Miyakogusa Predicted Gene
- Lj2g3v1549970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1549970.1 Non Chatacterized Hit- tr|I1L582|I1L582_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51172
PE,86.39,0,DEAD-like helicases superfamily,Helicase, superfamily 1/2,
ATP-binding domain; helicase superfamily ,CUFF.37404.1
(708 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 1009 0.0
AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 | chr1:1... 843 0.0
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 395 e-110
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 382 e-106
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 337 2e-92
AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 | chr3:1698180-... 322 7e-88
AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 262 6e-70
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 193 4e-49
AT5G27680.1 | Symbols: RECQSIM | RECQ helicase SIM | chr5:979424... 167 3e-41
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 70 4e-12
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 69 1e-11
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 68 2e-11
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 68 2e-11
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 68 2e-11
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 68 2e-11
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 65 2e-10
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 65 2e-10
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 60 5e-09
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 60 6e-09
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 59 1e-08
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 59 1e-08
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 57 6e-08
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 57 6e-08
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 57 6e-08
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 56 9e-08
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 55 1e-07
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 55 1e-07
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 55 2e-07
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 55 2e-07
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 54 5e-07
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 53 6e-07
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 53 6e-07
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 53 6e-07
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 53 7e-07
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 53 7e-07
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 53 9e-07
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 51 3e-06
AT5G08110.1 | Symbols: | nucleic acid binding;ATP-dependent hel... 50 4e-06
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/712 (67%), Positives = 574/712 (80%), Gaps = 14/712 (1%)
Query: 4 MDNYDVQEELLNIEVEIQDVQDQINALIERQERLYERKSELSDILEACRESGNQV-NNVA 62
M++ +QE+L N++VE++DVQ QI+ALIE Q+RLYERKSEL +L+A SG+ V ++
Sbjct: 1 MESEAIQEDLQNLDVELKDVQGQISALIEHQDRLYERKSELKTLLKALAASGSPVASSGG 60
Query: 63 QTTVENWNGPFQWDSEADDLRLNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLC 122
+ +ENW+ F+WDS ADD+R N+FGIS YR NQ+EI+NA+++GRDVLVIMAAGGGKSLC
Sbjct: 61 SSAIENWSETFEWDSRADDVRFNVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLC 120
Query: 123 YQLPAVLRDGIALVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEG 182
YQLPA+LR G LVVSPL+SLIQDQVMGL ALGI A+ LTST+ KE+EKF+YKALEKGE
Sbjct: 121 YQLPAMLRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGED 180
Query: 183 ELKILYVTPEKISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILK 242
+LKILYVTPEK+SKSKRFMSK+EKCH+AGRLSLISIDEAHCCSQWGHDFRPDYKNL ILK
Sbjct: 181 DLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILK 240
Query: 243 VQFPNVPMVALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVID 302
QFP VPMVALTATATQ+VQNDL+EMLHIP+CVKFVS+VNRPNLFY V+EKS+VGK+V+D
Sbjct: 241 TQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVD 300
Query: 303 EIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWS 362
EIAEFI+ESY N ESGIVYCFSRKECEQ+A +LRERGISAD+YHADMD N REKVHMRWS
Sbjct: 301 EIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWS 360
Query: 363 NNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPG 422
NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSEC+L+FR
Sbjct: 361 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSA 420
Query: 423 DAPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAFPNE 482
D PRQSSMVFYE SGLQNLYDIVRYCQSK +CRRSAFFRHF EP Q+CNGMCD CA +E
Sbjct: 421 DVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEPSQDCNGMCDNCALSSE 480
Query: 483 VTQVDVSGHAKLMVSLLQDMQGNDQRATMLQLFDKMKIKQKELGTELKRXXXXXXXXXXX 542
V +VDVS +KL+VS++Q+ Q DQR TMLQL DK++ K K+L ELKR
Sbjct: 481 VKEVDVSDLSKLVVSMVQETQAKDQRVTMLQLGDKLRNKHKDLIAELKRDEVEHLVIKLI 540
Query: 543 XXXXXXXXFQHTPYATNAYVAVGPLAKQILQGKKTVKLEIYAEERTKAGVRSLKRCHGSS 602
FQHTPY+TNAYV +GPLA Q+LQG+KT+K+E + +TK RS+ +
Sbjct: 541 VDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMET-SSRQTKKLKRSI------T 593
Query: 603 SSGXXXXXXXXXXXXASVHGGILPHSVLSTQQISLLCSQKPNLLEQLEKVIGKLKTEKYG 662
SG ++ G ILPH+VLSTQQI + SQKP L++LE +IGKLKTEKYG
Sbjct: 594 FSGLELKLDELRKEISAADGSILPHTVLSTQQIGSISSQKPVSLQELESIIGKLKTEKYG 653
Query: 663 KRILEQIEKYSDFK------PTDEQVTDGRAAKRSKTKKNLVVIDSSEDEEA 708
RILE++ ++ PT E+ R KR+KT+K++V+++SS +EEA
Sbjct: 654 DRILEEVMRHEAVSEQLVEDPTKEETCKSRLRKRAKTQKDVVLVESSGEEEA 705
>AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 |
chr1:11233174-11237412 FORWARD LENGTH=580
Length = 580
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/587 (68%), Positives = 471/587 (80%), Gaps = 13/587 (2%)
Query: 128 VLRDGIALVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKIL 187
+LR G LVVSPL+SLIQDQVMGL ALGI A+ LTST+ KE+EKF+YKALEKGE +LKIL
Sbjct: 1 MLRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKIL 60
Query: 188 YVTPEKISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPN 247
YVTPEK+SKSKRFMSK+EKCH+AGRLSLISIDEAHCCSQWGHDFRPDYKNL ILK QFP
Sbjct: 61 YVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPK 120
Query: 248 VPMVALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEF 307
VPMVALTATATQ+VQNDL+EMLHIP+CVKFVS+VNRPNLFY V+EKS+VGK+V+DEIAEF
Sbjct: 121 VPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEF 180
Query: 308 IQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQ 367
I+ESY N ESGIVYCFSRKECEQ+A +LRERGISAD+YHADMD N REKVHMRWS NKLQ
Sbjct: 181 IRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQ 240
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQ 427
VIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSEC+L+FR D PRQ
Sbjct: 241 VIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADVPRQ 300
Query: 428 SSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAFPNEVTQVD 487
SSMVFYE SGLQNLYDIVRYCQSK +CRRSAFFRHF EP Q+CNGMCD CA +EV +VD
Sbjct: 301 SSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEPSQDCNGMCDNCALSSEVKEVD 360
Query: 488 VSGHAKLMVSLLQDMQGNDQRATMLQLFDKMKIKQKELGTELKRXXXXXXXXXXXXXXXX 547
VS +KL+VS++Q+ Q DQR TMLQL DK++ K K+L ELKR
Sbjct: 361 VSDLSKLVVSMVQETQAKDQRVTMLQLGDKLRNKHKDLIAELKRDEVEHLVIKLIVDSVL 420
Query: 548 XXXFQHTPYATNAYVAVGPLAKQILQGKKTVKLEIYAEERTKAGVRSLKRCHGSSSSGXX 607
FQHTPY+TNAYV +GPLA Q+LQG+KT+K+E + +TK RS+ + SG
Sbjct: 421 KEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMET-SSRQTKKLKRSI------TFSGLE 473
Query: 608 XXXXXXXXXXASVHGGILPHSVLSTQQISLLCSQKPNLLEQLEKVIGKLKTEKYGKRILE 667
++ G ILPH+VLSTQQI + SQKP L++LE +IGKLKTEKYG RILE
Sbjct: 474 LKLDELRKEISAADGSILPHTVLSTQQIGSISSQKPVSLQELESIIGKLKTEKYGDRILE 533
Query: 668 QIEKYSDFK------PTDEQVTDGRAAKRSKTKKNLVVIDSSEDEEA 708
++ ++ PT E+ R KR+KT+K++V+++SS +EEA
Sbjct: 534 EVMRHEAVSEQLVEDPTKEETCKSRLRKRAKTQKDVVLVESSGEEEA 580
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/466 (43%), Positives = 285/466 (61%), Gaps = 27/466 (5%)
Query: 73 FQWDSEADDLRLNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDG 132
F W + + +FG S+R NQREI+NA +SG DV V+M GGGKSL YQLPA++ G
Sbjct: 435 FPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICGG 494
Query: 133 IALVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPE 192
I LV+SPL+SLIQDQ+M L IPA L++ ++ I++ L + K+LYVTPE
Sbjct: 495 ITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPE 554
Query: 193 KISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVA 252
K++KS + +E + G L+ IDEAHC SQWGHDFRPDY++LGILK +FPN+P++A
Sbjct: 555 KVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLA 614
Query: 253 LTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESY 312
LTATAT V+ D+V+ L + CV F + NRPNL+Y V K+ K +++I +FI+E++
Sbjct: 615 LTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT---KKCLEDIDKFIKENH 671
Query: 313 PNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGT 372
+ E GI+YC SR +CE+V++ L+E G A YH M+ R + +WS +++ +I T
Sbjct: 672 FD-ECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICAT 730
Query: 373 VAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPR------ 426
VAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S CVLY+ GD R
Sbjct: 731 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMIS 790
Query: 427 -----QSSMVFYEN----------SGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQ--E 469
QS M N + +NL +VRYC+++ +CRR H E
Sbjct: 791 QGGVDQSPMATGYNRVASSGRLLETNTENLLRMVRYCENEVECRRFLQLVHLGEKFDSTN 850
Query: 470 CNGMCDICAFPNEVTQVDVSGHAKLMVSLLQDMQGNDQRATMLQLF 515
C CD C + DV+ + +V L++ A +L+++
Sbjct: 851 CKKTCDNCCSSQSLIDKDVTLITRQLVELVKQTGERFSSAHILEVY 896
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/486 (42%), Positives = 286/486 (58%), Gaps = 36/486 (7%)
Query: 39 ERKSELSDILEACRESGNQVNNVAQTTVENWNGP-FQWDSEADDLRLNIFGISSYRVNQR 97
ER+ +S++++ V + + + W F W + +FG S+R NQR
Sbjct: 424 EREQSVSEVID--------VTDTESSNDKKWTSSDFPWTKNLEVYNKLVFGNHSFRPNQR 475
Query: 98 EIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALGIP 157
EI+NA +SG DV V+M GGGKSL YQLPA+L GI LV+SPL+SLIQDQ+M L I
Sbjct: 476 EIINATMSGCDVFVLMPTGGGKSLTYQLPALLCAGITLVISPLVSLIQDQIMNLLQTNIS 535
Query: 158 AHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMSKIEKCHHAGRLSLIS 217
A L++ ++ I + L + + K+LYVTPEK++KS+ + +E + L+
Sbjct: 536 AASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSESLLRHLEILNSRSLLARFV 595
Query: 218 IDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQNDLVEMLHIPRCVKF 277
IDEAHC SQWGHDFRPDY+ LG+LK +FPN+PM+ALTATAT V+ D+V+ L + CV F
Sbjct: 596 IDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVF 655
Query: 278 VSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRE 337
+ NRPNL+Y V K++ +++I +FI+E++ + E GI+YC SR +CE+V + LR
Sbjct: 656 RQSFNRPNLWYSVVPKTN---KCLEDIDKFIRENHFD-ECGIIYCLSRMDCEKVTEALRV 711
Query: 338 RGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSME 397
G A YH MD R V +WS +++ +I TVAFGMGINKPDVRFVIHHSL KS+E
Sbjct: 712 FGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIE 771
Query: 398 TYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMVFYENSG-------------------- 437
Y+QE GRAGRDG S CVLY+ D R M+ G
Sbjct: 772 GYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLET 831
Query: 438 -LQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQ--ECNGMCDICAFPNEVTQVDVSGHAKL 494
+NL +V YC+++ CRR H E C CD C+ + DV+ A+
Sbjct: 832 NTENLLRMVSYCENEVDCRRFLQLVHLGEKFDSTNCKNTCDNCSSSKILIDKDVTVIARQ 891
Query: 495 MVSLLQ 500
+V+L++
Sbjct: 892 LVALVK 897
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 245/411 (59%), Gaps = 19/411 (4%)
Query: 87 FGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQD 146
FG + +R Q E + AV+SGRD +M GGGKS+CYQ+PA+ + GI LVVSPLI+L+++
Sbjct: 32 FGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVLVVSPLIALMEN 91
Query: 147 QVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMSKIEK 206
QVM L GI A L+ST + + I++ L+ G+ +++LYVTPE I+ +K FM K+ K
Sbjct: 92 QVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIA-TKGFMLKLRK 150
Query: 207 CHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQNDLV 266
H G L+LI+IDEAHC S WGHDFRP Y+ L L+ +VP++ALTATA +VQ D++
Sbjct: 151 LHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVI 210
Query: 267 EMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNKESGIVYCFSRK 326
+ L++ + S+ NRPN+FY V+ K + D + ++ I+YC R
Sbjct: 211 DSLNLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTD-LGNLLKSC--GNICAIIYCLERT 267
Query: 327 ECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRF 386
C+ ++ L GIS+ YHA ++ R V W ++K Q+IV TVAFGMGI+K DVR
Sbjct: 268 TCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRM 327
Query: 387 VIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMVFYENS---------- 436
V H ++ KSME++YQESGRAGRD LPS VLY+ D R+ NS
Sbjct: 328 VCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDD--RKKMEYLLRNSENKKSSSSKK 385
Query: 437 GLQNLYDIVRYCQSKRQCRRSAFFRHFAE--PLQECNGMCDICAFPNEVTQ 485
+ IV YC+ CRR F E P+Q+C CD C PN+V
Sbjct: 386 PTSDFEQIVTYCEGS-GCRRKKILESFGEEFPVQQCKKTCDACKHPNQVAH 435
>AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 |
chr3:1698180-1701228 FORWARD LENGTH=606
Length = 606
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/399 (42%), Positives = 239/399 (59%), Gaps = 17/399 (4%)
Query: 80 DDLR---LNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALV 136
DDL L IFG +R Q + A + +D V+M GGGKSLCYQLPA L+ G+ +V
Sbjct: 192 DDLEFANLVIFGNKVFRPLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATLKAGVTIV 251
Query: 137 VSPLISLIQDQVMGLT-ALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKIS 195
+SPL+SLIQDQ++ L GIPA L S + + + L + K+LYVTPEKI+
Sbjct: 252 ISPLLSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAVLQELRRDNPSCKLLYVTPEKIA 311
Query: 196 KSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTA 255
S F+ + G L+ +DEAHC SQWGHDFRPDY+ LG LK FP VP++ALTA
Sbjct: 312 GSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVPVMALTA 371
Query: 256 TATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNK 315
TAT+ V D+++ L IPR + +R NL Y V K+ K + ++ E +++ + +
Sbjct: 372 TATESVCQDVLKSLRIPRAPVLKMSFDRINLKYEVIVKT---KEPLKQLQELLRDRFKD- 427
Query: 316 ESGIVYCFSRKECEQVAKELRER-GISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVA 374
+SGIVYC S+ EC VAK L E+ + +YHA + R V +W +++++ T+A
Sbjct: 428 QSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIA 487
Query: 375 FGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMVFYE 434
FGMGI+K DVRFVIH++LSK++E+YYQESGRAGRDGL ++C+ ++ D R M+
Sbjct: 488 FGMGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCMLRNG 547
Query: 435 N--------SGLQNLYDIVRYCQSKRQCRRSAFFRHFAE 465
S + + +YC+ K +CRR +F E
Sbjct: 548 QGRNMDRFKSAMAQAKKMQQYCELKTECRRQMLLEYFGE 586
>AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936788-16940172 FORWARD
LENGTH=620
Length = 620
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 198/349 (56%), Gaps = 19/349 (5%)
Query: 149 MGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMSKIEKCH 208
M L GI A L+ST + + I++ L+ G+ +++LYVTPE I+ +K FM K+ K H
Sbjct: 1 MALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIA-TKGFMLKLRKLH 59
Query: 209 HAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQNDLVEM 268
G L+LI+IDEAHC S WGHDFRP Y+ L L+ +VP++ALTATA +VQ D+++
Sbjct: 60 SRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDS 119
Query: 269 LHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNKESGIVYCFSRKEC 328
L++ + S+ NRPN+FY V+ K + D + ++ I+YC R C
Sbjct: 120 LNLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTD-LGNLLKSC--GNICAIIYCLERTTC 176
Query: 329 EQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVI 388
+ ++ L GIS+ YHA ++ R V W ++K Q+IV TVAFGMGI+K DVR V
Sbjct: 177 DDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVC 236
Query: 389 HHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMVFYENS----------GL 438
H ++ KSME++YQESGRAGRD LPS VLY+ D R+ NS
Sbjct: 237 HFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDD--RKKMEYLLRNSENKKSSSSKKPT 294
Query: 439 QNLYDIVRYCQSKRQCRRSAFFRHFAE--PLQECNGMCDICAFPNEVTQ 485
+ IV YC+ CRR F E P+Q+C CD C PN+V
Sbjct: 295 SDFEQIVTYCEGS-GCRRKKILESFGEEFPVQQCKKTCDACKHPNQVAH 342
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 200/352 (56%), Gaps = 20/352 (5%)
Query: 77 SEADDLRLN-----IFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRD 131
+EA D L ++G S+R Q + + +L G ++++ G GKSLCYQ+PA++
Sbjct: 250 TEASDENLTKLLNLVYGYDSFRDGQLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAMILP 309
Query: 132 GIALVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTP 191
GI LVVSPL+SL+ DQ+ L ++ I L+S+ E+ + L+ EG +K+L+V+P
Sbjct: 310 GITLVVSPLVSLMIDQLKHLPSI-IKGGLLSSSQRPEEATETLRKLK--EGIIKVLFVSP 366
Query: 192 EKISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNL--GILKVQFPNVP 249
E++ + F+S + +SL+ +DEAHC S+W H+FRP Y L +L +
Sbjct: 367 ERLLNVE-FLSMF---RMSLSVSLVVVDEAHCVSEWSHNFRPSYMRLKASMLFSELKAEC 422
Query: 250 MVALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQ 309
++A+TATAT ++ L IP + R N V S G + ++ +
Sbjct: 423 ILAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSV---SLSGANRMKDLL-ILM 478
Query: 310 ESYPNKE--SGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQ 367
ES P KE S IVYC + E + ++K LR+ I+A YH+ + R ++ + +NK++
Sbjct: 479 ESPPYKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIR 538
Query: 368 VIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF 419
V+V TVAFGMG++K DV VIH S+ SME Y QE GRAGRDG S C L++
Sbjct: 539 VVVATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFY 590
>AT5G27680.1 | Symbols: RECQSIM | RECQ helicase SIM |
chr5:9794244-9798637 REVERSE LENGTH=858
Length = 858
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 159/281 (56%), Gaps = 28/281 (9%)
Query: 22 DVQDQINALIERQERLYERKSELSDILEA-CRESGNQVNNVAQTTVENWNGPFQWDSEAD 80
+V Q+ + E E + RKS +E+ C G +N ++ + W+ +
Sbjct: 107 EVDSQLETVSEHSEEV--RKSLAPVFMESSCFPEGQLLNGCSEASS-------SWEKRVN 157
Query: 81 DLRLNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPL 140
+ N FGISS R QRE ++ ++ +D LV+ A G GKSLC+Q+PA+L + +V+SPL
Sbjct: 158 SILRNRFGISSLRSFQREALSTWVAHKDCLVLAATGSGKSLCFQIPALLTGKVVVVISPL 217
Query: 141 ISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKISKSKRF 200
ISL+ DQ + L+ + A L S + D KA+ +G +I+YV PE + + +
Sbjct: 218 ISLMHDQCLKLSRHKVSACFLGS--GQLDNCIEEKAM---QGMYQIIYVCPETVVRLIKP 272
Query: 201 MSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFP---------NVPMV 251
+ K+ K H ++L +IDEAHC S+WGHDFRP Y+ L +L+ F +VP++
Sbjct: 273 LQKLAKTHG---IALFAIDEAHCVSKWGHDFRPHYRKLSVLRENFCASNLEFLEYDVPIM 329
Query: 252 ALTATATQRVQNDLVEMLHIPRCVKFV-STVNRPNLFYMVK 291
ALTATAT VQ D++E LH+ + K V ++ RPNL + VK
Sbjct: 330 ALTATATVNVQEDILESLHLSKETKIVLTSFFRPNLQFSVK 370
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 15/190 (7%)
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
I+Y +RKE +AK L G+ A Y+A + +VH + +NKLQV+V T+AFGMG
Sbjct: 501 IIYVPTRKESVNIAKYLCGVGLKAAAYNASLPKKHLRQVHQDFHDNKLQVVVATIAFGMG 560
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMVFYENSGL 438
I+K +VR +IH+ +S+E YYQE+GRAGRDG +ECVLY D R +++ S
Sbjct: 561 IDKKNVRKIIHYGWLQSLEAYYQEAGRAGRDGELAECVLY---ADLSRAPTLLPSRRSKE 617
Query: 439 QN------LYDIVRYCQSKRQCRRSAFFRHFAEPL--QECNGMCDICA-FPNEVTQVDVS 489
Q L D RY + QCR +F E ++CN CD+C P E+ VDV
Sbjct: 618 QTEQAYKMLSDCFRYGMNTSQCRAKILVEYFGEEFSSKKCNS-CDVCTEGPPEL--VDVR 674
Query: 490 GHAKLMVSLL 499
A L+ ++
Sbjct: 675 EEANLLFQVI 684
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 145/339 (42%), Gaps = 45/339 (13%)
Query: 103 VLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALGIPAHKLT 162
+ GRD++ I G GK+L Y LPA+ + + P+++ ++ + A P +L
Sbjct: 133 AMKGRDLIGIAETGSGKTLSYLLPAI----VHVNAQPMLAHGDGPIVLVLA---PTRELA 185
Query: 163 STTSKEDEKF----------IYKALEKG------EGELKILYVTPEKISKSKRFMSKIEK 206
+E KF IY + KG + ++I+ TP R + +E
Sbjct: 186 VQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATP------GRLIDMMES 239
Query: 207 CH-HAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQNDL 265
+ + R++ + +DEA G D P + I+ P+ + +AT + V+
Sbjct: 240 NNTNLRRVTYLVLDEADRMLDMGFD--PQIRK--IVSHIRPDRQTLYWSATWPKEVEQLS 295
Query: 266 VEMLHIPRCVKFVSTVNRPN-----LFYMVKEKSSVGKVVIDEIAEFIQESYPNKESGIV 320
+ L+ P V S+ + N + ++ E K+V ++ E I + +V
Sbjct: 296 KKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLV--KLLEDIMDG----SRILV 349
Query: 321 YCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGIN 380
+ ++K C+Q+ ++LR G A H D R+ V + + K ++ T G++
Sbjct: 350 FLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLD 409
Query: 381 KPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF 419
DV++VI++ S+E Y GR GR G +F
Sbjct: 410 VKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFF 448
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 136/349 (38%), Gaps = 65/349 (18%)
Query: 103 VLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALGIPAHKLT 162
L GRD++ I G GK+L Y LPA++ VS L QD + L P +L
Sbjct: 199 ALKGRDLIGIAETGSGKTLAYLLPALVH------VSAQPRLGQDDGPIVLILA-PTRELA 251
Query: 163 STTSKEDEKF----------IYKALEKGEGELKILYVTPEKISKSKRFMSKIEKCHHAG- 211
+E KF IY KG + I+ R + +E C H
Sbjct: 252 VQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE-CQHTNL 310
Query: 212 -RLSLISIDEAHCCSQWGHD---------FRPDYKNL----------GILKVQFPNVPMV 251
R++ + +DEA G + RPD + L L QF P
Sbjct: 311 KRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYK 370
Query: 252 ALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPN-LFYMVKEKSSVGKVVIDEIAEFIQE 310
A+ + DL I + ++ V T + N L ++K+ K++I F++
Sbjct: 371 AIIGS------TDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI-----FVE- 418
Query: 311 SYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIV 370
+++ C+QV ++LR G A H D + R++V + + + ++
Sbjct: 419 -------------TKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMT 465
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF 419
T G++ D++ V+++ ++E Y GR GR G +F
Sbjct: 466 ATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFF 514
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 150/367 (40%), Gaps = 48/367 (13%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQ 147
G S+ Q + + GRD++ I G GK+L Y +P L L + D
Sbjct: 177 GFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH---------LQRIRNDS 227
Query: 148 VMGLTALGI-PAHKLTSTTSKEDEKF----------IYKALEKG------EGELKILYVT 190
MG T L + P +L + +E KF +Y KG E I+ T
Sbjct: 228 RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVAT 287
Query: 191 PEKISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPM 250
P +++ M +I +S + +DEA G F P + I+K
Sbjct: 288 PGRLNDILE-MRRISLRQ----ISYLVLDEADRMLDMG--FEPQIRK--IVKEIPTKRQT 338
Query: 251 VALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKS---SVGKVVIDEIAEF 307
+ TAT + V+ ++L P + VN N+ +V KS + V E
Sbjct: 339 LMYTATWPKGVRKIAADLLVNP------AQVNIGNVDELVANKSITQHIEVVAPMEKQRR 392
Query: 308 IQESYPNKESG---IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNN 364
+++ ++E G I++C +++ C+Q+ + L R A H D R+ V ++ +
Sbjct: 393 LEQILRSQEPGSKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSG 451
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDA 424
+ V+V T G++ D+R V+++ +E Y GR GR G + +F D+
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDS 511
Query: 425 PRQSSMV 431
S ++
Sbjct: 512 KHASDLI 518
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 150/367 (40%), Gaps = 48/367 (13%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQ 147
G S+ Q + + GRD++ I G GK+L Y +P L L + D
Sbjct: 177 GFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH---------LQRIRNDS 227
Query: 148 VMGLTALGI-PAHKLTSTTSKEDEKF----------IYKALEKG------EGELKILYVT 190
MG T L + P +L + +E KF +Y KG E I+ T
Sbjct: 228 RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVAT 287
Query: 191 PEKISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPM 250
P +++ M +I +S + +DEA G F P + I+K
Sbjct: 288 PGRLNDILE-MRRISLRQ----ISYLVLDEADRMLDMG--FEPQIRK--IVKEIPTKRQT 338
Query: 251 VALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKS---SVGKVVIDEIAEF 307
+ TAT + V+ ++L P + VN N+ +V KS + V E
Sbjct: 339 LMYTATWPKGVRKIAADLLVNP------AQVNIGNVDELVANKSITQHIEVVAPMEKQRR 392
Query: 308 IQESYPNKESG---IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNN 364
+++ ++E G I++C +++ C+Q+ + L R A H D R+ V ++ +
Sbjct: 393 LEQILRSQEPGSKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSG 451
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDA 424
+ V+V T G++ D+R V+++ +E Y GR GR G + +F D+
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDS 511
Query: 425 PRQSSMV 431
S ++
Sbjct: 512 KHASDLI 518
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 150/367 (40%), Gaps = 48/367 (13%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQ 147
G S+ Q + + GRD++ I G GK+L Y +P L L + D
Sbjct: 177 GFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH---------LQRIRNDS 227
Query: 148 VMGLTALGI-PAHKLTSTTSKEDEKF----------IYKALEKG------EGELKILYVT 190
MG T L + P +L + +E KF +Y KG E I+ T
Sbjct: 228 RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVAT 287
Query: 191 PEKISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPM 250
P +++ M +I +S + +DEA G F P + I+K
Sbjct: 288 PGRLNDILE-MRRISLRQ----ISYLVLDEADRMLDMG--FEPQIRK--IVKEIPTKRQT 338
Query: 251 VALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKS---SVGKVVIDEIAEF 307
+ TAT + V+ ++L P + VN N+ +V KS + V E
Sbjct: 339 LMYTATWPKGVRKIAADLLVNP------AQVNIGNVDELVANKSITQHIEVVAPMEKQRR 392
Query: 308 IQESYPNKESG---IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNN 364
+++ ++E G I++C +++ C+Q+ + L R A H D R+ V ++ +
Sbjct: 393 LEQILRSQEPGSKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSG 451
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDA 424
+ V+V T G++ D+R V+++ +E Y GR GR G + +F D+
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDS 511
Query: 425 PRQSSMV 431
S ++
Sbjct: 512 KHASDLI 518
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 150/367 (40%), Gaps = 48/367 (13%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQ 147
G S+ Q + + GRD++ I G GK+L Y +P L L + D
Sbjct: 177 GFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH---------LQRIRNDS 227
Query: 148 VMGLTALGI-PAHKLTSTTSKEDEKF----------IYKALEKG------EGELKILYVT 190
MG T L + P +L + +E KF +Y KG E I+ T
Sbjct: 228 RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVAT 287
Query: 191 PEKISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPM 250
P +++ M +I +S + +DEA G F P + I+K
Sbjct: 288 PGRLNDILE-MRRISLRQ----ISYLVLDEADRMLDMG--FEPQIRK--IVKEIPTKRQT 338
Query: 251 VALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKS---SVGKVVIDEIAEF 307
+ TAT + V+ ++L P + VN N+ +V KS + V E
Sbjct: 339 LMYTATWPKGVRKIAADLLVNP------AQVNIGNVDELVANKSITQHIEVVAPMEKQRR 392
Query: 308 IQESYPNKESG---IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNN 364
+++ ++E G I++C +++ C+Q+ + L R A H D R+ V ++ +
Sbjct: 393 LEQILRSQEPGSKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSG 451
Query: 365 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDA 424
+ V+V T G++ D+R V+++ +E Y GR GR G + +F D+
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDS 511
Query: 425 PRQSSMV 431
S ++
Sbjct: 512 KHASDLI 518
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 143/357 (40%), Gaps = 58/357 (16%)
Query: 103 VLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALGI-PAHKL 161
+ RD++ I G GK+L Y +P + L + D MG T L + P +L
Sbjct: 195 AMQNRDIVAIAKTGSGKTLGYLIPGFMH---------LQRIHNDSRMGPTILVLSPTREL 245
Query: 162 TSTTSKEDEKF----------IYKALEKG------EGELKILYVTPEKISKSKRFMSKIE 205
+ E KF +Y KG E + I+ TP +++ M +I
Sbjct: 246 ATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILE-MKRIS 304
Query: 206 KCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPM----VALTATATQRV 261
H +S + +DEA G F P + + VP + TAT + V
Sbjct: 305 -LHQ---VSYLVLDEADRMLDMG--FEPQIRKI------VNEVPTKRQTLMYTATWPKEV 352
Query: 262 QNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVI-------DEIAEFIQESYPN 314
+ ++L P + VN N+ +V KS + + + + ++ P
Sbjct: 353 RKIAADLLVNP------AQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPG 406
Query: 315 KESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVA 374
+ I++C +++ C+Q+A+ L R A H D R+ V ++ + + V+V T
Sbjct: 407 SKI-IIFCSTKRMCDQLARNL-TRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDV 464
Query: 375 FGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGDAPRQSSMV 431
G++ D+R V+++ +E Y GR GR G +F DA S ++
Sbjct: 465 AARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLI 521
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 148/372 (39%), Gaps = 58/372 (15%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQ 147
G S+ Q + + RD++ I G GK+L Y +P + L + D
Sbjct: 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMH---------LQRIHNDS 298
Query: 148 VMGLTALGI-PAHKLTSTTSKEDEKF----------IYKALEKG------EGELKILYVT 190
MG T L + P +L + E KF +Y KG E + I+ T
Sbjct: 299 RMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVAT 358
Query: 191 PEKISKSKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPM 250
P +++ M +I H +S + +DEA G F P + + VP
Sbjct: 359 PGRLNDILE-MKRIS-LHQ---VSYLVLDEADRMLDMG--FEPQIRKI------VNEVPT 405
Query: 251 ----VALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVI----- 301
+ TAT + V+ ++L P + VN N+ +V KS + +
Sbjct: 406 KRQTLMYTATWPKEVRKIAADLLVNP------AQVNIGNVDELVANKSITQTIEVLAPME 459
Query: 302 --DEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHM 359
+ + ++ P + I++C +++ C+Q+A+ L R A H D R+ V
Sbjct: 460 KHSRLEQILRSQEPGSKI-IIFCSTKRMCDQLARNL-TRTFGAAAIHGDKSQAERDDVLN 517
Query: 360 RWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF 419
++ + + V+V T G++ D+R V+++ +E Y GR GR G +F
Sbjct: 518 QFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFF 577
Query: 420 RPGDAPRQSSMV 431
DA S ++
Sbjct: 578 GDQDAKHASDLI 589
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 147/356 (41%), Gaps = 61/356 (17%)
Query: 88 GISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQ 147
GI Q + + VLSGRD++ I G GK+L + LP + I +Q++
Sbjct: 116 GIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMI------------ILALQEE 163
Query: 148 VM-------GLTALGI-PAHKLTSTTSKEDEKFIYKALEKGEGELK-------------- 185
+M G AL I P+ +L T E+F+ +E G L+
Sbjct: 164 IMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQL 223
Query: 186 --------ILYVTPEKISK--SKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDY 235
I+ TP ++ +K+ MS ++ C L+++DEA G F D
Sbjct: 224 DVVKKGVHIVVATPGRLKDILAKKKMS-LDACR------LLTLDEADRLVDLG--FEDDI 274
Query: 236 KNL-GILKVQFPNVPMVALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKS 294
+++ K Q + +AT ++Q L P V V NL + + +
Sbjct: 275 RHVFDHFKSQRQTL---LFSATMPAKIQIFATSALVKPVTVN-VGRAGAANLDVIQEVEY 330
Query: 295 SVGKVVIDEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAR 354
+ I + E +Q++ P +++C ++ + + + + L +G+ A H D R
Sbjct: 331 VKQEAKIVYLLECLQKTTPPV---LIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDR 387
Query: 355 EKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
+ + K V+V T G++ PD++ VI++ + +E Y GR GR G
Sbjct: 388 DYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCG 443
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 144/341 (42%), Gaps = 61/341 (17%)
Query: 103 VLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTA----LGI-- 156
+L+GRD++ I G GK+L + LP ++ I+L ++ +M + A +G+
Sbjct: 180 ILAGRDMIGIAFTGSGKTLVFVLPMIM-----------IALQEEMMMPIAAGEGPIGLIV 228
Query: 157 -PAHKLTSTTSKEDEKFIYKALEKGEGELK----------------------ILYVTPEK 193
P+ +L T + E+F+ +E G L+ I+ TP +
Sbjct: 229 CPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGR 288
Query: 194 ISK--SKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGH--DFRPDYKNLGILKVQFPNVP 249
+ +K+ MS ++ C + +++DEA G D R + + K Q +
Sbjct: 289 LKDMLAKKKMS-LDACRY------LTLDEADRLVDLGFEDDIREVFDHF---KSQRQTL- 337
Query: 250 MVALTATATQRVQNDLVEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQ 309
+AT ++Q L P V V NL + + + + I + E +Q
Sbjct: 338 --LFSATMPTKIQIFARSALVKPVTVN-VGRAGAANLDVIQEVEYVKQEAKIVYLLECLQ 394
Query: 310 ESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVI 369
++ P +++C ++ + + + + L +G+ A H D RE + K V+
Sbjct: 395 KTSP---PVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVL 451
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
V T G++ PD++ VI++ + +E Y GR GR G
Sbjct: 452 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG 492
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 41/331 (12%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLR--------DGIALVVSPLISLIQDQ 147
Q E + L+GRD+L G GK+ + +P + + + +V + ++L Q
Sbjct: 158 QEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQ 217
Query: 148 V---MGLTALGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKI-SKSKRFMS 202
V +G L I T TS K+D +Y+ + +L TP +I +K+ +
Sbjct: 218 VCKELG-KHLKIQVMVTTGGTSLKDDIMRLYQPVH-------LLVGTPGRILDLTKKGVC 269
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQ 262
++ C S++ +DEA +F+P ++L + + M + T T +
Sbjct: 270 VLKDC------SVLVMDEAD--KLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDF 321
Query: 263 NDLVEMLHIPRCVKFVSTVNRPNL--FY-MVKEKSSVGKVVIDEIAEFIQESYPNKESGI 319
D L P + + + + FY V+E+ + ++ + +Q + I
Sbjct: 322 KD--RFLTNPYVINLMDELTLKGITQFYAFVEERQKIH--CLNTLFSKLQIN-----QSI 372
Query: 320 VYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGI 379
++C S E +AK++ E G S + HA M + R +V + N + +V T F GI
Sbjct: 373 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 432
Query: 380 NKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
+ V VI+ K+ ETY GR+GR G
Sbjct: 433 DIQAVNVVINFDFPKNAETYLHRVGRSGRFG 463
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 41/331 (12%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLR--------DGIALVVSPLISLIQDQ 147
Q E + L+GRD+L G GK+ + +P + + + +V + ++L Q
Sbjct: 158 QEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQ 217
Query: 148 V---MGLTALGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKI-SKSKRFMS 202
V +G L I T TS K+D +Y+ + +L TP +I +K+ +
Sbjct: 218 VCKELG-KHLKIQVMVTTGGTSLKDDIMRLYQPVH-------LLVGTPGRILDLTKKGVC 269
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQ 262
++ C S++ +DEA +F+P ++L + + M + T T +
Sbjct: 270 VLKDC------SVLVMDEAD--KLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDF 321
Query: 263 NDLVEMLHIPRCVKFVSTVNRPNL--FY-MVKEKSSVGKVVIDEIAEFIQESYPNKESGI 319
D L P + + + + FY V+E+ + ++ + +Q + I
Sbjct: 322 KD--RFLTNPYVINLMDELTLKGITQFYAFVEERQKIH--CLNTLFSKLQIN-----QSI 372
Query: 320 VYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGI 379
++C S E +AK++ E G S + HA M + R +V + N + +V T F GI
Sbjct: 373 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 432
Query: 380 NKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
+ V VI+ K+ ETY GR+GR G
Sbjct: 433 DIQAVNVVINFDFPKNAETYLHRVGRSGRFG 463
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 287 FYMVKEKSSVGKVVIDEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYH 346
Y + S+ + ++ ++ Y IV+ ++++ ++V+ L I+ + H
Sbjct: 234 LYAIATTSTSKRTILSDLITV----YAKGGKTIVFTQTKRDADEVSLAL-SNSIATEALH 288
Query: 347 ADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 406
D+ + RE+ + K V+V T G++ P+V VIH+ L ET+ SGR
Sbjct: 289 GDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 348
Query: 407 GRDGLPSECVL 417
GR G +L
Sbjct: 349 GRAGKEGSAIL 359
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 287 FYMVKEKSSVGKVVIDEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYH 346
Y + S+ + ++ ++ Y IV+ ++++ ++V+ L I+ + H
Sbjct: 327 LYAIATTSTSKRTILSDLITV----YAKGGKTIVFTQTKRDADEVSLAL-SNSIATEALH 381
Query: 347 ADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 406
D+ + RE+ + K V+V T G++ P+V VIH+ L ET+ SGR
Sbjct: 382 GDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 441
Query: 407 GRDGLPSECVL 417
GR G +L
Sbjct: 442 GRAGKEGSAIL 452
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 287 FYMVKEKSSVGKVVIDEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYH 346
Y + S+ + ++ ++ Y IV+ ++++ ++V+ L I+ + H
Sbjct: 327 LYAIATTSTSKRTILSDLITV----YAKGGKTIVFTQTKRDADEVSLAL-SNSIATEALH 381
Query: 347 ADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 406
D+ + RE+ + K V+V T G++ P+V VIH+ L ET+ SGR
Sbjct: 382 GDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 441
Query: 407 GRDGLPSECVL 417
GR G +L
Sbjct: 442 GRAGKEGSAIL 452
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 289 MVKEKSSVGKV--VIDEIAEFIQESYPNKESGIVYCFSRKECEQVAKELRERGISADHYH 346
M+KE ++ ++DE+ E ++ IV+ ++K C+ +AK L + G H
Sbjct: 557 MMKESEKFFRLQKLLDELGE---------KTAIVFVNTKKNCDSIAKNLDKAGYRVTTLH 607
Query: 347 ADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 406
RE + + V+V T G GI+ PDV VI++ + K +E Y GR
Sbjct: 608 GGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRT 667
Query: 407 GRDG 410
GR G
Sbjct: 668 GRAG 671
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 49/335 (14%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALG 155
Q E + L+G D+L G GK+ + +P + + + P ++IQ ++
Sbjct: 151 QEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK------IDPNNNVIQAMIL------ 198
Query: 156 IPAHKL---TSTTSKEDEKF--IYKALEKGEGELK-----------ILYVTPEKI-SKSK 198
+P +L TS KE K+ I + G L+ +L TP +I +K
Sbjct: 199 VPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTK 258
Query: 199 RFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATAT 258
+ + ++ C +++ +DEA +F+P + L Q M + T T
Sbjct: 259 KGVCVLKDC------AMLVMDEAD--KLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVT 310
Query: 259 QRVQNDLVEMLHIPRCVKF---VSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNK 315
+ D L P + ++ + + V+E+ V ++ + +Q +
Sbjct: 311 VKAFKD--RHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVH--CLNTLFSKLQIN---- 362
Query: 316 ESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAF 375
I++C S E +AK++ E G S + HA M + R +V + N + +V T F
Sbjct: 363 -QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLF 421
Query: 376 GMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
GI+ V VI+ ++ E+Y GR+GR G
Sbjct: 422 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFG 456
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 49/335 (14%)
Query: 96 QREIVNAVLSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVVSPLISLIQDQVMGLTALG 155
Q E + L+G D+L G GK+ + +P + + + P ++IQ ++
Sbjct: 151 QEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK------IDPNNNVIQAMIL------ 198
Query: 156 IPAHKL---TSTTSKEDEKF--IYKALEKGEGELK-----------ILYVTPEKI-SKSK 198
+P +L TS KE K+ I + G L+ +L TP +I +K
Sbjct: 199 VPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTK 258
Query: 199 RFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATAT 258
+ + ++ C +++ +DEA +F+P + L Q M + T T
Sbjct: 259 KGVCVLKDC------AMLVMDEAD--KLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVT 310
Query: 259 QRVQNDLVEMLHIPRCVKF---VSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNK 315
+ D L P + ++ + + V+E+ V ++ + +Q +
Sbjct: 311 VKAFKD--RHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVH--CLNTLFSKLQIN---- 362
Query: 316 ESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAF 375
I++C S E +AK++ E G S + HA M + R +V + N + +V T F
Sbjct: 363 -QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLF 421
Query: 376 GMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
GI+ V VI+ ++ E+Y GR+GR G
Sbjct: 422 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFG 456
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 137/340 (40%), Gaps = 54/340 (15%)
Query: 94 VNQREIVNAVLSGRDVLVIMAAGGGKSLCY------QLPAVLRDGIALVVSPLISLIQDQ 147
+ QR IV G DV+ +G GK+ + QL L ALV++P L Q
Sbjct: 60 IQQRGIV-PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQI 118
Query: 148 VMGLTALG----IPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMS 202
+ ALG + H TS +ED++ + + + ++ TP ++ R S
Sbjct: 119 EKVMRALGDYQGVKVHACVGGTSVREDQRIL-------QAGVHVVVGTPGRVFDMLRRQS 171
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQ 262
C + + +DEA G F+ + I ++ P + + +AT
Sbjct: 172 LRPDC-----IKMFVLDEADEMLSRG--FKDQIYD--IFQLLPPKIQVGVFSATMPP--- 219
Query: 263 NDLVEMLHIPRCVKFVS-----TVNRPNL-------FYMVKEKSSVGKVVIDEIAEFIQE 310
E L I R KF+S V R L FY+ EK + ++ E +
Sbjct: 220 ----EALEITR--KFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAI 273
Query: 311 SYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIV 370
+ +++ +R++ + + ++R R + H DMD N R+ + + + +V++
Sbjct: 274 T-----QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 328
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
T GI+ V VI+ L E Y GR+GR G
Sbjct: 329 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 368
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 137/340 (40%), Gaps = 54/340 (15%)
Query: 94 VNQREIVNAVLSGRDVLVIMAAGGGKSLCY------QLPAVLRDGIALVVSPLISLIQDQ 147
+ QR IV G DV+ +G GK+ + QL L ALV++P L Q
Sbjct: 65 IQQRGIV-PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQI 123
Query: 148 VMGLTALG----IPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMS 202
+ ALG + H TS +ED++ + + + ++ TP ++ R S
Sbjct: 124 EKVMRALGDYQGVKVHACVGGTSVREDQRIL-------QAGVHVVVGTPGRVFDMLRRQS 176
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQ 262
C + + +DEA G F+ + I ++ P + + +AT
Sbjct: 177 LRPDC-----IKMFVLDEADEMLSRG--FKDQIYD--IFQLLPPKIQVGVFSATMPP--- 224
Query: 263 NDLVEMLHIPRCVKFVS-----TVNRPNL-------FYMVKEKSSVGKVVIDEIAEFIQE 310
E L I R KF+S V R L FY+ EK + ++ E +
Sbjct: 225 ----EALEITR--KFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAI 278
Query: 311 SYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIV 370
+ +++ +R++ + + ++R R + H DMD N R+ + + + +V++
Sbjct: 279 T-----QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
T GI+ V VI+ L E Y GR+GR G
Sbjct: 334 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 373
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
I++C S E +AK++ E G S + HA M + R +V + N + +V T F G
Sbjct: 395 IIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRG 454
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
I+ V VI+ ++ E+Y GR+GR G
Sbjct: 455 IDIQAVNVVINFDFPRTSESYLHRVGRSGRFG 486
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 155/385 (40%), Gaps = 55/385 (14%)
Query: 64 TTVENWNGPFQWDSEADDLRLNIF------GISSYRVNQREIVNAVLSGRDVLVIMAAGG 117
TT EN P+ E+ L I G S Q + L RD++ I G
Sbjct: 425 TTGENIPAPY-ITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGS 483
Query: 118 GKSLCYQLPAVL---------RDG-IALVVSP---LISLIQDQVMGLTALGIPAHKLTST 164
GK+L Y +PA + R+G L+++P L + IQD+ +
Sbjct: 484 GKTLGYLIPAFILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRF-----------GR 532
Query: 165 TSKEDEKFIYKALEKG------EGELKILYVTPEKISKSKRFMSKIEKCHHAGRLSLISI 218
+S+ +Y KG E I+ TP +++ M I+ ++SL+ +
Sbjct: 533 SSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILE-MKMID----FQQVSLLVL 587
Query: 219 DEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQNDLVEMLHIPRCVKFV 278
DEA G F P + I+ P + TAT + V+ ++L P V
Sbjct: 588 DEADRMLDMG--FEPQIRK--IVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVN-- 641
Query: 279 STVNRPNLFYMVKEKSSVGKVVID-EIAEFIQESYPNKESG---IVYCFSRKECEQVAKE 334
+ R + K + +VV E +++ ++E G I++C +++ C+ +A+
Sbjct: 642 --IGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARS 699
Query: 335 LRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSK 394
+ R A H D R+ V ++ + K V++ T G++ D+R VI++
Sbjct: 700 V-GRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPT 758
Query: 395 SMETYYQESGRAGRDGLPSECVLYF 419
+E Y GR GR G +F
Sbjct: 759 GVEDYVHRIGRTGRAGATGVAFTFF 783
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 319 IVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIVGTVAFGMG 378
IV+ ++++ ++++ L R + H D+ + RE+ + + ++V T G
Sbjct: 353 IVFTQTKRDADRLSYAL-ARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARG 411
Query: 379 INKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF 419
++ P+V +IH+ L + ET+ +GR GR G +L +
Sbjct: 412 LDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIY 452
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 54/340 (15%)
Query: 94 VNQREIVNAVLSGRDVLVIMAAGGGKSLCY------QLPAVLRDGIALVVSPLISLIQ-- 145
+ QR IV G DV+ +G GK+ + QL L ALV++P L Q
Sbjct: 60 IQQRGIV-PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQI 118
Query: 146 DQVMGLTA--LGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMS 202
++VM LG+ H TS +ED++ + + + ++ TP ++ F
Sbjct: 119 EKVMRALGDYLGVKVHACVGGTSVREDQRIL-------QAGVHVVVGTPGRV-----FDM 166
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQ 262
+ A + + +DEA G F+ + I ++ P + + +AT
Sbjct: 167 LKRQSLRADNIKMFVLDEADEMLSRG--FKDQIYD--IFQLLPPKIQVGVFSATMPP--- 219
Query: 263 NDLVEMLHIPRCVKFVS-----TVNRPNL-------FYMVKEKSSVGKVVIDEIAEFIQE 310
E L I R KF+S V R L FY+ EK + ++ E +
Sbjct: 220 ----EALEITR--KFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 273
Query: 311 SYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIV 370
+ +++ +R++ + + ++R R + H DMD N R+ + + + +V++
Sbjct: 274 T-----QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 328
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
T GI+ V VI+ L E Y GR+GR G
Sbjct: 329 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 368
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 54/340 (15%)
Query: 94 VNQREIVNAVLSGRDVLVIMAAGGGKSLCY------QLPAVLRDGIALVVSPLISLIQ-- 145
+ QR IV G DV+ +G GK+ + QL L ALV++P L Q
Sbjct: 65 IQQRGIV-PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQI 123
Query: 146 DQVMGLTA--LGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMS 202
++VM LG+ H TS +ED++ + + + ++ TP ++ F
Sbjct: 124 EKVMRALGDYLGVKVHACVGGTSVREDQRIL-------QAGVHVVVGTPGRV-----FDM 171
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQ 262
+ A + + +DEA G F+ + I ++ P + + +AT
Sbjct: 172 LKRQSLRADNIKMFVLDEADEMLSRG--FKDQIYD--IFQLLPPKIQVGVFSATMPP--- 224
Query: 263 NDLVEMLHIPRCVKFVS-----TVNRPNL-------FYMVKEKSSVGKVVIDEIAEFIQE 310
E L I R KF+S V R L FY+ EK + ++ E +
Sbjct: 225 ----EALEITR--KFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 278
Query: 311 SYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIV 370
+ +++ +R++ + + ++R R + H DMD N R+ + + + +V++
Sbjct: 279 T-----QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
T GI+ V VI+ L E Y GR+GR G
Sbjct: 334 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 373
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 138/340 (40%), Gaps = 54/340 (15%)
Query: 94 VNQREIVNAVLSGRDVLVIMAAGGGKSLCY------QLPAVLRDGIALVVSPLISLIQ-- 145
+ QR IV G DV+ +G GK+ + QL L ALV++P L Q
Sbjct: 65 IQQRGIV-PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQI 123
Query: 146 DQVMGLTA--LGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMS 202
++VM LG+ H TS +ED++ + + + ++ TP ++ F
Sbjct: 124 EKVMRALGDYLGVKVHACVGGTSVREDQRIL-------QAGVHVVVGTPGRV-----FDM 171
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQ 262
+ A + + +DEA F+ + I ++ P + + +AT
Sbjct: 172 LKRQSLRADNIKMFVLDEAD--EMLSRGFKDQIYD--IFQLLPPKIQVGVFSATMPP--- 224
Query: 263 NDLVEMLHIPRCVKFVS-----TVNRPNL-------FYMVKEKSSVGKVVIDEIAEFIQE 310
E L I R KF+S V R L FY+ EK + ++ E +
Sbjct: 225 ----EALEITR--KFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 278
Query: 311 SYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIV 370
+ +++ +R++ + + ++R R + H DMD N R+ + + + +V++
Sbjct: 279 T-----QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
T GI+ V VI+ L E Y GR+GR G
Sbjct: 334 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 373
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 54/340 (15%)
Query: 94 VNQREIVNAVLSGRDVLVIMAAGGGKSLCY------QLPAVLRDGIALVVSPLISLIQ-- 145
+ QR IV G DV+ +G GK+ + QL L ALV++P L Q
Sbjct: 55 IQQRGIV-PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQI 113
Query: 146 DQVMGLTA--LGIPAHKLTSTTS-KEDEKFIYKALEKGEGELKILYVTPEKISKSKRFMS 202
++VM LG+ H TS +ED++ + + + ++ TP ++ F
Sbjct: 114 EKVMRALGDYLGVKVHACVGGTSVREDQRIL-------QAGVHVVVGTPGRV-----FDM 161
Query: 203 KIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTATATQRVQ 262
+ A + + +DEA G F+ + I ++ P + + +AT
Sbjct: 162 LKRQSLRADNIKMFVLDEADEMLSRG--FKDQIYD--IFQLLPPKIQVGVFSATMPP--- 214
Query: 263 NDLVEMLHIPRCVKFVS-----TVNRPNL-------FYMVKEKSSVGKVVIDEIAEFIQE 310
E L I R KF+S V R L FY+ EK + ++ E +
Sbjct: 215 ----EALEITR--KFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 268
Query: 311 SYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVIV 370
+ +++ +R++ + + ++R R + H DMD N R+ + + + +V++
Sbjct: 269 T-----QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 323
Query: 371 GTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDG 410
T GI+ V VI+ L E Y GR+GR G
Sbjct: 324 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 363
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 146/354 (41%), Gaps = 41/354 (11%)
Query: 87 FGISSYRVNQREIVNAVLSGRDVLVIMAAGGGK------SLCYQLPAVLRDGIALVVSPL 140
+G Q+ V +L GRDV+ +G GK S+C + R+ AL++SP
Sbjct: 53 YGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPT 112
Query: 141 ISLIQDQVMGLTALG----IPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTPEKISK 196
L + A+G I AH S ++ + LE G + ++ TP ++
Sbjct: 113 RELATQTEKTIQAIGLHANIQAHACIGGNSVGED---IRKLEHG---VHVVSGTPGRVCD 166
Query: 197 SKRFMSKIEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKVQFPNVPMVALTAT 256
+ + + L+ +DE+ G F+ + + + P++ + ++AT
Sbjct: 167 MIK-----RRSLRTRAIKLLILDESDEMLSRG--FKDQIYD--VYRYLPPDLQVCLVSAT 217
Query: 257 ATQRVQNDLVEMLHIPRCVKFVSTVNRPNL-------FYMVKEKSSVGKVVIDEIAEFIQ 309
+ + + P VK + V R L F++ EK + ++ + +
Sbjct: 218 LPHEILEMTSKFMTEP--VKIL--VKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLT 273
Query: 310 ESYPNKESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNAREKVHMRWSNNKLQVI 369
+ +++C ++++ + +++++R + H DM R+ + + + +V+
Sbjct: 274 IT-----QAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVL 328
Query: 370 VGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFRPGD 423
+ T + GI+ V VI++ L + E Y GR+GR G + + + D
Sbjct: 329 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 382
>AT5G08110.1 | Symbols: | nucleic acid binding;ATP-dependent
helicases;ATP binding;helicases;ATP-dependent helicases
| chr5:2594854-2600114 REVERSE LENGTH=1141
Length = 1141
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 77 SEADDLRLNIFGISSYRVNQREIVNAVLSGRDVLVIMAAGGGKSLCYQLPA---VLRD-- 131
SE L G+++ +Q E ++A L+G++V V GKSLCY +P + +D
Sbjct: 379 SETTKSALKRIGLNTLYSHQAEAISAALAGKNVAVATMTSSGKSLCYNVPVFEELCKDTN 438
Query: 132 GIALVVSPLISLIQDQVMGLTALGIPAHKLTSTTSKEDEKFIYKALEKGEGELKILYVTP 191
AL + P +L QDQ+ L+ L I + + D YK + ++L P
Sbjct: 439 SCALYLFPTKALAQDQLRALSDL-IKGFEASINMGVYDGDTPYKDRTRLRSNARLLITNP 497
Query: 192 EKISKSKRFMSKIEKCHHAGRLSLISIDEAH 222
+ + S K + L I IDEAH
Sbjct: 498 DMLHISILRRHKEQFSRILSNLRYIVIDEAH 528