Miyakogusa Predicted Gene

Lj2g3v1536250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1536250.1 tr|I1J4L6|I1J4L6_SOYBN Phosphoribulokinase
OS=Glycine max PE=3
SV=1,89.22,0,PHOSPHORIBULOKINASE,Phosphoribulokinase; no
description,NULL; PHRIBLKINASE,Phosphoribulokinase; PRK,,CUFF.37383.1
         (407 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32060.1 | Symbols: PRK | phosphoribulokinase | chr1:11532668...   681   0.0  
AT3G27440.1 | Symbols: UKL5 | uridine kinase-like 5 | chr3:10155...    84   2e-16
AT1G55810.3 | Symbols: UKL3 | uridine kinase-like 3 | chr1:20861...    78   1e-14
AT1G55810.1 | Symbols: UKL3 | uridine kinase-like 3 | chr1:20861...    78   1e-14
AT1G55810.2 | Symbols: UKL3 | uridine kinase-like 3 | chr1:20861...    77   2e-14
AT3G27190.1 | Symbols: UKL2 | uridine kinase-like 2 | chr3:10039...    73   3e-13
AT5G40870.1 | Symbols: ATUK/UPRT1, UKL1, UK/UPRT1 | uridine kina...    71   1e-12
AT4G26510.2 | Symbols: UKL4 | uridine kinase-like 4 | chr4:13384...    69   4e-12
AT4G26510.1 | Symbols: UKL4 | uridine kinase-like 4 | chr4:13384...    69   4e-12
AT1G26190.1 | Symbols:  | Phosphoribulokinase / Uridine kinase f...    62   6e-10
AT1G73980.1 | Symbols:  | Phosphoribulokinase / Uridine kinase f...    55   9e-08

>AT1G32060.1 | Symbols: PRK | phosphoribulokinase |
           chr1:11532668-11534406 FORWARD LENGTH=395
          Length = 395

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/409 (81%), Positives = 365/409 (89%), Gaps = 16/409 (3%)

Query: 1   MAAFTVYSTQSLRSNCSIATPSKSHVGFHQKQQLVFYKRGSDSTSTSRRY--VITCAGGD 58
           MA  T+YSTQ+L S   + + S S       +Q+  Y+R      T+RR+  +ITCA   
Sbjct: 1   MAVSTIYSTQALNSTHFLTSSSSS-------KQVFLYRR---QPQTNRRFNTLITCA--- 47

Query: 59  QQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSL 118
           Q+TIVIGLAADSGCGKSTFMRRLTSVFGGAA+PPKGGNPDSNTLISDTTTVICLDDYHSL
Sbjct: 48  QETIVIGLAADSGCGKSTFMRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVICLDDYHSL 107

Query: 119 DRTGRKEKGVTALDPKANDFDLMYEQVKAIKEGISVQKPIYNHVTGLLDPPELIKPPKIL 178
           DR GRKE+ VTALDP+ANDFDLMYEQVKA+K GI+V+KPIYNHVTGLLDPPELI+PPKIL
Sbjct: 108 DRYGRKEQKVTALDPRANDFDLMYEQVKALKNGIAVEKPIYNHVTGLLDPPELIQPPKIL 167

Query: 179 VIEGLHPMYDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDF 238
           VIEGLHPM+D RVR+LLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDF
Sbjct: 168 VIEGLHPMFDERVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDF 227

Query: 239 DAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTISWI 298
           DA+IDPQKQYADAVIEVLPT LIPDDNEGK+LRVRLI KEGVKYFSPVYLFD+GSTISWI
Sbjct: 228 DAFIDPQKQYADAVIEVLPTTLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTISWI 287

Query: 299 PCGRKLTCSYPGIKFFYGPDTYYGSEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEV 358
           PCGRKLTCSYPGIKF Y PD+Y+  EVSV+EMDGQFDRLDELIYVESHLSNLS+KFYGEV
Sbjct: 288 PCGRKLTCSYPGIKFNYEPDSYFDHEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEV 347

Query: 359 TQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQILASRAETPVGAAKA 407
           TQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQ++A++A T    AKA
Sbjct: 348 TQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQLIANKA-TARAEAKA 395


>AT3G27440.1 | Symbols: UKL5 | uridine kinase-like 5 |
           chr3:10155555-10157931 FORWARD LENGTH=465
          Length = 465

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 113/236 (47%), Gaps = 23/236 (9%)

Query: 59  QQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD--YH 116
           +Q  VIG+A  +  GK+T    + S                   + D   V+   D  YH
Sbjct: 27  KQPFVIGVAGGTASGKTTVCNMIMS------------------QLHDQRVVLVNQDSFYH 68

Query: 117 SLDRTGRKEKGVTALD-PKANDFDLMYEQVKAIKEGISVQKPIYN-HVTGLLDPPELIKP 174
           SL +    +      D P A + +++   ++ ++ G  V  P Y+  +   ++    + P
Sbjct: 69  SLTKEKLNKVHEYNFDHPDAFNTEVLLSCMEKLRSGQPVNIPSYDFKIHQSIESSSPVNP 128

Query: 175 PKILVIEGLHPMYDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESI-KASIEA 233
             ++++EG+  + DPRVR+L++  I++D   +V+ + +IQRD  ERG +++++ +   + 
Sbjct: 129 GDVIILEGILVLNDPRVRDLMNMKIFVDTDADVRLSRRIQRDTVERGRNIQNVLEQYTKF 188

Query: 234 RKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLF 289
            KP FD YI P  +YAD +I       +  D   + +R +L Q    K +S +++ 
Sbjct: 189 VKPSFDEYIQPSMKYADIIIPRGGDNDVAIDLIVQHIRTKLCQHNLCKIYSNIFII 244


>AT1G55810.3 | Symbols: UKL3 | uridine kinase-like 3 |
           chr1:20861273-20864003 FORWARD LENGTH=466
          Length = 466

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 35/243 (14%)

Query: 18  IATPSKSHV-GFHQKQQLVFYKRGSDSTSTSRRYVITCAGGDQQTIVIGLAADSGCGKST 76
           I T SK H  GFHQ           D  +++R   +       Q  VIG+A  +  GK+T
Sbjct: 10  IETSSKVHFSGFHQ----------MDGLASNRPEQMAEEEEHGQPFVIGVAGGAASGKTT 59

Query: 77  FMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD--YHSLDRTGRKEKGVTALD-P 133
               +                     + D   V+   D  YH+++            D P
Sbjct: 60  VCDMIMQ------------------QLHDQRAVVVNQDSFYHNVNEVELVRVHDYNFDHP 101

Query: 134 KANDFDLMYEQVKAIKEGISVQKPIYNHVT--GLLDPPELIKPPKILVIEGLHPMYDPRV 191
            A D + +   ++ +++G +V  P Y+  +    + PP  + P  ++++EG+   +DPRV
Sbjct: 102 DAFDTEQLLSSMEKLRKGQAVDIPNYDFKSYKNNVFPPRRVNPSDVIILEGILIFHDPRV 161

Query: 192 RELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYAD 250
           R+L++  I++D   +V+ A +I+RD  E+G  + ++        KP F+ +I P K+YAD
Sbjct: 162 RDLMNMKIFVDADADVRLARRIKRDTVEKGRDIATVLDQYSKFVKPAFEDFILPTKKYAD 221

Query: 251 AVI 253
            +I
Sbjct: 222 III 224


>AT1G55810.1 | Symbols: UKL3 | uridine kinase-like 3 |
           chr1:20861273-20864003 FORWARD LENGTH=466
          Length = 466

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 35/243 (14%)

Query: 18  IATPSKSHV-GFHQKQQLVFYKRGSDSTSTSRRYVITCAGGDQQTIVIGLAADSGCGKST 76
           I T SK H  GFHQ           D  +++R   +       Q  VIG+A  +  GK+T
Sbjct: 10  IETSSKVHFSGFHQ----------MDGLASNRPEQMAEEEEHGQPFVIGVAGGAASGKTT 59

Query: 77  FMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD--YHSLDRTGRKEKGVTALD-P 133
               +                     + D   V+   D  YH+++            D P
Sbjct: 60  VCDMIMQ------------------QLHDQRAVVVNQDSFYHNVNEVELVRVHDYNFDHP 101

Query: 134 KANDFDLMYEQVKAIKEGISVQKPIYNHVT--GLLDPPELIKPPKILVIEGLHPMYDPRV 191
            A D + +   ++ +++G +V  P Y+  +    + PP  + P  ++++EG+   +DPRV
Sbjct: 102 DAFDTEQLLSSMEKLRKGQAVDIPNYDFKSYKNNVFPPRRVNPSDVIILEGILIFHDPRV 161

Query: 192 RELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYAD 250
           R+L++  I++D   +V+ A +I+RD  E+G  + ++        KP F+ +I P K+YAD
Sbjct: 162 RDLMNMKIFVDADADVRLARRIKRDTVEKGRDIATVLDQYSKFVKPAFEDFILPTKKYAD 221

Query: 251 AVI 253
            +I
Sbjct: 222 III 224


>AT1G55810.2 | Symbols: UKL3 | uridine kinase-like 3 |
           chr1:20861273-20864003 FORWARD LENGTH=461
          Length = 461

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 35/243 (14%)

Query: 18  IATPSKSHV-GFHQKQQLVFYKRGSDSTSTSRRYVITCAGGDQQTIVIGLAADSGCGKST 76
           I T SK H  GFHQ           D  +++R   +       Q  VIG+A  +  GK+T
Sbjct: 10  IETSSKVHFSGFHQM----------DGLASNRPEQMAEEEEHGQPFVIGVAGGAASGKTT 59

Query: 77  FMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD--YHSLDRTGRKEKGVTALD-P 133
               +                     + D   V+   D  YH+++            D P
Sbjct: 60  VCDMIMQ------------------QLHDQRAVVVNQDSFYHNVNEVELVRVHDYNFDHP 101

Query: 134 KANDFDLMYEQVKAIKEGISVQKPIYNHVT--GLLDPPELIKPPKILVIEGLHPMYDPRV 191
            A D + +   ++ +++G +V  P Y+  +    + PP  + P  ++++EG+   +DPRV
Sbjct: 102 DAFDTEQLLSSMEKLRKGQAVDIPNYDFKSYKNNVFPPRRVNPSDVIILEGILIFHDPRV 161

Query: 192 RELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYAD 250
           R+L++  I++D   +V+ A +I+RD  E+G  + ++        KP F+ +I P K+YAD
Sbjct: 162 RDLMNMKIFVDADADVRLARRIKRDTVEKGRDIATVLDQYSKFVKPAFEDFILPTKKYAD 221

Query: 251 AVI 253
            +I
Sbjct: 222 III 224


>AT3G27190.1 | Symbols: UKL2 | uridine kinase-like 2 |
           chr3:10039504-10042917 REVERSE LENGTH=483
          Length = 483

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 3/124 (2%)

Query: 133 PKANDFDLMYEQVKAIKEGISVQKPIYNHVTGL--LDPPELIKPPKILVIEGLHPMYDPR 190
           P A D + +   V  +K G   Q PIY+  T    +D    +    ++++EG+   +D R
Sbjct: 119 PDAFDTEQLLHCVDILKSGQPYQIPIYDFKTHQRKVDAFRQVNACDVIILEGILVFHDSR 178

Query: 191 VRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESI-KASIEARKPDFDAYIDPQKQYA 249
           VR+L++  I++D   +V+ A +I+RD  ERG  ++S+ +   +  KP FD ++ P K+YA
Sbjct: 179 VRDLMNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYA 238

Query: 250 DAVI 253
           D +I
Sbjct: 239 DVII 242


>AT5G40870.1 | Symbols: ATUK/UPRT1, UKL1, UK/UPRT1 | uridine
           kinase/uracil phosphoribosyltransferase 1 |
           chr5:16375021-16378384 FORWARD LENGTH=486
          Length = 486

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 3/159 (1%)

Query: 133 PKANDFDLMYEQVKAIKEGISVQKPIYNHVTGLL--DPPELIKPPKILVIEGLHPMYDPR 190
           P A D + +    + +K G   Q PIY+  T     D    +    ++++EG+   +D R
Sbjct: 119 PDAFDTEQLLHCAETLKSGQPYQVPIYDFKTHQRRSDTFRQVNASDVIILEGILVFHDSR 178

Query: 191 VRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESI-KASIEARKPDFDAYIDPQKQYA 249
           VR L++  I++D   +V+ A +I+RD  ERG  + S+ +   +  KP FD ++ P K+YA
Sbjct: 179 VRNLMNMKIFVDTDADVRLARRIRRDTVERGRDVNSVLEQYAKFVKPAFDDFVLPSKKYA 238

Query: 250 DAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYL 288
           D +I       +  D   + +  +L Q +  K +  VY+
Sbjct: 239 DVIIPRGGDNHVAVDLITQHIHTKLGQHDLCKIYPNVYV 277


>AT4G26510.2 | Symbols: UKL4 | uridine kinase-like 4 |
           chr4:13384503-13387920 FORWARD LENGTH=469
          Length = 469

 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 20/198 (10%)

Query: 59  QQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD-YHS 117
           +Q  VIG+A  +  GK+T    +                    L      +I LD  YH+
Sbjct: 47  RQPFVIGVAGGAASGKTTVCDMIIQ-----------------QLHDQRVVLINLDSFYHN 89

Query: 118 LDRTGRKEKGVTALD-PKANDFDLMYEQVKAIKEGISVQKPIYNHVTGLLDPPELIKPPK 176
           L             D P A D + +   ++ +++G +V  P Y+  T        + P  
Sbjct: 90  LTEEELARVHEYNFDHPDAFDTEHLLSCMEKLRQGQAVDIPKYDFKTYRSSVFRRVNPTD 149

Query: 177 ILVIEGLHPMYDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RK 235
           ++++EG+   +DPRVR+L++  I++    +V+ A +I+RD  E G  + ++        K
Sbjct: 150 VIILEGILLFHDPRVRKLMNMKIFVCTDADVRLARRIKRDTVENGRDIGTVLDQYSKFVK 209

Query: 236 PDFDAYIDPQKQYADAVI 253
           P FD +I P K+YAD +I
Sbjct: 210 PAFDDFILPTKKYADIII 227


>AT4G26510.1 | Symbols: UKL4 | uridine kinase-like 4 |
           chr4:13384503-13387920 FORWARD LENGTH=469
          Length = 469

 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 20/198 (10%)

Query: 59  QQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD-YHS 117
           +Q  VIG+A  +  GK+T    +                    L      +I LD  YH+
Sbjct: 47  RQPFVIGVAGGAASGKTTVCDMIIQ-----------------QLHDQRVVLINLDSFYHN 89

Query: 118 LDRTGRKEKGVTALD-PKANDFDLMYEQVKAIKEGISVQKPIYNHVTGLLDPPELIKPPK 176
           L             D P A D + +   ++ +++G +V  P Y+  T        + P  
Sbjct: 90  LTEEELARVHEYNFDHPDAFDTEHLLSCMEKLRQGQAVDIPKYDFKTYRSSVFRRVNPTD 149

Query: 177 ILVIEGLHPMYDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RK 235
           ++++EG+   +DPRVR+L++  I++    +V+ A +I+RD  E G  + ++        K
Sbjct: 150 VIILEGILLFHDPRVRKLMNMKIFVCTDADVRLARRIKRDTVENGRDIGTVLDQYSKFVK 209

Query: 236 PDFDAYIDPQKQYADAVI 253
           P FD +I P K+YAD +I
Sbjct: 210 PAFDDFILPTKKYADIII 227


>AT1G26190.1 | Symbols:  | Phosphoribulokinase / Uridine kinase
           family | chr1:9057285-9060433 REVERSE LENGTH=674
          Length = 674

 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 39/201 (19%)

Query: 62  IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRT 121
           I++G+A  SG GK+ F  ++ +     A                   VI +D+Y+   R 
Sbjct: 66  ILVGVAGPSGAGKTVFTEKILNFLPSVA-------------------VISMDNYNDSSRI 106

Query: 122 --GRKEKGVTALDPKANDFDLMYEQVKAIKEGISVQKPIYNHVTG------LLDPPELIK 173
             G  +      DP+  D+D + + ++ +KEG  V+ PIY+  +        LD P    
Sbjct: 107 VDGNFD------DPRLTDYDTLLKNLEDLKEGKQVEVPIYDFKSSSRVGYRTLDVP---- 156

Query: 174 PPKILVIEGLHPMYDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASI-E 232
           P +I++IEG++ + + ++R LLD  + +          ++ RD+   G   E I   I E
Sbjct: 157 PSRIVIIEGIYALSE-KLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQQPEEIIHQISE 215

Query: 233 ARKPDFDAYIDPQKQYADAVI 253
              P + A+I+P  Q A   I
Sbjct: 216 TVYPMYKAFIEPDLQTAQIKI 236


>AT1G73980.1 | Symbols:  | Phosphoribulokinase / Uridine kinase
           family | chr1:27820292-27823527 REVERSE LENGTH=643
          Length = 643

 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 27/195 (13%)

Query: 62  IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRT 121
           I++GLA  SG GK+ F  ++ +     A                   +I +D+Y+     
Sbjct: 66  ILVGLAGPSGAGKTIFTEKILNFMPSIA-------------------IINMDNYND---- 102

Query: 122 GRKEKGVTALDPKANDFDLMYEQVKAIKEGISVQKPIYNHVTGLLDPPELIKPP--KILV 179
           G +       DP+  D+D + + +  +++G  VQ PIY+  +        ++ P  +I++
Sbjct: 103 GTRVIDGNFDDPRLTDYDTLLDNIHGLRDGKPVQVPIYDFKSSSRIGYRTLEVPSSRIVI 162

Query: 180 IEGLHPMYDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASI-EARKPDF 238
           +EG++ + + ++R LLD  + +          ++ RD+   G   E I   I E   P +
Sbjct: 163 LEGIYALSE-KLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMY 221

Query: 239 DAYIDPQKQYADAVI 253
            A+I+P  + A   I
Sbjct: 222 KAFIEPDLKTAQIKI 236