Miyakogusa Predicted Gene
- Lj2g3v1533000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1533000.1 Non Chatacterized Hit- tr|C6T0N8|C6T0N8_SOYBN
Putative uncharacterized protein (Fragment)
OS=Glycine,40.97,1e-18,seg,NULL; F-box,F-box domain, cyclin-like;
F-BOX FAMILY PROTEIN,NULL; FBOX,F-box domain,
cyclin-like,gene.g41746.t1.1
(390 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14710.1 | Symbols: | RNI-like superfamily protein | chr3:49... 86 6e-17
AT5G56690.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 83 3e-16
AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 78 1e-14
AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 76 5e-14
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 75 6e-14
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 75 6e-14
AT5G38396.1 | Symbols: | F-box/RNI-like superfamily protein | c... 74 2e-13
AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 73 4e-13
AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 72 5e-13
AT3G58930.1 | Symbols: | F-box/RNI-like superfamily protein | c... 72 9e-13
AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein | c... 71 1e-12
AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein | c... 71 1e-12
AT3G49150.1 | Symbols: | F-box/RNI-like superfamily protein | c... 71 1e-12
AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein | c... 71 1e-12
AT3G58940.1 | Symbols: | F-box/RNI-like superfamily protein | c... 70 3e-12
AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein | c... 70 3e-12
AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein | c... 69 8e-12
AT3G59240.1 | Symbols: | RNI-like superfamily protein | chr3:21... 67 2e-11
AT3G59000.1 | Symbols: | F-box/RNI-like superfamily protein | c... 66 3e-11
AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein | c... 65 7e-11
AT3G59000.2 | Symbols: | F-box/RNI-like superfamily protein | c... 65 1e-10
AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein | c... 64 2e-10
AT5G38590.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 63 3e-10
AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein | c... 63 3e-10
AT5G38590.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 63 3e-10
AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 62 6e-10
AT1G13570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 61 1e-09
AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein | c... 60 2e-09
AT4G00320.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 4e-09
AT3G58820.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 5e-09
AT3G58900.4 | Symbols: | F-box/RNI-like superfamily protein | c... 59 6e-09
AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD (Inter... 59 6e-09
AT1G06630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 7e-09
AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 7e-09
AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 8e-09
AT1G06630.3 | Symbols: | F-box/RNI-like superfamily protein | c... 59 8e-09
AT3G58900.3 | Symbols: | F-box/RNI-like superfamily protein | c... 59 8e-09
AT4G27050.4 | Symbols: | F-box/RNI-like superfamily protein | c... 59 8e-09
AT4G27050.3 | Symbols: | F-box/RNI-like superfamily protein | c... 59 8e-09
AT4G27050.2 | Symbols: | F-box/RNI-like superfamily protein | c... 59 8e-09
AT4G27050.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 8e-09
AT3G44810.1 | Symbols: | F-box family protein | chr3:16358496-1... 59 9e-09
AT1G06630.2 | Symbols: | F-box/RNI-like superfamily protein | c... 58 9e-09
AT3G03030.1 | Symbols: | F-box/RNI-like superfamily protein | c... 58 1e-08
AT3G58900.2 | Symbols: | F-box/RNI-like superfamily protein | c... 58 1e-08
AT3G58900.1 | Symbols: | F-box/RNI-like superfamily protein | c... 58 1e-08
AT3G50710.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 58 1e-08
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 58 1e-08
AT5G41630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 2e-08
AT5G38386.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 2e-08
AT1G49610.1 | Symbols: | F-box family protein | chr1:18361679-1... 57 2e-08
AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 3e-08
AT3G62440.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 3e-08
AT1G64540.1 | Symbols: | F-box/FBD-like domains containing prot... 56 3e-08
AT2G42730.2 | Symbols: | F-box family protein | chr2:17789606-1... 56 4e-08
AT3G18150.1 | Symbols: | RNI-like superfamily protein | chr3:62... 56 5e-08
AT3G59250.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 6e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 55 7e-08
AT1G66300.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 7e-08
AT3G59170.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 7e-08
AT3G59230.1 | Symbols: | RNI-like superfamily protein | chr3:21... 55 9e-08
AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 9e-08
AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 1e-07
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 1e-07
AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 1e-07
AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 1e-07
AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 1e-07
AT1G66310.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT3G51530.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT5G22610.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT2G29910.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT5G38390.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT3G59160.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-07
AT1G58310.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-07
AT2G29910.2 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-07
AT5G02930.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-07
AT1G22000.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 52 5e-07
AT5G56560.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 52 6e-07
AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 8e-07
AT5G02910.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 8e-07
AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 8e-07
AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 8e-07
AT1G52650.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 8e-07
AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 9e-07
AT5G02910.2 | Symbols: | F-box/RNI-like superfamily protein | c... 52 1e-06
AT5G56380.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 1e-06
AT1G32020.1 | Symbols: | F-box family protein | chr1:11512552-1... 51 1e-06
AT3G58980.1 | Symbols: | F-box family protein | chr3:21794445-2... 51 1e-06
AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 1e-06
AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein | chr... 51 2e-06
AT4G10410.1 | Symbols: | Leucine-rich repeat (LRR) family prote... 51 2e-06
AT3G03040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-06
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 2e-06
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 2e-06
AT5G56400.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 50 2e-06
AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 2e-06
AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 2e-06
AT2G42720.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 50 2e-06
AT2G26860.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 50 3e-06
AT5G02920.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 3e-06
AT3G58960.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT1G48400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT5G54820.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 4e-06
AT2G26860.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 49 4e-06
AT3G59150.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 5e-06
AT5G44490.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 49 6e-06
AT1G47915.1 | Symbols: | F-box family protein | chr1:17660752-1... 49 7e-06
AT5G62970.1 | Symbols: | Protein with RNI-like/FBD-like domains... 49 7e-06
AT3G42770.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 7e-06
AT3G58950.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 8e-06
AT3G03360.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 9e-06
AT3G58920.1 | Symbols: | F-box/RNI-like superfamily protein | c... 48 9e-06
>AT3G14710.1 | Symbols: | RNI-like superfamily protein |
chr3:4941545-4943055 FORWARD LENGTH=442
Length = 442
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 112/238 (47%), Gaps = 7/238 (2%)
Query: 3 SNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFLS 62
S+L + ++ ILS LPT +AV TSVLSKSW WT ITDLHF+DT + R F
Sbjct: 29 SSLLESVVSIILSQLPTAEAVSTSVLSKSWKNIWTNITDLHFDDTKQRDPSDSR---FTD 85
Query: 63 FVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKLTLSSHSI 122
FV RV+ + ++ L W+S V+ R +++L V + +S S+
Sbjct: 86 FVERVVGDIGSPHISSFYLCSVNTFDETLLFSWLSKVLKRNLQRLVVTCNDLEIISFSSL 145
Query: 123 M-KYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSGKLHLDFPVLRT 181
+ SL +L L + + A L +L L+L F S+ S L L+FPVL T
Sbjct: 146 FPSFVSLVELRLRTKSI-LDISAPAILPNLKFLSLEDARIF-NMSSVSKNLVLNFPVLET 203
Query: 182 YKTTDCTWSPRIKCVTLKAPLLEVVSIKDVRHRLPPSNESHTAMNFCASSLTKFTYKG 239
++ + C R V + +PLL + + P+ + AS L K T+ G
Sbjct: 204 FEASYCRCF-RTDTVIIDSPLLRIFEMFKCTSEHVPNPSQVCKIRVLASKLEKITFCG 260
>AT5G56690.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:22939723-22941099
FORWARD LENGTH=402
Length = 402
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 134/318 (42%), Gaps = 51/318 (16%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYS---NRIVRRN 58
IS LPD ++ IL+FLPTK A+ TSVLSK W + W ++ L ++D + N +
Sbjct: 4 ISGLPDDLLVKILAFLPTKVAISTSVLSKQWRFLWMWLPKLKYDDYDDITDGFNSVSAFQ 63
Query: 59 LFLSFVYRVL-LYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNS--ENKL 115
+ F+ + L L+ +P L W+ V VSR V++L + + N
Sbjct: 64 TYRDFIAKNLPLHRAPIIESLSLGFRCGTLQPEDLKSWVEVAVSRSVRELSILAYYRNNY 123
Query: 116 TLSSHSIMKYKSLEQLVLCVVGCEIKVPTTAC-LSSLTVLNLSGIEFFGGTSNNSGKLHL 174
LSS S+ KSL + L + VP T C L SL L L + + +S ++ L
Sbjct: 124 ALSSSSLYTCKSL--VTLKGFNIRVDVPPTVCLLPSLRTLELKRVRYLN---EDSLRMLL 178
Query: 175 DFPVLRTYKTTDCTWSPRIKCVTLKAPLLEVVSIKDVRHRLPPSNESHTAMNFCASSLTK 234
F P+LE +SI+ RH N++ + SL +
Sbjct: 179 SF-----------------------CPVLEYLSIE--RH----DNDNLRGLVVDVPSLRR 209
Query: 235 F---TYKGCLSPDTIVFDLSAAHIASAYIDIEHYIYAVENLQEMNAL-------CSKLLK 284
+Y GC S D ++ S + + E Y +E + E+ KL
Sbjct: 210 LSLTSYTGCSSDDYVIVTPSLKYFKAFDYRSEISSYKIEKIPELEEADISIERNPEKLFV 269
Query: 285 QFQNAKCLKFQRSYHGKE 302
F++ KCL Q ++ KE
Sbjct: 270 YFKSIKCLSLQVDFNSKE 287
>AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13326853-13328315
FORWARD LENGTH=431
Length = 431
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNL- 59
+IS PD ++ ILSF+PTKD + TS+LSK W W ++ L ++ T R+N+
Sbjct: 3 IISQCPDHLLLRILSFIPTKDVIVTSLLSKRWGSLWRWVPKLEYDFT--------RQNMR 54
Query: 60 FLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCH---LDQWISVVVSRGVKKLCVN---SEN 113
F+ FVYR LL N Y C + WI + VSR V++L ++ S+
Sbjct: 55 FVKFVYRSLLQNNAPVLESLHLKNIILYAECRTVDIGGWIDIAVSRRVRELEISINCSDE 114
Query: 114 KLTLSSHSIMKYKSLEQLVLCVVGCE-IKVPTTACLSSLTVLNLSGIEF 161
K L S S+ +LE +L + C + VP CL SL L+L I +
Sbjct: 115 KFRLPS-SLYTCGTLESFILTIKHCHLVDVPLAVCLPSLKKLHLRCIGW 162
>AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:1447025-1448678
REVERSE LENGTH=448
Length = 448
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 21/258 (8%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGR--YSNRIVRRNL 59
IS+LPD ++ ILS LPT++A+ TSVLSK W WT + L F+ + + + +
Sbjct: 15 ISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVFDDDNIDPTM 74
Query: 60 FLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNS----ENKL 115
F VY+ L + + H+ WI+ +RGV+KL ++S + +
Sbjct: 75 FSENVYKTLSLHKAPVLESLHLSFEGRTDCLHVGIWIATAFARGVRKLVLDSFYQEDQTV 134
Query: 116 TLSSHSIMKYKSLEQLVL-CVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNS---GK 171
TL S SLE L L C + ++ P+ CL SL L L + F S + G
Sbjct: 135 TLPSVLFSYNDSLEILKLKCAI--DLDFPSRVCLKSLRKLYLDQVHFKDEESVCNLLCGC 192
Query: 172 LHLDFPVLRTYKTTDCTWSPRIKCVTLKAPLLEVVSIKDVRHRLPPSNESHTAMNFCASS 231
L V+ Y D + T+ +P L+ ++I+D+R N S+ A
Sbjct: 193 PSLQDLVVHRYSNAD------VATFTIASPSLQRLTIEDLRQEGGYGNGSYV---INAPG 243
Query: 232 LTKFTYKGCLSPDTIVFD 249
L G + ++ + D
Sbjct: 244 LKYLNINGVIDIESCLID 261
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS LPD ++ ILSF+PTK AV TS+LSK W + W ++T L F + RYS +R
Sbjct: 4 ISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKF-GSKRYSESEFKR--LQ 60
Query: 62 SFVYRVL-LYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSEN---KLTL 117
F+ R L L+ ++P + W+ V VSR +++L + S + K +
Sbjct: 61 CFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNI 120
Query: 118 SSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTS 166
S+ KSL L L G + VP CL SL L L G+ +F S
Sbjct: 121 LPSSLYTCKSLVILKLD-GGVLLDVPRMVCLPSLKTLELKGVRYFKQGS 168
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS LPD ++ ILSF+PTK AV TS+LSK W + W ++T L F + RYS +R
Sbjct: 4 ISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKF-GSKRYSESEFKR--LQ 60
Query: 62 SFVYRVL-LYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSEN---KLTL 117
F+ R L L+ ++P + W+ V VSR +++L + S + K +
Sbjct: 61 CFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNI 120
Query: 118 SSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTS 166
S+ KSL L L G + VP CL SL L L G+ +F S
Sbjct: 121 LPSSLYTCKSLVILKLD-GGVLLDVPRMVCLPSLKTLELKGVRYFKQGS 168
>AT5G38396.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15373094-15374726 FORWARD LENGTH=462
Length = 462
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 43/320 (13%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT-------GRYSNR 53
++ N+PD +I HILSFL TK+A TSVLSK W F+++LH +D+ G+
Sbjct: 3 LLRNIPDELICHILSFLTTKEAALTSVLSKRWRNLLAFVSNLHIDDSIFLHPEEGKRDRN 62
Query: 54 IVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSE- 112
+R++ FL FV R+L K + +D WIS V++RGV +L ++ +
Sbjct: 63 EIRQS-FLDFVGRILALQGNCPVKKVSIKFLFKLDSDRVDGWISNVLARGVSELDLSIDL 121
Query: 113 --NKLTLSSHSIMKYKSLEQL---VLCVVGCEIKVPTTAC---LSSLTVLNLSGIEFFGG 164
++ L S + K+L +L LC+ E V A L L L L + F+G
Sbjct: 122 CMDEYFLLSSKRFESKNLVRLKLHRLCIGQREKTVGWLAGEIFLPMLKTLELDYVGFYGD 181
Query: 165 TSNNSGKLHLD-FPVLRTYKTTDCTWSPRIKCVTLKAPLLEVVSIKDVRHRLPPSNESHT 223
L L P L D W VT+ P L+ +++ SN
Sbjct: 182 L------LFLRALPALEELVIVDAFWFTTFTDVTVSNPSLKTLTMS--------SNIYSG 227
Query: 224 AMNFCASSLTKFTYKGCLSPDTIVFDLSAAHIASAYIDIEHYIYAVENLQEMN------- 276
+++F SL F++ ++ D + ++ ++ A I++ + +E N
Sbjct: 228 SISFDTPSLVYFSHFKYVAKDYPLVNME--NLLEARINLGVTEGQIRRAREPNNNDEVVL 285
Query: 277 --ALCSKLLKQFQNAKCLKF 294
KL+ +N +CL
Sbjct: 286 RFPNVGKLMNGIRNVQCLDL 305
>AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr4:6224691-6225905
FORWARD LENGTH=316
Length = 316
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
I LPD ++ ILSF+PTK AV TS+LSK W + W ++T L F + RYS +R
Sbjct: 4 IIGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKF-GSKRYSESEFKR--LQ 60
Query: 62 SFVYRVL-LYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSEN---KLTL 117
F+ R L L+ ++P + W+ V VSR +++L + S + K +
Sbjct: 61 CFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNI 120
Query: 118 SSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTS 166
S+ KSL L L G + VP CL SL L L G+ +F S
Sbjct: 121 LPSSLYTCKSLVILKLD-GGVLLDVPRMVCLPSLKTLELKGVRYFKQGS 168
>AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13324130-13325559
FORWARD LENGTH=419
Length = 419
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFED---TGRYSNRIVRRN 58
IS L D ++ ILSF+P KD V TS+LSK W W +++L ++D TG Y +
Sbjct: 4 ISQLSDDLLLQILSFIPGKDVVATSLLSKRWQSLWMLVSELEYDDSYHTGDYKS------ 57
Query: 59 LFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN---SENKL 115
F FVYR LL N + WI ++R +++L +N S N
Sbjct: 58 -FSQFVYRSLLSNNAPVIKHLHLNLGPDCPAIDIGLWIGFALTRRLRQLKINIRTSSNDA 116
Query: 116 TLS-SHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF 161
+ S S+ +LE L L + + VP++ CL SL VL+L +++
Sbjct: 117 SFSLPSSLYTSDTLETLRL-INFVLLDVPSSVCLPSLKVLHLKTVDY 162
>AT3G58930.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21778381-21780014 REVERSE LENGTH=482
Length = 482
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT-------GRYSNRI 54
+SNLPD + GHILSFLP K TSVLSKSW W I L +D+ G+ + R+
Sbjct: 4 VSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGK-AERL 62
Query: 55 VRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
R F+ FV RVL + P H+++WI V+ RGV L
Sbjct: 63 EIRQSFVDFVDRVLALQDDSPIDRFSLKCITGIHPDHVNRWICNVLQRGVSDL 115
>AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128590 FORWARD LENGTH=443
Length = 443
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYS--NRIVRRN 58
+IS+LPD I HILSFLPTK+A TSVLSK W Y + F+ +L +D+ + N
Sbjct: 9 VISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIST 68
Query: 59 LFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLC--VNSENKLT 116
F+ FV RVL + +P + WI+ V+ RGV L +N E++
Sbjct: 69 SFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESEFL 128
Query: 117 LSSH 120
L S
Sbjct: 129 LPSQ 132
>AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21763742-21765306 REVERSE LENGTH=457
Length = 457
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTG--------RYSN 52
+ S LPD +I HILS LPTK+A TSVL+K W Y + F+ L F D+ R +
Sbjct: 8 LFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKREKD 67
Query: 53 RIVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCV 109
I+R F+ FV RVL +P +D+WI V+ RGV L +
Sbjct: 68 GILRS--FMDFVDRVLALQGASPIKKFSLNVKTGVDPDRVDRWICNVLQRGVSHLAL 122
>AT3G49150.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18218858-18221877 FORWARD LENGTH=630
Length = 630
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRN-- 58
+IS+LP+ +I HILSFLP +D+ TSVLSK W + + F +L F+D Y N RN
Sbjct: 17 IISDLPEALICHILSFLPIEDSALTSVLSKKWQHLFAFRPNLEFDDAVVYLNPDGERNET 76
Query: 59 LFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
+F +FV RVL + +P + +WIS V+ RGV L
Sbjct: 77 IFENFVDRVLSLQGDYPINKFSLTCRDFTDPTCVSRWISNVMERGVSDL 125
>AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128305 FORWARD LENGTH=381
Length = 381
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYS--NRIVRRN 58
+IS+LPD I HILSFLPTK+A TSVLSK W Y + F+ +L +D+ + N
Sbjct: 9 VISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIST 68
Query: 59 LFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLC--VNSENKLT 116
F+ FV RVL + +P + WI+ V+ RGV L +N E++
Sbjct: 69 SFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESEFL 128
Query: 117 LSSH 120
L S
Sbjct: 129 LPSQ 132
>AT3G58940.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21781002-21783213 REVERSE LENGTH=618
Length = 618
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT-------GRYSNRI 54
+SNLP+ + HILSFLPTK A TSVLSKSW W F T+L +D+ G+
Sbjct: 4 VSNLPEEVRCHILSFLPTKHAALTSVLSKSWLNLWKFETNLDIDDSDFLHPEEGKAERDE 63
Query: 55 VRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENK 114
+R++ F+ FV VL P H+++WI V+ RGV L + ++
Sbjct: 64 IRQS-FVEFVDGVLALQGDSPIEKFSLKCITGIHPDHVNRWICNVLQRGVSDLYLFTDFS 122
Query: 115 LTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTAC-----------LSSLTVLNL-SGIEFF 162
+ Y+ +++ + ++K+ + C L +L LN+ S + FF
Sbjct: 123 -DEDTEEDGGYRLPQEMFVSRTLVKLKLRSEHCVNWWHWDIGASLPNLKSLNIDSDLIFF 181
Query: 163 GGTSNNSGKLHLDFPVLRTYKTTDCTW 189
G K FPVL + W
Sbjct: 182 GEME----KFLSSFPVLEEVHMANMEW 204
>AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21887484-21889214 FORWARD LENGTH=520
Length = 520
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT----GRYSNRIVRR 57
IS+LP+ ++ HILSFLPTK+A TSVLSK W Y + ++T+L F+D+ G+ + +
Sbjct: 9 ISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDVELS 68
Query: 58 NLFLSFVYRVL-LYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
F+ FV RVL L N + + WI V+ RGV +L
Sbjct: 69 RSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSEL 119
>AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8124606-8126202 FORWARD LENGTH=468
Length = 468
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYS--NRIVRRN 58
+IS+LP+ I HILSFLPTK+A TSVLSK W Y + F+ +L +++ + N +
Sbjct: 9 IISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVSS 68
Query: 59 LFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
F+ FV RVL + EP + WI+ V+ RGV L
Sbjct: 69 SFMDFVDRVLALQGNSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDL 117
>AT3G59240.1 | Symbols: | RNI-like superfamily protein |
chr3:21898682-21900364 REVERSE LENGTH=504
Length = 504
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGR------YSNRI 54
+IS+LP+ +I H+LSF+PTK+A TS+LS+ W Y + F L F+D+ Y N +
Sbjct: 9 IISDLPEALICHLLSFVPTKEAALTSLLSEKWRYLFAFAPILDFDDSVWMQSPLVYMNEV 68
Query: 55 VRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCV--NSE 112
R+ F+ FV RVL + + +WIS V+ RGV L + N
Sbjct: 69 HRK--FMDFVDRVLGLQGNSTLVRFSLNCRNGIDRECIFRWISNVIERGVSDLDLGGNFV 126
Query: 113 NKLTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTS 166
+ ++ S S+ KSL +L + C I L L L+LS I F G +
Sbjct: 127 SNRSMPS-SVFVSKSLVKLRIRTENCTIIDLEDVFLPKLKTLDLSSIWFRDGDT 179
>AT3G59000.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21799757-21801536 FORWARD LENGTH=491
Length = 491
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT-------GRYSNRI 54
+ +LPD ++ HILSFL TK+A TS+LSK W Y F+ +L F+D G+
Sbjct: 4 VGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPERDE 63
Query: 55 VRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENK 114
+R++ F+ FV RVL + +D WIS V++RGV +L +
Sbjct: 64 IRQS-FMDFVDRVLALQAESPIKKFSLKCRIGVDSDRVDGWISNVLNRGVSELDLLIILG 122
Query: 115 LTLSSHSIMKYKSL--EQLVLCVVGCEIKVPTTAC---LSSLTVLNLSGIEFF 162
+T+ + K + LV +GC I + A L L L L + F+
Sbjct: 123 MTMEDSYRLSPKGFASKTLVKLEIGCGIDISWVAGSIFLPMLKTLVLDSVWFY 175
>AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21768485-21770167 REVERSE LENGTH=454
Length = 454
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT-------GRYSNR 53
++S+LPD ++GHILS L TK+A TS+LSK W Y F+ L F+D+ G+ +
Sbjct: 4 LVSSLPDDLLGHILSLLTTKEAALTSILSKRWRYLIAFVPYLEFDDSAFLNPEEGKQTRE 63
Query: 54 IVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGV 104
R++ F+ FV RVL + L+QWI V+ RGV
Sbjct: 64 GTRQS-FIDFVDRVLALHGDSPIRKFSLKCKTGVDLDLLNQWICNVLQRGV 113
>AT3G59000.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21799757-21801536 FORWARD LENGTH=345
Length = 345
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFED-------TGRYSNRI 54
+ +LPD ++ HILSFL TK+A TS+LSK W Y F+ +L F+D G+
Sbjct: 4 VGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPERDE 63
Query: 55 VRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
+R++ F+ FV RVL + +D WIS V++RGV +L
Sbjct: 64 IRQS-FMDFVDRVLALQAESPIKKFSLKCRIGVDSDRVDGWISNVLNRGVSEL 115
>AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8060681-8062231 REVERSE LENGTH=434
Length = 434
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT-------GRYSNRI 54
+S+LPD ++ HILSFL TK+A TS+LSK W +TF+ +L +D+ G+
Sbjct: 4 VSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKEDRYE 63
Query: 55 VRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
++++ F+ FV RVL ++ +D WIS ++RGV +L
Sbjct: 64 IQKS-FMKFVDRVLALQGNSPIKKLSLKLRTGFDSHRVDGWISNALARGVTEL 115
>AT5G38590.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:15452066-15453455
REVERSE LENGTH=410
Length = 410
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
I+ LPD ++ ILS++PT AV TS+LSK W + W ++ +L + T R+ + L
Sbjct: 4 INGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDY--TSRWCRKPGDVGLR- 60
Query: 62 SFVYRVL-LYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN--SENKLTLS 118
F+++ L L+ +P + +WI + VSR V L ++ SEN+
Sbjct: 61 DFIHKNLPLHRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSENENIFL 120
Query: 119 SHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTS 166
S S KSL L L V +P+ CL SL L L + F G S
Sbjct: 121 S-SFFACKSLVTLKLRSVTLR-DIPSMVCLPSLKTLLLDNVSFVEGKS 166
>AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21884740-21886101 FORWARD LENGTH=388
Length = 388
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFED-------TGRYSNR 53
+ISNLPD ++ H+LSFLPT +A TSVL+K W + F+ +L ++ GR R
Sbjct: 13 IISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKMGR-RKR 71
Query: 54 IVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
+ R F FV RV+ +P ++ W+ V+ RGV++L
Sbjct: 72 LELRKSFKLFVDRVMALQGNAPLKKFSLRCKIGSDPSRVNGWVLKVLDRGVEEL 125
>AT5G38590.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:15452586-15453455
REVERSE LENGTH=289
Length = 289
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
I+ LPD ++ ILS++PT AV TS+LSK W + W ++ +L + T R+ + L
Sbjct: 4 INGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDY--TSRWCRKPGDVGL-R 60
Query: 62 SFVYRVL-LYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN--SENKLTLS 118
F+++ L L+ +P + +WI + VSR V L ++ SEN+
Sbjct: 61 DFIHKNLPLHRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSENENIFL 120
Query: 119 SHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTS 166
S S KSL L L V +P+ CL SL L L + F G S
Sbjct: 121 S-SFFACKSLVTLKLRSVTLR-DIPSMVCLPSLKTLLLDNVSFVEGKS 166
>AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22855742-22857117
REVERSE LENGTH=430
Length = 430
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 101/247 (40%), Gaps = 28/247 (11%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS LPD ++ ILSF+PTK V T++LSK W Y W + L + D R +
Sbjct: 4 ISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLDYRDPSLVDTEHWRAS--- 60
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL----CVNSENKLTL 117
FV + LL P ++ WISV +SR V+ L + S + L
Sbjct: 61 RFVDKFLLLHEAPVLETLHLSLSRNCPPSDIETWISVAISRRVRNLHIYRYIPSTGPIRL 120
Query: 118 SSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSGKLHLDFP 177
S+ ++L L L + P C SL VL L +F N +L P
Sbjct: 121 -PRSLYTCETLVSLYLLLDFTVDDAPFMFCFRSLKVLVLLFAKFSSDEIVN--RLLSGCP 177
Query: 178 VLRTY---KTTDCTWSPRIKCVTLKAPLLEVVSIKDVRHRLP----------PSNESHTA 224
VL + D +K T+ AP L+ + D R ++P PS +S T
Sbjct: 178 VLEGLILIRRND-----NVKNFTIAAPSLQRLIAIDCRSQVPGDDVGFVIKAPSLKSLTL 232
Query: 225 MNFCASS 231
+NF S
Sbjct: 233 LNFSPHS 239
>AT1G13570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:4642528-4643930 REVERSE LENGTH=416
Length = 416
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFED--TGRYSNRIVRRN 58
IS+LP II +IL+ L +DA+RTSVLS W Y+W+ +TDL F++ ++R V
Sbjct: 7 FISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPSNDRCVVET 66
Query: 59 LFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN 110
+ F+ VLL ++ P +DQW+ + G+K+L +
Sbjct: 67 NLVRFITGVLLLHQGPIHKFQLSTSFKQCRP-DIDQWLLFLSRNGIKELVLK 117
>AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:16754436-16756263 REVERSE LENGTH=540
Length = 540
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNL-- 59
IS LPD +I HILSFLPTK+A T+VL+K W F+ +L+F+D+ + R RRN
Sbjct: 16 ISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPR-ARRNKYS 74
Query: 60 -----FLSFVYRVL 68
F+SFV VL
Sbjct: 75 KSYESFMSFVDSVL 88
>AT4G00320.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:139939-141643 FORWARD LENGTH=507
Length = 507
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIV---RRN 58
IS LPD +I HILSFLPTK A T+VL+K W F+ +L F+++ R+ R+ RR
Sbjct: 15 ISGLPDAMICHILSFLPTKVAASTTVLAKRWKPLLAFMPNLDFDESFRFDPRMTCEERRK 74
Query: 59 LFLSFVYRV----LLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGV 104
SF+ V L E E + +WI V+ RGV
Sbjct: 75 GSESFMLVVDSVLALQAEANATLNKFYVKCEGVEQNSVLEWIPKVLKRGV 124
>AT3G58820.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21752960-21754615 FORWARD LENGTH=413
Length = 413
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT--------GRYSNR 53
+S+LP+ ++ HILSFL TK+A TS+LSK W F+ +L+ +DT R
Sbjct: 4 VSSLPNELLCHILSFLTTKEAALTSILSKRWRNLIAFVPNLYIDDTVFLHPEEGKRDRPE 63
Query: 54 IVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
I++ F+ FV R+L + + +D WIS V++RGV L
Sbjct: 64 IIQS--FMDFVDRILALQGNYPIKKCSLKCLTEVDSVRVDAWISNVLARGVTDL 115
>AT3G58900.4 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774620 FORWARD LENGTH=465
Length = 465
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT--------GRYSN 52
+ S+LP+ ++ HILSFL TK+A TSVLSK W + F+ L F+D+ R
Sbjct: 3 LFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREKE 62
Query: 53 RIVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
I++ F+ FV RVL + H+D+WI V++RGV L
Sbjct: 63 GILQS--FMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDL 115
>AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), F-box domain, Skp2-like
(InterPro:IPR022364), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: FBD, F-box and
Leucine Rich Repeat domains containing protein
(TAIR:AT1G55660.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:8599035-8601761 FORWARD LENGTH=539
Length = 539
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS LPD ++ +L FLPTK AV TS+LSK W + W ++ L + +T ++ R F+
Sbjct: 174 ISRLPDDLLVKVLLFLPTKIAVSTSILSKRWEFLWMWLPKLEYHNTNYSASEEQRLRSFI 233
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL--------CVNSEN 113
+ + L +P ++ QWI + V R V++L C+ +
Sbjct: 234 NLNLQ-LHRAPIIESLRLKFSLGRSIKPQNIKQWIIIAVFRCVRELSINLFPLYCIENPA 292
Query: 114 KLTLS---SHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSG 170
KL S S S++ K +Q++ + VP A L SL L L + + SN+
Sbjct: 293 KLPSSLYISKSLVILKLKDQIL-------VDVPRMAYLPSLKYLLLKRVTY--KDSNSLH 343
Query: 171 KLHLDFPVLRT 181
+L PVL+
Sbjct: 344 QLLSSCPVLKN 354
>AT1G06630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:2028071-2031173 FORWARD LENGTH=477
Length = 477
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT----GRYSNRIVRR 57
I+ LPD I+G ILS L TK AV TSVLSK W + + L F+D+ G V
Sbjct: 14 INWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASYVFP 73
Query: 58 NLFLSFVYRVLLY-----LNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN-S 111
F V R + + E+ + C + +WIS VV RGV ++ + +
Sbjct: 74 ESFKDLVDRTVALQCDYPIRKLSLKCHVGRDDEQRKAC-VGRWISNVVGRGVSEVVLRIN 132
Query: 112 ENKLTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF--FGGTSN 167
+ L S ++ K+L +L L K+P+ L SL L + + F FG SN
Sbjct: 133 DRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFFDDFGELSN 190
>AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:9922858-9923891 FORWARD LENGTH=306
Length = 306
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS+LP+ ++ ILS LP KD V TSVLSK W W + L F+ Y N +
Sbjct: 16 ISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFD----YENNQSEDETYS 71
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPC---HLDQWISVVVSRGVKKLCVNSENKLT-- 116
V R+L L+ ++ C + WI + +R V+ L ++ E+
Sbjct: 72 EIVCRLL--LSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDLVLHVESVKGSF 129
Query: 117 LSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF 161
+ + ++LE L L + VP+ ACL SL L L +++
Sbjct: 130 IFPTGLYNCETLESLTL-RSWVLVDVPSPACLKSLRTLRLENVDY 173
>AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:24364049-24365386 FORWARD LENGTH=388
Length = 388
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS LPD ++ I+SF+PTK AV TS+LSK W W ++ L + T + +NL L
Sbjct: 4 ISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVPKLECDCTEPALRDFILKNLPL 63
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN----SENKLTL 117
LYL E + + W + +S +++L ++ N +
Sbjct: 64 QARIIESLYLR---------FRRESFLFQDIKLWGGIAISHCLRELRIDFFSHYANPYVI 114
Query: 118 SSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSGKLHLD-F 176
S+ KSL L L +G + VP CL SL L L + + + + +L L
Sbjct: 115 LPRSLYTCKSLVTLKLLGLGIRVDVPRDVCLPSLKTLLLQCVAY---SEEDPLRLLLSCC 171
Query: 177 PVLRTYKTTDCTWSPRIKCVTLKAPLLEVVSIK 209
PVL + +K + + P L+ +S+K
Sbjct: 172 PVLEDLVIELDDANQNVKALVVIVPTLQCLSLK 204
>AT1G06630.3 | Symbols: | F-box/RNI-like superfamily protein |
chr1:2028071-2030344 FORWARD LENGTH=461
Length = 461
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT----GRYSNRIVRR 57
I+ LPD I+G ILS L TK AV TSVLSK W + + L F+D+ G V
Sbjct: 14 INWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASYVFP 73
Query: 58 NLFLSFVYRVLLY-----LNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN-S 111
F V R + + E+ + C + +WIS VV RGV ++ + +
Sbjct: 74 ESFKDLVDRTVALQCDYPIRKLSLKCHVGRDDEQRKAC-VGRWISNVVGRGVSEVVLRIN 132
Query: 112 ENKLTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF--FGGTSN 167
+ L S ++ K+L +L L K+P+ L SL L + + F FG SN
Sbjct: 133 DRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFFDDFGELSN 190
>AT3G58900.3 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774074 FORWARD LENGTH=314
Length = 314
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT--------GRYSN 52
+ S+LP+ ++ HILSFL TK+A TSVLSK W + F+ L F+D+ R
Sbjct: 3 LFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREKE 62
Query: 53 RIVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
I++ F+ FV RVL + H+D+WI V++RGV L
Sbjct: 63 GILQS--FMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDL 115
>AT4G27050.4 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT------------- 47
+ISNLPD ++G ILS +PTK A TSVLSK W + L F++T
Sbjct: 5 LISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGEDE 64
Query: 48 -GRYSNRIVRRNLFLSFVYRVLLYL-NXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVK 105
Y + RR+ F FV + L L N + + +++WI + RG
Sbjct: 65 ASSYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHEDDGARINRWIRTALERGCL 124
Query: 106 KLCVNSENKLTLSSH 120
+L + + N L + S
Sbjct: 125 ELNLEAANYLPIDSQ 139
>AT4G27050.3 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT------------- 47
+ISNLPD ++G ILS +PTK A TSVLSK W + L F++T
Sbjct: 5 LISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGEDE 64
Query: 48 -GRYSNRIVRRNLFLSFVYRVLLYL-NXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVK 105
Y + RR+ F FV + L L N + + +++WI + RG
Sbjct: 65 ASSYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHEDDGARINRWIRTALERGCL 124
Query: 106 KLCVNSENKLTLSSH 120
+L + + N L + S
Sbjct: 125 ELNLEAANYLPIDSQ 139
>AT4G27050.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT------------- 47
+ISNLPD ++G ILS +PTK A TSVLSK W + L F++T
Sbjct: 5 LISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGEDE 64
Query: 48 -GRYSNRIVRRNLFLSFVYRVLLYL-NXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVK 105
Y + RR+ F FV + L L N + + +++WI + RG
Sbjct: 65 ASSYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHEDDGARINRWIRTALERGCL 124
Query: 106 KLCVNSENKLTLSSH 120
+L + + N L + S
Sbjct: 125 ELNLEAANYLPIDSQ 139
>AT4G27050.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT------------- 47
+ISNLPD ++G ILS +PTK A TSVLSK W + L F++T
Sbjct: 5 LISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGEDE 64
Query: 48 -GRYSNRIVRRNLFLSFVYRVLLYL-NXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVK 105
Y + RR+ F FV + L L N + + +++WI + RG
Sbjct: 65 ASSYESGQRRRHSFSHFVDKTLALLSNAPLTEKFSLKCYHEDDGARINRWIRTALERGCL 124
Query: 106 KLCVNSENKLTLSSH 120
+L + + N L + S
Sbjct: 125 ELNLEAANYLPIDSQ 139
>AT3G44810.1 | Symbols: | F-box family protein |
chr3:16358496-16359983 REVERSE LENGTH=448
Length = 448
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 5 LPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNL----- 59
LPD ++ H+LS L TK A TSVLSK W + +L F+D+ + +N+
Sbjct: 12 LPDELLVHVLSSLETKQAASTSVLSKRWRTLFAVRRNLDFDDSIISHPEVGEQNMDDVQE 71
Query: 60 -FLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKK--LCVNS-ENKL 115
F FV + L + +K++ +D+WI+ + GV + LC+ S +L
Sbjct: 72 SFRDFVDKRLAFQGSVPINKFSLIYGDKHDDVRVDRWINTALEHGVSELHLCLTSVTRRL 131
Query: 116 TLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF 161
++ + +L +L L + P+ CL L +L L I F
Sbjct: 132 HRFPSNVFRSTTLVKLTLGTNLFIVYFPSDTCLPVLKILVLDSIWF 177
>AT1G06630.2 | Symbols: | F-box/RNI-like superfamily protein |
chr1:2028071-2029442 FORWARD LENGTH=403
Length = 403
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT----GRYSNRIVRR 57
I+ LPD I+G ILS L TK AV TSVLSK W + + L F+D+ G V
Sbjct: 14 INWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASYVFP 73
Query: 58 NLFLSFVYRVLLY-----LNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN-S 111
F V R + + E+ + C + +WIS VV RGV ++ + +
Sbjct: 74 ESFKDLVDRTVALQCDYPIRKLSLKCHVGRDDEQRKAC-VGRWISNVVGRGVSEVVLRIN 132
Query: 112 ENKLTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF--FGGTSN 167
+ L S ++ K+L +L L K+P+ L SL L + + F FG SN
Sbjct: 133 DRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFFDDFGELSN 190
>AT3G03030.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:682252-683850 FORWARD LENGTH=474
Length = 474
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITD--------LHFEDTGRYSN 52
++S+LPD + HILSFL TK++ TSVLSK W +T + + LH E+T
Sbjct: 3 LVSSLPDDVRCHILSFLTTKESALTSVLSKKWRNLFTLVPNLDLDDSEYLHPEETKWERE 62
Query: 53 RIVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
I+ + FL FV RVL P L++W+ V+ RGV L
Sbjct: 63 EIL--DSFLDFVERVLSLQGNGPIRRFSLRCESGVPPARLNRWLCKVLQRGVADL 115
>AT3G58900.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774013 FORWARD LENGTH=327
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT--------GRYSN 52
+ S+LP+ ++ HILSFL TK+A TSVLSK W + F+ L F+D+ R
Sbjct: 3 LFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREKE 62
Query: 53 RIVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
I++ F+ FV RVL + H+D+WI V++RGV L
Sbjct: 63 GILQS--FMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDL 115
>AT3G58900.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774013 FORWARD LENGTH=327
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT--------GRYSN 52
+ S+LP+ ++ HILSFL TK+A TSVLSK W + F+ L F+D+ R
Sbjct: 3 LFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREKE 62
Query: 53 RIVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
I++ F+ FV RVL + H+D+WI V++RGV L
Sbjct: 63 GILQS--FMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDL 115
>AT3G50710.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:18845199-18846673
REVERSE LENGTH=427
Length = 427
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 19/224 (8%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
ISNL D ++ I+S LPTKD V T +LSK W + W + L F+D R FL
Sbjct: 4 ISNLSDDLLLKIVSSLPTKDVVVTMLLSKRWKFLWMMVPKLRFDDEFELEPSYYGR--FL 61
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPC----HLDQWISVVVSRGVKKLCVN------S 111
+V + ++ LN PC + WI + + R +++L ++
Sbjct: 62 KYVDKSMV-LNRAQVLETVKFNV---GPCCSSEDIATWIRIGMVRNMRELEISHCEGYFR 117
Query: 112 ENKLTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSGK 171
E++ S+ Y+ LE L L + VP C SL L+L +E+ T + +
Sbjct: 118 EHRSIKLPKSLYTYEKLEVLKLASTVV-LNVPIDVCFPSLKSLHLVCVEY--KTKKSHRR 174
Query: 172 LHLDFPVLRTYKTTDCTWSPRIKCVTLKAPLLEVVSIKDVRHRL 215
L PVL S ++ ++ P L+ +SI D L
Sbjct: 175 LLSGCPVLEELVLDKSYNSFHVRSFYVEIPTLQSLSILDTSGEL 218
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE LENGTH=737
Length = 737
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 86/194 (44%), Gaps = 22/194 (11%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRY----SNRI-V 55
+IS LPD ++G ILS + TK+AV TSVLSK W + +++L +D NRI +
Sbjct: 6 VISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQNRIEI 65
Query: 56 RRNLFLSFVYRVLLYLNXXXXXXXXXXX----XEKYEPCHLDQWISVVVSRGVKKLCVNS 111
RN +++FV ++L + + WI V+ GV L V
Sbjct: 66 HRN-YMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDVF- 123
Query: 112 ENKLTLSSHS------IMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGT 165
+TL S I K K+L +L + G IK+ L L L L + F GG
Sbjct: 124 ---ITLKGKSPPVPAMIFKSKTLVKLRVG-RGFTIKLSQDVSLPLLRTLCLDSVNFVGG- 178
Query: 166 SNNSGKLHLDFPVL 179
N G L PVL
Sbjct: 179 HNVVGTLISRCPVL 192
>AT5G41630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:16650282-16651835 FORWARD LENGTH=455
Length = 455
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT 47
+IS+LPD +IGHILSFLPT +AV T+VL+K W +F+ L F+D+
Sbjct: 13 IISDLPDALIGHILSFLPTIEAVATTVLAKRWKPLLSFVHSLDFDDS 59
>AT5G38386.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15363178-15364815 FORWARD LENGTH=403
Length = 403
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTG------RYSNRIV 55
+SNLPD ++ HI+SFL TK+A SVLSK W F+ +L D R R
Sbjct: 4 LSNLPDELLCHIMSFLTTKEAALISVLSKRWRNLIAFVPNLDIFDCDILHWEVRKEERDD 63
Query: 56 RRNLFLSFVYRVL-LYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
R LF+ FV RVL L N Y +D WI V+ RGV +L
Sbjct: 64 IRQLFMDFVDRVLALQGNSPLKKFSLCCGGGSYSD-RVDCWIQNVMVRGVSEL 115
>AT1G49610.1 | Symbols: | F-box family protein |
chr1:18361679-18363192 REVERSE LENGTH=354
Length = 354
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS+LPD I+ LS +PTK A+RTSVLSK W + W+ L F+D + + + L L
Sbjct: 28 ISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDFDDCYKLDVDFIDKTLAL 87
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKLTLSSHS 121
+++ + ++D WI +SR V+ L ++ + +L
Sbjct: 88 YRARKIMTF---------DLWITNGINLPYIDGWIKFAMSRNVENLFLSFDFRLYDVPDY 138
Query: 122 IMKYKSLEQLVLCVV--GCEI 140
+ S++QL + + GC I
Sbjct: 139 LYINSSVKQLSIAKILSGCPI 159
>AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:26191640-26193174 REVERSE LENGTH=451
Length = 451
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS LPD ++ +L LPTKD V+TSVLS+ W W + L ++T N FL
Sbjct: 20 ISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLDNTD-----FQEFNTFL 74
Query: 62 SFVYRVLLYLNXXXXXXXXXXX--XEKYEP--CHLDQWISVVVSRGVKKLCVNSEN---- 113
SFV L + + ++Y+P + +WI+ +V+R V+ + V ++
Sbjct: 75 SFVDSFLDFNSESFLQKFILKYDCDDEYDPDIFLIGRWINTIVTRKVQHIDVLDDSYGSW 134
Query: 114 KLTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF 161
++ L S SI +SL L LC G + P L SL V++L +F
Sbjct: 135 EVQLPS-SIYTCESLVSLKLC--GLTLASPEFVSLPSLKVMDLIITKF 179
>AT3G62440.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:23096104-23097726 REVERSE LENGTH=457
Length = 457
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 126/308 (40%), Gaps = 22/308 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT---GRYSNRIVRRN 58
ISNLPD II HI SFL ++A T+VLSK W +T + DLHF+ + G V R
Sbjct: 4 ISNLPDEIICHIGSFLSAREAAFTTVLSKRWHNLFTIVPDLHFDSSVKDGESLTDFVDRV 63
Query: 59 LFLSFVYRV-------LLYLNXXXXXXXXXXXXEKYEPCHLDQW---ISVVVSRGVKK-- 106
+ L RV + E EP DQ + VV+ RGV
Sbjct: 64 MALPASSRVNKLSLKWWFDEDTDSAQFDEDTEPEDTEPAQFDQINRSLRVVLKRGVADFY 123
Query: 107 LCVNSENKLTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTS 166
L V+ + TL + +++ +L L +P A L +L L+L + F+
Sbjct: 124 LWVHGKQGYTL-PFEVFTCETVTKLSLGSGFAIDFLPENALLPALKTLSLYHVRFYEFGR 182
Query: 167 NNSGKLHLDFPVLRTYKTTDCTWSPRIKCVTLKAPLLEVVSIKDVRHRLPPSNESH-TAM 225
L PVL W T+ + L+ ++I +R + ++S ++
Sbjct: 183 CAFKTLLASSPVLEELTVCGVNWELWKWSRTVSSSSLKRLTI--MRKQWDAFDDSDFKSI 240
Query: 226 NFCASSLTKFTYKGCLSPDTIVFDLSAAHIASAYI-DIEHYIYAVENLQEMNALCSKLLK 284
+F SL Y + + + +L + Y+ E+Y++ + + N + LL
Sbjct: 241 SFDTPSLAYLYYSDYVPKEYLSVNLDSLVETKLYLCPEENYMWGKGDEKRFNPI--NLLH 298
Query: 285 QFQNAKCL 292
+N + L
Sbjct: 299 GLKNVETL 306
>AT1G64540.1 | Symbols: | F-box/FBD-like domains containing protein
| chr1:23966909-23968425 FORWARD LENGTH=444
Length = 444
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLF 60
ISNLPD I+G ILS LPTK V TSVLSK W + + ED+ F
Sbjct: 6 FISNLPDEILGKILSLLPTKLGVSTSVLSKRWRNLILLVDNFDLEDSSTSG--------F 57
Query: 61 LSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSE--NKLTLS 118
+F+ + + LN Y D WIS RG +L + S+ + LS
Sbjct: 58 SAFLEQTVARLN-TCPIKRLSLNGRHYRFSSADSWISTAFERGCLELHLQSQYLDTGILS 116
Query: 119 SHSIMKYKSLEQLVL 133
S++++K +Q+ L
Sbjct: 117 SNTLVKLTLSDQIYL 131
>AT2G42730.2 | Symbols: | F-box family protein |
chr2:17789606-17791218 REVERSE LENGTH=457
Length = 457
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 86/194 (44%), Gaps = 22/194 (11%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRY----SNRI-V 55
+IS LPD ++G ILS + TK+AV TSVLSK W + +++L +D NRI +
Sbjct: 6 VISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQNRIEI 65
Query: 56 RRNLFLSFVYRVLLYLNXXXXXXXXXXX----XEKYEPCHLDQWISVVVSRGVKKLCVNS 111
RN +++FV ++L + + WI V+ GV L V
Sbjct: 66 HRN-YMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDV-- 122
Query: 112 ENKLTLSSHS------IMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGT 165
+TL S I K K+L +L + G IK+ L L L L + F GG
Sbjct: 123 --FITLKGKSPPVPAMIFKSKTLVKLRVG-RGFTIKLSQDVSLPLLRTLCLDSVNFVGG- 178
Query: 166 SNNSGKLHLDFPVL 179
N G L PVL
Sbjct: 179 HNVVGTLISRCPVL 192
>AT3G18150.1 | Symbols: | RNI-like superfamily protein |
chr3:6217929-6219500 FORWARD LENGTH=456
Length = 456
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 34/127 (26%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFED-----------TGRY 50
IS+LPD I+ HILSF+PTK A+ TS+LSK W + W L F D RY
Sbjct: 33 ISSLPDVILQHILSFIPTKLAITTSLLSKRWRHVWCDTPSLSFNDYRLEAPFIDETLTRY 92
Query: 51 -SNRIVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCV 109
+++++R +L S + V HL+ WI +SR V L +
Sbjct: 93 TASKMMRFHLHTSLINNV----------------------PHLESWIKFAMSRNVDHLSL 130
Query: 110 NSENKLT 116
+ N++
Sbjct: 131 DLWNQVA 137
>AT3G59250.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21901726-21903284 REVERSE LENGTH=425
Length = 425
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT 47
ISNLP+ +I HILSFLP +D+ TSVLSK W Y + F +L F+D+
Sbjct: 9 ISNLPEALICHILSFLPIEDSALTSVLSKRWRYLFAFRPNLVFDDS 54
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 109/260 (41%), Gaps = 31/260 (11%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTG------------R 49
IS LPD ++G ILS +PTK AV TS+L+K W + + L +D+ R
Sbjct: 234 ISWLPDEVLGKILSLIPTKQAVSTSLLAKKWRTIFRLVDHLELDDSFSLQAVKDQTPGLR 293
Query: 50 YSNRIVRRNLFLSFVYRVLLY-----LNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGV 104
R V F FV R L + E+ + C + +WIS VV RGV
Sbjct: 294 KHVRFVFTEDFKIFVDRTLALQCDYPIKNFSLKCHVSKYDERQKAC-VGRWISNVVGRGV 352
Query: 105 KKLCVNSENKLT--LSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFF 162
+L + ++ L H ++ K+L +L L C ++P+ L SL L + I F+
Sbjct: 353 FELDLRMKDPGIHFLPPH-LVASKTLVKLTLGTQLCLGQLPSYVSLPSLKSLFIDTIVFY 411
Query: 163 GGTSNNSGKLHLDFPVLRTYKT--TDCTWSPRIKCVTLKAPLLEVVSIKDVRHRLPPSNE 220
+ L PVL D +P T+ +P L+ +S V + P +
Sbjct: 412 -DIEDLCCVLLAGCPVLEELSVHHHDFIATPH----TISSPTLKRLS---VDYHCPDDVD 463
Query: 221 SHTAMNFCASSLTKFTYKGC 240
S + M+F L Y C
Sbjct: 464 SASHMSFDLPKLVYLEYSHC 483
>AT1G66300.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:24716497-24718050
REVERSE LENGTH=456
Length = 456
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFIT--DLHFEDTGRYSNRIVRRNL 59
+ +LP+ +I H+L L TKD ++ VLS W Y W ++ DL D Y N
Sbjct: 31 VRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVPGLDLDCSDFTEY-------NT 83
Query: 60 FLSFVYRVL-----LYLNXXXXXXX-XXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSEN 113
F+SFV R L YLN E+ + +WI+ VV R V+ L + E
Sbjct: 84 FVSFVDRFLSTNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQHL--DLEW 141
Query: 114 KLTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF 161
+ KSL L LC G + +P CL S+ V+ L ++F
Sbjct: 142 GALEIPPIVYVCKSLVSLKLC--GVILPIPEFVCLPSVKVIVLDWVKF 187
>AT3G59170.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21878167-21879799 FORWARD LENGTH=473
Length = 473
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT------GRYSNRI 54
MI+ LPD ++ HILSFL TK+A TS+LS+ W Y F+ +L F+D+ R N +
Sbjct: 8 MINVLPDALLCHILSFLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSVYLHRDKRVKNTL 67
Query: 55 VRRNL-----------------FLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQ--- 94
+ F FV R+L + ++P D
Sbjct: 68 HEKGFVGFVLLVNNKRKKLSTSFPDFVDRILALQGNSPLDKFSLKMVDGHDPVDPDSVVP 127
Query: 95 WISVVVSRGVKKL 107
WI V+ RGV L
Sbjct: 128 WIHKVLVRGVSDL 140
>AT3G59230.1 | Symbols: | RNI-like superfamily protein |
chr3:21896052-21897787 REVERSE LENGTH=491
Length = 491
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRN-- 58
+I++LP+ +I HILSFL TK+A TS+LS+ W Y + F+ +L F+D R + +
Sbjct: 13 IINSLPEALIYHILSFLSTKEAAITSLLSRKWRYFFAFVPNLDFDDPVRMQPDMGNQEET 72
Query: 59 ----LFLSFVYRVL 68
F+ FV RVL
Sbjct: 73 EIHTSFMDFVDRVL 86
>AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776054-11777517 REVERSE LENGTH=415
Length = 415
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 88/214 (41%), Gaps = 8/214 (3%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
I+ L D II HILS L K+A TSVLS W Y + F +L +D + + F+
Sbjct: 4 INGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDD-----QEVGGGDSFI 58
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKLTLS--S 119
FV RVL+ + H+ +W+ V+ GV L ++ ++ +
Sbjct: 59 DFVDRVLVVTGNFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDIISEDDIGFVP 118
Query: 120 HSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSGKLHLDFPVL 179
I K+L +L L G VP L SL L LS I F G+L PVL
Sbjct: 119 LEIFTCKTLVELKL-ARGFYAMVPDYVSLPSLKTLFLSSIWFCNRDCCPLGRLLSACPVL 177
Query: 180 RTYKTTDCTWSPRIKCVTLKAPLLEVVSIKDVRH 213
W C T+ + L+ ++I H
Sbjct: 178 EELTIIGGCWQHIEFCRTVSSSTLKKLTITSSFH 211
>AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29613122-29614695 REVERSE LENGTH=458
Length = 458
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 33/180 (18%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFIT-------DLHFEDTGRYSNRI 54
ISNLP+ ++ +L +LPTKD V++SVLS W W ++ D H +T Y +
Sbjct: 20 ISNLPETLLCQVLFYLPTKDVVKSSVLSSRWRNLWKYVPGFNLSYCDFHVRNTFSYDH-- 77
Query: 55 VRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKY---EP--CHLDQWISVVVSRGVKKL-- 107
N FL FV + + N + EP + +WI+ VVSR VK L
Sbjct: 78 ---NTFLRFVDSFMGF-NSQSCLQSFRLEYDSSGYGEPKLALIRRWINSVVSRKVKYLGV 133
Query: 108 ----CVNSENKL--TLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF 161
C N E ++ TL + + Y +L+ G + P L SL L+LS ++F
Sbjct: 134 LDDSCDNYEFEMPPTLYTCETLVYLTLD-------GLSLASPKFVSLPSLKELHLSIVKF 186
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFE----DTGRYSNRIVRR 57
IS LPD ++ ILS LPT V TSVLSK W W + +L F+ ++ Y+ +
Sbjct: 23 ISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFSEIVC 82
Query: 58 NLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN------S 111
FLS VL + P + W+ + SR +++L ++
Sbjct: 83 KSFLSHKAPVLESFRLKFV---------NFNPVDIGLWVGIAFSRHLRELVLDFYPAELG 133
Query: 112 ENKLTLSSHSIMKYKSLE--QLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNN- 168
+ S+ +LE +LVLC++ + +P+ + SL L+L + + +S
Sbjct: 134 KGVTFTFPSSLCTCNTLETLKLVLCIL---VDIPSPVLMKSLRTLHLEFVRYKDESSVRN 190
Query: 169 --SGKLHLDFPVLRTYKTTDCTWSPRIKCVTLKAPLLEVVSIKD 210
SG L+ LR Y+ D IK T++ P L+ ++I D
Sbjct: 191 LLSGCPGLE--ELRLYRGDDSD----IKVFTIEVPSLQRLTIHD 228
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFE----DTGRYSNRIVRR 57
IS LPD ++ ILS LPT V TSVLSK W W + +L F+ ++ Y+ +
Sbjct: 23 ISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFSEIVC 82
Query: 58 NLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN------S 111
FLS VL + P + W+ + SR +++L ++
Sbjct: 83 KSFLSHKAPVLESFRLKFV---------NFNPVDIGLWVGIAFSRHLRELVLDFYPAELG 133
Query: 112 ENKLTLSSHSIMKYKSLE--QLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNN- 168
+ S+ +LE +LVLC++ + +P+ + SL L+L + + +S
Sbjct: 134 KGVTFTFPSSLCTCNTLETLKLVLCIL---VDIPSPVLMKSLRTLHLEFVRYKDESSVRN 190
Query: 169 --SGKLHLDFPVLRTYKTTDCTWSPRIKCVTLKAPLLEVVSIKD 210
SG L+ LR Y+ D IK T++ P L+ ++I D
Sbjct: 191 LLSGCPGLE--ELRLYRGDDSD----IKVFTIEVPSLQRLTIHD 228
>AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS LPD + ILS LPTKD + TSVLSK W Y W + L + + ++ F+
Sbjct: 4 ISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYSLIDKNAD----HGTFV 59
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSEN 113
FV R LL + + W+ + V +G+ +L + E+
Sbjct: 60 RFVDRSLLLSMAPVLESLHLKLGRQCSEVDIGFWVRIAVEKGLCELDFDYEH 111
>AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS LPD + ILS LPTKD + TSVLSK W Y W + L + + ++ F+
Sbjct: 4 ISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYSLIDKNAD----HGTFV 59
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSEN 113
FV R LL + + W+ + V +G+ +L + E+
Sbjct: 60 RFVDRSLLLSMAPVLESLHLKLGRQCSEVDIGFWVRIAVEKGLCELDFDYEH 111
>AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:63465-65365 FORWARD
LENGTH=453
Length = 453
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHF-----EDTGRYSNRIVR 56
IS LPD ++ ILSFLPTK V TSV SK W W + +L F +D +Y+ +
Sbjct: 18 ISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKEQYTFSEIV 77
Query: 57 RNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKLT 116
FLS VL EK +P + W+ + SR +++L + + + T
Sbjct: 78 CKSFLSHKAPVL-------ESFRLEFESEKVDPVDIGLWVGIAFSRHLRELVLVAADTGT 130
Query: 117 LSS----HSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF 161
++ S+ +LE L L ++ + + + + SL L+L + +
Sbjct: 131 GTAFKFPSSLCTCNTLETLRLVLL-ILVDISSPVVMKSLRTLHLELVSY 178
>AT1G66310.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:24722971-24724475
REVERSE LENGTH=442
Length = 442
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
+ +LP+ ++ HIL LPTKD V+TSVLS W W + L + S+ N F+
Sbjct: 21 LRDLPESLLCHILLNLPTKDVVKTSVLSSKWRNLWRLVPGLDLD-----SSDFTENNTFV 75
Query: 62 SFVYRVL-----LYLNXXXXXXX-XXXXXEKYEPCHLDQWISVVVSRGVKKL 107
SF+ R + LYL E E H+ +WI+ VV R V L
Sbjct: 76 SFIDRFMSFHSDLYLKKFKLRFFCNLNGDEVSENAHIARWINDVVKRKVHNL 127
>AT3G51530.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19112873-19114497
REVERSE LENGTH=455
Length = 455
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 28/179 (15%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNL-- 59
IS LP+ ++ ILS LPTK + TSVLSK W W + L FE + RN+
Sbjct: 32 ISELPEVLLLQILSSLPTKLVISTSVLSKRWLSLWKMVQRLEFESS---------RNIYD 82
Query: 60 FLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKLTLSS 119
F V R LL ++++ ++ W ++ +R V++ L LSS
Sbjct: 83 FAENVTRSLLSHKAPVLESLHLKVGDQFDGVYVGVWATIAFTRHVREFV------LDLSS 136
Query: 120 H---------SIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNS 169
+ S+ + +LE L L V I VP + SL L+L + + G S ++
Sbjct: 137 YHGPRVRFPTSLFCFDTLETLKLDYV--YIYVPCPVSMKSLRTLHLLSVVYKGDESGHN 193
>AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776368-11777517 REVERSE LENGTH=332
Length = 332
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 88/214 (41%), Gaps = 8/214 (3%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
I+ L D II HILS L K+A TSVLS W Y + F +L +D + + F+
Sbjct: 4 INGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDD-----QEVGGGDSFI 58
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKLTLS--S 119
FV RVL+ + H+ +W+ V+ GV L ++ ++ +
Sbjct: 59 DFVDRVLVVTGNFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDIISEDDIGFVP 118
Query: 120 HSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSGKLHLDFPVL 179
I K+L +L L G VP L SL L LS I F G+L PVL
Sbjct: 119 LEIFTCKTLVELKL-ARGFYAMVPDYVSLPSLKTLFLSSIWFCNRDCCPLGRLLSACPVL 177
Query: 180 RTYKTTDCTWSPRIKCVTLKAPLLEVVSIKDVRH 213
W C T+ + L+ ++I H
Sbjct: 178 EELTIIGGCWQHIEFCRTVSSSTLKKLTITSSFH 211
>AT5G22610.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7515217-7516916
FORWARD LENGTH=472
Length = 472
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT 47
+IS LP+ ++ ILS+LPTKD VRTSVLSK W W I L + +
Sbjct: 19 LISKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWLLIPGLDLDSS 65
>AT2G29910.1 | Symbols: | F-box/RNI-like superfamily protein |
chr2:12751686-12752830 REVERSE LENGTH=352
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLF 60
+IS+LPD I+G +LS LPTK A T+VLSK W + L D I F
Sbjct: 6 LISSLPDEILGKVLSLLPTKRAASTAVLSKRWNNLPALVDKLDINDA------IGGPGGF 59
Query: 61 LSFVYRVLLYLNXXXXXXXXXXXXE-KYEPCHLDQWISVVVSRGVKKLCVNSENKLTLSS 119
F+ + L L E +Y ++ WI + RG +L +N+++ T+ +
Sbjct: 60 PEFIDKTLALLTNSTTIKRTSLNNEFQYGESQVNTWIRSFLERGCLQLYLNAQSLYTIDT 119
Query: 120 H 120
Sbjct: 120 E 120
>AT5G38390.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15366432-15368053 FORWARD LENGTH=456
Length = 456
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLF 60
++SNLP ++ HILSFL TK+A TSVLSK W F+ ++ D R LF
Sbjct: 3 LLSNLPYELLCHILSFLTTKEAALTSVLSKRWRNLIAFVPNVDIVDHD-------IRELF 55
Query: 61 LSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
+ FV RV L L + +D WI V+ RGV +L
Sbjct: 56 MDFVDRV-LALQGNSPINKFSLDCSGVDSDRVDCWIQNVMVRGVSEL 101
>AT3G59160.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21875023-21876641 FORWARD LENGTH=464
Length = 464
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTG 48
MI++LPD ++ H+LS+L TK+A TS+LS+ W Y F+ +L F+D+
Sbjct: 14 MINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSA 61
>AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29615174-29616738 REVERSE LENGTH=452
Length = 452
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
+SNLP+ +I I+ +PTKD V++SVLSK W W ++ L+ E N+ + N F+
Sbjct: 18 LSNLPESLICQIMLNIPTKDVVKSSVLSKRWRNLWRYVPGLNVE-----YNQFLDYNAFV 72
Query: 62 SFVYRVLLYLNXXXXXXXXXX---XXEKYEPCHLDQWISVVVSRGVKKLCV 109
SFV R L E+ ++ +WI++VV + +K L V
Sbjct: 73 SFVDRFLALDRESCFQSFRLRYDCDEEERTISNVKRWINIVVDQKLKVLDV 123
>AT1G58310.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:21631947-21633642 FORWARD LENGTH=505
Length = 505
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRN 58
+IS LPD ++ HILSFL TK+A TSVL+K W Y + + +L F+D+ R+ +RN
Sbjct: 9 IISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDFDDSVHL--RLGKRN 64
>AT2G29910.2 | Symbols: | F-box/RNI-like superfamily protein |
chr2:12751823-12752830 REVERSE LENGTH=335
Length = 335
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLF 60
+IS+LPD I+G +LS LPTK A T+VLSK W + L D I F
Sbjct: 6 LISSLPDEILGKVLSLLPTKRAASTAVLSKRWNNLPALVDKLDINDA------IGGPGGF 59
Query: 61 LSFVYRVLLYLNXXXXXXXXXXXXE-KYEPCHLDQWISVVVSRGVKKLCVNSENKLTLSS 119
F+ + L L E +Y ++ WI + RG +L +N+++ T+ +
Sbjct: 60 PEFIDKTLALLTNSTTIKRTSLNNEFQYGESQVNTWIRSFLERGCLQLYLNAQSLYTIDT 119
Query: 120 H 120
Sbjct: 120 E 120
>AT5G02930.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:682577-684480 FORWARD LENGTH=469
Length = 469
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFE 45
IS+LPD ++ HI S++PT+ A+RTSVLSK W + W+ L FE
Sbjct: 30 ISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHLSFE 73
>AT1G22000.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:7744189-7747123
FORWARD LENGTH=717
Length = 717
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYS 51
I LPD ++ IL +PTK+AV TS+LSK W Y W + L F+D G S
Sbjct: 31 ICALPDDLLLQILPHVPTKEAVATSILSKQWRYVWLMLPKLEFKDEGSES 80
>AT5G56560.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:22899724-22901985
FORWARD LENGTH=607
Length = 607
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 2 ISNLPDFIIGHILSFLPT-KDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLF 60
+S+LPD ++ ILS LP K + T ++S+ W W + D+ F+D F
Sbjct: 7 LSDLPDELLLKILSALPMFKVTLATRLISRRWKGPWKLVPDVTFDDDDIPFKSF---ETF 63
Query: 61 LSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKLT---- 116
+SFVY L + +KY ++ W+ V V+R V++L ++ K
Sbjct: 64 MSFVYGSFLSNDAQILDRLHLKLNQKYSASDINFWVQVAVNRSVRELRIDLFGKTLELPC 123
Query: 117 -LSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTV 153
L S +K +L L + VV ++P+ L L+V
Sbjct: 124 CLCSCITLKELTLHDLCIKVVPAWFRLPSLKTLHLLSV 161
>AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:5789987-5791534
FORWARD LENGTH=449
Length = 449
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
ISNLPD ++ ILS L TK++V TSVLSK W W + L + SN ++F+
Sbjct: 17 ISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLD-----SNNFPDDDVFV 71
Query: 62 SFVYRVLLYLNXXXXXX-XXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSE 112
SFV R L N +++ WI+ V+ R V V++E
Sbjct: 72 SFVNRFLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHFNVHNE 123
>AT5G02910.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:677120-678907 FORWARD LENGTH=458
Length = 458
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWT 37
IS+LPD I+ HILS +PTK A+RTS+LSK W Y W+
Sbjct: 13 ISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWS 48
>AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRW--TFITDLHFEDTGRYSNRIVRRNL 59
I LPD ++ +LS+LPT D+V+TSVLSK W + W + DL D +
Sbjct: 6 ICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVSDFPDEN-------- 57
Query: 60 FLSFVYRVLLYLNXXXXXXXXXXXXE-KYEPCHLDQWISVVVSRGVKKLCVNS-ENKLTL 117
+ SF+ L + E Y+ L W+ V RG++ L E + +
Sbjct: 58 YASFIDNFLEFNRKSRMRKFKLKYDEYTYDDDRLAGWVVTTVDRGIQHLDAKGFETNMCV 117
Query: 118 SS---HSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGG 164
+I K +L L+L VG E L SL +++L + ++
Sbjct: 118 REFMPQNIYKCNTLVSLMLVTVGIE-NPEFVVSLPSLKIMHLEDVWYYDD 166
>AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRW--TFITDLHFEDTGRYSNRIVRRNL 59
I LPD ++ +LS+LPT D+V+TSVLSK W + W + DL D +
Sbjct: 6 ICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVSDFPDEN-------- 57
Query: 60 FLSFVYRVLLYLNXXXXXXXXXXXXE-KYEPCHLDQWISVVVSRGVKKLCVNS-ENKLTL 117
+ SF+ L + E Y+ L W+ V RG++ L E + +
Sbjct: 58 YASFIDNFLEFNRKSRMRKFKLKYDEYTYDDDRLAGWVVTTVDRGIQHLDAKGFETNMCV 117
Query: 118 SS---HSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGG 164
+I K +L L+L VG E L SL +++L + ++
Sbjct: 118 REFMPQNIYKCNTLVSLMLVTVGIE-NPEFVVSLPSLKIMHLEDVWYYDD 166
>AT1G52650.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:19610643-19612417 FORWARD LENGTH=507
Length = 507
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT-------GRYSNRI 54
+S+LP+ ++ +I SFL TK+A TS+L K W F+ +L +D+ G+
Sbjct: 46 VSSLPEGVLCNIFSFLTTKEAALTSILCKRWRNLLAFVPNLVIDDSVFLHPEEGKEERYE 105
Query: 55 VRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCV 109
++++ F+ FV RVL + ++ WIS V++RGV +L V
Sbjct: 106 IQQS-FMEFVDRVLALQGNSPIKKFSLKFRTDFASHRVNAWISNVLARGVSELDV 159
>AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:29639290-29640817
REVERSE LENGTH=439
Length = 439
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 5 LPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTG-RYSNRIVRRNLFLSF 63
LPD ++ IL L TKD+V+TS+LS W Y W + L T RY N FL
Sbjct: 11 LPDHVLHEILLKLATKDSVKTSILSTRWRYIWQRVPGLDLNQTNFRYKGLKGFVNRFLDL 70
Query: 64 VYRVLLYLNXXXXXXXXXXXXEKYEP--CHLDQWISVVVSRGVKKLCVN 110
+ L+Y KYE ++W+ VV+RGV+ L N
Sbjct: 71 DKKSLIY------QLKLEFDGRKYETEGSLFNKWVDSVVTRGVQHLVNN 113
>AT5G02910.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:677120-678588 FORWARD LENGTH=353
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWT 37
IS+LPD I+ HILS +PTK A+RTS+LSK W Y W+
Sbjct: 13 ISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWS 48
>AT5G56380.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22838836-22840353
REVERSE LENGTH=439
Length = 439
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 6/166 (3%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGR----YSNRIVRR 57
IS+L D I+ ILSFL TKD ++T +LSK + +W + L F+D+ + +
Sbjct: 4 ISHLADEILSKILSFLGTKDVMQTMLLSKRFKSQWLLVPKLEFDDSTHLPETWGYQEPDY 63
Query: 58 NLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKLTL 117
F FV R LL + + W+ + V RG+ +L + +
Sbjct: 64 GNFRRFVDRSLLSREGRVLQTLFLKLGRQCSYDDIAIWVGIAVKRGLMELKLKYTDSYYP 123
Query: 118 SSHSIMK--YKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF 161
S+ + Y +VL + + VP CL SL L+L + +
Sbjct: 124 KRSSLPRSLYTCETLVVLKLKKGYLDVPDLVCLRSLKTLSLRDMNY 169
>AT1G32020.1 | Symbols: | F-box family protein |
chr1:11512552-11513067 REVERSE LENGTH=171
Length = 171
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDL-----HFEDTGRYSNRIVR 56
IS LPD ++ I+S+L KD+++TSVLSK W + W + L F G S +V
Sbjct: 6 ISTLPDHLVAKIVSYLGIKDSIKTSVLSKRWEFVWLKVVGLDLKNCDFPPNGIASQMVVN 65
Query: 57 RNL-FLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKL 115
+ + F S ++ +N E WI+ V RGV+ L ++N +
Sbjct: 66 KYMEFNSGLHMQYFKVNFGGNTVCTNRFLE---------WIATAVDRGVQHLDAENKNPV 116
Query: 116 TLSS---HSIMKYKSLEQLVLCV 135
+ I K K+L L L +
Sbjct: 117 IIKEFMPKKIYKSKTLVSLKLAI 139
>AT3G58980.1 | Symbols: | F-box family protein |
chr3:21794445-21797006 REVERSE LENGTH=594
Length = 594
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
ISNLP+ II HI+SFL K+A S+LSK W +T + L F+D+ + +
Sbjct: 4 ISNLPNEIICHIVSFLSAKEAAFASILSKRWRNLFTIVIKLQFDDSVKNEGSLK------ 57
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQW---ISVVVSRGVKKL----CVNSENK 114
FV VL +++P H D + I ++ RG+ L C
Sbjct: 58 DFVDGVLALPTSSRVRSCSLECRREFDPTHYDDFNRCICALLKRGILDLKLDICAGRRYS 117
Query: 115 LTLSSHSIMKYKSLEQLVLCVVGCEIK------VPTTACLSSLTVLNLSGIEF 161
L L + K+L +L L G + VP A L +L L L+ I F
Sbjct: 118 LPL---EVFTCKTLVKLEL---GSDFGGFVVDLVPEDAFLPALETLLLNYIRF 164
>AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18177676-18179339 FORWARD LENGTH=415
Length = 415
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 29/222 (13%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS L + ++ HI+S LPTK V TSVLSK W + W + +L F +Y F
Sbjct: 13 ISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKF--VSKY------HQTFS 64
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKLTLSSHS 121
VYR + + + L + + +R V+ L ++ + S
Sbjct: 65 EDVYRFFMLHKAPFLESLDLEFSNQLDASDLGILVGIAFARHVRNLVLDLDYYSNFSQLC 124
Query: 122 IMKY----------KSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSGK 171
++ K+LE L L + P CL SL L+L + F+G S
Sbjct: 125 AARFPSGLCIYDNNKTLETLTL-KHSILLYFPYRVCLKSLRKLHLYKVHFYGKDS--VYN 181
Query: 172 LHLDFPVLR---TYKTTDCTWSPRIKCVTLKAPLLEVVSIKD 210
L P LR ++ +C ++ T+ P LE ++I+D
Sbjct: 182 LLCGCPSLRDLIVHRYREC-----METFTIAVPSLERLTIED 218
>AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein |
chr4:8080118-8081669 REVERSE LENGTH=459
Length = 459
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 17/118 (14%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRR---- 57
+ NLPD ++ IL LPTKD V+ SVLS+ W W ++ L E G + +VR
Sbjct: 21 LRNLPDCLLFKILLNLPTKDVVKLSVLSRRWRNVWRYVPGLDLE-CGDF---MVREYYDS 76
Query: 58 ---NLFLSFVYRVLLYLNXXXXXXXXXXXXEKY-----EPCHLDQWISVVVSRGVKKL 107
N L FVYR L + N Y E H +W + VV R V+ L
Sbjct: 77 SEFNALLGFVYRFLGF-NSESCLQKFKLTVNWYDDVQLETVHFTEWFNAVVKRKVQHL 133
>AT4G10410.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr4:6448983-6449998 REVERSE LENGTH=263
Length = 263
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 11/199 (5%)
Query: 14 LSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFLSFVYRVLLYLNX 73
+S PTK AV TS+LSK W + W ++T L F D + FL + L+
Sbjct: 1 MSLAPTKVAVSTSILSKRWEFLWMWLTKLEFGDELYSESEFKSLQCFLD--RNLPLHRAP 58
Query: 74 XXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVNSENKLTLSSHSIMKYKSLEQLVL 133
+ P + W+ VVVSR V++L + K + S+ KSL L L
Sbjct: 59 VIESFRLELSGLYFNPEDIRMWVVVVVSRYVRELEIYCPEKQHILPSSLYTCKSLVILKL 118
Query: 134 CVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSGKLHLDFPVLRTYKTTDCTWSPRI 193
G + VP CL SL L L G + + + +D P L +K D +
Sbjct: 119 D-GGIILDVPPMVCLPSLRTLELKGY------TCDVDEFVIDTPSLEYFKLEDRNYDSH- 170
Query: 194 KCVTLKAPLLEVVSIKDVR 212
C+ P L V + DVR
Sbjct: 171 PCLIENMPKLTVAYV-DVR 188
>AT3G03040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:684685-686277 FORWARD LENGTH=472
Length = 472
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT--------GRYSN 52
++S+LPD + ILSFL TK++ TSVLSK W + + +L F+D+ R +
Sbjct: 3 LLSSLPDEVRCLILSFLTTKESASTSVLSKKWRNLFALVPNLDFDDSEFLHPEEGKRERD 62
Query: 53 RIVRRNLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL 107
I++ F+ FV RVL P +++W+ V+ R V +
Sbjct: 63 GILQS--FMDFVDRVLSLQGNSSIRKFSLKCETGVPPARVNRWLCEVLQRDVSDI 115
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
+S LPD + ILS+LPTKD + TS+LSK W + WT + L++ D + N R F
Sbjct: 8 LSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNY-DLRLHDNTCPR---FS 63
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLD--QWISVVVSRGVKKLCV---NSENKLT 116
FV R LL D W+ + V R V++L V + E +
Sbjct: 64 QFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEPIR 123
Query: 117 LS----SHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTS 166
L + S + LE + L C + C SL L+L +++ S
Sbjct: 124 LPKCLFTCSTLAVLKLENITLEDASCYV------CFQSLKTLHLLDVKYLDDQS 171
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
+S LPD + ILS+LPTKD + TS+LSK W + WT + L++ D + N R F
Sbjct: 8 LSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNY-DLRLHDNTCPR---FS 63
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLD--QWISVVVSRGVKKLCV---NSENKLT 116
FV R LL D W+ + V R V++L V + E +
Sbjct: 64 QFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEPIR 123
Query: 117 LS----SHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTS 166
L + S + LE + L C + C SL L+L +++ S
Sbjct: 124 LPKCLFTCSTLAVLKLENITLEDASCYV------CFQSLKTLHLLDVKYLDDQS 171
>AT5G56400.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr5:22846069-22847615 REVERSE LENGTH=455
Length = 455
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 2 ISNLPDFIIGHILSFLPT-KDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLF 60
IS+LP+ ++ HILS LPT D V TS +SK W WT + L F D Y + R + F
Sbjct: 35 ISDLPEDLLVHILSLLPTTNDIVATSGVSKRWESLWTKVHKLRFNDRI-YDGK--RYDSF 91
Query: 61 LSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCVN--SENKLTLS 118
L FV + L+ K + WI + + R + +L + ++
Sbjct: 92 LHFVEKSLILHKAPTLVSLRLSVGPKCTADDIGLWIKLALDRNICELIIKHYPDHGHIRL 151
Query: 119 SHSIMKYKSLEQLVL--CVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTS 166
S + K+L L L ++G I +PT C SL L+L +++ G S
Sbjct: 152 SRRLCDSKTLVSLKLKNAILGA-IWLPT--CFISLKTLHLRYVKYSGDES 198
>AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:137404-138888 FORWARD
LENGTH=441
Length = 441
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 3 SNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFE 45
S LPD ++ +LSFLPTKDAVRTS+LS W W ++ L ++
Sbjct: 5 SQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYD 47
>AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7551632-7553219
REVERSE LENGTH=466
Length = 466
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFIT--DLHFEDTGRYSNRIVRRN 58
+IS LPD +I IL +LP KD VRTS LS W W I DL E+ Y+ + N
Sbjct: 29 LISKLPDSLITQILLYLPIKDIVRTSSLSSRWKSLWLLIPRLDLDSEEFQDYNAFVGFMN 88
Query: 59 LFLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKLCV 109
F+ F + L+ PC + +WI VV R +K L V
Sbjct: 89 KFIDFSGEEKICLDKLKLSSRKTVND---LPC-VTRWIDFVVRRKLKHLDV 135
>AT2G42720.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr2:17785653-17787211 FORWARD LENGTH=443
Length = 443
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 91/220 (41%), Gaps = 20/220 (9%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS+LPD I+ HILSFL TK+A TS LS W + F+ LH + ++ N F+
Sbjct: 4 ISSLPDEILEHILSFLSTKEAALTSSLSTRWKNVFVFVPSLHLDYARQHEN----PREFI 59
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKY--------EPCHLDQWISVVVSRGVK---KLCVN 110
FV V N + + H+ WI V+SRG L +
Sbjct: 60 DFVDFVNTLFNRKGNSPIKKLALKIHLKDNQSLQNQTHVQSWIHRVLSRGGVTDLDLFIT 119
Query: 111 SENKLTLSSHSIMKYKSLEQLVLCVVGCEIKV-PTTACLSSLTVLNLSGIEFFGGTSNNS 169
+ K L I K +L +L L G IK+ L L L L ++ F G N
Sbjct: 120 FKGKFQLVPLLIFKSNTLVKLRLG-RGFTIKLCHENVYLPMLKTLCLDTVD-FDGDHNVF 177
Query: 170 GKLHLDFPVLRTYKTTDCTWSPRIKCVTLKAPLLEVVSIK 209
L P+L D W + C ++ +P L+ + I+
Sbjct: 178 ETLLPRCPLLEELVLEDQRW--KQWCGSVSSPSLKRLRIR 215
>AT2G26860.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:11452196-11453584
REVERSE LENGTH=405
Length = 405
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 18/189 (9%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS LPD ++ IL LPTK+ V TS+LSK W + W ++ L F S+ ++
Sbjct: 4 ISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPIQ----- 58
Query: 62 SFVYRVLLYLNXXXXXXXXXX-XXEKYEPCHLDQWISVVVSRGVKKLCVNS------ENK 114
F+ + L L ++P + W+ +SR V++L +N +
Sbjct: 59 DFITKNLRLLKPQVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDLSWLDKP 118
Query: 115 LTLSSHSIMKYKSLEQLVLCVVGCEI--KVPTTACLSSLTVLNLSGIEFFGGTSNNSGKL 172
+ L Y + L ++G I VP T L L L L + + ++ S +L
Sbjct: 119 VVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSVAY---SNEESLRL 175
Query: 173 HLDF-PVLR 180
L + PVL
Sbjct: 176 LLSYCPVLE 184
>AT5G02920.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:680541-681317 FORWARD LENGTH=258
Length = 258
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 2 ISNLPDFIIGHILSFLP-TKDAVRTSVLSKSWTYRWTFITDLHFE 45
ISNLPD I+ HILSF+P T +RTSVLSK W + W+ L FE
Sbjct: 30 ISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHLSFE 74
>AT3G58960.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:21787146-21788807
REVERSE LENGTH=475
Length = 475
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 99/240 (41%), Gaps = 9/240 (3%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS+L + II +I+SFL KDA SVLSK W +T + +L F++T + FL
Sbjct: 4 ISSLSNDIISNIVSFLSAKDAAVASVLSKRWQNIYTIVPNLEFDNTLENQGSLTD---FL 60
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGVKKL----CVNSENKLTL 117
+ + + L++++ V+ RGV KL V + + +L
Sbjct: 61 NGLLALPASTRIKNVSIKRRGRDGPNRDADLNRFLCNVLKRGVLKLKLDIWVTLDGRYSL 120
Query: 118 SSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSGKLHLDFP 177
+ K+L +L L + VP A L +L L + ++F + KL P
Sbjct: 121 PVE-VFTCKTLVELELGSILQIDLVPENALLPALKTLIIDAVQFSDQSGCAFQKLLSSCP 179
Query: 178 VLRTYKTTDCTWSPRIKCVTLKAPLLEVVSIKDVRHRLPPSNESHTAMNFCASSLTKFTY 237
VL + + W + +P LE +++ R+ + + F SLT Y
Sbjct: 180 VLVELRMLNVQWEHWQWSRRVSSPTLEKLTMNH-RYHFGNTYYDMEGITFDTPSLTSLKY 238
>AT1G48400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:17882136-17883855
REVERSE LENGTH=513
Length = 513
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 113/270 (41%), Gaps = 38/270 (14%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTG-RYSNRIVRRN-- 58
ISNLPD I+G ILS LPTK A TSVLSK W + +L F+++ Y N +
Sbjct: 12 ISNLPDEILGKILSLLPTKVAASTSVLSKRWRNLLGLVDNLCFDESMVVYPNEEEETSGS 71
Query: 59 -LFLSFVYRVLLYLNXXXXXXXXXXXXEKYE---PCHLDQWISVVVSRGVKKLCVNS--- 111
F FV + L+ KY + +WI V+ RG+ ++ +++
Sbjct: 72 LRFCDFVDKTFALLSNSHIKKFSLSRVYKYNDDVDGMVRRWIRTVMERGLLEIHLHATPM 131
Query: 112 -----ENKLTLSSHSIMKYKSLEQLVLCVVGCE-IKVPTTACLSSLTVLNLSGIEFFGGT 165
E KL L+S++++K L C V E + P LS ++L G
Sbjct: 132 SFVAIETKL-LTSNTLVK---LTLSARCFVEVERVFFPALKSLSLFSIL---------GD 178
Query: 166 SNNSGKLHLDFPVLRTYKTTDCTWS-PRIKCVTLKAPLLEVVSIKDVRHRLPPSNES--H 222
N +L PVL D + R+ C T +E S+K + NE H
Sbjct: 179 YTNYIRLIDGCPVLEELYMRDGDYPFLRLTCGT----NVESASLKRLVIFTHNPNEMIWH 234
Query: 223 TAMNFCASSLTKFTYKGCLSP--DTIVFDL 250
+ F A SL Y +S D + FDL
Sbjct: 235 ELIYFEAPSLVYLDYSSYVSAKYDVVDFDL 264
>AT5G54820.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:22269859-22271777 FORWARD LENGTH=472
Length = 472
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
+S+LPD ++ I+SFLP K+ VRTSVLSK W Y T+L F+++ + I
Sbjct: 9 LSSLPDILLIMIISFLPLKECVRTSVLSKRWRYLCLETTNLSFKESDYVNPDITDAEYSR 68
Query: 62 SFVYRVLLYLNXXXXXXXXXXXXEKYEPC---------HLDQWISVVVSRGVKKLCVNSE 112
YR E +E C +D I VS VK L V+
Sbjct: 69 IVAYRSFFCSVDKWVSITQHQVVESFEICFSHLVGFEDKIDALIEYAVSTRVKNLVVDLS 128
Query: 113 N 113
N
Sbjct: 129 N 129
>AT2G26860.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:11452421-11453584
REVERSE LENGTH=355
Length = 355
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 18/189 (9%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLFL 61
IS LPD ++ IL LPTK+ V TS+LSK W + W ++ L F S+ ++
Sbjct: 4 ISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPIQ----- 58
Query: 62 SFVYRVLLYLNXXXXXXXXXX-XXEKYEPCHLDQWISVVVSRGVKKLCVNS------ENK 114
F+ + L L ++P + W+ +SR V++L +N +
Sbjct: 59 DFITKNLRLLKPQVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDLSWLDKP 118
Query: 115 LTLSSHSIMKYKSLEQLVLCVVGCEI--KVPTTACLSSLTVLNLSGIEFFGGTSNNSGKL 172
+ L Y + L ++G I VP T L L L L + + ++ S +L
Sbjct: 119 VVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSLPCLKTLELDSVAY---SNEESLRL 175
Query: 173 HLDF-PVLR 180
L + PVL
Sbjct: 176 LLSYCPVLE 184
>AT3G59150.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21872729-21874422 FORWARD LENGTH=509
Length = 509
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYS-NRIVRRNL 59
+ISNLP+ ++ ILS+L TK+A TS+LSK W+ I L F+D+ + R+N+
Sbjct: 48 VISNLPNDLLCRILSYLSTKEAALTSILSKRWSNLLLSIPILDFDDSVLLKPQKGQRKNV 107
Query: 60 FL-SFVYRVL---LYLNXXXXXXXXXXXXEKYEPCHLDQWI-SVVVSRGVKKLCVNSENK 114
F +FV R+L + + EP + +WI + V GV L + +
Sbjct: 108 FFKAFVDRLLSQRVETSSHVQRVSLKCRQGGVEPDCVIKWILTTVRDLGVLDLSLCIDFG 167
Query: 115 LTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEFFGGTSNNSGKLHL 174
+ ++ + K+L +L + + + P+ +L L L +EF G ++ L
Sbjct: 168 IFHLPFNVFRSKTLVKLRIGTMIRLSQFPSDVVSPTLNSLVLDLVEFRDGDKVEFRQILL 227
Query: 175 DFPVLRTYKTTDCT----WSPRIKCVTLKA 200
FP L++ + + W+ TLK+
Sbjct: 228 AFPSLQSLRVHESNKWKFWNGSASSRTLKS 257
>AT5G44490.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr5:17924035-17925843 FORWARD LENGTH=455
Length = 455
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLF 60
++S L D +I +L +LPTK+AV TSVLS W W I DL + SN N F
Sbjct: 18 LMSKLTDALISQVLFYLPTKEAVSTSVLSSRWKSVWLLIPDLDLNSSAFPSN-----NAF 72
Query: 61 LSFV 64
+ F+
Sbjct: 73 VGFI 76
>AT1G47915.1 | Symbols: | F-box family protein |
chr1:17660752-17660973 FORWARD LENGTH=73
Length = 73
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT 47
ISNLPD I+G ILS LPTK A TSVLSK W + +L F+++
Sbjct: 10 ISNLPDEILGKILSLLPTKVAASTSVLSKRWRNLLGLVDNLCFDES 55
>AT5G62970.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr5:25272033-25273537 FORWARD LENGTH=449
Length = 449
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 26/185 (14%)
Query: 7 DFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLF------ 60
D ++ ILSFLP K A+ TSVLSK W + W + L +++ YS R
Sbjct: 10 DELLVKILSFLPFKFAITTSVLSKQWKFLWMRVPKLEYDEDSMYSFEYSFRYFLPKAKEV 69
Query: 61 ---------------LSFVYRVL-LYLNXXXXXXXXXXXXEKYEPCHLDQWISVVVSRGV 104
SF+ + L L+ + E ++P + W+ + VSR
Sbjct: 70 DSETYSIVSESGHRMRSFIEKNLPLHSSPVIESLRLKFFTEVFQPEDIKLWVEIAVSRCA 129
Query: 105 KKLCVN---SENKLTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF 161
++L V+ E L ++ KSL L L + VP L SL +L+L + +
Sbjct: 130 QELSVDFFPKEKHNALLPRNLYTCKSLVTLKL-RNNILVDVPHVFSLPSLKILHLERVTY 188
Query: 162 FGGTS 166
G S
Sbjct: 189 GDGES 193
>AT3G42770.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:14867122-14870083
FORWARD LENGTH=532
Length = 532
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 5 LPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNL----- 59
LPD ++ ILSFLPTK+A TS+LSK W +T +L F+++ ++ + N+
Sbjct: 4 LPDELLVQILSFLPTKEATSTSLLSKRWRTLFTLSPNLDFDNSLLLQSKKRKWNMRNIQK 63
Query: 60 -FLSFVYRVLLYLNXXXXXXXXXXXXEKYEPCH----LDQWISVVVSRGVKKLC--VNSE 112
F+ FV L E + +++WI + GV +L ++
Sbjct: 64 SFVGFVDSTLALQGGKGIKSFSLKFKETLGDVNGEVDVNRWICNALEHGVSELHLRIDYT 123
Query: 113 NKLTLSSHSIMKYKSLEQLVLCVVGCEIKVPTTACLSSLTVLNLSGIEF 161
+ L S I L +L L C VP L SL VL L I F
Sbjct: 124 KRCHLPSE-IFTSTKLVKLSLVTQSCFPVVPNCISLPSLKVLFLDSIWF 171
>AT3G58950.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21784116-21785840 REVERSE LENGTH=417
Length = 417
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYSNRIVRRNLF 60
+ S+LPD ++ HILSFL TK+A SV+SK W ++ + +L ++ G+ + + F
Sbjct: 3 LFSSLPDEVLCHILSFLTTKEAALASVVSKRWRNQFALVPNLDIDEEGKREREEILLS-F 61
Query: 61 LSFVYRVLLYLNXXXXXXXXXXXXEKYEPCHLDQW 95
+ FV VL P LD W
Sbjct: 62 MDFVDNVLALQADSPIKKFSLKCKTGVHPRRLDAW 96
>AT3G03360.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:795218-796918 FORWARD LENGTH=481
Length = 481
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 1 MISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDTGRYS---NRIVRR 57
+IS LPD I+ ILS+LPT+ A++TSVLS+ W + W+ L F + NRI+ R
Sbjct: 38 LISRLPDDILQLILSYLPTRLAIKTSVLSRRWRHVWSDTWSLSFHRDRPDAPCINRILDR 97
Query: 58 NLFLSFVYRVLLYLNXXXXXXXXXXXXEKYEP-CHLDQWISVVVSRGVKKL 107
YR ++ + + +D WI+ +SR V+ L
Sbjct: 98 -------YRAPKMMSFRICSCCRAACISRPDTHADIDSWINFAMSRNVENL 141
>AT3G58920.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21776293-21777988 FORWARD LENGTH=470
Length = 470
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 2 ISNLPDFIIGHILSFLPTKDAVRTSVLSKSWTYRWTFITDLHFEDT 47
ISNLP+ II HI+SFL K+A SVLSK W +T + L F+D+
Sbjct: 4 ISNLPNEIICHIVSFLSAKEAAFASVLSKRWQNLFTIVQKLEFDDS 49