Miyakogusa Predicted Gene

Lj2g3v1549840.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1549840.1 tr|B9GZX8|B9GZX8_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_415063 PE=4,70,5e-17,
,CUFF.37494.1
         (288 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23640.2 | Symbols: HGL1 | heteroglycan glucosidase 1 | chr3:...   403   e-113
AT3G23640.1 | Symbols: HGL1 | heteroglycan glucosidase 1 | chr3:...   403   e-113

>AT3G23640.2 | Symbols: HGL1 | heteroglycan glucosidase 1 |
           chr3:8502355-8509358 FORWARD LENGTH=991
          Length = 991

 Score =  403 bits (1036), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 187/284 (65%), Positives = 234/284 (82%)

Query: 1   MDGEVVQIILPSEEDVLNLVSSSEKHCKEQLEKAIQIPDVEEVSGPKGIELSRTPIELKS 60
           MDGE + I +PSE  +  L+S+S +  K  +E    IP+ E V G KG+ELS+ P+EL S
Sbjct: 704 MDGEFIHIKVPSESGISELISTSNERFKLHMENTKLIPEKEVVPGQKGMELSKEPVELSS 763

Query: 61  SEWILKVVPWIGGRIISMIHTPSGTQWLHSRIDISGYEEYSGTEYRSAGCSEEYSVIDRE 120
            +W L +VPW+GGRI+SM H PSG QWLHSRIDI+GYEEYSGTEYRSAGC+EEY+VI+R+
Sbjct: 764 GDWKLNIVPWVGGRILSMTHVPSGIQWLHSRIDINGYEEYSGTEYRSAGCTEEYNVIERD 823

Query: 121 LEHAGEEESVLLEGDIGGGLVLQRKIYFPENAANVIQIDSNIIAHSVGAGSGGFSRLVCL 180
           LEHAGEEES++LEGD+GGGLVL+RKI   ++   V +I S+I A SVGAGSGGFSRLVCL
Sbjct: 824 LEHAGEEESLILEGDVGGGLVLRRKISIAKDNQRVFRIASSIEARSVGAGSGGFSRLVCL 883

Query: 181 RVHPTFCLLHPADSFISFTSIDGSTHEVFPDGGEQIFEGSLIPNGEWRLIDKCLGFALVN 240
           RVHPTF LLHP +SF+SFTSIDGS HEV+PD G+QI+EG+ +P+G+W L+DK L   +VN
Sbjct: 884 RVHPTFTLLHPTESFVSFTSIDGSKHEVWPDSGDQIYEGNNLPHGKWMLVDKSLNLRMVN 943

Query: 241 RFNVTEVFKCLVHWDCGTVNLELWSESRPVSKESPLRISHQYEV 284
           RF+V++VFKC++HWDCGTVNLELWS+ RPVSKESPL+I H+YEV
Sbjct: 944 RFDVSQVFKCIIHWDCGTVNLELWSKERPVSKESPLKIEHEYEV 987


>AT3G23640.1 | Symbols: HGL1 | heteroglycan glucosidase 1 |
           chr3:8502355-8509358 FORWARD LENGTH=991
          Length = 991

 Score =  403 bits (1036), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 187/284 (65%), Positives = 234/284 (82%)

Query: 1   MDGEVVQIILPSEEDVLNLVSSSEKHCKEQLEKAIQIPDVEEVSGPKGIELSRTPIELKS 60
           MDGE + I +PSE  +  L+S+S +  K  +E    IP+ E V G KG+ELS+ P+EL S
Sbjct: 704 MDGEFIHIKVPSESGISELISTSNERFKLHMENTKLIPEKEVVPGQKGMELSKEPVELSS 763

Query: 61  SEWILKVVPWIGGRIISMIHTPSGTQWLHSRIDISGYEEYSGTEYRSAGCSEEYSVIDRE 120
            +W L +VPW+GGRI+SM H PSG QWLHSRIDI+GYEEYSGTEYRSAGC+EEY+VI+R+
Sbjct: 764 GDWKLNIVPWVGGRILSMTHVPSGIQWLHSRIDINGYEEYSGTEYRSAGCTEEYNVIERD 823

Query: 121 LEHAGEEESVLLEGDIGGGLVLQRKIYFPENAANVIQIDSNIIAHSVGAGSGGFSRLVCL 180
           LEHAGEEES++LEGD+GGGLVL+RKI   ++   V +I S+I A SVGAGSGGFSRLVCL
Sbjct: 824 LEHAGEEESLILEGDVGGGLVLRRKISIAKDNQRVFRIASSIEARSVGAGSGGFSRLVCL 883

Query: 181 RVHPTFCLLHPADSFISFTSIDGSTHEVFPDGGEQIFEGSLIPNGEWRLIDKCLGFALVN 240
           RVHPTF LLHP +SF+SFTSIDGS HEV+PD G+QI+EG+ +P+G+W L+DK L   +VN
Sbjct: 884 RVHPTFTLLHPTESFVSFTSIDGSKHEVWPDSGDQIYEGNNLPHGKWMLVDKSLNLRMVN 943

Query: 241 RFNVTEVFKCLVHWDCGTVNLELWSESRPVSKESPLRISHQYEV 284
           RF+V++VFKC++HWDCGTVNLELWS+ RPVSKESPL+I H+YEV
Sbjct: 944 RFDVSQVFKCIIHWDCGTVNLELWSKERPVSKESPLKIEHEYEV 987