDAGY 663
+ L GY
Sbjct: 564 EIISLAIQKGY 574
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 71/352 (20%)
Query: 279 DHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLF 338
D + ++AC +L+ +H +R G + V L++ S ++ +F
Sbjct: 28 DESHFISLIHACKDTASLR---HVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSIF 83
Query: 339 QRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQ 398
+ EE+ NA++ G R + F ML G +P+ +T VL +++
Sbjct: 84 RNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRW 143
Query: 399 HGKEFHCYIMKR----EQF------------------------------KEYLLLWNTLV 424
G+ H +K + F KE +L+WN L+
Sbjct: 144 LGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLI 203
Query: 425 DMYAR-------------------------------SGKVLEAKRVFDSLTRRDEVTYTA 453
+ Y R SG++ AK++F+ + ++ V++T
Sbjct: 204 NGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTT 263
Query: 454 MIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDY 513
+I G+ G+ + A++ + EM + +KP+ + AVL+ACS SG + G + + D
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG-IRIHGYILDN 322
Query: 514 GIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHG 565
GI + D++ + G L+ A + + M +K + W +I +HG
Sbjct: 323 GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILS-WTAMIQGWAVHG 373
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 240/466 (51%), Gaps = 23/466 (4%)
Query: 199 ARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLH 258
A +FD +PE D +S +I + EA + F+R+ G+ N + T+ G
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 259 AGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR 318
+ + +KL Q+ A+ +GL + +G+ L + + D+ R
Sbjct: 106 SRD----VKLGKQLHC------YALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR 155
Query: 319 NA-------LITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQ 371
+ LI+ Y + + A LF+ M E+ ++TWNA++ GF+ R +E F
Sbjct: 156 DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 372 MLHEGAE-PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARS 430
ML EG PN T + + IA+ GK H +K + + +WN+L+ Y++
Sbjct: 216 MLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 275
Query: 431 GKVLEAKRVFDSLT--RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK-FKIKPDHVAMV 487
G + ++ F+ L +R+ V++ +MI GY G G+ A+ +FE+M K ++P++V ++
Sbjct: 276 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTIL 335
Query: 488 AVLTACSHSGLVAQGQVLFQEMVDDYGI--IPRIEHYACMADLFGRAGLLNKAKEIITRM 545
VL AC+H+GL+ +G + F + V+DY + +EHYACM D+ R+G +A+E+I M
Sbjct: 336 GVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Query: 546 PYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELA 605
P P W L+G C+IH N L + AA K+LE+ P Y++++N Y+A W ++
Sbjct: 396 PLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVS 455
Query: 606 EVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLM 651
+R M+ G+K+ GC+W++V + F D +N E+Y ++
Sbjct: 456 LIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 189/373 (50%), Gaps = 19/373 (5%)
Query: 82 LPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQV 141
+P LV + +L +A V + L+ + +I FV+ VEA A++++L +
Sbjct: 31 IPELVK-HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGI 89
Query: 142 IPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGSMGWSLFVHNALVSMYAKFGKLEVAR 200
P+EFT+ +V+ + D G ++H A+++G + ++FV +A+++ Y K L AR
Sbjct: 90 RPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMG-LASNVFVGSAVLNCYVKLSTLTDAR 148
Query: 201 HLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAG 260
FD+ + + VS +IS Y + + EA LF M E V + WN + GG+ G
Sbjct: 149 RCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTG 204
Query: 261 NFKGALKLLSQM-RTSIHL-DHVAMVVGLNACSHIGALKLGKEIHGHAVR---TGFDVLD 315
+ A+ M R + + + + A S+I + GK IH A++ F+V
Sbjct: 205 RNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVF- 263
Query: 316 NVRNALITMYSRCGDLGHAYMLFQRMEE--KGLITWNAMLSGFAHMDRVDEVSFLFRQML 373
V N+LI+ YS+CG++ + + F ++EE + +++WN+M+ G+AH R +E +F +M+
Sbjct: 264 -VWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMV 322
Query: 374 HE-GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL--WNTLVDMYARS 430
+ PN VTI VL C +Q G + + L L + +VDM +RS
Sbjct: 323 KDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRS 382
Query: 431 GKVLEAKRVFDSL 443
G+ EA+ + S+
Sbjct: 383 GRFKEAEELIKSM 395
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 41/288 (14%)
Query: 76 DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRK 135
D N + + L+S Y + + F++A + + + WN +I F + EA++ +
Sbjct: 156 DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 136 MLRKQ-VIPDEFTYPSVLKACGELLDCASGVEVHK-AIEVGSMGWSLFVHNALVSMYAKF 193
MLR+ VIP+E T+P + A + +G +H AI+ +++FV N+L+S Y+K
Sbjct: 216 MLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 275
Query: 194 GKLEVARHLFDNMPE--RDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNT 251
G +E + F+ + E R+ VSWN++I YA G EA +FE+M ++
Sbjct: 276 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKD----------- 324
Query: 252 MAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGF 311
T++ ++V ++ L AC+H G ++ G AV
Sbjct: 325 ----------------------TNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD 362
Query: 312 D--VLDNVRNA-LITMYSRCGDLGHAYMLFQRME-EKGLITWNAMLSG 355
D +L+ A ++ M SR G A L + M + G+ W A+L G
Sbjct: 363 DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGG 410
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 333 HAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA 392
+A+ +F + E +I+ A++ F R E S F+++L G PN T +V+
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 393 RIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYT 452
+++ GK+ HCY +K + + + +++ Y + + +A+R FD + V+ T
Sbjct: 105 TSRDVKLGKQLHCYALKM-GLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 453 AMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDD 512
+I GY K E + AL++F M + + V AV+ S +G + F +M+ +
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLRE 219
Query: 513 YGIIPRIEHYAC 524
+IP + C
Sbjct: 220 GVVIPNESTFPC 231
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/409 (33%), Positives = 219/409 (53%), Gaps = 8/409 (1%)
Query: 249 WNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAV 307
WN ++ GY + + ++ + S+M R I + + L AC+ L G++I +
Sbjct: 81 WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 308 RTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSF 367
+ GFD V N LI +Y C A +F M E+ +++WN++++ +++ V
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 368 LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMY 427
F +M+ + P+ T+ +L C NL GK H +M RE + L LVDMY
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRE-LELNCRLGTALVDMY 257
Query: 428 ARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK-FKIKPDHVAM 486
A+SG + A+ VF+ + ++ T++AMI G G + AL +F +M K ++P++V
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 487 VAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMP 546
+ VL ACSH+GLV G F EM + I P + HY M D+ GRAG LN+A + I +MP
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 547 YKPTPAMWATLIGACRIH---GNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSE 603
++P +W TL+ AC IH + +GE +L+E++P SG +++AN +A A W+E
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAE 437
Query: 604 LAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMD 652
AEVR M+ +KK G + +++GG F FF G IY L+D
Sbjct: 438 AAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLD 486
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 133/315 (42%), Gaps = 38/315 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C + L+ G+Q+ +V+ GFD + + L+ Y DA V + + +
Sbjct: 122 ACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS 181
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
WN +++ V N + +M+ K+ PDE T +L ACG L + G VH +
Sbjct: 182 WNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNL--SLGKLVHSQVM 239
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
V + + + ALV MYAK G LE AR +F+ M +++ +W+ +I A G EA +
Sbjct: 240 VRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQ 299
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH 292
LF +M +E +S+ ++V + L ACSH
Sbjct: 300 LFSKMMKE---------------------------------SSVRPNYVTFLGVLCACSH 326
Query: 293 IGALKLG-KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME-EKGLITWN 350
G + G K H + A++ + R G L AY ++M E + W
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWR 386
Query: 351 AMLSGFA-HMDRVDE 364
+LS + H D DE
Sbjct: 387 TLLSACSIHHDEDDE 401
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 210/415 (50%), Gaps = 36/415 (8%)
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMRTS--IHLDHVAMVVGLNACSHIGALKLGKEI 302
+I Y + GN + AL L QM +S + LD + L +C+ LG +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
H H+V++ F V AL+ MY +C + HA LF + ++ + WNAM+S + H +V
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 363 --------------DEVSF-------------------LFRQMLHEGAEPNYVTIASVLP 389
+E SF +R+M+ +PN +T+ +++
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 390 LCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEV 449
C+ I + KE H Y R + + L + LV+ Y R G ++ + VFDS+ RD V
Sbjct: 191 ACSAIGAFRLIKEIHSYAF-RNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 450 TYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
++++I Y + G+ + AL F+EM K+ PD +A + VL ACSH+GL + V F+ M
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 510 VDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVL 569
DYG+ +HY+C+ D+ R G +A ++I MP KPT W L+GACR +G L
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 570 GEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAW 624
E AA +LL ++P++ Y+L+ +Y + G E +R M+ GVK +PG +W
Sbjct: 370 AEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 14/341 (4%)
Query: 128 EALSAYRKMLRKQVIP-DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNAL 186
+AL+ + +M +P D + LK+C G VH + + FV AL
Sbjct: 30 QALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCAL 89
Query: 187 VSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
+ MY K + AR LFD +P+R+ V WN +IS Y G EA +L+E M V N
Sbjct: 90 LDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMD---VMPNE 146
Query: 247 IIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL----DHVAMVVGLNACSHIGALKLGKEI 302
+N + G + G G+ + + R I + + ++ ++ACS IGA +L KEI
Sbjct: 147 SSFNAIIKGLV--GTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEI 204
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
H +A R + +++ L+ Y RCG + + ++F ME++ ++ W++++S +A
Sbjct: 205 HSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDA 264
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
+ F++M P+ + +VL C+ + + + ++
Sbjct: 265 ESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSC 324
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEV-TYTAMI---RGYG 459
LVD+ +R G+ EA +V ++ + T+ A++ R YG
Sbjct: 325 LVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/568 (27%), Positives = 261/568 (45%), Gaps = 111/568 (19%)
Query: 136 MLRKQVIPDEF------TYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSM 189
M + ++P F +Y +++A G G +H + + + LV+
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 190 YAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIW 249
Y + GK+ AR +FD MP+RD +I A G + E+ F M ++G++++ I
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 250 NTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRT 309
++ K + LL + + GK IH ++
Sbjct: 121 PSL---------LKASRNLLDR-------------------------EFGKMIHCLVLKF 146
Query: 310 GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----------------------- 346
++ + ++LI MYS+ G++G+A +F + E+ L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 347 ------------ITWNAMLSGFAHMDRVDEVSFL-------------------------- 368
ITWNA++SGF+HM ++VS +
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHN 266
Query: 369 ---------FRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
F+QML G PN TI ++LP C +A ++HGKE H Y + +++ +
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVV-TGLEDHGFV 325
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKI 479
+ L+DMY + G + EA +F ++ VT+ +MI Y G A+ +F++M
Sbjct: 326 RSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE 385
Query: 480 KPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAK 539
K DH+ A+LTACSH+GL GQ LF M + Y I+PR+EHYACM DL GRAG L +A
Sbjct: 386 KLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAY 445
Query: 540 EIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAG 599
E+I M +P +W L+ ACR HGN L AA L E++P++SG +L+ ++YA AG
Sbjct: 446 EMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAG 505
Query: 600 CWSELAEVRTYMRNLGVKKAPGCAWVDV 627
W + ++ ++ ++ G +WV+
Sbjct: 506 SWESVVRMKKMIKKKRFRRFLGSSWVET 533
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 205/417 (49%), Gaps = 36/417 (8%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+ LHA +++ G + T + +LV+FY DA V + + ++I R
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
N + E+L +R+M + + D F PS+LKA LLD G +H + S F+
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
++L+ MY+KFG++ AR +F ++ E+D V +N +IS YA+ EA L + M+ G+
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLL--------------------------------- 269
+ ++I WN + G+ H N + ++L
Sbjct: 215 KPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFD 274
Query: 270 --SQMRT-SIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYS 326
QM T ++ + ++ L AC+ + +K GKEIHG++V TG + VR+AL+ MY
Sbjct: 275 AFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYG 334
Query: 327 RCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIAS 386
+CG + A +LF++ +K +T+N+M+ +A+ D+ LF QM G + +++T +
Sbjct: 335 KCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTA 394
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
+L C+ G+ + + + L + +VD+ R+GK++EA + ++
Sbjct: 395 ILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM 451
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 235/443 (53%), Gaps = 10/443 (2%)
Query: 225 GTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSI--HLDHVA 282
G+ A LF+ + + WN + G+ ++ + ++ ++M S D
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSD---WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFT 109
Query: 283 MVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDN--VRNALITMYSRCGDLGHAYMLFQR 340
L +C I ++ EIHG +R+GF LD+ V +L+ YS G + A +F
Sbjct: 110 FNFALKSCERIKSIPKCLEIHGSVIRSGF--LDDAIVATSLVRCYSANGSVEIASKVFDE 167
Query: 341 MEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHG 400
M + L++WN M+ F+H+ ++ ++++M +EG + T+ ++L CA ++ L G
Sbjct: 168 MPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG 227
Query: 401 KEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGM 460
H I + + + + N L+DMYA+ G + A VF+ + +RD +T+ +MI GYG+
Sbjct: 228 VMLH-RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGV 286
Query: 461 KGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIE 520
G G A++ F +M ++P+ + + +L CSH GLV +G F+ M + + P ++
Sbjct: 287 HGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVK 346
Query: 521 HYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEM 580
HY CM DL+GRAG L + E+I P +W TL+G+C+IH N LGE A KL+++
Sbjct: 347 HYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL 406
Query: 581 KPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTS 640
+ ++G Y+L+ ++Y+AA A +R +R+ ++ PG +W+++G + F V D
Sbjct: 407 EAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKM 466
Query: 641 NPHAGEIYPLMDGLNELMKDAGY 663
+P + IY + + AGY
Sbjct: 467 HPESAVIYSELGEVINRAILAGY 489
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 220/484 (45%), Gaps = 70/484 (14%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYA------------RFNLFDDACI 100
GC NS+ +++H+ VI G + + L+ F A F+ FD
Sbjct: 14 GC---NSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFD---- 66
Query: 101 VTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELL 159
++ S+S WN LI F + + ++ Y +ML V PD FT+ LK+C +
Sbjct: 67 -SDPSTS----DWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIK 121
Query: 160 DCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIIS 219
+E+H ++ V +LV Y+ G +E+A +FD MP RD VSWN +I
Sbjct: 122 SIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMIC 181
Query: 220 CYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLD 279
C++ G +A +++RM EGV G D
Sbjct: 182 CFSHVGLHNQALSMYKRMGNEGV----------CG------------------------D 207
Query: 280 HVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQ 339
+V L++C+H+ AL +G +H A + V NALI MY++CG L +A +F
Sbjct: 208 SYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 340 RMEEKGLITWNAMLSGFA-HMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQ 398
M ++ ++TWN+M+ G+ H V+ +SF FR+M+ G PN +T +L C+ ++
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHGVEAISF-FRKMVASGVRPNAITFLGLLLGCSHQGLVK 326
Query: 399 HGKEFHCYIMKRE-QFKEYLLLWNTLVDMYARSGKVLEA-KRVFDSLTRRDEVTYTAMIR 456
G E H IM + + + +VD+Y R+G++ + + ++ S D V + ++
Sbjct: 327 EGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
Query: 457 GYGMKGE---GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDY 513
+ G++A+ ++ F D+V M ++ +A + + A + L + D
Sbjct: 386 SCKIHRNLELGEVAMKKLVQLEAFN-AGDYVLMTSIYSAANDAQAFASMRKLIRS--HDL 442
Query: 514 GIIP 517
+P
Sbjct: 443 QTVP 446
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 234/476 (49%), Gaps = 37/476 (7%)
Query: 191 AKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWN 250
+ FG L A +F +P+ WN II +A AF + M
Sbjct: 48 SPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSM------------- 94
Query: 251 TMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTG 310
L+ S +D + L AC+ ++H R G
Sbjct: 95 ---------------LQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRG 139
Query: 311 FDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFR 370
+ L+ YS+ GDL AY LF M + + +WNA+++G +R E L++
Sbjct: 140 LSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYK 199
Query: 371 QMLHEGAEPNYVTIASVLPLCARIANLQHGKE-FHCYIMKREQFKEYLLLWNTLVDMYAR 429
+M EG + VT+ + L C+ + +++ G+ FH Y + +++ N +DMY++
Sbjct: 200 RMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGY------SNDNVIVSNAAIDMYSK 253
Query: 430 SGKVLEAKRVFDSLT-RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVA 488
G V +A +VF+ T ++ VT+ MI G+ + GE AL IF+++ IKPD V+ +A
Sbjct: 254 CGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLA 313
Query: 489 VLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYK 548
LTAC H+GLV G +F M G+ ++HY C+ DL RAG L +A +II M
Sbjct: 314 ALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMI 372
Query: 549 PTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVR 608
P P +W +L+GA I+ + + E A+ ++ EM ++ G ++L++N+YAA G W ++ VR
Sbjct: 373 PDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVR 432
Query: 609 TYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
M + VKK PG ++++ G F+ D S+ EIY +D + +++ GY+
Sbjct: 433 DDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYV 488
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 188/426 (44%), Gaps = 63/426 (14%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL--HWNML 116
S S KQL + ++ G Q++ + RL+ A D + V +PL WN +
Sbjct: 15 SFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAI 74
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIP------DEFTYPSVLKACGELLDCASGVEVHKA 170
I F + A S YR ML++ D T LKAC L ++ ++H
Sbjct: 75 IRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQ 134
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
I + + L+ Y+K G L A LFD MP RD SWN +I+ S EA
Sbjct: 135 INRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEA 194
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
+L++RM+ EG+ + V +V L AC
Sbjct: 195 MELYKRMETEGIRRS----------------------------------EVTVVAALGAC 220
Query: 291 SHIGALKLGKEI-HGHAVRTGFDVLDN--VRNALITMYSRCGDLGHAYMLFQRME-EKGL 346
SH+G +K G+ I HG++ DN V NA I MYS+CG + AY +F++ +K +
Sbjct: 221 SHLGDVKEGENIFHGYSN-------DNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSV 273
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHG----KE 402
+TWN M++GFA +F ++ G +P+ V+ + L C +++G
Sbjct: 274 VTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNN 333
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTR-RDEVTYTAMIRGYGMK 461
C ++R K Y +VD+ +R+G++ EA + S++ D V + +++ +
Sbjct: 334 MACKGVER-NMKHY----GCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIY 388
Query: 462 GEGQMA 467
+ +MA
Sbjct: 389 SDVEMA 394
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 242/481 (50%), Gaps = 40/481 (8%)
Query: 210 DDVSWNTIIS-CYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKL 268
D V+ + +++ C AS A+ +F R+ + N +WNT+ G+ + + A+ +
Sbjct: 56 DTVTASRVLAFCCASPSDMNYAYLVFTRINHK----NPFVWNTIIRGFSRSSFPEMAISI 111
Query: 269 LSQM---RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMY 325
M S+ + A +G + G+++HG ++ G + +RN ++ MY
Sbjct: 112 FIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMY 171
Query: 326 -------------------------------SRCGDLGHAYMLFQRMEEKGLITWNAMLS 354
++CG + A LF M ++ ++WN+M+S
Sbjct: 172 VTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMIS 231
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
GF R + +FR+M + +P+ T+ S+L CA + + G+ H YI+ R +F+
Sbjct: 232 GFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV-RNRFE 290
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
++ L+DMY + G + E VF+ ++ + +MI G G + A+++F E+
Sbjct: 291 LNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSEL 350
Query: 475 CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGL 534
+ ++PD V+ + VLTAC+HSG V + F+ M + Y I P I+HY M ++ G AGL
Sbjct: 351 ERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGL 410
Query: 535 LNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANM 594
L +A+ +I MP + +W++L+ ACR GN + + AA L ++ PD + Y+L++N
Sbjct: 411 LEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNA 470
Query: 595 YAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGL 654
YA+ G + E E R M+ ++K GC+ ++V E F ++P + EIY L+D L
Sbjct: 471 YASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Query: 655 N 655
N
Sbjct: 531 N 531
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 208/433 (48%), Gaps = 11/433 (2%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFY-ARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
KQ+HA +I G +T+ R+++F A + + A +V + P WN +I F R
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 123 NELFVEALSAYRKML--RKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL 180
+ A+S + ML V P TYPSV KA G L G ++H + +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
F+ N ++ MY G L A +F M D V+WN++I +A G +A LF+ M +
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLG 299
N + WN+M G++ G FK AL + +M+ + D MV LNAC+++GA + G
Sbjct: 222 ----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 300 KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHM 359
+ IH + VR F++ V ALI MY +CG + +F+ +K L WN+M+ G A+
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANN 337
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
+ LF ++ G EP+ V+ VL CA + EF + ++ + +
Sbjct: 338 GFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKH 397
Query: 420 WNTLVDMYARSGKVLEAKRVFDSL-TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFK 478
+ +V++ +G + EA+ + ++ D V +++++ G +MA + C K
Sbjct: 398 YTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK--CLKK 455
Query: 479 IKPDHVAMVAVLT 491
+ PD +L+
Sbjct: 456 LDPDETCGYVLLS 468
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 31/242 (12%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFY-------------------------------AR 91
G+QLH VI G + ++ + ++ Y A+
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 92 FNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSV 151
L D A + + + WN +IS FVRN F +AL +R+M K V PD FT S+
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 152 LKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDD 211
L AC L G +H+ I + V AL+ MY K G +E ++F+ P++
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 212 VSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQ 271
WN++I A+ G A LF ++ G+E + + + + H+G A +
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRL 384
Query: 272 MR 273
M+
Sbjct: 385 MK 386
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 21/219 (9%)
Query: 9 LKNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLHA 68
+ FV +G +A F +Q GF+ C + + G+ +H
Sbjct: 230 ISGFVRNGRFKDALDMFREMQEKDVKPD-GFT------MVSLLNACAYLGASEQGRWIHE 282
Query: 69 QVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVE 128
++ F+ N+I++ L+ Y + ++ V E + + WN +I N
Sbjct: 283 YIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEER 342
Query: 129 ALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV------ 182
A+ + ++ R + PD ++ VL A CA EVH+A E + ++
Sbjct: 343 AMDLFSELERSGLEPDSVSFIGVLTA------CAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 183 -HNALVSMYAKFGKLEVARHLFDNMP-ERDDVSWNTIIS 219
+ +V++ G LE A L NMP E D V W++++S
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLS 435
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 211/381 (55%), Gaps = 4/381 (1%)
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQM--RTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
NI WN + G + +G ++ L +M + + D + + L ACS K G I
Sbjct: 97 NIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLI 156
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
H ++ GF V +AL+ MY G L HA LF M + + + AM G+
Sbjct: 157 HVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEA 216
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
+FR+M + G + V + S+L C ++ L+HGK H + ++R L L N
Sbjct: 217 MLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLG-LNLGNA 275
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
+ DMY + + A VF +++RRD ++++++I GYG+ G+ M+ +F+EM K I+P+
Sbjct: 276 ITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPN 335
Query: 483 HVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEII 542
V + VL+AC+H GLV + + F+ M +Y I+P ++HYA +AD RAGLL +A++ +
Sbjct: 336 AVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFL 394
Query: 543 TRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWS 602
MP KP A+ ++ C+++GN +GE A +L+++KP + YY+ +A +Y+AAG +
Sbjct: 395 EDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFD 454
Query: 603 ELAEVRTYMRNLGVKKAPGCA 623
E +R +M+ + K PGC+
Sbjct: 455 EAESLRQWMKEKQISKVPGCS 475
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 211/477 (44%), Gaps = 79/477 (16%)
Query: 77 QNTIMLPRLVSFYARFN-LFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRK 135
N ++ +LV Y++ N LF + V WN++I F R+ +++ + +
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 136 MLRKQVI-PDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFG 194
M R+ + PD+FT P +L+AC + SG +H SLFV +ALV MY G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 195 KLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAG 254
KL AR LFD+MP RD V ++ M G
Sbjct: 184 KLLHARKLFDDMPVRDSV-----------------------------------LYTAMFG 208
Query: 255 GYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDV 313
GY+ G L + +M S LD V MV L AC +GALK GK +HG +R +
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 314 LDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSF-LFRQM 372
N+ NA+ MY +C L +A+ +F M + +I+W++++ G+ +D +SF LF +M
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYG-LDGDVVMSFKLFDEM 327
Query: 373 LHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGK 432
L EG EPN VT VL CA L + +M+ L + ++ D +R+G
Sbjct: 328 LKEGIEPNAVTFLGVLSACAH-GGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGL 386
Query: 433 VLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
+ EA++ + + +KPD M AVL+
Sbjct: 387 LEEAEKFLEDMP----------------------------------VKPDEAVMGAVLSG 412
Query: 493 CSHSGLVAQGQVLFQEMVDDYGIIPR-IEHYACMADLFGRAGLLNKAKEIITRMPYK 548
C G V G+ + +E++ + PR +Y +A L+ AG ++A+ + M K
Sbjct: 413 CKVYGNVEVGERVARELIQ---LKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEK 466
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 17/242 (7%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARF-------NLFDDACIVTESS 105
C G +H + LGF + + LV Y LFDD +
Sbjct: 143 ACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPV----- 197
Query: 106 SSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGV 165
+ + + + +V+ + L+ +R+M D S+L ACG+L G
Sbjct: 198 --RDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGK 255
Query: 166 EVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRG 225
VH L + NA+ MY K L+ A +F NM RD +SW+++I Y G
Sbjct: 256 SVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDG 315
Query: 226 TWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGA---LKLLSQMRTSIHLDHVA 282
+FKLF+ M +EG+E N + + + H G + + +L+ + L H A
Sbjct: 316 DVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYA 375
Query: 283 MV 284
V
Sbjct: 376 SV 377
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 193/333 (57%), Gaps = 9/333 (2%)
Query: 299 GKEIHGHAVRTGFDVLDN--VRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF 356
G+ +H H ++ V + V+ AL+ Y+ CG L A LF+R+ E L TWN +L+ +
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 357 AHMDRVD---EVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
A+ + +D EV LF +M PN +++ +++ CA + G H Y++K
Sbjct: 192 ANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLK-NNL 247
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEE 473
+ +L+D+Y++ G + A++VFD +++RD Y AMIRG + G GQ + +++
Sbjct: 248 TLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKS 307
Query: 474 MCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAG 533
+ + PD V ++ACSHSGLV +G +F M YGI P++EHY C+ DL GR+G
Sbjct: 308 LISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 534 LLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIAN 593
L +A+E I +MP KP +W + +G+ + HG+ GE A LL ++ ++SG Y+L++N
Sbjct: 368 RLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSN 427
Query: 594 MYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVD 626
+YA W+++ + R M++ V K+PG + ++
Sbjct: 428 IYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 176/413 (42%), Gaps = 54/413 (13%)
Query: 54 CINV----NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLE 109
C+N+ SL KQ+HAQ+I++G +T L +L+ + L I+ + +
Sbjct: 12 CLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPSV 71
Query: 110 PLHWNMLISMFVRNELFVE---ALSAYRKMLRKQ---VIPDEFTYPSVLKACGELLDC-- 161
L +N LIS V N + A S Y ++L + V P+EFTYPS+ KA G D
Sbjct: 72 FL-YNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASG--FDAQW 128
Query: 162 ---ASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTII 218
+ H + + FV ALV YA GKL AR
Sbjct: 129 HRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREAR------------------ 170
Query: 219 SCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALK-LLSQMRTSIH 277
LFER++E ++ WNT+ Y ++ + LL MR +
Sbjct: 171 -------------SLFERIREP----DLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR 213
Query: 278 LDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYML 337
+ +++V + +C+++G G H + ++ + V +LI +YS+CG L A +
Sbjct: 214 PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKV 273
Query: 338 FQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANL 397
F M ++ + +NAM+ G A E L++ ++ +G P+ T + C+ +
Sbjct: 274 FDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLV 333
Query: 398 QHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVT 450
G + + + + + LVD+ RSG++ EA+ + + T
Sbjct: 334 DEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT 386
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 268/570 (47%), Gaps = 59/570 (10%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G Q+H +VISLGF N + LV YA L D A + + N+L+ F +
Sbjct: 131 GIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQ 190
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL-- 180
Y +M + V + TY +++ C G ++H V GW++
Sbjct: 191 TGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL--VVKSGWNISN 248
Query: 181 -FVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
FV N LV Y+ G L + F+ +PE+D
Sbjct: 249 IFVANVLVDYYSACGDLSGSMRSFNAVPEKD----------------------------- 279
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-----RTSIHLDHVAMVVGLNACSHIG 294
+I WN++ G+ +L L S+M R SI + LN CS
Sbjct: 280 ------VISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIR----PFMSFLNFCSRNS 329
Query: 295 ALKLGKEIHGHAVRTGFDVLD-NVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
++ GK+IH + ++ GFDV +V++ALI MY +C + ++ +L+Q + L N+++
Sbjct: 330 DIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLM 389
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP-LCARIANLQHGKEF-HCYIMKRE 411
+ H ++ +F M+ EG + VT+++VL L + H HC +K
Sbjct: 390 TSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIK-S 448
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIF 471
+ + + +L+D Y +SG+ +++VFD L + T++I GY G G + +
Sbjct: 449 GYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKML 508
Query: 472 EEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGR 531
EM + + PD V +++VL+ CSHSGLV +G+++F + YGI P + YACM DL GR
Sbjct: 509 REMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGR 568
Query: 532 AGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILI 591
AGL+ KA+ ++ + W++L+ +CRIH N +G AA L+ ++P++ YI +
Sbjct: 569 AGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQV 628
Query: 592 ANMYAAAGCWS------ELAEVRTYMRNLG 615
+ Y G + E+A R MR +G
Sbjct: 629 SKFYFEIGDFEISRQIREIAASRELMREIG 658
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 180/386 (46%), Gaps = 37/386 (9%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAI 171
+N+LIS R + A+ Y +M+ + T+PSVL C + L C G++VH + I
Sbjct: 80 YNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVI 139
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+G G ++FV +ALV +YA ++VA LFD M +R+ N ++ C+ G F
Sbjct: 140 SLG-FGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLF 198
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
+++ RM+ EGV N + + M G CS
Sbjct: 199 EVYLRMELEGVAKNGLTYCYMIRG----------------------------------CS 224
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDN-VRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
H + GK++H V++G+++ + V N L+ YS CGDL + F + EK +I+WN
Sbjct: 225 HDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWN 284
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
+++S A V + LF +M G P+ S L C+R +++Q GK+ HCY++K
Sbjct: 285 SIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKM 344
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNI 470
L + + L+DMY + + + ++ SL + +++ G + + +
Sbjct: 345 GFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEM 404
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHS 496
F M D V + VL A S S
Sbjct: 405 FGLMIDEGTGIDEVTLSTVLKALSLS 430
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 186/434 (42%), Gaps = 41/434 (9%)
Query: 9 LKNFVYHGHLSNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLHA 68
L+ F G F+ +L ++ A + G ++ GC + + GKQLH+
Sbjct: 185 LRCFCQTGESKRLFEVYLRMELEGVAKN-GLTYCYMIR------GCSHDRLVYEGKQLHS 237
Query: 69 QVISLGFDQNTIMLPR-LVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFV 127
V+ G++ + I + LV +Y+ + + + + WN ++S+ +
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGSMGWSLFVHNAL 186
++L + KM P + S L C D SG ++H +++G SL V +AL
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 187 VSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
+ MY K +E + L+ ++P + N++++ G + ++F M +EG ++
Sbjct: 358 IDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE 417
Query: 247 IIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHA 306
+ +T+ LK LS +++ L++C+ +H A
Sbjct: 418 VTLSTV-------------LKALS----------LSLPESLHSCTL---------VHCCA 445
Query: 307 VRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVS 366
+++G+ V +LI Y++ G + +F ++ + ++++G+A +
Sbjct: 446 IKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCV 505
Query: 367 FLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDM 426
+ R+M P+ VTI SVL C+ ++ G+ + + L+ +VD+
Sbjct: 506 KMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDL 565
Query: 427 YARSGKVLEAKRVF 440
R+G V +A+R+
Sbjct: 566 LGRAGLVEKAERLL 579
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 153/375 (40%), Gaps = 41/375 (10%)
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
++ HN + K G L A FD M RD V++N +IS + G A +L+ M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLG 299
G+ + A F L + CS + G
Sbjct: 106 CGLRES-------------ASTFPSVLSV---------------------CSDELFCREG 131
Query: 300 KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHM 359
++H + GF VR+AL+ +Y+ + A LF M ++ L N +L F
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQT 191
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
+ ++ +M EG N +T ++ C+ + GK+ H ++K + +
Sbjct: 192 GESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFV 251
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKI 479
N LVD Y+ G + + R F+++ +D +++ +++ G +L++F +M +
Sbjct: 252 ANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGK 311
Query: 480 KPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA-GLLNKA 538
+P ++ L CS + + G+ + ++ + + + + D++G+ G+ N A
Sbjct: 312 RPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSA 371
Query: 539 KEIITRMPYKPTPAM 553
+ Y+ P +
Sbjct: 372 ------LLYQSLPCL 380
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 2/240 (0%)
Query: 329 GDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVL 388
G+L A+ F M + ++T+N ++SG + L+ +M+ G + T SVL
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 389 PLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDE 448
+C+ + G + HC ++ F + + + LV +YA V A ++FD + R+
Sbjct: 120 SVCSDELFCREGIQVHCRVISL-GFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 449 VTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQE 508
++R + GE + ++ M + + + ++ CSH LV +G+ L
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 509 MVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTV 568
+V I I + D + G L+ + +P K + W +++ C +G+ +
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVIS-WNSIVSVCADYGSVL 297
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 145/547 (26%), Positives = 246/547 (44%), Gaps = 40/547 (7%)
Query: 83 PRLVSFYARFNLFDDACIVTESSSSLEP----LHWNMLISMFVRNELFVEALSAYRKMLR 138
P + ARF +D I + P WN +I + + F LS + ++LR
Sbjct: 40 PYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILR 99
Query: 139 KQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEV 198
PD FTY + + E D +H V +G+ +A+V Y+K G +
Sbjct: 100 SDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVE 159
Query: 199 ARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLH 258
A LF ++P+ D WN +I Y G W + LF MQ G + N + G
Sbjct: 160 ASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGL-- 217
Query: 259 AGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR 318
+D ++V + +H ++ D V
Sbjct: 218 -------------------IDPSLLLVAWS-------------VHAFCLKINLDSHSYVG 245
Query: 319 NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAE 378
AL+ MYSRC + A +F + E L+ +++++G++ E LF ++ G +
Sbjct: 246 CALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKK 305
Query: 379 PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKR 438
P+ V +A VL CA +++ GKE H Y++ R + + + + L+DMY++ G + A
Sbjct: 306 PDCVLVAIVLGSCAELSDSVSGKEVHSYVI-RLGLELDIKVCSALIDMYSKCGLLKCAMS 364
Query: 439 VFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGL 498
+F + ++ V++ ++I G G+ G A F E+ + + PD + A+L C HSGL
Sbjct: 365 LFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGL 424
Query: 499 VAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
+ +GQ +F+ M ++GI P+ EHY M L G AG L +A E + + + L+
Sbjct: 425 LNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALL 484
Query: 559 GACRIHGNTVLGEWAAGKLLEMKPD-HSGYYILIANMYAAAGCWSELAEVRTYMRNLGVK 617
C +H NT L E A + + + S Y ++++N+YA G W E+ +R +
Sbjct: 485 SCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGG 544
Query: 618 KAPGCAW 624
K PG +W
Sbjct: 545 KLPGISW 551
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
G I+ + L +HA + + D ++ + LV+ Y+R AC V S S + +
Sbjct: 216 GLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVA 275
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+ LI+ + R EAL + ++ PD VL +C EL D SG EVH +
Sbjct: 276 CSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVI 335
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
+ + V +AL+ MY+K G L+ A LF +PE++ VS+N++I G AF+
Sbjct: 336 RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFE 395
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLD 279
F + E G+ + I ++ + H+G ++ +M++ ++
Sbjct: 396 KFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIE 442
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 259/537 (48%), Gaps = 42/537 (7%)
Query: 103 ESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLD-C 161
E SL H + LI + ++AL Y + R+ V + P +L+AC ++
Sbjct: 4 EEHLSLGEFHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRV 62
Query: 162 ASGVEVH-KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISC 220
G +H ++I+ G + V ++L+SMY K G + AR +FD MPER+ +WN +I
Sbjct: 63 VLGKLLHSESIKFGVCS-DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGG 121
Query: 221 YASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDH 280
Y S G A LFE E V N + W M GY + A +L +M L +
Sbjct: 122 YMSNGDAVLASGLFE---EISVCRNTVTWIEMIKGYGKRIEIEKARELFERM--PFELKN 176
Query: 281 VAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNV--RNALI-----TMYSRCGDLGH 333
V ++ LG ++ + +++ +NA + + Y R GD+
Sbjct: 177 V----------KAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHE 226
Query: 334 AYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCAR 393
A +F R+ + L+ WN +++G+A D+ F M EG EP+ VT++S+L CA+
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQ 286
Query: 394 IANLQHGKEFHCYIMKR----EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEV 449
L G+E H I R QF + N L+DMYA+ G + A VF+S++ R
Sbjct: 287 SGRLDVGREVHSLINHRGIELNQF-----VSNALIDMYAKCGDLENATSVFESISVRSVA 341
Query: 450 TYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
+MI + G+G+ AL +F M +KPD + +AVLTAC H G + +G +F EM
Sbjct: 342 CCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM 401
Query: 510 VDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVL 569
+ P ++H+ C+ L GR+G L +A ++ M KP + L+GAC++H +T +
Sbjct: 402 -KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEM 460
Query: 570 GEWAAGKLLEMKPDHSGYY-----ILIANMYAAAGCWSELAEVRTYMRNLGVKKAPG 621
E K++E + Y I+N+YA W +R M G++K+PG
Sbjct: 461 AEQVM-KIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPG 516
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 180/385 (46%), Gaps = 17/385 (4%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
GK LH++ I G + ++ L+S Y + A V + WN +I ++
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI--EVGSM-GWS 179
N V A + ++ V + T+ ++K G+ ++ E+ + + E+ ++ WS
Sbjct: 125 NGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWS 181
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
+ ++ +Y K+E AR F+++PE++ W+ ++S Y G EA +F R+
Sbjct: 182 V-----MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV-- 234
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKL 298
+++IWNT+ GY G A+ M+ D V + L+AC+ G L +
Sbjct: 235 --FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDV 292
Query: 299 GKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAH 358
G+E+H G ++ V NALI MY++CGDL +A +F+ + + + N+M+S A
Sbjct: 293 GREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAI 352
Query: 359 MDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL 418
+ E +F M +P+ +T +VL C L G + MK + K +
Sbjct: 353 HGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSE-MKTQDVKPNVK 411
Query: 419 LWNTLVDMYARSGKVLEAKRVFDSL 443
+ L+ + RSGK+ EA R+ +
Sbjct: 412 HFGCLIHLLGRSGKLKEAYRLVKEM 436
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 76 DQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRK 135
++N + ++S Y R +A + + + + WN LI+ + +N +A+ A+
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 136 MLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGK 195
M + PD T S+L AC + G EVH I + + FV NAL+ MYAK G
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 196 LEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGG 255
LE A +F+++ R N++ISC A G EA ++F M+ ++ + I + +
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 256 YLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLD 315
+H G LK+ S+M+T DV
Sbjct: 385 CVHGGFLMEGLKIFSEMKTQ------------------------------------DVKP 408
Query: 316 NVRN--ALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF--AHMD 360
NV++ LI + R G L AY L + M K T L G HMD
Sbjct: 409 NVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMD 457
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 226/462 (48%), Gaps = 13/462 (2%)
Query: 210 DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLL 269
D + N ++ Y A KLF+ M E N++ W ++ GY G + AL +
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEM----CEPNVVSWTSVISGYNDMGKPQNALSMF 118
Query: 270 SQMRTS--IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSR 327
+M + + ACS + ++GK IH +G V ++L+ MY +
Sbjct: 119 QKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGK 178
Query: 328 CGDLGHAYMLFQRMEEKG--LITWNAMLSGFAHMDRVDEVSFLFRQM--LHEGAEPNYVT 383
C D+ A +F M G +++W +M++ +A R E LFR N
Sbjct: 179 CNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFM 238
Query: 384 IASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
+ASV+ C+ + LQ GK H ++ R ++ ++ +L+DMYA+ G + A+++F +
Sbjct: 239 LASVISACSSLGRLQWGKVAHG-LVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRI 297
Query: 444 TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQ 503
++YT+MI G G+ A+ +F+EM +I P++V ++ VL ACSHSGLV +G
Sbjct: 298 RCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGL 357
Query: 504 VLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY--KPTPAMWATLIGAC 561
M + YG++P HY C+ D+ GR G +++A E+ + + +W L+ A
Sbjct: 358 EYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAG 417
Query: 562 RIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPG 621
R+HG + A+ +L++ + YI ++N YA +G W + +R M+ G K
Sbjct: 418 RLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERA 477
Query: 622 CAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGY 663
C+W++ F GD S +GEI + L + MK+ G+
Sbjct: 478 CSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGH 519
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 173/383 (45%), Gaps = 53/383 (13%)
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFN-------LFDDACIVTESSSSLEP--LHWNML 116
LH + LGF +T + LV Y + LFD+ C EP + W +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMC---------EPNVVSWTSV 101
Query: 117 ISMFVRNELFVEALSAYRKMLR-KQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
IS + ALS ++KM + V P+E+T+ SV KAC L + G +H +E+
Sbjct: 102 ISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISG 161
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMP--ERDDVSWNTIISCYASRGTWGEAFKL 233
+ ++ V ++LV MY K +E AR +FD+M R+ VSW ++I+ YA EA +L
Sbjct: 162 LRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIEL 221
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI 293
F +F AL TS + + ++ACS +
Sbjct: 222 FR-------------------------SFNAAL-------TSDRANQFMLASVISACSSL 249
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
G L+ GK HG R G++ V +L+ MY++CG L A +F R+ +I++ +M+
Sbjct: 250 GRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
A + LF +M+ PNYVT+ VL C+ + G E+ + ++
Sbjct: 310 MAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGV 369
Query: 414 KEYLLLWNTLVDMYARSGKVLEA 436
+ +VDM R G+V EA
Sbjct: 370 VPDSRHYTCVVDMLGRFGRVDEA 392
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 138/333 (41%), Gaps = 46/333 (13%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTES--SSSLEPLHWNMLISMF 120
GK +HA++ G +N ++ LV Y + N + A V +S + W +I+ +
Sbjct: 150 GKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAY 209
Query: 121 VRNELFVEALSAYRKMLRKQVIPD---EFTYPSVLKACGELLDCASGVEVHKAIEVGSMG 177
+N EA+ +R + D +F SV+ AC L G H + G
Sbjct: 210 AQNARGHEAIELFRS-FNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYE 268
Query: 178 WSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERM 237
+ V +L+ MYAK G L A +F + +S+ ++I A G A KLF+ M
Sbjct: 269 SNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM 328
Query: 238 QEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALK 297
+AG I+ ++V ++ L+ACSH G +
Sbjct: 329 --------------VAG--------------------RINPNYVTLLGVLHACSHSGLVN 354
Query: 298 LGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLFQRME---EKGLITWNAM 352
G E + + + V+ + R ++ M R G + AY L + +E E+G + W A+
Sbjct: 355 EGLE-YLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGAL 413
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIA 385
LS RV+ VS ++++ + IA
Sbjct: 414 LSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIA 446
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 203/378 (53%), Gaps = 10/378 (2%)
Query: 280 HVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDN-VRNALITMYSRCGDLGHAYMLF 338
H +V L AC +GK+IH V+ G + D+ V+ ++ +Y L A +F
Sbjct: 120 HFLIVACLKAC----FFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVF 175
Query: 339 QRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQ 398
+ + ++ W+ +++G+ E +FR+ML +G EP+ ++ + L CA++ L
Sbjct: 176 DEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALA 235
Query: 399 HGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGY 458
GK H ++ K+ + + + LVDMYA+ G + A VF LTRR+ ++ A+I GY
Sbjct: 236 QGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGY 295
Query: 459 GMKGEGQMALNIFEEMCKFK-IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
G + A+ E + + IKPD V ++ VL AC+H G + +G+ + + M Y I P
Sbjct: 296 AAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITP 355
Query: 518 RIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKL 577
+ EHY+C+ DL RAG L+ A +I +MP KP ++W L+ CR H N LGE A L
Sbjct: 356 KHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNL 415
Query: 578 LEMKP----DHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSP 633
L+++ + + ++N+Y + E ++VR + GV+K PG + ++V G +
Sbjct: 416 LDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTK 475
Query: 634 FFVGDTSNPHAGEIYPLM 651
F GD S+P+ +I+ ++
Sbjct: 476 FVSGDVSHPNLLQIHTVI 493
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 37/307 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLG-FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL 111
C+ S GKQ+H V+ G F ++ + ++ Y L DA V + + +
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVV 184
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
W++L++ +VR L E L +R+ML K + PDEF+ + L AC ++ A G +H+ +
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 172 EVGS-MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ S + +FV ALV MYAK G +E A +F + R+ SW +I YA+ G +A
Sbjct: 245 KKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKA 304
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
ER++ E I D V ++ L AC
Sbjct: 305 MTCLERLERED---------------------------------GIKPDSVVLLGVLAAC 331
Query: 291 SHIGALKLGKE-IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLIT- 348
+H G L+ G+ + R + ++ + R G L A L ++M K L +
Sbjct: 332 AHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASV 391
Query: 349 WNAMLSG 355
W A+L+G
Sbjct: 392 WGALLNG 398
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 1/191 (0%)
Query: 375 EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVL 434
E P+Y+T ++ C + GK+ HC+++K F + ++ +Y +L
Sbjct: 110 EDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLL 169
Query: 435 EAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
+A++VFD + + D V + ++ GY G G L +F EM ++PD ++ LTAC+
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 495 HSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMW 554
G +AQG+ + + + I + + D++ + G + A E+ ++ + + W
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFS-W 288
Query: 555 ATLIGACRIHG 565
A LIG +G
Sbjct: 289 AALIGGYAAYG 299
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 203/378 (53%), Gaps = 10/378 (2%)
Query: 280 HVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLD-NVRNALITMYSRCGDLGHAYMLF 338
H +V L AC +GK+IH V+ G + D +V+ ++ +Y L A +F
Sbjct: 120 HFLIVACLKAC----FFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVF 175
Query: 339 QRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQ 398
+ + ++ W+ +++G+ E +F++ML G EP+ ++ + L CA++ L
Sbjct: 176 DEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALA 235
Query: 399 HGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGY 458
GK H ++ K+ + + + LVDMYA+ G + A VF+ LTRR+ ++ A+I GY
Sbjct: 236 QGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGY 295
Query: 459 GMKGEGQMALNIFEEMCKFK-IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
G + A + + + IKPD V ++ VL AC+H G + +G+ + + M YGI P
Sbjct: 296 AAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITP 355
Query: 518 RIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKL 577
+ EHY+C+ DL RAG L+ A ++I +MP KP ++W L+ CR H N LGE A L
Sbjct: 356 KHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNL 415
Query: 578 LEMKP----DHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSP 633
L+++ + + ++N+Y + E +VR + G++K PG + ++V G +
Sbjct: 416 LDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTK 475
Query: 634 FFVGDTSNPHAGEIYPLM 651
F GD S+P+ +I+ L+
Sbjct: 476 FVSGDVSHPNLLQIHTLI 493
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 136/309 (44%), Gaps = 41/309 (13%)
Query: 53 GCINVNSLSPGKQLHAQVISLG-FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL 111
C+ S GKQ+H V+ G F + + ++ Y L DA V + + +
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 112 HWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAI 171
W++L++ +VR L E L +++ML + + PDEF+ + L AC ++ A G +H+ +
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 172 EVGSMGW---SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+ W +FV ALV MYAK G +E A +F+ + R+ SW +I YA+ G
Sbjct: 245 K--KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAK 302
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN 288
+A +R++ E I D V ++ L
Sbjct: 303 KATTCLDRIERED---------------------------------GIKPDSVVLLGVLA 329
Query: 289 ACSHIGALKLGKE-IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
AC+H G L+ G+ + R G + ++ + R G L A L ++M K L
Sbjct: 330 ACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLA 389
Query: 348 T-WNAMLSG 355
+ W A+L+G
Sbjct: 390 SVWGALLNG 398
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 8/246 (3%)
Query: 375 EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVL 434
E P+Y+T ++ C + GK+ HC+++K F + ++ +Y +
Sbjct: 110 EDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLF 169
Query: 435 EAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
+A++VFD + + D V + ++ GY G G L +F+EM I+PD ++ LTAC+
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACA 229
Query: 495 HSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMW 554
G +AQG+ + + + I + + D++ + G + A E+ ++ + + W
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFS-W 288
Query: 555 ATLIGACRIHGNTVLGEWAAGKLLE---MKPDHSGYYILIANMYAAAGCWSELAEVRTYM 611
A LIG +G ++ +KPD +++ + AA L E RT +
Sbjct: 289 AALIGGYAAYGYAKKATTCLDRIEREDGIKPDS----VVLLGVLAACAHGGFLEEGRTML 344
Query: 612 RNLGVK 617
N+ +
Sbjct: 345 ENMEAR 350
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 186/347 (53%), Gaps = 5/347 (1%)
Query: 319 NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLH-EGA 377
N +I + G+ G A + + ++ +ITWN M+ G+ + +E + ML
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 378 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAK 437
+PN + AS L CAR+ +L H K H +M + +L + LVD+YA+ G + ++
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHS-LMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 438 RVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSG 497
VF S+ R D + AMI G+ G A+ +F EM + PD + + +LT CSH G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 498 LVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATL 557
L+ +G+ F M + I P++EHY M DL GRAG + +A E+I MP +P +W +L
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 558 IGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVK 617
+ + R + N LGE A L + K SG Y+L++N+Y++ W +VR M G++
Sbjct: 341 LSSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 618 KAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
KA G +W++ GG F GDTS+ IY +++GL + K G++
Sbjct: 398 KAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFV 444
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 10/261 (3%)
Query: 215 NTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR- 273
N II G G A K+ ++ N+I WN M GGY+ ++ ALK L M
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQ----NVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 274 -TSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLG 332
T I + + L AC+ +G L K +H + +G ++ + +AL+ +Y++CGD+G
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIG 217
Query: 333 HAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA 392
+ +F ++ + WNAM++GFA E +F +M E P+ +T +L C+
Sbjct: 218 TSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCS 277
Query: 393 RIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-TRRDEVTY 451
L+ GKE+ + +R + L + +VD+ R+G+V EA + +S+ D V +
Sbjct: 278 HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIW 337
Query: 452 TAMI---RGYGMKGEGQMALN 469
+++ R Y G++A+
Sbjct: 338 RSLLSSSRTYKNPELGEIAIQ 358
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 159/377 (42%), Gaps = 75/377 (19%)
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYARFN--------------LFDDAC---IVTES--- 104
Q HAQ+ LG+ +L V+ Y R N L C ++ ES
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMK 110
Query: 105 -------------SSSLEPLHWNMLISMFVRNELFVEALSAYRKMLR-KQVIPDEFTYPS 150
+S + WN++I +VRN + EAL A + ML + P++F++ S
Sbjct: 111 IGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFAS 170
Query: 151 VLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERD 210
L AC L D VH + + + + +ALV +YAK G + +R +F ++ +R+
Sbjct: 171 SLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSV-KRN 229
Query: 211 DVS-WNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLL 269
DVS WN +I+ +A+ G EA ++F M+ E V
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSP------------------------- 264
Query: 270 SQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRN--ALITMYSR 327
D + + L CSH G L+ GKE G R F + + + A++ + R
Sbjct: 265 ---------DSITFLGLLTTCSHCGLLEEGKEYFGLMSRR-FSIQPKLEHYGAMVDLLGR 314
Query: 328 CGDLGHAYMLFQRME-EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIAS 386
G + AY L + M E ++ W ++LS + + E+ + Q L + +YV +++
Sbjct: 315 AGRVKEAYELIESMPIEPDVVIWRSLLSS-SRTYKNPELGEIAIQNLSKAKSGDYVLLSN 373
Query: 387 VLPLCARIANLQHGKEF 403
+ + + Q +E
Sbjct: 374 IYSSTKKWESAQKVREL 390
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 240/516 (46%), Gaps = 30/516 (5%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNML 116
V L KQLH G D ++ L+S Y + A + + + S + + WN +
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACG--ELLDCASGVEVHKAIEVG 174
I ++E ++AL + M P++ TY SVL +LL C G ++H +
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSC--GRQIHGMLIKN 345
Query: 175 SMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLF 234
+ + NAL+ YAK G LE +R FD + +++ V WN ++S YA++ LF
Sbjct: 346 GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG-PICLSLF 404
Query: 235 ERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMV-VGLNACSHI 293
+M + G ++T ALK S T + H +V +G ++
Sbjct: 405 LQMLQMGFRPTEYTFST-------------ALK--SCCVTELQQLHSVIVRMGYEDNDYV 449
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVR--------NALITMYSRCGDLGHAYMLFQRMEEKG 345
+ + + +LD N + +YSR G + L +E+
Sbjct: 450 LSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPD 509
Query: 346 LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHC 405
++WN ++ + D +EV LF+ ML P+ T S+L LC+++ +L G H
Sbjct: 510 TVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHG 569
Query: 406 YIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQ 465
I K + + N L+DMY + G + +VF+ ++ +T+TA+I G+ G GQ
Sbjct: 570 LITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQ 629
Query: 466 MALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACM 525
AL F+E KPD V+ +++LTAC H G+V +G LFQ+M DYG+ P ++HY C
Sbjct: 630 EALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCA 688
Query: 526 ADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGAC 561
DL R G L +A+ +I MP+ +W T + C
Sbjct: 689 VDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 136/564 (24%), Positives = 232/564 (41%), Gaps = 84/564 (14%)
Query: 63 GKQLHAQVISLG-FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFV 121
G QLH + G F + + L+ Y R +L + A V E WN ++S+
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 122 RNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLF 181
E + +R+++R E ++ VLK + D ++H + + +
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251
Query: 182 VHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEG 241
V N+L+S Y K G +A +F + D VSWN II A +A KLF M E G
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 242 VEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKE 301
N G Y+ ++LLS G++
Sbjct: 312 FSPN-------QGTYVSVLGVSSLVQLLS---------------------------CGRQ 337
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDR 361
IHG ++ G + + NALI Y++CG+L + + F + +K ++ WNA+LSG+A+ D
Sbjct: 338 IHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG 397
Query: 362 VDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQH--------GKEFHCYIM----- 408
+S LF QML G P T ++ L C + LQ G E + Y++
Sbjct: 398 PICLS-LFLQMLQMGFRPTEYTFSTALKSCC-VTELQQLHSVIVRMGYEDNDYVLSSLMR 455
Query: 409 ---KREQFKEYLLL--W----------NTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTA 453
K + + LLL W N + +Y+R G+ E+ ++ +L + D V++
Sbjct: 456 SYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNI 515
Query: 454 MIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDY 513
I + + +F+ M + I+PD V++L+ CS + G + +
Sbjct: 516 AIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI-------H 568
Query: 514 GIIPRIEHYAC--------MADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIH- 564
G+I + + ++C + D++G+ G + ++ K W LI IH
Sbjct: 569 GLITKTD-FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREK-NLITWTALISCLGIHG 626
Query: 565 -GNTVLGEWAAGKLLEMKPDHSGY 587
G L ++ L KPD +
Sbjct: 627 YGQEALEKFKETLSLGFKPDRVSF 650
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 202/480 (42%), Gaps = 106/480 (22%)
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
++V N ++S+Y K G++ +A +FD MPER+ VS+NTII Y+ G +A+ +F M+
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 240 EGVEMN---------IIIWNTMAGGYLHAGNFK------------------GALKLL--- 269
G N + AG LH + K G L LL
Sbjct: 109 FGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMA 168
Query: 270 ---------SQMRTSIHL------------------DHVAMVVGLNACSHIGALK----- 297
+ T H+ + V M L S +G LK
Sbjct: 169 EQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCV 228
Query: 298 ----LGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
+ K++H A + G D +V N+LI+ Y +CG+ A +FQ +++WNA++
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAII 288
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
A + + LF M G PN T SVL + + + L G++ H ++K
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK-NGC 347
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEE 473
+ ++L N L+D YA+ G + +++ FD + ++ V + A++ GY K +G + L++F +
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQ 406
Query: 474 MCKFKIKPDHVAMVAVLTACS-------HSGLVAQGQVLFQEMVDDYGIIPRIEHYA--- 523
M + +P L +C HS +V G +++ +DY + + YA
Sbjct: 407 MLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMG---YED--NDYVLSSLMRSYAKNQ 461
Query: 524 ----------------------CMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGAC 561
+A ++ R G +++ ++I+ + +P W I AC
Sbjct: 462 LMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 277 HLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHA 334
H D V + LN C + K +H ++ +L V N +I++Y + G++ A
Sbjct: 11 HNDRVVSL--LNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLA 68
Query: 335 YMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARI 394
+F +M E+ +++N ++ G++ VD+ +F +M + G PN T++ +L CA +
Sbjct: 69 GKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASL 127
Query: 395 ANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAM 454
+++ G + H +K F + L+ +Y R + A++VF+ + + T+ M
Sbjct: 128 -DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHM 186
Query: 455 IRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
+ G +G + + F E+ + + + VL S
Sbjct: 187 MSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 384 IASVLPLCARIANLQHGKEFHCY-IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDS 442
+ S+L +C + + K H I + + + N ++ +Y + G+V A +VFD
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 443 LTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQG 502
+ R++V++ +I+GY G+ A +F EM F P+ + V+ L +C+ + A
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQ-STVSGLLSCASLDVRAGT 133
Query: 503 QVLFQEMVDDYGIIPRIEHY-ACMADLFGRAGLLNKAKEIITRMPYK 548
Q+ + YG+ C+ L+GR LL A+++ MP+K
Sbjct: 134 QL--HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 138/475 (29%), Positives = 234/475 (49%), Gaps = 41/475 (8%)
Query: 212 VSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQ 271
VS S +S G A+K ++ + WN + G+ ++ N + ++ + Q
Sbjct: 43 VSQTLSFSALSSSGDVDYAYKFLSKLSDPPN----YGWNFVIRGFSNSRNPEKSISVYIQ 98
Query: 272 M-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTG-------------------- 310
M R + DH+ + + S + KLG +H V++G
Sbjct: 99 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 158
Query: 311 -------FDVLDNVR----NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHM 359
FD + + N+++ Y++ GD+ A ++F M E+ ++TW++M+ G+
Sbjct: 159 QASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKR 218
Query: 360 DRVDEVSFLFRQMLHEGA-EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL 418
++ +F QM+ G+ + N VT+ SV+ CA + L GK H YI+ ++
Sbjct: 219 GEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILD-VHLPLTVI 277
Query: 419 LWNTLVDMYARSGKVLEAKRVF--DSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK 476
L +L+DMYA+ G + +A VF S+ D + + A+I G G + +L +F +M +
Sbjct: 278 LQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRE 337
Query: 477 FKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLN 536
KI PD + + +L ACSH GLV + F+ + + G P+ EHYACM D+ RAGL+
Sbjct: 338 SKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVK 396
Query: 537 KAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYA 596
A + I+ MP KPT +M L+ C HGN L E KL+E++P + G Y+ +AN+YA
Sbjct: 397 DAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYA 456
Query: 597 AAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLM 651
+ +R M GVKK G + +D+ G F D ++ H+ +IY ++
Sbjct: 457 INKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 197/387 (50%), Gaps = 15/387 (3%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFD-DACIVTESSSSLEPLH-WNM 115
S+S ++H +I+LG + + + +SF A + D D S S P + WN
Sbjct: 19 KSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNF 78
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
+I F + +++S Y +MLR ++PD TYP ++K+ L + G +H ++
Sbjct: 79 VIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG 138
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ W LF+ N L+ MY F AR LFD MP ++ V+WN+I+ YA G A +F+
Sbjct: 139 LEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFD 198
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT--SIHLDHVAMVVGLNACSHI 293
M E +++ W++M GY+ G + AL++ QM S + V MV + AC+H+
Sbjct: 199 EMSER----DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQR--MEEKGLITWNA 351
GAL GK +H + + + ++ +LI MY++CG +G A+ +F R ++E + WNA
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR- 410
++ G A + E LF +M +P+ +T +L C+ ++ F + +
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESG 374
Query: 411 -EQFKEYLLLWNTLVDMYARSGKVLEA 436
E E+ + +VD+ +R+G V +A
Sbjct: 375 AEPKSEH---YACMVDVLSRAGLVKDA 398
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 40/264 (15%)
Query: 77 QNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKM 136
+N + ++ YA+ A +V + S + + W+ +I +V+ + +AL + +M
Sbjct: 172 KNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM 231
Query: 137 LR-KQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGK 195
+R +E T SV+ AC L G VH+ I + ++ + +L+ MYAK G
Sbjct: 232 MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGS 291
Query: 196 LEVARHLF--DNMPERDDVSWNTIISCYASRGTWGEAFKLFERM---------------- 237
+ A +F ++ E D + WN II AS G E+ +LF +M
Sbjct: 292 IGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLL 351
Query: 238 -------------------QEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL 278
+E G E + M AG K A +S+M I
Sbjct: 352 AACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM--PIKP 409
Query: 279 DHVAMVVGLNACSHIGALKLGKEI 302
+ LN C + G L+L + +
Sbjct: 410 TGSMLGALLNGCINHGNLELAETV 433
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 174/312 (55%), Gaps = 6/312 (1%)
Query: 319 NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAE 378
N LI + ++ A LF M + L++WN+++SG+A M+ E LF +M+ G +
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 379 PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKR 438
P+ V I S L CA+ + Q GK H Y ++ F + L LVD YA+ G + A
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLA-TGLVDFYAKCGFIDTAME 305
Query: 439 VFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGL 498
+F+ + + T+ AMI G M G G++ ++ F +M IKPD V ++VL CSHSGL
Sbjct: 306 IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGL 365
Query: 499 VAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY----KPTPAMW 554
V + + LF +M Y + ++HY CMADL GRAGL+ +A E+I +MP + W
Sbjct: 366 VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 555 ATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYM-RN 613
+ L+G CRIHGN + E AA ++ + P+ G Y ++ MYA A W E+ +VR + R+
Sbjct: 426 SGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRD 485
Query: 614 LGVKKAPGCAWV 625
VKK G + V
Sbjct: 486 KKVKKNVGFSKV 497
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 195/434 (44%), Gaps = 45/434 (10%)
Query: 65 QLHAQVISLG-----FDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISM 119
Q HAQ I+ G F QN++ +A LF I +S+S E + + +
Sbjct: 22 QFHAQFITSGRISNDFKQNSV--------FANV-LFAITSISPSASASKEVVSYATSVFR 72
Query: 120 FVRN-ELFV-------------EALSAYR---KMLRKQVIPDEFTYPSVLKACGELL--D 160
F+ N F +LS+ R +M R+ V PD T+P V KAC D
Sbjct: 73 FITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGD 132
Query: 161 CASGVEVH-KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIIS 219
+H +A+ G + LF N L+ +Y+ ++ A LFD P+RD V++N +I
Sbjct: 133 LTLVKTLHCQALRFGLLS-DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLID 191
Query: 220 CYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHL 278
A +LF+ M +++ WN++ GY + + A+KL +M +
Sbjct: 192 GLVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKP 247
Query: 279 DHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLF 338
D+VA+V L+AC+ G + GK IH + R + + L+ Y++CG + A +F
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF 307
Query: 339 QRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQ 398
+ +K L TWNAM++G A + FR+M+ G +P+ VT SVL C+ +
Sbjct: 308 ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVD 367
Query: 399 HGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-----TRRDEVTYTA 453
+ + + + + D+ R+G + EA + + + R + ++
Sbjct: 368 EARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSG 427
Query: 454 MIRGYGMKGEGQMA 467
++ G + G ++A
Sbjct: 428 LLGGCRIHGNIEIA 441
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 50/257 (19%)
Query: 368 LFRQMLHEGAEPNYVTIASVLPLCARIAN--LQHGKEFHCYIMK---------------- 409
F +M P++ T V CA N L K HC ++
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 410 --------------REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMI 455
E + ++ +N L+D ++ +++ A+ +FDS+ RD V++ ++I
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 456 RGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGI 515
GY + A+ +F+EM +KPD+VA+V+ L+AC+ SG +G+ + DY
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA-----IHDYTK 276
Query: 516 IPR--IEHYAC--MADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGE 571
R I+ + + D + + G ++ A EI K T W +I +HGN GE
Sbjct: 277 RKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDK-TLFTWNAMITGLAMHGN---GE 332
Query: 572 WAAGKLLEM-----KPD 583
+M KPD
Sbjct: 333 LTVDYFRKMVSSGIKPD 349
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 201/413 (48%), Gaps = 36/413 (8%)
Query: 250 NTMAGGYLHAGNFKGALKL-LSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVR 308
N + YL + + K AL +R D V ++ + GK HG A++
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 309 TGFDVLDNVRNALITMYSRCG-------------------------------DLGHAYML 337
G D + V+N+L+ MY+ CG D+ A+ L
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 338 FQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANL 397
F M +K +I+WN M+S + + LFR+M+ G + N T+ +L C R A L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 398 QHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRG 457
+ G+ H ++ R +++ L+DMY + +V A+R+FDSL+ R++VT+ MI
Sbjct: 267 KEGRSVHASLI-RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 458 YGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
+ + G + L +FE M ++PD V V VL C+ +GLV+QGQ + MVD++ I P
Sbjct: 326 HCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Query: 518 RIEHYACMADLFGRAGLLNKAKEIITRMP---YKPTPAMWATLIGACRIHGNTVLGEWAA 574
H CMA+L+ AG +A+E + +P P WA L+ + R GN LGE A
Sbjct: 386 NFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIA 445
Query: 575 GKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDV 627
L+E P + YY L+ N+Y+ G W ++ VR ++ + + PGC VD+
Sbjct: 446 KSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDL 498
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 192/394 (48%), Gaps = 13/394 (3%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW-NML 116
NS++ Q+HA++I+ G ++ RL+ +RF D+ S+ L+ N +
Sbjct: 33 NSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFG---DSSYTVSIYRSIGKLYCANPV 89
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCA-SGVEVH-KAIEVG 174
++ + +AL Y +LR +PD +T+ S++ +C E C SG H +AI+ G
Sbjct: 90 FKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLI-SCIEKTCCVDSGKMCHGQAIKHG 148
Query: 175 SMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLF 234
L V N+L+ MY G L++A+ LF +P+RD VSWN+II+ G A KLF
Sbjct: 149 C-DQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLF 207
Query: 235 ERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHI 293
+ M ++ NII WN M YL A N ++ L +M R + +V+ LNAC
Sbjct: 208 DEMPDK----NIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
LK G+ +H +RT + + ALI MY +C ++G A +F + + +TWN M+
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI 323
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
R + LF M++ P+ VT VL CAR + G+ ++ ++ Q
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQI 383
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD 447
K + ++Y+ +G EA+ +L D
Sbjct: 384 KPNFGHQWCMANLYSSAGFPEEAEEALKNLPDED 417
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 232/454 (51%), Gaps = 25/454 (5%)
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNM------PERDDVSWNTIISCYASRGTWGEAFKLF 234
F HN+++ YA EVA +F M P D S+ ++ A+ + E ++
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLLGPVFP--DKYSFTFVLKACAAFCGFEEGRQIH 163
Query: 235 ERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIG 294
+ G+ ++ + NT+ Y +G F+ A K+L +M D V+ L+A G
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR---DAVSWNSLLSAYLEKG 220
Query: 295 ALKLGKEIHGHAVRTGFDVLD--NVR--NALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+ R FD ++ NV N +I+ Y+ G + A +F M + +++WN
Sbjct: 221 LVD--------EARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWN 272
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAE-PNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
AM++ +AH+ +EV +F +ML + E P+ T+ SVL CA + +L G+ H YI K
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALN 469
E L LVDMY++ GK+ +A VF + ++RD T+ ++I + G G+ AL
Sbjct: 333 HGIEIEGFLA-TALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALE 391
Query: 470 IFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLF 529
IF EM KP+ + + VL+AC+H G++ Q + LF+ M Y + P IEHY CM DL
Sbjct: 392 IFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLL 451
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYI 589
GR G + +A+E++ +P + +L+GAC+ G E A +LLE+ S Y
Sbjct: 452 GRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYA 511
Query: 590 LIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCA 623
++N+YA+ G W ++ + R MR V ++ A
Sbjct: 512 QMSNLYASDGRWEKVIDGRRNMRAERVNRSLDVA 545
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 198/417 (47%), Gaps = 32/417 (7%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYA---RFNLFDDACIVTESSSSLEPLHWNM 115
SL+ +Q HA ++ G +T +LV+F A A + S N
Sbjct: 51 SLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNS 110
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
+I + + AL+ +R+ML V PD++++ VLKAC G ++H
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
+ +FV N LV++Y + G E+AR + D MP RD VSWN+++S Y +G EA LF+
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFD 230
Query: 236 RMQEEGVE---------------------------MNIIIWNTMAGGYLHAGNFKGALKL 268
M+E VE +++ WN M Y H G + L++
Sbjct: 231 EMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEV 290
Query: 269 LSQM--RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYS 326
++M ++ D +V L+AC+ +G+L G+ +H + + G ++ + AL+ MYS
Sbjct: 291 FNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYS 350
Query: 327 RCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIAS 386
+CG + A +F+ ++ + TWN+++S + + +F +M++EG +PN +T
Sbjct: 351 KCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIG 410
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
VL C + L ++ + + + + + +VD+ R GK+ EA+ + + +
Sbjct: 411 VLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 246/495 (49%), Gaps = 63/495 (12%)
Query: 143 PD--EFTYPSVLKACGELLDCASGVEVH-----KAIEVGSMGWSLFVHNALVSMYAKFGK 195
PD T+ VL AC L +G +VH + E G++ AL+ MY+K+G
Sbjct: 80 PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS-----KTALIDMYSKYG- 133
Query: 196 LEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGG 255
HL D++ ++FE ++E+ +++ WN + G
Sbjct: 134 -----HLVDSV-------------------------RVFESVEEK----DLVSWNALLSG 159
Query: 256 YLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVL 314
+L G K AL + + M R + + + + C+ + L+ GK++H V TG D++
Sbjct: 160 FLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLV 219
Query: 315 DNVRNALITMYSRCGDLGHAYMLFQRME-EKGLITWNAMLSGFAHMDRVDEVSFLFRQML 373
+ A+I+ YS G + A ++ + + N+++SG E L +
Sbjct: 220 -VLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ- 277
Query: 374 HEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKV 433
PN ++S L C+ ++L GK+ HC + R F L N L+DMY + G++
Sbjct: 278 ----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVAL-RNGFVSDSKLCNGLMDMYGKCGQI 332
Query: 434 LEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK--FKIKPDHVAMVAVLT 491
++A+ +F ++ + V++T+MI Y + G+G AL IF EMC+ + P+ V + V++
Sbjct: 333 VQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVIS 392
Query: 492 ACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM---PYK 548
AC+H+GLV +G+ F M + Y ++P EHY C D+ +AG + ++ RM +
Sbjct: 393 ACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQ 452
Query: 549 PTP-AMWATLIGACRIHGNTVLGEWAAGKLL-EMKPDHSGYYILIANMYAAAGCWSELAE 606
P A+W ++ AC ++ + GE+ A +L+ E P+++ Y+L++N YAA G W + E
Sbjct: 453 SIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEE 512
Query: 607 VRTYMRNLGVKKAPG 621
+R ++N G+ K G
Sbjct: 513 LRGKLKNKGLVKTAG 527
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 209/461 (45%), Gaps = 85/461 (18%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+Q+HA +I G + TI L+ Y+++ D+ V ES + + WN L+S F+R
Sbjct: 103 GRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR 162
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
N EAL + M R++V EFT SV+K C L G +VH + V
Sbjct: 163 NGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG------- 215
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNT-IISCYASRGTWGEAFKLFERMQEEG 241
RD V T +IS Y+S G EA K++ +
Sbjct: 216 --------------------------RDLVVLGTAMISFYSSVGLINEAMKVYNSLN--- 246
Query: 242 VEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKE 301
V + ++ N++ G + N+K A L+S+ R ++ + + L CS L +GK+
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRV----LSSSLAGCSDNSDLWIGKQ 302
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFA-HMD 360
IH A+R GF + N L+ MY +CG + A +F+ + K +++W +M+ +A + D
Sbjct: 303 IHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGD 362
Query: 361 RVDEVSFLFRQMLHEGAE--PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL 418
V + +FR+M EG+ PN VT V+ CA ++ GKE C+ M +E+++ L
Sbjct: 363 GVKALE-IFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKE--CFGMMKEKYR---L 416
Query: 419 LWNT-----LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEE 473
+ T +D+ +++G+ E R+ + + D + I
Sbjct: 417 VPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAI------------------ 458
Query: 474 MCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYG 514
VAVL+ACS + + +G+ + + ++++ G
Sbjct: 459 ------------WVAVLSACSLNMDLTRGEYVARRLMEETG 487
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 171/358 (47%), Gaps = 15/358 (4%)
Query: 213 SWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM 272
S N ++ C R A LF+ + + ++ N+ +L +GN L L Q+
Sbjct: 20 STNLVLRCVFIRNFATHADHLFDELPQR----DLSSLNSQLSSHLRSGNPNDTLALFLQI 75
Query: 273 -RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDL 331
R S L L ACS + + G+++H ++ G + + ALI MYS+ G L
Sbjct: 76 HRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHL 135
Query: 332 GHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLC 391
+ +F+ +EEK L++WNA+LSGF + E +F M E E + T++SV+ C
Sbjct: 136 VDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTC 195
Query: 392 ARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-TRRDEVT 450
A + LQ GK+ H ++ ++ ++L ++ Y+ G + EA +V++SL DEV
Sbjct: 196 ASLKILQQGKQVHAMVVV--TGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVM 253
Query: 451 YTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV 510
++I G + A + + +P+ + + L CS + + G+ + +
Sbjct: 254 LNSLISGCIRNRNYKEAFLLMS-----RQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVAL 308
Query: 511 DDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTV 568
+ G + + + D++G+ G + +A+ I +P K + W ++I A ++G+ V
Sbjct: 309 RN-GFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVS-WTSMIDAYAVNGDGV 364
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 151/345 (43%), Gaps = 52/345 (15%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTES-SSSLEPLH 112
C ++ L GKQ+HA V+ G D ++ ++SFY+ L ++A V S + + +
Sbjct: 195 CASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVM 253
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAI 171
N LIS +RN + EA +L + P+ S L C + D G ++H A+
Sbjct: 254 LNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVAL 308
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
G + S N L+ MY K G++ AR +F +P + VSW ++I YA G +A
Sbjct: 309 RNGFVSDSKLC-NGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKAL 367
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
++F M EEG + + + V +V ++AC+
Sbjct: 368 EIFREMCEEG--------------------------------SGVLPNSVTFLVVISACA 395
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRN--ALITMYSRCGDLGHAYMLFQRMEEKG---- 345
H G +K GKE G ++ + ++ + I + S+ G+ + L +RM E
Sbjct: 396 HAGLVKEGKECFG-MMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSI 454
Query: 346 -LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN---YVTIAS 386
W A+LS + + ++ R+++ E N YV +++
Sbjct: 455 PCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSN 499
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 151/538 (28%), Positives = 245/538 (45%), Gaps = 102/538 (18%)
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLI------- 117
Q+HAQ+I LPR + +R I++ + P ++ LI
Sbjct: 24 QIHAQLIVFN------SLPRQSYWASR--------IISCCTRLRAPSYYTRLIFDSVTFP 69
Query: 118 SMFVRNELFV---------EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH 168
++FV N +F + L Y + R ++PD F++P V+K+ G G+
Sbjct: 70 NVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILFQ 124
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
+E +V N ++ MY K +E AR +FD + +R WN +IS Y G
Sbjct: 125 ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKE 184
Query: 229 EAFKLFERMQEEGV---------------------------EMNIIIWNTMAGGYLHAGN 261
EA KLF+ M E V E +++ WN M GY G
Sbjct: 185 EACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGF 244
Query: 262 FKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGK-------------------- 300
+ AL+L + M R + + V+ ++ACS L +
Sbjct: 245 TEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTA 304
Query: 301 --EIHG-----HAVRTGFDVLDNVRN-----ALITMYSRCGDLGHAYMLFQRMEEKGLIT 348
++H + R F+ L RN A+I+ Y+R GD+ A LF M ++ +++
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVS 364
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
WN++++G+AH + F M+ G ++P+ VT+ SVL C +A+L+ G YI
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI 424
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
++ Q K + +L+ MYAR G + EAKRVFD + RD V+Y + + G+G
Sbjct: 425 -RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVET 483
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACM 525
LN+ +M I+PD V +VLTAC+ +GL+ +GQ +F+ + + P +HYACM
Sbjct: 484 LNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/577 (25%), Positives = 265/577 (45%), Gaps = 44/577 (7%)
Query: 19 SNAFKSFLHIQHHAAASSPGFSHXXXXXXXXXXXGCINVNSLSPGKQLHAQVISLGFDQN 78
S F S L + AS +H C + +S G ++H VI GF+ N
Sbjct: 102 SQEFASALSLFEEMMASG---THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGN 158
Query: 79 TIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLR 138
+++ L Y++ F +AC + S + + + W M+IS V + EAL Y +M++
Sbjct: 159 SVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK 218
Query: 139 KQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEV 198
V P+EFT+ +L A L G +H I V + ++ + +LV Y++F K+E
Sbjct: 219 AGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 199 ARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLH 258
A + ++ E+D W +++S + EA F M+ G++ N ++ +
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAI------ 331
Query: 259 AGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR 318
L+ CS + +L GK+IH ++ GF+ +V
Sbjct: 332 ----------------------------LSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 319 NALITMYSRC-GDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGA 377
NAL+ MY +C A +F M +++W ++ G V + L +M+
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 378 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAK 437
EPN VT++ VL C+++ +++ E H Y+++R E +++ N+LVD YA S KV A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGE-MVVGNSLVDAYASSRKVDYAW 482
Query: 438 RVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSG 497
V S+ RRD +TYT+++ + G+ +MAL++ M I+ D +++ ++A ++ G
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 498 LVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATL 557
+ G+ L V G + D++ + G L AK++ + P W L
Sbjct: 543 ALETGKHLHCYSVKS-GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGL 600
Query: 558 IGACRIHG--NTVLGEWAAGKLLEMKPDHSGYYILIA 592
+ +G ++ L + ++ E +PD + IL++
Sbjct: 601 VSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 206/439 (46%), Gaps = 39/439 (8%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLI 117
NS G +H VI G +N + L+S Y + + +A + + S W ++I
Sbjct: 37 NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMI 96
Query: 118 SMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGSM 176
S F +++ F ALS + +M+ P+EFT+ SV+++C L D + G VH I+ G
Sbjct: 97 SAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE 156
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
G S+ V ++L +Y+K G+ + A LF ++ D +SW +IS W EA + +
Sbjct: 157 GNSV-VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSE 215
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGAL 296
M + GV N + + G A +F G L
Sbjct: 216 MVKAGVPPNEFTFVKLLG----ASSFLG-------------------------------L 240
Query: 297 KLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF 356
+ GK IH + + G + ++ +L+ YS+ + A + E+ + W +++SGF
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF 300
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
R E F +M G +PN T +++L LC+ + +L GK+ H +K F++
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDS 359
Query: 417 LLLWNTLVDMYAR-SGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
+ N LVDMY + S +EA RVF ++ + V++T +I G G Q + EM
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 476 KFKIKPDHVAMVAVLTACS 494
K +++P+ V + VL ACS
Sbjct: 420 KREVEPNVVTLSGVLRACS 438
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 208/475 (43%), Gaps = 75/475 (15%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISM 119
L GK +H+ +I G N ++ LV FY++F+ +DA V SS + W ++S
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 120 FVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVGSMGW 178
FVRN EA+ + +M + P+ FTY ++L C + G ++H + I+VG
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVG-FED 358
Query: 179 SLFVHNALVSMYAKFGKLEV-ARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERM 237
S V NALV MY K EV A +F M + VSW T+I G + F L M
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Query: 238 QEEGVEMNI-----------------------------------IIWNTMAGGYLHAGNF 262
+ VE N+ ++ N++ Y +
Sbjct: 419 VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKV 478
Query: 263 KGALKLLSQMRTSIHLDHVAMVVGLN--------------------------------AC 290
A ++ M+ ++ + ++V N A
Sbjct: 479 DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWN 350
+++GAL+ GK +H ++V++GF +V N+L+ MYS+CG L A +F+ + +++WN
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWN 598
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA--RIANLQHGKEFHCYIM 408
++SG A + F +M + EP+ VT +L C+ R+ +L G E+ +
Sbjct: 599 GLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDL--GLEYFQVMK 656
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-TRRDEVTYTAMIRGYGMKG 462
K + + + LV + R+G++ EA V +++ + + + + ++R +G
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRG 711
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 199 bits (507), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 199/411 (48%), Gaps = 38/411 (9%)
Query: 248 IWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEIHGHA 306
++NT+ YL G +K +L L + M S + +++ + A ++ G +HG A
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 307 VRTGF----------------------------DVLDNVR---NALITMYSRCGDLGHAY 335
++ GF D+L+ N+L+ R G++ +A+
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 336 MLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG---AEPNYVTIASVLPLCA 392
FQRM +++W +++GF+ + +F +M+ PN T SVL CA
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 393 RI--ANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVT 450
++ GK+ H Y+M +E L L+DMY ++G + A +FD + +
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLG-TALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 451 YTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV 510
+ A+I G + AL +FE M + P+ + ++A+LTAC+ S LV G LF +
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
Query: 511 DDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLG 570
+Y IIP EHY C+ DL GRAGLL A I +P++P ++ L+GAC+IH NT LG
Sbjct: 352 SEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELG 411
Query: 571 EWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPG 621
+L+ ++P H G Y+ ++ A WSE ++R M G++K P
Sbjct: 412 NTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPA 462
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 163/338 (48%), Gaps = 12/338 (3%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAI 171
+N LI ++ + +L+ + ML V P+ T+PS++KA + GV +H +A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ G + W FV + V Y + G LE +R +FD++ V+ N+++ G AF
Sbjct: 114 KRGFL-WDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM----RTSIHLDHVAMVVGL 287
+ F+RM +++ W T+ G+ G AL + +M R I + V L
Sbjct: 173 EYFQRMPVT----DVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 288 NACSHI--GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG 345
++C++ G ++LGK+IHG+ + + + AL+ MY + GDL A +F ++ +K
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 346 LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHC 405
+ WNA++S A R + +F M PN +T+ ++L CAR + G +
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 406 YIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL 443
I + + +VD+ R+G +++A SL
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL 386
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARF-------NLFDD---ACIVTESS--- 105
S+S G LH Q + GF + + V FY +FDD C+V +S
Sbjct: 101 SVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLD 160
Query: 106 ------------------SSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQ---VIPD 144
+ + W +I+ F + L +AL + +M++ + + P+
Sbjct: 161 ACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPN 220
Query: 145 EFTYPSVLKACGELLD--CASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHL 202
E T+ SVL +C G ++H + + + + AL+ MY K G LE+A +
Sbjct: 221 EATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTI 280
Query: 203 FDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNII 247
FD + ++ +WN IIS AS G +A ++FE M+ V N I
Sbjct: 281 FDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGI 325
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 174/311 (55%), Gaps = 4/311 (1%)
Query: 319 NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLH-EGA 377
N +IT + GD A ++M + +++W ++ G+A +D+ E LF +M+ +
Sbjct: 193 NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI 252
Query: 378 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAK 437
+PN +TI ++LP + +L+ H Y+ KR + + N+L+D YA+ G + A
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF 312
Query: 438 RVFDSLT--RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSH 495
+ F + R++ V++T MI + + G G+ A+++F++M + +KP+ V M++VL ACSH
Sbjct: 313 KFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH 372
Query: 496 SGLVAQGQV-LFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMW 554
GL + + F MV++Y I P ++HY C+ D+ R G L +A++I +P + +W
Sbjct: 373 GGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVW 432
Query: 555 ATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNL 614
L+GAC ++ + L E KL+E++ H G Y+L++N++ G + + R M
Sbjct: 433 RMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVR 492
Query: 615 GVKKAPGCAWV 625
GV K PG + V
Sbjct: 493 GVAKLPGHSQV 503
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 147/310 (47%), Gaps = 24/310 (7%)
Query: 144 DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWS--LFVHNALVSMYAKFGKLEVARH 201
D FTY +LKA + + + +G+ ++V ALV MY G + A
Sbjct: 120 DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHK 179
Query: 202 LFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGN 261
+FD MPER+ V+WN +I+ + G + +A E+M V + W T+ GY
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTV----VSWTTIIDGYARVDK 235
Query: 262 FKGALKLLSQMRT--SIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLD-NVR 318
K A+ L S+M +I + + ++ L A ++G LK+ +H + + GF D V
Sbjct: 236 PKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVT 295
Query: 319 NALITMYSRCGDLGHAYMLFQRME--EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG 376
N+LI Y++CG + A+ F + K L++W M+S FA E +F+ M G
Sbjct: 296 NSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLG 355
Query: 377 AEPNYVTIASVLPLCARIANLQHGK-------EFHCYIMKREQFKEYLLLWNTLVDMYAR 429
+PN VT+ SVL C+ HG EF ++ + + + LVDM R
Sbjct: 356 LKPNRVTMISVLNACS------HGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRR 409
Query: 430 SGKVLEAKRV 439
G++ EA+++
Sbjct: 410 KGRLEEAEKI 419
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 205/431 (47%), Gaps = 36/431 (8%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVR 122
G+Q+H ++ +G N I+ LV FYA+ A + + + W +IS R
Sbjct: 203 GRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSR 261
Query: 123 NELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFV 182
++A+ + ML +P+EFT S+LKAC E G +VH + + +FV
Sbjct: 262 KGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFV 321
Query: 183 HNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
+L+ MYAK G++ R +FD M R+ V+W +II+ +A G EA LF M+
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK---- 377
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
R + +++ +V L AC +GAL LGKE+
Sbjct: 378 ------------------------------RRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 303 HGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRV 362
H ++ + + + L+ +Y +CG+ A+ + Q++ + +++W AM+SG + +
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 363 DEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNT 422
E ++M+ EG EPN T +S L CA +L G+ H I K+ + + +
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS-IAKKNHALSNVFVGSA 526
Query: 423 LVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
L+ MYA+ G V EA RVFDS+ ++ V++ AMI GY G + AL + M + D
Sbjct: 527 LIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVD 586
Query: 483 HVAMVAVLTAC 493
+L+ C
Sbjct: 587 DYIFATILSTC 597
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 190/382 (49%), Gaps = 37/382 (9%)
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
++ N L+S + G L AR +FD+MPE++ V+W +I Y G EAF LFE +
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLG 299
G+ + V LN CS +LG
Sbjct: 177 HGIRFT---------------------------------NERMFVCLLNLCSRRAEFELG 203
Query: 300 KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHM 359
+++HG+ V+ G L V ++L+ Y++CG+L A F MEEK +I+W A++S +
Sbjct: 204 RQVHGNMVKVGVGNLI-VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRK 262
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
+ +F ML+ PN T+ S+L C+ L+ G++ H ++KR K + +
Sbjct: 263 GHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKR-MIKTDVFV 321
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKI 479
+L+DMYA+ G++ + ++VFD ++ R+ VT+T++I + +G G+ A+++F M + +
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHL 381
Query: 480 KPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAK 539
+++ +V++L AC G + G+ L +++ + I + + + L+ + G A
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAF 440
Query: 540 EIITRMPYKPTPAMWATLIGAC 561
++ ++P + + W +I C
Sbjct: 441 NVLQQLPSRDVVS-WTAMISGC 461
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 221/506 (43%), Gaps = 38/506 (7%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLI 117
N + K++HA + DQ L+S R A V +S + W +I
Sbjct: 96 NGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMI 155
Query: 118 SMFVRNELFVEALSAYRKMLRKQV-IPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSM 176
+++ L EA + + ++ + +E + +L C + G +VH + +
Sbjct: 156 DGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV 215
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
G +L V ++LV YA+ G+L A FD M E+D +SW +IS + +G +A +F
Sbjct: 216 G-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFI- 273
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGAL 296
G L+ + S ++ ACS AL
Sbjct: 274 ------------------GMLNHWFLPNEFTVCSILK---------------ACSEEKAL 300
Query: 297 KLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGF 356
+ G+++H V+ V +L+ MY++CG++ +F M + +TW ++++
Sbjct: 301 RFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAH 360
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
A +E LFR M N +T+ S+L C + L GKE H I+K ++
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK-NSIEKN 419
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK 476
+ + +TLV +Y + G+ +A V L RD V++TAMI G G AL+ +EM +
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ 479
Query: 477 FKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLN 536
++P+ + L AC++S + G+ + ++ + + + + ++ + G ++
Sbjct: 480 EGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHA-LSNVFVGSALIHMYAKCGFVS 538
Query: 537 KAKEIITRMPYKPTPAMWATLIGACR 562
+A + MP K + A ++G R
Sbjct: 539 EAFRVFDSMPEKNLVSWKAMIMGYAR 564
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 105/200 (52%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C +V +L GK+LHAQ+I ++N + LV Y + DA V + S + +
Sbjct: 394 ACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS 453
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
W +IS EAL ++M+++ V P+ FTY S LKAC G +H +
Sbjct: 454 WTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAK 513
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
++FV +AL+ MYAK G + A +FD+MPE++ VSW +I YA G EA K
Sbjct: 514 KNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALK 573
Query: 233 LFERMQEEGVEMNIIIWNTM 252
L RM+ EG E++ I+ T+
Sbjct: 574 LMYRMEAEGFEVDDYIFATI 593
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 13/299 (4%)
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSG 355
++L K IH A++ D + N LI+ R GDL +A +F M EK +TW AM+ G
Sbjct: 98 MRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDG 157
Query: 356 FAHMDRVDEVSFLFRQMLHEGAE-PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
+ DE LF + G N +L LC+R A + G++ H ++K
Sbjct: 158 YLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN 217
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
L++ ++LV YA+ G++ A R FD + +D +++TA+I KG G A+ +F M
Sbjct: 218 --LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGM 275
Query: 475 CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGL 534
P+ + ++L ACS + G+ + +V I + + D++ + G
Sbjct: 276 LNHWFLPNEFTVCSILKACSEEKALRFGRQV-HSLVVKRMIKTDVFVGTSLMDMYAKCGE 334
Query: 535 LNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIAN 593
++ +++ M + T W ++I A H GE A MK H LIAN
Sbjct: 335 ISDCRKVFDGMSNRNT-VTWTSIIAA---HAREGFGEEAISLFRIMKRRH-----LIAN 384
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 225/492 (45%), Gaps = 44/492 (8%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
C+ SL GKQ+H + G + N + +LV Y DA V + S+S
Sbjct: 120 ACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYS 179
Query: 113 WNMLI--SMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
WN L+ ++ + + + LS + +M V + ++ +V K+ G++ H
Sbjct: 180 WNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHAL 239
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEA 230
+ S+F+ +LV MY K GK+ +AR +FD
Sbjct: 240 AIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFD-------------------------- 273
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM--RTSIHLDHVAMVVGLN 288
E VE +I++W M G H AL L M I+ + V + L
Sbjct: 274 ---------EIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILP 324
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDN-VRNALITMYSRCGDLGHAYMLFQRMEEKGLI 347
+ ALKLGKE+H H +++ V V + LI +Y +CGD+ +F +++ I
Sbjct: 325 VLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAI 384
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
+W A++SG+A R D+ M EG P+ VTIA+VLP+CA + ++ GKE HCY
Sbjct: 385 SWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYA 444
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMA 467
+K F + L +L+ MY++ G R+FD L +R+ +TAMI Y + +
Sbjct: 445 LK-NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAG 503
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV-DDYGIIPRIEHYACMA 526
+ +F M K +PD V M VLT CS + G+ L ++ ++ IP + A +
Sbjct: 504 IEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARII 561
Query: 527 DLFGRAGLLNKA 538
++G+ G L A
Sbjct: 562 KMYGKCGDLRSA 573
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 223/489 (45%), Gaps = 43/489 (8%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLI 117
++L G + HA I G + + LV Y + A V + + + W +I
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 118 SMFVRNELFVEALSAYRKMLRKQVI-PDEFTYPSVLKACGELLDCASGVEVHK-AIEVGS 175
+ N+ EAL +R M+ ++ I P+ ++L G++ G EVH ++ +
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
FVH+ L+ +Y K G + R +F Y S+
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVF-----------------YGSK----------- 379
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIG 294
+ N I W + GY G F AL+ + M+ D V + L C+ +
Sbjct: 380 -------QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELR 432
Query: 295 ALKLGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
A+K GKEIH +A++ F L NV +L+ MYS+CG + LF R+E++ + W AM
Sbjct: 433 AIKQGKEIHCYALKNLF--LPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAM 490
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
+ + + +FR ML P+ VT+ VL +C+ + L+ GKE H +I+K+E
Sbjct: 491 IDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKE- 549
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFE 472
F+ + ++ MY + G + A FD++ + +T+TA+I YG + A+N FE
Sbjct: 550 FESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFE 609
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
+M P+ AVL+ CS +G V + F M+ Y + P EHY+ + +L R
Sbjct: 610 QMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRC 669
Query: 533 GLLNKAKEI 541
G + +A+ +
Sbjct: 670 GRVEEAQRL 678
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 202/445 (45%), Gaps = 39/445 (8%)
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSM 176
I +F R AL+ + ++ + + T+ ++L+AC G +VH I + +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTII--SCYASRGTWGEAFKLF 234
+ F+ LV MY G ++ A+ +FD + SWN ++ + + + + + F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 235 ERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIG 294
M+E GV++N+ + + +F GA
Sbjct: 203 TEMRELGVDLNVYSLSNV------FKSFAGA----------------------------S 228
Query: 295 ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLS 354
AL+ G + H A++ G ++ +L+ MY +CG +G A +F + E+ ++ W AM++
Sbjct: 229 ALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 355 GFAHMDRVDEVSFLFRQML-HEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
G AH R E LFR M+ E PN V + ++LP+ + L+ GKE H +++K + +
Sbjct: 289 GLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNY 348
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEE 473
E + + L+D+Y + G + +RVF +R+ +++TA++ GY G AL
Sbjct: 349 VEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVW 408
Query: 474 MCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAG 533
M + +PD V + VL C+ + QG+ + + + +P + + ++ + G
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL-FLPNVSLVTSLMVMYSKCG 467
Query: 534 LLNKAKEIITRMPYKPTPAMWATLI 558
+ + R+ + A W +I
Sbjct: 468 VPEYPIRLFDRLEQRNVKA-WTAMI 491
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 179/346 (51%), Gaps = 16/346 (4%)
Query: 296 LKLGKEIHGHAVRTGFDVLDN-VRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLS 354
L++G+ +HG + GF + L+ Y++ GDL +A +F M E+ +TWNAM+
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 355 GF-AHMDR----VDEVSFLFRQM--LHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
G+ +H D+ + LFR+ G P T+ VL ++ L+ G H YI
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 408 MKREQFKEY-LLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQM 466
K E + + LVDMY++ G + A VF+ + ++ T+T+M G + G G
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
N+ M + IKP+ + ++L+A H GLV +G LF+ M +G+ P IEHY C+
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSG 586
DL G+AG + +A + I MP KP + +L AC I+G TV+GE LLE++ +
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 587 Y-------YILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWV 625
Y+ ++N+ A G W E+ ++R M+ +K PG ++V
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 209/484 (43%), Gaps = 68/484 (14%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL---- 111
N +L KQ+HAQ++ G N+ + +L+ Y + TESSS L L
Sbjct: 17 NSKTLIQAKQIHAQLVINGCHDNS-LFGKLIGHYC-------SKPSTESSSKLAHLLVFP 68
Query: 112 ---HWN-MLISMFVRNELFVEALSAYRKMLRKQVI--PDEFTYPSVLKACGELLDCAS-- 163
H + L + ++ +++ + K + +E T+ VL AC ++
Sbjct: 69 RFGHPDKFLFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALR 128
Query: 164 -GVEVHKAI-EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCY 221
G VH + ++G + S + L+ YAK G L AR +FD MPER V+WN +I Y
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 222 ASRGTWG-----EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSI 276
S G +A LF R G + +
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCG--------------------------------SGV 216
Query: 277 HLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGF--DVLDNVRNALITMYSRCGDLGHA 334
MV L+A S G L++G +HG+ + GF +V + AL+ MYS+CG L +A
Sbjct: 217 RPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
Query: 335 YMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARI 394
+ +F+ M+ K + TW +M +G A R +E L +M G +PN +T S+L I
Sbjct: 277 FSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHI 336
Query: 395 ANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-TRRDEVTYTA 453
++ G E + R + + +VD+ ++G++ EA + ++ + D + +
Sbjct: 337 GLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRS 396
Query: 454 MIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA------MVAVLTACSHSGLVAQGQVLFQ 507
+ + GE M I + + + + + + ++ VA+ +H G + + L +
Sbjct: 397 LCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRK 456
Query: 508 EMVD 511
EM +
Sbjct: 457 EMKE 460
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 152/605 (25%), Positives = 278/605 (45%), Gaps = 20/605 (3%)
Query: 59 SLSP--GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNML 116
S SP K +HAQ++ GF + T R + Y + +A + + + WN+
Sbjct: 17 SKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVC 76
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSM 176
+ +N AL + +M + V+ T S L +CG G+ V ++ +
Sbjct: 77 LKGLFKNGYLNNALDLFDEMPERDVVSWN-TMISGLVSCGFH---EYGIRVFFDMQRWEI 132
Query: 177 GWSLFVHNALVSMYA--KFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLF 234
+ F + L S+ + G+ + + + V WN+++ Y G + A +F
Sbjct: 133 RPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVF 192
Query: 235 ERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNACSHI 293
M++ +++ WN + +GN + AL MR I D + + ++ CS +
Sbjct: 193 LTMEDR----DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDL 248
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAML 353
L GK+ ++ GF V A I M+S+C L + LF+ +E+ + N+M+
Sbjct: 249 RELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMI 308
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQF 413
++ ++ LF + + P+ T +SVL + L HG + H ++K F
Sbjct: 309 GSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKL-GF 366
Query: 414 KEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEE 473
+ +L++MY ++G V A VF +D + + +I G +L IF +
Sbjct: 367 DLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQ 426
Query: 474 MCKFK-IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
+ + +KPD V ++ +L AC ++G V +G +F M +G+ P EHYAC+ +L R
Sbjct: 427 LLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRV 486
Query: 533 GLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIA 592
G++N+AK+I ++P++P+ +W ++ A G+T L E A +LE +P S Y+++
Sbjct: 487 GMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLI 546
Query: 593 NMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPF-FVGDTSNPHAG-EIYPL 650
+Y W ++R M +K A G + + + E S F F D H G + L
Sbjct: 547 KIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISI--ESSVFSFEADQLQIHGGHDTCAL 604
Query: 651 MDGLN 655
+D L+
Sbjct: 605 LDLLS 609
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C ++ LS GKQ A I +GF N+I+L + +++ N DD+ + + +
Sbjct: 245 CSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC 304
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N +I + + +AL + + + V PD+FT+ SVL + ++ G +VH +
Sbjct: 305 NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIK 363
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKL 233
V +L+ MY K G +++A +F +D + WNT+I A E+ +
Sbjct: 364 LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAI 423
Query: 234 FERM 237
F ++
Sbjct: 424 FNQL 427
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/527 (24%), Positives = 238/527 (45%), Gaps = 77/527 (14%)
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVS----WNTIISCYASRGTWGEAFKLF 234
S VH L+ + +G + + R L + + VS N+++ Y + + +A K+F
Sbjct: 56 SPLVH--LLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVF 113
Query: 235 ERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHI 293
+ M + ++I WN++ GY+ +G F+ + L ++ R+ + + + L AC+ +
Sbjct: 114 DEMPDP----DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARL 169
Query: 294 GALKLGKEIHGHAVRTGFDVLDNV-RNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM 352
LG IH V+ G + + V N LI MY +CG + A ++FQ MEEK ++WNA+
Sbjct: 170 HLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAI 229
Query: 353 LSG-------------FAHMDRVDEVSF--LFRQMLHEGAEPNYVTIASVLP-------- 389
++ F M D V++ L + G N + S +P
Sbjct: 230 VASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWN 289
Query: 390 -LCARIANLQHGKEFHCYIMKRE----QFKEY---------------------------- 416
+ N + E + K +F EY
Sbjct: 290 TILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKL 349
Query: 417 -----LLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIF 471
+++ + L+DMY++ G + A+ +F ++ R++ + + MI GY G+ A+ +F
Sbjct: 350 GLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLF 409
Query: 472 EEMCKFK-IKPDHVAMVAVLTACSHSGLVAQGQV-LFQEMVDDYGIIPRIEHYACMADLF 529
++ + + +KPD + +L CSH + + + F+ M+++Y I P +EH +
Sbjct: 410 NQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAM 469
Query: 530 GRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEM-KPDHSGY- 587
G+ G + +AK++I + W L+GAC + + A K++E+ D Y
Sbjct: 470 GQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYL 529
Query: 588 YILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPF 634
YI+++N+YA W E+ ++R MR GV K G +W+D + S +
Sbjct: 530 YIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 229/506 (45%), Gaps = 65/506 (12%)
Query: 56 NVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNM 115
N +S +QLH V GF NT + L+ FY + +DA V + + + WN
Sbjct: 67 NYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNS 126
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH-KAIEVG 174
L+S +V++ F E + + ++ R V P+EF++ + L AC L G +H K +++G
Sbjct: 127 LVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLG 186
Query: 175 SMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLF 234
++ V N L+ MY K G ++ A +F +M E+D VSWN I++ + G F
Sbjct: 187 LEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFF 246
Query: 235 ERM-QEEGVEMNIII--------------------------WNTMAGGYLHAGNFKGALK 267
+M + V N +I WNT+ GY+++ A +
Sbjct: 247 HQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATE 306
Query: 268 LLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYS 326
++M +S + D ++ + L A + + + G IH A + G D V +ALI MYS
Sbjct: 307 FFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYS 366
Query: 327 RCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIA 385
+CG L HA ++F M K LI WN M+SG+A E LF Q+ E +P+ T
Sbjct: 367 KCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFL 426
Query: 386 SVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTR 445
++L +C+ HC + + L + +++ Y R+ S+
Sbjct: 427 NLLAVCS-----------HCEV----PMEVMLGYFEMMINEY----------RIKPSVEH 461
Query: 446 RDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVL 505
++IR G +GE A + +E F D VA A+L ACS + + +
Sbjct: 462 -----CCSLIRAMGQRGEVWQAKQVIQE---FGFGYDGVAWRALLGACSARKDLKAAKTV 513
Query: 506 FQEMVDDYGIIPRIEH-YACMADLFG 530
+M+ + G + E+ Y M++L+
Sbjct: 514 AAKMI-ELGDADKDEYLYIVMSNLYA 538
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 41/280 (14%)
Query: 279 DHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLF 338
D +V L + G + L +++HG+ + GF + N+L+ Y L A+ +F
Sbjct: 54 DASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVF 113
Query: 339 QRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQ 398
M + +I+WN+++SG+ R E LF ++ PN + + L CAR+
Sbjct: 114 DEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSP 173
Query: 399 HGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGY 458
G H ++K K +++ N L+DMY + G + +A VF + +D V++ A++
Sbjct: 174 LGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV--- 230
Query: 459 GMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPR 518
+CS +G + G F +M + P
Sbjct: 231 --------------------------------ASCSRNGKLELGLWFFHQMPN-----PD 253
Query: 519 IEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATLI 558
Y + D F ++G N A ++++ MP P + W T++
Sbjct: 254 TVTYNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTIL 292
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 201/452 (44%), Gaps = 49/452 (10%)
Query: 6 IASLKNFVYHGHLSNAFKSFLHIQHHAA-ASSPGFSHXXXXXXXXXXXGCINVNSLSPGK 64
++ Y L A K+ +Q H A S +S CI+ ++ G
Sbjct: 30 LSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKC--------CISNRAVHEGN 81
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNE 124
+ + G ++ L++ Y +FNL +DA + + + W +IS + + +
Sbjct: 82 LICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK 141
Query: 125 LFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHN 184
+ +AL MLR V P+ +TY SVL++C + D +H I + +FV +
Sbjct: 142 IHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRS 198
Query: 185 ALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM 244
AL+ ++AK G+ E A +FD M D + WN+II +A A +LF+RM+ G
Sbjct: 199 ALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG--- 255
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHG 304
+ + L AC+ + L+LG + H
Sbjct: 256 -------------------------------FIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 305 HAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDE 364
H V+ D++ N NAL+ MY +CG L A +F +M+E+ +ITW+ M+SG A E
Sbjct: 285 HIVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 365 VSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLV 424
LF +M G +PNY+TI VL C+ L+ G + + K + ++
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMI 402
Query: 425 DMYARSGKVLEAKRVFDSL-TRRDEVTYTAMI 455
D+ ++GK+ +A ++ + + D VT+ ++
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 170/361 (47%), Gaps = 14/361 (3%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHW 113
C N + L KQ+H ++I + +++ +L+S + F A +V S W
Sbjct: 30 CSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTW 86
Query: 114 NMLISMFVRNELFVEALSAY-RKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK-AI 171
N++I N EAL + M+ Q D+FT+P V+KAC G +VH AI
Sbjct: 87 NLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAI 146
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAF 231
+ G +F N L+ +Y K GK + R +FD MP R VSW T++ S A
Sbjct: 147 KAGFFN-DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNAC 290
+F +M N++ W M Y+ A +L +M+ + + +V L A
Sbjct: 206 IVFNQMPMR----NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDN-VRNALITMYSRCGDLGHAYMLFQRMEEKGLITW 349
+ +G+L +G+ +H +A + GF VLD + ALI MYS+CG L A +F M+ K L TW
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGF-VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 350 NAMLSGF-AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
N+M++ H + +S EP+ +T VL CA N++ G + ++
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Query: 409 K 409
+
Sbjct: 381 Q 381
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 184/418 (44%), Gaps = 70/418 (16%)
Query: 166 EVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRG 225
++H I ++ + L+S+ + FG+ + A +F+ + +WN +I +
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 226 TWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVV 285
EA LF +L + D
Sbjct: 98 KPREALLLF---------------------------------ILMMISHQSQFDKFTFPF 124
Query: 286 GLNACSHIGALKLGKEIHGHAVRTGF--DVLDNVRNALITMYSRCG-------------- 329
+ AC +++LG ++HG A++ GF DV +N L+ +Y +CG
Sbjct: 125 VIKACLASSSIRLGTQVHGLAIKAGFFNDVF--FQNTLMDLYFKCGKPDSGRKVFDKMPG 182
Query: 330 -----------------DLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQM 372
L A ++F +M + +++W AM++ + R DE LFR+M
Sbjct: 183 RSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRM 242
Query: 373 LHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGK 432
+ +PN TI ++L ++ +L G+ H Y K F L L+DMY++ G
Sbjct: 243 QVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHK-NGFVLDCFLGTALIDMYSKCGS 301
Query: 433 VLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKF-KIKPDHVAMVAVLT 491
+ +A++VFD + + T+ +MI G+ G G+ AL++FEEM + ++PD + V VL+
Sbjct: 302 LQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLS 361
Query: 492 ACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKP 549
AC+++G V G F M+ YGI P EH ACM L +A + KA ++ M P
Sbjct: 362 ACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 119/270 (44%), Gaps = 35/270 (12%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFD-----QNTIM------------------LP--RLVS 87
C+ +S+ G Q+H I GF QNT+M +P +VS
Sbjct: 128 ACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVS 187
Query: 88 FYARF------NLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQV 141
+ + D A IV + W +I+ +V+N EA +R+M V
Sbjct: 188 WTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDV 247
Query: 142 IPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARH 201
P+EFT ++L+A +L + G VH F+ AL+ MY+K G L+ AR
Sbjct: 248 KPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARK 307
Query: 202 LFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEG-VEMNIIIWNTMAGGYLHAG 260
+FD M + +WN++I+ G EA LFE M+EE VE + I + + + G
Sbjct: 308 VFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTG 367
Query: 261 NFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
N K L+ ++M I + ++ + NAC
Sbjct: 368 NVKDGLRYFTRM---IQVYGISPIREHNAC 394
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 136/618 (22%), Positives = 247/618 (39%), Gaps = 148/618 (23%)
Query: 104 SSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCAS 163
SS SL +L+ V+ + F ++ + +L P +F Y ++A +L D
Sbjct: 143 SSDSL-----TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 197
Query: 164 GVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIIS 219
G+E+ ++ + S+F++N L+ K ++ A LFD M R +++NT+I
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 220 CYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR------ 273
Y G ++FK+ ERM+ + +E ++I +NT+ G AG + A +L +M+
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 274 ------------------------------TSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
+ + ++ + LNA G ++ +EI
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI---------------- 347
G + G + + N +I Y R GDL A M + ME++G+
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 348 -----------------------TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTI 384
T+N ++ G+ D+ + ++M G PN V+
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 385 ASVLP-LC-----------------------ARIANL------QHGKEFHCYIMKREQFK 414
+++ LC RI N+ GK + +E K
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 415 E----YLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQM 466
+ L+ +NTL+D + +GK+ EA+ + ++R+ D TY ++I GYG G Q
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
+ ++EEM + IKP +++ C+ G + + LF EM + P + Y +
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM----SLKPDLLVYNGVL 672
Query: 527 DLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNT-VLGEWAAGKLL------- 578
+ G + KA + +M K IG + N+ +LG+ GKL
Sbjct: 673 HCYAVHGDMEKAFNLQKQMIEKS--------IGLDKTTYNSLILGQLKVGKLCEVRSLID 724
Query: 579 -----EMKPDHSGYYILI 591
EM+P+ Y I++
Sbjct: 725 EMNAREMEPEADTYNIIV 742
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 203/435 (46%), Gaps = 23/435 (5%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL----EPLHW 113
+ LS + A+++ LG++ + + L L++ Y DA + + + + +
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 114 NMLI-SMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
LI +F+ N+ EA++ +M+++ PD TY +V+ + D + + +E
Sbjct: 192 TTLIHGLFLHNKA-SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWG 228
+ ++ + N ++ K+ +EVA LF M + + V++N++I+C + G W
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGL 287
+A +L M E+ + N++ +N + + G A KL +M + SI D + + +
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 288 NA-CSHIGALKLGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLFQRMEEK 344
N C H L K++ V D L N++ N LI + +C + LF+ M ++
Sbjct: 371 NGFCMH-NRLDEAKQMFKFMVSK--DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 345 GL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHG 400
GL +T+ ++ GF D +F+QM+ + +T + +L L
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 401 KEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT-RRDEVTYTAMIRGYG 459
Y+ K E + + ++NT+++ ++GKV EA +F SL+ + D VTY MI G
Sbjct: 488 LVIFKYLQKSE-MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC 546
Query: 460 MKGEGQMALNIFEEM 474
K Q A ++F +M
Sbjct: 547 SKRLLQEADDLFRKM 561
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 129/575 (22%), Positives = 237/575 (41%), Gaps = 105/575 (18%)
Query: 84 RLVSFYARFNLFDDACIVTESSSSLEPLH----WNMLISMFVRNELFVEALSAYRKMLRK 139
+L+S A+ N F+ + E +L H +++ I+ F R AL+ KM++
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 140 QVIPDEFTYPSVLKA-CGELLDCASGVEVHKAIEVG---------SMGWSLFVHNALVSM 189
PD T S+L C + V + +E+G ++ LF+HN
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN----- 202
Query: 190 YAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
K A L D M +R D V++ T+++ RG A L +M+ ++ N
Sbjct: 203 -----KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC----------SHIGA 295
++I+NT+ + + A+ L ++M T +V L C S + +
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNA 351
L K+I+ + V NALI + + G L A L + M ++ + IT+N
Sbjct: 318 NMLEKKINPNVV---------TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
+++GF +R+DE +F+ M+ + PN T
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT---------------------------- 400
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMA 467
+NTL++ + + +V + +F +++R + VTYT +I+G+ G+ A
Sbjct: 401 --------YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMAD 527
+F++M ++ D + +L G + V+F+ + + I Y M +
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL-QKSEMELNIFIYNTMIE 511
Query: 528 LFGRAGLLNKAKEIITRMPYKPTPAMWATLI-GACRIHGNTVLGEWAAGKLLEMKPD--- 583
+AG + +A ++ + KP + T+I G C + L + A +MK D
Sbjct: 512 GMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC----SKRLLQEADDLFRKMKEDGTL 567
Query: 584 -HSGYY--ILIANMYAAAGCWSELAEVRTYMRNLG 615
+SG Y ++ AN+ S AE+ MR+ G
Sbjct: 568 PNSGTYNTLIRANLRDCDRAAS--AELIKEMRSSG 600
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 115/256 (44%), Gaps = 40/256 (15%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPL----HWNM 115
L ++LH ++I D +TI L++ + N D+A + + S + L +N
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASG----------- 164
LI+ F + + + + +R+M ++ ++ + TY ++++ + DC S
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 165 ------------------------VEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVAR 200
+ + K ++ M ++F++N ++ K GK+ A
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 201 HLFDNMPERDDV-SWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHA 259
LF ++ + DV ++NT+IS S+ EA LF +M+E+G N +NT+ L
Sbjct: 524 DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
Query: 260 GNFKGALKLLSQMRTS 275
+ + +L+ +MR+S
Sbjct: 584 CDRAASAELIKEMRSS 599
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 145/353 (41%), Gaps = 27/353 (7%)
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGL 287
+A LF M + +I+ +N + F+ + L QM+T I D + +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG-- 345
N L L + ++ G++ ++L+ Y + A L +M E G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 346 --LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP-LCAR-----IANL 397
T+ ++ G ++ E L QM+ G +P+ VT +V+ LC R NL
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 398 QHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL----TRRDEVTYTA 453
+ M+ + K ++++NT++D + V A +F + R + VTY +
Sbjct: 246 LNK-------MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 454 MIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDY 513
+I G A + M + KI P+ V A++ A G + + + L +EM+
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI-QR 357
Query: 514 GIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYK---PTPAMWATLI-GACR 562
I P Y + + F L++AK++ M K P + TLI G C+
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 225/520 (43%), Gaps = 50/520 (9%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVE-VHKAI 171
+++++ + R L +ALS +P +Y +VL A S E V K +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTW 227
+ ++F +N L+ + G ++VA LFD M + + V++NT+I Y
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVG 286
+ FKL M +G+E N+I +N + G G K +L++M R LD V
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
+ G +H +R G +LI + G++ A +M +GL
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 347 I----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVL-------PLCARIA 395
T+ ++ GF+ ++E + R+M G P+ VT +++ + IA
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 396 NLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTY 451
L+ MK + ++ ++T++ + RS V EA RV + + D +TY
Sbjct: 437 VLED--------MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 452 TAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVD 511
+++I+G+ + + A +++EEM + + PD A++ A G + + L EMV+
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 512 DYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYK---PTPAMWATLIGAC-RIHGNT 567
G++P + Y+ + + + +AK ++ ++ Y+ P+ + TLI C I +
Sbjct: 549 K-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 568 VL----GEWAAGKLLEM------------KPDHSGYYILI 591
V+ G G + E KPD + Y I+I
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/519 (21%), Positives = 222/519 (42%), Gaps = 80/519 (15%)
Query: 79 TIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLR 138
TI R +SF N+F + + ES S +N+LI F AL+ + KM
Sbjct: 179 TIRSKRNISFAE--NVFKE---MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 139 KQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEV 198
K +P+ TY +++ +L G ++ +++ + + +L +N +++ + G+++
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 199 ARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAG 254
+ M R D+V++NT+I Y G + +A + M G+ ++I + ++
Sbjct: 294 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 353
Query: 255 GYLHAGNFKGALKLLSQMRT----SIHLDHVAMVVGLNACSHIG-ALKLGKEIHGHAVRT 309
AGN A++ L QMR + +V G + ++ A ++ +E++ +
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN---- 409
Query: 310 GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHMDRVDEV 365
GF NALI + G + A + + M+EKGL ++++ +LSGF VDE
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 366 SFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVD 425
+ R+M+ +G +P+ +T +++L+
Sbjct: 470 LRVKREMVEKGIKPDTIT------------------------------------YSSLIQ 493
Query: 426 MYARSGKVLEAKRVFDSLTR----RDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
+ + EA +++ + R DE TYTA+I Y M+G+ + AL + EM + + P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL------------- 528
D V ++ + + + L ++ + + + ++ + +
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 529 -FGRAGLLNKAKEIITRM---PYKPTPAMWATLI-GACR 562
F G++ +A ++ M +KP + +I G CR
Sbjct: 614 GFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 27/244 (11%)
Query: 74 GFDQNTIMLPRLVSFYARFNLFDDACIV----TESSSSLEPLHWNMLISMFVRNELFVEA 129
G + + ++S + R D+A V E + + ++ LI F EA
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 130 LSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSM 189
Y +MLR + PDEFTY +++ A D +++H + + + ++ L++
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 190 YAKFGKLEVARHLF------DNMPERDDVSWNTII-SC--------------YASRGTWG 228
K + A+ L +++P DV+++T+I +C + +G
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPS--DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN 288
EA ++FE M + + + +N M G+ AG+ + A L +M S L H V+ L
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 289 ACSH 292
H
Sbjct: 683 KALH 686
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 209/472 (44%), Gaps = 24/472 (5%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVT----ESSSSLEPLHW 113
+ LS + A+++ LG++ + + L L++ + N DA + E + +
Sbjct: 130 SQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N LI R+ EA++ +M+ K PD TY V+ + D + + K +E
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGE 229
G + + ++N ++ + + A +LF M + + V++N++I C + G W +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLN 288
A +L M E + N++ ++ + ++ G A KL +M + SI D +N
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 289 A-CSHIGALKLGKEIHGHAVRTGFDVLDNV--RNALITMYSRCGDLGHAYMLFQRMEEKG 345
C H +L + H + D NV N LI + + + LF+ M ++G
Sbjct: 370 GFCMHD---RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 346 L----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGK 401
L +T+ ++ GF D +F+QM+ +G P+ +T + +L ++
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 402 EFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDEVTYTAMIRG 457
Y ++R + + + +N +++ ++GKV + +F SL+ + + VTYT M+ G
Sbjct: 487 VVFEY-LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 458 YGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
+ KG + A +F EM + PD ++ A G A L +EM
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 162/385 (42%), Gaps = 54/385 (14%)
Query: 195 KLEVARHLFDNM----PERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWN 250
KL+ A +LF +M P V ++ ++S A + L E+MQ G+ N+ ++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 251 TMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTG 310
+ + AL +L++M +KLG E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKM-----------------------MKLGYEP-------- 149
Query: 311 FDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHMDRVDEVS 366
D++ N+L+ + + A L +M E G T+N ++ G +R E
Sbjct: 150 -DIV--TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 367 FLFRQMLHEGAEPNYVTIASVLP-LCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVD 425
L +M+ +G +P+ VT V+ LC R ++ M++ + + ++++NT++D
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKR-GDIDLALSL-LKKMEQGKIEPGVVIYNTIID 264
Query: 426 MYARSGKVLEAKRVFDSLT----RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
V +A +F + R + VTY ++IR G A + +M + KI P
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
+ V A++ A G + + + L+ EM+ I P I Y+ + + F L++AK +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 542 ITRMPYK---PTPAMWATLI-GACR 562
M K P + TLI G C+
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCK 408
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+ LI F + A +++M+ V+PD TY +L + + V + ++
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWG 228
M ++ +N ++ K GK+E LF ++ + + V++ T++S + +G
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT 274
EA LF M+EEG + +NT+ +L G+ + +L+ +MR+
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 212/495 (42%), Gaps = 58/495 (11%)
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALV 187
+A++ +++M+R + +P + A ++ K +E+ + +++ N ++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 188 SMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
+ + + K A + + E D ++NT+I G EA L +RM E G +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
+++ +N++ G +G+ AL LL +M +E +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKM---------------------------EERN 223
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHM 359
A DV + +I R G + A LF+ ME KG+ +T+N+++ G
Sbjct: 224 VKA-----DVF--TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
+ ++ + L + M+ PN +T +L + + LQ E + ++ R ++
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIIT 335
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
+NTL+D Y ++ EA + D + R D VT+T++I+GY M + +F +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 476 KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLL 535
K + + V ++ SG + + LFQEMV +G++P + Y + D G L
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV-SHGVLPDVMTYGILLDGLCDNGKL 454
Query: 536 NKAKEIITRMPYKPTP---AMWATLI-GACRIHGNTVLGEWAAGKLLE---MKPDHSGYY 588
KA EI + M+ T+I G C+ G V W L +KP+ Y
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCK--GGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 589 ILIANMYAAAGCWSE 603
++I+ + G SE
Sbjct: 513 VMISGL-CKKGSLSE 526
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 212/490 (43%), Gaps = 31/490 (6%)
Query: 82 LPRLVSF---------YARFNLFDDACIVTESSSSLEPLH-WNMLISMFVRNELFVEALS 131
LP LV F +FNL D C E + ++ N++I+ F R A S
Sbjct: 85 LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144
Query: 132 AYRKMLRKQVIPDEFTYPSVLKACGELLD---CASGVEVHKAIEVGSMGWSLFVHNALVS 188
K+++ PD T+ +++K G L+ + V V + +E G + +N++V+
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIK--GLFLEGKVSEAVVLVDRMVENGCQP-DVVTYNSIVN 201
Query: 189 MYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM 244
+ G +A L M ER D +++TII G A LF+ M+ +G++
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 245 NIIIWNTMAGGYLHAGNFK-GALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
+++ +N++ G AG + GAL L + I + + V L+ G L+ E++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK----GLITWNAMLSGFAHM 359
+ G N L+ Y L A + M ++T+ +++ G+ +
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
RVD+ +FR + G N VT + ++ + ++ +E ++ + ++
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD-VMT 440
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRRDE----VTYTAMIRGYGMKGEGQMALNIFEEMC 475
+ L+D +GK+ +A +F+ L + V YT +I G G+ + A N+F +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 476 KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLL 535
+KP+ + +++ G +++ +L ++M +D G P Y + R G L
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAPNDCTYNTLIRAHLRDGDL 559
Query: 536 NKAKEIITRM 545
+ ++I M
Sbjct: 560 TASAKLIEEM 569
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 107/241 (44%), Gaps = 11/241 (4%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSS----LEPLHW 113
N LS + ++ + + L+ Y DD V + S + +
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
++L+ F ++ A +++M+ V+PD TY +L + +E+ + ++
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGE 229
M + ++ ++ K GK+E A +LF ++P + + +++ +IS +G+ E
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT---SIHLDHVAMVVG 286
A L +M+E+G N +NT+ +L G+ + KL+ +M++ S + MV+
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Query: 287 L 287
+
Sbjct: 587 M 587
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 102/240 (42%), Gaps = 5/240 (2%)
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
+ +N L+ + EA + M+R + PD T+ S++K + G++V +
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGT 226
I + + ++ LV + + GK+++A LF M D +++ ++ G
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 227 WGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVV 285
+A ++FE +Q+ +++ I+++ T+ G G + A L + + + + V
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 286 GLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG 345
++ G+L + G D N LI + R GDL + L + M+ G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 115/212 (54%), Gaps = 1/212 (0%)
Query: 371 QMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARS 430
++L +GA P+ + CA + +L+H K+ H + ++ +F+ L N ++ M+
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQ-SKFRGDPKLNNMVISMFGEC 284
Query: 431 GKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVL 490
+ +AKRVFD + +D ++ M+ Y G G AL++FEEM K +KP+ + V
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 491 TACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPT 550
AC+ G + + + F M +++GI P+ EHY + + G+ G L +A++ I +P++PT
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 551 PAMWATLIGACRIHGNTVLGEWAAGKLLEMKP 582
W + R+HG+ L ++ ++++ P
Sbjct: 405 ADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 14/240 (5%)
Query: 262 FKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNAL 321
+K A++LL + D V+ +C+++ +L+ K++H H +++ F + N +
Sbjct: 221 YKDAIELLDK---GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMV 277
Query: 322 ITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNY 381
I+M+ C + A +F M +K + +W+ M+ ++ D+ LF +M G +PN
Sbjct: 278 ISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 382 VTIASVLPLCARIANLQHGKEFHCYIMKRE-----QFKEYLLLWNTLVDMYARSGKVLEA 436
T +V CA + ++ H MK E + + YL + L + G ++EA
Sbjct: 338 ETFLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVL----GKCGHLVEA 392
Query: 437 KRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHS 496
++ L + +R Y + G + L + E + P + + T S
Sbjct: 393 EQYIRDLPFEPTADFWEAMRNYA-RLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKS 451
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 5/164 (3%)
Query: 135 KMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFG 194
++L K +PD + + ++C L +VH ++N ++SM+ +
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 195 KLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAG 254
+ A+ +FD+M ++D SW+ ++ Y+ G +A LFE M + G++ N + T+
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 255 GYLHAGNFKGALKLLSQMRT----SIHLDHVAMVVG-LNACSHI 293
G + A M+ S +H V+G L C H+
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHL 389
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 171/379 (45%), Gaps = 32/379 (8%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPE----RDDVSWNTIISCYASRGTWGEAFKLFERMQE 239
+A++S ++GK+ +A+ +F+ +++ +IS Y G EA +F M+E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 240 EGVEMNIIIWNTMAGGYLHAG-NFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALK 297
G+ N++ +N + G FK K +M R + D + L CS G +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 298 LGKEIHGHAVRTGFDVLDNVR--------NALITMYSRCGDLGHAYMLFQRMEEK----G 345
A R FD + N R N L+ + G + A+ + +M K
Sbjct: 357 --------AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPN 408
Query: 346 LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHC 405
+++++ ++ GFA R DE LF +M + G + V+ ++L + ++ + +
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI-L 467
Query: 406 YIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMK 461
M K+ ++ +N L+ Y + GK E K+VF + R + +TY+ +I GY
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 462 GEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEH 521
G + A+ IF E ++ D V A++ A +GLV L EM + GI P +
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVT 586
Query: 522 YACMADLFGRAGLLNKAKE 540
Y + D FGR+ ++++ +
Sbjct: 587 YNSIIDAFGRSATMDRSAD 605
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 202/448 (45%), Gaps = 50/448 (11%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGEL-LDCASGVEVHKAI 171
++ LIS + R+ L EA+S + M + P+ TY +V+ ACG+ ++ + +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 172 EVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTW 227
+ + N+L+++ ++ G E AR+LFD M E+D S+NT++ G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVG 286
AF++ +M + + N++ ++T+ G+ AG F AL L +MR I LD V+
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 287 LNACSHIG----ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME 342
L+ + +G AL + +E+ ++ DV+ NAL+ Y + G +F M+
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKK--DVV--TYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 343 EK----GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVL-PLCARIANL 397
+ L+T++ ++ G++ E +FR+ G + V ++++ LC L
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN--GL 564
Query: 398 QHGKEFHCYIMKREQFKEYLLLWNTLVDMYARS------------GKVLEAKRVFDSLTR 445
M +E ++ +N+++D + RS G + + +LT
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTE 624
Query: 446 RD---------EVTYTAMIRGYGMKGEGQMALN----IFEEMCKFKIKPDHVAMVAVLTA 492
+ ++T + R EG L+ +F +M + +IKP+ V A+L A
Sbjct: 625 TEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684
Query: 493 CSHSGLVAQGQVLFQE--MVDD--YGII 516
CS +L +E + D+ YG++
Sbjct: 685 CSRCNSFEDASMLLEELRLFDNKVYGVV 712
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 48/285 (16%)
Query: 93 NLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVL 152
NLFD+ +T + +N L+ + A +M K+++P+ +Y +V+
Sbjct: 360 NLFDE---MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 153 KACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----E 208
+ + + + + +N L+S+Y K G+ E A + M +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 209 RDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKL 268
+D V++N ++ Y +G + E K+F M+ E V N++ ++T+ GY G +K A+++
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 269 LSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRC 328
+ +++ GL A DV+ + +ALI +
Sbjct: 537 FREFKSA----------GLRA----------------------DVV--LYSALIDALCKN 562
Query: 329 GDLGHAYMLFQRMEEKGL----ITWNAMLSGF---AHMDRVDEVS 366
G +G A L M ++G+ +T+N+++ F A MDR + S
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYS 607
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 46/261 (17%)
Query: 403 FHCYIMKREQFK-EYLLLWNTLVDMYARSGKVLEAKRVFDSLTR----RDEVTYTAMIRG 457
F+ + +KRE+ K E L + ++ R GKV AKR+F++ ++A+I
Sbjct: 218 FYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISA 277
Query: 458 YGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
YG G + A+++F M ++ ++P+ V AV+ AC G+ + F + + G+ P
Sbjct: 278 YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQP 337
Query: 518 -------------------------------RIEH----YACMADLFGRAGLLNKAKEII 542
RIE Y + D + G ++ A EI+
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 543 TRMPYK---PTPAMWATLIGACRIHG--NTVLGEWAAGKLLEMKPDHSGYYILIANMYAA 597
+MP K P ++T+I G + L + + L + D Y L++ +Y
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS-IYTK 456
Query: 598 AGCWSELAEVRTYMRNLGVKK 618
G E ++ M ++G+KK
Sbjct: 457 VGRSEEALDILREMASVGIKK 477
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 127/552 (23%), Positives = 225/552 (40%), Gaps = 69/552 (12%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVL---------KACGELLDCAS 163
+N+LI++ F ++ +KM + P TY +VL KA ELLD
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295
Query: 164 GVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYAS 223
K ++ +++ +H+ S G L + R + M ++V++NT+I+ +++
Sbjct: 296 S----KGVDADVCTYNMLIHDLCRSNRIAKGYL-LLRDMRKRMIHPNEVTYNTLINGFSN 350
Query: 224 RGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVA 282
G A +L M G+ N + +N + G++ GNFK ALK+ M + V+
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 283 MVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME 342
V L+ L + + R G V +I + G L A +L M
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 343 EKG----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQ 398
+ G ++T++A+++GF + R + ++ G PN + ++++ C R+ L+
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530
Query: 399 HGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAM 454
+ ++ +++ +N LV ++GKV EA+ +T + V++ +
Sbjct: 531 EAIRIYEAMILEGHTRDH-FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589
Query: 455 IRGYGMKGEGQMALNIFEEMCKFKIKP--------------------------------- 481
I GYG GEG A ++F+EM K P
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 649
Query: 482 --DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAK 539
D V +LTA SG +A+ LF EMV I+P Y + +GL K K
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR-SILPDSYTYTSLI-----SGLCRKGK 703
Query: 540 EIITRMPYKPTPAMWATL----IGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMY 595
+I + K A L + C + G G+W AG + D+ G+ I
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763
Query: 596 AAAGCWSELAEV 607
A +S + ++
Sbjct: 764 AMIDGYSRMGKI 775
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 186/465 (40%), Gaps = 92/465 (19%)
Query: 165 VEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISC 220
+E+ + + + S++ NA++ K G+ M +R D ++N +I+
Sbjct: 183 LEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINV 242
Query: 221 YASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDH 280
+ G++ ++ L ++M++ G I+ +NT+ Y G FK A++LL M++
Sbjct: 243 LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK----- 297
Query: 281 VAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQR 340
V + C++ N LI R + Y+L +
Sbjct: 298 ---GVDADVCTY--------------------------NMLIHDLCRSNRIAKGYLLLRD 328
Query: 341 MEEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIAN 396
M ++ + +T+N +++GF++ +V S L +ML G PN+VT
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT------------- 375
Query: 397 LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYT 452
+N L+D + G EA ++F + + EV+Y
Sbjct: 376 -----------------------FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 412
Query: 453 AMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDD 512
++ G E +A + M + + + ++ +G + + VL EM D
Sbjct: 413 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 472
Query: 513 YGIIPRIEHYACMADLFGRAGLLNKAKEIITRM---PYKPTPAMWATLIGACRIHG--NT 567
GI P I Y+ + + F + G AKEI+ R+ P +++TLI C G
Sbjct: 473 -GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 568 VLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMR 612
+ + A L DH + +L+ ++ A ++AE +MR
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAG----KVAEAEEFMR 572
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 110/548 (20%), Positives = 211/548 (38%), Gaps = 45/548 (8%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTES----SSSL 108
G V K++ ++ +G N I+ L+ R +A + E+ +
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 109 EPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH 168
+ +N+L++ + EA R M ++P+ ++ ++ G + V
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNM----PERDDVSWNTIISCYASR 224
+ + F + +L+ K G L A ++ D V +NT+++
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 225 GTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLL----SQMRTSIHLDH 280
G +A LF M + + + + ++ G G K + +L ++ R ++ +
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTVIAILFAKEAEARGNVLPNK 724
Query: 281 VAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNV-----RNALITMYSRCGDLGHAY 335
V + C G K G+ G R D L + NA+I YSR G +
Sbjct: 725 V-----MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 336 MLFQRMEEKG----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIAS-VLPL 390
L M + L T+N +L G++ V L+R ++ G P+ +T S VL +
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Query: 391 CARI---ANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKV---LEAKRVFDSL- 443
C L+ K F C ++ +++ +N L+ +G++ + +V SL
Sbjct: 840 CESNMLEIGLKILKAFICRGVEVDRYT-----FNMLISKCCANGEINWAFDLVKVMTSLG 894
Query: 444 TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQ 503
D+ T AM+ Q + + EM K I P+ + ++ G +
Sbjct: 895 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 504 VLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAK---EIITRMPYKPTPAMWATLIGA 560
V+ +EM+ P + A M + G ++A + +M PT A + TL+
Sbjct: 955 VVKEEMIAHKICPPNVAESA-MVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 1013
Query: 561 CRIHGNTV 568
C +GN +
Sbjct: 1014 CCKNGNVI 1021
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/423 (17%), Positives = 178/423 (42%), Gaps = 60/423 (14%)
Query: 106 SSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVL------------- 152
++++ + +N L++ ++ +A+S + +M+++ ++PD +TY S++
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 153 ------KACGELL------DC-----------ASGVEVHKAIEVGSMGWSLFVHNALVSM 189
+A G +L C +G+ + ++ + NA++
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768
Query: 190 YAKFGKLEVARHLFDNMPERDD----VSWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
Y++ GK+E L M ++ ++N ++ Y+ R +F L+ + G+ +
Sbjct: 769 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQ-MRTSIHLDHVAMVVGLNACSHIGALKLGKEIHG 304
+ +++ G + + LK+L + + +D + ++ C G + ++
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888
Query: 305 HAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI----TWNAMLSGFAHMD 360
G + + +A++++ +R + M+ M ++G+ + +++G +
Sbjct: 889 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948
Query: 361 RVDEVSFLFRQML-HEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL- 418
+ + +M+ H+ PN A V L + GK ++ R K L+
Sbjct: 949 DIKTAFVVKEEMIAHKICPPNVAESAMVRALA------KCGKADEATLLLRFMLKMKLVP 1002
Query: 419 ---LWNTLVDMYARSGKVLEAKRVFDSLT----RRDEVTYTAMIRGYGMKGEGQMALNIF 471
+ TL+ + ++G V+EA + ++ + D V+Y +I G KG+ +A ++
Sbjct: 1003 TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1062
Query: 472 EEM 474
EEM
Sbjct: 1063 EEM 1065
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/566 (21%), Positives = 234/566 (41%), Gaps = 61/566 (10%)
Query: 74 GFDQNTIMLPRLVSFYARFNLFDDACIV----TESSSSLEPLHWNMLISMFVR-NELFVE 128
GF + L+S +A + +A V E + +N+++++F + + +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 129 ALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVS 188
S KM + PD +TY +++ C +V + ++ + +NAL+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 189 MYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM 244
+Y K + + A + + M V++N++IS YA G EA +L +M E+G +
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHG 304
++ + T+ G+ AG + A+ + +MR + N C+
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNA--------GCKPNICTF------------ 422
Query: 305 HAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHMD 360
NA I MY G +F + GL +TWN +L+ F
Sbjct: 423 --------------NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLW 420
EVS +F++M G P T +++ +R + + + ++ + L +
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD-LSTY 527
Query: 421 NTLVDMYARSGKVLEAKRVF----DSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK 476
NT++ AR G ++++V D + +E+TY +++ Y E + ++ EE+
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 477 FKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLN 536
I+P V + ++ CS L+ + + F E+ + G P I M ++GR ++
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 537 KAKEIITRMPYKP-TPAMWATLIGACRIHGNTVLGEWAAGKLLE-----MKPDHSGYYIL 590
KA ++ M + TP+M AT +H + + L E +KPD Y +
Sbjct: 647 KANGVLDYMKERGFTPSM-ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 591 IANMYAAAGCWSELAEVRTYMRNLGV 616
I Y + + + + MRN G+
Sbjct: 706 IY-AYCRNTRMRDASRIFSEMRNSGI 730
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 197/444 (44%), Gaps = 33/444 (7%)
Query: 64 KQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDAC----IVTESSSSLEPLHWNMLISM 119
K L+ V++ GF + + L+S YAR + D+A + E + + + L+S
Sbjct: 335 KVLNEMVLN-GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 120 FVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWS 179
F R A+S + +M P+ T+ + +K G +++ I V +
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNM------PERDDVSWNTIISCYASRGTWGEAFKL 233
+ N L++++ + G +F M PER+ ++NT+IS Y+ G++ +A +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQAMTV 511
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHI 293
+ RM + GV ++ +NT+ G ++ + K+L++M D L CS +
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME-----DGRCKPNELTYCSLL 566
Query: 294 GALKLGKEI---HGHAVRTGFDVLDN---VRNALITMYSRCGDLGHAYMLFQRMEEKG-- 345
A GKEI H A V++ + L+ + S+C L A F ++E+G
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
Query: 346 --LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
+ T N+M+S + V + + + M G P+ T S++ + +R A+ +E
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYG 459
I+ + K ++ +NT++ Y R+ ++ +A R+F + D +TY I Y
Sbjct: 687 LREILAK-GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 460 MKGEGQMALNIFEEMCKFKIKPDH 483
+ A+ + M K +P+
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQ 769
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 137/343 (39%), Gaps = 43/343 (12%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N LIS + R F +A++ YR+ML V PD TY +VL A +V +E
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 173 VGSMGWSLFVHNALVSMYAKFGKL----EVARHLFDNMPERDDVSWNTIISCYASRGTWG 228
G + + +L+ YA ++ +A ++ + E V T++ +
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN 288
EA + F ++E G +I N+M Y MV N
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIY----------------------GRRQMVAKAN 649
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL-- 346
G L KE GF N+L+ M+SR D G + + + + KG+
Sbjct: 650 -----GVLDYMKE-------RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 347 --ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH 404
I++N ++ + R+ + S +F +M + G P+ +T + + A + +
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 405 CYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD 447
Y++K + +N++VD Y + + EAK + L D
Sbjct: 758 RYMIK-HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 208/462 (45%), Gaps = 26/462 (5%)
Query: 69 QVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLE----PLHWNMLI-SMFVRN 123
+++ LG++ + + L L++ Y +A + + +E + +N LI +F+ N
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 124 ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH 183
+ EA++ +M+ + PD FTY +V+ + D + + K +E G + + ++
Sbjct: 200 KA-SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 184 NALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQE 239
++ + + A +LF M + + V++N++I C + G W +A +L M E
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNA-CSHIGALK 297
+ N++ ++ + ++ G A KL +M + SI D +N C H +
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD---R 375
Query: 298 LGKEIHGHAVRTGFDVLDNV--RNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNA 351
L + H + D NV N LI + + + LF+ M ++GL +T+N
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
++ G D +F++M+ +G P+ +T + +L + L+ Y+ K
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK-S 494
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDEVTYTAMIRGYGMKGEGQMA 467
+ + + +N +++ ++GKV + +F SL+ + + + YT MI G+ KG + A
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
+F EM + P+ ++ A G A L +EM
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 209/501 (41%), Gaps = 30/501 (5%)
Query: 84 RLVSFYARFNLFDDACIVTESSSSL----EPLHWNMLISMFVRNELFVEALSAYRKMLRK 139
+L+S A+ N FD + E +L + +N+LI+ F R AL+ KM++
Sbjct: 85 KLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKL 144
Query: 140 QVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVA 199
PD T S+L + V + + V + N L+ K A
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 200 RHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGG 255
L D M R D ++ T+++ RG A L ++M++ +E +++I+ T+
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 256 YLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC-SHIGALKLGKEIHGHAVRTGFDVL 314
+ N AL L ++M +V L C + G + + +
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 315 DNVRNALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAMLSGFAHMDRVDEVSFLFR 370
+ALI + + G L A L+ M ++ + T++++++GF DR+DE +F
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 371 QMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYL----LLWNTLVDM 426
M+ + PN VT +++ + ++ G E RE + L + +NTL+
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF-----REMSQRGLVGNTVTYNTLIQG 439
Query: 427 YARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
++G A+++F + D +TY+ ++ G G+ + AL +FE + K K++PD
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 483 HVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEII 542
++ +G V G LF + G+ P + Y M F R GL +A +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 543 TRMPYK---PTPAMWATLIGA 560
M P + TLI A
Sbjct: 559 REMKEDGTLPNSGTYNTLIRA 579
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 189/446 (42%), Gaps = 38/446 (8%)
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGEAFKLF 234
S+ N L+S AK K ++ L + M D S+N +I+C+ R A +
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 235 ERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSH-- 292
+M + G E +I+ +++ GY H A+ L+ QM +++ V N H
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM---FVMEYQPNTVTFNTLIHGL 195
Query: 293 ------IGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME---- 342
A+ L + + V N L + GD+ A L ++ME
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL----CKRGDIDLALSLLKKMEKGKI 251
Query: 343 EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKE 402
E ++ + ++ + V++ LF +M ++G PN VT S++
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGY 458
+++R + ++ ++ L+D + + GK++EA++++D + +R D TY+++I G+
Sbjct: 312 LLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 459 GMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPR 518
M A ++FE M P+ V ++ + V +G LF+EM G++
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGN 429
Query: 519 IEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWAT----LIGAC---RIHGNTVLGE 571
Y + +AG + A++I +M P T L G C ++ V+ E
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 572 WAAGKLLEMKPDHSGYYILIANMYAA 597
+ +M+PD Y I+I M A
Sbjct: 490 YLQKS--KMEPDIYTYNIMIEGMCKA 513
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 129 ALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVS 188
A ++KM+ V PD TY +L + + V + ++ M ++ +N ++
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 189 MYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM 244
K GK+E LF ++ + + + + T+IS + +G EA LF M+E+G
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMRT 274
N +NT+ L G+ + +L+ +MR+
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEMRS 598
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 212/484 (43%), Gaps = 65/484 (13%)
Query: 167 VHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYA 222
V++ I +G +++ N +V+ K GK+E + E+ D V++NT+IS Y+
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 223 SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHV 281
S+G EAF+L M +G + +NT+ G G ++ A ++ ++M R+ + D
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 282 A-MVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLF 338
+ + AC ++ K R DV+ ++ ++++++++R G+L A M F
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSR---DVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 339 QRMEEKGLI---------------------------------------TWNAMLSGFAHM 359
++E GLI T+N +L G
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
+ E LF +M P+ T+ ++ ++ NLQ+ E MK ++ + ++
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF-QKMKEKRIRLDVVT 517
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRRD----EVTYTAMIRGYGMKGEGQMALNIFEEMC 475
+NTL+D + + G + AK ++ + ++ ++Y+ ++ KG A +++EM
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 476 KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLL 535
IKP + +++ SG + G+ ++M+ + G +P Y + F R +
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENM 636
Query: 536 NKAKEIITRMPYKP---TPAMW---ATLIGACRIHGNTVLGEWAAGKLLE--MKPDHSGY 587
+KA ++ +M + P ++ + L G CR E K++E + PD S Y
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR-QNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 588 YILI 591
+I
Sbjct: 696 TCMI 699
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/445 (19%), Positives = 190/445 (42%), Gaps = 54/445 (12%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N +I+ ++ + A + +MLR + PD TY S+L + D +V +
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWG 228
+ L ++++S++ + G L+ A F+++ E D+V + +I Y +G
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGL 287
A L M ++G M+++ +NT+ G A KL ++M ++ D + +
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI-- 485
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK--- 344
LI + + G+L +A LFQ+M+EK
Sbjct: 486 ---------------------------------LIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 345 -GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVL-PLCARIANLQHGKE 402
++T+N +L GF + +D ++ M+ + P ++ + ++ LC++ + +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGY 458
+ I K K +++ N+++ Y RSG + + + + D ++Y +I G+
Sbjct: 573 WDEMISK--NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Query: 459 GMKGEGQMALNIFEEMCKFK--IKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGII 516
+ A + ++M + + + PD ++L + + +V+ ++M+ + G+
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI-ERGVN 689
Query: 517 PRIEHYACMADLFGRAGLLNKAKEI 541
P Y CM + F L +A I
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 159/374 (42%), Gaps = 22/374 (5%)
Query: 127 VEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNAL 186
VE + M + V+PD + S++ + + +++ + ++ L
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 187 VSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGV 242
+ Y + G + VA +L + M ++ D V++NTI+ R GEA KLF M E +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 243 EMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKE 301
+ + G+ GN + A++L +M+ I LD V L+ +G + KE
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 302 IHGHAVRTGFDVLDNVRNALITMYSRC--GDLGHAYMLFQRMEEKGL----ITWNAMLSG 355
I V ++L + I + + C G L A+ ++ M K + + N+M+ G
Sbjct: 537 IWADMVSK--EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH-CYIMKREQ-- 412
+ + +M+ EG P+ ++ +++ R N+ K F M+ EQ
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENM--SKAFGLVKKMEEEQGG 652
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMAL 468
+ +N+++ + R ++ EA+ V + R D TYT MI G+ + A
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Query: 469 NIFEEMCKFKIKPD 482
I +EM + PD
Sbjct: 713 RIHDEMLQRGFSPD 726
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 144/319 (45%), Gaps = 46/319 (14%)
Query: 103 ESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCA 162
+ +++ + +N ++ + ++ EA + +M + + PD +T ++ +L +
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 163 SGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERD----DVSWNTII 218
+ +E+ + ++ + + +N L+ + K G ++ A+ ++ +M ++ +S++ ++
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 219 SCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL 278
+ S+G EAF++++ M + ++ ++I N+M GY +GN L +M
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM------ 611
Query: 279 DHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVR-NALITMYSRCGDLGHAYML 337
+ GF V D + N LI + R ++ A+ L
Sbjct: 612 ----------------------------ISEGF-VPDCISYNTLIYGFVREENMSKAFGL 642
Query: 338 FQRMEEK--GLI----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLC 391
++MEE+ GL+ T+N++L GF +++ E + R+M+ G P+ T ++
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Query: 392 ARIANLQHGKEFHCYIMKR 410
NL H +++R
Sbjct: 703 VSQDNLTEAFRIHDEMLQR 721
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 108/244 (44%), Gaps = 10/244 (4%)
Query: 310 GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAMLSGFAHMDRVDEV 365
GF V + NALI R G + A+ ++Q + G + T N M++ ++++V
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 366 SFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVD 425
Q+ +G P+ VT +++ + ++ E M + F + +NT+++
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM-NAMPGKGFSPGVYTYNTVIN 313
Query: 426 MYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
+ GK AK VF + R D TY +++ KG+ +F +M + P
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
D V ++++ + SG + + + F V + G+IP Y + + R G+++ A +
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNS-VKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 542 ITRM 545
M
Sbjct: 433 RNEM 436
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 205/463 (44%), Gaps = 22/463 (4%)
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL----EPLHWNMLI-SMF 120
L +++ LG++ + + L L++ Y DA + + + + + + LI +F
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 121 VRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL 180
+ N+ EA++ +M+++ P+ TY V+ + D + +E + +
Sbjct: 127 LHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFER 236
+ N ++ K+ ++ A +LF M + + V+++++ISC S G W +A +L
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNA-CSHIG 294
M E+ + N++ +N + ++ G F A KL M + SI D +N C H
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 295 ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWN 350
K + + F LD N LI + + + LF+ M +GL +T+
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTY-NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 351 AMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR 410
++ G H D +F+QM+ +G P+ +T + +L L+ E Y M++
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY-MQK 423
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDEVTYTAMIRGYGMKGEGQM 466
+ K + ++ T+++ ++GKV + +F SL+ + + VTY MI G K Q
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
A + ++M + PD ++ A G A L +EM
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 182/443 (41%), Gaps = 68/443 (15%)
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVS-----WNTIISCYASRGTWGEAFKL 233
S+F N L+S AK K ++ L + M +R +S +N +I+C+ R A L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 234 FERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM----RTSIHLDHVAMVVGL-- 287
+M + G E +I+ +++ GY H A+ L+ QM + ++ GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 288 -NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME---- 342
N S A+ L + + V N L + GD+ A+ L +ME
Sbjct: 128 HNKASE--AVALVDRMVQRGCQPNLVTYGVVVNGL----CKRGDIDLAFNLLNKMEAAKI 181
Query: 343 EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKE 402
E ++ +N ++ VD+ LF++M +G PN VT +S++ +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 403 FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGY 458
++++ + L+ +N L+D + + GK +EA+++ D + +R D TY ++I G+
Sbjct: 242 LLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 459 GMKGEGQMALNIFEEM-------------------CKFK----------------IKPDH 483
M A +FE M CK K + D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 484 VAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIIT 543
V ++ H G Q +F++MV D G+ P I Y+ + D G L KA E+
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 544 RM---PYKPTPAMWATLI-GACR 562
M K ++ T+I G C+
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCK 442
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 215/515 (41%), Gaps = 56/515 (10%)
Query: 84 RLVSFYARFNLFDDACIVTESSSSLEPLH----WNMLISMFVRNELFVEALSAYRKMLRK 139
+L+S A+ FD + E L H +N+LI+ F R AL+ KM++
Sbjct: 15 KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 74
Query: 140 QVIPDEFTYPSVLKA-C-GELLDCASGVEVHKAIEVG---------SMGWSLFVHN---- 184
P T S+L C G+ + A + V + +E+G ++ LF+HN
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVAL-VDQMVEMGYRPDTITFTTLIHGLFLHNKASE 133
Query: 185 ---------------------ALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIIS 219
+V+ K G +++A +L + M E D V +NTII
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 220 CYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHL 278
+A LF+ M+ +G+ N++ ++++ G + A +LLS M I+
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 279 DHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLF 338
+ V ++A G +++H ++ D N+LI + L A +F
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 339 QRMEEK----GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARI 394
+ M K L T+N ++ GF RV++ + LFR+M H G + VT +++
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 395 ANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFD----SLTRRDEVT 450
+ + ++ M + ++ ++ L+D +GK+ +A VFD S + D
Sbjct: 374 GDCDNAQKVF-KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 451 YTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV 510
YT MI G G+ ++F + +KP+ V +++ L+ + L ++M
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 511 DDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
+D G +P Y + R G + E+I M
Sbjct: 493 ED-GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 43/255 (16%)
Query: 63 GKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTE---SSSSLEPLH-WNMLIS 118
++LH +I D + L++ + + D A + E S L +N LI
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 119 MFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGW 178
F +++ + +R+M + ++ D TY ++++ DC + +V K + +
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPER----------------------DD----- 211
+ ++ L+ GKLE A +FD M + DD
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 212 ------------VSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHA 259
V++NT+IS S+ EA+ L ++M+E+G + +NT+ +L
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513
Query: 260 GNFKGALKLLSQMRT 274
G+ + +L+ +MR+
Sbjct: 514 GDKAASAELIREMRS 528
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 198/438 (45%), Gaps = 26/438 (5%)
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL----EPLHWNMLI-SMF 120
L +++ LG++ + + L L++ Y DA + + + + + + LI +F
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 121 VRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL 180
+ N+ EA++ +M+++ P+ TY V+ + D + +E + ++
Sbjct: 202 LHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFER 236
+++ ++ K+ + A +LF M + + ++++++ISC + W +A +L
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNA-CSHIG 294
M E + N++ +N + ++ G A KL +M + SI D +N C H
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD- 379
Query: 295 ALKLGKEIHGHAVRTGFDVLDNV--RNALITMYSRCGDLGHAYMLFQRMEEKGL----IT 348
+L + H + D NV N LI + + + LF+ M ++GL +T
Sbjct: 380 --RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 349 WNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIM 408
+ ++ GF D +F+QM+ +G PN +T ++L + L+ Y +
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY-L 496
Query: 409 KREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDEVTYTAMIRGYGMKGEG 464
+R + + + +N +++ ++GKV + +F SL+ + D + Y MI G+ KG
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 465 QMALNIFEEMCKFKIKPD 482
+ A +F +M + PD
Sbjct: 557 EEADALFRKMREDGPLPD 574
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 209/487 (42%), Gaps = 56/487 (11%)
Query: 84 RLVSFYARFNLFDDACIVTESSSSLEPLH----WNMLISMFVRNELFVEALSAYRKMLRK 139
+L+S A+ FD + E L H +N+LI+ F R AL+ KM++
Sbjct: 90 KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 140 QVIPDEFTYPSVLKA-C-GELLDCASGVEVHKAIEVG---------SMGWSLFVHN---- 184
P T S+L C G+ + A + V + +E+G ++ LF+HN
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVAL-VDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 185 ---------------------ALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIIS 219
+V+ K G +++A +L + M E + V ++T+I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 220 CYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHL 278
+A LF M+ +GV N+I ++++ + + A +LLS M I+
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 279 DHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLF 338
+ V ++A G L ++++ ++ D ++LI + L A +F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 339 QRMEEK----GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARI 394
+ M K ++T+N +++GF R+DE LFR+M G N VT +++ +
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 395 ANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDE----VT 450
+ + + M + ++ +NTL+D ++GK+ +A VF+ L R T
Sbjct: 449 RDCDNAQMVF-KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 451 YTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMV 510
Y MI G G+ + ++F + +KPD + +++ GL + LF++M
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 511 DDYGIIP 517
+D G +P
Sbjct: 568 ED-GPLP 573
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 8/222 (3%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTE--SSSSLEP--LHWNM 115
L ++L+ ++I D + L++ + + D+A + E S P + +N
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
LI+ F + + E + +R+M ++ ++ + TY +++ + DC + V K +
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGEAF 231
+ ++ +N L+ K GKLE A +F+ + E ++N +I G + +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR 273
LF + +GV+ ++II+NTM G+ G + A L +MR
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 119/291 (40%), Gaps = 25/291 (8%)
Query: 319 NALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAMLSGFAHMDRVDEVSFLFRQMLH 374
N L++ ++ L ++M+ G L T+N +++ F ++ L +M+
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 375 EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ-----FKEYLLLWNTLVDMYAR 429
G EP+ VT++S+L HGK + +Q ++ + + TL+
Sbjct: 149 LGYEPSIVTLSSLL------NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 430 SGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA 485
K EA + D + +R + VTY ++ G +G+ +A N+ +M KI+ + V
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 486 MVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
V+ + LF EM ++ G+ P + Y+ + + A +++ M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 546 ---PYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLE--MKPDHSGYYILI 591
P + LI A G V E ++++ + PD Y LI
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 16/292 (5%)
Query: 377 AEPNYVTIASVL----PLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGK 432
A NYV S L +C LQ K H I + L + L++MY+ G
Sbjct: 246 ASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLD-LSSNHVLLEMYSNCGL 304
Query: 433 VLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
EA VF+ ++ ++ T+ +IR + G G+ A+++F + PD + A
Sbjct: 305 ANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYA 364
Query: 493 CSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPA 552
C G V +G + F+ M DYGI P IE Y + +++ G L++A E + RMP +P
Sbjct: 365 CGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVD 424
Query: 553 MWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMR 612
+W TL+ R+HGN LG++ A + + P N + G A + +
Sbjct: 425 VWETLMNLSRVHGNLELGDYCAEVVEFLDPTR-------LNKQSREGFIPVKA---SDVE 474
Query: 613 NLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKDAGYI 664
+KK G V F GDT+ P E++ L+ L M + GY+
Sbjct: 475 KESLKKRSGILH-GVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYV 525
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 19/187 (10%)
Query: 260 GNFKGAL---KLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGH--AVRTGFDVL 314
G K AL +L+ M + L + + + C L+ K +HG A + D+
Sbjct: 233 GKVKKALYTIDILASMNYVVDLSRLLRLAKI--CGEAEGLQEAKTVHGKISASVSHLDLS 290
Query: 315 DNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLH 374
N + L+ MYS CG A +F++M EK L TW ++ FA ++ +F +
Sbjct: 291 SN--HVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE 348
Query: 375 EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE-----QFKEYLLLWNTLVDMYAR 429
EG P+ + C + ++ G H M R+ ++Y+ +LV+MYA
Sbjct: 349 EGNIPDGQLFRGIFYACGMLGDVDEGL-LHFESMSRDYGIAPSIEDYV----SLVEMYAL 403
Query: 430 SGKVLEA 436
G + EA
Sbjct: 404 PGFLDEA 410
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%)
Query: 153 KACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDV 212
K CGE VH I L ++ L+ MY+ G A +F+ M E++
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 213 SWNTIISCYASRGTWGEAFKLFERMQEEG 241
+W II C+A G +A +F R +EEG
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEG 350
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 212/481 (44%), Gaps = 30/481 (6%)
Query: 55 INVNSLSPGKQLH------AQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL 108
I +N L QL +++ LG+ + + L L++ + N +A + + +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 109 ----EPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASG 164
+ + + L+ ++ EA++ +M+ K PD TY +V+ + +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 165 VEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLF---DNMPERDDV-SWNTIISC 220
+ + +E G + + +++ ++ K+ ++ A +LF DN R DV +++++ISC
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 221 YASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLD 279
+ G W +A +L M E + N++ +N++ + G A KL +M + SI +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 280 HVAMVVGLNA-CSHIGALKLGKEIHGHAVRTGFDVLDNV--RNALITMYSRCGDLGHAYM 336
V +N C H L ++I V D L +V N LI + + +
Sbjct: 345 IVTYNSLINGFCMH-DRLDEAQQIFTLMVSK--DCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 337 LFQRMEEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA 392
LF+ M +GL +T+ ++ GF D +F+QM+ +G PN +T ++L
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 393 RIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDE 448
+ L+ Y+ K + + + +N + + ++GKV + +F SL+ + D
Sbjct: 462 KNGKLEKAMVVFEYLQK-SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 449 VTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQE 508
+ Y MI G+ KG + A +F +M + PD ++ A G A L +E
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Query: 509 M 509
M
Sbjct: 581 M 581
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 111/258 (43%), Gaps = 43/258 (16%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDA----CIVTESSSSLEPLHWNM 115
L ++L ++I D N + L++ + + D+A ++ + + +N
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
LI+ F + + V+ + +R M R+ ++ + TY +++ + DC + V K +
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER-------------------------- 209
+ ++ +N L+ K GKLE A +F+ + +
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 210 -------------DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGY 256
D +++NT+IS + +G EA+ LF +M+E+G + +NT+ +
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Query: 257 LHAGNFKGALKLLSQMRT 274
L G+ + +L+ +MR+
Sbjct: 566 LRDGDKAASAELIKEMRS 583
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 21/260 (8%)
Query: 346 LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHC 405
L T+N M++ ++ + +M+ G P+ VT+ S+L HG
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL------NGFCHGNRISE 153
Query: 406 YIMKREQFKEY-----LLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIR 456
+ +Q E + + TLV + K EA + + + + D VTY A+I
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 457 GYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGII 516
G +GE +ALN+ +M K KI+ D V V+ + V LF EM D+ GI
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM-DNKGIR 272
Query: 517 PRIEHYACMADLFGRAGLLNKAKEIITRM---PYKPTPAMWATLIGACRIHGNTVLGEWA 573
P + Y+ + G + A +++ M P + +LI A G + E
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 574 AGKLLE--MKPDHSGYYILI 591
++++ + P+ Y LI
Sbjct: 333 FDEMIQRSIDPNIVTYNSLI 352
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 188/435 (43%), Gaps = 23/435 (5%)
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALV 187
+A+ +R M++ + +P + + A + + + K +E + S++ + ++
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 188 SMYAKFGKLEVARHLFDNMP-------ERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
+ + + KL A F M E D V +NT+++ EA +L +RM E
Sbjct: 131 NCFCRCRKLSYA---FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLG 299
G + +I NT+ G G A+ L+ +M T + V LN G L
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 300 KEIHGHAVRTGFDVLDNVR-NALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAMLS 354
E+ LD V+ + +I + G L +A+ LF ME KG +IT+N ++
Sbjct: 248 MELLRKMEERNIK-LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
GF + R D+ + L R M+ PN VT + ++ + L+ + +M+R
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIA 365
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNI 470
+ +N+L+D + + ++ EA ++ D + + D +T+ +I GY L +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
F EM + + V ++ SG + + LFQEMV + P I Y + D
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV-SRRVRPDIVSYKILLDGLC 484
Query: 531 RAGLLNKAKEIITRM 545
G L KA EI ++
Sbjct: 485 DNGELEKALEIFGKI 499
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 154/346 (44%), Gaps = 51/346 (14%)
Query: 165 VEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISC 220
V + + +E G + + ++++ K G+ +A L M ER D V ++ II
Sbjct: 214 VLIDRMVETGFQPNEV-TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 221 YASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLD 279
G+ AF LF M+ +G + +II +NT+ GG+ +AG + KLL M + I +
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 280 HVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQ 339
V V +++ G L+ ++ ++ G N+LI + + L A +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 340 RMEEKG----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIA 395
M KG ++T+N +++G+ +R+D+ LFR+M G N VT
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT------------ 440
Query: 396 NLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTY 451
+NTLV + +SGK+ AK++F + R D V+Y
Sbjct: 441 ------------------------YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 452 TAMIRGYGMKGEGQMALNIFEEMCKFKIKPD-HVAMVAVLTACSHS 496
++ G GE + AL IF ++ K K++ D + M+ + C+ S
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/490 (19%), Positives = 196/490 (40%), Gaps = 72/490 (14%)
Query: 69 QVISLGFDQNTIMLPRLVSFYARFN-LFDDACIVTESSSSLE-----------P--LHWN 114
+++ LG++ +T++ FN L + C+ S +LE P + N
Sbjct: 148 KIMKLGYEPDTVI----------FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVG 174
L++ N +A+ +M+ P+E TY VL + A +E+ + +E
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 175 SMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGEA 230
++ ++ ++ K G L+ A +LF+ M + D +++NT+I + + G W +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNA 289
KL M + + N++ ++ + ++ G + A +LL +M + I + + ++
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 290 CSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI-- 347
L+ ++ + G D N LI Y + + LF+ M +G+I
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 348 --TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHC 405
T+N ++ GF +++ LF++M+ P+ V+ +L L+ E
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 406 YIMKREQFKE---YLLL-------------------------------WNTLVDMYARSG 431
I K + + Y+++ +N ++ R
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 432 KVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMV 487
+ +A +F +T DE+TY +IR + + A + EEM K P V+ V
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM-KSSGFPADVSTV 616
Query: 488 AVLTACSHSG 497
++ SG
Sbjct: 617 KMVINMLSSG 626
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 209/467 (44%), Gaps = 30/467 (6%)
Query: 66 LHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL----EPLHWNMLI-SMF 120
L +++ LG++ + + L L++ Y DA + + + + + + LI +F
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 121 VRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSL 180
+ N+ EA++ +M+++ P+ TY V+ + D + + +E + +
Sbjct: 202 LHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 181 FVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFER 236
+ N ++ K+ ++ A +LF M + + V+++++ISC S G W +A +L
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLD---HVAMVVGLNACSH 292
M E+ + N++ +N + ++ G F A KL M + SI D + ++V G C H
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF--CMH 378
Query: 293 IGALKLGKEIHGHAVRTGFDVLDNV--RNALITMYSRCGDLGHAYMLFQRMEEKGL---- 346
+L K D +V N LI + + + LF+ M +GL
Sbjct: 379 D---RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
+T+ ++ G H D +F+QM+ +G P+ +T + +L L+ E Y
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDEVTYTAMIRGYGMKG 462
M++ + K + ++ T+++ ++GKV + +F SL+ + + VTY MI G K
Sbjct: 496 -MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Query: 463 EGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
Q A + ++M + P+ ++ A G A L +EM
Sbjct: 555 LLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 177/442 (40%), Gaps = 66/442 (14%)
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDV----SWNTIISCYASRGTWGEAFKLF 234
S+ N L+S AK K +V L + M + V ++N +I+C+ R A L
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 235 ERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIH----LDHVAMVVGL--- 287
+M + G E +I+ +++ GY H A+ L+ QM + + ++ GL
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME----E 343
N S A+ L + + V N L + GD A L +ME E
Sbjct: 204 NKASE--AVALVDRMVQRGCQPNLVTYGVVVNGL----CKRGDTDLALNLLNKMEAAKIE 257
Query: 344 KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
++ +N ++ VD+ LF++M +G PN VT +S++ +
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----------------- 446
++++ + L+ +N L+D + + GK +EA++++D + +R
Sbjct: 318 LSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 447 ----------------------DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHV 484
D VTY +I+G+ + +F EM + D V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
++ H G Q +F++MV D G+ P I Y+ + D G L KA E+
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 545 M---PYKPTPAMWATLI-GACR 562
M K ++ T+I G C+
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCK 517
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 129/559 (23%), Positives = 228/559 (40%), Gaps = 74/559 (13%)
Query: 84 RLVSFYARFNLFDDACIVTESSSSLEPLH----WNMLISMFVRNELFVEALSAYRKMLRK 139
+L+S A+ FD + E LE +H +N+LI+ F R AL+ KM++
Sbjct: 90 KLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 140 QVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVA 199
P T S+L Y ++ A
Sbjct: 150 GYEPSIVTLSSLLNG-----------------------------------YCHGKRISDA 174
Query: 200 RHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGG 255
L D M E D +++ T+I EA L +RM + G + N++ + + G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 256 YLHAGNFKGALKLLSQMRTS-IHLDHV---AMVVGLNACSHI-GALKLGKEIHGHAVRTG 310
G+ AL LL++M + I D V ++ L H+ AL L KE+ +R
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 311 FDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK----GLITWNAMLSGFAHMDRVDEVS 366
++ + L + Y R D A L M EK L+T+NA++ F + E
Sbjct: 295 VVTYSSLISCLCS-YGRWSD---ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 367 FLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDM 426
L+ M+ +P+ T S++ L K+ +++ ++ F + ++ +NTL+
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD-VVTYNTLIKG 409
Query: 427 YARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
+ +S +V + +F ++ R D VTYT +I+G G+ A +F++M + PD
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 483 HVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEII 542
+ +L ++G + + +F M I I Y M + +AG ++ ++
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 543 TRMPY---KPTPAMWATLI-GACRIHGNTVLGEWAAGKLLEMKPD----HSGYYILIANM 594
+ KP + T+I G C + L + A L +MK D +SG Y +
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGLC----SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Query: 595 YAAAGCWSELAEVRTYMRN 613
+ G + AE+ MR+
Sbjct: 585 HLRDGDKAASAELIREMRS 603
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 185/423 (43%), Gaps = 24/423 (5%)
Query: 142 IPDEFTYPSVLKACGELLDCASGVEVHKAIEV---GSMGWSLFVHNALVSMYAKFGKLEV 198
+PD TY ++ C +G E++ A+ V S+ + +N ++ GKL+
Sbjct: 169 VPDVITYNVMISGY-----CKAG-EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 199 ARHLFDNMPERD---DV-SWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAG 254
A + D M +RD DV ++ +I G A KL + M++ G +++ +N +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 255 GYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDV 313
G G A+K L+ M +S + + + L + G +++ +R GF
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 314 LDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHMDRVDEVSFLF 369
N LI R G LG A + ++M + G +++N +L GF ++D
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 370 RQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYAR 429
+M+ G P+ VT ++L + ++ E + + L+ +NT++D A+
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAK 461
Query: 430 SGKVLEAKRVFDSLTRRD----EVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA 485
+GK +A ++ D + +D +TY++++ G +G+ A+ F E + I+P+ V
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 486 MVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
+++ S + + F + + G P Y + + G+ +A E++ +
Sbjct: 522 FNSIMLGLCKSRQTDRA-IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Query: 546 PYK 548
K
Sbjct: 581 CNK 583
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 164/393 (41%), Gaps = 27/393 (6%)
Query: 192 KFGKLEVARHLFDNM------PERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
+ G+LE +NM P D + T+I + G +A K+ E ++ G +
Sbjct: 114 RTGELEEGFKFLENMVYHGNVP--DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGH 305
+I +N M GY AG AL +L +M S+ D V L + G LK E+
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM--SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 306 AVRTGFDVLDNVRNALITMYSRCGD--LGHAYMLFQRMEEKG----LITWNAMLSGFAHM 359
++ D +V I + + C D +GHA L M ++G ++T+N +++G
Sbjct: 230 MLQR--DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
R+DE M G +PN +T +L ++ ++ R+ F ++
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML-RKGFSPSVVT 346
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
+N L++ R G + A + + + + + ++Y ++ G+ + + A+ E M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 476 KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLL 535
PD V +LTA G V + ++ G P + Y + D +AG
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL-SSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 536 NKAKEIITRM---PYKPTPAMWATLIGACRIHG 565
KA +++ M KP +++L+G G
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/438 (19%), Positives = 163/438 (37%), Gaps = 81/438 (18%)
Query: 85 LVSFYARFNLFDDACIVTES-SSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIP 143
++S Y + ++A V + S S + + +N ++ + +A+ +ML++ P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 144 DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWS--LFVHNALVSMYAKFGKLEVARH 201
D TY +++A D G + E+ G + + +N LV+ K G+L+ A
Sbjct: 238 DVITYTILIEA--TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 202 LFDNMP----ERDDVSWNTIISCYASRGTW------------------------------ 227
++MP + + ++ N I+ S G W
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 228 -----GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHV 281
G A + E+M + G + N + +N + G+ A++ L +M + + D V
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 282 AMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRM 341
L A G ++ EI G + N +I ++ G G A L M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 342 EEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANL 397
K L IT+++++ G + +VDE F + G PN VT S++ +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 398 QHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRG 457
+F +++ R + +E +YT +I G
Sbjct: 536 DRAIDFLVFMINRG--------------------------------CKPNETSYTILIEG 563
Query: 458 YGMKGEGQMALNIFEEMC 475
+G + AL + E+C
Sbjct: 564 LAYEGMAKEALELLNELC 581
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 127/561 (22%), Positives = 222/561 (39%), Gaps = 66/561 (11%)
Query: 80 IMLPRLVSFYARFNLFDDACIVTESSSSLEPLH----WNMLISMFVRNELFVEALSAYRK 135
I +L+S A+ N FD + E +L H +++LI+ F R AL+ K
Sbjct: 82 IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 136 MLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGK 195
M++ P+ T S+L + V + + V + N L+ K
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 196 LEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNT 251
A L D M + D V++ +++ RG AF L +M++ +E ++I+NT
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 252 MAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC-SHIGALKLGKEIHGHAVRTG 310
+ G + AL L +M T +V L +C + G + +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 311 FDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK----GLITWNAMLSGFAHMDRVDEVS 366
+ +ALI + + G L A L+ M ++ ++T++++++GF DR+DE
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 367 FLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDM 426
+F M+ + P+ VT +NTL+
Sbjct: 382 QMFEFMVSKHCFPDVVT------------------------------------YNTLIKG 405
Query: 427 YARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
+ + +V E VF +++R + VTY +I+G G+ MA IF+EM + P+
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 483 HVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEII 542
+ +L +G + + V+F E + + P I Y M + +AG + ++
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 543 TRMPY---KPTPAMWATLI-GACRIHGNTVLGEWAAGKLLEMKPD----HSGYYILIANM 594
+ KP + T+I G CR E A EMK D +SG Y +
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSK----EEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 595 YAAAGCWSELAEVRTYMRNLG 615
G AE+ MR+ G
Sbjct: 581 RLRDGDREASAELIKEMRSCG 601
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL----EPLHWNM 115
L ++L+ +++ D + + L++ + + D+A + E S + + +N
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA----- 170
LI F + + E + +R+M ++ ++ + TY +++ + DC E+ K
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 171 ------------------------------IEVGSMGWSLFVHNALVSMYAKFGKLEVAR 200
++ M +++ +N ++ K GK+E
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 201 HLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGY 256
LF N+ + D V++NT+IS + +G+ EA LF+ M+E+G N +NT+
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 257 LHAGNFKGALKLLSQMRT 274
L G+ + + +L+ +MR+
Sbjct: 582 LRDGDREASAELIKEMRS 599
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/470 (20%), Positives = 200/470 (42%), Gaps = 54/470 (11%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL----EPLHW 113
+ LS + +++ LG+ + + L L++ + N +A + + + + + +
Sbjct: 124 SQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 183
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
L+ ++ EA++ +M+ K PD TY +V+ + + + + +E
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGE 229
G + + ++N ++ K+ ++ A LF+ M + D ++N +ISC + G W +
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL--DHVAMVVGL 287
A +L M E+ + +++ +N + ++ G A KL +M S H D VA
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY---- 359
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL- 346
N LI + + + +F+ M ++GL
Sbjct: 360 -------------------------------NTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 347 ---ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
+T+ ++ GF D +F+QM+ +G P+ +T +L N++
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDEVTYTAMIRGYG 459
Y+ KR+ K ++ + T+++ ++GKV + +F SL+ + + VTYT M+ G+
Sbjct: 449 FEYMQKRD-MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
KG + A +F EM + P+ ++ A G A L +EM
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 187/446 (41%), Gaps = 51/446 (11%)
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N L++ F EA++ +M+ PD T+ +++ + + V + + + V
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGE 229
L + A+++ K G+ ++A +L + M E D V +NTII +
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLN 288
AF LF +M+ +G++ ++ +N + + G + A +LLS M +I+ D V ++
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVR-NALITMYSRCGDLGHAYMLFQRMEEKGLI 347
A G L ++++ V++ D V N LI + + + +F+ M ++GL+
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 348 ----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
T+ ++ GF D +F+QM+ +G P+ +T
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT-------------------- 428
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDE----VTYTAMIRGYG 459
+N L+D +G V A VF+ + +RD VTYT MI
Sbjct: 429 ----------------YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI 519
G+ + ++F + +KP+ V +++ GL + LF EM +D G +P
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED-GPLPNS 531
Query: 520 EHYACMADLFGRAGLLNKAKEIITRM 545
Y + R G + E+I M
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEM 557
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 185/437 (42%), Gaps = 62/437 (14%)
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVE------VHKAIEVGSMGWSLF 181
EAL +M+ PD T +++ C SG E + K +E G ++
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGL-----CLSGKEAEAMLLIDKMVEYGCQPNAV- 229
Query: 182 VHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERM 237
+ ++++ K G+ +A L M ER D V ++ II G+ AF LF M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 238 QEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGAL 296
+ +G+ NII +N + GG+ +AG + KLL M + I+ + V V +++ G L
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 297 KLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAM 352
+ +E+H + G +LI + + L A + M KG + T+N +
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQ 412
++G+ +R+D+ LFR+M G + VT
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVT----------------------------- 440
Query: 413 FKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMAL 468
+NTL+ + GK+ AK +F + R + VTY ++ G GE + AL
Sbjct: 441 -------YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 469 NIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADL 528
IFE++ K K++ D ++ ++ V LF + G+ P ++ Y M
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPGVKTYNIMIGG 552
Query: 529 FGRAGLLNKAKEIITRM 545
+ G L++A+ + +M
Sbjct: 553 LCKKGPLSEAELLFRKM 569
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/522 (22%), Positives = 217/522 (41%), Gaps = 65/522 (12%)
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALV 187
+A+ +R M+ + +P + + A + + + K +E+ + +L+ + ++
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 188 SMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
+ + + KL +A + E + ++++T+I+ G EA +L +RM E G +
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEI 302
++I NT+ G +G A+ L+ +M + V LN G L E+
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 303 HGHAVRTGFDVLDNVR-NALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAMLSGFA 357
LD V+ + +I + G L +A+ LF ME KG +IT+N ++ GF
Sbjct: 251 LRKMEERNIK-LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 358 HMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH------------- 404
+ R D+ + L R M+ PN VT + ++ + L+ +E H
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 405 ---------C---YIMKREQFKEYLL---------LWNTLVDMYARSGKVLEAKRVFDSL 443
C ++ K Q + ++ +N L++ Y ++ ++ + +F +
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 444 TRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLV 499
+ R D VTY +I+G+ G+ +A +F+EM K+ P+ V +L +G
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 500 AQGQVLFQ-----EMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY---KPTP 551
+ +F+ +M D GI I H C A ++ A ++ +P KP
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMC------NASKVDDAWDLFCSLPLKGVKPGV 543
Query: 552 AMWATLIGACRIHGNTVLGEWAAGKLLE--MKPDHSGYYILI 591
+ +IG G E K+ E PD Y ILI
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 126/298 (42%), Gaps = 12/298 (4%)
Query: 92 FNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSV 151
FNLF++ + + + +N+LI F + + R M+++++ P+ T+ +
Sbjct: 283 FNLFNE---MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 152 LKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER-- 209
+ + + E+HK + + + +L+ + K L+ A + D M +
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 210 --DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALK 267
+ ++N +I+ Y + +LF +M GV + + +NT+ G+ G A +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 268 LLSQMRT-SIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYS 326
L +M + + + V + L+ G + EI ++ ++ + N +I
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 327 RCGDLGHAYMLFQRMEEKGLI----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN 380
+ A+ LF + KG+ T+N M+ G + E LFR+M +G P+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 107/241 (44%), Gaps = 11/241 (4%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSS----SLEPLHW 113
N L Q+ ++S G D N L++ Y + N DD + S + + +
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N LI F A +++M+ ++V P+ TY +L + + +E+ + IE
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGE 229
M + ++N ++ K++ A LF ++P + ++N +I +G E
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT---SIHLDHVAMVVG 286
A LF +M+E+G + +N + +L G+ ++KL+ +++ S+ + MV+
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Query: 287 L 287
+
Sbjct: 622 M 622
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 113/295 (38%), Gaps = 77/295 (26%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTE--SSSSLEP--LHWN 114
L ++LH ++I G +TI L+ + + N D A + + S +P +N
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVG 174
+LI+ + + + L +RKM + V+ D TY
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTY-------------------------- 441
Query: 175 SMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEA 230
N L+ + + GKL VA+ LF M R + V++ ++ G +A
Sbjct: 442 ---------NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 231 FKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC 290
++FE++++ +E++I I+N + G +A A L +
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL------------------ 534
Query: 291 SHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG 345
+ +K G + + N +I + G L A +LF++MEE G
Sbjct: 535 -PLKGVKPGVKTY---------------NIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 119/281 (42%), Gaps = 17/281 (6%)
Query: 338 FQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANL 397
F ++ L + SG + + D+ LFR M+H P + + + A+
Sbjct: 46 FSAFSDRNLSYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104
Query: 398 QHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTR----RDEVTYTA 453
C M+ + L + +++ + R K+ A + + + +T++
Sbjct: 105 DLVLAL-CKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFST 163
Query: 454 MIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDY 513
+I G ++G AL + + M + KPD + + ++ SG A+ +L +MV +Y
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EY 222
Query: 514 GIIPRIEHYACMADLFGRAGLLNKAKEIITRMP---YKPTPAMWATLI-GACRIHGNTVL 569
G P Y + ++ ++G A E++ +M K ++ +I G C+ HG ++
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK-HG-SLD 280
Query: 570 GEWAAGKLLEMKPDHSG---YYILIANMYAAAGCWSELAEV 607
+ +EMK + Y ILI + AG W + A++
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGG-FCNAGRWDDGAKL 320
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/520 (20%), Positives = 215/520 (41%), Gaps = 23/520 (4%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
++ L S+ + + EA+ + KM R +V P + +L +L K +
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWG 228
++F +N ++ K G +E AR LF+ M R D V++N++I + G
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGL 287
+ FE M++ E ++I +N + + G L+ +M+ + + V+ +
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL- 346
+A G ++ + + R G + +LI + G+L A+ L M + G+
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 347 ---ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
+T+ A++ G +R+ E LF +M G PN + +++ + N+ E
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDEVTYTAMIRGYG 459
+K K LLL+ T + K+ AK V + + + + + YT ++ Y
Sbjct: 495 -LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI 519
G L++ +EM + I+ V ++ + LV++ F + +D+G+
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 520 EHYACMADLFGRAGLLNKAKEIITRMPYK---PTPAMWATLIGACRIHGNTVLGEWAAGK 576
+ M D + + A + +M K P + +L+ GN + K
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 577 LLE--MKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNL 614
+ E MK D Y L+ + + C ++L + R+++ +
Sbjct: 674 MAEIGMKLDLLAYTSLV---WGLSHC-NQLQKARSFLEEM 709
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/455 (18%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N++I + A + +M + ++PD TY S++ G++ V + ++
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWG 228
+ +NAL++ + KFGKL + + M + + VS++T++ + G
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGL 287
+A K + M+ G+ N + ++ GN A +L ++M + + + V +
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVR--NALITMYSRCGDLGHAYMLFQRMEEKG 345
+ +K +E+ G G V+ N+ NALI + + ++ A L ++ +G
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAG--VIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 346 ----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN---YVTI-------------- 384
L+ + + G +++++ + +M G + N Y T+
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 385 ------------ASVLPLCARIANLQHGK------EFHCYIMKREQFKEYLLLWNTLVDM 426
+V+ C I L K ++ I + ++ ++D
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 427 YARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPD 482
+ +V A +F+ + ++ D YT+++ G +G AL + ++M + +K D
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 483 HVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
+A +++ SH + + + +EM+ + GI P
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGE-GIHP 716
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 165/402 (41%), Gaps = 54/402 (13%)
Query: 106 SSLEP--LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCAS 163
+ L+P + ++ L+ F + + +A+ Y M R ++P+E+TY S++ A ++ + +
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 164 GVEV-HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDV----SWNTII 218
+ ++ ++VG + W++ + AL+ +++ A LF M + S+N +I
Sbjct: 421 AFRLGNEMLQVG-VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 219 SCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIH 277
+ A +L ++ G++ +++++ T G + A ++++M+ I
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 278 LDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYML 337
+ + ++A G G + +V LI + + A
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 338 FQRME-----EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA 392
F R+ + + AM+ G ++V+ + LF QM+ +G P+
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD------------ 647
Query: 393 RIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDE 448
R A + +L+D + G VLEA + D + + D
Sbjct: 648 RTA------------------------YTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683
Query: 449 VTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVL 490
+ YT+++ G + Q A + EEM I PD V ++VL
Sbjct: 684 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/584 (19%), Positives = 244/584 (41%), Gaps = 70/584 (11%)
Query: 55 INVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWN 114
+ NSL+ K+L+++++++G D + +
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTT-------------------------------Q 237
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVG 174
+L+ +R E EAL + + + PD Y ++AC + LD A + + ++
Sbjct: 238 LLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEK 297
Query: 175 SMGW-SLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWN-----TIISCYASRGTWG 228
+ S + +++ K G ++ A L D M D +S N ++I+ +
Sbjct: 298 KLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLS-DGISMNVVAATSLITGHCKNNDLV 356
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT---SIHLDHVAMVV 285
A LF++M++EG N + ++ + + G + AL+ +M + + HV ++
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416
Query: 286 G--LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE 343
L H ALKL E + F V N +++ + G A L +ME
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGLANVF-----VCNTILSWLCKQGKTDEATELLSKMES 471
Query: 344 KGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQH 399
+G+ +++N ++ G +D +F +L +G +PN T + ++ C R + Q+
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN 531
Query: 400 GKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEV-----TYTAM 454
E + M + +++ T+++ + G+ +A+ + ++ + +Y ++
Sbjct: 532 ALEVVNH-MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSI 590
Query: 455 IRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYG 514
I G+ +GE A+ +EEMC I P+ + +++ + + Q + EM + G
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM-KNKG 649
Query: 515 IIPRIEHYACMADLFGRAGLLNKAKEIITRM---PYKPTPAMWATLIGACRIHGNTVLGE 571
+ I Y + D F + + A + + + P+ ++ +LI R GN V
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709
Query: 572 WAAGKLLE--MKPDHSGYYILI------ANMYAAAGCWSELAEV 607
K+L+ ++ D Y LI N+ A+ ++E+ V
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/495 (20%), Positives = 203/495 (41%), Gaps = 20/495 (4%)
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
LI+ +N V AL + KM ++ P+ T+ +++ + + +E +K +EV
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER---DDVSWNTIISCYASRGTWGEAFK 232
+ S+F + ++ + K K E A LFD E + NTI+S +G EA +
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATE 464
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQ-MRTSIHLDHVAMVVGLNACS 291
L +M+ G+ N++ +N + G+ N A + S + + ++ + ++ C
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRM-EEKGL---- 346
+ E+ H + +V V +I + G A L M EEK L
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 347 ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
+++N+++ GF +D + +M G PN +T S++ + + E
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKG 462
MK + K + + L+D + + + A +F L + Y ++I G+ G
Sbjct: 645 -MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 463 EGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHY 522
AL+++++M K ++ D ++ G + L+ EM G++P Y
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM-QAVGLVPDEIIY 762
Query: 523 ACMADLFGRAGLLNKAKEIITRMPYK---PTPAMWATLIGACRIHGNTVLGEWAAGKLLE 579
+ + + G K ++ M P ++ +I GN ++L+
Sbjct: 763 TVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLD 822
Query: 580 --MKPDHSGYYILIA 592
+ PD + + IL++
Sbjct: 823 KGILPDGATFDILVS 837
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/507 (19%), Positives = 213/507 (42%), Gaps = 58/507 (11%)
Query: 65 QLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEP----LHWNMLISMF 120
+L +++S G N + L++ + + N A ++ + P + +++LI F
Sbjct: 325 RLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWF 384
Query: 121 VRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEV-HKAIEVGSMGWS 179
+N +AL Y+KM + P F ++++ + +++ ++ E G +
Sbjct: 385 RKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA--N 442
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFE 235
+FV N ++S K GK + A L M R + VS+N ++ + + A +F
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIG 294
+ E+G++ N ++ + G + + AL++++ M +S I ++ V +N +G
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 295 ALKLGKEIHGHAVR---------------TGFDVLDNVRNALITMYSRCGD--------- 330
+E+ + + GF + +A+ CG+
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY 622
Query: 331 ------------LGHAYMLFQRMEEKG----LITWNAMLSGFAHMDRVDEVSFLFRQMLH 374
+ A + M+ KG + + A++ GF ++ S LF ++L
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLE 682
Query: 375 EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVL 434
EG P+ S++ + N+ + + ++K + + L + TL+D + G ++
Sbjct: 683 EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK-DGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 435 EAKRVFDSLTR----RDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVL 490
A ++ + DE+ YT ++ G KG+ + +FEEM K + P+ + AV+
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 491 TACSHSGLVAQGQVLFQEMVDDYGIIP 517
G + + L EM+D GI+P
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDK-GILP 827
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 128/271 (47%), Gaps = 17/271 (6%)
Query: 98 ACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGE 157
A ++ E + + +N +I F + A++AY +M + P+ TY S++ +
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK 631
Query: 158 LLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVS 213
+E+ ++ + + + AL+ + K +E A LF + E
Sbjct: 632 NNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI 691
Query: 214 WNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR 273
+N++IS + + G A L+++M ++G+ ++ + T+ G L GN A +L ++M+
Sbjct: 692 YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
Query: 274 -TSIHLDHVAMVVGLNACSHIG----ALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRC 328
+ D + V +N S G +K+ +E+ + V +VL + NA+I + R
Sbjct: 752 AVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP--NVL--IYNAVIAGHYRE 807
Query: 329 GDLGHAYMLFQRMEEKGLI----TWNAMLSG 355
G+L A+ L M +KG++ T++ ++SG
Sbjct: 808 GNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 198/452 (43%), Gaps = 38/452 (8%)
Query: 129 ALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVS 188
ALS R M + +P+ Y +++ + + +++ + + + N ++
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 189 MYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM 244
KF ++ A + + M R DD+++ +++ G A LF R+ +
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP---- 351
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHG 304
I+I+NT+ G++ G A +LS M TS + V V N+ + G K G
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI--VPDVCTYNSLIY-GYWKEG----- 403
Query: 305 HAVRTGFDVLDNVRNA-----------LITMYSRCGDLGHAYMLFQRMEEKGL----ITW 349
V +VL ++RN L+ + + G + AY + M GL + +
Sbjct: 404 -LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
N ++S F R+ E +FR+M +G +P+ T S++ + ++H + M
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL-WLLRDMI 521
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQ 465
E + +NTL++ + R G++ EA+++ + + + DE+TY ++I+G GE
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 466 MALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACM 525
A ++FE+M + P +++ ++ SG+V + V FQ+ + G P I + +
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA-VEFQKEMVLRGSTPDIVTFNSL 640
Query: 526 ADLFGRAGLLNKAKEIITRMPYKPTPAMWATL 557
+ RAG + + ++ + P T
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 166/405 (40%), Gaps = 22/405 (5%)
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASG-VEVHKAIEVGSMGWSLFVHNAL 186
EA +ML + PD+ TY ++ C G V+ K + + + N L
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGL-----CKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 187 VSMYAKFGKLEVARHLFDNMPER-----DDVSWNTIISCYASRGTWGEAFKLFERMQEEG 241
+ + G+L+ A+ + +M D ++N++I Y G G A ++ M+ +G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 242 VEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGK 300
+ N+ + + G+ G A +L++M + + V ++A +
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI----TWNAMLSGF 356
EI R G N+LI+ ++ HA L + M +G++ T+N +++ F
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
+ E L +M+ +G+ + +T S++ R + + M R+
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF-EKMLRDGHAPS 598
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFE 472
+ N L++ RSG V EA + R D VT+ ++I G G + L +F
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
++ I PD V +++ G V +L E ++D G +P
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED-GFVP 702
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 10/289 (3%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N LI + + L AL M K P+ ++Y ++ +L V +
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWG 228
+ + N L+S + K ++ A +F MP + D ++N++IS
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGL 287
A L M EGV N + +NT+ +L G K A KL+++M LD + +
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG-- 345
G + + + +R G + N LI R G + A + M +G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 346 --LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP-LC 391
++T+N++++G R+++ +FR++ EG P+ VT +++ LC
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 44/318 (13%)
Query: 85 LVSFYARFNLFDDACIVTE--SSSSLEP--LHWNMLISMFVRNELFVEALSAYRKMLRKQ 140
LV + + D+A V S+ L+P + +N LIS F + EA+ +R+M RK
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 141 VIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVAR 200
PD +T+ S++ E+ E+ A+ W L R
Sbjct: 490 CKPDVYTFNSLISGLCEV------DEIKHAL------WLL-------------------R 518
Query: 201 HLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAG 260
+ + V++NT+I+ + RG EA KL M +G ++ I +N++ G AG
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 261 NFKGALKLLSQMRTSIHL-DHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRN 319
A L +M H +++ + +N G ++ E V G N
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 320 ALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHE 375
+LI R G + +F++++ +G+ +T+N ++S V + L + + +
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Query: 376 GAEPNYVT----IASVLP 389
G PN+ T + S++P
Sbjct: 699 GFVPNHRTWSILLQSIIP 716
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 125/558 (22%), Positives = 225/558 (40%), Gaps = 68/558 (12%)
Query: 84 RLVSFYARFNLFDDACIVTESSSSLEPLH----WNMLISMFVRNELFVEALSAYRKMLRK 139
+L+S A+ N F+ + E +L H +++ I+ F R AL+ KM++
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 140 QVIPDEFTYPSVLKA-CGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEV 198
PD T S+L C + V + +E+G F L+ K
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASE 206
Query: 199 ARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAG 254
A L D M +R D V++ T+++ RG A L ++M++ +E +++I+NT+
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 255 GYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC-SHIGALKLGKEIHGHAVRTGFDV 313
G + AL L ++M V L +C + G + + +
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 314 LDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHMDRVDEVSFLF 369
+ALI + + G L A L+ M ++ + T++++++GF DR+DE +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 370 RQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYAR 429
M+ + PN VT ++TL+ + +
Sbjct: 387 ELMISKDCFPNVVT------------------------------------YSTLIKGFCK 410
Query: 430 SGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA 485
+ +V E +F +++R + VTYT +I G+ + A +F++M + P+ +
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 486 MVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
+L +G +A+ V+F E + + P I Y M + +AG + E+ +
Sbjct: 471 YNILLDGLCKNGKLAKAMVVF-EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 546 PYK---PTPAMWATLI-GACRIHGNTVLGEWAAGKLLEMKPD----HSGYYILIANMYAA 597
K P + T+I G CR E A L +MK D +SG Y +
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSK----EEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 598 AGCWSELAEVRTYMRNLG 615
G AE+ MR+ G
Sbjct: 586 DGDREASAELIKEMRSCG 603
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 223/495 (45%), Gaps = 53/495 (10%)
Query: 111 LHWNMLISMFVRNELFVEALSAY-------------RKMLRKQVIPDEFTYPSVLKACGE 157
LH N+ +S LF ALSAY +KM+R ++ P+ T ++L
Sbjct: 119 LHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG--- 175
Query: 158 LLDCASGVEVHKAIEV----GSMGWSLFVH--NALVSMYAKFGKLEVARHLFDNMPER-- 209
L+ S + A EV +G SL V N LV+ Y GKLE A + + M
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235
Query: 210 ---DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGAL 266
D+V++NTI+ + +G + +L M++ G+ N + +N + GY G+ K A
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 267 KLLSQMR-TSIHLDHVAMVVGLNACSHIGALKLGKEIHG--HAVRTGFDVLDNVRNALIT 323
+++ M+ T++ D + +N + G+++ G E+ +++ DV+ N LI
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVV--TYNTLI- 352
Query: 324 MYSRCGDLG---HAYMLFQRMEEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLH-E 375
C +LG A L ++ME G+ +T N L ++ + V+ ++++
Sbjct: 353 --DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 376 GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLE 435
G P+ VT +++ ++ +L E M ++ K + NT++D + K+ E
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEM-MREMGQKGIKMNTITLNTILDALCKERKLDE 469
Query: 436 AKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLT 491
A + +S +R DEVTY +I G+ + + + AL +++EM K KI P +++
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 492 ACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIIT---RMPYK 548
H G F E+ + G++P + + + + G + KA E + +K
Sbjct: 530 GLCHHGKTELAMEKFDELAES-GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588
Query: 549 PTPAMWATLI-GACR 562
P L+ G C+
Sbjct: 589 PDNYTCNILLNGLCK 603
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/513 (18%), Positives = 207/513 (40%), Gaps = 54/513 (10%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDAC-----IVTESSSSLEPLHW 113
S+S +++ ++ +G N LV+ Y +DA +V+E + + + +
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N ++ + + M + ++P+ TY +++ +L ++ + ++
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGE 229
++ L +N L++ G + L D M + D V++NT+I G E
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 230 AFKLFERMQEEGVEMN------------------------------------IIIWNTMA 253
A KL E+M+ +GV+ N I+ ++T+
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 254 GGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFD 312
YL G+ GAL+++ +M + I ++ + + L+A L + A + GF
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 313 VLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI----TWNAMLSGFAHMDRVDEVSFL 368
V + LI + R + A ++ M++ + T+N+++ G H + +
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 369 FRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYA 428
F ++ G P+ T S++ + ++ EF+ +K FK N L++
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH-SFKPDNYTCNILLNGLC 602
Query: 429 RSGKVLEAKRVFDSLTRR---DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA 485
+ G +A F++L D VTY MI + + + A ++ EM + ++PD
Sbjct: 603 KEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662
Query: 486 MVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPR 518
+ ++ G +++ L ++ +G + R
Sbjct: 663 YNSFISLLMEDGKLSETDELLKKFSGKFGSMKR 695
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 26/320 (8%)
Query: 354 SGFAHMDRVDEVSF---------LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFH 404
SG + +D +D + + + +EG + + + LC LQ K H
Sbjct: 145 SGHSSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVH 204
Query: 405 CYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEG 464
+I + + +N++++MY+ G V +A VF+S+ R+ T+ +IR + G+G
Sbjct: 205 EFITSSVGISD-ISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQG 263
Query: 465 QMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYAC 524
+ A++ F + KPD + AC G + +G + F+ M +YGIIP +EHY
Sbjct: 264 EDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVS 323
Query: 525 MADLFGRAGLLNKAKEIITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDH 584
+ + G L++A + M +P +W TL+ R+HG+ +LG+ + ++
Sbjct: 324 LVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASR 381
Query: 585 SGYYILIANMYAAAGCWSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHA 644
N + AG + + + K P + G + GD S P
Sbjct: 382 -------LNKESKAGLVPVKSSDLVKEKLQRMAKGP-----NYGIRY--MAAGDISRPEN 427
Query: 645 GEIYPLMDGLNELMKDAGYI 664
E+Y + L E M + GY+
Sbjct: 428 RELYMALKSLKEHMIEIGYV 447
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 151 VLKACGELLDCASGVEVHKAIEVGSMGWS-LFVHNALVSMYAKFGKLEVARHLFDNMPER 209
+ + CG+ VH+ I S+G S + +N+++ MY+ G +E A +F++MPER
Sbjct: 187 IAQLCGDAQALQEAKVVHEFI-TSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPER 245
Query: 210 DDVSWNTIISCYASRGTWGEAFKLFERMQEEG 241
+ +W +I C+A G +A F R ++EG
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 17/193 (8%)
Query: 260 GNFKGALKLLSQMRTS---IHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLD- 315
G K A++++ R + L + + L C AL+ K +H + + + D
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQL--CGDAQALQEAKVVH-EFITSSVGISDI 216
Query: 316 NVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHE 375
+ N++I MYS CG + A +F M E+ L TW ++ FA + ++ F + E
Sbjct: 217 SAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQE 276
Query: 376 GAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL-----WNTLVDMYARS 430
G +P+ + C + ++ G + +KEY ++ + +LV M A
Sbjct: 277 GNKPDGEMFKEIFFACGVLGDMNEG-----LLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 431 GKVLEAKRVFDSL 443
G + EA R +S+
Sbjct: 332 GYLDEALRFVESM 344
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 52/351 (14%)
Query: 195 KLEVARHLF----DNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWN 250
++EVA L D P + V++ T+I+ + RG AF LF+ M++ G+E ++I ++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 251 TMAGGYLHAGNFKGALKLLSQ-MRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRT 309
T+ GY AG KL SQ + + LD V
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV---------------------------- 357
Query: 310 GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHMDRVDEV 365
V ++ I +Y + GDL A ++++RM +G+ +T+ ++ G R+ E
Sbjct: 358 -------VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 366 SFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY-IMKREQFKEYLLLWNTLV 424
++ Q+L G EP+ VT +S++ + NL+ G F Y M + + ++++ LV
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG--FALYEDMIKMGYPPDVVIYGVLV 468
Query: 425 DMYARSGKVLEAKR----VFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIK 480
D ++ G +L A R + R + V + ++I G+ AL +F M + IK
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 481 PDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGR 531
PD V+ G + + LF M G+ P Y + D F +
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMF-KMGLEPDALAYCTLIDAFCK 578
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/481 (20%), Positives = 209/481 (43%), Gaps = 31/481 (6%)
Query: 60 LSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTES--SSSLEP--LHWNM 115
L G +L +Q + G + ++ + Y + A +V + + P + + +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKA---CGELLDCASGVEVHKAIE 172
LI ++ EA Y ++L++ + P TY S++ CG L SG +++ +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL---RSGFALYE--D 451
Query: 173 VGSMGW--SLFVHNALVSMYAKFG----KLEVARHLFDNMPERDDVSWNTIISCYASRGT 226
+ MG+ + ++ LV +K G + + + + V +N++I +
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 227 WGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVV 285
+ EA K+F M G++ ++ + T+ + G + AL L +M + + D +A
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571
Query: 286 GLNA-CSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRM--- 341
++A C H+ +G ++ R V N +I + +C + A F +
Sbjct: 572 LIDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 342 -EEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHG 400
E ++T+N M+ G+ + R+DE +F + PN VT+ ++ + + N G
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK-NNDMDG 689
Query: 401 KEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIR 456
IM + K + + L+D +++S + + ++F+ + + V+Y+ +I
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 457 GYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGII 516
G +G A NIF + K+ PD VA ++ G + + +L++ M+ + G+
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN-GVK 808
Query: 517 P 517
P
Sbjct: 809 P 809
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 131/305 (42%), Gaps = 28/305 (9%)
Query: 311 FDVLDNVRNA---------LITMYSRCGDLGHAYMLFQRMEEKGLI----TWNAMLSGFA 357
F+VL ++R+ L+ R G + A +F + G++ + ML+
Sbjct: 133 FNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI 192
Query: 358 HMDRVDEVSFLFRQMLHEGAEPNYVTI-ASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
DRVD ++ F ++ G EP+ V+ VL + +FH +M+R F+
Sbjct: 193 GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER-GFRVG 251
Query: 417 LLLWNTL-----VDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIF 471
++ N + VD + ++L V D + VT+ +I G+ +GE A ++F
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSL--VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 472 EEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGR 531
+ M + I+PD +A ++ +G++ G LF + + G+ + ++ D++ +
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVK 368
Query: 532 AGLLNKAKEIITRMPYK---PTPAMWATLIGACRIHGNTVLGEWAAGKLLE--MKPDHSG 586
+G L A + RM + P + LI G G++L+ M+P
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 587 YYILI 591
Y LI
Sbjct: 429 YSSLI 433
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 168/399 (42%), Gaps = 61/399 (15%)
Query: 167 VHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYA 222
V+K + + ++F N +++ K GK+ AR + ++M + VS+NT+I Y
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 223 SRGTWGEAFK---LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLD 279
G G+ +K + + M E V N+ +N + G+ N G++K+ +M LD
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM-----LD 324
Query: 280 HVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNV--RNALITMYSRCGDLGHAYML 337
DV NV N+LI G + A +
Sbjct: 325 Q-------------------------------DVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 338 FQRMEEKG----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCAR 393
+M G LIT+NA+++GF D + E +F + +GA P ++ +
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 394 IANLQHGKEFHCYIMKREQFKEYLL----LWNTLVDMYARSGKVLEAKRVFDSLTRR--- 446
+ + G + +K E +E ++ +N L+ R+G + AK++FD LT +
Sbjct: 414 LGKIDDG-----FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP 468
Query: 447 DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLF 506
D VT+ ++ GY KGE + A + +EM K +KP H+ V+ G + +
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMR 528
Query: 507 QEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
+M + + + Y + + + G L A ++ M
Sbjct: 529 TQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 179/410 (43%), Gaps = 46/410 (11%)
Query: 133 YRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAK 192
Y++M+R+++ P+ FT+ V+ A + +V + ++V ++ +N L+ Y K
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 193 FG---KLEVARHLFDNMPERDDVSWNTIISCYASRGTWGE-----AFKLFERMQEEGVEM 244
G K+ A + M E +DVS N G W + + K+F+ M ++ V+
Sbjct: 271 LGGNGKMYKADAVLKEMVE-NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLGKEIH 303
N+I +N++ G + G A+ + +M ++ + + + +N LK ++
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI----TWNAMLSGFAHM 359
G G + N LI Y + G + + L + ME +G++ T+N +++G
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYL-- 417
++ LF Q+ +G P+ VT ++ R G+ ++ +E K L
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR-----KGESRKAAMLLKEMSKMGLKP 503
Query: 418 --LLWNTLVDMYARSGKVLEAKRVFDSLT-----RRDEVTYTAMIRGYGMKGEGQMALNI 470
L +N ++ Y + G + A + + R + +Y +++GY KG+ + A +
Sbjct: 504 RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIE 520
EM + + P+ + +++ +EMVD G +P IE
Sbjct: 564 LNEMLEKGLVPNRITY----------------EIVKEEMVDQ-GFVPDIE 596
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 161/427 (37%), Gaps = 67/427 (15%)
Query: 210 DDVSWNTIIS-----CYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKG 264
D+V N+II+ YA+ + F+ F+R G +++ + + L
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 265 ALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALIT 323
+ +M R I + V +NA G + +++ G N LI
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 324 MYSRCGDLGHAYM---LFQRMEEK----GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG 376
Y + G G Y + + M E L T+N ++ GF D + +F++ML +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 377 AEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEA 436
+PN ++ +N+L++ GK+ EA
Sbjct: 327 VKPNVIS------------------------------------YNSLINGLCNGGKISEA 350
Query: 437 KRVFDSLT----RRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTA 492
+ D + + + +TY A+I G+ + AL++F + P ++ A
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 493 CSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPA 552
G + G L +EM + GI+P + Y C+ R G + AK++ ++ K P
Sbjct: 411 YCKLGKIDDGFALKEEM-EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPD 469
Query: 553 MWATLI---GACRIHGNTVLGEWAAGKLLEM-----KPDHSGYYILIANMYAAAGCWSEL 604
+ I G CR G + AA L EM KP H Y I++ Y G
Sbjct: 470 LVTFHILMEGYCR-KGES---RKAAMLLKEMSKMGLKPRHLTYNIVMKG-YCKEGNLKAA 524
Query: 605 AEVRTYM 611
+RT M
Sbjct: 525 TNMRTQM 531
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/566 (21%), Positives = 228/566 (40%), Gaps = 72/566 (12%)
Query: 85 LVSFYARFNLFDDAC---IVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQV 141
L++ R N F C V S + + I+ F + EA+ + KM V
Sbjct: 232 LLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV 291
Query: 142 IPDEFTYPSVLKACGELLDCASGVEV----HKAIEVGSMGWSLFVHNALVSMYAKFGKLE 197
P+ T+ +V+ G C E K +E G M +L ++ LV + ++
Sbjct: 292 APNVVTFNTVIDGLGM---CGRYDEAFMFKEKMVERG-MEPTLITYSILVKGLTRAKRIG 347
Query: 198 VARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMA 253
A + M ++ + + +N +I + G+ +A ++ + M +G+ + +NT+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 254 GGYLHAGNFKGALKLLSQMRT---SIHLDHVAMVVGLNACSHI----------------- 293
GY G A +LL +M + +++ V+ L CSH+
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL-LCSHLMFDSALRFVGEMLLRNM 466
Query: 294 ------------GALKLGK-----EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYM 336
G K GK E+ + GF V NAL+ G L A+
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 337 LFQRMEEKGLI----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA 392
+ + + +G + ++N ++SG ++DE +M+ G +P+ T + ++
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 393 RIANLQHGKEF--HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD--- 447
+ ++ +F C KR + ++ ++D ++ + E + FD + ++
Sbjct: 587 NMNKVEEAIQFWDDC---KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 448 -EVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLF 506
V Y +IR Y G MAL + E+M I P+ +++ S V + ++LF
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 507 QEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYK---PTPAMWATLIGACRI 563
+EM + G+ P + HY + D +G+ G + K + ++ M K P + +IG
Sbjct: 704 EEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 564 HGNTVLGEWAAGKLLE--MKPDHSGY 587
GN ++ E + PD Y
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITY 788
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 135/335 (40%), Gaps = 54/335 (16%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQE 239
NAL+ + GKL+ A + + R D VS+NT+IS + EAF + M +
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKL 298
G++ + ++ + G + + A++ R + D V ++ C +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 299 GKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLS 354
G+E + V N LI Y R G L A L + M+ KG+ T+ +++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
G + + RV+E LF +M EG EPN FH
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNV---------------------FH---------- 717
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD----EVTYTAMIRGYGMKGEGQMALNI 470
+ L+D Y + G++++ + + + ++ ++TYT MI GY G A +
Sbjct: 718 -----YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVL 505
EM + I PD + + G + QG VL
Sbjct: 773 LNEMREKGIVPDSITYKEFIY-----GYLKQGGVL 802
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 105 SSSLEP--LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCA 162
S +++P + +N LI + R+ AL M K + P+ TY S++K +
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 163 SGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERD----DVSWNTII 218
+ + + + + ++F + AL+ Y K G++ L M ++ +++ +I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 219 SCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGN----FKGA 265
YA G EA +L M+E+G+ + I + GYL G FKG+
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 808
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/566 (21%), Positives = 228/566 (40%), Gaps = 72/566 (12%)
Query: 85 LVSFYARFNLFDDAC---IVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQV 141
L++ R N F C V S + + I+ F + EA+ + KM V
Sbjct: 232 LLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV 291
Query: 142 IPDEFTYPSVLKACGELLDCASGVEV----HKAIEVGSMGWSLFVHNALVSMYAKFGKLE 197
P+ T+ +V+ G C E K +E G M +L ++ LV + ++
Sbjct: 292 APNVVTFNTVIDGLGM---CGRYDEAFMFKEKMVERG-MEPTLITYSILVKGLTRAKRIG 347
Query: 198 VARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMA 253
A + M ++ + + +N +I + G+ +A ++ + M +G+ + +NT+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 254 GGYLHAGNFKGALKLLSQMRT---SIHLDHVAMVVGLNACSHI----------------- 293
GY G A +LL +M + +++ V+ L CSH+
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL-LCSHLMFDSALRFVGEMLLRNM 466
Query: 294 ------------GALKLGK-----EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYM 336
G K GK E+ + GF V NAL+ G L A+
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 337 LFQRMEEKGLI----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA 392
+ + + +G + ++N ++SG ++DE +M+ G +P+ T + ++
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 393 RIANLQHGKEF--HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD--- 447
+ ++ +F C KR + ++ ++D ++ + E + FD + ++
Sbjct: 587 NMNKVEEAIQFWDDC---KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 448 -EVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLF 506
V Y +IR Y G MAL + E+M I P+ +++ S V + ++LF
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 507 QEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYK---PTPAMWATLIGACRI 563
+EM + G+ P + HY + D +G+ G + K + ++ M K P + +IG
Sbjct: 704 EEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 564 HGNTVLGEWAAGKLLE--MKPDHSGY 587
GN ++ E + PD Y
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITY 788
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 135/335 (40%), Gaps = 54/335 (16%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQE 239
NAL+ + GKL+ A + + R D VS+NT+IS + EAF + M +
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKL 298
G++ + ++ + G + + A++ R + D V ++ C +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 299 GKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLS 354
G+E + V N LI Y R G L A L + M+ KG+ T+ +++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
G + + RV+E LF +M EG EPN FH
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNV---------------------FH---------- 717
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD----EVTYTAMIRGYGMKGEGQMALNI 470
+ L+D Y + G++++ + + + ++ ++TYT MI GY G A +
Sbjct: 718 -----YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVL 505
EM + I PD + + G + QG VL
Sbjct: 773 LNEMREKGIVPDSITYKEFIY-----GYLKQGGVL 802
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 105 SSSLEP--LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCA 162
S +++P + +N LI + R+ AL M K + P+ TY S++K +
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 163 SGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERD----DVSWNTII 218
+ + + + + ++F + AL+ Y K G++ L M ++ +++ +I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 219 SCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGN----FKGA 265
YA G EA +L M+E+G+ + I + GYL G FKG+
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 808
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 177/421 (42%), Gaps = 28/421 (6%)
Query: 215 NTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-R 273
N ++ +A ++E M E G+ +I +NTM AG+ + K+ +M R
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 274 TSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGH 333
+I V + +N S G ++ + HG R+GF V N LI Y + G
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 334 AYMLFQRMEEKGLI----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP 389
A+ + M G+ T+N + R+D+ R++L A P+ V+ +++
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMH 382
Query: 390 LCARIANLQHGKEFHCYI----MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTR 445
++ GK + ++ ++ +NTL+D SG + A+R+ + +T
Sbjct: 383 -----GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 446 R----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQ 501
+ D +TYT +++G+ G MA +++EM + IKPD A G +
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 502 GQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI---ITRMPYKPTPAMWATLI 558
L +EMV P + Y D + G L KA E I R+ P + T+I
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 559 GACRIHGNTVLGEWAAGKLLEMK--PDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGV 616
+G + ++L + P Y++LI +A AG + + T M+ GV
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG-HAKAGRLEQAFQYSTEMKKRGV 616
Query: 617 K 617
+
Sbjct: 617 R 617
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 174/422 (41%), Gaps = 45/422 (10%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRK--QVIPDEFTYPSVLKACGE-LLDCASGVEVHK 169
+N+LI+ F +N EA + M R V P F P + C + L D A GV +
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN-PLIEGYCKQGLFDDAWGV-TDE 333
Query: 170 AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGE 229
+ G + + +N + FG+++ AR L +M D VS+NT++ Y G + E
Sbjct: 334 MLNAG-IYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVE 392
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLN 288
A LF+ ++ + +I+ +NT+ G +GN +GA +L +M T I D + +
Sbjct: 393 ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRM-----EE 343
G L + E++ +R G R GD A+ L + M
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA 512
Query: 344 KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
L +N + G + + + R++ G P++VT +V+ L++G+
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR-----GYLENGQ-- 565
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGE 463
+ M R + E L KR++ S+ +TY +I G+ G
Sbjct: 566 --FKMARNLYDEML------------------RKRLYPSV-----ITYFVLIYGHAKAGR 600
Query: 464 GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA 523
+ A EM K ++P+ + A+L +G + + +M ++ GI P Y
Sbjct: 601 LEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM-EEEGIPPNKYSYT 659
Query: 524 CM 525
+
Sbjct: 660 ML 661
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/486 (19%), Positives = 201/486 (41%), Gaps = 63/486 (12%)
Query: 119 MFVRNELFVEALSAYRKMLRK-----------------------------------QVIP 143
++ + + + L ++ KM+RK ++P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 144 DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLF 203
T+ ++L +C + D ++ ++ ++ +S +N L++ ++K GK+E AR
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 204 DNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHA 259
+M S+N +I Y +G + +A+ + + M G+ +N
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 260 GNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHG----HAVRTGFDVLD 315
G A +LLS M VV N H G +K+GK + +R G D+
Sbjct: 357 GRIDDARELLSSM-------AAPDVVSYNTLMH-GYIKMGKFVEASLLFDDLRAG-DIHP 407
Query: 316 NV--RNALITMYSRCGDLGHAYMLFQRMEEK----GLITWNAMLSGFAHMDRVDEVSFLF 369
++ N LI G+L A L + M + +IT+ ++ GF + + ++
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 370 RQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYAR 429
+ML +G +P+ + R+ + H ++ + L ++N +D +
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 430 SGKVLEA----KRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVA 485
G +++A +++F D VTYT +IRGY G+ +MA N+++EM + ++ P +
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 486 MVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
++ + +G + Q EM G+ P + + + +AG +++A + +M
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646
Query: 546 PYKPTP 551
+ P
Sbjct: 647 EEEGIP 652
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 148/364 (40%), Gaps = 24/364 (6%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLIS 118
+ ++ H + GF L+ Y + LFDDA VT+ E L+ + +
Sbjct: 288 KMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTD-----EMLNAGIYPT 342
Query: 119 MFVRNELFVEALSAY------RKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
N +++ AL + R++L PD +Y +++ ++ + +
Sbjct: 343 TSTYN-IYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWG 228
G + S+ +N L+ + G LE A+ L + M + D +++ T++ + G
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIH--LDHVAMVVG 286
A ++++ M +G++ + + T A G L G+ A +L +M + H D V
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVR-NALITMYSRCGDLGHAYMLFQRMEEKG 345
++ +G L E R G V D+V +I Y G A L+ M K
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGL-VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 346 L----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGK 401
L IT+ ++ G A R+++ +M G PN +T ++L + N+
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 402 EFHC 405
+ C
Sbjct: 641 RYLC 644
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 47/281 (16%)
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELL--DCASGVEVH 168
+ + L+ FV+N A Y +MLRK + PD + Y + +A GEL D +H
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT--RAVGELRLGDSDKAFRLH 502
Query: 169 KA-IEVGSMGWSLFVHNALVSMYAKFGKL----EVARHLFDNMPERDDVSWNTIISCYAS 223
+ + L ++N + K G L E R +F D V++ T+I Y
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Query: 224 RGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAM 283
G + A L++ M + + ++I + + G+ AG + A + ++M+
Sbjct: 563 NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR-------- 614
Query: 284 VVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE 343
V N +H NAL+ + G++ AY +MEE
Sbjct: 615 GVRPNVMTH--------------------------NALLYGMCKAGNIDEAYRYLCKMEE 648
Query: 344 KGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN 380
+G+ ++ ++S ++ +EV L+++ML + EP+
Sbjct: 649 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 122/299 (40%), Gaps = 10/299 (3%)
Query: 92 FNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSV 151
F DDA + S ++ + + +N L+ +++ FVEA + + + P TY ++
Sbjct: 356 FGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 152 LKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER-- 209
+ E + + + + + + + LV + K G L +A ++D M +
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Query: 210 --DDVSWNTIISCYASRGTWGEAFKLFERM-QEEGVEMNIIIWNTMAGGYLHAGNFKGAL 266
D ++ T G +AF+L E M + ++ I+N G GN A+
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 267 KLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMY 325
+ ++ R + DHV + G K+ + ++ +R LI +
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 326 SRCGDLGHAYMLFQRMEEKG----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN 380
++ G L A+ M+++G ++T NA+L G +DE +M EG PN
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 122/244 (50%), Gaps = 16/244 (6%)
Query: 421 NTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIK 480
N +++MY+ V +A +VF+ + + T M+R + G G+ A+++F + K
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 481 PDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKE 540
P+ V + C+ +G V +G + FQ M +YGI+P +EHY + + +G L++A
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 541 IITRMPYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMKPDHSGYYILIANMYAAAGC 600
+ RMP +P+ +W TL+ R+HG+ LG+ A +L+E K D + + ++AG
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELGDRCA-ELVE-KLDATRL-----DKVSSAGL 330
Query: 601 WSELAEVRTYMRNLGVKKAPGCAWVDVGGEFSPFFVGDTSNPHAGEIYPLMDGLNELMKD 660
V T + VKK P +S F D+S+P IY + L +K+
Sbjct: 331 ------VATKASDF-VKKEPSTRSEPYF--YSTFRPVDSSHPQMNIIYETLMSLRSQLKE 381
Query: 661 AGYI 664
GY+
Sbjct: 382 MGYV 385
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 11/183 (6%)
Query: 260 GNFKGALKLLSQMRTSIHLDHVAMVVGL-NACSHIGALKLGKEIHGHAVRTGFDVLDNVR 318
GN++ A+++L + + + ++GL C AL+ + +H + R
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 319 NALITMYSRCGDLGHAYMLFQRMEEKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAE 378
NA+I MYS C + A +F+ M E T M+ F + +E LF + EG +
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 379 PNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL-----WNTLVDMYARSGKV 433
PN V C +++ G + + ++EY ++ ++++ M A SG +
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGS-----LQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 434 LEA 436
EA
Sbjct: 273 DEA 275
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/502 (20%), Positives = 207/502 (41%), Gaps = 53/502 (10%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIV----TESSSSL 108
C L K+ A++ S G++ T+ L+ + + ++ +A V E+S
Sbjct: 290 ACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA 349
Query: 109 EPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVH 168
+ + +N L++ +VR EA M +K V+P+ TY +V+ A G+ +++
Sbjct: 350 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
Query: 169 KAIEVGSMGWSLFVHNALVSMYAKFGKL-EVARHLFD---NMPERDDVSWNTIISCYASR 224
+++ + +NA++S+ K + E+ + L D N + +WNT+++ ++
Sbjct: 410 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
Query: 225 GTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAM 283
G ++F M+ G E + +NT+ Y G+ A K+ +M R +
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 284 VVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGD-LG---------- 332
LNA + G + G+ + GF + + ++ Y++ G+ LG
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 589
Query: 333 ---------------------------HAYMLFQRMEEK-GLITWNAMLSGFAHMDRVDE 364
A+ LF++ K ++ +N+MLS F + D+
Sbjct: 590 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ 649
Query: 365 VSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLV 424
+ + +G P+ VT S++ + R +E +++ Q K L+ +NT++
Sbjct: 650 AEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI-LKTLEKSQLKPDLVSYNTVI 708
Query: 425 DMYARSGKVLEAKRVFDSLTRRDE----VTYTAMIRGYGMKGEGQMALNIFEEMCKFKIK 480
+ R G + EA R+ +T R TY + GY G ++ E M K +
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Query: 481 PDHVAMVAVLTACSHSGLVAQG 502
P+ + V+ +G ++
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEA 790
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 118/565 (20%), Positives = 224/565 (39%), Gaps = 92/565 (16%)
Query: 89 YARFNLFDDACIVTESSSSLEP----LHWNMLISMFVR-NELFVEALSAYRKMLRKQVIP 143
Y+R ++ A + E + P + +N+++ +F + + + L +M K +
Sbjct: 220 YSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF 279
Query: 144 DEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFG----KLEVA 199
DEFT +VL AC E ++ +NAL+ ++ K G L V
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 200 RHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHA 259
+ + +N D V++N +++ Y G EA + E M ++GV N I + T+ Y A
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 260 GNFKGALKLLSQM--------------------RTSIHLDHVAMVVGLNA---------- 289
G ALKL M + S + + M+ + +
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 290 ------CSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE 343
C + G K + GF+ + N LI+ Y RCG A ++ M
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 344 KG----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCA------- 392
G + T+NA+L+ A + M +G +P + + +L A
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG 579
Query: 393 --RIAN-LQHGKEFHCYIM------------------------KREQFKEYLLLWNTLVD 425
RI N ++ G+ F +++ K+ +K ++++N+++
Sbjct: 580 IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLS 639
Query: 426 MYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
++ R+ +A+ + +S+ D VTY +++ Y +GE A I + + K ++KP
Sbjct: 640 IFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP 699
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
D V+ V+ GL+ + + EM + GI P I Y + G+ + +++
Sbjct: 700 DLVSYNTVIKGFCRRGLMQEAVRMLSEMT-ERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 542 ITRMPY---KPTPAMWATLI-GACR 562
I M +P + ++ G CR
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCR 783
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 165/402 (41%), Gaps = 20/402 (4%)
Query: 186 LVSMYAKFGKLEVARHLFDNMPERD---DV-SWNTIISCYASRGTWGEAFKLFERMQEEG 241
V + + + VA L D +P ++ DV ++ TI+ Y+ G + +A LFERM+E G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 242 VEMNIIIWNTMAGGYLHAG-NFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIGALKLG 299
++ +N + + G +++ L +L +MR+ + D L+AC+ G L+
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA 300
Query: 300 KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSG 355
KE G++ NAL+ ++ + G A + + MEE +T+N +++
Sbjct: 301 KEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAA 360
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKE 415
+ E + + M +G PN +T +V+ + + Y MK
Sbjct: 361 YVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF-YSMKEAGCVP 419
Query: 416 YLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIF 471
+N ++ + + + E ++ + + T+ M+ G KG + +F
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 472 EEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGR 531
EM +PD +++A G ++ EM G + Y + + R
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMT-RAGFNACVTTYNALLNALAR 538
Query: 532 AGLLNKAKEIITRMP---YKPTPAMWATLIGACRIHGNTVLG 570
G + +I+ M +KPT ++ ++ C G LG
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLML-QCYAKGGNYLG 579
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 196/454 (43%), Gaps = 27/454 (5%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
++ LI+ F + +F ALS +KM + +V D Y ++++ L D + + + ++
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWG 228
+ L +N+++++Y K AR L M E + VS++T++S Y +
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLN 288
EA +F M+E +++ N M Y K A +L +R +D VV N
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR---KMDIEPNVVSYN 369
Query: 289 ACSHI-GALKL-GKEIHGHAVRTGFDVLDNV--RNALITMYSRCGDLGHAYMLFQRMEEK 344
+ G +L G+ IH + D+ NV N +I +Y + + A L Q M+ +
Sbjct: 370 TILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 429
Query: 345 GL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHG 400
G+ IT++ ++S + ++D + LF+++ G E + V +++ R+ + H
Sbjct: 430 GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA 489
Query: 401 KE-FHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEA----KRVFDSLTRRDEVTYTAMI 455
K H + +E T + + A++G+ EA ++ F+S +D + MI
Sbjct: 490 KRLLHELKLPDNIPRE------TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMI 543
Query: 456 RGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGI 515
Y + +FE+M PD + VL A + +++EM ++ +
Sbjct: 544 NLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCV 603
Query: 516 IPRIEHYACMADLFGRAGLLNKAKEIITRMPYKP 549
P H+ M L+ + + R+ P
Sbjct: 604 FPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDP 636
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 162/347 (46%), Gaps = 20/347 (5%)
Query: 179 SLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLF 234
S+F +N ++ + + ++A LFD M +R D +++T+I+ + G + A
Sbjct: 154 SVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 213
Query: 235 ERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHI 293
++M+++ V ++++++ + ++ A+ + S++ R+ I D VA +N
Sbjct: 214 QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKA 273
Query: 294 GALKLGKEIHGHAVRTGFDVLDNV--RNALITMYSRCGDLGHAYMLFQRMEEKG----LI 347
+ + + G VL N + L+++Y A +F M+E L
Sbjct: 274 KLFREARLLIKEMNEAG--VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY- 406
T N M+ + +D V E LF + EPN V+ ++L + A L G+ H +
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE-AEL-FGEAIHLFR 389
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKG 462
+M+R+ ++ ++ +NT++ +Y ++ + +A + + R + +TY+ +I +G G
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 463 EGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
+ A +F+++ ++ D V ++ A GL+ + L E+
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 127/311 (40%), Gaps = 42/311 (13%)
Query: 108 LEP--LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGV 165
+EP + +N ++ ++ ELF EA+ +R M RK + + TY +++K G+ ++
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 166 EVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCY 221
+ + ++ + + ++ ++S++ K GKL+ A LF + E D V + T+I Y
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 222 ASRGTWGEAFKLFERMQ-------------------------------EEGVEMNIIIWN 250
G G A +L ++ E G +I ++
Sbjct: 481 ERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFG 540
Query: 251 TMAGGYLHAGNFKGALKLLSQMRTSIHL-DHVAMVVGLNACSHIGALKLGKEIHGHAVRT 309
M Y + +++ +MRT+ + D + + LNA + ++
Sbjct: 541 CMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE 600
Query: 310 GFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLITWNAM----LSGFAHMDRVDEV 365
G D V ++++YS D LFQR+E + + + + D++++
Sbjct: 601 GCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDA 660
Query: 366 SFLFRQMLHEG 376
S + +M G
Sbjct: 661 SRVMNRMRERG 671
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 130/315 (41%), Gaps = 23/315 (7%)
Query: 317 VRNALITMYSRCGDLGHAYMLFQRMEEKGLI----TWNAMLSGFAHMDRVDEVSFLFRQM 372
+RN L R A+ LF M ++ L T++ +++ F D ++M
Sbjct: 162 LRNVL-----RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKM 216
Query: 373 LHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI-MKREQFKEYLLLWNTLVDMYARSG 431
+ + V ++++ L R+ + + K + +KR L+ +N+++++Y ++
Sbjct: 217 EQDRVSGDLVLYSNLIELSRRLCD--YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 274
Query: 432 KVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMV 487
EA+ + + + V+Y+ ++ Y + AL++F EM + D
Sbjct: 275 LFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCN 334
Query: 488 AVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY 547
++ +V + LF + I P + Y + ++G A L +A + M
Sbjct: 335 IMIDVYGQLDMVKEADRLFWSL-RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 548 KPTPAMWATLIGACRIHGNTVLGEWAAGKLLEMK-----PDHSGYYILIANMYAAAGCWS 602
K T +I+G T+ E A + EM+ P+ Y +I+ ++ AG
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS-IWGKAGKLD 452
Query: 603 ELAEVRTYMRNLGVK 617
A + +R+ GV+
Sbjct: 453 RAATLFQKLRSSGVE 467
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 206/493 (41%), Gaps = 47/493 (9%)
Query: 85 LVSFYARFNLFDDA----CIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQ 140
++ +AR N D A + + S + ++ LI+ R + A++ MLR
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 76
Query: 141 VIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVAR 200
+ P TY +++ ACG + +EV K + +G L HN ++S Y + A
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 136
Query: 201 HLFDNMP----ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM--NIIIWNTMAG 254
F+ M D ++N II C + G +A LF M+E+ E +++ + ++
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 255 GYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVL 314
Y G + + M VA + N S+ AL +HG + T VL
Sbjct: 197 LYSVKGEIENCRAVFEAM--------VAEGLKPNIVSY-NALMGAYAVHGMS-GTALSVL 246
Query: 315 DNVRN-----------ALITMYSRCGDLGHAYMLFQRMEEK----GLITWNAMLSGFAHM 359
+++ L+ Y R G A +F M ++ ++T+NA++ +
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL- 418
+ E +FRQM +G +PN V++ ++L C+R K ++ Q + L
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR----SKKKVNVDTVLSAAQSRGINLN 362
Query: 419 --LWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFE 472
+N+ + Y + ++ +A ++ S+ ++ D VT+T +I G + A++ +
Sbjct: 363 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLK 422
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
EM I +VL A S G V + + +F +M G P + Y M + +
Sbjct: 423 EMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNAS 481
Query: 533 GLLNKAKEIITRM 545
KA E+ M
Sbjct: 482 EKWGKACELFLEM 494
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Query: 107 SLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVE 166
+L +N I ++ +A++ Y+ M +K+V D T+ ++ + +
Sbjct: 360 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 419
Query: 167 VHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYA 222
K +E S+ + V+++++ Y+K G++ A +F+ M E D +++ +++ Y
Sbjct: 420 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 479
Query: 223 SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR 273
+ WG+A +LF M+ G+E + I + + + G L+ MR
Sbjct: 480 ASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 530
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 206/493 (41%), Gaps = 47/493 (9%)
Query: 85 LVSFYARFNLFDDA----CIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQ 140
++ +AR N D A + + S + ++ LI+ R + A++ MLR
Sbjct: 149 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 208
Query: 141 VIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVAR 200
+ P TY +++ ACG + +EV K + +G L HN ++S Y + A
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 201 HLFDNMP----ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM--NIIIWNTMAG 254
F+ M D ++N II C + G +A LF M+E+ E +++ + ++
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 255 GYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVL 314
Y G + + M VA + N S+ AL +HG + T VL
Sbjct: 329 LYSVKGEIENCRAVFEAM--------VAEGLKPNIVSY-NALMGAYAVHGMS-GTALSVL 378
Query: 315 DNVRN-----------ALITMYSRCGDLGHAYMLFQRMEEK----GLITWNAMLSGFAHM 359
+++ L+ Y R G A +F M ++ ++T+NA++ +
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLL- 418
+ E +FRQM +G +PN V++ ++L C+R K ++ Q + L
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR----SKKKVNVDTVLSAAQSRGINLN 494
Query: 419 --LWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFE 472
+N+ + Y + ++ +A ++ S+ ++ D VT+T +I G + A++ +
Sbjct: 495 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLK 554
Query: 473 EMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRA 532
EM I +VL A S G V + + +F +M G P + Y M + +
Sbjct: 555 EMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNAS 613
Query: 533 GLLNKAKEIITRM 545
KA E+ M
Sbjct: 614 EKWGKACELFLEM 626
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Query: 107 SLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVE 166
+L +N I ++ +A++ Y+ M +K+V D T+ ++ + +
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 167 VHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYA 222
K +E S+ + V+++++ Y+K G++ A +F+ M E D +++ +++ Y
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 611
Query: 223 SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR 273
+ WG+A +LF M+ G+E + I + + + G L+ MR
Sbjct: 612 ASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 662
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 122/543 (22%), Positives = 210/543 (38%), Gaps = 99/543 (18%)
Query: 54 CINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSL--EP- 110
C LS ++I LG++ +T+ L++ +A + + + +P
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 111 -LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHK 169
+ N L++ N +A+ +M+ P+E TY VLK
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK---------------- 220
Query: 170 AIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRG 225
+ K G+ +A L M ER D V ++ II G
Sbjct: 221 -------------------VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 226 TWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMV 284
+ AF LF M+ +G + +III+ T+ G+ +AG + KLL M + I D VA
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 285 VGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK 344
++ G L+ +E+H ++ G +LI + + L A + M K
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 345 G----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHG 400
G + T+N +++G+ + +D+ LFR+M G + VT
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT----------------- 424
Query: 401 KEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIR 456
+NTL+ + GK+ AK +F + R D V+Y ++
Sbjct: 425 -------------------YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 457 GYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGII 516
G GE + AL IFE++ K K++ D ++ ++ V LF + G+
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVK 524
Query: 517 PRIEHYACMADLFGRAGLLNKAKEIITRMP---YKPTPAMWATLIGACRIHGNTVLGEWA 573
P ++ Y M + G L++A + +M + P + LI R H LGE
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI---RAH----LGEGD 577
Query: 574 AGK 576
A K
Sbjct: 578 ATK 580
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 111/526 (21%), Positives = 220/526 (41%), Gaps = 73/526 (13%)
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALV 187
+A+ +++M R + P + + +++ K +E+ + +L+ + ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 188 SMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVE 243
+ + KL +A + E D V+++T+I+ G EA +L +RM E G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 244 MNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIG----ALKL 298
+I N + G G A+ L+ +M T + V L G A++L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 299 GKEIHGHAVRTGFDVLDNVR-NALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAML 353
+++ ++ LD V+ + +I + G L +A+ LF ME KG +I + ++
Sbjct: 235 LRKMEERKIK-----LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 354 SGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKR--- 410
GF + R D+ + L R M+ P+ V ++++ + L+ +E H +++R
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 411 ----------EQF-KEYLL--------------------LWNTLVDMYARSGKVLEAKRV 439
+ F KE L +N L++ Y ++ + + +
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 440 FDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSH 495
F ++ R D VTY +I+G+ G+ ++A +F+EM +++PD V+ +L
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 496 SGLVAQGQVLFQ-----EMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPY--- 547
+G + +F+ +M D GI I H C A ++ A ++ +P
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC------NASKVDDAWDLFCSLPLKGV 523
Query: 548 KPTPAMWATLIGACRIHGNTVLGEWAAGKLLE--MKPDHSGYYILI 591
KP + +IG G+ + K+ E P+ Y ILI
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 59 SLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDAC----IVTESSSSLEPLHWN 114
L ++LH ++I G +T+ L+ + + N D A ++ +N
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 115 MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGEL---------------- 158
+LI+ + + L + L +RKM + V+ D TY ++++ EL
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 159 ------------LD--CASG-----VEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVA 199
LD C +G +E+ + IE M + ++N ++ K++ A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 200 RHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGG 255
LF ++P + D ++N +I +G+ EA LF +M+E+G N +N +
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 256 YLHAGNFKGALKLLSQMRT---SIHLDHVAMVVGL 287
+L G+ + KL+ +++ S+ V MVV +
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM 606
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 211/507 (41%), Gaps = 108/507 (21%)
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
N+L+ RN +A+S R+M R ++PD F+Y +V++ E G E+ KA+E+
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE------GKELEKALEL 199
Query: 174 GS------MGWSLFVHNALVSMYAKFGKLEVA---------------------------- 199
+ WSL L+ + K GK++ A
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 200 -------RHLFDNMPERDD----VSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIII 248
+ LFD + ER D +++NT+I + G EA ++FE M E GV N+
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 249 WNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVR 308
+ + G G K AL+LL+ M + K+ +AV
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLM-------------------------IEKDEEPNAV- 353
Query: 309 TGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHMDRVDE 364
N +I + G + A + + M+++ IT+N +L G +DE
Sbjct: 354 --------TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 365 VSFLFRQMLHEGA--EPNYVTIASVLPLCARIANLQHGKEFHCYIMKR----EQFKEYLL 418
S L ML + + +P+ ++ +++ + L + + ++++ ++ +L
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 419 LWNTLVDMYARSGKVLEA----KRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEM 474
L +TL ++G V +A K++ DS R+ TYTAMI G+ G +A + +M
Sbjct: 466 LNSTL-----KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 475 CKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGL 534
+++P +L++ G + Q LF+EM D P + + M D +AG
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN-FPDVVSFNIMIDGSLKAGD 579
Query: 535 LNKAKEII---TRMPYKPTPAMWATLI 558
+ A+ ++ +R P ++ LI
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLI 606
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 173/424 (40%), Gaps = 50/424 (11%)
Query: 136 MLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGK 195
ML++ + + + +LK L+C V + + + S+ +F +N ++ + + +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 196 LEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNT 251
LE A L + M V+W +I + G EA + M+ G+E +++++ +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 252 MAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGF 311
+ G+ G LD GK + + G
Sbjct: 253 LIRGFCDCG----------------ELDR------------------GKALFDEVLERGD 278
Query: 312 DVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAMLSGFAHMDRVDEVSF 367
N LI + + G L A +F+ M E+G + T+ ++ G + + E
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 368 LFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMY 427
L M+ + EPN VT ++ + + E +MK+ + + + +N L+
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI-VELMKKRRTRPDNITYNILLGGL 397
Query: 428 ARSGKVLEAKRVF------DSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKP 481
G + EA ++ S T D ++Y A+I G + AL+I++ + +
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 482 DHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEI 541
D V +L + +G V + L+++ + D I+ + Y M D F + G+LN AK +
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQ-ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 542 ITRM 545
+ +M
Sbjct: 517 LCKM 520
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 177/418 (42%), Gaps = 33/418 (7%)
Query: 133 YRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAK 192
+ ++L + P TY ++++ +L E+ + + + +++ + L+
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Query: 193 FGKLEVARHLFDNMPERDD----VSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIII 248
GK + A L + M E+D+ V++N II+ G +A ++ E M++ + I
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 249 WNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAV 307
+N + GG G+ A KLL M + S + D V+ NA H L KE H
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTD--PDVISYNALIH----GLCKENRLHQA 443
Query: 308 RTGFDVL-------DNVR-NALITMYSRCGDLGHAYMLFQRMEEKGLI----TWNAMLSG 355
+D+L D V N L+ + GD+ A L++++ + ++ T+ AM+ G
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKE 415
F ++ L +M +P+ +L + +L + + F +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563
Query: 416 YLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIF 471
++ +N ++D ++G + A+ + ++R D TY+ +I + G A++ F
Sbjct: 564 -VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Query: 472 EEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVD-----DYGIIPRIEHYAC 524
++M +PD +VL C G + L +++VD D + + Y C
Sbjct: 623 DKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 138/331 (41%), Gaps = 32/331 (9%)
Query: 89 YARFNLFDDACIVTESSSSLEPLH-------------WNMLISMFVRNELFVEALSAYRK 135
Y L D C V ++ +L+ L+ +N++I+ ++ L +A+
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 136 MLRKQVIPDEFTYPSVLKA-CGE-LLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKF 193
M +++ PD TY +L C + LD AS + + + +NAL+ K
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 194 GKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIW 249
+L A ++D + E+ D V+ N +++ G +A +L++++ + + N +
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 250 NTMAGGYLHAGNFKGALKLLSQMRTS----IHLDHVAMVVGLNACSHIGALKLGKEIHGH 305
M G+ G A LL +MR S D+ ++ L C G+L +
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL--CKE-GSLDQAWRLFEE 554
Query: 306 AVRTGFDVLDNVR-NALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHMD 360
R + D V N +I + GD+ A L M GL T++ +++ F +
Sbjct: 555 MQRDN-NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613
Query: 361 RVDEVSFLFRQMLHEGAEPNYVTIASVLPLC 391
+DE F +M+ G EP+ SVL C
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 116/535 (21%), Positives = 220/535 (41%), Gaps = 92/535 (17%)
Query: 57 VNSLSPGKQLH-AQVI-----SLGFDQNTIMLPRLVSFYARFNLFDDACI----VTESSS 106
++SL G++ H A+++ +G N + L+ + R D A + ++
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 107 SLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVE 166
L +N LI+ + A +M+ K++ P TY S++ C+ G +
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY-----CSKG-K 487
Query: 167 VHKAIEV------GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPE----RDDVSWNT 216
++KA+ + + S++ L+S + G + A LF+ M E + V++N
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 217 IISCYASRGTWGEAFKLFERMQEEGV---------------------------------- 242
+I Y G +AF+ + M E+G+
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 243 -EMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALK--- 297
E+N I + + G+ G + AL + +M + + LD V V ++ G+LK
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID-----GSLKHKD 662
Query: 298 ------LGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI---- 347
L KE+H ++ D + ++I S+ GD A+ ++ M +G +
Sbjct: 663 RKLFFGLLKEMHDRGLKPD----DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCAR-IANLQHGKEFHCY 406
T+ A+++G V+E L +M + PN VT L + + ++Q E H
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL----TRRDEVTYTAMIRGYGMKG 462
I+K +N L+ + R G++ EA + + D +TYT MI +
Sbjct: 779 ILK--GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 463 EGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
+ + A+ ++ M + I+PD VA ++ C +G + + L EM+ G+IP
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ-GLIP 890
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 120/559 (21%), Positives = 217/559 (38%), Gaps = 95/559 (16%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKA-CGE-LLDCASGVEVHKA 170
+N LI + F EA + +M + + P++ TY ++ C LD A + +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF-LGEM 428
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVAR----HLFDNMPERDDVSWNTIISCYASRGT 226
++ G + S++ +N+L++ + KFG + A + + E V++ +++ Y S+G
Sbjct: 429 VDTG-LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 227 WGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVG 286
+A +L+ M +G+ +I + T+ G AG + A+KL ++M
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-------------- 533
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
E + R + N +I Y GD+ A+ + M EKG+
Sbjct: 534 -------------AEWNVKPNRVTY-------NVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 347 I----TWNAMLSGFAHMDRVDEVSFLFRQMLHEG-AEPNYVTIASVLPLCARIANLQHGK 401
+ ++ ++ G + E +F LH+G E N + +L R L+
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 402 EFHCYIMKREQFKEYLLLWNTLVD--MYARSGKVLEA--KRVFDSLTRRDEVTYTAMIRG 457
C M + L+ + L+D + + K+ K + D + D+V YT+MI
Sbjct: 633 SV-CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 458 YGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
G+ + A I++ M P+ V AV+ +G V + +VL +M +P
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM-QPVSSVP 750
Query: 518 RIEHYACMADL-----------------------------------FGRAGLLNKAKEII 542
Y C D+ F R G + +A E+I
Sbjct: 751 NQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELI 810
Query: 543 TRM---PYKPTPAMWATLIGA-CRIHG-NTVLGEWAAGKLLEMKPDHSGYYILIANMYAA 597
TRM P + T+I CR + + W + ++PD Y LI
Sbjct: 811 TRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC-CV 869
Query: 598 AGCWSELAEVRTYMRNLGV 616
AG + E+R M G+
Sbjct: 870 AGEMGKATELRNEMLRQGL 888
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 166/411 (40%), Gaps = 23/411 (5%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPE---RDDVS-WNTIISCYASRGTWGEAFKLFERMQE 239
+AL+ KF +A LF++M R DV + +I A ++ M+
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLNACSHIGALKL 298
G ++NI+ +N + G A+ + + + D V + + ++
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 299 GKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAMLS 354
G E+ + F + ++L+ + G + A L +R+ + G L +NA++
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 355 GFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFK 414
+ E LF +M G PN VT + ++ + R L F M K
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE-MVDTGLK 434
Query: 415 EYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD----EVTYTAMIRGYGMKGEGQMALNI 470
+ +N+L++ + + G + A+ + + VTYT+++ GY KG+ AL +
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 471 FEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFG 530
+ EM I P +L+ +GL+ LF EM ++ + P Y M + +
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYC 553
Query: 531 RAGLLNKAKEIITRMPYK---PTPAMWATLIGACRIHGNTVLGEWAAGKLL 578
G ++KA E + M K P + L IHG + G+ + K+
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPL-----IHGLCLTGQASEAKVF 599
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 191/460 (41%), Gaps = 54/460 (11%)
Query: 120 FVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWS 179
F+ + F +A + + +M+ Q +P + +L A L + + + +E+ +
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGEAFKLFE 235
L+ L+ + + +L A + M E V++ +++ + G+AF L
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGA 295
M + G E N++++NT+ G G AL+LL++M GL A
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK----------GLGA------ 209
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNA 351
DV+ N L+T G A + + M ++ + +T+ A
Sbjct: 210 ----------------DVV--TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP-LCARIANLQHGKEFHCYIMKR 410
++ F +DE L+++M+ +PN VT S++ LC K F +M
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD--LMAS 309
Query: 411 EQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDEVTYTAMIRGYGMKGEGQM 466
+ ++ +NTL+ + + V E ++F ++ D TY +I GY G+ ++
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369
Query: 467 ALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMA 526
AL+IF M ++ PD + +L +G + V F +M + I I Y M
Sbjct: 370 ALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIG-IVAYNIMI 428
Query: 527 DLFGRAGLLNKAKEIITRMP---YKPTPAMWATLI-GACR 562
+A + KA E+ R+P KP + +I G C+
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 173/413 (41%), Gaps = 42/413 (10%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+ +LI F R ALS KM++ P T+ S+L H
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLL---------------HGFCL 153
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFK 232
V +G + +LV + K G E + V +NT+I G A +
Sbjct: 154 VNRIGDAF----SLVILMVKSGY------------EPNVVVYNTLIDGLCKNGELNIALE 197
Query: 233 LFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACS 291
L M+++G+ +++ +NT+ G ++G + A ++L M + SI+ D V ++
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG----LI 347
G L +E++ +++ D + N++I G L A F M KG ++
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYI 407
T+N ++SGF VDE LF++M EG + T +++ ++ L+ + C++
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377
Query: 408 MKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDE----VTYTAMIRGYGMKGE 463
+ R + ++ L+ +G++ A FD + ++ V Y MI G +
Sbjct: 378 VSRRVTPD-IITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436
Query: 464 GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGII 516
+ A +F + +KPD ++ +G + L + M ++ GII
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE-GII 488
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 148/357 (41%), Gaps = 65/357 (18%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH---- 112
VN + L ++ G++ N ++ L+ D C E + +LE L+
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLI---------DGLCKNGELNIALELLNEMEK 204
Query: 113 ---------WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCAS 163
+N L++ + + +A R M+++ + PD T+ +++ + +
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 164 GVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIIS 219
E++K + S+ + +N++++ G+L A+ FD M + + V++NT+IS
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Query: 220 CYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLD 279
+ E KLF+RM EG +I +NT+ GY G + AL + M
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM------- 377
Query: 280 HVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQ 339
V+ V + +H L HG V G++ A + F
Sbjct: 378 -VSRRVTPDIITHCILL------HGLCVN--------------------GEIESALVKFD 410
Query: 340 RMEEK----GLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIA-SVLPLC 391
M E G++ +N M+ G D+V++ LF ++ EG +P+ T +L LC
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 186/427 (43%), Gaps = 53/427 (12%)
Query: 148 YPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGK----LEVARHLF 203
Y +++ + D G+ V K ++ ++ + L+++Y K GK LEV+R +
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 204 DNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFK 263
+ + + +++ +I+ + W AF +FE M +EG++ ++I++N + + GN
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 264 GALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALIT 323
A++ + +M+ H + + IHG
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPI--------------IHG------------------- 598
Query: 324 MYSRCGDLGHAYMLFQRMEEKGLI----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEP 379
Y++ GD+ + +F M G + T+N +++G ++++ + +M G
Sbjct: 599 -YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 380 NYVTIASVLPLCARIANLQHGKEFHCYI-MKREQFKEYLLLWNTLVDMYARSGKVLEAKR 438
N T ++ A + + GK F + ++ E + + L+ +SG++ A
Sbjct: 658 NEHTYTKIMQGYASVGDT--GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 439 VFDSLTR----RDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACS 494
V ++ R+ Y +I G+ +G+ A ++ ++M K +KPD + ++ACS
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 495 HSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKA---KEIITRMPYKPTP 551
+G + + +EM + G+ P I+ Y + + RA L KA E + M KP
Sbjct: 776 KAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDK 834
Query: 552 AMWATLI 558
A++ L+
Sbjct: 835 AVYHCLL 841
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/548 (19%), Positives = 210/548 (38%), Gaps = 53/548 (9%)
Query: 103 ESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCA 162
E S + +++ + R A + +M + + P Y S++ A D
Sbjct: 302 EKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMD 361
Query: 163 SGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPE----RDDVSWNTII 218
+ + ++ + SL ++ +V ++K G E A + FD + + II
Sbjct: 362 EALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 219 SCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL 278
+ A L M+EEG++ I I++TM GY + K L + +++
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFT 481
Query: 279 DHVAMVVGL-NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYML 337
V L N + +G + E+ G + +I + + D +A+ +
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 338 FQRMEEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCAR 393
F+ M ++G+ I +N ++S F M +D ++M P T ++ A+
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 394 IANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT----RRDEV 449
+++ E +M+R + +N L++ ++ +A + D +T +E
Sbjct: 602 SGDMRRSLEVF-DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 450 TYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
TYT +++GY G+ A F + + D A+L AC SG + + +EM
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 510 ---------------VDDY-------------------GIIPRIEHYACMADLFGRAGLL 535
+D + G+ P I Y +AG +
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 536 NKAKEIITRMP---YKPTPAMWATLI-GACRIH-GNTVLGEWAAGKLLEMKPDHSGYYIL 590
N+A + I M KP + TLI G R L + K + +KPD + Y+ L
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL 840
Query: 591 IANMYAAA 598
+ ++ + A
Sbjct: 841 LTSLLSRA 848
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 108/522 (20%), Positives = 202/522 (38%), Gaps = 95/522 (18%)
Query: 186 LVSMYAKFGKLEVARHLFDNMPERDDVS----WNTIISCYASRGTWGEAFKLFERMQEEG 241
+V Y + G + AR F+ M R + ++I YA EA +M+EEG
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 242 VEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVG------LNACSHIGA 295
+EM+++ ++ + GG+ AG+ + A + + IH A + G C+ A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK-RIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 296 LKLGKEIHG----------HAVRTGFDVLDNVRNA---------------------LITM 324
L +E+ H + G+ ++ + + LI +
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 325 YSRCGDLGHAYMLFQRMEEKG----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN 380
Y++ G + A + + M+E+G L T++ M++GF + +F M+ EG +P+
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 381 YVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVF 440
+ +++ + N+ + M++ + + + ++ YA+SG + + VF
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQ-TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 441 DSLTR---------------------------------------RDEVTYTAMIRGYGMK 461
D + R +E TYT +++GY
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASV 672
Query: 462 GEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEH 521
G+ A F + + D A+L AC SG + + +EM IPR
Sbjct: 673 GDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN--IPRNSF 730
Query: 522 -YACMADLFGRAGLLNKAKEIITRMP---YKPTPAMWATLIGACRIHG--NTVLGEWAAG 575
Y + D + R G + +A ++I +M KP + + I AC G N
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 576 KLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGVK 617
+ L +KP+ Y LI +A A + M+ +G+K
Sbjct: 791 EALGVKPNIKTYTTLIKG-WARASLPEKALSCYEEMKAMGIK 831
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 150/351 (42%), Gaps = 25/351 (7%)
Query: 74 GFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH----WNMLISMFVRNELFVEA 129
GF + L++ Y + A V+ H ++M+I+ FV+ + + A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 130 LSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVSM 189
+ + M+++ + PD Y +++ A + + ++ K ++ + ++
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 190 YAKFGKLEVARHLFDNMPERDDV----SWNTIISCYASRGTWGEAFKLFERMQEEGVEMN 245
YAK G + + +FD M V ++N +I+ + +A ++ + M GV N
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 246 IIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVVGLNACSHIG----ALKLGK 300
+ + GY G+ A + ++++ + +D L AC G AL + K
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 301 EIHGHAV-RTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI----TWNAMLSG 355
E+ + R F V N LI ++R GD+ A L Q+M+++G+ T+ + +S
Sbjct: 719 EMSARNIPRNSF-----VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCY 406
+ ++ + +M G +PN T +++ AR A+L K CY
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWAR-ASLPE-KALSCY 822
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 197/452 (43%), Gaps = 40/452 (8%)
Query: 117 ISMF--VRNEL-FVEALSAYRKMLRKQVIPDEFTYPSVLKACGELL-DCASGVEVH--KA 170
+ MF +R E+ F LS YR ++ K Y +A E+L D V H +
Sbjct: 24 LEMFNSMRKEVGFKHTLSTYRSVIEK------LGYYGKFEAMEEVLVDMRENVGNHMLEG 77
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGT 226
+ VG+M Y + GK++ A ++F+ M E S+N I+S G
Sbjct: 78 VYVGAM-----------KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGY 126
Query: 227 WGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDHVAMVV 285
+ +A K++ RM++ G+ ++ + + AL+LL+ M + ++ VA
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 286 GLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG 345
+ G E+ G + +G + + N L+ + + GD+ L ++ ++G
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246
Query: 346 ----LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGK 401
L T+N + G +D + ++ +G +P+ +T +++ + + Q
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA- 305
Query: 402 EFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKR-----VFDSLTRRDEVTYTAMIR 456
E + M E + +NTL+ Y + G V A+R VF+ D+ TY ++I
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP-DQFTYRSLID 364
Query: 457 GYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGII 516
G +GE AL +F E IKP+ + ++ S+ G++ + L EM + G+I
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM-SEKGLI 423
Query: 517 PRIEHYACMADLFGRAGLLNKAKEIITRMPYK 548
P ++ + + + + G ++ A ++ M K
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 187/465 (40%), Gaps = 67/465 (14%)
Query: 98 ACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGE 157
C++ E + + +N LI +N F EA KM+ + + PD +TY
Sbjct: 275 GCLI-EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY--------- 324
Query: 158 LLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDN------MPERDD 211
N L++ Y K G +++A + + +P D
Sbjct: 325 --------------------------NTLIAGYCKGGMVQLAERIVGDAVFNGFVP--DQ 356
Query: 212 VSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQ 271
++ ++I G A LF +G++ N+I++NT+ G + G A +L ++
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 272 MRTSIHLDHVAMV-VGLNACSHIGALKLGKEIHGHAVRTGF--DVLDNVRNALITMYSRC 328
M + V + +N +G + + + G+ D+ N LI YS
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF--TFNILIHGYSTQ 474
Query: 329 GDLGHAYMLFQRMEEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTI 384
+ +A + M + G+ T+N++L+G + ++V ++ M+ +G PN T
Sbjct: 475 LKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTF 534
Query: 385 ASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLT 444
+L R L MK + + + TL+D + ++G + A +F +
Sbjct: 535 NILLESLCRYRKLDEALGL-LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Query: 445 RRDEV-----TYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLV 499
+V TY +I + K MA +F+EM + PD ++ +G V
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 500 AQGQVLFQEMVDDYGIIP------RIEHYACMAD-LFGRAGLLNK 537
G EM+++ G IP R+ + C+ D ++ AG++++
Sbjct: 654 NLGYKFLLEMMEN-GFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/459 (20%), Positives = 183/459 (39%), Gaps = 34/459 (7%)
Query: 129 ALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHNALVS 188
LS + K+LR + +K C +LLD K I+ G + +LF +N +
Sbjct: 215 CLSTFNKLLRVLCKKGD------VKECEKLLD--------KVIKRGVL-PNLFTYNLFIQ 259
Query: 189 MYAKFGKLEVARH----LFDNMPERDDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEM 244
+ G+L+ A L + P+ D +++N +I + EA +M EG+E
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 245 NIIIWNTMAGGYLHAGNFKGALKLLSQ-MRTSIHLDHVAMVVGLNACSHIGALKLGKEIH 303
+ +NT+ GY G + A +++ + D ++ H G +
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 304 GHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI----TWNAMLSGFAHM 359
A+ G + N LI S G + A L M EKGLI T+N +++G M
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 360 DRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLL 419
V + L + M+ +G P+ T ++ + +++ E +M +
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI-LDVMLDNGVDPDVYT 498
Query: 420 WNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMC 475
+N+L++ ++ K + + ++ + + T+ ++ + AL + EEM
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 476 KFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLL 535
+ PD V ++ +G + LF++M + Y + Y + F +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 536 NKAKEIITRMPYK---PTPAMWATLI-GACRIHGNTVLG 570
A+++ M + P + ++ G C+ GN LG
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKT-GNVNLG 656
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/286 (18%), Positives = 115/286 (40%), Gaps = 11/286 (3%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIE 172
+N+L++ + +A + M+ K PD FT+ ++ L + +E+ +
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWG 228
+ ++ +N+L++ K K E + M E+ + ++N ++
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMV--VG 286
EA L E M+ + V + + + T+ G+ G+ GA L +M + + +
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL 346
++A + + + +++ V ++ + + G++ Y M E G
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Query: 347 I----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYV-TIASV 387
I T +++ DRV E + + +M+ +G P V TI V
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDV 714
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 155/338 (45%), Gaps = 14/338 (4%)
Query: 185 ALVSMYAKFGKLEVARHLFDNMPE----RDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
+LV+ + + ++ A L D M E D V++N II +AF F+ ++ +
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKLG 299
G+ N++ + + G ++ + A +LLS M + I + + L+A G +
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 300 KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAMLSG 355
KE+ VR D ++LI + A +F M KG ++++N +++G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKE 415
F RV++ LFR+M G N VT +++ + ++ +EF M
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ-MDFFGISP 398
Query: 416 YLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIF 471
+ +N L+ +G++ +A +F+ + +R D VTYT +IRG G+ + A ++F
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 472 EEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
+ +KPD V +++ GL+ + + L+ +M
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 147/337 (43%), Gaps = 12/337 (3%)
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGL 287
+A LF M + +I+ +N + + + + L +M I D + +
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 288 NACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG-- 345
N + L I G ++ G++ +L+ + R + A L +M E G
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 346 --LITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
++ +NA++ RV++ F+++ +G PN VT +++ +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 404 HCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYG 459
++K+ + ++ ++ L+D + ++GKVLEAK +F+ + R D VTY+++I G
Sbjct: 248 LSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI 519
+ A +F+ M D V+ ++ + V G LF+EM G++
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNT 365
Query: 520 EHYACMADLFGRAGLLNKAKEIITRMP-YKPTPAMWA 555
Y + F +AG ++KA+E ++M + +P +W
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 145/341 (42%), Gaps = 13/341 (3%)
Query: 58 NSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTES--SSSLEP--LHW 113
N +S L +++ +G+ + + ++ + +DA + + P + +
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 114 NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEV 173
L++ + + +A M++K++ P+ TY ++L A + E+ + +
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 174 GSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGE 229
S+ + +++L++ +++ A +FD M + D VS+NT+I+ + +
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 230 AFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVVGLN 288
KLF M + G+ N + +NT+ G+ AG+ A + SQM I D + L
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 289 ACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL-- 346
G L+ I + D+ +I + G + A+ LF + KGL
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 347 --ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIA 385
+T+ M+SG + EV L+ +M EG N T++
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 191/457 (41%), Gaps = 34/457 (7%)
Query: 128 EALSAYRKMLRKQVIPDEFTYPSVLKA--CGELLDCASGVEVHKAIEVGSMGWSLFVHNA 185
EA ++M + PD TY ++ A LDCA EV + ++ G +
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK--EVFEKMKTGRHKPDRVTYIT 333
Query: 186 LVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEG 241
L+ ++ L+ + + M + D V++ ++ G +GEAF + M+++G
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 242 VEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLN----ACSHIGAL 296
+ N+ +NT+ G L AL+L M + + +V ++ + + AL
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 297 KLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAM 352
+ +++ + NA + ++ G A +F +++ GL +T+N M
Sbjct: 454 ETFEKMKTKGIAPNIVAC----NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHG-KEFHCYIMKRE 411
+ ++ + +DE L +M+ G EP+ + + S++ + + K F MK
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM--RMKEM 567
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMA 467
+ K ++ +NTL+ ++GK+ EA +F+ + ++ + +T+ + E +A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMAD 527
L + +M PD ++ +G V + F +M + P +
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM--KKLVYPDFVTLCTLLP 685
Query: 528 LFGRAGLLNKAKEIITRMPY----KPTPAMWATLIGA 560
+A L+ A +IIT Y +P W LIG+
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 185/460 (40%), Gaps = 44/460 (9%)
Query: 108 LEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEV 167
L +N LI + +++ EA+ YR+M+ + P TY S++ G+ D S + +
Sbjct: 186 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGL 245
Query: 168 HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTW 227
K +E + +++ + + + GK+
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKI------------------------------- 274
Query: 228 GEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHL-DHVAMVVG 286
EA+++ +RM +EG +++ + + A A ++ +M+T H D V +
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 287 LNACSHIGALKLGKEIHGHAVRTGFDVLDNVR-NALITMYSRCGDLGHAYMLFQRMEEKG 345
L+ S L K+ + G V D V L+ + G+ G A+ M ++G
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGH-VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 346 LI----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGK 401
++ T+N ++ G + R+D+ LF M G +P T + + +
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 402 EFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTR----RDEVTYTAMIRG 457
E MK + ++ N + A++G+ EAK++F L D VTY M++
Sbjct: 454 ETF-EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 458 YGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
Y GE A+ + EM + +PD + + +++ + V + +F M + + P
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM-KEMKLKP 571
Query: 518 RIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATL 557
+ Y + G+ G + +A E+ M K P T
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 193/475 (40%), Gaps = 38/475 (8%)
Query: 97 DACIVTESSSSLEPLH-WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC 155
D V L LH +N LI +R +AL + M V P +TY +
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 156 GELLDCASGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPE----RDD 211
G+ D S +E + ++ + ++ NA + AK G+ A+ +F + + D
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 212 VSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQ 271
V++N ++ CY+ G EA KL M E G E ++I+ N++ A A K+ +
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 272 MR----TSIHLDHVAMVVGLNACSHI--------GALKLGKEIHGHAVRTGFDVLDNVRN 319
M+ + + ++ GL I G ++ G + T FD L +N
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL--CKN 621
Query: 320 ALITMYSRCGDLGHAYMLFQRMEE---KGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEG 376
+T+ + MLF+ M+ + T+N ++ G +V E F QM +
Sbjct: 622 DEVTLALK--------MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKL 672
Query: 377 AEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLV-DMYARSG---- 431
P++VT+ ++LP + + ++ + + + L W L+ + A +G
Sbjct: 673 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 732
Query: 432 KVLEAKRVFDSLTRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCK-FKIKPDHVAMVAVL 490
+ V + + R + +IR A +FE+ K ++P ++
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792
Query: 491 TACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
+ ++ Q +F + V G IP + Y + D +G++G +++ E+ M
Sbjct: 793 GGLLEADMIEIAQDVFLQ-VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 135/317 (42%), Gaps = 14/317 (4%)
Query: 180 LFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFE 235
L +N L+ + +E+A+ +F + D ++N ++ Y G E F+L++
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVG--LNACSHI 293
M E N I N + G + AGN AL L + + A G ++ S
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 294 GALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG----LITW 349
G L K++ + G + N LI + + G+ A LF+RM ++G L T+
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 350 NAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 409
+ ++ + RVDE F+++ G P+ V ++ + L+ +
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 410 REQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQ 465
L +N+L+ +G V EA ++++ + R + T+ A+IRGY + G+ +
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Query: 466 MALNIFEEMCKFKIKPD 482
A +++ M P+
Sbjct: 1085 HAYAVYQTMVTGGFSPN 1101
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/536 (20%), Positives = 224/536 (41%), Gaps = 54/536 (10%)
Query: 57 VNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDA--CIVTESSSSLEP--LH 112
V + +L ++++ G + + I++ L++ + + D+A + L+P +
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDC-ASGVEVHKAI 171
+N L++ +N EA+ + M++K P+ T+ + L DC EV A+
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT-------LFDCLCKNDEVTLAL 628
Query: 172 EV----GSMGW--SLFVHNALVSMYAKFGKLEVARHLFDNMPE---RDDVSWNTIISCYA 222
++ MG +F +N ++ K G+++ A F M + D V+ T++
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVV 688
Query: 223 SRGTWGEAFKLFERMQEEGVEMNI-IIWNTMAGGYLHAGNFKGALKLLSQMRTS-IHLDH 280
+A+K+ + + W + G L A+ ++ + I D
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Query: 281 VAMVVGL--NACSHIGALKLGKEIHGHAVRTGFDVLDN---VRNALITMYSRCGDLGHAY 335
+++V + +C H + G RT F+ V+ L T G L A
Sbjct: 749 DSILVPIIRYSCKH-------NNVSG--ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799
Query: 336 ML------FQRMEEKGLI----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIA 385
M+ F +++ G I T+N +L + ++DE+ L+++M E N +T
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 386 SVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL-- 443
V+ + N+ + + +M F + L+D ++SG++ EAK++F+ +
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 444 --TRRDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQ 501
R + Y +I G+G GE A +F+ M K ++PD ++ G V +
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Query: 502 GQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKP--TPAMWA 555
G F+E+ + G+ P + Y + + G++ L +A + M TP ++
Sbjct: 980 GLHYFKEL-KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 190/468 (40%), Gaps = 69/468 (14%)
Query: 136 MLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH-----NALVSMY 190
M+RK PD + V + D S K++ G++ VH N ++
Sbjct: 73 MIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSV-AGNLN---LVHTTETCNYMLEAL 128
Query: 191 AKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQEEGVEMNI 246
GKLE ++FD M +R D ++ TI + +G +A +M+E G +N
Sbjct: 129 RVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNA 188
Query: 247 IIWNTMAGGYLHAGNFKGALKLLSQM-----RTSIHLDHVAMVVGLNACSHIGA-LKLGK 300
+N + L + A+++ +M R S+ + +++VGL I + + L K
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQT-YSSLMVGLGKRRDIDSVMGLLK 247
Query: 301 EIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAMLSGF 356
E+ ++ I + R G + AY + +RM+++G ++T+ ++
Sbjct: 248 EMETLGLKPNVYTF----TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 357 AHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEY 416
++D +F +M +P+ VT ++L + +L K+F M+++
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE-MEKDGHVPD 362
Query: 417 LLLWNTLVDMYARSGKVLEAKRVFDSLT----------------------RRDEV----- 449
++ + LVD ++G EA D + R D+
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 450 ------------TYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSG 497
TY I YG G+ AL FE+M I P+ VA A L + + +G
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Query: 498 LVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
+ + +F + D G++P Y M + + G +++A ++++ M
Sbjct: 483 RDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 126/547 (23%), Positives = 225/547 (41%), Gaps = 87/547 (15%)
Query: 108 LEPLHW--NMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKAC--GELLDCAS 163
L PL + ++LI + + +A S +M V D TY ++ G D A
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 164 GVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNM------PERDDVSWNTI 217
G+ VH+ + G + ++++ + + +K G +E A+ LFD M P+ ++ ++
Sbjct: 333 GL-VHEMVSHG-INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ--AYASL 388
Query: 218 ISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIH 277
I Y + ++L M++ + ++ + T+ G +G+ GA ++ +M S
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 278 LDHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYML 337
+V + LI + + G A +
Sbjct: 449 RPNVV----------------------------------IYTTLIKTFLQNSRFGDAMRV 474
Query: 338 FQRMEEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCAR 393
+ M+E+G+ +N+++ G + R+DE +M+ G +PN T A
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG------AF 528
Query: 394 IANLQHGKEFHCYIMKREQFKEYLLLWNT-----LVDMYARSGKVLEAKRVFDSLTRR-- 446
I+ EF ++ +E +L N L++ Y + GKV+EA + S+ +
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 447 --DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQV 504
D TYT ++ G + A IF EM I PD + ++ S G + +
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 505 LFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYK---PTPAMWATLI-GA 560
+F EMV++ G+ P + Y + F R+G + KAKE++ M K P + T+I G
Sbjct: 649 IFDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 561 CRIHGNTVLGE----WAAGKLLEMKPDHSGYYILIANMYAAAGCWSELAEVRTYMRNLGV 616
C+ G+ L E + KL + PD Y L+ GC L +V + G
Sbjct: 708 CK-SGD--LAEAFRLFDEMKLKGLVPDSFVYTTLV------DGC-CRLNDVERAITIFGT 757
Query: 617 KKAPGCA 623
K GCA
Sbjct: 758 NK-KGCA 763
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 191/480 (39%), Gaps = 106/480 (22%)
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGS 175
LI+ + + +EA SAYR M+ + ++ D TY ++
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG--------------------- 601
Query: 176 MGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAF 231
LF ++ K++ A +F M + D S+ +I+ ++ G +A
Sbjct: 602 ----LFKND----------KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 232 KLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACS 291
+F+ M EEG+ N+II+N + GG+ +G + A +LL +M
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV----------------- 690
Query: 292 HIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGLI---- 347
K +H +AV +I Y + GDL A+ LF M+ KGL+
Sbjct: 691 --------KGLHPNAV---------TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 348 TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIA-NLQHGK-EFHC 405
+ ++ G ++ V+ +F A +S P A I + GK E
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTNKKGCA-------SSTAPFNALINWVFKFGKTELKT 786
Query: 406 YIMKR------EQF-KEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRD----EVTYTAM 454
++ R ++F K + +N ++D + G + AK +F + + +TYT++
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 455 IRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM----- 509
+ GY G +F+E I+PDH+ ++ A G+ + VL +M
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 510 VDDYGIIPRIEHYACMADLFGRAGLLNKAKEI---ITRMPYKPTPAMWATLIGACRIHGN 566
VDD G I + F + G + A+++ + R+ Y P A LI I N
Sbjct: 907 VDD-GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 181/414 (43%), Gaps = 16/414 (3%)
Query: 107 SLEPLHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVE 166
+++P ++ I + + + +A + + M+ +IP Y S+++ + G E
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403
Query: 167 VHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYA 222
+ ++ ++ S + + +V G L+ A ++ M + V + T+I +
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 223 SRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVA 282
+G+A ++ + M+E+G+ +I +N++ G A A L +M + L A
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GLKPNA 522
Query: 283 MVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDN--VRNALITMYSRCGDLGHAYMLFQR 340
G +I A + VL N + LI Y + G + A ++
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582
Query: 341 MEEKGLI----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIAN 396
M ++G++ T+ +++G D+VD+ +FR+M +G P+ + ++ +++ N
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 397 LQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYT 452
+Q M E ++++N L+ + RSG++ +AK + D ++ + + VTY
Sbjct: 643 MQKASSIFDE-MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 453 AMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLF 506
+I GY G+ A +F+EM + PD ++ C V + +F
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 200/490 (40%), Gaps = 28/490 (5%)
Query: 113 WNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGEL--LDCASGVEVHKA 170
+ LI F++N F +A+ ++M + + PD F Y S++ + +D A V
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE-M 513
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPE----RDDVSWNTIISCYASRGT 226
+E G + + F + A +S Y + + A M E + V +I+ Y +G
Sbjct: 514 VENG-LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 227 WGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAMVV 285
EA + M ++G+ + + + G A ++ +MR I D + V
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 286 GLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG 345
+N S +G ++ I V G + N L+ + R G++ A L M KG
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 346 L----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGK 401
L +T+ ++ G+ + E LF +M +G P+ +++ C R+ +++
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA- 751
Query: 402 EFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRV--------FDSLTRRDEVTYTA 453
+ ++ +N L++ + GK V FD + ++VTY
Sbjct: 752 -ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 454 MIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDY 513
MI +G + A +F +M + P + ++L G A+ +F E +
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI-AA 869
Query: 514 GIIPRIEHYACMADLFGRAGLLNKAKEIITRMPYKPTPAMWATL-IGACR--IHGNTVLG 570
GI P Y+ + + F + G+ KA ++ +M K L I CR + G +G
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929
Query: 571 EW-AAGKLLE 579
E A K++E
Sbjct: 930 EMEVAEKVME 939
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 131/308 (42%), Gaps = 21/308 (6%)
Query: 53 GCINVNSLSPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLH 112
G + ++ + +++ G N I+ L+ + R + A + + S ++ LH
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS-VKGLH 694
Query: 113 WN-----MLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEV 167
N +I + ++ EA + +M K ++PD F Y +++ C L D + +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 168 HKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHL--------FDNMPERDDVSWNTIIS 219
+ G S NAL++ KFGK E+ + FD + +DV++N +I
Sbjct: 755 FGTNKKGCAS-STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 220 CYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQ-MRTSIHL 278
G A +LF +MQ + +I + ++ GY G + + + I
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 279 DHVAMVVGLNACSHIG----ALKLGKEIHG-HAVRTGFDVLDNVRNALITMYSRCGDLGH 333
DH+ V +NA G AL L ++ +AV G + + AL++ +++ G++
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 334 AYMLFQRM 341
A + + M
Sbjct: 934 AEKVMENM 941
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 180/420 (42%), Gaps = 32/420 (7%)
Query: 126 FVEALSAYRKMLRKQVIPDEFT------YPSVLKACGELLDCA--SGVEVHKAIEVGSM- 176
F LS KM R V+ F P +L C ++ C S + +G M
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 177 --GW--SLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWG 228
G+ L +L++ Y + ++E A LFD + + + V++ T+I C
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 229 EAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGL 287
A +LF +M G N++ +N + G G + A LL M + I + + +
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 288 NACSHIGALKLGKEIHGHAVRTGF--DVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKG 345
+A +G L KE++ ++ DV +LI G L A +F ME G
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVF--TYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 346 L----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGK 401
+ + ++ GF RV++ +F +M +G N +T ++ + +
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 402 EFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDE----VTYTAMIRG 457
E + R + + +N L+D +GKV +A +F+ + +R+ VTYT +I+G
Sbjct: 384 EVFNQMSSRRAPPD-IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 458 YGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIP 517
G+ + A ++F + +KP+ + +++ GL+ + LF++M +D G +P
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED-GFLP 501
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/472 (20%), Positives = 189/472 (40%), Gaps = 71/472 (15%)
Query: 125 LFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVHN 184
++ A S+YRK+LR + +F + LD + + + + S+
Sbjct: 43 FWIRAFSSYRKILRNGLHNLQF---------NDALDLFTRMVHSRPLP------SIIDFT 87
Query: 185 ALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTIISCYASRGTWGEAFKLFERMQEE 240
L+S+ AK + +V LF+ M + N ++ C A +M +
Sbjct: 88 RLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKL 147
Query: 241 GVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNAC----SHIG-A 295
G E +++ + ++ GY H + A+ L Q+ +V L C H+ A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLF----QRMEEKGLITWNA 351
++L ++ + R NAL+T G G A L +R E +IT+ A
Sbjct: 208 VELFNQMGTNGSRPNVVTY----NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKRE 411
++ F + ++ E L+ M+ P+ T S++ L ++ Y+M+R
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF-YLMERN 322
Query: 412 QFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMA 467
+++ TL+ + +S +V + ++F ++++ + +TYT +I+GY + G +A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 468 LNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM------------------ 509
+F +M + PD +L +G V + ++F+ M
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 510 ------VDD----------YGIIPRIEHYACMADLFGRAGLLNKAKEIITRM 545
V+D G+ P + Y M F R GL+++A + +M
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/342 (18%), Positives = 150/342 (43%), Gaps = 18/342 (5%)
Query: 68 AQVISLGFDQNTIMLPRLVSFYARFNLFDDACIVTES--SSSLEP--LHWNMLISMFVRN 123
+++ LGF+ + + L++ Y +N +DA + + +P + + LI +N
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 124 ELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSMGWSLFVH 183
A+ + +M P+ TY +++ E+ + + + + ++
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 184 NALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQE 239
AL+ + K GKL A+ L++ M + D ++ ++I+ G EA ++F M+
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHVAMVVGLNACSHIGALKL 298
G N +I+ T+ G+ + + +K+ +M + + + + V + +G +
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 299 GKEIHGH--AVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEK----GLITWNAM 352
+E+ + R D+ N L+ G + A M+F+ M ++ ++T+ +
Sbjct: 382 AQEVFNQMSSRRAPPDI--RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 353 LSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLP-LCAR 393
+ G + +V++ LF + +G +PN +T +++ C R
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 48/297 (16%)
Query: 343 EKGLITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKE 402
E L+T+ ++L+G+ H +R+++ LF Q+L G +PN VT +++ + +L H E
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 403 FH----------------------CYI------------MKREQFKEYLLLWNTLVDMYA 428
C I M + + + ++ + L+D +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 429 RSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHV 484
+ GK++EAK +++ + + D TY ++I G M G A +F M + P+ V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 485 AMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITR 544
++ S V G +F EM G++ Y + + G + A+E+ +
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEM-SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 545 MPYKPTPAMWAT----LIGAC---RIHGNTVLGEWAAGKLLEMKPDHSGYYILIANM 594
M + P T L G C ++ ++ E+ + EM + Y I+I M
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR--EMDINIVTYTIIIQGM 443
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 46/284 (16%)
Query: 108 LEP--LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGV 165
+EP + + LI FV+ +EA Y M++ V PD FTY S
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS--------------- 298
Query: 166 EVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCY 221
L++ +G L+ AR +F M ++V + T+I +
Sbjct: 299 --------------------LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 222 ASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDH 280
+ K+F M ++GV N I + + GY G A ++ +QM + D
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 281 VAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQR 340
V L+ G ++ I + + D+ +I + G + A+ LF
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458
Query: 341 MEEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPN 380
+ KG+ IT+ M+SGF + E LF++M +G PN
Sbjct: 459 LFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 122/567 (21%), Positives = 222/567 (39%), Gaps = 91/567 (16%)
Query: 73 LGFDQNTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSA 132
L + TI+L + + +F+ ++ L +H+N+++ + + + S
Sbjct: 152 LSNKERTIILKEQIHWERAVEIFE--WFKSKGCYELNVIHYNIMLRILGKACKWRYVQSL 209
Query: 133 YRKMLRKQVIPDEFTYPSVLKACGELLDCAS--GVEVHKAIEVGSMGW-----SLFVHNA 185
+ +M+RK + P TY G L+D S G++VH +G M
Sbjct: 210 WDEMIRKGIKPINSTY-------GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGI 262
Query: 186 LVSMYAKFGKLEVARHLF----------DNMPERDDVSWNTIISCYASRGTWGEAFKLFE 235
++ MY K + + A F D+ ++NT+I Y G EA + F+
Sbjct: 263 VLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFK 322
Query: 236 RMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGA 295
RM EEG+ + +NTM Y + G L+ M+ D
Sbjct: 323 RMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPD---------------- 366
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNA 351
RT N LI+++++ D+ A F+ M++ GL +++
Sbjct: 367 -----------TRT--------YNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHG----KEFHCY- 406
+L F+ V+E L +M + E + T +++ + L+ K FH
Sbjct: 408 LLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG 467
Query: 407 IMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVF---DSLTRRDEVTYTAMIRGYGMKGE 463
M E + + +D Y G + EA+RVF + +R + Y MI+ YG+
Sbjct: 468 NMSSEGY-------SANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKS 520
Query: 464 GQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYA 523
+ A +FE M + + PD ++ + + + +G+ ++M + G + Y
Sbjct: 521 CEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKM-RETGYVSDCIPYC 579
Query: 524 CMADLFGRAGLLNKAKEIITRM---PYKPTPAMWATLIGACRIHGNTVLGEWAAGKLLEM 580
+ F + G LN A+E+ M +P ++ LI A GN + A + M
Sbjct: 580 AVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNV---QQAMSYVEAM 636
Query: 581 K----PDHSGYYILIANMYAAAGCWSE 603
K P +S Y + +Y G E
Sbjct: 637 KEAGIPGNSVIYNSLIKLYTKVGYLDE 663
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/487 (18%), Positives = 207/487 (42%), Gaps = 60/487 (12%)
Query: 81 MLPRLVSFYARFNLFDDACIVTESSSSLEPLH---------WNMLISMFVRNELFVEALS 131
++P V+F +++ + + E +S ++ + +N+LIS+ +N A +
Sbjct: 329 IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGA 388
Query: 132 AYRKMLRKQVIPDEFTYPSVLKACG--ELLDCASG---------VEVHK----------- 169
+++M + PD +Y ++L A +++ A G VE+ +
Sbjct: 389 YFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYV 448
Query: 170 AIEVGSMGWSLFV------------HNALVSMYAKFGKLEVARHLF---DNMPERDDVSW 214
E+ WS F ++A + Y + G L A +F + +R + +
Sbjct: 449 EAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEY 508
Query: 215 NTIISCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT 274
N +I Y + +A +LFE M GV + +NT+ A L +MR
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRE 568
Query: 275 SIHL-DHVAMVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGH 333
+ ++ D + +++ +G L + +E++ V + V LI ++ G++
Sbjct: 569 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 628
Query: 334 AYMLFQRMEEKGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAE---PNYVTIAS 386
A + M+E G+ + +N+++ + + +DE ++R++L + P+ T
Sbjct: 629 AMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNC 688
Query: 387 VLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTR- 445
++ L + + ++ + + +R + E+ + ++ MY ++G+ EA ++ +
Sbjct: 689 MINLYSERSMVRKAEAIFDSMKQRGEANEFT--FAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 446 ---RDEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQG 502
D ++Y +++ + + G + A+ F+EM I+PD ++ T G+ +
Sbjct: 747 KILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKA 806
Query: 503 QVLFQEM 509
+E+
Sbjct: 807 VRKIEEI 813
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 30/271 (11%)
Query: 116 LISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKA---CGELLDCASGVEVHKAIE 172
+IS FV+ A Y++M+ + PD Y ++ A G + S VE K E
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK--E 638
Query: 173 VGSMGWSLFVHNALVSMYAKFGKLEVARHLFD------NMPERDDV-SWNTIISCYASRG 225
G G S+ ++N+L+ +Y K G L+ A ++ N + DV + N +I+ Y+ R
Sbjct: 639 AGIPGNSV-IYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERS 697
Query: 226 TWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAM- 283
+A +F+ M++ G E N + M Y G F+ A ++ QMR I D ++
Sbjct: 698 MVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYN 756
Query: 284 -VVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME 342
V+GL A G K E V +G D+ +L T+ + LG + +++E
Sbjct: 757 SVLGLFALD--GRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK---LGMSKKAVRKIE 811
Query: 343 E-------KGLITWNAMLSGFAHM-DRVDEV 365
E +GL W + LS + D VDE+
Sbjct: 812 EIRKKEIKRGLELWISTLSSLVGIGDCVDEL 842
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 178/415 (42%), Gaps = 24/415 (5%)
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
+ +N LI+ +EA + KM+ K + D TY +++ ++ D S + +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGT 226
+E + + +++A++ K G A++LF M E+ + ++N +I + S G
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 227 WGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQM-RTSIHLDHV---A 282
W +A +L M E + +++ +N + + G A KL +M I D V +
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 283 MVVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME 342
M+ G C H + H + DV+ N +I +Y R + L + +
Sbjct: 407 MIYGF--CKHN---RFDDAKHMFDLMASPDVV--TFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 343 EKGLI----TWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQ 398
+GL+ T+N ++ GF +D ++ LF++M+ G P+ +T +L L+
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 399 HGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSL----TRRDEVTYTAM 454
E +++ + + +N ++ + KV EA +F SL D TY M
Sbjct: 520 EALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 455 IRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEM 509
I G+ K A +F +M +PD+ ++ C +G + + L EM
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 175/431 (40%), Gaps = 37/431 (8%)
Query: 111 LHWNMLISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKA 170
+ N +I +FVR A+S YRKM +++ + +++ ++K DC HK
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKC---FCDC------HK- 156
Query: 171 IEVGSMGWSLFVHNALVSMYAKFGKLEVA------RHLFDNMPERDDVSWNTIISCYASR 224
+ +SL S + K KL L + D +S + Y
Sbjct: 157 -----LSFSL-------STFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 225 GTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMR-TSIHLDHVAM 283
+ EA LF++M E G+ +I +NT+ G G A L+++M +H+D V
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 284 VVGLNACSHIGALKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEE 343
+N +G K + T + +A+I + G A LF M E
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 344 KGL----ITWNAMLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQH 399
KG+ T+N M+ GF R + L R M+ P+ +T +++ + L
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 400 GKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVLEAKRVFDSLTRRDEVTYTAMIRGYG 459
++ ++ R F + + +N+++ + + + +AK +FD + D VT+ +I Y
Sbjct: 385 AEKLCDEMLHRCIFPD-TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 460 MKGEGQMALNIFEEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRI 519
+ + E+ + + + ++ + Q LFQEM+ +G+ P
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCP-- 500
Query: 520 EHYACMADLFG 530
+ C L+G
Sbjct: 501 DTITCNILLYG 511
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)
Query: 319 NALITMYSRCGDLGHAYMLFQRMEEKG----LITWNAMLSGFAHMDRVDEVSFLFRQMLH 374
N LI + C L + F ++ + G ++T+N +L G DR+ E LF M+
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 375 EGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKEYLLLWNTLVDMYARSGKVL 434
G ++ ++ I ++ +NTL++ G+VL
Sbjct: 205 TG----FLEAVALFDQMVEIG-----------------LTPVVITFNTLINGLCLEGRVL 243
Query: 435 EAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIFEEMCKFKIKPDHVAMVAVL 490
EA + + + + D VTY ++ G G+ + ALN+ +M + IKPD V A++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 491 TACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGRAGLLNKAKEIITRM---PY 547
G + Q LF EM++ GI P + Y CM D F G + A+ ++ M
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEK-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 548 KPTPAMWATLIGACRIHGNTVLGEWAAGKLLE--MKPDHSGYYILI 591
P + LI A G E ++L + PD Y +I
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 133/352 (37%), Gaps = 44/352 (12%)
Query: 61 SPGKQLHAQVISLGFDQNTIMLPRLVSFYARFNLFDDACIV----TESSSSLEPLHWNML 116
S + L ++++ G N ++ + F + DA + E + + L +N L
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 117 ISMFVRNELFVEALSAYRKMLRKQVIPDEFTYPSVLKACGELLDCASGVEVHKAIEVGSM 176
IS V+ EA +ML + + PD TY
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY---------------------------- 404
Query: 177 GWSLFVHNALVSMYAKFGKLEVARHLFDNMPERDDVSWNTIISCYASRGTWGEAFKLFER 236
N+++ + K + + A+H+FD M D V++NTII Y E +L
Sbjct: 405 -------NSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 237 MQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRT-SIHLDHVAMVVGLNACSHIGA 295
+ G+ N +NT+ G+ N A L +M + + D + + L
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 296 LKLGKEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRME----EKGLITWNA 351
L+ E+ + D+ N +I + + A+ LF + E + T+N
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 352 MLSGFAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEF 403
M+SGF + + + LF +M G EP+ T +++ C + + E
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 151/392 (38%), Gaps = 70/392 (17%)
Query: 184 NALVSMYAKFGKLEVARHLFDNMPER----DDVSWNTIISCYASRGTWGEAFKLFERMQE 239
N ++ ++ + + +VA L+ M R + S+N +I C+ + F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 240 EGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTSIHLDHVAMVVGLNACSHIGALKLG 299
G + +++ +NT+ G AL L
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALF------------------------------ 199
Query: 300 KEIHGHAVRTGFDVLDNVRNALITMYSRCGDLGHAYMLFQRMEEKGL----ITWNAMLSG 355
G+ V TGF A LF +M E GL IT+N +++G
Sbjct: 200 ----GYMVETGF--------------------LEAVALFDQMVEIGLTPVVITFNTLING 235
Query: 356 FAHMDRVDEVSFLFRQMLHEGAEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKE 415
RV E + L +M+ +G + VT +++ ++ + + M+ K
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK-MEETHIKP 294
Query: 416 YLLLWNTLVDMYARSGKVLEAKRVFDSLTRR----DEVTYTAMIRGYGMKGEGQMALNIF 471
+++++ ++D + G +A+ +F + + + TY MI G+ G A +
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 472 EEMCKFKIKPDHVAMVAVLTACSHSGLVAQGQVLFQEMVDDYGIIPRIEHYACMADLFGR 531
+M + +I PD + A+++A G + + + L EM+ I P Y M F +
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML-HRCIFPDTVTYNSMIYGFCK 413
Query: 532 AGLLNKAKEIITRMPYKPTPAMWATLIGA-CR 562
+ AK + M P + T+I CR
Sbjct: 414 HNRFDDAKHMFDLMA-SPDVVTFNTIIDVYCR 444
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 107/237 (45%), Gaps = 39/237 (16%)
Query: 78 NTIMLPRLVSFYARFNLFDDACIVTESSSSLEPLHWNMLISMFVRNELFVEALSAYRKML 137
+T+ ++ + + N FDDA + + +S + + +N +I ++ R + E + R++
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 138 RKQVIPDEFTYPSVLK----------------------ACGELLDC-------------A 162
R+ ++ + TY +++ C + + C
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 163 SGVEVHKAIEVGSMGWSLFVHNALVSMYAKFGKLEVARHLFDNMP----ERDDVSWNTII 218
+E+ + I++ + +N ++ K K++ A LF ++P E D ++N +I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 219 SCYASRGTWGEAFKLFERMQEEGVEMNIIIWNTMAGGYLHAGNFKGALKLLSQMRTS 275
S + + +A LF +M++ G E + +NT+ G L AG +++L+S+MR++
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636