Miyakogusa Predicted Gene

Lj2g3v1548420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1548420.1 tr|J0ZIW0|J0ZIW0_9RHIZ 3-demethylubiquinone-9
3-methyltransferase OS=Bartonella melophagi K-2C
GN=ub,49.35,2e-19,SUBFAMILY NOT NAMED,NULL;
HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE,Ubiquinone biosynthesis
O-me,CUFF.37358.1
         (103 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30920.1 | Symbols: ATCOQ3, EMB3002, COQ3 | coenzyme Q 3 | ch...   134   9e-33

>AT2G30920.1 | Symbols: ATCOQ3, EMB3002, COQ3 | coenzyme Q 3 |
           chr2:13157409-13159824 REVERSE LENGTH=322
          Length = 322

 Score =  134 bits (338), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 58/72 (80%), Positives = 64/72 (88%)

Query: 32  LNRNELAKFAAIAETWWDSEGPFKPLHVMNPTRLAFIRSVLCRHFKKDPCSAKPLEGLKI 91
           LN +ELAKF+AIA+TWW SEGPFKPLH MNPTRLAFIRS LCRHF KDP SAKP EGLK 
Sbjct: 76  LNEDELAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKDPSSAKPFEGLKF 135

Query: 92  VDVGCGGGILSE 103
           +D+GCGGG+LSE
Sbjct: 136 IDIGCGGGLLSE 147