Miyakogusa Predicted Gene
- Lj2g3v1510870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1510870.1 Non Chatacterized Hit- tr|A5BLG5|A5BLG5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.83,5e-18,PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING
PROTEIN,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptid,CUFF.37323.1
(605 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 669 0.0
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 467 e-132
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 433 e-121
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 433 e-121
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 432 e-121
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 420 e-117
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 417 e-116
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 407 e-114
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 406 e-113
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 405 e-113
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 404 e-113
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 401 e-112
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 401 e-112
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 396 e-110
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 391 e-109
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 388 e-108
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 386 e-107
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 383 e-106
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-105
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 379 e-105
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 377 e-104
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 374 e-104
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 374 e-104
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 372 e-103
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 367 e-102
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 365 e-101
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 363 e-100
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 361 e-99
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 3e-99
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 4e-99
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 1e-98
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 2e-98
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 5e-98
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 6e-98
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 6e-98
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 1e-96
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 1e-96
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 343 2e-94
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 4e-94
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 8e-94
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 338 5e-93
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 338 8e-93
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 336 3e-92
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 6e-91
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 4e-89
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 325 5e-89
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 1e-88
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 316 3e-86
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 8e-86
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 5e-84
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 5e-83
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 295 8e-80
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 3e-79
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 290 1e-78
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 1e-77
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 283 2e-76
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 7e-76
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 1e-72
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 262 4e-70
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 253 2e-67
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 253 3e-67
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 249 5e-66
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 9e-65
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 241 8e-64
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 2e-63
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 2e-63
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 2e-62
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 2e-62
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 9e-62
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 232 5e-61
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 7e-61
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 4e-60
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 2e-59
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 226 2e-59
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 6e-59
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 8e-58
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 216 5e-56
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 7e-56
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 1e-54
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 3e-54
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 7e-54
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 4e-53
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 1e-52
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 4e-50
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 195 9e-50
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 8e-49
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 188 1e-47
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 7e-47
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 7e-46
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 7e-45
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 7e-44
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 2e-42
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 6e-40
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 9e-40
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 1e-32
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 89 9e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 7e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 1e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 79 7e-15
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 79 1e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 74 3e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 72 8e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 66 6e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 66 6e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 65 2e-10
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 64 3e-10
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 63 5e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 61 2e-09
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 57 4e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 56 7e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 54 2e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 5e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 53 6e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 50 5e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/577 (55%), Positives = 430/577 (74%), Gaps = 2/577 (0%)
Query: 31 EQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLV-ATCALAKW-GSMEYACSIF 88
EQ LLKRC +++EFKQVHA +KL F S ++ V A CA + W SM YA SIF
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 89 RQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVK 148
R I++P +F++NTMIRG V++M+ G PDNF YP LLKAC+ L ++
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 149 EGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
EG QIHG VFK G+ D+FVQN LI+MYG+CG ++ + VFEK++ K+ ASWS+++ A A
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARA 209
Query: 209 CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNV 268
MW +CL+L M E + +AEES +VS L AC + G+ NLG IHG LLRNISELN+
Sbjct: 210 GMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNI 269
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
+V+TSL+DMYVK GC++K + +FQ M +++ +Y+ MISGL++HG G AL++FS++++E
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
GL PD VVYV VL+ACSH+GLV EG + F M E K++PT +HYGC+VDLLGRAG+L E
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 389 AYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYAR 448
A I+S+PI+ NDV+WR+ LS C+V N+E+G+IAA++L L+ +NPGDYL+++N+Y++
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 449 AHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQ 508
W+DVAR R E+A K L QTPGFS+VE + K ++FVSQDRS P+ IY M+HQMEWQ
Sbjct: 450 GQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQ 509
Query: 509 LEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDC 568
L+FEGY PD +Q+LL+VDE+EK+ERLK HSQK+AIAF L++T GS ++I+RNLR+CSDC
Sbjct: 510 LKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDC 569
Query: 569 HTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
HTYTK IS I EREI VRDR RFH FK G CSCKDYW
Sbjct: 570 HTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/584 (39%), Positives = 364/584 (62%), Gaps = 15/584 (2%)
Query: 36 PLLKRC---------KSMEEFKQVHAHVLKLGF-FCDSFCGSNLV-ATCALAKWGSMEYA 84
P++++C S+ + +Q+HA ++ G D+ G +L+ +L M YA
Sbjct: 13 PMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYA 72
Query: 85 CSIFRQIEEP-GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXG-IGPDNFIYPFLLKACS 142
+F +IE+P F +NT+IRG I N G + PD YPFL+KA +
Sbjct: 73 HKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVT 132
Query: 143 LLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSA 202
+ V+ G IH V ++G G I+VQN L+ +Y CG + A VF+KM EK + +W++
Sbjct: 133 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 192
Query: 203 IIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN 262
+I A + L L +M+ +G + + T+VS+LSAC +G+ LG+ +H +++
Sbjct: 193 VINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 263 ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVF 322
N+ L+D+Y + G +E+ +F M +K+ S+T +I GL+++G G EA+++F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 323 SEILE-EGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLG 381
+ EGL P ++ +VG+L ACSH G+V EG + F+ M+ E+KI+P ++H+GCMVDLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 382 RAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLV 441
RAG +++AY IKSMP++PN V+WR+LL AC VH + ++ E A ++ L PN+ GDY++
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 442 LANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNM 501
L+NMYA +W+DV +IR++M + + PG S+VE +V++F+ D+S P+ D IY
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 502 IHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRN 561
+ +M +L EGY P S V +DV+E+EK + +HS+K+AIAF LI T E SP+ + +N
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 562 LRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
LR+C+DCH K +SK+ REI VRDR RFHHFK+G+CSC+DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/602 (38%), Positives = 344/602 (57%), Gaps = 36/602 (5%)
Query: 38 LKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGS-MEYACSIFRQIEEPGS 96
L+RC EE KQ+HA +LK G DS+ + ++ C + + YA +F + P +
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDN-FIYPFLLKACSLLGGVKEGIQIHG 155
F +N MIRG S + P N + +P LLKACS L +E QIH
Sbjct: 81 FLWNLMIRG-FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139
Query: 156 HVFKAGVGDDIFVQNGLISMYG-------------------------------KCGAIKH 184
+ K G +D++ N LI+ Y K G +
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 185 ACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI 244
A +F KM EK+ SW+ +I + A+M + L L +M + + +L + LSAC
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-QNSDVEPDNVSLANALSACA 258
Query: 245 HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
LG+ G+ IH L + ++ V+ LIDMY K G +E+ + VF+N+ +KS ++T
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
+ISG + HGHG EA+ F E+ + G+ P+ + + VL+ACS+ GLV EG F +M+ ++
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 365 KIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIA 424
+KPT++HYGC+VDLLGRAG+L EA I+ MP+KPN V+W +LL AC++H N+E+GE
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 425 AEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYK 484
E L ++P + G Y+ AN++A KW+ A RR M ++ + + PG S + E ++
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 485 FVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKH-HSQKLAI 543
F++ DRS PE + I + M +LE GY P+ ++LLD+ +D++RE + H HS+KLAI
Sbjct: 499 FLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAI 558
Query: 544 AFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKD 603
+ LI T G+ +RI +NLR+C DCH TK ISKI +R+I +RDR RFHHF+DG CSC D
Sbjct: 559 TYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGD 618
Query: 604 YW 605
YW
Sbjct: 619 YW 620
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/603 (38%), Positives = 352/603 (58%), Gaps = 35/603 (5%)
Query: 37 LLKRC---KSMEEFKQVHAHVLKLGFFCDSFCGSNL------------------------ 69
+LK C K+ +E +Q+H HVLKLG D + ++L
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 70 -VATCAL----AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXX 124
V+ AL A G +E A +F +I +N MI G N
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 125 XGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKH 184
+ PD ++ AC+ G ++ G Q+H + G G ++ + N LI +Y KCG ++
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 185 ACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI 244
AC +FE++ K V SW+ +IG + ++ + L+L +M R G + T++S+L AC
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACA 378
Query: 245 HLGSPNLGRCIHGILLRNISELNVV--VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSY 302
HLG+ ++GR IH + + + + ++TSLIDMY K G IE VF ++ KS S+
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 303 TVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQF 362
MI G ++HG + +FS + + G+ PDD+ +VG+LSACSH+G+++ G F+ M
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGE 422
++K+ P ++HYGCM+DLLG +G+ +EA +I M ++P+ V+W SLL ACK+H N+E+GE
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 423 IAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKV 482
AE L + P NPG Y++L+N+YA A +WN+VA+ R + DK + + PG S +E + V
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 483 YKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLA 542
++F+ D+ P IY M+ +ME LE G+ PDTS+VL +++E+ K L+HHS+KLA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 543 IAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCK 602
IAF LI T G+ + I +NLR+C +CH TK ISKI +REI RDR RFHHF+DG CSC
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 603 DYW 605
DYW
Sbjct: 739 DYW 741
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 223/478 (46%), Gaps = 73/478 (15%)
Query: 11 HLLSLPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLV 70
H L S PP S LL CK+++ + +HA ++K+G ++ S L+
Sbjct: 18 HFLPSSSDPPYDS-----IRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLI 72
Query: 71 ATCALAK-WGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
C L+ + + YA S+F+ I+EP +NTM RG+ + G+ P
Sbjct: 73 EFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLP 132
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
+++ +PF+LK+C+ KEG QIHGHV K G D++V LISMY + G ++ A VF
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 190 EK----------------------------MDE---KSVASWSAIIGAHACAEMWHQCLM 218
+K DE K V SW+A+I +A + + L
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 219 LLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMY 278
L DM + + R +EST+V+V+SAC GS LGR +H + + N+ + +LID+Y
Sbjct: 253 LFKDMMKT-NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
Query: 279 VKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYV 338
K G +E +F+ + K S+ +I G + EAL +F E+L G P+DV +
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 371
Query: 339 GVLSACSHAGLVNEG----------LQCFKN-----------------MQFEHKIKPTVQ 371
+L AC+H G ++ G L+ N ++ H++ ++
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 372 H-----YGCMV---DLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIG 421
H + M+ + GRA + + ++ + I+P+D+ + LLSAC L++G
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/621 (36%), Positives = 356/621 (57%), Gaps = 51/621 (8%)
Query: 35 YPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKW--GSMEYACSIFRQIE 92
+P + C+++ + Q+HA +K G D+ + ++ CA + ++YA IF Q+
Sbjct: 27 FPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 93 EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXG---IGPDNFIYPFLLKACSLLGGVKE 149
+ F +NT+IRG + P+ F +P +LKAC+ G ++E
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA------------------------ 185
G QIHG K G G D FV + L+ MY CG +K A
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 186 -----------------CD----VFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
C +F+KM ++SV SW+ +I ++ + + + +M
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM- 265
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
++G R TLVSVL A LGS LG +H + ++ V+ ++LIDMY K G I
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 285 EKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC 344
EK + VF+ + ++ +++ MI+G +IHG +A+ F ++ + G+ P DV Y+ +L+AC
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Query: 345 SHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV 404
SH GLV EG + F M ++P ++HYGCMVDLLGR+G+L EA I +MPIKP+DV+
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI 445
Query: 405 WRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMAD 464
W++LL AC++ N+E+G+ A L + P++ G Y+ L+NMYA W++V+ +R M +
Sbjct: 446 WKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
Query: 465 KHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLD 524
K + + PG S+++ + +++FV +D S P+ I +M+ ++ +L GY+P T+QVLL+
Sbjct: 506 KDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLN 565
Query: 525 VDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREIT 584
++E++K L +HS+K+A AF LI TS G P+RI +NLR+C DCH+ K ISK+ +R+IT
Sbjct: 566 LEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKIT 625
Query: 585 VRDRFRFHHFKDGACSCKDYW 605
VRDR RFHHF+DG+CSC DYW
Sbjct: 626 VRDRKRFHHFQDGSCSCMDYW 646
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/633 (37%), Positives = 360/633 (56%), Gaps = 49/633 (7%)
Query: 15 LPSTPPQCSELSTRFNEQGWYP-------LLKRCKSMEEFKQVHAHVLKLGFFC-DSFCG 66
L ++ PQ ++LST + P L+ + +S++E Q+HA +L+ +
Sbjct: 7 LATSLPQ-NQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPV 65
Query: 67 SNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXG 126
NL A A G + ++ ++F Q +P F + I N + +N
Sbjct: 66 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAI--NTASINGLKDQAFLLYVQLLS 123
Query: 127 --IGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKH 184
I P+ F + LLK+CS K G IH HV K G+G D +V GL+ +Y K G +
Sbjct: 124 SEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVS 179
Query: 185 ACDVFEKMDEKS-------------------------------VASWSAIIGAHACAEMW 213
A VF++M E+S + SW+ +I +A
Sbjct: 180 AQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFP 239
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
+ LML + EG + +E T+V+ LSAC +G+ GR IH + + LNV V T
Sbjct: 240 NDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTG 299
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILE-EGLAP 332
LIDMY K G +E+ V VF + K ++ MI+G ++HG+ +AL++F+E+ GL P
Sbjct: 300 LIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQP 359
Query: 333 DDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL 392
D+ ++G L AC+HAGLVNEG++ F++M E+ IKP ++HYGC+V LLGRAG L+ AY
Sbjct: 360 TDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYET 419
Query: 393 IKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKW 452
IK+M + + V+W S+L +CK+H + +G+ AE L LN N G Y++L+N+YA +
Sbjct: 420 IKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDY 479
Query: 453 NDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFE 512
VA++R M +K +V+ PG S +E E KV++F + DR + IY M+ ++ +++
Sbjct: 480 EGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSH 539
Query: 513 GYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYT 572
GY P+T+ VL D++E EK + L+ HS++LAIA+ LI T GSP++I +NLR+CSDCHT T
Sbjct: 540 GYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVT 599
Query: 573 KFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
K ISKI R+I +RDR RFHHF DG+CSC D+W
Sbjct: 600 KLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/606 (35%), Positives = 343/606 (56%), Gaps = 38/606 (6%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCA-----LAKWGSMEYACSIFRQI 91
LL+ C S + K +H +L+ D F S L+A C + YA IF QI
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77
Query: 92 EEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGI 151
+ P F +N +IR + I PDN +PFL+KA S + V G
Sbjct: 78 QNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGE 137
Query: 152 QIHGHVFKAGVGDDIFVQNGLISMYG-------------------------------KCG 180
Q H + + G +D++V+N L+ MY KCG
Sbjct: 138 QTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCG 197
Query: 181 AIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVL 240
+++A ++F++M +++ +WS +I +A + + + L M REG A E+ +VSV+
Sbjct: 198 MVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG-VVANETVMVSVI 256
Query: 241 SACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRF 300
S+C HLG+ G + ++++ +N+++ T+L+DM+ + G IEK + VF+ + E
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL 316
Query: 301 SYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM 360
S++ +I GL++HGH +A+ FS+++ G P DV + VLSACSH GLV +GL+ ++NM
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 361 QFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEI 420
+ +H I+P ++HYGC+VD+LGRAG L EA I M +KPN + +LL ACK++ N E+
Sbjct: 377 KKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEV 436
Query: 421 GEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAER 480
E L + P + G Y++L+N+YA A +W+ + +R M +K + + PG+S++E +
Sbjct: 437 AERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDG 496
Query: 481 KVYKF-VSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQ 539
K+ KF + D+ PE I ++ ++ GYK +T DVDE+EK + HS+
Sbjct: 497 KINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSE 556
Query: 540 KLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGAC 599
KLAIA+ ++ T G+ +RI +NLR+C DCHT TK IS++ RE+ VRDR RFHHF++G C
Sbjct: 557 KLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVC 616
Query: 600 SCKDYW 605
SC+DYW
Sbjct: 617 SCRDYW 622
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/463 (42%), Positives = 307/463 (66%), Gaps = 2/463 (0%)
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI 203
+ V+ G IH V ++G G I+VQN L+ +Y CG + A VF+KM EK + +W+++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNI 263
I A + L L +M+ +G + + T+VS+LSAC +G+ LG+ +H +++
Sbjct: 61 INGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
N+ L+D+Y + G +E+ +F M +K+ S+T +I GL+++G G EA+++F
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 324 EILE-EGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGR 382
+ EGL P ++ +VG+L ACSH G+V EG + F+ M+ E+KI+P ++H+GCMVDLL R
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 383 AGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVL 442
AG +++AY IKSMP++PN V+WR+LL AC VH + ++ E A ++ L PN+ GDY++L
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLL 299
Query: 443 ANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMI 502
+NMYA +W+DV +IR++M + + PG S+VE +V++F+ D+S P+ D IY +
Sbjct: 300 SNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKL 359
Query: 503 HQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNL 562
+M +L EGY P S V +DV+E+EK + +HS+K+AIAF LI T E SP+ + +NL
Sbjct: 360 KEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNL 419
Query: 563 RLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
R+C+DCH K +SK+ REI VRDR RFHHFK+G+CSC+DYW
Sbjct: 420 RVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
+ +H+ V++ GF + ++L+ A G + A +F ++ E +N++I G
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHL--YANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
GI PD F LL AC+ +G + G ++H ++ K G+ ++
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
N L+ +Y +CG ++ A +F++M +K+ SW+++I A + + L M
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 228 HWRAEESTLVSVLSACIHLG 247
E T V +L AC H G
Sbjct: 186 GLLPCEITFVGILYACSHCG 205
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/583 (37%), Positives = 336/583 (57%), Gaps = 11/583 (1%)
Query: 32 QGWYPLLKRC----KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSI 87
Q Y LL C S+ + +VH H+L G D F + L+ + GS++YA +
Sbjct: 77 QQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYARKV 134
Query: 88 FRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACS----L 143
F + + + +N + R + G+ D F Y ++LKAC
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI 203
+ + +G +IH H+ + G +++ L+ MY + G + +A VF M ++V SWSA+
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEES-TLVSVLSACIHLGSPNLGRCIHGILLRN 262
I +A + L +M RE + S T+VSVL AC L + G+ IHG +LR
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 263 ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVF 322
+ + V ++L+ MY + G +E G VF M ++ S+ +IS +HG+G +A+Q+F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 323 SEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGR 382
E+L G +P V +V VL ACSH GLV EG + F+ M +H IKP ++HY CMVDLLGR
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 383 AGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVL 442
A L EA +++ M +P VW SLL +C++H N+E+ E A+ +LF L P N G+Y++L
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLL 494
Query: 443 ANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMI 502
A++YA A W++V R+++ + + L + PG +E RK+Y FVS D P + I+ +
Sbjct: 495 ADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFL 554
Query: 503 HQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNL 562
++ ++ +GY P T VL +++ +EK + HS+KLA+AF LI+TS+G P+RI++NL
Sbjct: 555 VKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNL 614
Query: 563 RLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
RLC DCH +TKFISK E+EI VRD RFH FK+G CSC DYW
Sbjct: 615 RLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 137/297 (46%), Gaps = 17/297 (5%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
P Y L+ C + + +++H H+ G D F+ LI MY G++ +A V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI---- 244
F+K ++++ W+A+ A A + L L M+R G ++ T VL AC+
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIG-VESDRFTYTYVLKACVASEC 193
Query: 245 ---HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS 301
HL G+ IH L R +V + T+L+DMY + GC++ VF M ++ S
Sbjct: 194 TVNHLMK---GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEE--GLAPDDVVYVGVLSACSHAGLVNEGLQCFKN 359
++ MI+ + +G EAL+ F E++ E +P+ V V VL AC+ + +G +
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG-KLIHG 309
Query: 360 MQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV-WRSLLSACKVH 415
+ + +V + GR G L + M DVV W SL+S+ VH
Sbjct: 310 YILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM--HDRDVVSWNSLISSYGVH 364
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/619 (38%), Positives = 347/619 (56%), Gaps = 29/619 (4%)
Query: 10 THLLSLPSTPPQCS-ELSTRFNE-QGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDS---F 64
H LS P PP S ST N Q + L + C M + KQ+HA L+ + + F
Sbjct: 26 VHPLS-PHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLF 84
Query: 65 CGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRG---NVSIMNXXXXXXXXXX 121
++ + + + YA +F IE SF +NT+IR +VS
Sbjct: 85 LYGKILQLSS--SFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKML 142
Query: 122 XXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGA 181
PD +PF+LKAC+ + G EG Q+H + K G G D++V NGLI +YG CG
Sbjct: 143 ERGES-SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 201
Query: 182 IKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+ A VF++M E+S+ SW+++I A + L L +M R + + T+ SVLS
Sbjct: 202 LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS--FEPDGYTMQSVLS 259
Query: 242 ACIHLGSPNLGRCIHGILLRNIS---ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKS 298
AC LGS +LG H LLR ++V+VK SLI+MY K G + VFQ M ++
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 299 RFSYTVMISGLSIHGHGAEALQVFSEILE--EGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
S+ MI G + HG EA+ F +++ E + P+ V +VG+L AC+H G VN+G Q
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY 379
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSAC-KVH 415
F M ++ I+P ++HYGC+VDL+ RAG + EA ++ SMP+KP+ V+WRSLL AC K
Sbjct: 380 FDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Query: 416 LNLEIGEIAAEKLFML-------NPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLV 468
++E+ E A + N N G Y++L+ +YA A +WNDV +R+ M++ +
Sbjct: 440 ASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIR 499
Query: 469 QTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQV-LLDVDE 527
+ PG S +E ++F + D S P+ IY + ++ +L GY PD SQ L+D
Sbjct: 500 KEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATN 559
Query: 528 DEKRE-RLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVR 586
D +E L+ HS++LAIAF LI+ +P+RI +NLR+C+DCH TK ISK+ EI VR
Sbjct: 560 DGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVR 619
Query: 587 DRFRFHHFKDGACSCKDYW 605
DR RFHHFKDG+CSC DYW
Sbjct: 620 DRVRFHHFKDGSCSCLDYW 638
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/630 (37%), Positives = 342/630 (54%), Gaps = 67/630 (10%)
Query: 40 RCKSMEEFKQVHAHVLKLGFFCDSFCGS---NLVATCA----------------LAKW-- 78
RC ME K+VH+ ++KLG + + N+ A C ++ W
Sbjct: 160 RC--METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNA 217
Query: 79 --------GSMEYACSIFRQIEEPGSFEYNTMIRG-NVSIMNXXXXXXXXXXXXXXGIGP 129
G M+ A + F Q+ E +N+MI G N + + P
Sbjct: 218 MIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP 277
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIK------ 183
D F +L AC+ L + G QIH H+ G V N LISMY +CG ++
Sbjct: 278 DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
Query: 184 ---------------------------HACDVFEKMDEKSVASWSAIIGAHACAEMWHQC 216
A ++F + ++ V +W+A+I + + +
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEA 397
Query: 217 LMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLID 276
+ L M G R TL ++LS L S + G+ IHG +++ +V V +LI
Sbjct: 398 INLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALIT 456
Query: 277 MYVKSGCIEKGVCVFQNMA-EKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDV 335
MY K+G I F + E+ S+T MI L+ HGH EAL++F +L EGL PD +
Sbjct: 457 MYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 336 VYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKS 395
YVGV SAC+HAGLVN+G Q F M+ KI PT+ HY CMVDL GRAG+L+EA I+
Sbjct: 517 TYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEK 576
Query: 396 MPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDV 455
MPI+P+ V W SLLSAC+VH N+++G++AAE+L +L P N G Y LAN+Y+ KW +
Sbjct: 577 MPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEA 636
Query: 456 ARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYK 515
A+IR+ M D + + GFS +E + KV+ F +D + PE + IY + ++ +++ GY
Sbjct: 637 AKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYV 696
Query: 516 PDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFI 575
PDT+ VL D++E+ K + L+HHS+KLAIAF LI T + + +RI +NLR+C+DCHT KFI
Sbjct: 697 PDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFI 756
Query: 576 SKICEREITVRDRFRFHHFKDGACSCKDYW 605
SK+ REI VRD RFHHFKDG CSC+DYW
Sbjct: 757 SKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 166/406 (40%), Gaps = 65/406 (16%)
Query: 74 ALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFI 133
A +K G M+ C F Q+ + S + TMI G +I GI P F
Sbjct: 89 AYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFT 148
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
+L + + ++ G ++H + K G+ ++ V N L++MY KCG A VF++M
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 194 EKSVASWSAIIGAH--------ACAEM----------WH-------------QCLMLLGD 222
+ ++SW+A+I H A A+ W+ + L +
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 223 MSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH-----------GILL----------- 260
M R+ + TL SVLSAC +L +G+ IH GI+L
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 261 -----------RNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGL 309
R +L + T+L+D Y+K G + + +F ++ ++ ++T MI G
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 310 SIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPT 369
HG EA+ +F ++ G P+ +LS S ++ G Q + +I +
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY-S 447
Query: 370 VQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
V ++ + +AG + A + + + V W S++ A H
Sbjct: 448 VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 167 FVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSRE 226
F N ++S Y K G + C+ F+++ ++ SW+ +I + +H+ + ++GDM +E
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 227 GHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVK------ 280
G + TL +VL++ G+ +H +++ NV V SL++MY K
Sbjct: 141 G-IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 281 -------------------------SGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHG 315
G ++ + F+ MAE+ ++ MISG + G+
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 316 AEALQVFSEILEEG-LAPDDVVYVGVLSACSH 346
AL +FS++L + L+PD VLSAC++
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/544 (38%), Positives = 321/544 (59%), Gaps = 3/544 (0%)
Query: 62 DSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXX 121
D FC + L +K G ++ A ++FR++ + Y +MI G
Sbjct: 331 DRFCNTLLDM---YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 122 XXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGA 181
GI PD + +L C+ + EG ++H + + +G DIFV N L+ MY KCG+
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 182 IKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
++ A VF +M K + SW+ IIG ++ ++ L L + E + +E T+ VL
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS 301
AC L + + GR IHG ++RN + V SL+DMY K G + +F ++A K S
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
+TVMI+G +HG G EA+ +F+++ + G+ D++ +V +L ACSH+GLV+EG + F M+
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIG 421
E KI+PTV+HY C+VD+L R G L +AY I++MPI P+ +W +LL C++H ++++
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 422 EIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERK 481
E AEK+F L P N G Y+++AN+YA A KW V R+R+ + + L + PG S +E + +
Sbjct: 688 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747
Query: 482 VYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKL 541
V FV+ D S PE + I + ++ ++ EGY P T L+D +E EK E L HS+KL
Sbjct: 748 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 807
Query: 542 AIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSC 601
A+A +I + G +R+++NLR+C DCH KF+SK+ REI +RD RFH FKDG CSC
Sbjct: 808 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867
Query: 602 KDYW 605
+ +W
Sbjct: 868 RGFW 871
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 183/368 (49%), Gaps = 5/368 (1%)
Query: 42 KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNT 101
KS+++ K+V + GF DS GS L + G ++ A +F +++ + +N
Sbjct: 108 KSLKDGKEVDNFIRGNGFVIDSNLGSKL--SLMYTNCGDLKEASRVFDEVKIEKALFWNI 165
Query: 102 MIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAG 161
++ + G+ D++ + + K+ S L V G Q+HG + K+G
Sbjct: 166 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSG 225
Query: 162 VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLG 221
G+ V N L++ Y K + A VF++M E+ V SW++II + + + L +
Sbjct: 226 FGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFV 285
Query: 222 DMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKS 281
M G + +T+VSV + C +LGR +H I ++ +L+DMY K
Sbjct: 286 QMLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 344
Query: 282 GCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVL 341
G ++ VF+ M+++S SYT MI+G + G EA+++F E+ EEG++PD VL
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 342 SACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPN 401
+ C+ L++EG + + ++ E+ + + ++D+ + G ++EA + M +K +
Sbjct: 405 NCCARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-D 462
Query: 402 DVVWRSLL 409
+ W +++
Sbjct: 463 IISWNTII 470
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 148/370 (40%), Gaps = 41/370 (11%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
+L+ C+ +K+G ++ + G D + + L MY CG +K A VF+++ +
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
W+ ++ A + + + L M G + T V + L S + G +H
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
G +L++ V SL+ Y+K+ ++ VF M E+ S+ +I+G +G
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278
Query: 317 EALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGL--------QCFKNMQ------- 361
+ L VF ++L G+ D V V + C+ + L++ G CF
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 362 ---------------FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDV 403
F +V Y M+ R G+ EA L + M I P+
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 404 VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPG-DYLV---LANMYARAHKWNDVARIR 459
++L+ C + L+ G+ E + N+ G D V L +MYA+ + +
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHE---WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 460 REMADKHLVQ 469
EM K ++
Sbjct: 456 SEMRVKDIIS 465
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/578 (36%), Positives = 337/578 (58%), Gaps = 4/578 (0%)
Query: 30 NEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKW-GSMEYACSIF 88
N Q L+ +C S+ E Q+ A+ +K SF + L+ C + SM YA +F
Sbjct: 28 NTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLF 86
Query: 89 RQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVK 148
+ EP +N+M RG N GI PDN+ +P LLKAC++ ++
Sbjct: 87 EAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALE 146
Query: 149 EGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
EG Q+H K G+ D+++V LI+MY +C + A VF+++ E V ++A+I +A
Sbjct: 147 EGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYA 206
Query: 209 CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNV 268
++ L L +M + + + E TL+SVLS+C LGS +LG+ IH ++ V
Sbjct: 207 RRNRPNEALSLFREMQGK-YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYV 265
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
V T+LIDM+ K G ++ V +F+ M K +++ MI + HG +++ +F + E
Sbjct: 266 KVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE 325
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
+ PD++ ++G+L+ACSH G V EG + F M + I P+++HYG MVDLL RAG L +
Sbjct: 326 NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Query: 389 AYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYAR 448
AY I +PI P ++WR LL+AC H NL++ E +E++F L+ ++ GDY++L+N+YAR
Sbjct: 386 AYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYAR 445
Query: 449 AHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQ 508
KW V +R+ M D+ V+ PG S +E V++F S D + ++ + +M +
Sbjct: 446 NKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKE 505
Query: 509 LEFEGYKPDTSQVL-LDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSD 567
L+ GY PDTS V+ ++++ EK L++HS+KLAI F L++T G+ +R+ +NLR+C D
Sbjct: 506 LKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRD 565
Query: 568 CHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
CH K IS I R++ +RD RFHHF+DG CSC D+W
Sbjct: 566 CHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/573 (38%), Positives = 326/573 (56%), Gaps = 6/573 (1%)
Query: 37 LLKRCKSMEEFKQ---VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
LL C +F + +H++ +K G + F + L+ A++G + +F ++
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL--YAEFGRLRDCQKVFDRMYV 310
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+N++I+ I PD L S LG ++ +
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370
Query: 154 HGHVFKAG-VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEM 212
G + G +DI + N ++ MY K G + A VF + V SW+ II +A
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGF 430
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKT 272
+ + + M EG A + T VSVL AC G+ G +HG LL+N L+V V T
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490
Query: 273 SLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAP 332
SL DMY K G +E + +F + + + +I+ HGHG +A+ +F E+L+EG+ P
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550
Query: 333 DDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL 392
D + +V +LSACSH+GLV+EG CF+ MQ ++ I P+++HYGCMVD+ GRAG L A
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610
Query: 393 IKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKW 452
IKSM ++P+ +W +LLSAC+VH N+++G+IA+E LF + P + G +++L+NMYA A KW
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670
Query: 453 NDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFE 512
V IR K L +TPG+S +E + KV F + +++ P ++ +Y + ++ +L+
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
Query: 513 GYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYT 572
GY PD VL DV++DEK L HS++LAIAF LI T + +RI +NLR+C DCH+ T
Sbjct: 731 GYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVT 790
Query: 573 KFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
KFISKI EREI VRD RFHHFK+G CSC DYW
Sbjct: 791 KFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 167/387 (43%), Gaps = 30/387 (7%)
Query: 35 YPLLKRCKSMEEFKQVHAHVL---KLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQI 91
+ L + C +++ K +HA ++ ++ C S NL C L G++ A F I
Sbjct: 58 HTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLY--CYL---GNVALARHTFDHI 112
Query: 92 EEPGSFEYNTMIRGNVSIMNXXXXXX-XXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEG 150
+ + +N MI G N G+ PD +P +LKAC V +G
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDG 169
Query: 151 IQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACA 210
+IH K G D++V LI +Y + A+ +A +F++M + + SW+A+I + +
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 211 EMWHQCLMLLGDMSREGHWRAEES-TLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
+ L L + RA +S T+VS+LSAC G N G IH +++ E +
Sbjct: 230 GNAKEALTLSNGL------RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
V LID+Y + G + VF M + S+ +I ++ A+ +F E+
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 330 LAPDDVVYVGVLSACSHAGLVN-----EGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAG 384
+ PD + + + S S G + +G K E + +V + + G
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-----DITIGNAVVVMYAKLG 398
Query: 385 MLREAYGLIKSMPIKPNDVVWRSLLSA 411
++ A + +P + + W +++S
Sbjct: 399 LVDSARAVFNWLP-NTDVISWNTIISG 424
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 14/280 (5%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
L + C+ L K +H + + ++ + L+++Y G + A F+ + +
Sbjct: 60 LFRYCTNLQSAK---CLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
V +W+ +I + A + + + T SVL AC + G IH
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIH 173
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
+ L+ +V V SLI +Y + + +F M + S+ MISG G+
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 317 EALQVFSEILEEGL-APDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGC 375
EAL L GL A D V V +LSAC+ AG N G+ + +H ++ +
Sbjct: 234 EALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNK 287
Query: 376 MVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
++DL G LR+ + M ++ + + W S++ A +++
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELN 326
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/563 (38%), Positives = 326/563 (57%), Gaps = 4/563 (0%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+ K++H + LK F + + VA+ AK GS+ YA +F I +N +I
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVAS--YAKCGSLSYAQRVFHGIRSKTVNSWNALI 468
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
G+ + G+ PD+F LL ACS L ++ G ++HG + + +
Sbjct: 469 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 528
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
D+FV ++S+Y CG + +F+ M++KS+ SW+ +I + + L + M
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC 283
G S ++ V AC L S LGR H L+++ E + + SLIDMY K+G
Sbjct: 589 VLYGIQLCGIS-MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
I + VF + EKS S+ MI G IHG EA+++F E+ G PDD+ ++GVL+A
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV 403
C+H+GL++EGL+ M+ +KP ++HY C++D+LGRAG L +A ++ + DV
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 404 -VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREM 462
+W+SLLS+C++H NLE+GE A KLF L P P +Y++L+N+YA KW DV ++R+ M
Sbjct: 768 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827
Query: 463 ADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVL 522
+ L + G S +E RKV+ FV +R F+ I ++ +E ++ GY+PDT V
Sbjct: 828 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 887
Query: 523 LDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICERE 582
D+ E+EK E+L+ HS+KLA+ + LI TSEG+ +R+ +NLR+C DCH K ISK+ ERE
Sbjct: 888 HDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMERE 947
Query: 583 ITVRDRFRFHHFKDGACSCKDYW 605
I VRD RFHHFK+G CSC DYW
Sbjct: 948 IVVRDNKRFHHFKNGVCSCGDYW 970
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 118/223 (52%), Gaps = 5/223 (2%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
PD+F YP ++KAC+ + V G+ +HG V K G+ +D+FV N L+S YG G + A +
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQL 244
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSRE---GHWRAEESTLVSVLSACIH 245
F+ M E+++ SW+++I + + +LLG+M E G + + +TLV+VL C
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
LG+ +HG ++ + +V+ +L+DMY K GCI +F+ K+ S+ M
Sbjct: 305 EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364
Query: 306 ISGLSIHGHGAEALQVFSEILE--EGLAPDDVVYVGVLSACSH 346
+ G S G V ++L E + D+V + + C H
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 11/320 (3%)
Query: 35 YP-LLKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQ 90
YP ++K C M + VH V+K G D F G+ LV+ G + A +F
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF--YGTHGFVTDALQLFDI 247
Query: 91 IEEPGSFEYNTMIR----GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGG 146
+ E +N+MIR S + PD +L C+
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 147 VKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGA 206
+ G +HG K + ++ + N L+ MY KCG I +A +F+ + K+V SW+ ++G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 207 HACAEMWHQCLMLLGDMSREGH-WRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISE 265
+ H +L M G +A+E T+++ + C H + +H L+
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 266 LNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEI 325
N +V + + Y K G + VF + K+ S+ +I G + +L ++
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 326 LEEGLAPDDVVYVGVLSACS 345
GL PD +LSACS
Sbjct: 488 KISGLLPDSFTVCSLLSACS 507
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 9/282 (3%)
Query: 136 FLLKACSLLGGVKEGIQIHGHVFKAGV--GDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
LL+A ++ G +IH V + DD+ +I+MY CG+ + VF+ +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTR-IITMYAMCGSPDDSRFVFDALR 147
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
K++ W+A+I +++ E++ + L +M + T V+ AC + +G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 254 CIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHG 313
+HG++++ +V V +L+ Y G + + +F M E++ S+ MI S +G
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 314 HGAEALQVFSEILEE----GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPT 369
E+ + E++EE PD V VL C+ + G + + ++
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKE 326
Query: 370 VQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+ ++D+ + G + A + K M N V W +++
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGG 367
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/612 (35%), Positives = 343/612 (56%), Gaps = 34/612 (5%)
Query: 27 TRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACS 86
+R + LL + +E +Q+HA + G D + V AL+ ++YA
Sbjct: 2 SRIGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQ 61
Query: 87 IFRQIEEPGSFEYNTMIRGNVS--IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLL 144
I + E+P F N+MIR + + + PDN+ FL++AC+ L
Sbjct: 62 ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121
Query: 145 GGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYG--------------------------- 177
+ G+Q+HG + G +D VQ GLIS+Y
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 178 ----KCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEE 233
+CG + A +FE M E+ +W+A+I +A + L + M EG +
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG-VKVNG 240
Query: 234 STLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQN 293
++SVLSAC LG+ + GR H + RN ++ V + T+L+D+Y K G +EK + VF
Sbjct: 241 VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWG 300
Query: 294 MAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEG 353
M EK+ ++++ ++GL+++G G + L++FS + ++G+ P+ V +V VL CS G V+EG
Sbjct: 301 MEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG 360
Query: 354 LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACK 413
+ F +M+ E I+P ++HYGC+VDL RAG L +A +I+ MP+KP+ VW SLL A +
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASR 420
Query: 414 VHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGF 473
++ NLE+G +A++K+ L N G Y++L+N+YA ++ W++V+ +R+ M K + + PG
Sbjct: 421 MYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGC 480
Query: 474 SMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRER 533
S++E +V++F D+S P++ I + + +L GYK DT+ V+ D+DE+EK +
Sbjct: 481 SVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDA 540
Query: 534 LKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHH 593
L HS+K AIAF ++ E P+RI +NLR+C DCH + ISKI REI VRDR RFHH
Sbjct: 541 LCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHH 600
Query: 594 FKDGACSCKDYW 605
FKDG CSC +W
Sbjct: 601 FKDGHCSCNGFW 612
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/582 (37%), Positives = 335/582 (57%), Gaps = 19/582 (3%)
Query: 38 LKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLV---ATCALAKWGSMEYACSIFRQI 91
+K C S+ + KQ H G+ D F S L+ +TC G +E A +F +I
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC-----GKLEDARKVFDEI 137
Query: 92 EEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIY------PFLLKACSLLG 145
+ + +MIRG N D+ ++ ++ ACS +
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVP 197
Query: 146 GVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCG--AIKHACDVFEKMDEKSVASWSAI 203
IH V K G + V N L+ Y K G + A +F+++ +K S+++I
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNI 263
+ +A + M ++ + + + TL +VL A H G+ +G+CIH ++R
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
E +V+V TS+IDMY K G +E F M K+ S+T MI+G +HGH A+AL++F
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRA 383
+++ G+ P+ + +V VL+ACSHAGL EG + F M+ ++P ++HYGCMVDLLGRA
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 384 GMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLA 443
G L++AY LI+ M +KP+ ++W SLL+AC++H N+E+ EI+ +LF L+ +N G Y++L+
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 444 NMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIH 503
++YA A +W DV R+R M ++ LV+ PGFS++E +V+ F+ D P+ + IY +
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 504 QMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLR 563
++ +L GY +TS V DVDE+EK L+ HS+KLAIAF +++T GS + + +NLR
Sbjct: 558 ELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLR 617
Query: 564 LCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+CSDCH K ISKI +RE VRD RFHHFKDG CSC DYW
Sbjct: 618 VCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 20/340 (5%)
Query: 89 RQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVK 148
R +++ F +N++I + + P +P +KACS L +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 149 EGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
G Q H F G DIFV + LI MY CG ++ A VF+++ ++++ SW+++I +
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 209 CAEMWHQCLMLLGDM-----SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNI 263
+ L D+ + + LVSV+SAC + + L IH +++
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCV----FQNMAEKSRFSYTVMISGLSIHGHGAEAL 319
+ V V +L+D Y K G E GV V F + +K R SY ++S + G EA
Sbjct: 214 FDRGVSVGNTLLDAYAKGG--EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 320 QVFSEILEEGLAPDDVVYVG-VLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVD 378
+VF +++ + + + + VL A SH+G + G +C + ++ V ++D
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDVIVGTSIID 330
Query: 379 LL---GRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
+ GR R+A+ +K+ ++ W ++++ +H
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRS----WTAMIAGYGMH 366
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/580 (37%), Positives = 335/580 (57%), Gaps = 18/580 (3%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
++++C S + KQ+ +H L G F SF S L+ CA++ +G + +A IFR I +P +
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLT 68
Query: 97 FEYNTMIRG-----NVSIMNXXXXXXXXXXXXXXGI-GPDNFIYPFLLKACSLLGGVKEG 150
++N +IRG + S+ I D F LKAC+
Sbjct: 69 NDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 151 IQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACA 210
Q+H + + G+ D + L+ Y K G + A +F++M + VASW+A+I
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSG 188
Query: 211 EMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCI-HGILLRNISELNVV 269
+ + L M EG R E T+V+ L AC HLG G I HG S NV+
Sbjct: 189 NRASEAMELYKRMETEG-IRRSEVTVVAALGACSHLGDVKEGENIFHGY-----SNDNVI 242
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNM-AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
V + IDMY K G ++K VF+ +KS ++ MI+G ++HG AL++F ++ +
Sbjct: 243 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 302
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
G+ PDDV Y+ L+AC HAGLV GL F NM + ++ ++HYGC+VDLL RAG LRE
Sbjct: 303 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 361
Query: 389 AYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYAR 448
A+ +I SM + P+ V+W+SLL A +++ ++E+ EIA+ ++ + NN GD+++L+N+YA
Sbjct: 362 AHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 421
Query: 449 AHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQ 508
+W DV R+R +M K + + PG S +EA+ +++F + D+S ++ IY I ++ ++
Sbjct: 422 QGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFK 481
Query: 509 LEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIH---TSEGSPMRISRNLRLC 565
+ +GY T VL D+ E+EK L +HS+KLA+A+ L+ E SP+R+ NLR+C
Sbjct: 482 IREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRIC 541
Query: 566 SDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
DCH K ISKI +REI VRDR RFH FKDG+CSC+D+W
Sbjct: 542 GDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/618 (35%), Positives = 333/618 (53%), Gaps = 39/618 (6%)
Query: 26 STRFNEQGWYP-LLKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCA-LAKWGS 80
S R + +P +LK C M + + VH +++LG CD + G+ L+ A L GS
Sbjct: 99 SGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGS 158
Query: 81 MEYACSIFRQIEEPGS------------------------FE---------YNTMIRGNV 107
++F ++ + S FE YNT+I G
Sbjct: 159 KISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYA 218
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
+ PD+F +L S V +G +IHG+V + G+ D++
Sbjct: 219 QSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVY 278
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
+ + L+ MY K I+ + VF ++ + SW++++ + +++ L L M
Sbjct: 279 IGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV-TA 337
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
+ SV+ AC HL + +LG+ +HG +LR N+ + ++L+DMY K G I+
Sbjct: 338 KVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAA 397
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
+F M S+T +I G ++HGHG EA+ +F E+ +G+ P+ V +V VL+ACSH
Sbjct: 398 RKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
GLV+E F +M + + ++HY + DLLGRAG L EAY I M ++P VW +
Sbjct: 458 GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWST 517
Query: 408 LLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHL 467
LLS+C VH NLE+ E AEK+F ++ N G Y+++ NMYA +W ++A++R M K L
Sbjct: 518 LLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
Query: 468 VQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDE 527
+ P S +E + K + FVS DRS P D I + + Q+E EGY DTS VL DVDE
Sbjct: 578 RKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDE 637
Query: 528 DEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRD 587
+ KRE L HS++LA+AF +I+T G+ +R+++N+R+C+DCH KFISKI EREI VRD
Sbjct: 638 EHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRD 697
Query: 588 RFRFHHFKDGACSCKDYW 605
RFHHF G CSC DYW
Sbjct: 698 NSRFHHFNRGNCSCGDYW 715
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 171/412 (41%), Gaps = 42/412 (10%)
Query: 40 RCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEY 99
R KS + KQ+HA ++ + S + + A +F+ ++ P +
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLSHT---SASIVISIYTNLKLLHEALLLFKTLKSPPVLAW 73
Query: 100 NTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFK 159
++IR G PD+ ++P +LK+C+++ ++ G +HG + +
Sbjct: 74 KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133
Query: 160 AGVGDDIFVQNGLISMYGKC------------------------------------GAIK 183
G+ D++ N L++MY K I
Sbjct: 134 LGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGID 193
Query: 184 HACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSAC 243
VFE M K V S++ II +A + M+ L ++ +M + + TL SVL
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT-DLKPDSFTLSSVLPIF 252
Query: 244 IHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYT 303
G+ IHG ++R + +V + +SL+DMY KS IE VF + + S+
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312
Query: 304 VMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE 363
+++G +G EAL++F +++ + P V + V+ AC+H ++ G Q
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ-LHGYVLR 371
Query: 364 HKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
+ +VD+ + G ++ A + M + ++V W +++ +H
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALH 422
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/570 (37%), Positives = 324/570 (56%), Gaps = 4/570 (0%)
Query: 36 PLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPG 95
P + + + K++H + ++ GF DS + AK GS+E A +F + E
Sbjct: 244 PAVSALRLISVGKEIHGYAMRSGF--DSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 96 SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
+N+MI V N G+ P + L AC+ LG ++ G IH
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
+ G+ ++ V N LISMY KC + A +F K+ +++ SW+A+I A
Sbjct: 362 LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPID 421
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
L M R + + T VSV++A L + + IHG+++R+ + NV V T+L+
Sbjct: 422 ALNYFSQM-RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 480
Query: 276 DMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDV 335
DMY K G I +F M+E+ ++ MI G HG G AL++F E+ + + P+ V
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGV 540
Query: 336 VYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKS 395
++ V+SACSH+GLV GL+CF M+ + I+ ++ HYG MVDLLGRAG L EA+ I
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 396 MPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDV 455
MP+KP V+ ++L AC++H N+ E AAE+LF LNP++ G +++LAN+Y A W V
Sbjct: 601 MPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKV 660
Query: 456 ARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYK 515
++R M + L +TPG SMVE + +V+ F S + P+ IY + ++ ++ GY
Sbjct: 661 GQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYV 720
Query: 516 PDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFI 575
PDT+ V L V+ D K + L HS+KLAI+F L++T+ G+ + + +NLR+C+DCH TK+I
Sbjct: 721 PDTNLV-LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYI 779
Query: 576 SKICEREITVRDRFRFHHFKDGACSCKDYW 605
S + REI VRD RFHHFK+GACSC DYW
Sbjct: 780 SLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 182/364 (50%), Gaps = 24/364 (6%)
Query: 17 STPPQCSELSTR----FNEQGWYP----------LLKRCKSMEEFKQVHAHVLKLGFFCD 62
ST PQ +R +E+ + P LL+RC S++E +Q+ V K G + +
Sbjct: 9 STVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQE 68
Query: 63 SFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXX 122
F + LV+ ++GS++ A +F I+ + Y+TM++G + +
Sbjct: 69 HFFQTKLVSL--FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM 126
Query: 123 XXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAI 182
+ P + + +LLK C ++ G +IHG + K+G D+F GL +MY KC +
Sbjct: 127 RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186
Query: 183 KHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSA 242
A VF++M E+ + SW+ I+ ++ M L ++ M E + + T+VSVL A
Sbjct: 187 NEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE-NLKPSFITIVSVLPA 245
Query: 243 CIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSY 302
L ++G+ IHG +R+ + V + T+L+DMY K G +E +F M E++ S+
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 303 TVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQF 362
MI + + EA+ +F ++L+EG+ P DV +G L AC+ G + G +F
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-------RF 358
Query: 363 EHKI 366
HK+
Sbjct: 359 IHKL 362
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/572 (35%), Positives = 332/572 (58%), Gaps = 4/572 (0%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE-EPG 95
+L+ C SM++ +++H+HV+ G ++L+ CA++ GS+ +A +F + +P
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 96 SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIG-PDNFIYPFLLKACSLLGGVKEGIQIH 154
+ ++N +IRG + + + PD F + F LK+C + + + ++IH
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
G V ++G DD V L+ Y G+++ A VF++M + + SW+ +I + + +
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHN 190
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
Q L + M EG + TLV++LS+C H+ + N+G +H I E V V +L
Sbjct: 191 QALSMYKRMGNEGVC-GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNAL 249
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
IDMY K G +E + VF M ++ ++ MI G +HGHG EA+ F +++ G+ P+
Sbjct: 250 IDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNA 309
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
+ ++G+L CSH GLV EG++ F+ M + + P V+HYGCMVDL GRAG L + +I
Sbjct: 310 ITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIY 369
Query: 395 SMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWND 454
+ + V+WR+LL +CK+H NLE+GE+A +KL L N GDY+++ ++Y+ A+
Sbjct: 370 ASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQA 429
Query: 455 VARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGY 514
A +R+ + L PG+S +E +V+KFV D+ PE IY+ + ++ + GY
Sbjct: 430 FASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGY 489
Query: 515 KP-DTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTK 573
KP D+++ + + HS+KLAIA+ L+ T+ G+ +RI++NLR+C DCH++TK
Sbjct: 490 KPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTK 549
Query: 574 FISKICEREITVRDRFRFHHFKDGACSCKDYW 605
++SK REI VRDR RFHHF DG CSC DYW
Sbjct: 550 YVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/584 (35%), Positives = 327/584 (55%), Gaps = 13/584 (2%)
Query: 28 RFNEQGWYPLLKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYA 84
R +E + ++K C +++E + Q+H V+K GF D + L+ A +K +M A
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV--AYSKCTAMLDA 349
Query: 85 CSIFRQIEEPGSF-EYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSL 143
+F++I G+ + MI G + G+ P+ F Y +L A +
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI 203
+ ++H V K V L+ Y K G ++ A VF +D+K + +WSA+
Sbjct: 410 ISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHL-GSPNLGRCIHGILLRN 262
+ +A + + G++++ G + E T S+L+ C S G+ HG +++
Sbjct: 466 LAGYAQTGETEAAIKMFGELTK-GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 263 ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVF 322
+ ++ V ++L+ MY K G IE VF+ EK S+ MISG + HG +AL VF
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 323 SEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGR 382
E+ + + D V ++GV +AC+HAGLV EG + F M + KI PT +H CMVDL R
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 383 AGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVL 442
AG L +A +I++MP +WR++L+AC+VH E+G +AAEK+ + P + Y++L
Sbjct: 645 AGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLL 704
Query: 443 ANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMI 502
+NMYA + W + A++R+ M ++++ + PG+S +E + K Y F++ DRS P D IY +
Sbjct: 705 SNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKL 764
Query: 503 HQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNL 562
+ +L+ GY+PDTS VL D+D++ K L HS++LAIAF LI T +GSP+ I +NL
Sbjct: 765 EDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNL 824
Query: 563 RLCSDCHTYTKFISKICEREITVRDRFRFHHF-KDGACSCKDYW 605
R+C DCH K I+KI EREI VRD RFHHF DG CSC D+W
Sbjct: 825 RVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 142/297 (47%), Gaps = 4/297 (1%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
+Q+H +K GF D G++LV T K + + +F +++E + T+I G
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDT--YMKGSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
G P++F + L + G G+Q+H V K G+ I
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
V N LI++Y KCG ++ A +F+K + KSV +W+++I +A + + L + M R
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM-RLN 289
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
+ R ES+ SV+ C +L +H +++ + ++T+L+ Y K +
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 288 VCVFQNMA-EKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+ +F+ + + S+T MISG + EA+ +FSE+ +G+ P++ Y +L+A
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 129/295 (43%), Gaps = 20/295 (6%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ D I+ +LK + L G Q+H K G DD+ V L+ Y K K
Sbjct: 88 GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG 147
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
VF++M E++V +W+ +I +A M + L L M EG + T + L
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGT-QPNSFTFAAALGVLAE 206
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
G G +H ++++N + + V SLI++Y+K G + K +F KS ++ M
Sbjct: 207 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
ISG + +G EAL +F + + + + V+ C++ K ++F +
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN----------LKELRFTEQ 316
Query: 366 IKPTVQHYGCMVDLLGRAGM---------LREAYGLIKSMPIKPNDVVWRSLLSA 411
+ +V YG + D R + + +A L K + N V W +++S
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/587 (36%), Positives = 316/587 (53%), Gaps = 31/587 (5%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCA-----------------------------LAKW 78
KQ+H V+KLGF GS L+ A L
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLL 138
G +E A +FR +E+ S + MI+G G+ D + + +L
Sbjct: 219 GMIEDALQLFRGMEKD-SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 139 KACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVA 198
AC LG + EG QIH + + D I+V + LI MY KC + +A VF++M +K+V
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 199 SWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGI 258
SW+A++ + + + + DM R G + TL +SAC ++ S G HG
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSG-IDPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 259 LLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEA 318
+ + V V SL+ +Y K G I+ +F M + S+T M+S + G E
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 319 LQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVD 378
+Q+F ++++ GL PD V GV+SACS AGLV +G + FK M E+ I P++ HY CM+D
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 379 LLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGD 438
L R+G L EA I MP P+ + W +LLSAC+ NLEIG+ AAE L L+P++P
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576
Query: 439 YLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTI 498
Y +L+++YA KW+ VA++RR M +K++ + PG S ++ + K++ F + D S P D I
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQI 636
Query: 499 YNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRI 558
Y + ++ ++ GYKPDTS V DV+E K + L +HS++LAIAF LI G P+R+
Sbjct: 637 YAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696
Query: 559 SRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+NLR+C DCH TK IS + REI VRD RFH FKDG CSC D+W
Sbjct: 697 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 120/261 (45%), Gaps = 10/261 (3%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
P+ F+Y ++ A +L+ ++ + + ++F N L+ Y K G I
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQP----NLFSWNNLLLAYSKAGLISEMEST 94
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
FEK+ ++ +W+ +I ++ + + + M R+ TL+++L G
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 249 PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISG 308
+LG+ IHG +++ E ++V + L+ MY GCI VF + +++ Y ++ G
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 309 LSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKP 368
L G +ALQ+F G+ D V + ++ + GL E ++CF+ M+ + +K
Sbjct: 215 LLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ-GLKM 268
Query: 369 TVQHYGCMVDLLGRAGMLREA 389
+G ++ G G + E
Sbjct: 269 DQYPFGSVLPACGGLGAINEG 289
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/584 (36%), Positives = 332/584 (56%), Gaps = 10/584 (1%)
Query: 27 TRFNEQGWYPLLKRCKSM-EEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYAC 85
T +Q LL+ S ++ K++HA VL+ GF + + L+ L G M YA
Sbjct: 6 TPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLEN--LVVIGDMCYAR 63
Query: 86 SIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG 145
+F ++ +P F +NT+ +G V G+ PD F YPF++KA S LG
Sbjct: 64 QVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG 123
Query: 146 GVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIG 205
G +H HV K G G V L+ MY K G + A +FE M K + +W+A +
Sbjct: 124 DFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA 183
Query: 206 AHACAEMWHQCLML--LGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNI 263
C + + + L M + + + T+VS+LSAC LGS +G I+ +
Sbjct: 184 V--CVQTGNSAIALEYFNKMCADA-VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEE 240
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
+ N++V+ + +DM++K G E +F+ M +++ S++ MI G +++G EAL +F+
Sbjct: 241 IDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFT 300
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM--QFEHKIKPTVQHYGCMVDLLG 381
+ EGL P+ V ++GVLSACSHAGLVNEG + F M + ++P +HY CMVDLLG
Sbjct: 301 TMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLG 360
Query: 382 RAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLV 441
R+G+L EAY IK MP++P+ +W +LL AC VH ++ +G+ A+ L P+ +++
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVL 420
Query: 442 LANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNM 501
L+N+YA A KW+ V ++R +M + +S VE E K++ F D+S P+ IY
Sbjct: 421 LSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEK 480
Query: 502 IHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRN 561
+ ++ ++ GY PDT V DV+ +EK L HHS+KLAIAF LI G P+R+ +N
Sbjct: 481 LDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKN 540
Query: 562 LRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
LR C DCH ++KF+S + EI +RD+ RFHHF++G CSCK++W
Sbjct: 541 LRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/573 (35%), Positives = 319/573 (55%), Gaps = 7/573 (1%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
+LK + +F +Q+HA + GF D+ G+ ++ +K + +F ++ E
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDF--YSKHDRVLETRMLFDEMPE 313
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
YN +I G NF + +L + L ++ G Q+
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
H A + V N L+ MY KC + A +F+ + +++ SW+A+I + +
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
L L M R + RA++ST +VL A S LG+ +H ++R+ + NV +
Sbjct: 434 GAGLKLFTKM-RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
L+DMY K G I+ V VF+ M +++ S+ +IS + +G G A+ F++++E GL PD
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 334 DVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
V +GVL+ACSH G V +G + F+ M + I P +HY CM+DLLGR G EA L+
Sbjct: 553 SVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM 612
Query: 394 KSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLF-MLNPNNPGDYLVLANMYARAHKW 452
MP +P++++W S+L+AC++H N + E AAEKLF M + Y+ ++N+YA A +W
Sbjct: 613 DEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEW 672
Query: 453 NDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFE 512
V +++ M ++ + + P +S VE K++ F S D++ P D I I+++ ++E E
Sbjct: 673 EKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE 732
Query: 513 GYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYT 572
GYKPDTS V+ DVDE K E LK+HS++LA+AF LI T EG P+ + +NLR C DCH
Sbjct: 733 GYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAI 792
Query: 573 KFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
K ISKI +REITVRD RFHHF +G CSC DYW
Sbjct: 793 KLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 165/364 (45%), Gaps = 5/364 (1%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
QVHA +KLGF + F + V + + ++ AC +F +I E S +NT+I G
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
G P +F + +LKA L G Q+H G D V
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGH 228
N ++ Y K + +F++M E S++ +I +++ A+ + L +M G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 229 WRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGV 288
R ++LS +L S +GR +H L ++ + V SL+DMY K E+
Sbjct: 348 DR-RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 289 CVFQNMAEKSRFSYTVMISGLSIHG-HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
+F+++ +++ S+T +ISG G HGA L++F+++ L D + VL A +
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGA-GLKLFTKMRGSNLRADQSTFATVLKASASF 465
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
+ G Q + ++ G +VD+ + G +++A + + MP + N V W +
Sbjct: 466 ASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNA 523
Query: 408 LLSA 411
L+SA
Sbjct: 524 LISA 527
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
N +IS + K G + A D+F+ M +++V +W+ ++G +A + + L M R
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 230 R-AEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELN--VVVKTSLIDMYVKSGCIEK 286
+ T ++L C N +H ++ + N + V L+ Y + ++
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 287 GVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+F+ + EK ++ +I+G G E++ +F ++ + G P D + GVL A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/466 (40%), Positives = 288/466 (61%), Gaps = 3/466 (0%)
Query: 142 SLLGGVKEG--IQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVAS 199
++L G +G +++ +F ++ N +I+ Y +CG I A ++F+KM ++ S
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376
Query: 200 WSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL 259
W+A+I ++ + + L L M REG R S+ S LS C + + LG+ +HG L
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 260 LRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEAL 319
++ E V +L+ MY K G IE+ +F+ MA K S+ MI+G S HG G AL
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 320 QVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDL 379
+ F + EGL PDD V VLSACSH GLV++G Q F M ++ + P QHY CMVDL
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 555
Query: 380 LGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDY 439
LGRAG+L +A+ L+K+MP +P+ +W +LL A +VH N E+ E AA+K+F + P N G Y
Sbjct: 556 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 615
Query: 440 LVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIY 499
++L+N+YA + +W DV ++R M DK + + PG+S +E + K + F D PE D I+
Sbjct: 616 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 675
Query: 500 NMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRIS 559
+ +++ +++ GY TS VL DV+E+EK +++HS++LA+A+ ++ S G P+R+
Sbjct: 676 AFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVI 735
Query: 560 RNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+NLR+C DCH K++++I R I +RD RFHHFKDG+CSC DYW
Sbjct: 736 KNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV 197
L C+ + ++ G Q+HG + K G FV N L+ MY KCG+I+ A D+F++M K +
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
SW+ +I ++ L M REG + +++T+V+VLSAC H G + GR
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREG-LKPDDATMVAVLSACSHTGLVDKGRQYFY 534
Query: 258 ILLRNISEL-NVVVKTSLIDMYVKSGCIEKGVCVFQNMA-EKSRFSYTVMISGLSIHGH 314
+ ++ + N ++D+ ++G +E + +NM E + ++ +HG+
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 162/404 (40%), Gaps = 36/404 (8%)
Query: 9 QTHLLSLPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSN 68
Q H SL +C+ N + LKR + K +LK G DS
Sbjct: 15 QLHYTSLNGLKRRCNNAHGAAN----FHSLKRATQTQIQKSQTKPLLKCG---DSDIKEW 67
Query: 69 LVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIG 128
VA + + G A +F+++ S YN MI G + +
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
N + ++ +L G +E +F+ D+ N ++S Y + G + A V
Sbjct: 128 SWNVMIKGYVRNRNL-GKARE-------LFEIMPERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
F++M EK+ SW+A++ A+ + ML SRE +W LVS C+ G
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLF--KSRE-NW-----ALVSW--NCLLGGF 229
Query: 249 PNLGRCIHG-ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMIS 307
+ + +++ +VV ++I Y +SG I++ +F + F++T M+S
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 308 GLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIK 367
G + EA ++F ++ E ++V + +L+ + + F M +
Sbjct: 290 GYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRN--- 342
Query: 368 PTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
V + M+ + G + EA L MP K + V W ++++
Sbjct: 343 --VSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 7/184 (3%)
Query: 28 RFNEQGWYPLLKRCK---SMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYA 84
R N + L C ++E KQ+H ++K G+ F G+ L+ K GS+E A
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL--LMYCKCGSIEEA 463
Query: 85 CSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLL 144
+F+++ +NTMI G G+ PD+ +L ACS
Sbjct: 464 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 145 GGVKEGIQ-IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD-EKSVASWSA 202
G V +G Q + GV + ++ + G+ G ++ A ++ + M E A W
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 203 IIGA 206
++GA
Sbjct: 584 LLGA 587
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 321/586 (54%), Gaps = 9/586 (1%)
Query: 23 SELSTRFNEQGWYPLLKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWG 79
+E TR + +L ++E + Q+H+ K G + + + ++ +K G
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL--YSKCG 270
Query: 80 SMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLK 139
++ ++FR+ +P YN MI G S G L+
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA---RLRSSTLVS 327
Query: 140 ACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVAS 199
+ G + IHG+ K+ V L ++Y K I+ A +F++ EKS+ S
Sbjct: 328 LVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 200 WSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL 259
W+A+I + + + L +M + + T+ +LSAC LG+ +LG+ +H ++
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQK-SEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 260 LRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEAL 319
E ++ V T+LI MY K G I + +F M +K+ ++ MISG +HG G EAL
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEAL 506
Query: 320 QVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDL 379
+F E+L G+ P V ++ VL ACSHAGLV EG + F +M + +P+V+HY CMVD+
Sbjct: 507 NIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDI 566
Query: 380 LGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDY 439
LGRAG L+ A I++M I+P VW +LL AC++H + + +EKLF L+P+N G +
Sbjct: 567 LGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYH 626
Query: 440 LVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIY 499
++L+N+++ + A +R+ + L + PG++++E + F S D+S P+ IY
Sbjct: 627 VLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIY 686
Query: 500 NMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRIS 559
+ ++E ++ GY+P+T L DV+E+E+ +K HS++LAIAF LI T G+ +RI
Sbjct: 687 EKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRII 746
Query: 560 RNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+NLR+C DCHT TK ISKI ER I VRD RFHHFKDG CSC DYW
Sbjct: 747 KNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 172/424 (40%), Gaps = 33/424 (7%)
Query: 30 NEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFR 89
++ + KR S+ Q HA ++ GF D + L T L+ G++ YA IF
Sbjct: 19 SKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKL--TQRLSDLGAIYYARDIFL 76
Query: 90 QIEEPGSFEYNTMIRG-NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVK 148
++ P F +N ++RG +V+ + P++ Y F + A S +
Sbjct: 77 SVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDR 136
Query: 149 EGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
G IHG G ++ + + ++ MY K ++ A VF++M EK W+ +I +
Sbjct: 137 AGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYR 196
Query: 209 CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNV 268
EM+ + + + D+ E R + +TL+ +L A L LG IH + + +
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
V T I +Y K G I+ G +F+ + +Y MI G + +G +L +F E++
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 329 GLAPDDVVYVGVLSAC-------------------SHAGLVNEGLQCFKNMQ-------- 361
G V ++ SHA + + +
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKL 376
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSACKVHLNL 418
F+ + ++ + M+ + G+ +A L + M PN V +LSAC L
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 419 EIGE 422
+G+
Sbjct: 437 SLGK 440
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 338/580 (58%), Gaps = 8/580 (1%)
Query: 30 NEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFR 89
N + +++ +++ +QVHAH++ G+ + L+ A+ ++ Y +F
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSAR--AIAYTHLLFL 65
Query: 90 QIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE 149
+ P F +N++I+ + + P N+ + ++K+C+ L ++
Sbjct: 66 SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 125
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHAC 209
G +H H +G G D +VQ L++ Y KCG ++ A VF++M EKS+ +W++++
Sbjct: 126 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 185
Query: 210 AEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
+ + + + M RE + + +T VS+LSAC G+ +LG +H ++ +LNV
Sbjct: 186 NGLADEAIQVFYQM-RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVK 244
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE- 328
+ T+LI++Y + G + K VF M E + ++T MIS HG+G +A+++F+++ ++
Sbjct: 245 LGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDC 304
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
G P++V +V VLSAC+HAGLV EG +K M +++ P V+H+ CMVD+LGRAG L E
Sbjct: 305 GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDE 364
Query: 389 AYGLIKSMPIKPN---DVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANM 445
AY I + +W ++L ACK+H N ++G A++L L P+NPG +++L+N+
Sbjct: 365 AYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNI 424
Query: 446 YARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQM 505
YA + K ++V+ IR M +L + G+S++E E K Y F D S E IY + +
Sbjct: 425 YALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETL 484
Query: 506 EWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLC 565
+ + GY P + +V+ V+E+EK L++HS+KLA+AF L+ T + + + I +NLR+C
Sbjct: 485 ISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVDVA-ITIVKNLRIC 543
Query: 566 SDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
DCH+ K+IS + R+ITVRD+ RFHHF++G+CSC DYW
Sbjct: 544 EDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/588 (36%), Positives = 335/588 (56%), Gaps = 24/588 (4%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFC-DSFCGSNLV---ATCALAKWGSMEYACSIFR 89
+L C +E K++HA+ LK G +SF GS LV C G + R
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 90 QIEEPGSFEYNTMIRG-NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVK 148
+I +N MI G + + + G+ ++ ++ AC G
Sbjct: 368 KIGL-----WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 149 EGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
IHG V K G+ D FVQN L+ MY + G I A +F KM+++ + +W+ +I +
Sbjct: 423 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 209 CAEMWHQCLMLLGDMSR------EGHWRA----EESTLVSVLSACIHLGSPNLGRCIHGI 258
+E L+LL M +G R TL+++L +C L + G+ IH
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542
Query: 259 LLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEA 318
++N +V V ++L+DMY K GC++ VF + +K+ ++ V+I +HG+G EA
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602
Query: 319 LQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVD 378
+ + ++ +G+ P++V ++ V +ACSH+G+V+EGL+ F M+ ++ ++P+ HY C+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662
Query: 379 LLGRAGMLREAYGLIKSMPIKPNDV-VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPG 437
LLGRAG ++EAY L+ MP N W SLL A ++H NLEIGEIAA+ L L PN
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722
Query: 438 DYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDT 497
Y++LAN+Y+ A W+ +RR M ++ + + PG S +E +V+KFV+ D S P+ +
Sbjct: 723 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEK 782
Query: 498 IYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMR 557
+ + + ++ EGY PDTS VL +V+EDEK L HS+KLAIAF +++TS G+ +R
Sbjct: 783 LSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIR 842
Query: 558 ISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+++NLR+C+DCH TKFISKI +REI +RD RFH FK+G CSC DYW
Sbjct: 843 VAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 122/232 (52%), Gaps = 6/232 (2%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG-DDIFVQNGLISMYGKCGAIKH 184
GI PDN+ +P LLKA + L ++ G QIH HV+K G G D + V N L+++Y KCG
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 185 ACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI 244
VF+++ E++ SW+++I + E W L M E + TLVSV++AC
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDE-NVEPSSFTLVSVVTACS 210
Query: 245 HLGSPN---LGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS 301
+L P +G+ +H LR ELN + +L+ MY K G + + + + +
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRK-GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEG 353
+ ++S L + EAL+ E++ EG+ PD+ VL ACSH ++ G
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 178/396 (44%), Gaps = 20/396 (5%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
KQVHA+ L+ G +SF + LVA K G + + + +NT++
Sbjct: 222 KQVHAYGLRKGEL-NSFIINTLVAM--YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAG-VGDDI 166
G+ PD F +L ACS L ++ G ++H + K G + ++
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 167 FVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSRE 226
FV + L+ MY C + VF+ M ++ + W+A+I ++ E + L+L M
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 227 GHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEK 286
A +T+ V+ AC+ G+ + IHG +++ + + V+ +L+DMY + G I+
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 287 GVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEI--LEE---------GLAPDDV 335
+ +F M ++ ++ MI+G H +AL + ++ LE L P+ +
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 336 VYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKS 395
+ +L +C+ + +G + ++ + V +VD+ + G L+ + +
Sbjct: 519 TLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 396 MPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFML 431
+P K N + W ++ A +H N G+ A + L M+
Sbjct: 578 IPQK-NVITWNVIIMAYGMHGN---GQEAIDLLRMM 609
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 142/312 (45%), Gaps = 8/312 (2%)
Query: 42 KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNT 101
+ ME KQ+HAHV K G+ DS +N + K G +F +I E +N+
Sbjct: 111 QDMELGKQIHAHVYKFGYGVDSVTVANTLVNL-YRKCGDFGAVYKVFDRISERNQVSWNS 169
Query: 102 MIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG---GVKEGIQIHGHVF 158
+I S + P +F ++ ACS L G+ G Q+H +
Sbjct: 170 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL 229
Query: 159 KAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLM 218
+ G + F+ N L++MYGK G + + + + + +W+ ++ + E + L
Sbjct: 230 RKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 288
Query: 219 LLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS-ELNVVVKTSLIDM 277
L +M EG +E T+ SVL AC HL G+ +H L+N S + N V ++L+DM
Sbjct: 289 YLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDM 347
Query: 278 YVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE-GLAPDDVV 336
Y + G VF M ++ + MI+G S + H EAL +F + E GL +
Sbjct: 348 YCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 407
Query: 337 YVGVLSACSHAG 348
GV+ AC +G
Sbjct: 408 MAGVVPACVRSG 419
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/573 (35%), Positives = 325/573 (56%), Gaps = 7/573 (1%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
+L+ C + + K ++ ++LK GF +S + L+ AK G M A +F +E
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDV--YAKCGDMITARDVFNSMEC 370
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+ +N++I G + + D+ Y L+ + L +K G +
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
H + K+G+ D+ V N LI MY KCG + + +F M +W+ +I A +
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
L + M R+ + +T + L C L + LG+ IH LLR E + + +
Sbjct: 491 ATGLQVTTQM-RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
LI+MY K GC+E VF+ M+ + ++T MI ++G G +AL+ F+++ + G+ PD
Sbjct: 550 LIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPD 609
Query: 334 DVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
VV++ ++ ACSH+GLV+EGL CF+ M+ +KI P ++HY C+VDLL R+ + +A I
Sbjct: 610 SVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI 669
Query: 394 KSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWN 453
++MPIKP+ +W S+L AC+ ++E E + ++ LNP++PG ++ +N YA KW+
Sbjct: 670 QAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWD 729
Query: 454 DVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEG 513
V+ IR+ + DKH+ + PG+S +E + V+ F S D S P+ + IY + + + EG
Sbjct: 730 KVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEG 789
Query: 514 YKPDTSQVLLDVDEDEKRERLK-HHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYT 572
Y PD +V +++E+E++ RL HS++LAIAF L++T G+P+++ +NLR+C DCH T
Sbjct: 790 YIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVT 849
Query: 573 KFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
K ISKI REI VRD RFH FKDG CSCKD W
Sbjct: 850 KLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 176/390 (45%), Gaps = 11/390 (2%)
Query: 25 LSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYA 84
+ TR + L ++ E +++HA V+ LG F L+ + + +
Sbjct: 1 MQTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDK--YSHFREPASS 58
Query: 85 CSIFRQIEEPGS-FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSL 143
S+FR++ + + +N++IR + PD + +P ++KAC+
Sbjct: 59 LSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAG 118
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI 203
L + G ++ + G D+FV N L+ MY + G + A VF++M + + SW+++
Sbjct: 119 LFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSL 178
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEES-TLVSVLSACIHLGSPNLGRCIHGILLRN 262
I ++ + + L + ++ + W +S T+ SVL A +L G+ +HG L++
Sbjct: 179 ISGYSSHGYYEEALEIYHEL--KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKS 236
Query: 263 ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVF 322
VVV L+ MY+K VF M + SY MI G E++++F
Sbjct: 237 GVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF 296
Query: 323 SEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM-QFEHKIKPTVQHYGCMVDLLG 381
E L++ PD + VL AC H ++ + M + ++ TV++ ++D+
Sbjct: 297 LENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYA 353
Query: 382 RAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+ G + A + SM K + V W S++S
Sbjct: 354 KCGDMITARDVFNSMECK-DTVSWNSIISG 382
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 161/372 (43%), Gaps = 15/372 (4%)
Query: 84 ACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSL 143
A +F +++ S YNTMI G + + PD +L+AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLK-LEMVEESVRMFLENLDQFKPDLLTVSSVLRACGH 319
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI 203
L + I+ ++ KAG + V+N LI +Y KCG + A DVF M+ K SW++I
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNI 263
I + + + + L M +A+ T + ++S L G+ +H +++
Sbjct: 380 ISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
+++ V +LIDMY K G + + +F +M ++ +IS G A LQV +
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ---CFKNMQFEHKIKPTVQHYGCMVDLL 380
++ + + PD ++ L C+ G + C +E ++ Q ++++
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL----QIGNALIEMY 554
Query: 381 GRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNN--PGD 438
+ G L + + + M + + V W ++ A ++ GE A E + + P
Sbjct: 555 SKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDS 610
Query: 439 YLVLANMYARAH 450
+ +A +YA +H
Sbjct: 611 VVFIAIIYACSH 622
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/565 (35%), Positives = 321/565 (56%), Gaps = 6/565 (1%)
Query: 47 FKQVHAHVLKLGFFCDSFCGSNLVATCALAKWG-SMEYACSIFRQIEEPGSFEYNTMIRG 105
+Q+HA +L+ +S + ++ AL+ + Y+C +F Q P NTMIR
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRA 86
Query: 106 -NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGD 164
++S + + F LK C G + G+QIHG +F G
Sbjct: 87 FSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLS 146
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
D + L+ +Y C AC VF+++ ++ SW+ + + + L+L M
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 225 RE--GHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSG 282
+ G + + T + L AC +LG+ + G+ +H + N + + +L+ MY + G
Sbjct: 207 NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCG 266
Query: 283 CIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLS 342
++K VF M E++ S+T +ISGL+++G G EA++ F+E+L+ G++P++ G+LS
Sbjct: 267 SMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLS 326
Query: 343 ACSHAGLVNEGLQCFKNMQF-EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPN 401
ACSH+GLV EG+ F M+ E KIKP + HYGC+VDLLGRA +L +AY LIKSM +KP+
Sbjct: 327 ACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPD 386
Query: 402 DVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRRE 461
+WR+LL AC+VH ++E+GE L L GDY++L N Y+ KW V +R
Sbjct: 387 STIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSL 446
Query: 462 MADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQV 521
M +K + PG S +E + V++F+ D S P + IY M+ ++ QL+ GY + +
Sbjct: 447 MKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSE 506
Query: 522 LLDVD-EDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICE 580
L +++ E+EK L++HS+KLAIAF ++ T G+ +R+++NLR C DCH + KF+S + +
Sbjct: 507 LHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYD 566
Query: 581 REITVRDRFRFHHFKDGACSCKDYW 605
R + VRDR RFHHFK G+CSC D+W
Sbjct: 567 RIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/597 (34%), Positives = 326/597 (54%), Gaps = 33/597 (5%)
Query: 40 RCKSMEEFKQVHAHVLKLGFF---------------CDSF---------------CGSNL 69
+ +++EE K+VH H+ GF C S C N+
Sbjct: 97 QTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNV 156
Query: 70 VATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSI-MNXXXXXXXXXXXXXXGIG 128
+ A+ G +E A +F ++ E S+ + M+ G V
Sbjct: 157 MVN-GYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSR 215
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
P+ F + A + + ++ G +IHGH+ +AG+ D + + L+ MYGKCG I A ++
Sbjct: 216 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNI 275
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
F+K+ EK V SW+++I + + W + L ++ R E T VL+AC L +
Sbjct: 276 FDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE-RPNEYTFAGVLNACADLTT 334
Query: 249 PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISG 308
LG+ +HG + R + +SL+DMY K G IE V + S+T +I G
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 309 LSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKP 368
+ +G EAL+ F +L+ G PD V +V VLSAC+HAGLV +GL+ F ++ +H++
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH 454
Query: 369 TVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKL 428
T HY C+VDLL R+G + +I MP+KP+ +W S+L C + N+++ E AA++L
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL 514
Query: 429 FMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQ 488
F + P NP Y+ +AN+YA A KW + ++R+ M + + + PG S E +RK + F++
Sbjct: 515 FKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAA 574
Query: 489 DRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLI 548
D S P ++ I + ++ +++ EGY P TS VL DV++++K E L +HS+KLA+AF ++
Sbjct: 575 DTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAIL 634
Query: 549 HTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
T EG+ +++ +NLR C DCH KFIS I +R+ITVRD RFH F++G CSC DYW
Sbjct: 635 STEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 33/315 (10%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
P Y L++ CS ++EG ++H H+ +G I + N L+ MY KCG++ A V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGH--WRA-----------EEST 235
F++M + + SW+ ++ +A + + L +M+ + W A EE+
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 236 LVSVLSACIHLGSPNL------------------GRCIHGILLRNISELNVVVKTSLIDM 277
++ L + PN+ G+ IHG ++R + + V+ +SL+DM
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 278 YVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
Y K GCI++ +F + EK S+T MI E +FSE++ P++ +
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 338 VGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP 397
GVL+AC+ G Q M P +VD+ + G + A ++ P
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 398 IKPNDVVWRSLLSAC 412
KP+ V W SL+ C
Sbjct: 382 -KPDLVSWTSLIGGC 395
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/571 (36%), Positives = 324/571 (56%), Gaps = 6/571 (1%)
Query: 38 LKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSF 97
+K C S+E + +H V+K + F G LV C L + G A +F ++ E
Sbjct: 41 VKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVG-CYL-RLGHDVCAEKLFDEMPERDLV 98
Query: 98 EYNTMIRG--NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
+N++I G + G P+ + ++ AC G +EG IHG
Sbjct: 99 SWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHG 158
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
V K GV +++ V N I+ YGK G + +C +FE + K++ SW+ +I H + +
Sbjct: 159 LVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEK 218
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
L R GH +++T ++VL +C +G L + IHG+++ N + T+L+
Sbjct: 219 GLAYFNMSRRVGH-EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALL 277
Query: 276 DMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDV 335
D+Y K G +E VF + ++T M++ + HG G +A++ F ++ G++PD V
Sbjct: 278 DLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHV 337
Query: 336 VYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKS 395
+ +L+ACSH+GLV EG F+ M ++I P + HY CMVDLLGR+G+L++AYGLIK
Sbjct: 338 TFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKE 397
Query: 396 MPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDV 455
MP++P+ VW +LL AC+V+ + ++G AAE+LF L P + +Y++L+N+Y+ + W D
Sbjct: 398 MPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDA 457
Query: 456 ARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFE-GY 514
+RIR M K LV+ G S +E K++KFV D S PE + I + ++ +++ E GY
Sbjct: 458 SRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGY 517
Query: 515 KPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKF 574
K T VL DV ED K E + HS+K+A+AF L+ S P+ I +NLR+C DCH K
Sbjct: 518 KSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKA 577
Query: 575 ISKICEREITVRDRFRFHHFKDGACSCKDYW 605
IS I +R I +RD RFHHF DG+CSC DYW
Sbjct: 578 ISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 300/511 (58%), Gaps = 31/511 (6%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKC------ 179
G+ PD + +CS L + G HG+V + G + N LI MY KC
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 180 -------------------------GAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
G + A + FE M EK++ SW+ II ++
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
+ + + M + A+ T++S+ SAC HLG+ +L + I+ + +N +L+V + T+L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
+DM+ + G E + +F ++ + ++T I +++ G+ A+++F +++E+GL PD
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
V +VG L+ACSH GLV +G + F +M H + P HYGCMVDLLGRAG+L EA LI+
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 395 SMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWND 454
MP++PNDV+W SLL+AC+V N+E+ AAEK+ +L P G Y++L+N+YA A +WND
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691
Query: 455 VARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGY 514
+A++R M +K L + PG S ++ K ++F S D S PE I M+ ++ + G+
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 751
Query: 515 KPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKF 574
PD S VL+DVDE EK L HS+KLA+A+ LI +++G+ +RI +NLR+CSDCH++ KF
Sbjct: 752 VPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKF 811
Query: 575 ISKICEREITVRDRFRFHHFKDGACSCKDYW 605
SK+ REI +RD RFH+ + G CSC D+W
Sbjct: 812 ASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 184/406 (45%), Gaps = 33/406 (8%)
Query: 38 LKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVA-TCALAKWGSMEYACSIFRQIEEPGS 96
LK CK+++E K H + K G D + LVA +C L S+ +A +F E G+
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 97 -FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
F YN++IRG S GI PD + +PF L AC+ GIQIHG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
+ K G D+FVQN L+ Y +CG + A VF++M E++V SW+++I +A +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
+ L M R+ T+V V+SAC L G ++ + + E+N ++ ++L+
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 276 DMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDV 335
DMY+K I+ +F + M S G EAL VF+ +++ G+ PD +
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 336 VYVGVLSACS-----------HAGLVNEGLQCFKNM-------------------QFEHK 365
+ +S+CS H ++ G + + N+ F+
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
TV + +V G + A+ ++MP K N V W +++S
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK-NIVSWNTIISG 443
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 167/381 (43%), Gaps = 37/381 (9%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
Q+H ++K+G+ D F ++LV A+ G ++ A +F ++ E + +MI G
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHF--YAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 109 -IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
+ P++ ++ AC+ L ++ G +++ + +G+ +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
+ + L+ MY KC AI A +F++ ++ +A+ + + + L + M G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN------------------------- 262
R + +++S +S+C L + G+ HG +LRN
Sbjct: 333 -VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 263 ------ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
+S VV S++ YV++G ++ F+ M EK+ S+ +ISGL
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 317 EALQVFSEIL-EEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGC 375
EA++VF + +EG+ D V + + SAC H G ++ + ++ ++ I+ V+
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE-KNGIQLDVRLGTT 510
Query: 376 MVDLLGRAGMLREAYGLIKSM 396
+VD+ R G A + S+
Sbjct: 511 LVDMFSRCGDPESAMSIFNSL 531
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 133/301 (44%), Gaps = 21/301 (6%)
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVS-IMNXXXXXXXXXXXXXXGIGPDNFIYPFL 137
G ++ A F + E +NT+I G V + G+ D +
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV 197
AC LG + I+ ++ K G+ D+ + L+ M+ +CG + A +F + + V
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
++W+A IGA A A + + L DM +G + + V L+AC H G G+ I
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFY 595
Query: 258 ILLR--NISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA-EKSRFSYTVMISGLSIHG- 313
+L+ +S +V ++D+ ++G +E+ V + ++M E + + +++ + G
Sbjct: 596 SMLKLHGVSPEDVHYGC-MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
Query: 314 -----HGAEALQVFSEILEEGLAPDDV-VYVGVLSACSHAGLVNEGLQCFKNMQFEHKIK 367
+ AE +QV LAP+ YV + + + AG N+ + +M+ + K
Sbjct: 655 VEMAAYAAEKIQV--------LAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRK 706
Query: 368 P 368
P
Sbjct: 707 P 707
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/575 (36%), Positives = 323/575 (56%), Gaps = 13/575 (2%)
Query: 41 CKSMEEF---KQVHAHVLKLGFFCDSFCG-SNLVATCALAKWGSMEYACSIFRQIEEPGS 96
C +E KQ+H+ ++ G D C ++ A C+ GS++ +F ++E+
Sbjct: 279 CAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSAD--GSVDDCRKVFDRMEDHSV 336
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXG--IGPDNFIYPFLLKACSLLGGVKEGIQIH 154
+ +I G + N + P++F + KAC L + G Q+
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
G FK G+ + V N +ISM+ K ++ A FE + EK++ S++ + +
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE 456
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
Q LL +++ E T S+LS ++GS G IH +++ N V +L
Sbjct: 457 QAFKLLSEIT-ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
I MY K G I+ VF M ++ S+T MI+G + HG L+ F++++EEG+ P++
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
V YV +LSACSH GLV+EG + F +M +HKIKP ++HY CMVDLL RAG+L +A+ I
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 395 SMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWND 454
+MP + + +VWR+ L AC+VH N E+G++AA K+ L+PN P Y+ L+N+YA A KW +
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 455 VARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGY 514
+RR+M +++LV+ G S +E K++KF D + P IY+ + ++ +++ GY
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Query: 515 KPDTSQVLLDVDEDEKRER----LKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHT 570
PDT VL ++E+ L HS+K+A+AF LI TS+ P+R+ +NLR+C DCH
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHN 815
Query: 571 YTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
K+IS + REI +RD RFHHFKDG CSC DYW
Sbjct: 816 AMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 162/396 (40%), Gaps = 39/396 (9%)
Query: 54 VLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXX 113
++K G F C + + S E A +F ++ E + MI + +
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 114 XXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLI 173
G D F + AC+ L + G Q+H ++G+ DD V+ L+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLV 309
Query: 174 SMYGKC---GAIKHACDVFEKMDEKSVASWSAII-GAHACAEMWHQCLMLLGDMSREGHW 229
MY KC G++ VF++M++ SV SW+A+I G + + + L +M +GH
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHV 369
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
T S AC +L P +G+ + G + N V S+I M+VKS +E
Sbjct: 370 EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAG- 348
F++++EK+ SY + G + + +A ++ SEI E L + +LS ++ G
Sbjct: 430 AFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGS 489
Query: 349 ----------LVNEGLQCFK-------------------NMQFEHKIKPTVQHYGCMVDL 379
+V GL C + + F V + M+
Sbjct: 490 IRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITG 549
Query: 380 LGRAGM---LREAYGLIKSMPIKPNDVVWRSLLSAC 412
+ G + E + + +KPN+V + ++LSAC
Sbjct: 550 FAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 158/391 (40%), Gaps = 44/391 (11%)
Query: 126 GIGP-DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKH 184
GI P D+ + LLK+C + G +H + + + D + N LIS+Y K G
Sbjct: 56 GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAK 115
Query: 185 ACDVFEKM---DEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
A DVFE M ++ V SWSA++ + + + + G + +V+
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG-LVPNDYCYTAVIR 174
Query: 242 ACIHLGSPNLGRCIHGILLRNIS-ELNVVVKTSLIDMYVKS-GCIEKGVCVFQNMAEKSR 299
AC + +GR G L++ E +V V SLIDM+VK E VF M+E +
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 300 FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS-----------HAG 348
++T+MI+ G EA++ F +++ G D V SAC+ H+
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW 294
Query: 349 LVNEGL-------------QCFKNMQFE--HKIKPTVQHYGCM------VDLLGRAGMLR 387
+ GL +C + + K+ ++ + M + +
Sbjct: 295 AIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 388 EAYGLIKSMP----IKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLN-PNNPGDYLVL 442
EA L M ++PN + S AC + +G+ + F +N +
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 443 ANMYARAHKWNDVARIRREMADKHLVQTPGF 473
+M+ ++ + D R +++K+LV F
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 223 MSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSG 282
M+R+G + T S+L +CI LG+ +H L+ E + V+ SLI +Y KSG
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 283 CIEKGVCVFQNM---AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVG 339
K VF+ M ++ S++ M++ +G +A++VF E LE GL P+D Y
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 340 VLSACSHAGLVNEGLQCF----KNMQFEHKIKPTVQHYGC-MVDLLGRA-GMLREAYGLI 393
V+ ACS++ V G K FE + GC ++D+ + AY +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDV-----CVGCSLIDMFVKGENSFENAYKVF 226
Query: 394 KSMPIKPNDVVWRSLLSAC 412
M + N V W +++ C
Sbjct: 227 DKMS-ELNVVTWTLMITRC 244
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/510 (37%), Positives = 299/510 (58%), Gaps = 31/510 (6%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKC------ 179
G+ PD + +CS L + G HG+V + G + N LI MY KC
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 180 -------------------------GAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
G + A + FE M EK++ SW+ II ++
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
+ + + M + A+ T++S+ SAC HLG+ +L + I+ + +N +L+V + T+L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
+DM+ + G E + +F ++ + ++T I +++ G+ A+++F +++E+GL PD
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
V +VG L+ACSH GLV +G + F +M H + P HYGCMVDLLGRAG+L EA LI+
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 395 SMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWND 454
MP++PNDV+W SLL+AC+V N+E+ AAEK+ +L P G Y++L+N+YA A +WND
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691
Query: 455 VARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGY 514
+A++R M +K L + PG S ++ K ++F S D S PE I M+ ++ + G+
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 751
Query: 515 KPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKF 574
PD S VL+DVDE EK L HS+KLA+A+ LI +++G+ +RI +NLR+CSDCH++ KF
Sbjct: 752 VPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKF 811
Query: 575 ISKICEREITVRDRFRFHHFKDGACSCKDY 604
SK+ REI +RD RFH+ + G CSC D+
Sbjct: 812 ASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 184/406 (45%), Gaps = 33/406 (8%)
Query: 38 LKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVA-TCALAKWGSMEYACSIFRQIEEPGS 96
LK CK+++E K H + K G D + LVA +C L S+ +A +F E G+
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 97 -FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
F YN++IRG S GI PD + +PF L AC+ GIQIHG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
+ K G D+FVQN L+ Y +CG + A VF++M E++V SW+++I +A +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
+ L M R+ T+V V+SAC L G ++ + + E+N ++ ++L+
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 276 DMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDV 335
DMY+K I+ +F + M S G EAL VF+ +++ G+ PD +
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 336 VYVGVLSACS-----------HAGLVNEGLQCFKNM-------------------QFEHK 365
+ +S+CS H ++ G + + N+ F+
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
TV + +V G + A+ ++MP K N V W +++S
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK-NIVSWNTIISG 443
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 167/381 (43%), Gaps = 37/381 (9%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
Q+H ++K+G+ D F ++LV A+ G ++ A +F ++ E + +MI G
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHF--YAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 109 -IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
+ P++ ++ AC+ L ++ G +++ + +G+ +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
+ + L+ MY KC AI A +F++ ++ +A+ + + + L + M G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN------------------------- 262
R + +++S +S+C L + G+ HG +LRN
Sbjct: 333 -VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 263 ------ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
+S VV S++ YV++G ++ F+ M EK+ S+ +ISGL
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 317 EALQVFSEIL-EEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGC 375
EA++VF + +EG+ D V + + SAC H G ++ + ++ ++ I+ V+
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE-KNGIQLDVRLGTT 510
Query: 376 MVDLLGRAGMLREAYGLIKSM 396
+VD+ R G A + S+
Sbjct: 511 LVDMFSRCGDPESAMSIFNSL 531
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 133/301 (44%), Gaps = 21/301 (6%)
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVS-IMNXXXXXXXXXXXXXXGIGPDNFIYPFL 137
G ++ A F + E +NT+I G V + G+ D +
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV 197
AC LG + I+ ++ K G+ D+ + L+ M+ +CG + A +F + + V
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
++W+A IGA A A + + L DM +G + + V L+AC H G G+ I
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFY 595
Query: 258 ILLR--NISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA-EKSRFSYTVMISGLSIHG- 313
+L+ +S +V ++D+ ++G +E+ V + ++M E + + +++ + G
Sbjct: 596 SMLKLHGVSPEDVHYGC-MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
Query: 314 -----HGAEALQVFSEILEEGLAPDDV-VYVGVLSACSHAGLVNEGLQCFKNMQFEHKIK 367
+ AE +QV LAP+ YV + + + AG N+ + +M+ + K
Sbjct: 655 VEMAAYAAEKIQV--------LAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRK 706
Query: 368 P 368
P
Sbjct: 707 P 707
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 333/590 (56%), Gaps = 34/590 (5%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
+ +H +K D F ++L+ C + G ++ AC +F I+E +N+MI G V
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLI-HCYFS-CGDLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
+ + + +L AC+ + ++ G Q+ ++ + V ++
Sbjct: 209 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW-------------- 213
+ N ++ MY KCG+I+ A +F+ M+EK +W+ ++ +A +E +
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 214 -----------------HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
++ L++ ++ + + + + TLVS LSAC +G+ LGR IH
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
+ ++ +N V ++LI MY K G +EK VF ++ ++ F ++ MI GL++HG G
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 317 EALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCM 376
EA+ +F ++ E + P+ V + V ACSH GLV+E F M+ + I P +HY C+
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 377 VDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNP 436
VD+LGR+G L +A I++MPI P+ VW +LL ACK+H NL + E+A +L L P N
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 437 GDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFD 496
G +++L+N+YA+ KW +V+ +R+ M L + PG S +E + +++F+S D + P +
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 628
Query: 497 TIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRER-LKHHSQKLAIAFTLIHTSEGSP 555
+Y +H++ +L+ GY+P+ SQVL ++E+E +E+ L HS+KLAI + LI T
Sbjct: 629 KVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKV 688
Query: 556 MRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+R+ +NLR+C DCH+ K IS++ +REI VRDR+RFHHF++G CSC D+W
Sbjct: 689 IRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 176/366 (48%), Gaps = 8/366 (2%)
Query: 5 TVLSQTHLLSLPSTP--PQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCD 62
+ S LSLP P ++ +T L++RC S+ + KQ H H+++ G F D
Sbjct: 2 AIFSTAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSD 61
Query: 63 SFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXX-XXXXX 121
+ S L A AL+ + S+EYA +F +I +P SF +NT+IR S +
Sbjct: 62 PYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDM 121
Query: 122 XXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGA 181
P+ + +PFL+KA + + + G +HG K+ VG D+FV N LI Y CG
Sbjct: 122 VSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD 181
Query: 182 IKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+ AC VF + EK V SW+++I + L L M E +A T+V VLS
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED-VKASHVTMVGVLS 240
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS 301
AC + + GR + + N +N+ + +++DMY K G IE +F M EK +
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
+T M+ G +I +E + E+L D V + ++SA G NE L F +Q
Sbjct: 301 WTTMLDGYAI----SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 356
Query: 362 FEHKIK 367
+ +K
Sbjct: 357 LQKNMK 362
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/575 (34%), Positives = 324/575 (56%), Gaps = 7/575 (1%)
Query: 35 YPL-LKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQ 90
+PL LK C K +H+ V+K GF D ++L++ + + G + A +F +
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGS--GRLNDAHKLFDE 171
Query: 91 IEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEG 150
I + + + G + G+ PD++ +L AC +G + G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 151 IQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACA 210
I ++ + + + FV+ L+++Y KCG ++ A VF+ M EK + +WS +I +A
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 211 EMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVV 270
+ + L M +E + + ++ ++V LS+C LG+ +LG ++ R+ N+ +
Sbjct: 292 SFPKEGIELFLQMLQE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFM 350
Query: 271 KTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGL 330
+LIDMY K G + +G VF+ M EK ISGL+ +GH + VF + + G+
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 331 APDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAY 390
+PD ++G+L C HAGL+ +GL+ F + + +K TV+HYGCMVDL GRAGML +AY
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAY 470
Query: 391 GLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAH 450
LI MP++PN +VW +LLS C++ + ++ E ++L L P N G+Y+ L+N+Y+
Sbjct: 471 RLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGG 530
Query: 451 KWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLE 510
+W++ A +R M K + + PG+S +E E KV++F++ D+S P D IY + + ++
Sbjct: 531 RWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Query: 511 FEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHT 570
G+ P T V DV+E+EK L +HS+KLA+A LI T G +R+ +NLR+C DCH
Sbjct: 591 LMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHE 650
Query: 571 YTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
K ISKI REI VRD RFH F +G+CSC DYW
Sbjct: 651 VMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 185/393 (47%), Gaps = 15/393 (3%)
Query: 12 LLSLPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVA 71
++++PS + ++ T L+ ++ KQ+H ++ D+F + L+
Sbjct: 3 IVTVPSATSKVQQIKT---------LISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLK 53
Query: 72 TCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDN 131
+ +Y+ +F + P F YN++I G V+ G+
Sbjct: 54 RTLFFR--QTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHG 111
Query: 132 FIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEK 191
F +P +LKAC+ K GI +H V K G D+ L+S+Y G + A +F++
Sbjct: 112 FTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE 171
Query: 192 MDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL 251
+ ++SV +W+A+ + + + + L M G + + +V VLSAC+H+G +
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG-VKPDSYFIVQVLSACVHVGDLDS 230
Query: 252 GRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSI 311
G I + + N V+T+L+++Y K G +EK VF +M EK +++ MI G +
Sbjct: 231 GEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYAS 290
Query: 312 HGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQ 371
+ E +++F ++L+E L PD VG LS+C+ G ++ G + ++ H+ +
Sbjct: 291 NSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLF 349
Query: 372 HYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV 404
++D+ + G + + + K M K D+V
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEM--KEKDIV 380
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 152 QIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAE 211
QIH + + D F+ N L+ K++ +F ++ ++++I
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 212 MWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVK 271
++H+ L L + + G + T VL AC S LG +H ++++ +V
Sbjct: 91 LFHETLDLFLSIRKHGLY-LHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 272 TSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLA 331
TSL+ +Y SG + +F + ++S ++T + SG + G EA+ +F +++E G+
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 332 PDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYG 391
PD V VLSAC H G ++ G K M+ E +++ +V+L + G + +A
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYME-EMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 392 LIKSMPIKPNDVVWRSLLSA 411
+ SM ++ + V W +++
Sbjct: 269 VFDSM-VEKDIVTWSTMIQG 287
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/621 (32%), Positives = 345/621 (55%), Gaps = 49/621 (7%)
Query: 28 RFNEQGWYPLLK---RCKSMEEFKQVHAHVLKLGFFCDSFCGS---NLVATCALAKWGSM 81
R ++ + P+LK + ++ E ++H K+ CD F + ++ A+C G +
Sbjct: 108 RLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASC-----GRI 162
Query: 82 EYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKAC 141
YA ++F ++ +NTMI + PD I ++ AC
Sbjct: 163 NYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
Query: 142 SLLGG-----------VKEGIQIHGHVFKA------GVG--------------DDIFVQN 170
G ++ +++ H+ A G G ++FV
Sbjct: 223 GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVST 282
Query: 171 GLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWR 230
++S Y KCG + A +F++ ++K + W+ +I A+ ++ + L + +M G +
Sbjct: 283 AMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG-IK 341
Query: 231 AEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCV 290
+ ++ SV+SAC +LG + + +H + N E + + +LI+MY K G ++ V
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 291 FQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLV 350
F+ M ++ S++ MI+ LS+HG ++AL +F+ + +E + P++V +VGVL CSH+GLV
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 351 NEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLS 410
EG + F +M E+ I P ++HYGCMVDL GRA +LREA +I+SMP+ N V+W SL+S
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
Query: 411 ACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQT 470
AC++H LE+G+ AA+++ L P++ G ++++N+YAR +W DV IRR M +K++ +
Sbjct: 522 ACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
Query: 471 PGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEK 530
G S ++ K ++F+ D+ + + IY + ++ +L+ GY PD VL+DV+E+EK
Sbjct: 582 KGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEK 641
Query: 531 RERLKHHSQKLAIAFTLIHTSEGSP------MRISRNLRLCSDCHTYTKFISKICEREIT 584
++ + HS+KLA+ F L++ + +RI +NLR+C DCH + K +SK+ EREI
Sbjct: 642 KDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREII 701
Query: 585 VRDRFRFHHFKDGACSCKDYW 605
VRDR RFH +K+G CSC+DYW
Sbjct: 702 VRDRTRFHCYKNGLCSCRDYW 722
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 195/435 (44%), Gaps = 44/435 (10%)
Query: 13 LSLPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVAT 72
++LP PP S + E+ L CKS+ KQ+HAH+L+ + S L
Sbjct: 1 MTLP--PPIASTAANTILEK-----LSFCKSLNHIKQLHAHILRT--VINHKLNSFLFNL 51
Query: 73 CALAKWGSMEYACSIFRQIEEPG-SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDN 131
+ ++ YA ++F I P S +N +R G D
Sbjct: 52 SVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQ 111
Query: 132 FIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEK 191
F + +LKA S + + EG+++HG FK D FV+ G + MY CG I +A +VF++
Sbjct: 112 FSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDE 171
Query: 192 MDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL 251
M + V +W+ +I + + + L +M ++ + +E L +++SAC G+
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRY 230
Query: 252 GRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSI 311
R I+ L+ N ++ + T+L+ MY +GC++ F+ M+ ++ F T M+SG S
Sbjct: 231 NRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSK 290
Query: 312 HG-------------------------------HGAEALQVFSEILEEGLAPDDVVYVGV 340
G + EAL+VF E+ G+ PD V V
Sbjct: 291 CGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSV 350
Query: 341 LSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKP 400
+SAC++ G++++ + + ++ + ++++ + G L + + MP +
Sbjct: 351 ISACANLGILDKAKWVHSCIHV-NGLESELSINNALINMYAKCGGLDATRDVFEKMP-RR 408
Query: 401 NDVVWRSLLSACKVH 415
N V W S+++A +H
Sbjct: 409 NVVSWSSMINALSMH 423
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 319/574 (55%), Gaps = 9/574 (1%)
Query: 37 LLKRCKSMEEFKQ---VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
LLK C + + VHA V +LGF D F + L+A AK + A ++F +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIAL--YAKCRRLGSARTVFEGLPL 182
Query: 94 PGS--FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGI 151
P + ++ + PD +L A + L +K+G
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 152 QIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAE 211
IH V K G+ + + L +MY KCG + A +F+KM ++ W+A+I +A
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 212 MWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVK 271
+ + + +M + R + ++ S +SAC +GS R ++ + R+ +V +
Sbjct: 303 YAREAIDMFHEMINKD-VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 272 TSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLA 331
++LIDM+ K G +E VF ++ ++ MI G +HG EA+ ++ + G+
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 332 PDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYG 391
P+DV ++G+L AC+H+G+V EG F M +HKI P QHY C++DLLGRAG L +AY
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 392 LIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHK 451
+IK MP++P VW +LLSACK H ++E+GE AA++LF ++P+N G Y+ L+N+YA A
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 452 WNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEF 511
W+ VA +R M +K L + G S VE ++ F D+S P ++ I + +E +L+
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Query: 512 EGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTY 571
G+ + L D++++E E L HS+++AIA+ LI T +G+P+RI++NLR C +CH
Sbjct: 601 GGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAA 660
Query: 572 TKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
TK ISK+ +REI VRD RFHHFKDG CSC DYW
Sbjct: 661 TKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 187/412 (45%), Gaps = 38/412 (9%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
L+ + KQ+HA +L LG F + L+ A + +G + +A +F + P
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQI 84
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGH 156
F +N +IRG + + PD+F +P LLKACS L ++ G +H
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 157 VFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFE--KMDEKSVASWSAIIGAHACAEMWH 214
VF+ G D+FVQNGLI++Y KC + A VFE + E+++ SW+AI+ A+A
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
+ L + M R+ + + LVSVL+A L GR IH +++ E+ + SL
Sbjct: 205 EALEIFSQM-RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
MY K G + +F M + + MISG + +G+ EA+ +F E++ + + PD
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323
Query: 335 VVYVGVLSACSHAGLVNEGLQCFK------------------------------NMQFEH 364
+ +SAC+ G + + ++ + F+
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 365 KIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSACK 413
+ V + M+ G G REA L ++M + PNDV + LL AC
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN 435
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/550 (37%), Positives = 310/550 (56%), Gaps = 40/550 (7%)
Query: 96 SFEYNTMIRG---NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQ 152
SF +N +IR NVS + PD +PFLL + + G +
Sbjct: 24 SFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFE---------------------- 190
H + G+ D FV+ L++MY CG ++ A VF+
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 191 ---------KMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS----REGHWRAEESTLV 237
+M E++V SWS +I + + + L L +M E R E T+
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 238 SVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK 297
+VLSAC LG+ G+ +H + + E+++V+ T+LIDMY K G +E+ VF + K
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 298 SRF-SYTVMISGLSIHGHGAEALQVFSEIL-EEGLAPDDVVYVGVLSACSHAGLVNEGLQ 355
+Y+ MI L+++G E Q+FSE+ + + P+ V +VG+L AC H GL+NEG
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 356 CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
FK M E I P++QHYGCMVDL GR+G+++EA I SMP++P+ ++W SLLS ++
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 416 LNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSM 475
+++ E A ++L L+P N G Y++L+N+YA+ +W +V IR EM K + + PG S
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 476 VEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLK 535
VE E V++FV D SQ E + IY M+ ++ +L GY DT +VLLD++E +K L
Sbjct: 444 VEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALS 503
Query: 536 HHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFK 595
+HS+KLAIAF L+ T G+P+RI +NLR+C DCH K ISK+ REI VRD RFHHF+
Sbjct: 504 YHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFR 563
Query: 596 DGACSCKDYW 605
DG+CSC+D+W
Sbjct: 564 DGSCSCRDFW 573
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/579 (35%), Positives = 316/579 (54%), Gaps = 8/579 (1%)
Query: 32 QGWYPLLKRC---KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIF 88
G+ LL C +++ + ++VHAH++K + ++ + L+ K +E A +
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLL--IFYGKCDCLEDARKVL 110
Query: 89 RQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVK 148
++ E + MI + P+ F + +L +C G+
Sbjct: 111 DEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLG 170
Query: 149 EGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
G QIHG + K IFV + L+ MY K G IK A ++FE + E+ V S +AII +A
Sbjct: 171 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYA 230
Query: 209 CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNV 268
+ + L + + EG T S+L+A L + G+ H +LR
Sbjct: 231 QLGLDEEALEMFHRLHSEG-MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA 289
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
V++ SLIDMY K G + +F NM E++ S+ M+ G S HG G E L++F + +E
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDE 349
Query: 329 G-LAPDDVVYVGVLSACSHAGLVNEGLQCFKNM-QFEHKIKPTVQHYGCMVDLLGRAGML 386
+ PD V + VLS CSH + + GL F M E+ KP +HYGC+VD+LGRAG +
Sbjct: 350 KRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRI 409
Query: 387 REAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMY 446
EA+ IK MP KP V SLL AC+VHL+++IGE +L + P N G+Y++L+N+Y
Sbjct: 410 DEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLY 469
Query: 447 ARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQME 506
A A +W DV +R M K + + PG S ++ E+ ++ F + DR+ P + + + ++
Sbjct: 470 ASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEIS 529
Query: 507 WQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCS 566
+++ GY PD S VL DVDE++K + L HS+KLA+ F LI T EG P+R+ +NLR+C
Sbjct: 530 IKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICV 589
Query: 567 DCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
DCH + K SK+ ERE+++RD+ RFH DG CSC DYW
Sbjct: 590 DCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/563 (35%), Positives = 316/563 (56%), Gaps = 14/563 (2%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFE---YNTMIR 104
KQVH H +K+ DSF + L+ A ++ M+ A +F E +F+ +N M+
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALID--AYSRNRCMKEAEILF----ERHNFDLVAWNAMMA 490
Query: 105 GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGD 164
G + G D+F + K C L + +G Q+H + K+G
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ--CLMLLGD 222
D++V +G++ MY KCG + A F+ + +W+ +I C E + +
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG--CIENGEEERAFHVFSQ 608
Query: 223 MSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSG 282
M G +E T+ ++ A L + GR IH L+ + V TSL+DMY K G
Sbjct: 609 MRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCG 667
Query: 283 CIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLS 342
I+ C+F+ + + ++ M+ GL+ HG G E LQ+F ++ G+ PD V ++GVLS
Sbjct: 668 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Query: 343 ACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPND 402
ACSH+GLV+E + ++M ++ IKP ++HY C+ D LGRAG++++A LI+SM ++ +
Sbjct: 728 ACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASA 787
Query: 403 VVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREM 462
++R+LL+AC+V + E G+ A KL L P + Y++L+NMYA A KW+++ R M
Sbjct: 788 SMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMM 847
Query: 463 ADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVL 522
+ + PGFS +E + K++ FV DRS + + IY + M ++ EGY P+T L
Sbjct: 848 KGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTL 907
Query: 523 LDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICERE 582
+DV+E+EK L +HS+KLA+AF L+ T +P+R+ +NLR+C DCH K+I+K+ RE
Sbjct: 908 VDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNRE 967
Query: 583 ITVRDRFRFHHFKDGACSCKDYW 605
I +RD RFH FKDG CSC DYW
Sbjct: 968 IVLRDANRFHRFKDGICSCGDYW 990
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA----C 209
H + + F+ N LISMY KCG++ +A VF+KM ++ + SW++I+ A+A C
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 210 AEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
Q LL + R+ TL +L C+H G HG + + +
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
V +L+++Y+K G +++G +F+ M + + +M+ G EA+ + S G
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 330 LAPDDVV 336
L P+++
Sbjct: 242 LNPNEIT 248
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 12/243 (4%)
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
D ++ +LKA +G +E I + +G+ + L + G
Sbjct: 210 DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFA 269
Query: 190 EKMDEKSVASWSAIIGAHACAEMWHQ-----CLMLLGDMSREGHWRAEESTLVSVLSACI 244
D SV+ I +E H L DM E ++ T + +L+ +
Sbjct: 270 NGNDASSVSE--IIFRNKGLSEYLHSGQYSALLKCFADMV-ESDVECDQVTFILMLATAV 326
Query: 245 HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
+ S LG+ +H + L+ +L + V SLI+MY K VF NM+E+ S+
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
+I+G++ +G EA+ +F ++L GL PD VL A S + EGL K + H
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHV-H 442
Query: 365 KIK 367
IK
Sbjct: 443 AIK 445
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 10/182 (5%)
Query: 34 WYPLLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQ 90
W+ L+ + + K HA +L + F +NL++ +K GS+ YA +F +
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISM--YSKCGSLTYARRVFDK 99
Query: 91 IEEPGSFEYNTMIRGNVS-----IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG 145
+ + +N+++ + N + +LK C G
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 146 GVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIG 205
V HG+ K G+ D FV L+++Y K G +K +FE+M + V W+ ++
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 206 AH 207
A+
Sbjct: 220 AY 221
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/429 (42%), Positives = 269/429 (62%), Gaps = 6/429 (1%)
Query: 182 IKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+ + D+F KM +KS+ SW+ +IG + M + + L M +G + + ++ SVL
Sbjct: 259 VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-FEPDAVSITSVLP 317
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS 301
AC + +LG+ IHG + R N++++ +LIDMY K GC+EK VF+NM + S
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
+T MIS G G +A+ +FS++ + GL PD + +V L+ACSHAGL+ EG CFK M
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIG 421
+KI P ++H CMVDLLGRAG ++EAY I+ M ++PN+ VW +LL AC+VH + +IG
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Query: 422 EIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERK 481
+AA+KLF L P G Y++L+N+YA+A +W +V IR M K L + PG S VE R
Sbjct: 498 LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRI 557
Query: 482 VYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKL 541
++ F+ DRS P+ D IY + + +++ GY PD+ L DV+E++K L HS+KL
Sbjct: 558 IHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKL 617
Query: 542 AIAFTLIHTSE-----GSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKD 596
AI F L++T E + +RI++NLR+C DCH K IS+I REI +RD RFH F+
Sbjct: 618 AIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRF 677
Query: 597 GACSCKDYW 605
G CSC DYW
Sbjct: 678 GVCSCGDYW 686
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 164/369 (44%), Gaps = 40/369 (10%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+ + VH+ ++ C+S G L+ A A + A +F +I E N MI
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMR--AYASLKDVASARKVFDEIPERNVIIINVMI 112
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
R V+ + PD++ +P +LKACS G + G +IHG K G+
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
+FV NGL+SMYGKCG + A V ++M + V SW++++ +A + + L + +M
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC 283
+ T+ S+L A + + N+ MYVK
Sbjct: 233 -ESVKISHDAGTMASLLPAVSNTTTENV-------------------------MYVKD-- 264
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+F M +KS S+ VMI + EA++++S + +G PD V VL A
Sbjct: 265 ------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV 403
C ++ G + ++ K+ P + ++D+ + G L +A + ++M K DV
Sbjct: 319 CGDTSALSLGKKIHGYIE-RKKLIPNLLLENALIDMYAKCGCLEKARDVFENM--KSRDV 375
Query: 404 V-WRSLLSA 411
V W +++SA
Sbjct: 376 VSWTAMISA 384
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 131/313 (41%), Gaps = 15/313 (4%)
Query: 32 QGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQI 91
Q + L+ C+ ME K H D+ ++L+ + ++ Y +F ++
Sbjct: 220 QRFDDALEVCREMESVKISH----------DAGTMASLLPAVSNTTTENVMYVKDMFFKM 269
Query: 92 EEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGI 151
+ +N MI + G PD +L AC + G
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 152 QIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAE 211
+IHG++ + + ++ ++N LI MY KCG ++ A DVFE M + V SW+A+I A+ +
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 212 MWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVK 271
+ L + G + V+ L+AC H G GR ++ + +
Sbjct: 390 RGCDAVALFSKLQDSG-LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 272 TS-LIDMYVKSGCIEKGVCVFQNMA-EKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
+ ++D+ ++G +++ Q+M+ E + + ++ +H L ++ +
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ-- 506
Query: 330 LAPDDVVYVGVLS 342
LAP+ Y +LS
Sbjct: 507 LAPEQSGYYVLLS 519
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/602 (35%), Positives = 325/602 (53%), Gaps = 34/602 (5%)
Query: 38 LKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSF 97
L C ++ + KQ+H HVL+ G + + L+ T YA + ++ F
Sbjct: 56 LDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 98 EYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHV 157
+ +IRG I P +F + LLKAC + + G Q H
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 158 FKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA------CAE 211
F+ ++V N +I MY KC +I A VF++M E+ V SW+ +I A+A CA
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 212 MWHQCL----------MLLG--------------DMSREGHWRAEESTLVSVLSACIHLG 247
+ L M+ G D + RA+E T+ +SAC LG
Sbjct: 236 ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 248 SPNLG-RCIHGILLRNISELN-VVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
+ R + S + VV+ ++LIDMY K G +E+ V VF +M K+ F+Y+ M
Sbjct: 296 ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSM 355
Query: 306 ISGLSIHGHGAEALQVFSEILEEG-LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
I GL+ HG EAL +F ++ + + P+ V +VG L ACSH+GLV++G Q F +M
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTF 415
Query: 365 KIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIA 424
++PT HY CMVDLLGR G L+EA LIK+M ++P+ VW +LL AC++H N EI EIA
Sbjct: 416 GVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIA 475
Query: 425 AEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFS-MVEAERKVY 483
AE LF L P+ G+Y++L+N+YA A W V R+R+ + +K L +TP S +V+ +++
Sbjct: 476 AEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMH 535
Query: 484 KFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAI 543
KF + + P + I + + ++ +L GY+PD S V DV ++ KR L H++KLA+
Sbjct: 536 KFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLAL 595
Query: 544 AFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKD 603
AF+L+ T+ S + I +NLR+C DCH + + S++ + I +RD RFHHF+ G CSC D
Sbjct: 596 AFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGD 655
Query: 604 YW 605
+W
Sbjct: 656 FW 657
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/535 (38%), Positives = 302/535 (56%), Gaps = 13/535 (2%)
Query: 74 ALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFI 133
L K G ++ A IF ++ E + TM+ G + P+
Sbjct: 181 GLCKEGRVDEAREIFDEMSERSVITWTTMVTG------YGQNNRVDDARKIFDVMPEKTE 234
Query: 134 YPFLLKACSLLGGVKEG-IQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKM 192
+ L+G V+ G I+ +F+ + N +IS G+ G I A VF+ M
Sbjct: 235 VSW---TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSM 291
Query: 193 DEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
E++ ASW +I H + L L M ++G R TL+S+LS C L S + G
Sbjct: 292 KERNDASWQTVIKIHERNGFELEALDLFILMQKQGV-RPTFPTLISILSVCASLASLHHG 350
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
+ +H L+R +++V V + L+ MY+K G + K +F K + +ISG + H
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 313 GHGAEALQVFSEI-LEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQ 371
G G EAL+VF E+ L P++V +V LSACS+AG+V EGL+ +++M+ +KP
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 372 HYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFML 431
HY CMVD+LGRAG EA +I SM ++P+ VW SLL AC+ H L++ E A+KL +
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEI 530
Query: 432 NPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQD-R 490
P N G Y++L+NMYA +W DVA +R+ M + + ++PG S E E KV+ F
Sbjct: 531 EPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGIN 590
Query: 491 SQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHT 550
S PE ++I ++ +++ L GY PD S L DVDE+EK LK+HS++LA+A+ L+
Sbjct: 591 SHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKL 650
Query: 551 SEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
SEG P+R+ +NLR+CSDCHT K ISK+ EREI +RD RFHHF++G CSCKDYW
Sbjct: 651 SEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 25/268 (9%)
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
+I NGL+S Y K G I A VF+ M E++V SW+A++ + H + D++
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYV-----HNGKV---DVA 129
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGI-LLRNISELNVVVKTSLIDMYVKSGC 283
W+ E VS + +G GR L I + + + +TS+I K G
Sbjct: 130 ESLFWKMPEKNKVSW--TVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGR 187
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+++ +F M+E+S ++T M++G + +A ++F + E+ +V + +L
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMG 243
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV 403
G + + + F+ M +KP + M+ LG+ G + +A + SM + ND
Sbjct: 244 YVQNGRIEDAEELFEVM----PVKPVIA-CNAMISGLGQKGEIAKARRVFDSMKER-NDA 297
Query: 404 VWRSLLSACKVHLNLEIGEIAAEKLFML 431
W++++ K+H E+ A LF+L
Sbjct: 298 SWQTVI---KIHERNGF-ELEALDLFIL 321
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 128/293 (43%), Gaps = 29/293 (9%)
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG-- 227
N I+ + G I A +F+ D KS++SW++++ + M L +M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
W ++S + G + R + ++ E NVV T+L+ YV +G ++
Sbjct: 81 SWNG-------LVSGYMKNGEIDEARKVFDLM----PERNVVSWTALVKGYVHNGKVDVA 129
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
+F M EK++ S+TVM+ G G +A +++ I ++ D++ ++
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKE 185
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
G V+E + F M + +V + MV G+ + +A + MP K +V W S
Sbjct: 186 GRVDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK-TEVSWTS 239
Query: 408 LLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRR 460
+L + +E AE+LF + P P + M + + ++A+ RR
Sbjct: 240 MLMGYVQNGRIE----DAEELFEVMPVKP--VIACNAMISGLGQKGEIAKARR 286
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/574 (36%), Positives = 312/574 (54%), Gaps = 12/574 (2%)
Query: 41 CKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE-PGSFEY 99
C ++ KQ+H + GF DS+ N +K G + A S+F ++E +
Sbjct: 151 CDRVDLIKQLHCFSVSGGF--DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSW 208
Query: 100 NTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFK 159
N+MI G D F +L A + L + G Q HG + K
Sbjct: 209 NSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK 268
Query: 160 AGVGDDIFVQNGLISMYGKCGAIKHACD---VFEKMDEKSVASWSAIIGAHAC-AEMWHQ 215
AG + V +GLI Y KCG D VF+++ + W+ +I ++ E+ +
Sbjct: 269 AGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEE 328
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN-ISELNVVVKTSL 274
+ M R GH R ++ + V V SAC +L SP+ + IHG+ +++ I + V +L
Sbjct: 329 AVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
I +Y KSG ++ VF M E + S+ MI G + HGHG EAL ++ +L+ G+AP+
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
+ +V VLSAC+H G V+EG + F M+ KI+P +HY CM+DLLGRAG L EA I
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507
Query: 395 SMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWND 454
+MP KP V W +LL AC+ H N+ + E AA +L ++ P Y++LANMYA A KW +
Sbjct: 508 AMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEE 567
Query: 455 VARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGY 514
+A +R+ M K + + PG S +E ++K + FV++D S P + + +M +++ GY
Sbjct: 568 MASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627
Query: 515 KPDTSQVLLDVDEDEKRE---RLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTY 571
D ++ DE + + RL HHS+KLA+AF L+ T +G + + +NLR+C DCH
Sbjct: 628 VMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNA 687
Query: 572 TKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
KF+S + REI VRD RFH FKDG CSC DYW
Sbjct: 688 IKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 140/329 (42%), Gaps = 8/329 (2%)
Query: 74 ALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFI 133
A AK + A +F +I +P + YNT+I G G D F
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
L+ AC V Q+H G V N ++ Y K G ++ A VF MD
Sbjct: 143 LSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 194 E-KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
E + SW+++I A+ + + L L +M +G ++ + TL SVL+A L G
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG-FKIDMFTLASVLNALTSLDHLIGG 259
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVK-SGC--IEKGVCVFQNMAEKSRFSYTVMISGL 309
R HG L++ N V + LID Y K GC + VFQ + + MISG
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGY 319
Query: 310 SIHGH-GAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKP 368
S++ EA++ F ++ G PDD +V V SACS+ ++ Q H
Sbjct: 320 SMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSN 379
Query: 369 TVQHYGCMVDLLGRAGMLREAYGLIKSMP 397
+ ++ L ++G L++A + MP
Sbjct: 380 RISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 122/310 (39%), Gaps = 34/310 (10%)
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHAC 209
G +H K+ V ++ N +++Y KCG + +A F +E +V S++ I+ A+A
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 210 AEMWHQCLMLLGDMSR----------EGHWRAEESTLVSVLSACIH-LGSPNLGRCIHGI 258
H L ++ + G+ A E+ VL + LG G + G+
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 259 LLRNISELNVV-----------------VKTSLIDMYVKSGCIEKGVCVFQNMAE-KSRF 300
+ ++++ V + + Y K G + + V VF M E +
Sbjct: 147 IAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV 206
Query: 301 SYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM 360
S+ MI H GA+AL ++ E++ +G D VL+A + + G Q F
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ-FHGK 265
Query: 361 QFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP--IKPNDVVWRSLLSACKVHLNL 418
+ ++D + G Y K + P+ VVW +++S +N
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG--YSMNE 323
Query: 419 EIGEIAAEKL 428
E+ E A +
Sbjct: 324 ELSEEAVKSF 333
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/486 (38%), Positives = 297/486 (61%), Gaps = 14/486 (2%)
Query: 127 IGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHAC 186
I P NF LKAC L ++ G IH + K D V N L+ +Y + G A
Sbjct: 232 IEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDAR 291
Query: 187 DVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG---HWRAEESTLVSVLSAC 243
VF+ M E++V +W+++I + H+ L M E W +TL ++L AC
Sbjct: 292 KVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSW----ATLTTILPAC 347
Query: 244 IHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYT 303
+ + G+ IH +L++ + +V + SL+DMY K G +E VF M K S+
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWN 407
Query: 304 VMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE 363
+M++ +I+G+ E + +F ++E G+APD + +V +LS CS GL GL F+ M+ E
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTE 467
Query: 364 HKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEI 423
++ P ++HY C+VD+LGRAG ++EA +I++MP KP+ +W SLL++C++H N+ +GEI
Sbjct: 468 FRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEI 527
Query: 424 AAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVY 483
AA++LF+L P+NPG+Y++++N+YA A W++V +IR M + + + G S V+ + K+
Sbjct: 528 AAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQ 587
Query: 484 KFVS----QDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQ 539
FV+ + R+ E+ ++ +++ +E GY P+TS VL DVDE+ K + HS+
Sbjct: 588 IFVAGGGYEFRNSDEYKKVWT---ELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSE 644
Query: 540 KLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGAC 599
+LA ++LIHT EG P+RI++NLR+C+DCH++ K +S++ R I +RD RFHHF DG C
Sbjct: 645 RLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGIC 704
Query: 600 SCKDYW 605
SCKDYW
Sbjct: 705 SCKDYW 710
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/560 (35%), Positives = 308/560 (55%), Gaps = 5/560 (0%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
KQ+HA +K G D F G + A K + A +F +I E +N I +V
Sbjct: 128 KQIHALAVKCGRILDVFVGCS--AFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 185
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
+ P++ + L ACS + G+Q+HG V ++G D+
Sbjct: 186 TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
V NGLI YGKC I+ + +F +M K+ SW +++ A+ + +L SR+
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY-LRSRKD 304
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
+ + SVLSAC + LGR IH ++ E + V ++L+DMY K GCIE
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAP--DDVVYVGVLSACS 345
F M EK+ + +I G + G AL +F E+ G P + + +V +LSACS
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 346 HAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVW 405
AG V G++ F +M+ + I+P +HY C+VD+LGRAGM+ AY IK MPI+P VW
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 406 RSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADK 465
+L +AC++H ++G +AAE LF L+P + G++++L+N +A A +W + +R E+
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 466 HLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDV 525
+ + G+S + + +V+ F ++DRS I + ++ ++E GYKPD L D+
Sbjct: 545 GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 604
Query: 526 DEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITV 585
+E+EK + HHS+KLA+AF L+ P+RI++NLR+C DCH++ KF+S +REI V
Sbjct: 605 EEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 664
Query: 586 RDRFRFHHFKDGACSCKDYW 605
RD RFH FKDG CSCKDYW
Sbjct: 665 RDNNRFHRFKDGICSCKDYW 684
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 13/289 (4%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ P++F +P KA + L G QIH K G D+FV MY K A
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSR-EGHWRAEESTLVSVLSACI 244
+F+++ E+++ +W+A I + + + R +GH T + L+AC
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH--PNSITFCAFLNACS 220
Query: 245 HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
NLG +HG++LR+ + +V V LID Y K I +F M K+ S+
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCS 280
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
+++ + +A ++ ++ + D + VLSAC AG+ GL+ +++ H
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMA--GLELGRSIH-AH 335
Query: 365 KIKPTVQHY----GCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
+K V+ +VD+ G+ G + ++ MP K N V SL+
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLI 383
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 4/277 (1%)
Query: 136 FLLKACSLLGGVKEGIQIHGHVFKA-GVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDE 194
LLK ++ G +H + K F+ N LI+MY K + A V
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 195 KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRC 254
++V SW+++I A + L+ +M REG + T A L P G+
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREG-VVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 255 IHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGH 314
IH + ++ L+V V S DMY K+ + +F + E++ ++ IS G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 315 GAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
EA++ F E P+ + + L+ACS +N G+Q + V
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ-LHGLVLRSGFDTDVSVCN 248
Query: 375 CMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
++D G+ +R + + M K N V W SL++A
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 284
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/634 (34%), Positives = 335/634 (52%), Gaps = 66/634 (10%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
LL CK++ Q+H +K G DS+ L+ CA++ ++ YA + EP +
Sbjct: 11 LLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDA 70
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXG-IGPDNFIYPFLLKAC----SLLGG----- 146
F +NT++RG G + PD+F + F++KA SL G
Sbjct: 71 FMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHC 130
Query: 147 --VKEGIQIHGHVFKAGVG----------------------------------------- 163
+K G++ H V +G
Sbjct: 131 QALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAG 190
Query: 164 -----DDIFVQNG-----LISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
D + V+N +++ Y K G ++ A +F +M + SWS +I A +
Sbjct: 191 AREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSF 250
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
++ + ++ R G E +L VLSAC GS G+ +HG + + V V +
Sbjct: 251 NESFLYFRELQRAG-MSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNA 309
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKS-RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAP 332
LIDMY + G + VF+ M EK S+T MI+GL++HG G EA+++F+E+ G+ P
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTP 369
Query: 333 DDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL 392
D + ++ +L ACSHAGL+ EG F M+ + I+P ++HYGCMVDL GR+G L++AY
Sbjct: 370 DGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDF 429
Query: 393 IKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKW 452
I MPI P +VWR+LL AC H N+E+ E ++L L+PNN GD ++L+N YA A KW
Sbjct: 430 ICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKW 489
Query: 453 NDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFE 512
DVA IR+ M + + +T +S+VE + +YKF + ++ + + + ++ +L+ E
Sbjct: 490 KDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDE 549
Query: 513 -GYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTY 571
GY P+ + L DV+E+EK +++ HS+KLA+AF L S+G+ +RI +NLR+C DCH
Sbjct: 550 AGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAV 609
Query: 572 TKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
K SK+ EI VRDR RFH FKDG+CSC+DYW
Sbjct: 610 MKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 301/530 (56%), Gaps = 6/530 (1%)
Query: 76 AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYP 135
K+ + A +F Q+ + + TMI + P+ + Y
Sbjct: 107 VKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYS 166
Query: 136 FLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK 195
+L++C+ + V+ +H + K G+ D+FV++ LI ++ K G + A VF++M
Sbjct: 167 SVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG 223
Query: 196 SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCI 255
W++IIG A L L M R G + AE++TL SVL AC L LG
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAG-FIAEQATLTSVLRACTGLALLELGMQA 282
Query: 256 HGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHG 315
H +++ +L ++ +L+DMY K G +E + VF M E+ +++ MISGL+ +G+
Sbjct: 283 HVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYS 340
Query: 316 AEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGC 375
EAL++F + G P+ + VGVL ACSHAGL+ +G F++M+ + I P +HYGC
Sbjct: 341 QEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC 400
Query: 376 MVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNN 435
M+DLLG+AG L +A L+ M +P+ V WR+LL AC+V N+ + E AA+K+ L+P +
Sbjct: 401 MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPED 460
Query: 436 PGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEF 495
G Y +L+N+YA + KW+ V IR M D+ + + PG S +E ++++ F+ D S P+
Sbjct: 461 AGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQI 520
Query: 496 DTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSP 555
+ ++Q+ +L GY P+T+ VL D++ ++ + L+HHS+KLA+AF L+
Sbjct: 521 VEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKV 580
Query: 556 MRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+RI +NLR+C DCH + K SK+ R I +RD R+HHF+DG CSC DYW
Sbjct: 581 IRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 163/371 (43%), Gaps = 39/371 (10%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ D+ Y L+K C V EG I H++ G +F+ N LI+MY K + A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
+F++M +++V SW+ +I A++ ++ + L LL M R+ + R T SVL +C
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD-NVRPNVYTYSSVLRSCNG 174
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
+ + C GI+ + E +V V+++LID++ K G E + VF M + +
Sbjct: 175 MSDVRMLHC--GIIKEGL-ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM----- 360
I G + + AL++F + G + VL AC+ L+ G+Q ++
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ 291
Query: 361 -----------------------QFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL---IK 394
F + V + M+ L + G +EA L +K
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351
Query: 395 SMPIKPNDVVWRSLLSACKVHLNLEIGEI---AAEKLFMLNPNNPGDYLVLANMYARAHK 451
S KPN + +L AC LE G + +KL+ ++P Y + ++ +A K
Sbjct: 352 SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE-HYGCMIDLLGKAGK 410
Query: 452 WNDVARIRREM 462
+D ++ EM
Sbjct: 411 LDDAVKLLNEM 421
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/562 (35%), Positives = 314/562 (55%), Gaps = 4/562 (0%)
Query: 45 EEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIR 104
E+ + +H V+ G F + G+ LV+ K G M + + Q+ +N +I
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSM--YGKIGEMSESRRVLLQMPRRDVVAWNALIG 436
Query: 105 GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE-GIQIHGHVFKAGVG 163
G + G+ + +L AC L G + E G +H ++ AG
Sbjct: 437 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 496
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
D V+N LI+MY KCG + + D+F +D +++ +W+A++ A+A + L L+ M
Sbjct: 497 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC 283
G ++ + LSA L G+ +HG+ ++ E + + + DMY K G
Sbjct: 557 RSFG-VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 615
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
I + V + +S S+ ++IS L HG+ E F E+LE G+ P V +V +L+A
Sbjct: 616 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 675
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV 403
CSH GLV++GL + + + ++P ++H C++DLLGR+G L EA I MP+KPND+
Sbjct: 676 CSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL 735
Query: 404 VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMA 463
VWRSLL++CK+H NL+ G AAE L L P + Y++ +NM+A +W DV +R++M
Sbjct: 736 VWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMG 795
Query: 464 DKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLL 523
K++ + S V+ + KV F DR+ P+ IY + ++ ++ GY DTSQ L
Sbjct: 796 FKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQ 855
Query: 524 DVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREI 583
D DE++K L +HS++LA+A+ L+ T EGS +RI +NLR+CSDCH+ KF+S++ R I
Sbjct: 856 DTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRI 915
Query: 584 TVRDRFRFHHFKDGACSCKDYW 605
+RD++RFHHF+ G CSCKDYW
Sbjct: 916 VLRDQYRFHHFERGLCSCKDYW 937
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 164/378 (43%), Gaps = 16/378 (4%)
Query: 40 RCKSM-EEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFE 98
R SM E QVH V K G D + + ++ + +G + + +F ++ +
Sbjct: 70 RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV--YGLVSCSRKVFEEMPDRNVVS 127
Query: 99 YNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVF 158
+ +++ G G+G + ++ +C LL G QI G V
Sbjct: 128 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 187
Query: 159 KAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLM 218
K+G+ + V+N LISM G G + +A +F++M E+ SW++I A+A +
Sbjct: 188 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 247
Query: 219 LLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMY 278
+ M R H +T+ ++LS H+ GR IHG++++ + V V +L+ MY
Sbjct: 248 IFSLM-RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 306
Query: 279 VKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYV 338
+G + VF+ M K S+ +++ G +AL + ++ G + + V +
Sbjct: 307 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 366
Query: 339 GVLSAC-----SHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
L+AC G + GL + + I +V + G+ G + E+ ++
Sbjct: 367 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG------NALVSMYGKIGEMSESRRVL 420
Query: 394 KSMPIKPNDVVWRSLLSA 411
MP + + V W +L+
Sbjct: 421 LQMP-RRDVVAWNALIGG 437
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 159/337 (47%), Gaps = 4/337 (1%)
Query: 76 AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYP 135
K+G ++ A +F + +NTM+ G V + GI P +F+
Sbjct: 3 TKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIA 62
Query: 136 FLLKACSLLGGV-KEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDE 194
L+ AC G + +EG+Q+HG V K+G+ D++V ++ +YG G + + VFE+M +
Sbjct: 63 SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD 122
Query: 195 KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRC 254
++V SW++++ ++ + + + M EG E+++ V+S+C L +LGR
Sbjct: 123 RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG-VGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 255 IHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGH 314
I G ++++ E + V+ SLI M G ++ +F M+E+ S+ + + + +GH
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 315 GAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
E+ ++FS + + +LS H G + + + V
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG-RGIHGLVVKMGFDSVVCVCN 300
Query: 375 CMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
++ + AG EA + K MP K + + W SL+++
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 12/300 (4%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+E K +HA+++ GF D ++L+ AK G + + +F ++ +N M+
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITM--YAKCGDLSSSQDLFNGLDNRNIITWNAML 537
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
N + G+ D F + L A + L ++EG Q+HG K G
Sbjct: 538 AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 597
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
D F+ N MY KCG I + +S+ SW+ +I A + + +M
Sbjct: 598 HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 657
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS-ELNVVVKTSLIDMYVKSG 282
G + T VS+L+AC H G + G + ++ R+ E + +ID+ +SG
Sbjct: 658 LEMG-IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSG 716
Query: 283 CIEKGVCVFQNMAEK-SRFSYTVMISGLSIHGH---GAEALQVFSEILEEGLAPDDVVYV 338
+ + M K + + +++ IHG+ G +A + S++ E DD VYV
Sbjct: 717 RLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE----DDSVYV 772
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 148/368 (40%), Gaps = 4/368 (1%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
+Q+ V+K G ++L++ L G+++YA IF Q+ E + +N++
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISM--LGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
+ ++ LL + K G IHG V K G +
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
V N L+ MY G A VF++M K + SW++++ + L LL M G
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
T S L+AC GR +HG+++ + N ++ +L+ MY K G + +
Sbjct: 358 K-SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
V M + ++ +I G + +AL F + EG++ + + V VLSAC
Sbjct: 417 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 476
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
G + E + + ++ + + G L + L + + N + W +
Sbjct: 477 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNA 535
Query: 408 LLSACKVH 415
+L+A H
Sbjct: 536 MLAANAHH 543
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 361 bits (926), Expect = e-99, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 325/578 (56%), Gaps = 22/578 (3%)
Query: 37 LLKRCKSME---EFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
+LK C S+ +Q+H HV K G + F + L++ K G + A +F E
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISM--YCKCGLVADARKVFE--EN 114
Query: 94 PGSFE----YNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE 149
P S + YN +I G + G+ D+ L+ C++ +
Sbjct: 115 PQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWL 174
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHAC 209
G +HG K G+ ++ V N I+MY KCG+++ +F++M K + +W+A+I ++
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ 234
Query: 210 AEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
+ + L L M G + TLVSVLS+C HLG+ +G + ++ N NV
Sbjct: 235 NGLAYDVLELYEQMKSSGVC-PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVF 293
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
V + I MY + G + K VF M KS S+T MI +HG G L +F ++++ G
Sbjct: 294 VSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG 353
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
+ PD V+V VLSACSH+GL ++GL+ F+ M+ E+K++P +HY C+VDLLGRAG L EA
Sbjct: 354 IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEA 413
Query: 390 YGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARA 449
I+SMP++P+ VW +LL ACK+H N+++ E+A K+ PNN G Y++++N+Y+ +
Sbjct: 414 MEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDS 473
Query: 450 HKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQ- 508
+ RIR M ++ + PG+S VE + +V+ F++ DRS + + ++ M+ ++E
Sbjct: 474 KNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSV 533
Query: 509 LEFEGYKPDTSQVLLDVDEDEK-RERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSD 567
+E G +D D E+ + HS++LAIAF ++++ G+ + + +NLR+C D
Sbjct: 534 MELAGN--------MDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCED 585
Query: 568 CHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
CH + K +SKI +R+ VRD RFH+FKDG CSCKDYW
Sbjct: 586 CHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 143/298 (47%), Gaps = 5/298 (1%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G PD F +PF+LK+C+ L G Q+H HV K G + FV LISMY KCG + A
Sbjct: 48 GSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADA 107
Query: 186 CDVFEKMDEKSVAS--WSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSAC 243
VFE+ + S S ++A+I + + M G + T++ ++ C
Sbjct: 108 RKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG-VSVDSVTMLGLVPLC 166
Query: 244 IHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYT 303
LGR +HG ++ + V V S I MY+K G +E G +F M K ++
Sbjct: 167 TVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWN 226
Query: 304 VMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE 363
+ISG S +G + L+++ ++ G+ PD V VLS+C+H G G + K ++
Sbjct: 227 AVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVE-S 285
Query: 364 HKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIG 421
+ P V + + R G L +A + MP+K + V W +++ +H EIG
Sbjct: 286 NGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIG 342
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 319/565 (56%), Gaps = 7/565 (1%)
Query: 37 LLKRC---KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
LLK+C K + + + VHAH+L+ F D G+ L+ AK GS+E A +F ++ +
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNM--YAKCGSLEEARKVFEKMPQ 123
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+ T+I G G P+ F ++KA + G Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
HG K G ++ V + L+ +Y + G + A VF+ ++ ++ SW+A+I HA
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
+ L L M R+G +R + S+ AC G G+ +H ++++ +L +
Sbjct: 244 EKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
L+DMY KSG I +F +A++ S+ +++ + HG G EA+ F E+ G+ P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 334 DVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
++ ++ VL+ACSH+GL++EG ++ M+ + I P HY +VDLLGRAG L A I
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 394 KSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWN 453
+ MPI+P +W++LL+AC++H N E+G AAE +F L+P++PG +++L N+YA +WN
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 454 DVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEG 513
D AR+R++M + + + P S VE E ++ FV+ D P+ + I ++ +++ G
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Query: 514 YKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTK 573
Y PDTS V++ VD+ E+ L++HS+K+A+AF L++T GS + I +N+R+C DCHT K
Sbjct: 542 YVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIK 601
Query: 574 FISKICEREITVRDRFRFHHFKDGA 598
SK+ REI VRD RFHHFKD +
Sbjct: 602 LASKVVGREIIVRDTNRFHHFKDAS 626
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 3/289 (1%)
Query: 127 IGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHAC 186
I D Y LLK C++ + +G +H H+ ++ DI + N L++MY KCG+++ A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 187 DVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHL 246
VFEKM ++ +W+ +I ++ + L+ M R G + E TL SV+ A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFG-YSPNEFTLSSVIKAAAAE 174
Query: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMI 306
G +HG ++ + NV V ++L+D+Y + G ++ VF + ++ S+ +I
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 307 SGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKI 366
+G + +AL++F +L +G P Y + ACS G + +G M +
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM-IKSGE 293
Query: 367 KPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
K ++D+ ++G + +A + + K + V W SLL+A H
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 189/491 (38%), Positives = 286/491 (58%), Gaps = 11/491 (2%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFK-------AGVGDDIFVQNGLISMYGK 178
GI P+ +L C+ +G + G +IH + K G GD+ V N LI MY K
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK 419
Query: 179 CGAIKHACDVFEKMD--EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG-HWRAEEST 235
C + A +F+ + E+ V +W+ +IG ++ ++ L LL +M E R T
Sbjct: 420 CKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 236 LVSVLSACIHLGSPNLGRCIHGILLRNI-SELNVVVKTSLIDMYVKSGCIEKGVCVFQNM 294
+ L AC L + +G+ IH LRN + + + V LIDMY K G I VF NM
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM 539
Query: 295 AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGL 354
K+ ++T +++G +HG+G EAL +F E+ G D V + VL ACSH+G++++G+
Sbjct: 540 MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM 599
Query: 355 QCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKV 414
+ F M+ + P +HY C+VDLLGRAG L A LI+ MP++P VVW + LS C++
Sbjct: 600 EYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRI 659
Query: 415 HLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFS 474
H +E+GE AAEK+ L N+ G Y +L+N+YA A +W DV RIR M K + + PG S
Sbjct: 660 HGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCS 719
Query: 475 MVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERL 534
VE + F D++ P IY ++ +++ GY P+T L DVD++EK + L
Sbjct: 720 WVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLL 779
Query: 535 KHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHF 594
HS+KLA+A+ ++ T +G+ +RI++NLR+C DCHT ++S+I + +I +RD RFHHF
Sbjct: 780 FEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHF 839
Query: 595 KDGACSCKDYW 605
K+G+CSCK YW
Sbjct: 840 KNGSCSCKGYW 850
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 195/432 (45%), Gaps = 47/432 (10%)
Query: 36 PLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQI--EE 93
P + +CK++ + K +H +L G + S+L++T G + +A S+ R+ +
Sbjct: 33 PFIHKCKTISQVKLIHQKLLSFGILTLNLT-SHLIST--YISVGCLSHAVSLLRRFPPSD 89
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
G + +N++IR PDN+ +PF+ KAC + V+ G
Sbjct: 90 AGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
H G ++FV N L++MY +C ++ A VF++M V SW++II ++A
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
L + M+ E R + TLV+VL C LG+ +LG+ +H + + N+ V
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
L+DMY K G +++ VF NM+ K S+ M++G S G +A+++F ++ EE + D
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 334 DVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
V + +S + GL E L G+ R+ +
Sbjct: 330 VVTWSAAISGYAQRGLGYEAL-----------------------------GVCRQ----M 356
Query: 394 KSMPIKPNDVVWRSLLSACKVHLNL----EIGEIAAEKLFMLNPNNPGDYLVLAN----M 445
S IKPN+V S+LS C L EI A + L N GD ++ N M
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDM 416
Query: 446 YARAHKWNDVAR 457
YA+ K D AR
Sbjct: 417 YAKCKKV-DTAR 427
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/579 (33%), Positives = 310/579 (53%), Gaps = 6/579 (1%)
Query: 30 NEQGWYPLLKRC---KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACS 86
N+ + +LK C +E +Q+H+ ++K F +++ S L+ AK G ++ A
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM--YAKLGKLDTAWD 546
Query: 87 IFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGG 146
I + + TMI G GI D + AC+ L
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 147 VKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGA 206
+KEG QIH +G D+ QN L+++Y +CG I+ + FE+ + +W+A++
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG 666
Query: 207 HACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISEL 266
+ + L + M+REG T S + A + G+ +H ++ + +
Sbjct: 667 FQQSGNNEEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 725
Query: 267 NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEIL 326
V +LI MY K G I F ++ K+ S+ +I+ S HG G+EAL F +++
Sbjct: 726 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785
Query: 327 EEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGML 386
+ P+ V VGVLSACSH GLV++G+ F++M E+ + P +HY C+VD+L RAG+L
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845
Query: 387 REAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMY 446
A I+ MPIKP+ +VWR+LLSAC VH N+EIGE AA L L P + Y++L+N+Y
Sbjct: 846 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 447 ARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQME 506
A + KW+ R++M +K + + PG S +E + ++ F D++ P D I+ +
Sbjct: 906 AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLT 965
Query: 507 WQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCS 566
+ GY D +L ++ ++K + HS+KLAI+F L+ P+ + +NLR+C+
Sbjct: 966 KRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCN 1025
Query: 567 DCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
DCH + KF+SK+ REI VRD +RFHHF+ GACSCKDYW
Sbjct: 1026 DCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 171/379 (45%), Gaps = 17/379 (4%)
Query: 39 KRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFE 98
K+ +S+E +Q+H VLKLGF D++ + LV+ G++ A IF + + +
Sbjct: 299 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL--YFHLGNLISAEHIFSNMSQRDAVT 356
Query: 99 YNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVF 158
YNT+I G G+ PD+ L+ ACS G + G Q+H +
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 159 KAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLM 218
K G + ++ L+++Y KC I+ A D F + + ++V W+ ++ A+ +
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 219 LLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMY 278
+ M E + T S+L CI LG LG IH +++ +LN V + LIDMY
Sbjct: 477 IFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 279 VKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYV 338
K G ++ + A K S+T MI+G + + +AL F ++L+ G+ D+V
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595
Query: 339 GVLSACSHAGLVNEGLQCFKNMQFEHK------IKPTVQHYGCMVDLLGRAGMLREAYGL 392
+SAC+ GLQ K Q H + +V L R G + E+Y
Sbjct: 596 NAVSACA-------GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 393 IKSMPIKPNDVVWRSLLSA 411
+ N + W +L+S
Sbjct: 649 FEQTEAGDN-IAWNALVSG 666
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 202/468 (43%), Gaps = 42/468 (8%)
Query: 38 LKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSF 97
LK S++E +++H+ +LKLG + C S + L K G + A +F ++ E F
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNG-CLSEKLFDFYLFK-GDLYGAFKVFDEMPERTIF 152
Query: 98 EYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKAC---SLLGGVKEGIQIH 154
+N MI+ S + P+ + +L+AC S+ V E QIH
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE--QIH 210
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
+ G+ D V N LI +Y + G + A VF+ + K +SW A+I + E
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
+ + L DM G SVLSAC + S +G +HG++L+ + V +L
Sbjct: 271 EAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
+ +Y G + +F NM+++ +Y +I+GLS G+G +A+++F + +GL PD
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 335 VVYVGVLSACSHAGLVNEGLQCFK---------------------------NMQFEHKIK 367
++ ACS G + G Q ++ ++
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 368 PTVQH---YGCMVDLLGRAGMLREAYGLIKSMPIK---PNDVVWRSLLSACKVHLNLEIG 421
V++ + M+ G LR ++ + + M I+ PN + S+L C +LE+G
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 422 EIAAEKLFMLNPN-NPGDYLVLANMYARAHKWNDVARIRREMADKHLV 468
E ++ N N VL +MYA+ K + I A K +V
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 159/371 (42%), Gaps = 11/371 (2%)
Query: 48 KQVHAHVLKLGFFCDSFCGS---NLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIR 104
+Q+HA+ KLGF ++ NL A CA +E A F + E +N M+
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCA-----DIETALDYFLETEVENVVLWNVMLV 463
Query: 105 GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGD 164
+ + I P+ + YP +LK C LG ++ G QIH + K
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
+ +V + LI MY K G + A D+ + K V SW+ +I + + L M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
G R++E L + +SAC L + G+ IH + ++ + +L+ +Y + G I
Sbjct: 584 DRG-IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 285 EKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC 344
E+ F+ ++ ++SG G+ EAL+VF + EG+ ++ + + A
Sbjct: 643 EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 345 SHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV 404
S + +G Q + + + ++ + + G + +A + K N+V
Sbjct: 703 SETANMKQGKQVHAVIT-KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVS 760
Query: 405 WRSLLSACKVH 415
W ++++A H
Sbjct: 761 WNAIINAYSKH 771
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 207/549 (37%), Positives = 306/549 (55%), Gaps = 25/549 (4%)
Query: 81 MEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDN--------- 131
M A +F +I EP +F YN M+ V +N N
Sbjct: 109 MMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 132 --------FIYPFLLKA----CSLLGGVKE--GIQIHGHVFKAGVGDDIFVQNGLISMYG 177
Y + K +++ G E ++ H FK + +I+ Y
Sbjct: 169 GEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYM 228
Query: 178 KCGAIKHACDVFEKMD-EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTL 236
K ++ A +F+ M K++ +W+A+I + L L M EG R S L
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG-IRPNSSGL 287
Query: 237 VSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE 296
S L C L + LGR IH I+ ++ +V TSLI MY K G + +F+ M +
Sbjct: 288 SSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 297 KSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
K ++ MISG + HG+ +AL +F E+++ + PD + +V VL AC+HAGLVN G+
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 407
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHL 416
F++M ++K++P HY CMVDLLGRAG L EA LI+SMP +P+ V+ +LL AC+VH
Sbjct: 408 FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHK 467
Query: 417 NLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMV 476
N+E+ E AAEKL LN N Y+ LAN+YA ++W DVAR+R+ M + ++V+ PG+S +
Sbjct: 468 NVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Query: 477 EAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKH 536
E KV+ F S DR PE D+I+ + ++E +++ GYKP+ L +V+E++K + L
Sbjct: 528 EIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLW 587
Query: 537 HSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKD 596
HS+KLA+AF I +GS +++ +NLR+C DCH KFIS+I +REI VRD RFHHFKD
Sbjct: 588 HSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKD 647
Query: 597 GACSCKDYW 605
G+CSC DYW
Sbjct: 648 GSCSCGDYW 656
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/547 (35%), Positives = 313/547 (57%), Gaps = 9/547 (1%)
Query: 63 SFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXX 122
++ SN++ + G + A +F ++ + +N MI G +
Sbjct: 24 NYMSSNILIN-GYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM 82
Query: 123 XXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAI 182
G PD + + + L V G QIHG+ K G+ D+ V + L MY + G +
Sbjct: 83 HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 142
Query: 183 KHACDVFEKMDEKSVASWSAIIGAHA---CAEMWHQCLMLLGDMSREGHWRAEESTLVSV 239
+ V M +++ +W+ +I +A C E ++ L M + R + T V+V
Sbjct: 143 QDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPE----TVLYLYKMMKISGCRPNKITFVTV 198
Query: 240 LSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR 299
LS+C L G+ IH ++ + V V +SLI MY K GC+ F ++
Sbjct: 199 LSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE 258
Query: 300 FSYTVMISGLSIHGHGAEALQVFSEILEE-GLAPDDVVYVGVLSACSHAGLVNEGLQCFK 358
++ MIS HG G EA+++F+ + E+ + ++V ++ +L ACSH+GL ++GL+ F
Sbjct: 259 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFD 318
Query: 359 NMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNL 418
M ++ KP ++HY C+VDLLGRAG L +A +I+SMPIK + V+W++LLSAC +H N
Sbjct: 319 MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNA 378
Query: 419 EIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEA 478
E+ + +++ ++PN+ Y++LAN++A A +W DV+ +R+ M DK++ + G S E
Sbjct: 379 EMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEH 438
Query: 479 ERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHS 538
+ +V++F DRSQ + IY+ + ++ +++ +GYKPDT+ VL D+DE+EK L HS
Sbjct: 439 KGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHS 498
Query: 539 QKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGA 598
+KLA+AF L+ EG+P+RI +NLR+CSDCH K+IS I REIT+RD RFHHF +G
Sbjct: 499 EKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGK 558
Query: 599 CSCKDYW 605
CSC DYW
Sbjct: 559 CSCGDYW 565
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/540 (36%), Positives = 303/540 (56%), Gaps = 36/540 (6%)
Query: 99 YNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVF 158
YN MI G V+ GI D F YP +++AC+ G ++ G Q+H +V
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 159 KAGVGDDIF-VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACA------- 210
+ D F N L+S+Y KCG A +FEKM K + SW+A++ + +
Sbjct: 314 RRE--DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 211 ----EM-------W-------------HQCLMLLGDMSREGHWRAEESTLVSVLSACIHL 246
EM W + L L M REG + + + +C L
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG-FEPCDYAFSGAIKSCAVL 430
Query: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMI 306
G+ G+ H LL+ + ++ +LI MY K G +E+ VF+ M S+ +I
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALI 490
Query: 307 SGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKI 366
+ L HGHGAEA+ V+ E+L++G+ PD + + VL+ACSHAGLV++G + F +M+ ++I
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRI 550
Query: 367 KPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAE 426
P HY ++DLL R+G +A +I+S+P KP +W +LLS C+VH N+E+G IAA+
Sbjct: 551 PPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAAD 610
Query: 427 KLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFV 486
KLF L P + G Y++L+NM+A +W +VAR+R+ M D+ + + S +E E +V+ F+
Sbjct: 611 KLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFL 670
Query: 487 SQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDED-EKRERLKHHSQKLAIAF 545
D S PE + +Y + + ++ GY PDTS VL DV+ D K + L HS+K+A+AF
Sbjct: 671 VDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAF 730
Query: 546 TLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
L+ G+ +RI +NLR C DCH + +F+S + +R+I +RDR RFHHF++G CSC ++W
Sbjct: 731 GLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 156/406 (38%), Gaps = 55/406 (13%)
Query: 15 LPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCA 74
+ P ++ R+ L R S++ + VH +++ GF + + L+
Sbjct: 1 MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDV-- 58
Query: 75 LAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIY 134
K + YA +F +I EP TM+ G + +
Sbjct: 59 YCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD----------------------- 95
Query: 135 PFLLKACSLLGGVKEGIQIHGHVFKAGV-GDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
+L GV E KA V D + N +I+ + A ++F KM
Sbjct: 96 ------ITLARGVFE---------KAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK 140
Query: 194 EK-----SVASWSAIIGAHACAEMWHQCLMLLGDM--SREGHWRAEESTLVSVLSACIHL 246
+ + S + G A+ QC+ S G+ + + LVSV S C
Sbjct: 141 HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA-- 198
Query: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRF-SYTVM 305
SP+L + I E + T+++ YVK+G + G + + M + + +Y M
Sbjct: 199 SSPSLLHSARKVF-DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
ISG G EAL++ ++ G+ D+ Y V+ AC+ AGL+ G Q +
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED 317
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+ +V L + G EA + + MP K + V W +LLS
Sbjct: 318 F--SFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/437 (41%), Positives = 268/437 (61%), Gaps = 2/437 (0%)
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
N +I +G+ G I A VF+ M+++ A+W +I A+ + L L M ++G
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV- 327
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
R +L+S+LS C L S GR +H L+R + +V V + L+ MYVK G + K
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGL 349
VF + K + +ISG + HG G EAL++F E+ G P+ V + +L+ACS+AG
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 350 VNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
+ EGL+ F++M+ + + PTV+HY C VD+LGRAG + +A LI+SM IKP+ VW +LL
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Query: 410 SACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQ 469
ACK H L++ E+AA+KLF P+N G Y++L+++ A KW DVA +R+ M ++ +
Sbjct: 508 GACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSK 567
Query: 470 TPGFSMVEAERKVYKFVSQD-RSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDED 528
PG S +E +KV+ F ++ PE I M+ + + L GY PD S VL DVDE+
Sbjct: 568 FPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEE 627
Query: 529 EKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDR 588
EK + L HS++LA+A+ L+ EG P+R+ +NLR+C DCH K ISK+ EREI +RD
Sbjct: 628 EKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDA 687
Query: 589 FRFHHFKDGACSCKDYW 605
RFHHF +G CSC+DYW
Sbjct: 688 NRFHHFNNGECSCRDYW 704
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 11/264 (4%)
Query: 35 YPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEP 94
Y L R + EEF +V +K C++ + G + A +F +E+
Sbjct: 244 YTLSGRIEDAEEFFEVMP--MKPVIACNAMI-------VGFGEVGEISKARRVFDLMEDR 294
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIH 154
+ + MI+ G+ P +L C+ L ++ G Q+H
Sbjct: 295 DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVH 354
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
H+ + DD++V + L++MY KCG + A VF++ K + W++II +A +
Sbjct: 355 AHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGE 414
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS- 273
+ L + +M G + TL+++L+AC + G G I + V S
Sbjct: 415 EALKIFHEMPSSGT-MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEK 297
+DM ++G ++K + + ++M K
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIK 497
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 25/245 (10%)
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
NGL+S Y K I A +VFE M E++V SW+A++ + M + L W
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF--------W 134
Query: 230 RAEESTLVS---VLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEK 286
R E VS + I G + R ++ ++ +VV T++I + G +++
Sbjct: 135 RMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDE 190
Query: 287 GVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSH 346
+F M E++ ++T MI+G + A ++F E++ E +V + +L +
Sbjct: 191 ARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF-EVMPE---KTEVSWTSMLLGYTL 246
Query: 347 AGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWR 406
+G + + + F+ M +KP + M+ G G + +A + M + N WR
Sbjct: 247 SGRIEDAEEFFEVM----PMKPVIA-CNAMIVGFGEVGEISKARRVFDLMEDRDN-ATWR 300
Query: 407 SLLSA 411
++ A
Sbjct: 301 GMIKA 305
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 37/271 (13%)
Query: 173 ISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAE 232
IS + G I A F+ + K++ SW++I+ + + + L +MS
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS-------- 75
Query: 233 ESTLVS---VLSACIHLGSPNLGRCIHGILLRNISEL----NVVVKTSLIDMYVKSGCIE 285
E +VS ++S I R I + RN+ EL NVV T+++ Y++ G +
Sbjct: 76 ERNVVSWNGLVSGYIK------NRMI--VEARNVFELMPERNVVSWTAMVKGYMQEGMVG 127
Query: 286 KGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS 345
+ +F M E++ S+TVM GL G +A +++ + D V ++
Sbjct: 128 EAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM----PVKDVVASTNMIGGLC 183
Query: 346 HAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVW 405
G V+E F M+ + V + M+ + + A L + MP K +V W
Sbjct: 184 REGRVDEARLIFDEMR-----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK-TEVSW 237
Query: 406 RSLLSACKVHLNLEIGEIAAEKLFMLNPNNP 436
S+L + +E AE+ F + P P
Sbjct: 238 TSMLLGYTLSGRIE----DAEEFFEVMPMKP 264
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 325/603 (53%), Gaps = 36/603 (5%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
L R +++ K +HAH++KLG + LV K G+ +A +F ++
Sbjct: 12 LCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNV--YGKCGAASHALQVFDEMPHRDH 69
Query: 97 FEYNTMIRG-NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
+ +++ N + ++ G+ PD+F++ L+KAC+ LG + G Q+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
H + +D V++ L+ MY KCG + A VF+ + K+ SW+A++ +A + +
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 216 CLMLL-------------------------------GDMSREGHWRAEESTLVSVLSACI 244
L L +M RE + L S++ AC
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 245 HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
+L + GR +HG+++ + V + +LIDMY K + +F M + S+T
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
+I G++ HG +AL ++ +++ G+ P++V +VG++ ACSH G V +G + F++M ++
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 365 KIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIG-EI 423
I+P++QHY C++DLLGR+G+L EA LI +MP P++ W +LLSACK ++G I
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 424 AAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVY 483
A + +P Y++L+N+YA A W V+ RR++ + + + PG S VE ++
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489
Query: 484 KFVSQDRSQPEFDTIYNMIHQMEWQLEFE-GYKPDTSQVLLDVDEDEKRERLKHHSQKLA 542
F + + S P + I+ ++ ++E ++ GY PDTS +L D+DE EK + L HS++ A
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSA 549
Query: 543 IAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCK 602
+A+ L+ G+P+RI +NLR+C DCH K IS+I EREI VRD R+HHFK G CSC
Sbjct: 550 VAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609
Query: 603 DYW 605
D+W
Sbjct: 610 DFW 612
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 4/230 (1%)
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
Y L+ C+ + +H H+ K G+ + N L+++YGKCGA HA VF++M
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
+ +W++++ A A + + L + + R ++ +++ AC +LGS + GR
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 254 CIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHG 313
+H + + + VVK+SL+DMY K G + VF ++ K+ S+T M+SG + G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 314 HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE 363
EAL++F + + L + ++S +G E F M+ E
Sbjct: 186 RKEEALELFRILPVKNLYS----WTALISGFVQSGKGLEAFSVFTEMRRE 231
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 355 bits (911), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 200/572 (34%), Positives = 301/572 (52%), Gaps = 40/572 (6%)
Query: 73 CALAKWGSMEYACSIFRQIEEPGS----FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIG 128
CA A+ G +E I ++E G +N ++ G G
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC 249
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCG-------- 180
PD +L + + G IHG+V K G+ D V + +I MYGK G
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 181 -----------------------AIKHACDVFEKMDEKS----VASWSAIIGAHACAEMW 213
+ A ++FE E++ V SW++II A
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
+ L L +M G + T+ S+L AC ++ + GR HG +R NV V ++
Sbjct: 370 IEALELFREMQVAG-VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
LIDMY K G I VF M K+ + +++G S+HG E + +F ++ L PD
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 334 DVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
+ + +LSAC GL +EG + FK M E+ IKP ++HY CMV+LLGRAG L+EAY LI
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 394 KSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWN 453
K MP +P+ VW +LL++C++ N+++ EIAAEKLF L P NPG Y++L+N+YA W
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 454 DVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEG 513
+V IR +M L + PG S ++ + +VY ++ D+S P+ D I + ++ ++ G
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Query: 514 YKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTK 573
++P+ L DV+E E+ + L HS+KLA+ F L++T +G+P+++ +NLR+C DCH K
Sbjct: 669 HRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIK 728
Query: 574 FISKICEREITVRDRFRFHHFKDGACSCKDYW 605
FIS REI +RD RFHHFKDG CSC D+W
Sbjct: 729 FISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 126/535 (23%), Positives = 223/535 (41%), Gaps = 86/535 (16%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
Q HA +LK G D + + L+A+ + + A + + I +P + ++++I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIAS--YSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
G+ PD+ + P L K C+ L K G QIH +G+ D FV
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG- 227
Q + MY +CG + A VF++M +K V + SA++ A+A + + +L +M G
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 228 -----HWRA----------------------------EESTLVSVLSACIHLGSPNLGRC 254
W ++ T+ SVL + N+GR
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 255 IHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGH 314
IHG +++ + V +++IDMY KSG + + +F I+GLS +G
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 315 GAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
+AL++F E+ + + V + +++ C+ G E L+ F+ MQ
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV------------ 381
Query: 375 CMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIA---AEKLFML 431
AG +KPN V S+L AC L G A ++ +L
Sbjct: 382 --------AG-------------VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL 420
Query: 432 NPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLV----QTPGFSMVEAERKV---YK 484
+ + G L+ +MYA+ + N + M K+LV GFSM ++V ++
Sbjct: 421 DNVHVGSALI--DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE 478
Query: 485 FVSQDRSQPEFDTIYNMIHQM-EWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHS 538
+ + R +P+F + +++ + L EG+K + +E + RL+H+S
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVGLTDEGWK----YFKMMSEEYGIKPRLEHYS 529
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 355 bits (910), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 182/461 (39%), Positives = 278/461 (60%), Gaps = 6/461 (1%)
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK-SVASWSAIIGAHA 208
G QIHG K + D+ +N LI+ YGKCG + +F +M E+ +W+++I +
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 209 CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNV 268
E+ + L L+ M + G R + +VLSA + + G +H +R E +V
Sbjct: 596 HNELLAKALDLVWFMLQTGQ-RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
VV ++L+DMY K G ++ + F M ++ +S+ MISG + HG G EAL++F + +
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 329 GLAPDD-VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLR 387
G P D V +VGVLSACSHAGL+ EG + F++M + + P ++H+ CM D+LGRAG L
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774
Query: 388 EAYGLIKSMPIKPNDVVWRSLLSAC--KVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANM 445
+ I+ MP+KPN ++WR++L AC E+G+ AAE LF L P N +Y++L NM
Sbjct: 775 KLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 834
Query: 446 YARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQM 505
YA +W D+ + R++M D + + G+S V + V+ FV+ D+S P+ D IY + ++
Sbjct: 835 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKEL 894
Query: 506 EWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTL-IHTSEGSPMRISRNLRL 564
++ GY P T L D++++ K E L +HS+KLA+AF L S P+RI +NLR+
Sbjct: 895 NRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRV 954
Query: 565 CSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
C DCH+ K+ISKI R+I +RD RFHHF+DGACSC D+W
Sbjct: 955 CGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 177/407 (43%), Gaps = 13/407 (3%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+++ ++VH HV+ G D G AK GS+ A +F + + S +N+MI
Sbjct: 329 LKKGREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
G I P +F L +C+ L K G QIHG K G+
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEM-WHQCLMLLGD 222
++ V N L+++Y + G + +F M E SW++IIGA A +E + ++ +
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 223 MSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSG 282
R G + T SVLSA L LG+ IHG+ L+N + +LI Y K G
Sbjct: 508 AQRAGQ-KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCG 566
Query: 283 CIEKGVCVFQNMAE-KSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVL 341
++ +F MAE + ++ MISG + A+AL + +L+ G D +Y VL
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 626
Query: 342 SACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPN 401
SA + + G++ ++ V +VD+ + G L A +MP++ N
Sbjct: 627 SAFASVATLERGMEVHA-CSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-N 684
Query: 402 DVVWRSLLSACKVHLNLEIGEIAAEKLF---MLNPNNPGDYLVLANM 445
W S++S H E A KLF L+ P D++ +
Sbjct: 685 SYSWNSMISGYARHGQGE----EALKLFETMKLDGQTPPDHVTFVGV 727
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 168/395 (42%), Gaps = 18/395 (4%)
Query: 30 NEQGWYPLLKRCKSMEEF-----KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYA 84
N+ + +L+ C+ + +Q+H + KL + D+ SN++ + GS+ YA
Sbjct: 101 NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV-SNVLISMYWKCIGSVGYA 159
Query: 85 CSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLK-ACSL 143
F IE S +N++I + G P + + L+ ACSL
Sbjct: 160 LCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSL 219
Query: 144 L-GGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSA 202
V+ QI + K+G+ D+FV +GL+S + K G++ +A VF +M+ ++ + +
Sbjct: 220 TEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNG 279
Query: 203 IIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLG-----SPNLGRCIHG 257
++ + + L DM+ E + V +LS+ GR +HG
Sbjct: 280 LMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHG 337
Query: 258 -ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
++ + + V + L++MY K G I VF M +K S+ MI+GL +G
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI 397
Query: 317 EALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCM 376
EA++ + + + P + LS+C+ G Q + I V +
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ-IHGESLKLGIDLNVSVSNAL 456
Query: 377 VDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+ L G L E + SMP + + V W S++ A
Sbjct: 457 MTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 155/333 (46%), Gaps = 28/333 (8%)
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEM 212
H ++K + D+++ N LI+ Y + G A VF++M ++ SW+ I+ ++
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL--GRCIHGILLRNISELNVVV 270
+ L+ L DM +EG + + + VSVL AC +GS + GR IHG++ + ++ VV
Sbjct: 83 HKEALVFLRDMVKEGIF-SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 271 KTSLIDMYVKS-GCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
LI MY K G + +C F ++ K+ S+ +IS S G A ++FS + +G
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 330 LAPDDVVYVG-VLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
P + + V +ACS + E +++ +I T+Q G + DL +G++
Sbjct: 202 SRPTEYTFGSLVTTACS----LTE-----PDVRLLEQIMCTIQKSGLLTDLFVGSGLVS- 251
Query: 389 AYGLIKSMPIKPNDVVWRSLLSACKVHLN-LEIGEI------AAEKLFM----LNPNNPG 437
KS + V+ + + V LN L +G + A KLFM + +P
Sbjct: 252 --AFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE 309
Query: 438 DYLVLANMYARAHKWNDVARIRREMADKHLVQT 470
Y++L + + +V + H++ T
Sbjct: 310 SYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 237 VSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE 296
+S + +C+ G R H L +N + +V + +LI+ Y+++G VF M
Sbjct: 7 LSFVQSCV--GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 297 KSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLV 350
++ S+ ++SG S +G EAL ++++EG+ + +V VL AC G V
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/583 (33%), Positives = 309/583 (53%), Gaps = 3/583 (0%)
Query: 23 SELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSME 82
+E S R L R ++ E K H ++++ D + L+ A +K G +E
Sbjct: 56 NEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLIN--AYSKCGFVE 113
Query: 83 YACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACS 142
A +F + E +NTMI G F +L AC
Sbjct: 114 LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG 173
Query: 143 LLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSA 202
+ E ++H K + +++V L+ +Y KCG IK A VFE M +KS +WS+
Sbjct: 174 VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 203 IIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN 262
++ + + + + L+L R + TL SV+ AC +L + G+ +H ++ ++
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMS-LEQNQFTLSSVICACSNLAALIEGKQMHAVICKS 292
Query: 263 ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVF 322
NV V +S +DMY K G + + +F + EK+ + +ISG + H E + +F
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILF 352
Query: 323 SEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGR 382
++ ++G+ P++V + +LS C H GLV EG + FK M+ + + P V HY CMVD+LGR
Sbjct: 353 EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 412
Query: 383 AGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVL 442
AG+L EAY LIKS+P P +W SLL++C+V+ NLE+ E+AAEKLF L P N G++++L
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLL 472
Query: 443 ANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMI 502
+N+YA +W ++A+ R+ + D + + G S ++ + KV+ F + P I + +
Sbjct: 473 SNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 532
Query: 503 HQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNL 562
+ + GYKP L DV+ +K E L HS+KLA+ F L+ E SP+RI +NL
Sbjct: 533 DNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNL 592
Query: 563 RLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
R+C DCH + K S R I VRD RFHHF DG CSC D+W
Sbjct: 593 RICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 215/626 (34%), Positives = 330/626 (52%), Gaps = 24/626 (3%)
Query: 1 MTRTTVLSQTHLLS---LPSTPPQCSELSTRFNEQGWYPL-------LKRC---KSMEEF 47
M V+S + L+S L L + QG YP LK C ++E+
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
Q+H LK+GF G++LV +K G + A +FR+I + +N MI G V
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDM--YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 108 SIMNXXXXXXXXXXXXXXGIG--PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGV--G 163
I PD F LLKACS G + G QIHG + ++G
Sbjct: 185 HAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
+ L+ +Y KCG + A F+++ EK++ SWS++I +A + + + L +
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC 283
+E + + + L S++ G+ + + ++ S L V S++DMY+K G
Sbjct: 305 -QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+++ F M K S+TV+I+G HG G +++++F E+L + PD+V Y+ VLSA
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV 403
CSH+G++ EG + F + H IKP V+HY C+VDLLGRAG L+EA LI +MPIKPN
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483
Query: 404 VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMA 463
+W++LLS C+VH ++E+G+ + L ++ NP +Y++++N+Y +A WN+ R
Sbjct: 484 IWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGN 543
Query: 464 DKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFE-GYKPDTSQVL 522
K L + G S VE ER+V+ F S + S P I + + E +L E GY L
Sbjct: 544 IKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHEL 603
Query: 523 LDVDEDEKRERLKHHSQKLAIAFTLIH---TSEGSPMRISRNLRLCSDCHTYTKFISKIC 579
D+D++ K E L+ HS+KLAI L +G +R+ +NLR+C DCH + K +SKI
Sbjct: 604 HDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKIT 663
Query: 580 EREITVRDRFRFHHFKDGACSCKDYW 605
+ VRD RFH F+DG CSC DYW
Sbjct: 664 KIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 138/281 (49%), Gaps = 15/281 (5%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
+L+ C+ G +G Q+H ++ K+G G ++ N LI MY KC A VF+ M E++
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
V SWSA++ H L L +M R+G + E T + L AC L + G IH
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY-PNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
G L+ E+ V V SL+DMY K G I + VF+ + ++S S+ MI+G G+G+
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 317 EALQVFSEILEEGLA--PDDVVYVGVLSACSHAGLVNEGLQC---FKNMQFEHKIKPTVQ 371
+AL F + E + PD+ +L ACS G++ G Q F T+
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 372 HYGCMVDLLGRAGML---REAYGLIKSMPIKPNDVVWRSLL 409
G +VDL + G L R+A+ IK + + W SL+
Sbjct: 251 --GSLVDLYVKCGYLFSARKAFDQIKEKTM----ISWSSLI 285
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 10/184 (5%)
Query: 232 EESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVF 291
+ LVS+L C G + G +H LL++ S LN++ LIDMY K VF
Sbjct: 5 QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 292 QNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVN 351
+M E++ S++ ++SG ++G +L +FSE+ +G+ P++ + L AC +
Sbjct: 65 DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 352 EGLQ----CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
+GLQ C K + FE V+ +VD+ + G + EA + + + + + + W +
Sbjct: 125 KGLQIHGFCLK-IGFEM----MVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNA 178
Query: 408 LLSA 411
+++
Sbjct: 179 MIAG 182
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/571 (34%), Positives = 310/571 (54%), Gaps = 9/571 (1%)
Query: 40 RCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEY 99
R KS+ K+V+ ++ GF + + + ++ K G + A +F +I E + Y
Sbjct: 135 RLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLM--HVKCGMIIDARRLFDEIPERNLYSY 192
Query: 100 NTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFK 159
++I G V+ N + + +L+A + LG + G Q+H K
Sbjct: 193 YSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK 252
Query: 160 AGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLML 219
GV D+ FV GLI MY KCG I+ A FE M EK+ +W+ +I +A + L L
Sbjct: 253 LGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCL 312
Query: 220 LGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYV 279
L DM R+ ++ TL ++ L L + H L+RN E +V T+L+D Y
Sbjct: 313 LYDM-RDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYS 371
Query: 280 KSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVG 339
K G ++ VF + K+ S+ ++ G + HG G +A+++F +++ +AP+ V ++
Sbjct: 372 KWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLA 431
Query: 340 VLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK 399
VLSAC+++GL +G + F +M H IKP HY CM++LLGR G+L EA I+ P+K
Sbjct: 432 VLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLK 491
Query: 400 PNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIR 459
+W +LL+AC++ NLE+G + AEKL+ + P G+Y+V+ NMY K + A +
Sbjct: 492 TTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVL 551
Query: 460 REMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQ-----MEWQLEFEGY 514
+ K L P + VE + + F+S DR +T+ I+Q ME E+ GY
Sbjct: 552 ETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEY-GY 610
Query: 515 KPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKF 574
+ +L DVDE E+ ++HS+KLAIA+ L++T E +P++I++N R+C +CH +F
Sbjct: 611 SEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEF 670
Query: 575 ISKICEREITVRDRFRFHHFKDGACSCKDYW 605
IS + RE+ VRD RFHHFK+G CSC YW
Sbjct: 671 ISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 25/293 (8%)
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
Y L++AC L ++ +++G + G + ++ N ++ M+ KCG I A +F+++
Sbjct: 126 YDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIP 185
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
E+++ S+ +II + + L M E E T +L A LGS +G+
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELS-DCETHTFAVMLRASAGLGSIYVGK 244
Query: 254 CIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHG 313
+H L+ N V LIDMY K G IE C F+ M EK+ ++ +I+G ++HG
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 314 HGAEALQVFSEILEEGLAPDDVVYVGV-----------LSACSHAGLVNEGLQCFKNMQF 362
+ EAL + ++ + G++ D + L+ +HA L+ G F
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNG--------F 356
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
E +I +VD + G + A + +P + N + W +L+ H
Sbjct: 357 ESEIVANT----ALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANH 404
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 234 STLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQN 293
ST +++ ACI L S + ++G ++ N E + ++ M+VK G I +F
Sbjct: 124 STYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDE 183
Query: 294 MAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEG 353
+ E++ +SY +ISG G+ EA ++F + EE + + +L A + G + G
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 354 LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACK 413
Q + T G ++D+ + G + +A + MP K V W ++++
Sbjct: 244 KQLHVCALKLGVVDNTFVSCG-LIDMYSKCGDIEDARCAFECMPEKTT-VAWNNVIAGYA 301
Query: 414 VH 415
+H
Sbjct: 302 LH 303
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/554 (34%), Positives = 307/554 (55%), Gaps = 4/554 (0%)
Query: 45 EEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIR 104
E+ + +H V+ G F + G+ LV+ K G M + + Q+ +N +I
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSM--YGKIGEMSESRRVLLQMPRRDVVAWNALIG 419
Query: 105 GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE-GIQIHGHVFKAGVG 163
G + G+ + +L AC L G + E G +H ++ AG
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 479
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
D V+N LI+MY KCG + + D+F +D +++ +W+A++ A+A + L L+ M
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC 283
G ++ + LSA L G+ +HG+ ++ E + + + DMY K G
Sbjct: 540 RSFG-VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 598
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
I + V + +S S+ ++IS L HG+ E F E+LE G+ P V +V +L+A
Sbjct: 599 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 658
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV 403
CSH GLV++GL + + + ++P ++H C++DLLGR+G L EA I MP+KPND+
Sbjct: 659 CSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL 718
Query: 404 VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMA 463
VWRSLL++CK+H NL+ G AAE L L P + Y++ +NM+A +W DV +R++M
Sbjct: 719 VWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMG 778
Query: 464 DKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLL 523
K++ + S V+ + KV F DR+ P+ IY + ++ ++ GY DTSQ L
Sbjct: 779 FKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQ 838
Query: 524 DVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREI 583
D DE++K L +HS++LA+A+ L+ T EGS +RI +NLR+CSDCH+ KF+S++ R I
Sbjct: 839 DTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRI 898
Query: 584 TVRDRFRFHHFKDG 597
+RD++RFHHF+ G
Sbjct: 899 VLRDQYRFHHFERG 912
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 164/378 (43%), Gaps = 16/378 (4%)
Query: 40 RCKSM-EEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFE 98
R SM E QVH V K G D + + ++ + +G + + +F ++ +
Sbjct: 53 RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV--YGLVSCSRKVFEEMPDRNVVS 110
Query: 99 YNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVF 158
+ +++ G G+G + ++ +C LL G QI G V
Sbjct: 111 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 170
Query: 159 KAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLM 218
K+G+ + V+N LISM G G + +A +F++M E+ SW++I A+A +
Sbjct: 171 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 219 LLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMY 278
+ M R H +T+ ++LS H+ GR IHG++++ + V V +L+ MY
Sbjct: 231 IFSLM-RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 289
Query: 279 VKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYV 338
+G + VF+ M K S+ +++ G +AL + ++ G + + V +
Sbjct: 290 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 349
Query: 339 GVLSAC-----SHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
L+AC G + GL + + I +V + G+ G + E+ ++
Sbjct: 350 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG------NALVSMYGKIGEMSESRRVL 403
Query: 394 KSMPIKPNDVVWRSLLSA 411
MP + + V W +L+
Sbjct: 404 LQMP-RRDVVAWNALIGG 420
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 150/314 (47%), Gaps = 4/314 (1%)
Query: 99 YNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGV-KEGIQIHGHV 157
+NTM+ G V + GI P +F+ L+ AC G + +EG+Q+HG V
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 158 FKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCL 217
K+G+ D++V ++ +YG G + + VFE+M +++V SW++++ ++ + +
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128
Query: 218 MLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDM 277
+ M EG E+++ V+S+C L +LGR I G ++++ E + V+ SLI M
Sbjct: 129 DIYKGMRGEG-VGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 187
Query: 278 YVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
G ++ +F M+E+ S+ + + + +GH E+ ++FS + +
Sbjct: 188 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 247
Query: 338 VGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP 397
+LS H G + + + V ++ + AG EA + K MP
Sbjct: 248 STLLSVLGHVDHQKWG-RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 398 IKPNDVVWRSLLSA 411
K + + W SL+++
Sbjct: 307 TK-DLISWNSLMAS 319
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 12/300 (4%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+E K +HA+++ GF D ++L+ AK G + + +F ++ +N M+
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITM--YAKCGDLSSSQDLFNGLDNRNIITWNAML 520
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
N + G+ D F + L A + L ++EG Q+HG K G
Sbjct: 521 AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 580
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
D F+ N MY KCG I + +S+ SW+ +I A + + +M
Sbjct: 581 HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 640
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS-ELNVVVKTSLIDMYVKSG 282
G + T VS+L+AC H G + G + ++ R+ E + +ID+ +SG
Sbjct: 641 LEMG-IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSG 699
Query: 283 CIEKGVCVFQNMAEK-SRFSYTVMISGLSIHGH---GAEALQVFSEILEEGLAPDDVVYV 338
+ + M K + + +++ IHG+ G +A + S++ E DD VYV
Sbjct: 700 RLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE----DDSVYV 755
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 148/368 (40%), Gaps = 4/368 (1%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
+Q+ V+K G ++L++ L G+++YA IF Q+ E + +N++
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISM--LGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
+ ++ LL + K G IHG V K G +
Sbjct: 221 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 280
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
V N L+ MY G A VF++M K + SW++++ + L LL M G
Sbjct: 281 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 340
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
T S L+AC GR +HG+++ + N ++ +L+ MY K G + +
Sbjct: 341 K-SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 399
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
V M + ++ +I G + +AL F + EG++ + + V VLSAC
Sbjct: 400 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 459
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
G + E + + ++ + + G L + L + + N + W +
Sbjct: 460 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNA 518
Query: 408 LLSACKVH 415
+L+A H
Sbjct: 519 MLAANAHH 526
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 341 bits (875), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 297/530 (56%), Gaps = 4/530 (0%)
Query: 77 KWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPF 136
++G ++ A +F+Q+ + TMI G I + +
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC 230
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
++ AC+ GIQ+HG + K G + +V LI+ Y C I + VF++ +
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
VA W+A++ ++ + L + M R +ST S L++C LG+ + G+ +H
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL-PNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
G+ ++ E + V SL+ MY SG + V VF + +KS S+ +I G + HG G
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 317 EALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE-HKIKPTVQHYGC 375
A +F +++ PD++ + G+LSACSH G + +G + F M + I +QHY C
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTC 469
Query: 376 MVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNN 435
MVD+LGR G L+EA LI+ M +KPN++VW +LLSAC++H +++ GE AA +F L+ +
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 436 PGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEF 495
Y++L+N+YA A +W++V+++R +M +++ PG S V K ++F S D QP
Sbjct: 530 SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHC 587
Query: 496 DTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSP 555
IY + + +L+ GY PD L DV++++K E L +HS++LAIAF LI+T EGS
Sbjct: 588 SRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSA 647
Query: 556 MRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+ + +NLR+C DCHT K IS + REI +RD RFHHFK+G CSC DYW
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 133/324 (41%), Gaps = 73/324 (22%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLV---ATCA----------------LAKWGSMEYACSIFR 89
QVH ++KLGF + + ++L+ A C +A W ++ S+ +
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 90 QIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE 149
+ E+ S ++ M+R + I P+ + L +CS LG +
Sbjct: 306 KHEDALSI-FSGMLRNS--------------------ILPNQSTFASGLNSCSALGTLDW 344
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHAC 209
G ++HG K G+ D FV N L+ MY G + A VF K+ +KS+ SW++II A
Sbjct: 345 GKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQ 404
Query: 210 AEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
++ G M R +E T +LSAC H G GR +
Sbjct: 405 HGRGKWAFVIFGQMIRLNK-EPDEITFTGLLSACSHCGFLEKGRKLF------------- 450
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
Y+ SG N ++ YT M+ L G EA ++ ++
Sbjct: 451 -------YYMSSGI---------NHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV--- 491
Query: 330 LAPDDVVYVGVLSACSHAGLVNEG 353
+ P+++V++ +LSAC V+ G
Sbjct: 492 VKPNEMVWLALLSACRMHSDVDRG 515
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 19/189 (10%)
Query: 172 LISMYGKCGAIKHACDVFEKMDEKSVASWSAII-GAHACAEMWHQCLMLLGDMSREGHWR 230
+I+ Y + + A ++F++M + V SW+++I G C +M + + L +M
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDM-NTAVKLFDEMP------ 124
Query: 231 AEESTLVS---VLSACIHLGSPNLG-RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEK 286
E ++VS +++ C G + R + + +++ + N S++ Y++ G ++
Sbjct: 125 --ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN-----SMVHGYLQFGKVDD 177
Query: 287 GVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSH 346
+ +F+ M K+ S+T MI GL + EAL +F +L + + V++AC++
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 347 AGLVNEGLQ 355
A + G+Q
Sbjct: 238 APAFHMGIQ 246
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 299/559 (53%), Gaps = 4/559 (0%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
K VH +LK + D G L+ + G M A +F ++ + ++ MI
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQL--YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
+ P+ F +L C++ G Q+HG V K G DI+
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIY 384
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
V N LI +Y KC + A +F ++ K+ SW+ +I + + + + R
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN- 443
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
E T S L AC L S +LG +HG+ ++ + V V SLIDMY K G I+
Sbjct: 444 QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFA 503
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
VF M S+ +ISG S HG G +AL++ + + P+ + ++GVLS CS+A
Sbjct: 504 QSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNA 563
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
GL+++G +CF++M +H I+P ++HY CMV LLGR+G L +A LI+ +P +P+ ++WR+
Sbjct: 564 GLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRA 623
Query: 408 LLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHL 467
+LSA N E +AE++ +NP + Y++++NMYA A +W +VA IR+ M + +
Sbjct: 624 MLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGV 683
Query: 468 VQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDE 527
+ PG S +E + V+ F P+ I M+ + + GY PD + VLLD+D+
Sbjct: 684 KKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDD 743
Query: 528 DEKRERLKHHSQKLAIAFTLIHT-SEGSPMRISRNLRLCSDCHTYTKFISKICEREITVR 586
+EK +RL HS++LA+A+ L+ S + + I +NLR+CSDCH+ K IS I +R++ +R
Sbjct: 744 EEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIR 803
Query: 587 DRFRFHHFKDGACSCKDYW 605
D RFHHF G CSC D+W
Sbjct: 804 DMNRFHHFHAGVCSCGDHW 822
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 163/367 (44%), Gaps = 7/367 (1%)
Query: 50 VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSI 109
+H+ ++KLG+ ++F G+ L+ A + GS++ A ++F I + ++ V
Sbjct: 168 LHSPIVKLGYDSNAFVGAALIN--AYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 110 MNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQ 169
G P+N+ + LKA LG +HG + K D V
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
GL+ +Y + G + A VF +M + V WS +I ++ + L M RE
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFV 344
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
E TL S+L+ C LG +HG++++ +L++ V +LID+Y K ++ V
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGL 349
+F ++ K+ S+ +I G G G +A +F E L ++ +V + L AC+
Sbjct: 405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 350 VNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV-WRSL 408
++ G+Q + + V ++D+ + G ++ A + M + DV W +L
Sbjct: 465 MDLGVQ-VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM--ETIDVASWNAL 521
Query: 409 LSACKVH 415
+S H
Sbjct: 522 ISGYSTH 528
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 150/383 (39%), Gaps = 55/383 (14%)
Query: 128 GPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACD 187
G D+ Y +L+ C IH + K G D+F N L++ Y K G K A +
Sbjct: 46 GLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALN 105
Query: 188 VFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLG 247
+F++M E++ S+ + +AC + + L + REGH S L + L
Sbjct: 106 LFDEMPERNNVSFVTLAQGYACQDP----IGLYSRLHREGH-ELNPHVFTSFLKLFVSLD 160
Query: 248 SPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMIS 307
+ +H +++ + N V +LI+ Y G ++ VF+ + K + ++S
Sbjct: 161 KAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 308 GLSIHGHGAEALQVFSEILEEGLAPDDVVY------------------------------ 337
+G+ ++L++ S + G P++ +
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 338 -----VGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL 392
VG+L + G +++ + F M K V + M+ + G EA L
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMP-----KNDVVPWSFMIARFCQNGFCNEAVDL 335
Query: 393 IKSMP---IKPNDVVWRSLLSACKVHLNLEIGE----IAAEKLFMLNPNNPGDYLVLANM 445
M + PN+ S+L+ C + +GE + + F L+ L ++
Sbjct: 336 FIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN---ALIDV 392
Query: 446 YARAHKWNDVARIRREMADKHLV 468
YA+ K + ++ E++ K+ V
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNEV 415
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 338 bits (868), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 311/582 (53%), Gaps = 6/582 (1%)
Query: 27 TRFNEQGWYPLLKRCKS---MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEY 83
+R NE + K C + +EE KQ H LK G F + LV +L G+ E
Sbjct: 132 SRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCS-GNGE- 189
Query: 84 ACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSL 143
A + + +++ + G + +N Y L+ S
Sbjct: 190 AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSN 249
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI 203
L + +Q+H + + G ++ LI+MYGKCG + +A VF+ +++ + I
Sbjct: 250 LRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTI 309
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNI 263
+ A+ + + + L L M + E T +L++ L G +HG++L++
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTK-EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG 368
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
+V+V +L++MY KSG IE F M + ++ MISG S HG G EAL+ F
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFD 428
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRA 383
++ G P+ + ++GVL ACSH G V +GL F + + ++P +QHY C+V LL +A
Sbjct: 429 RMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKA 488
Query: 384 GMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLA 443
GM ++A +++ PI+ + V WR+LL+AC V N +G+ AE PN+ G Y++L+
Sbjct: 489 GMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLS 548
Query: 444 NMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIH 503
N++A++ +W VA++R M ++ + + PG S + + + F+++D PE IY +
Sbjct: 549 NIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVK 608
Query: 504 QMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLR 563
++ +++ GY PD + DVDE+++ + L +HS+KLA+A+ LI T E SP+ +++N+R
Sbjct: 609 EVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVR 668
Query: 564 LCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+C DCH+ K ISKI +R I +RD RFHHF DG CSC DYW
Sbjct: 669 ICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 4/251 (1%)
Query: 137 LLKACSLLGGVKEGIQIHGHVF---KAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
LLK C+ ++ G IH H+ ++ +D + N LI++Y KC A +F+ M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
E++V SW A++ + + + L L M G R E V +C + G G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 254 CIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHG 313
HG L+ + V+ +L+ MY + + V ++ ++ +SG G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 314 HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHY 373
E L V + E +++ Y+ L S+ +N LQ M V+
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRM-VRFGFNAEVEAC 275
Query: 374 GCMVDLLGRAG 384
G ++++ G+ G
Sbjct: 276 GALINMYGKCG 286
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 338 bits (866), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 304/566 (53%), Gaps = 13/566 (2%)
Query: 42 KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNT 101
++++ +Q+HAHV++ G ++ + +V K G + A +F Q+
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNM--YVKCGWLVGAKRVFDQMAVKKPVACTG 255
Query: 102 MIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAG 161
++ G G+ D+F++ +LKAC+ L + G QIH V K G
Sbjct: 256 LMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 162 VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLG 221
+ ++ V L+ Y KC + + AC F+++ E + SWSAII + + + +
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Query: 222 DMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKS 281
+ + T S+ AC L N+G +H ++ + +++LI MY K
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC 435
Query: 282 GCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVL 341
GC++ VF++M ++T ISG + +G+ +EAL++F +++ G+ P+ V ++ VL
Sbjct: 436 GCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVL 495
Query: 342 SACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPN 401
+ACSHAGLV +G C M ++ + PT+ HY CM+D+ R+G+L EA +K+MP +P+
Sbjct: 496 TACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPD 555
Query: 402 DVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRRE 461
+ W+ LS C H NLE+GEIA E+L L+P + Y++ N+Y A KW + A + +
Sbjct: 556 AMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKL 615
Query: 462 MADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQV 521
M ++ L + S ++ + K+++F+ D+ P+ IY + EF+G+
Sbjct: 616 MNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLK------EFDGFMEGD--- 666
Query: 522 LLDVDEDEKRERLKHHSQKLAIAFTLI--HTSEGSPMRISRNLRLCSDCHTYTKFISKIC 579
+ + E+RE+L HS++LAIAF LI H + +P+++ +NLR C DCH + K +S +
Sbjct: 667 MFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVT 726
Query: 580 EREITVRDRFRFHHFKDGACSCKDYW 605
EI +RD RFHHFK+G CSC DYW
Sbjct: 727 GHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 137/289 (47%), Gaps = 9/289 (3%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ ++ Y L +AC L + G +H + + +QN ++ MY +C +++ A
Sbjct: 78 GVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDA 137
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
+F++M E + S + +I A+A + + + L M G + S ++L + ++
Sbjct: 138 DKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD-KPPSSMYTTLLKSLVN 196
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
+ + GR IH ++R N ++T +++MYVK G + VF MA K + T +
Sbjct: 197 PRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGL 256
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ---CFKNMQF 362
+ G + G +AL++F +++ EG+ D V+ VL AC+ +N G Q C +
Sbjct: 257 MVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGL 316
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
E ++ +VD + A + + +PNDV W +++S
Sbjct: 317 ESEVSVGTP----LVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISG 360
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/477 (36%), Positives = 278/477 (58%), Gaps = 2/477 (0%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
PD+ + P K+C++L G +H K G D+FV + L+ MY KCG I +A +
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKM 173
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
F++M +++V +WS ++ +A + L L + E + + + SV+S C +
Sbjct: 174 FDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE-NLAVNDYSFSSVISVCANSTL 232
Query: 249 PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISG 308
LGR IHG+ +++ + + V +SL+ +Y K G E VF + K+ + M+
Sbjct: 233 LELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKA 292
Query: 309 LSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKP 368
+ H H + +++F + G+ P+ + ++ VL+ACSHAGLV+EG F M+ E +I+P
Sbjct: 293 YAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK-ESRIEP 351
Query: 369 TVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKL 428
T +HY +VD+LGRAG L+EA +I +MPI P + VW +LL++C VH N E+ AA+K+
Sbjct: 352 TDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKV 411
Query: 429 FMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQ 488
F L P + G ++ L+N YA ++ D A+ R+ + D+ + G S VE KV+ F +
Sbjct: 412 FELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAG 471
Query: 489 DRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLI 548
+R + IY + ++ ++E GY DTS VL +VD DEK + +++HS++LAIAF LI
Sbjct: 472 ERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLI 531
Query: 549 HTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
P+R+ +NLR+C DCH KF+S R I VRD RFH F+DG CSC DYW
Sbjct: 532 TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 4/285 (1%)
Query: 131 NFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFE 190
N I LL + +K G+Q+HG+V K+G+ V N LI+ Y K + FE
Sbjct: 16 NQICDLLLSSARTRSTIK-GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFE 74
Query: 191 KMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPN 250
+KS +WS+II A E+ L L M G+ R ++ L S +C L +
Sbjct: 75 DSPQKSSTTWSSIISCFAQNELPWMSLEFLKKM-MAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 251 LGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLS 310
+GR +H + ++ + +V V +SL+DMY K G I +F M +++ +++ M+ G +
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 311 IHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTV 370
G EAL +F E L E LA +D + V+S C+++ L+ G Q + + +
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIKSSFDSSS 252
Query: 371 QHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
+V L + G+ AY + +P+K N +W ++L A H
Sbjct: 253 FVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQH 296
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 146/338 (43%), Gaps = 30/338 (8%)
Query: 15 LPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCA 74
LPS C+ +L RC + + VH +K G+ D F GS+LV
Sbjct: 119 LPSATKSCA-------------ILSRC---DIGRSVHCLSMKTGYDADVFVGSSLVDM-- 160
Query: 75 LAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIY 134
AK G + YA +F ++ + ++ M+ G + + +++ +
Sbjct: 161 YAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSF 220
Query: 135 PFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDE 194
++ C+ ++ G QIHG K+ FV + L+S+Y KCG + A VF ++
Sbjct: 221 SSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPV 280
Query: 195 KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRC 254
K++ W+A++ A+A + + L M G + T ++VL+AC H G + GR
Sbjct: 281 KNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG-MKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 255 IHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA-EKSRFSYTVMISGLSIHG 313
+ + E SL+DM ++G +++ + V NM + + + +++ ++H
Sbjct: 340 YFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHK 399
Query: 314 HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVN 351
+ A A D V +G +S+ H L N
Sbjct: 400 NTELA----------AFAADKVFELGPVSSGMHISLSN 427
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 332 bits (850), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 162/436 (37%), Positives = 265/436 (60%), Gaps = 3/436 (0%)
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
N +I K G A V +++V +W+ +IG + + + L L +M
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
+ + + S L+AC LG + + +H +++ + ELN ++ ++L+D+Y K G I
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGL 349
VF ++ + MI+G + HG EA++VFSE+ E ++PD + ++G+L+ CSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 350 VNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
+ EG + F M I+P ++HYG MVDLLGRAG ++EAY LI+SMPI+P+ V+WRSLL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 410 SACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQ 469
S+ + + N E+GEIA + L+ GDY++L+N+Y+ KW ++R M+ + + +
Sbjct: 342 SSSRTYKNPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 470 TPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDE 529
G S +E +++F + D S E IY ++ + + + +G+ DT VL+DV E+E
Sbjct: 399 AKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEE 458
Query: 530 KRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRF 589
K E L +HS+KLA+A+ ++ +S G+ +RI +N+R+CSDCH + K +SK+ R I +RDR
Sbjct: 459 KEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRI 518
Query: 590 RFHHFKDGACSCKDYW 605
RFH F+DG CSC+DYW
Sbjct: 519 RFHRFEDGLCSCRDYW 534
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 103/232 (44%), Gaps = 4/232 (1%)
Query: 65 CGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV-SIMNXXXXXXXXXXXX 123
C NL+ +L K G A + R + +N MI G V ++
Sbjct: 99 CNINLIIE-SLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 124 XXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIK 183
I P+ F + L AC+ LG + +H + +G+ + + + L+ +Y KCG I
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIG 217
Query: 184 HACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSAC 243
+ +VF + V+ W+A+I A + + + + +M E H + T + +L+ C
Sbjct: 218 TSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAE-HVSPDSITFLGLLTTC 276
Query: 244 IHLGSPNLGRCIHGILLRNIS-ELNVVVKTSLIDMYVKSGCIEKGVCVFQNM 294
H G G+ G++ R S + + +++D+ ++G +++ + ++M
Sbjct: 277 SHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESM 328
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 288/510 (56%), Gaps = 44/510 (8%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
L C+ L + Q HG K GV + V N L+ MYGKCG + +FE+++EKS
Sbjct: 117 LFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKS 176
Query: 197 VASWSAII-------GAHACAEMWH------------------------QCLMLLGDMS- 224
V SW+ ++ G E++H + L LL +M
Sbjct: 177 VVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVF 236
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN-------ISELNVVVKTSLIDM 277
R GH TL S+LSAC G+ +GR +H L+ S +V+V T+L+DM
Sbjct: 237 RCGHG-LNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDM 295
Query: 278 YVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
Y K G I+ + VF+ M +++ ++ + SGL++HG G + +F +++ E + PDD+ +
Sbjct: 296 YAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTF 354
Query: 338 VGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP 397
VLSACSH+G+V+EG +CF +++F + ++P V HY CMVDLLGRAG++ EA L++ MP
Sbjct: 355 TAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP 413
Query: 398 IKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVAR 457
+ PN+VV SLL +C VH +EI E +L ++P N ++++NMY + +
Sbjct: 414 VPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADG 473
Query: 458 IRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPD 517
+R + + + + PG S + V++F S DRS P IY ++++ ++ GY PD
Sbjct: 474 LRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPD 533
Query: 518 TSQVL--LDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFI 575
S ++ + D +EK + L HS+KLA+ F L+ T +P+ + +NLR+C DCH+ K +
Sbjct: 534 VSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIV 593
Query: 576 SKICEREITVRDRFRFHHFKDGACSCKDYW 605
SK+ +REI +RDR RFH FK G+CSC DYW
Sbjct: 594 SKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 133/322 (41%), Gaps = 44/322 (13%)
Query: 136 FLLKACSLLGGVKEGIQIHGHVFKAGV--GDDIFVQNGLISMYGKCGAIKHACDVFEK-- 191
LL+ C+ ++ G ++H + +G+ ++ N L Y G + A +F++
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 192 MDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL 251
+ EK W+ ++ + + + + L +M R+ ++ ++V + C L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRK-RVEIDDVSVVCLFGVCAKLEDLGF 129
Query: 252 GRCIHGILLRNISELNVVVKTSLIDMYVKSGCI--------------------------- 284
+ HG+ ++ +V V +L+DMY K G +
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 285 ----EKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSE-ILEEGLAPDDVVYVG 339
E+G VF M E++ ++TVM++G G E L++ +E + G + V
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 340 VLSACSHAG--LVNEGLQCF----KNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
+LSAC+ +G +V + + + M E V +VD+ + G + + +
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 394 KSMPIKPNDVVWRSLLSACKVH 415
+ M K N V W +L S +H
Sbjct: 310 RLMR-KRNVVTWNALFSGLAMH 330
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 325 bits (834), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 199/568 (35%), Positives = 306/568 (53%), Gaps = 14/568 (2%)
Query: 50 VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRG-NVS 108
+H LKLGF D+F ++LV + K + A +F ++ EP + ++I G N
Sbjct: 51 LHTLTLKLGFASDTFTVNHLV--ISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDM 108
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
+ P+ + + + KACS L + G IH + +G+ +I V
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVV 168
Query: 169 QNGLISMYGKCGAIKHACDVFEKM--DEKSVASWSAIIGAHACAEMWHQCLMLLGDMSRE 226
+ L+ MYGKC ++ A VF+ M ++V SW+++I A+A H+ + L +
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 227 -GHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
RA + L SV+SAC LG G+ HG++ R E N VV TSL+DMY K G +
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 286 KGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS 345
+F + S SYT MI + HG G A+++F E++ + P+ V +GVL ACS
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 346 HAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPI--KPNDV 403
H+GLVNEGL+ M ++ + P +HY C+VD+LGR G + EAY L K++ + + +
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGAL 408
Query: 404 VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMA 463
+W +LLSA ++H +EI A+++L N Y+ L+N YA + W D +R EM
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
Query: 464 DKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYK------PD 517
V+ S +E + VY F + D S E I + +E +++ G++
Sbjct: 469 RSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITT 528
Query: 518 TSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISK 577
+S V +DVDE+ K E + H ++LA+A+ L+H GS +RI NLR+C DCH K IS+
Sbjct: 529 SSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISE 588
Query: 578 ICEREITVRDRFRFHHFKDGACSCKDYW 605
I EREI VRD RFH FK+G+C+C+DYW
Sbjct: 589 IVEREIVVRDVNRFHCFKNGSCTCRDYW 616
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 325 bits (833), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 300/557 (53%), Gaps = 8/557 (1%)
Query: 48 KQVHAHVLKLGFFCD-SFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGN 106
+ +HA+V+ GF D S C S T GS A +F ++E + TMI G
Sbjct: 317 RDIHAYVITTGFAVDISVCNS---LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 107 VSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDI 166
+ PD +L AC+ LG + G+++H KA + +
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433
Query: 167 FVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSRE 226
V N LI+MY KC I A D+F + K+V SW++II + L+ L M
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT 493
Query: 227 GHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEK 286
+ TL + L+AC +G+ G+ IH +LR L+ + +L+DMYV+ G +
Sbjct: 494 --LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 287 GVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSH 346
F N +K S+ ++++G S G G+ +++F +++ + PD++ ++ +L CS
Sbjct: 552 AWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 347 AGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWR 406
+ +V +GL F M+ ++ + P ++HY C+VDLLGRAG L+EA+ I+ MP+ P+ VW
Sbjct: 611 SQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 407 SLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKH 466
+LL+AC++H +++GE++A+ +F L+ + G Y++L N+YA KW +VA++RR M +
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729
Query: 467 LVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVD 526
L G S VE + KV+ F+S D+ P+ I ++ ++ G + +D
Sbjct: 730 LTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDET 789
Query: 527 EDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVR 586
E + E HS++ AIAF LI+T G P+ +++NL +C +CH KFISK REI+VR
Sbjct: 790 EISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVR 849
Query: 587 DRFRFHHFKDGACSCKD 603
D FHHFKDG CSC D
Sbjct: 850 DAEHFHHFKDGECSCGD 866
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 191/396 (48%), Gaps = 9/396 (2%)
Query: 24 ELSTRFNEQGWYPLLKRC---KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGS 80
EL +E + L++ C ++ EE +V++ L G+ +A ++G+
Sbjct: 87 ELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAM--FVRFGN 144
Query: 81 MEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXX-XXXXXXXXXGIGPDNFIYPFLLK 139
+ A +F ++ E F +N ++ G G+ PD + +P +L+
Sbjct: 145 LVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLR 204
Query: 140 ACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVAS 199
C + + G ++H HV + G DI V N LI+MY KCG +K A +F++M + + S
Sbjct: 205 TCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS 264
Query: 200 WSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL 259
W+A+I + M H+ L L M R + TL SV+SAC LG LGR IH +
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAM-RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYV 323
Query: 260 LRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEAL 319
+ +++ V SL MY+ +G + +F M K S+T MISG + +A+
Sbjct: 324 ITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAI 383
Query: 320 QVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDL 379
+ + ++ + PD++ VLSAC+ G ++ G++ K + + ++ V ++++
Sbjct: 384 DTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK-LAIKARLISYVIVANNLINM 442
Query: 380 LGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
+ + +A + ++P + N + W S+++ +++
Sbjct: 443 YSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 137/329 (41%), Gaps = 49/329 (14%)
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
+ + LL M +E +E V+++ C + G ++ I L ++S L V + +
Sbjct: 77 EAMKLLNSM-QELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAF 135
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEIL-EEGLAPD 333
+ M+V+ G + VF M+E++ FS+ V++ G + G+ EA+ ++ +L G+ PD
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 334 DVVYVGVLSACS-----------HAGLVNEG---------------LQC----FKNMQFE 363
+ VL C H +V G ++C + F+
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 364 HKIKPTVQHYGCMVDLLGRAGMLREAYGL---IKSMPIKPNDVVWRSLLSACKVHLNLEI 420
+ + + M+ GM E L ++ + + P+ + S++SAC++ + +
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 421 G-EIAAEKLFMLNPNNPGDYLV---LANMYARAHKWNDVARIRREMADKHLVQ----TPG 472
G +I A +++ D V L MY A W + ++ M K +V G
Sbjct: 316 GRDIHA---YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 473 FS---MVEAERKVYKFVSQDRSQPEFDTI 498
+ + + Y+ + QD +P+ T+
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITV 401
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 281/488 (57%), Gaps = 7/488 (1%)
Query: 36 PLLKRCKSMEEFK--QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
PLLK + + Q HAH++K G D F ++L++ + G ++A +F E+
Sbjct: 109 PLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLIS--GYSSSGLFDFASRLFDGAED 166
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+ MI G V + G+ + +LKA + V+ G +
Sbjct: 167 KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSV 226
Query: 154 HGHVFKAG-VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEM 212
HG + G V D+F+ + L+ MYGKC A VF++M ++V +W+A+I + +
Sbjct: 227 HGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRC 286
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKT 272
+ + +++ +M + E TL SVLSAC H+G+ + GR +H +++N E+N T
Sbjct: 287 FDKGMLVFEEMLK-SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGT 345
Query: 273 SLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAP 332
+LID+YVK GC+E+ + VF+ + EK+ +++T MI+G + HG+ +A +F +L ++P
Sbjct: 346 TLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSP 405
Query: 333 DDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL 392
++V ++ VLSAC+H GLV EG + F +M+ ++P HY CMVDL GR G+L EA L
Sbjct: 406 NEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKAL 465
Query: 393 IKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKW 452
I+ MP++P +VVW +L +C +H + E+G+ AA ++ L P++ G Y +LAN+Y+ + W
Sbjct: 466 IERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNW 525
Query: 453 NDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQP-EFDTIYNMIHQMEWQLEF 511
++VAR+R++M D+ +V++PGFS +E + K+ +F++ D +P E D +Y + + Q+
Sbjct: 526 DEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
Query: 512 EGYKPDTS 519
D +
Sbjct: 586 PDELEDVT 593
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 300/564 (53%), Gaps = 46/564 (8%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
K +H ++L+ + D + + L+ K G + YA +F ++ +N+++ G
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDM--YIKTGYLPYARMVFDMMDAKNIVAWNSLVSG-- 300
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
Y LLK E + I + K G+ D
Sbjct: 301 ------------------------LSYACLLKDA-------EALMIR--MEKEGIKPDAI 327
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVA----SWSAIIGAHACAEMWHQCLMLLGDM 223
N L S Y G + A DV KM EK VA SW+AI + + L + M
Sbjct: 328 TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 387
Query: 224 SREGHW--RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKS 281
EG A STL+ +L C+ L + G+ +HG LR + V T+L+DMY KS
Sbjct: 388 QEEGVGPNAATMSTLLKIL-GCLSL--LHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 444
Query: 282 GCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVL 341
G ++ + +F + KS S+ M+ G ++ G G E + FS +LE G+ PD + + VL
Sbjct: 445 GDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Query: 342 SACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPN 401
S C ++GLV EG + F M+ + I PT++H CMVDLLGR+G L EA+ I++M +KP+
Sbjct: 505 SVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPD 564
Query: 402 DVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRRE 461
+W + LS+CK+H +LE+ EIA ++L +L P+N +Y+++ N+Y+ ++W DV RIR
Sbjct: 565 ATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNL 624
Query: 462 MADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQV 521
M + + +S ++ ++ V+ F ++ ++ P+ IY ++++ +++ GY PDTS +
Sbjct: 625 MRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCI 684
Query: 522 LLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICER 581
D+ + EK + L H++KLA+ + LI +P+R+ +N +CSD HT K++S + R
Sbjct: 685 HQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNR 744
Query: 582 EITVRDRFRFHHFKDGACSCKDYW 605
EI +++ R HHF+DG CSC D W
Sbjct: 745 EIVLQEGARVHHFRDGKCSCNDSW 768
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 159/385 (41%), Gaps = 73/385 (18%)
Query: 80 SMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLK 139
S+ +A +F ++ + +N ++ N+ N G + LL+
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 140 ACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVAS 199
CS G EG QIHG+V + G+ ++ + N LI MY + G ++ + VF M +++++S
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS 157
Query: 200 WSAIIGAHACAEMWHQCLMLLGDMSREG------HW------------------------ 229
W++I+ ++ + LL +M G W
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 230 ----RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
+ S++ S+L A G LG+ IHG +LRN +V V+T+LIDMY+K+G +
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 286 KGVCVFQNMAEKSRFSYTVMISGLSIH--------------------------------- 312
VF M K+ ++ ++SGLS
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA 337
Query: 313 --GHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTV 370
G +AL V ++ E+G+AP+ V + + S CS G L+ F MQ E + P
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ-EEGVGPNA 396
Query: 371 QHYGCMVDLLGRAGML---REAYGL 392
++ +LG +L +E +G
Sbjct: 397 ATMSTLLKILGCLSLLHSGKEVHGF 421
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 3/239 (1%)
Query: 150 GIQIHGHVFKAGVGD-DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
G+ IHG + K G+ + D V + + YG+C ++ A +F++M ++ +W+ I+ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 209 CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNV 268
+ W + + L +M G +A +ST+V +L C + GR IHG +LR E NV
Sbjct: 66 RSGNWEKAVELFREMQFSGA-KAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
+ SLI MY ++G +E VF +M +++ S+ ++S + G+ +A+ + E+
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLR 387
GL PD V + +LS + GL + + K MQ +KP+ ++ + G L+
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHLK 242
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 177/423 (41%), Gaps = 55/423 (13%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFCD-SFCGS------------------NLVATCA 74
LL+ C + E F +Q+H +VL+LG + S C S N +
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 75 LAKW----------GSMEYACSIFRQIE----EPGSFEYNTMIRGNVSIMNXXXXXXXXX 120
L+ W G ++ A + ++E +P +N+++ G S
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 121 XXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCG 180
G+ P LL+A + G +K G IHG++ + + D++V+ LI MY K G
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 181 AIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVL 240
+ +A VF+ MD K++ +W++++ + A + L+ M +EG + + T S+
Sbjct: 275 YLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGI-KPDAITWNSLA 333
Query: 241 SACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK--- 297
S LG P + G + NVV T++ K+G + VF M E+
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Query: 298 ---SRFSYTVMISG-LSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEG 353
+ S + I G LS+ G E V L + L D V ++ +G +
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKE---VHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 354 LQCFKNMQFEHKIKPTVQHYGCMV---DLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLS 410
++ F ++ ++ + CM+ + GR A+ ++ ++P+ + + S+LS
Sbjct: 451 IEIFWGIK-----NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Query: 411 ACK 413
CK
Sbjct: 506 VCK 508
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 292/563 (51%), Gaps = 8/563 (1%)
Query: 45 EEFKQVHAHVLKLGF-FCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+E ++ H + LG + F GS LV K+G A + ++EE +I
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDM--YVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
G + P+ + Y +L +C L + G IHG + K+G
Sbjct: 240 VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFE 299
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
+ Q L++MY +C + + VF+ ++ + SW+++I L+ M
Sbjct: 300 SALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM 359
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC 283
R+ + TL S L C +L GR IHGI+ + + + + LID+Y K GC
Sbjct: 360 MRDS-IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGC 418
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+ VF ++E S MI + +G G EAL +F ++ GL P+DV + VL A
Sbjct: 419 SDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLA 478
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV 403
C+++ LV EG + F + + + KI T HY CMVDLLGRAG L EA ++ + I P+ V
Sbjct: 479 CNNSRLVEEGCELFDSFR-KDKIMLTNDHYACMVDLLGRAGRLEEAE-MLTTEVINPDLV 536
Query: 404 VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMA 463
+WR+LLSACKVH +E+ E K+ + P + G ++++N+YA KWN V ++ +M
Sbjct: 537 LWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMK 596
Query: 464 DKHLVQTPGFSMVEAERKVYKFVSQDR-SQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVL 522
D L + P S VE ++ + F++ D S P + I + ++ + + GY D S V
Sbjct: 597 DMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVF 656
Query: 523 LDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICERE 582
D++E K L HS+KLAIAF + GS +RI +NLR+C DCH++ K +S++ +RE
Sbjct: 657 QDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKRE 715
Query: 583 ITVRDRFRFHHFKDGACSCKDYW 605
I RD RFHHF+DG+CSC DYW
Sbjct: 716 IICRDSKRFHHFRDGSCSCGDYW 738
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 27/315 (8%)
Query: 134 YPFLLKAC---SLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFE 190
+ LL+ C + G+K I H+ K+G +I + L+ KCG I +A VF+
Sbjct: 68 FSQLLRQCIDERSISGIK---TIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFD 123
Query: 191 KMDEKSVASWSAIIG-------AHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSAC 243
M E+ + +W+++I + EM+ LM+ ++ +E TL SV A
Sbjct: 124 GMSERHIVTWNSLIAYLIKHRRSKEAVEMYR--LMITNNV------LPDEYTLSSVFKAF 175
Query: 244 IHLGSPNLGRCIHGI-LLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSY 302
L + HG+ ++ + NV V ++L+DMYVK G + V + EK
Sbjct: 176 SDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLI 235
Query: 303 TVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQF 362
T +I G S G EA++ F +L E + P++ Y VL +C + + G + +
Sbjct: 236 TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNG-KLIHGLMV 294
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGE 422
+ + + ++ + R ++ ++ + K + PN V W SL+S + E+
Sbjct: 295 KSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGREEMAL 353
Query: 423 IAAEKLFM--LNPNN 435
I K+ + PN+
Sbjct: 354 IEFRKMMRDSIKPNS 368
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 283/514 (55%), Gaps = 40/514 (7%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKW----GSMEYACSIFRQIEEPGSFEYNTMI 103
K++H HV+K G GSNL AL K G M+ A +F + + F +N MI
Sbjct: 155 KKLHCHVVKFGL------GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMI 208
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
G + + P + +L ACS + ++H +V +
Sbjct: 209 SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII------GAHACAEMWHQCL 217
+ ++N L++ Y CG + A +F M + V SW++I+ G A + +
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 218 MLLGDMSR----EGHWRA--------------------EESTLVSVLSACIHLGSPNLGR 253
+ +S +G+ RA +E T+VSVL+AC HLGS +G
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 254 CIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHG 313
I + +N + +VVV +LIDMY K GC EK VF +M ++ +F++T M+ GL+ +G
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 314 HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHY 373
G EA++VF ++ + + PDD+ Y+GVLSAC+H+G+V++ + F M+ +H+I+P++ HY
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY 508
Query: 374 GCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNP 433
GCMVD+LGRAG+++EAY +++ MP+ PN +VW +LL A ++H + + E+AA+K+ L P
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEP 568
Query: 434 NNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQP 493
+N Y +L N+YA +W D+ +RR++ D + +TPGFS++E ++FV+ D+S
Sbjct: 569 DNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHL 628
Query: 494 EFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDE 527
+ + IY + ++ + F Y PDTS++L + +
Sbjct: 629 QSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 192/442 (43%), Gaps = 68/442 (15%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
+L CK+ ++FKQ+H+ + G + L G + YA +F +I EP
Sbjct: 40 ILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDV 99
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE-GIQIHG 155
+N MI+G + G+ PD+ +PFLL GG G ++H
Sbjct: 100 VVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
HV K G+G +++VQN L+ MY CG + A VF++ ++ V SW+ +I + + + +
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE 219
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGI----------------- 258
+ LL +M R TL+ VLSAC + +L + +H
Sbjct: 220 SIELLVEMER-NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALV 278
Query: 259 --------------LLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
+ R++ +V+ TS++ YV+ G ++ F M + R S+T+
Sbjct: 279 NAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTI 338
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
MI G G E+L++F E+ G+ PD+ V VL+AC+H G + G + K ++
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKN 397
Query: 365 KIKPTVQHYGCMVDL-------------------------------LGRAGMLREAYGL- 392
KIK V ++D+ L G +EA +
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVF 457
Query: 393 --IKSMPIKPNDVVWRSLLSAC 412
++ M I+P+D+ + +LSAC
Sbjct: 458 FQMQDMSIQPDDITYLGVLSAC 479
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 251/452 (55%), Gaps = 19/452 (4%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
L+ +CKS++ KQ+HA ++ +G ++ S L+ L+ + YA SI RQI P
Sbjct: 15 LISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLH---LSSTVCLSYALSILRQIPNPSV 71
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXX------XXXXXGIGPDNFIYPFLLKACSLLGGV-KE 149
F YNT+I VS N + P+ F YP L KA +
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 150 GIQIHGHVFK--AGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAH 207
G +H HV K V D FVQ L+ Y CG ++ A +FE++ E +A+W+ ++ A+
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 208 ACAEMW---HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS 264
A +E + L+L M R E +LV+++ +C +LG G H +L+N
Sbjct: 192 ANSEEIDSDEEVLLLFMRM----QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNL 247
Query: 265 ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSE 324
LN V TSLID+Y K GC+ VF M+++ Y MI GL++HG G E ++++
Sbjct: 248 TLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKS 307
Query: 325 ILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAG 384
++ +GL PD +V +SACSH+GLV+EGLQ F +M+ + I+P V+HYGC+VDLLGR+G
Sbjct: 308 LISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 385 MLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLAN 444
L EA IK MP+KPN +WRS L + + H + E GEIA + L L N G+Y++L+N
Sbjct: 368 RLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSN 427
Query: 445 MYARAHKWNDVARIRREMADKHLVQTPGFSMV 476
+YA ++W DV + R M D + ++PG S +
Sbjct: 428 IYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 274/505 (54%), Gaps = 39/505 (7%)
Query: 42 KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNT 101
+++ KQ H +++ G D+ + + C+ A G + YA S+F P ++ +NT
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNA--GHLRYAYSVFTHQPCPNTYLHNT 83
Query: 102 MIRGNVSIMNXXXXXXXXXXXX----XXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHV 157
MIR +S+++ PD F +PF+LK + V G QIHG V
Sbjct: 84 MIRA-LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQV 142
Query: 158 FKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCL 217
G + V GLI MY CG + A +F++M K V W+A++ + +
Sbjct: 143 VVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 218 MLLGDMS----REGHW-----------RAEES-----------------TLVSVLSACIH 245
LL M E W RA E+ TL++VLSAC
Sbjct: 203 SLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
LGS LG I + V + ++IDMY KSG I K + VF+ + E++ ++T +
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
I+GL+ HGHGAEAL +F+ +++ G+ P+DV ++ +LSACSH G V+ G + F +M+ ++
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAA 425
I P ++HYGCM+DLLGRAG LREA +IKSMP K N +W SLL+A VH +LE+GE A
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Query: 426 EKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKF 485
+L L PNN G+Y++LAN+Y+ +W++ +R M + + G S +E E +VYKF
Sbjct: 443 SELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKF 502
Query: 486 VSQDRSQPEFDTIYNMIHQMEWQLE 510
+S D + P+ + I+ ++ +M+ Q++
Sbjct: 503 ISGDLTHPQVERIHEILQEMDLQIQ 527
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/584 (31%), Positives = 296/584 (50%), Gaps = 60/584 (10%)
Query: 35 YPLLKRCKSMEEFK----QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQ 90
+P + + S F+ +HA LK CDSF +LV AK G +++A +F
Sbjct: 129 FPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDM--YAKTGQLKHAFQVFE- 185
Query: 91 IEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEG 150
E P + +++ NV L+ G
Sbjct: 186 -ESPDRIKKESILIWNV-----------------------------------LINGYCRA 209
Query: 151 IQIH--GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
+H +F++ + + LI Y G + A +FE M EK+V SW+ +I +
Sbjct: 210 KDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFS 269
Query: 209 CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNV 268
+ + +M +G + E T+ +VLSAC G+ G IHG +L N +L+
Sbjct: 270 QTGDYETAISTYFEMLEKG-LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDR 328
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
+ T+L+DMY K G ++ VF NM K S+T MI G ++HG +A+Q F +++
Sbjct: 329 AIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYS 388
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
G PD+VV++ VL+AC ++ V+ GL F +M+ ++ I+PT++HY +VDLLGRAG L E
Sbjct: 389 GEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNE 448
Query: 389 AYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYAR 448
A+ L+++MPI P+ W +L ACK H E ++ L L+P G Y+ L +A
Sbjct: 449 AHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHAS 508
Query: 449 AHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQP-------EFDTIYNM 501
DV + R + + ++ G+S +E + ++ KF + D S + D I ++
Sbjct: 509 KGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISL 568
Query: 502 IHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRN 561
Q +GY P + D++E+EK HS+KLA+ + T+ G+ +RI +N
Sbjct: 569 AIQ-------KGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKN 621
Query: 562 LRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
LR+C DCH+ K++SKI +R+I +RD +FHHFKDG CSC DYW
Sbjct: 622 LRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 188/422 (44%), Gaps = 50/422 (11%)
Query: 30 NEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFR 89
+E + L+ CK + VHA +L+ G S + LV+ +L K S +Y+ SIFR
Sbjct: 28 DESHFISLIHACKDTASLRHVHAQILRRGVLS-SRVAAQLVSCSSLLK--SPDYSLSIFR 84
Query: 90 QIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE 149
EE F N +IRG G+ PD +PF+LK+ S LG
Sbjct: 85 NSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWL 144
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFE----KMDEKSVASWSAIIG 205
G +H K V D FV+ L+ MY K G +KHA VFE ++ ++S+ W+ +I
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 206 AHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISE 265
G+ RA++ +H+ + L R++ E
Sbjct: 205 ---------------------GYCRAKD----------MHMAT---------TLFRSMPE 224
Query: 266 LNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEI 325
N ++LI YV SG + + +F+ M EK+ S+T +I+G S G A+ + E+
Sbjct: 225 RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 326 LEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGM 385
LE+GL P++ VLSACS +G + G++ + ++ IK +VD+ + G
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI-LDNGIKLDRAIGTALVDMYAKCGE 343
Query: 386 LREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANM 445
L A + +M K + + W +++ VH I + M + P + + LA +
Sbjct: 344 LDCAATVFSNMNHK-DILSWTAMIQGWAVHGRFHQA-IQCFRQMMYSGEKPDEVVFLAVL 401
Query: 446 YA 447
A
Sbjct: 402 TA 403
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 270/481 (56%), Gaps = 15/481 (3%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
LK C S++ Q+H + DSF S LV +L+ + +A ++ +
Sbjct: 19 FLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTP 78
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGH 156
+N + RG S + GI P+ +PFLLKAC+ G+ G QI
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 157 VFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGA---HACAEMW 213
V K G D++V N LI +YG C A VF++M E++V SW++I+ A + +
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 214 HQCLM-LLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKT 272
+C ++G + +E+T+V +LSAC G+ +LG+ +H ++ ELN + T
Sbjct: 199 FECFCEMIGK-----RFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGT 251
Query: 273 SLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG-LA 331
+L+DMY KSG +E VF+ M +K+ ++++ MI GL+ +G EALQ+FS++++E +
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 332 PDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYG 391
P+ V ++GVL ACSH GLV++G + F M+ HKIKP + HYG MVD+LGRAG L EAY
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYD 371
Query: 392 LIKSMPIKPNDVVWRSLLSACKVHLNLE---IGEIAAEKLFMLNPNNPGDYLVLANMYAR 448
IK MP +P+ VVWR+LLSAC +H + + IGE ++L L P G+ +++AN +A
Sbjct: 372 FIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAE 431
Query: 449 AHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQ 508
A W + A +RR M + + + G S +E ++F S + E+ +IY ++ ++Q
Sbjct: 432 ARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQ 491
Query: 509 L 509
L
Sbjct: 492 L 492
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 273/500 (54%), Gaps = 35/500 (7%)
Query: 31 EQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQ 90
E + P L+R KS E+K+++A ++ G SF + +V C K M+YA +F Q
Sbjct: 10 ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD--KIEDMDYATRLFNQ 67
Query: 91 IEEPGSFEYNTMIRGNV--SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVK 148
+ P F YN++IR S+ + PD F +PF+ K+C+ LG
Sbjct: 68 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFEL-PDRFTFPFMFKSCASLGSCY 126
Query: 149 EGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
G Q+HGH+ K G + +N LI MY K + A VF++M E+ V SW++++ +A
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 209 -------CAEMWHQCL---------MLLG-----------DMSREGHW---RAEESTLVS 238
++H L M+ G D RE +E +L+S
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 239 VLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKS 298
VL +C LGS LG+ IH R V +LI+MY K G I + + +F M K
Sbjct: 247 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKD 306
Query: 299 RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFK 358
S++ MISG + HG+ A++ F+E+ + P+ + ++G+LSACSH G+ EGL+ F
Sbjct: 307 VISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD 366
Query: 359 NMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNL 418
M+ +++I+P ++HYGC++D+L RAG L A + K+MP+KP+ +W SLLS+C+ NL
Sbjct: 367 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 426
Query: 419 EIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEA 478
++ +A + L L P + G+Y++LAN+YA KW DV+R+R+ + ++++ +TPG S++E
Sbjct: 427 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEV 486
Query: 479 ERKVYKFVSQDRSQPEFDTI 498
V +FVS D S+P + I
Sbjct: 487 NNIVQEFVSGDNSKPFWTEI 506
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/503 (33%), Positives = 275/503 (54%), Gaps = 35/503 (6%)
Query: 40 RCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEY 99
+C +M E KQ+HA ++K G D+ S ++A C A M YA +F +I F +
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCC-ASPSDMNYAYLVFTRINHKNPFVW 92
Query: 100 NTMIRG--NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHV 157
NT+IRG S + P YP + KA LG ++G Q+HG V
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 158 FKAGVGDDIFVQNGLISMY-------------------------------GKCGAIKHAC 186
K G+ DD F++N ++ MY KCG I A
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 187 DVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHL 246
++F++M +++ SW+++I + L + +M +E + + T+VS+L+AC +L
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM-QEKDVKPDGFTMVSLLNACAYL 271
Query: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMI 306
G+ GR IH ++RN ELN +V T+LIDMY K GCIE+G+ VF+ +K + MI
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 307 SGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKI 366
GL+ +G A+ +FSE+ GL PD V ++GVL+AC+H+G V+ + F+ M+ ++ I
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 367 KPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAE 426
+P+++HY MV++LG AG+L EA LIK+MP++ + V+W SLLSAC+ N+E+ + AA+
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451
Query: 427 KLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFV 486
L L+P+ Y++L+N YA + + R M ++ + + G S +E + +V++F+
Sbjct: 452 CLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFI 511
Query: 487 SQDRSQPEFDTIYNMIHQMEWQL 509
S + P+ IY+++ + W +
Sbjct: 512 SCGGTHPKSAEIYSLLDILNWDV 534
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 294/567 (51%), Gaps = 22/567 (3%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCAL---AKWGSMEYACSIFRQIEEPGSFEYNTMI- 103
K++H H ++ G +V T L +K+G + YA IF + + +N MI
Sbjct: 251 KEIHCHAVRSRIET----GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 306
Query: 104 ----RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFK 159
G V+ G+ PD LL A ++L EG IHG+ +
Sbjct: 307 CYARNGRVT----DAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMR 358
Query: 160 AGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLML 219
G + ++ LI MYG+CG +K A +F++M EK+V SW++II A+ + L L
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 220 LGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYV 279
++ + + +T+ S+L A S + GR IH ++++ N ++ SL+ MY
Sbjct: 419 FQEL-WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 280 KSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVG 339
G +E F ++ K S+ +I ++HG G ++ +FSE++ + P+ +
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 340 VLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK 399
+L+ACS +G+V+EG + F++M+ E+ I P ++HYGCM+DL+GR G A ++ MP
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 400 PNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIR 459
P +W SLL+A + H ++ I E AAE++F + +N G Y++L NMYA A +W DV RI+
Sbjct: 598 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 657
Query: 460 REMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQL-EFEGYKPDT 518
M K + +T S VEA+ K + F + DRS + IY ++ + + E + Y
Sbjct: 658 LLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCV 717
Query: 519 SQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKI 578
S++ + + + HS +LA F LI T G + + N R+C CH + + S++
Sbjct: 718 SRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRL 777
Query: 579 CEREITVRDRFRFHHFKDGACSCKDYW 605
REI V D FHHF +G CSC +YW
Sbjct: 778 TRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 168/333 (50%), Gaps = 9/333 (2%)
Query: 81 MEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKA 140
ME A +F ++ + +F +N MI+G S G+ D F YPF++K+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 141 CSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASW 200
+ + ++EG +IH V K G D++V N LIS+Y K G A VFE+M E+ + SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 201 SAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILL 260
+++I + LML +M + G ++ + + +S L AC H+ SP +G+ IH +
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 261 RN-ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEAL 319
R+ I +V+V TS++DMY K G + +F M +++ ++ VMI + +G +A
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 320 QVFSEILEE-GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVD 378
F ++ E+ GL PD + + +L A + + EG + P + ++D
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASA----ILEG-RTIHGYAMRRGFLPHMVLETALID 373
Query: 379 LLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+ G G L+ A + M K N + W S+++A
Sbjct: 374 MYGECGQLKSAEVIFDRMAEK-NVISWNSIIAA 405
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 183/387 (47%), Gaps = 15/387 (3%)
Query: 35 YPLLKRC----KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQ 90
YP + + S+EE K++HA V+KLGF D + ++L++ K G A +F +
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISL--YMKLGCAWDAEKVFEE 190
Query: 91 IEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEG 150
+ E +N+MI G +++ + G PD F L ACS + K G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 151 IQIHGHVFKAGV-GDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHAC 209
+IH H ++ + D+ V ++ MY K G + +A +F M ++++ +W+ +IG +A
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 210 AEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
+ MS + + + T +++L A L GR IHG +R ++V
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMV 366
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
++T+LIDMY + G ++ +F MAEK+ S+ +I+ +G AL++F E+ +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
L PD +L A + + ++EG + + T+ +V + G L +A
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII-LNSLVHMYAMCGDLEDA 485
Query: 390 YGLIKSMPIKPNDVV-WRSLLSACKVH 415
+ +K DVV W S++ A VH
Sbjct: 486 RKCFNHILLK--DVVSWNSIIMAYAVH 510
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 270/512 (52%), Gaps = 38/512 (7%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
+L+ CK++ +HA +++ D+F L+ C+ S++YA +F + P
Sbjct: 35 VLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS--TLDSVDYAYDVFSYVSNPNV 92
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGH 156
+ Y MI G VS + PDN++ +LKAC L K +IH
Sbjct: 93 YLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL----KVCREIHAQ 148
Query: 157 VFKAGVGD---------DIFVQNG----------------------LISMYGKCGAIKHA 185
V K G G +I+ ++G +I+ Y +CG IK A
Sbjct: 149 VLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEA 208
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
++F+ + K W+A+I + ++ L L +M E + A E T V VLSAC
Sbjct: 209 LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCVLSACSD 267
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
LG+ LGR +H + EL+ V +LI+MY + G I + VF+ M +K SY M
Sbjct: 268 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 327
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
ISGL++HG EA+ F +++ G P+ V V +L+ACSH GL++ GL+ F +M+
Sbjct: 328 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFN 387
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAA 425
++P ++HYGC+VDLLGR G L EAY I+++PI+P+ ++ +LLSACK+H N+E+GE A
Sbjct: 388 VEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIA 447
Query: 426 EKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKF 485
++LF + G Y++L+N+YA + KW + IR M D + + PG S +E + ++++F
Sbjct: 448 KRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEF 507
Query: 486 VSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPD 517
+ D + P + IY + ++ L F+ + D
Sbjct: 508 LVGDIAHPHKEAIYQRLQELNRILRFKENQID 539
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 115/303 (37%), Gaps = 72/303 (23%)
Query: 231 AEESTLVSVLSACIHLGS-PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
+ TL+SVL +C ++ P+ IH ++R + + V LI + ++
Sbjct: 27 SRRKTLISVLRSCKNIAHVPS----IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYD 82
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS---- 345
VF ++ + + YT MI G G A+ + ++ ++ + PD+ V VL AC
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVC 142
Query: 346 ---HAGLVNEG------------------------------------------LQCFKNM 360
HA ++ G + C+
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 361 QF---------EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSL 408
F + KIK TV + M+D L R + +A L + M + N+ +
Sbjct: 203 GFIKEALELFQDVKIKDTVC-WTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCV 261
Query: 409 LSACKVHLNLEIGEIA---AEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADK 465
LSAC LE+G E M N G+ L+ NMY+R N+ R+ R M DK
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRMELSNFVGNALI--NMYSRCGDINEARRVFRVMRDK 319
Query: 466 HLV 468
++
Sbjct: 320 DVI 322
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/515 (33%), Positives = 261/515 (50%), Gaps = 44/515 (8%)
Query: 29 FNEQGWYPLLKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYAC 85
NE + +L C + + QVH+ + K F D + GS LV +K G++ A
Sbjct: 150 LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM--YSKCGNVNDAQ 207
Query: 86 SIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG 145
+F ++ + +N++I + PD ++ AC+ L
Sbjct: 208 RVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLS 267
Query: 146 GVKEGIQIHGHVFKAG-VGDDIFVQNGLISMYGKCGAIKHACDVFE-------------- 190
+K G ++HG V K + +DI + N + MY KC IK A +F+
Sbjct: 268 AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMI 327
Query: 191 -----------------KMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEE 233
KM E++V SW+A+I + + L L + RE
Sbjct: 328 SGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHY 387
Query: 234 STLVSVLSACIHLGSPNLGR------CIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
S ++L AC L +LG HG ++ E ++ V SLIDMYVK GC+E+G
Sbjct: 388 S-FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
VF+ M E+ S+ MI G + +G+G EAL++F E+LE G PD + +GVLSAC HA
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
G V EG F +M + + P HY CMVDLLGRAG L EA +I+ MP++P+ V+W S
Sbjct: 507 GFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGS 566
Query: 408 LLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHL 467
LL+ACKVH N+ +G+ AEKL + P+N G Y++L+NMYA KW DV +R+ M + +
Sbjct: 567 LLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGV 626
Query: 468 VQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMI 502
+ PG S ++ + + F+ +D+S P I++++
Sbjct: 627 TKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLL 661
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 187/409 (45%), Gaps = 49/409 (11%)
Query: 40 RCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEY 99
+C S+E+ +QV + + + N V T L K G ++ A S+FR + E +
Sbjct: 67 KCGSLEDGRQVFDKMPQRNIYT-----WNSVVT-GLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 100 NTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFK 159
N+M+ G G + + + +L ACS L + +G+Q+H + K
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 160 AGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLML 219
+ D+++ + L+ MY KCG + A VF++M +++V SW+++I C E +
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI---TCFEQNGPAVEA 237
Query: 220 LG--DMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELN-VVVKTSLID 276
L M E +E TL SV+SAC L + +G+ +HG +++N N +++ + +D
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 277 MYVKSGCIEKGVCVFQN-------------------------------MAEKSRFSYTVM 305
MY K I++ +F + MAE++ S+ +
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM----- 360
I+G + +G EAL +F + E + P + +L AC+ ++ G+Q ++
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 361 QFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
+F+ + + ++D+ + G + E Y + + M ++ + V W +++
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 33/290 (11%)
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII-------- 204
+H V K+G ++IF+QN LI Y KCG+++ VF+KM ++++ +W++++
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 205 -----------------------GAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
A + + L M +EG + E + SVLS
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEG-FVLNEYSFASVLS 160
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS 301
AC L N G +H ++ ++ +V + ++L+DMY K G + VF M +++ S
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
+ +I+ +G EAL VF +LE + PD+V V+SAC+ + G + +
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
K++ + VD+ + ++EA + SMPI+ N + S++S
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISG 329
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/507 (32%), Positives = 267/507 (52%), Gaps = 44/507 (8%)
Query: 35 YPLL-KRCKSMEEFKQVH---AHVLKLGFFCDSFCGS---NLVATCALAKWGSMEYACSI 87
YP+L K C + H HVLKL S + ++ A+C G ME A +
Sbjct: 159 YPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASC-----GDMENARKV 213
Query: 88 FRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGV 147
F + +N +I G I G+ PD+ L+ +CS+LG +
Sbjct: 214 FDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDL 273
Query: 148 KEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEK---------------- 191
G + + +V + G+ I + N L+ M+ KCG I A +F+
Sbjct: 274 NRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGY 333
Query: 192 ---------------MDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTL 236
M+EK V W+A+IG A+ L L +M + + + +E T+
Sbjct: 334 ARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM-QTSNTKPDEITM 392
Query: 237 VSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE 296
+ LSAC LG+ ++G IH + + LNV + TSL+DMY K G I + + VF +
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 297 KSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
++ +YT +I GL++HG + A+ F+E+++ G+APD++ ++G+LSAC H G++ G
Sbjct: 453 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 512
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHL 416
F M+ + P ++HY MVDLLGRAG+L EA L++SMP++ + VW +LL C++H
Sbjct: 513 FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG 572
Query: 417 NLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMV 476
N+E+GE AA+KL L+P++ G Y++L MY A+ W D R RR M ++ + + PG S +
Sbjct: 573 NVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 632
Query: 477 EAERKVYKFVSQDRSQPEFDTIYNMIH 503
E V +F+ +D+S+PE + IY+ +H
Sbjct: 633 EVNGIVCEFIVRDKSRPESEKIYDRLH 659
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 187/413 (45%), Gaps = 37/413 (8%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
LL++CK + KQ+ A ++ G D F S L+A CAL++ ++Y+ I + IE P
Sbjct: 59 LLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNI 118
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGI---GPDNFIYPFLLKACSLLGGVKEGIQI 153
F +N IRG N G PD+F YP L K C+ L G I
Sbjct: 119 FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMI 178
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
GHV K + V N I M+ CG +++A VF++ + + SW+ +I +
Sbjct: 179 LGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA 238
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
+ + + M EG + ++ T++ ++S+C LG N G+ + + N + + + +
Sbjct: 239 EKAIYVYKLMESEG-VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNA 297
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHG-------------------- 313
L+DM+ K G I + +F N+ +++ S+T MISG + G
Sbjct: 298 LMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLW 357
Query: 314 -----------HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQF 362
G +AL +F E+ PD++ + LSACS G ++ G+ + ++
Sbjct: 358 NAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE- 416
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
++ + V +VD+ + G + EA + + + N + + +++ +H
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALH 468
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 275/527 (52%), Gaps = 46/527 (8%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
L +CKSM E ++H ++ LG + S ++ AL+ G ++YA ++ +P +
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN 73
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGH 156
+ +N +IRG + N G+ PD+ YPFL+K+ S L K G +H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 157 VFKAGVGDDIFVQNGLISMYG-------------------------------KCGAIKHA 185
V K+G+ D+F+ N LI MYG K G + A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
VF++M E+ V +WS++I + +++ L + M R G +A E T+VSV+ AC H
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVF--QNMAEKSRFSYT 303
LG+ N G+ +H +L L V+++TSLIDMY K G I VF ++ E +
Sbjct: 254 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 304 VMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE 363
+I GL+ HG E+LQ+F ++ E + PD++ ++ +L+ACSH GLV E FK+++ E
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK-E 372
Query: 364 HKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEI 423
+P +HY CMVD+L RAG++++A+ I MPIKP + +LL+ C H NLE+ E
Sbjct: 373 SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAET 432
Query: 424 AAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVY 483
+KL L P+N G Y+ LAN+YA ++ +R M K + + G S+++ + +
Sbjct: 433 VGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRH 492
Query: 484 KFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEK 530
+F++ D++ D IY + L+ G + + LDVD D++
Sbjct: 493 RFIAHDKTHFHSDKIYAV-------LQLTG-----AWMNLDVDYDDQ 527
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 252/471 (53%), Gaps = 10/471 (2%)
Query: 37 LLKRCKSME--EFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQI-EE 93
LLK +ME + K+VH KLGF D + GS LV + +K+ S+E A +F ++ +
Sbjct: 167 LLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTS--YSKFMSVEDAQKVFDELPDR 224
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
S +N ++ G I G+G +L A ++ G + G I
Sbjct: 225 DDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSI 284
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
HG K G G DI V N LI MYGK ++ A +FE MDE+ + +W++++ H
Sbjct: 285 HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDH 344
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL----LRNISELNVV 269
L L M G R + TL +VL C L S GR IHG + L N N
Sbjct: 345 DGTLALFERMLCSG-IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEF 403
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
+ SL+DMYVK G + VF +M K S+ +MI+G + G AL +FS + G
Sbjct: 404 IHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAG 463
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
+ PD++ +VG+L ACSH+G +NEG M+ + I PT HY C++D+LGRA L EA
Sbjct: 464 VKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEA 523
Query: 390 YGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARA 449
Y L S PI N VVWRS+LS+C++H N ++ +A ++L L P + G Y++++N+Y A
Sbjct: 524 YELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEA 583
Query: 450 HKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYN 500
K+ +V +R M +++ +TPG S + + V+ F + +++ PEF +I++
Sbjct: 584 GKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHD 634
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 185/399 (46%), Gaps = 21/399 (5%)
Query: 38 LKRCKSMEEF---KQVHAHVLKLGFFCDS-FCGSNLVATCALAKWGSMEYACSIFRQIEE 93
L+RC +++ +Q+H +++ GF DS G++LV AK G M A +F E
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNM--YAKCGLMRRAVLVFGG-SE 123
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSL--LGGVKEGI 151
F YN +I G V + GI PD + +P LLK L VK
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK--- 180
Query: 152 QIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKM-DEKSVASWSAIIGAHACA 210
++HG FK G D +V +GL++ Y K +++ A VF+++ D W+A++ ++
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 211 EMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVV 270
+ L++ M EG T+ SVLSA G + GR IHG+ ++ S ++VV
Sbjct: 241 FRFEDALLVFSKMREEG-VGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVV 299
Query: 271 KTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGL 330
+LIDMY KS +E+ +F+ M E+ F++ ++ G L +F +L G+
Sbjct: 300 SNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGI 359
Query: 331 APDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQH---YGCMVDLLGRAGMLR 387
PD V VL C + +G + M + + + ++D+ + G LR
Sbjct: 360 RPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLR 419
Query: 388 EAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAE 426
+A + SM +K + W +++ V GE+A +
Sbjct: 420 DARMVFDSMRVK-DSASWNIMINGYGVQ---SCGELALD 454
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 234 STLVSVLSACIHLGSPNLGRCIHGILLRN-ISELNVVVKTSLIDMYVKSGCIEKGVCVFQ 292
+T ++ L C G+ IHG ++R + + TSL++MY K G + + V VF
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG 120
Query: 293 NMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNE 352
+E+ F Y +ISG ++G +A++ + E+ G+ PD + +L L +
Sbjct: 121 G-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSD- 178
Query: 353 GLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
++ + F+ +V + + +A + +P + + V+W +L++
Sbjct: 179 -VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/482 (30%), Positives = 270/482 (56%), Gaps = 4/482 (0%)
Query: 36 PLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPG 95
P + + +++E KQ+H ++++ D F S L+ A K + A +IF Q
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID--AYFKCRGVSMAQNIFSQCNSVD 405
Query: 96 SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
+ MI G + I P+ +L +L +K G ++HG
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
+ K G + + +I MY KCG + A ++FE++ ++ + SW+++I A ++
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
+ + M G + ++ + LSAC +L S + G+ IHG ++++ +V +++LI
Sbjct: 526 AIDIFRQMGVSGICY-DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 276 DMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE-GLAPDD 334
DMY K G ++ + VF+ M EK+ S+ +I+ HG ++L +F E++E+ G+ PD
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
+ ++ ++S+C H G V+EG++ F++M ++ I+P +HY C+VDL GRAG L EAY +K
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 395 SMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWND 454
SMP P+ VW +LL AC++H N+E+ E+A+ KL L+P+N G Y++++N +A A +W
Sbjct: 705 SMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWES 764
Query: 455 VARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGY 514
V ++R M ++ + + PG+S +E ++ + FVS D + PE IY++++ + +L EGY
Sbjct: 765 VTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGY 824
Query: 515 KP 516
P
Sbjct: 825 IP 826
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 171/391 (43%), Gaps = 32/391 (8%)
Query: 37 LLKRCKSMEEFKQV---HAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
L+K C +++ FK + V LG C+ F S+L+ A ++G ++ +F ++ +
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIK--AYLEYGKIDVPSKLFDRVLQ 201
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+N M+ G I P+ + +L C+ + G+Q+
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
HG V +GV + ++N L+SMY KCG A +F M +W+ +I + + +
Sbjct: 262 HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLM 321
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
+ L +M G + T S+L + + + IH ++R+ L++ + ++
Sbjct: 322 EESLTFFYEMISSGVL-PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
LID Y K + +F +T MISG +G ++L++F +++ ++P+
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 334 DVVYVGVLSACS-----------HAGLVNEGLQCFKNMQFEHKIKPTVQHYGC-MVDLLG 381
++ V +L H ++ +G F+++ + GC ++D+
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKG--------FDNRC-----NIGCAVIDMYA 487
Query: 382 RAGMLREAYGLIKSMPIKPNDVVWRSLLSAC 412
+ G + AY + + + K + V W S+++ C
Sbjct: 488 KCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 151/361 (41%), Gaps = 23/361 (6%)
Query: 37 LLKRCKS---MEEFKQVHAHVLKLGFFCDSFCGSNLVATCAL----AKWGSMEYACSIFR 89
LL+ C + + + KQVHA ++ DS+ ++ A+ + G M Y + R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 90 QIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE 149
P +N++I V G+ PD +P L+KAC L K
Sbjct: 101 SSIRP----WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHAC 209
+ V G+ + FV + LI Y + G I +F+++ +K W+ ++ +A
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 210 AEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
+ M R T VLS C +LG +HG+++ + +
Sbjct: 217 CGALDSVIKGFSVM-RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
+K SL+ MY K G + +F+ M+ ++ MISG G E+L F E++ G
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
+ PD + + +L + S F+N+++ +I + + +D+ + ++ +A
Sbjct: 336 VLPDAITFSSLLPSVSK----------FENLEYCKQIHCYIMRHSISLDIFLTSALI-DA 384
Query: 390 Y 390
Y
Sbjct: 385 Y 385
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 165/508 (32%), Positives = 260/508 (51%), Gaps = 39/508 (7%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
M KQ+HAH L+ G D +L+ L ++ YA +F + +F YN +I
Sbjct: 1 MNGIKQLHAHCLRTG--VDE--TKDLLQRLLLIP--NLVYARKLFDHHQNSCTFLYNKLI 54
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
+ G+ P + + F+ A + + +H F++G
Sbjct: 55 QAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 164 DDIFVQNGLISMYGKCGAI-------------------------------KHACDVFEKM 192
D F LI+ Y K GA+ K A ++F+ M
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 193 DEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
K+V SW+ +I + + + L + M ++ + T+VSVL AC +LG +G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRF-SYTVMISGLSI 311
R + G N N+ V + I+MY K G I+ +F+ + + S+ MI L+
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 312 HGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQ 371
HG EAL +F+++L EG PD V +VG+L AC H G+V +G + FK+M+ HKI P ++
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 372 HYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFML 431
HYGCM+DLLGR G L+EAY LIK+MP+KP+ VVW +LL AC H N+EI EIA+E LF L
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Query: 432 NPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFS-MVEAERKVYKFVSQDR 490
P NPG+ ++++N+YA KW+ V R+R+ M + + + G+S VE V+KF +D+
Sbjct: 415 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 474
Query: 491 SQPEFDTIYNMIHQMEWQLEFEGYKPDT 518
S P IY ++ ++ +++ E + D+
Sbjct: 475 SHPRSYEIYQVLEEIFRRMKLEKSRFDS 502
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/493 (31%), Positives = 255/493 (51%), Gaps = 66/493 (13%)
Query: 36 PLL---KRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCAL-AKWGSMEYACSIFRQI 91
P+L +R KS+ E +Q HA +LK G F D+F S LVA A + ++ YA SI +I
Sbjct: 41 PILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRI 100
Query: 92 EEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGI 151
P F +N++IR + + PD + + F+LKAC+ G +EG
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 152 QIHGHVFKAGVGDDIFVQNGLISMYGKC-------------------------------G 180
QIHG K+G+ D+FV+N L+++YG+ G
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 181 AIKHACDVFEKMDEKSVASWSAIIGAHACAEM---------------------------- 212
+ A +F++M+E++V SW+ +I +A A +
Sbjct: 221 LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAH 280
Query: 213 ---WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
+++ L + M + + + TLVSVLSAC LGS + G +H + ++ E+
Sbjct: 281 VGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGF 340
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
+ T+L+DMY K G I+K + VF+ +++ ++ +IS LS+HG G +AL++FSE++ EG
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG 400
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
P+ + ++GVLSAC+H G++++ + F+ M ++++PT++HYGCMVDLLGR G + EA
Sbjct: 401 FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEA 460
Query: 390 YGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARA 449
L+ +P ++ SLL ACK LE E A +L LN + Y ++N+YA
Sbjct: 461 EELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASD 520
Query: 450 HKWNDVARIRREM 462
+W V RR M
Sbjct: 521 GRWEKVIDGRRNM 533
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 268/542 (49%), Gaps = 47/542 (8%)
Query: 2 TRTTVLSQTHLLSLPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFC 61
TR T S H PS S ++ + Q ++ + + + KQV + ++ G
Sbjct: 3 TRVTQFSYLHA---PS-----SHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSH 54
Query: 62 DSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXX 121
F L+ C L + ++ YA IF + P + Y ++ S +
Sbjct: 55 SHFLCFKLLRFCTL-RLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFF 113
Query: 122 XXXXGIG---PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLI----- 173
P++FIYP +LK+ L +H H+FK+G + VQ L+
Sbjct: 114 RLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYAS 173
Query: 174 ---------------------------SMYGKCGAIKHACDVFEKMDEKSVASWSAIIGA 206
S Y + G I +A +FE M E+ V SW+AI+ A
Sbjct: 174 SVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAA 233
Query: 207 HACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISEL 266
++ + + L M E R E T+V VLSAC G+ L + IH R
Sbjct: 234 CTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSS 293
Query: 267 NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEIL 326
+V V SL+D+Y K G +E+ VF+ ++KS ++ MI+ ++HG EA+ VF E++
Sbjct: 294 DVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM 353
Query: 327 E---EGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRA 383
+ + PD + ++G+L+AC+H GLV++G F M I+P ++HYGC++DLLGRA
Sbjct: 354 KLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRA 413
Query: 384 GMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLA 443
G EA ++ +M +K ++ +W SLL+ACK+H +L++ E+A + L LNPNN G ++A
Sbjct: 414 GRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMA 473
Query: 444 NMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIH 503
N+Y W + R R+ + ++ + PG+S +E + +V++F S D+S PE + IY ++
Sbjct: 474 NLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILD 533
Query: 504 QM 505
+
Sbjct: 534 SL 535
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 294/595 (49%), Gaps = 28/595 (4%)
Query: 30 NEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEY-ACSIF 88
NE +L C+ E KQVH LKLG C + + +++ G+ Y A ++F
Sbjct: 160 NEFTLSSVLTSCR-YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVF 218
Query: 89 RQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVK 148
I+ +N+MI G+G D LL CS L
Sbjct: 219 EAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDR---ATLLNICSSLYKSS 275
Query: 149 EGI---------QIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHAC-DVFEKMDE-KSV 197
+ + Q+H K+G+ V LI +Y + C +F +M + +
Sbjct: 276 DLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDI 335
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
+W+ II A A + + + L G + R+ + T SVL AC L + IH
Sbjct: 336 VAWNGIITAFAVYDP-ERAIHLFGQL-RQEKLSPDWYTFSSVLKACAGLVTARHALSIHA 393
Query: 258 ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAE 317
+++ + V+ SLI Y K G ++ + VF +M + S+ M+ S+HG
Sbjct: 394 QVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDS 453
Query: 318 ALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMV 377
L VF ++ + PD ++ +LSACSHAG V EGL+ F++M + + P + HY C++
Sbjct: 454 ILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVI 510
Query: 378 DLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLF-MLNPNNP 436
D+L RA EA +IK MP+ P+ VVW +LL +C+ H N +G++AA+KL ++ P N
Sbjct: 511 DMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNS 570
Query: 437 GDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFD 496
Y+ ++N+Y +N+ +EM + + P S E KV++F S R +P+ +
Sbjct: 571 MSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKE 630
Query: 497 TIYNMIHQMEWQLEFEGYKPDT-SQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSP 555
+Y + ++ L+ GY P+ S DE+++ + L HHS+KLA+AF ++ + S
Sbjct: 631 AVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSD 690
Query: 556 -----MRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
++I +N R+C DCH + K SK+ +EI +RD RFHHFKD +CSC DYW
Sbjct: 691 CGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 11/215 (5%)
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGV--GDDIFVQNGLISMYGKCGAIKHACDVFEK 191
Y L +AC+ + +GI +H H+ ++ + N LI+MY KCG I +A VF+
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 192 MDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL 251
M E++V SW+A+I + A + L M H E TL SVL++C + P
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSML--SHCFPNEFTLSSVLTSCRY--EP-- 175
Query: 252 GRCIHGILLRNISELNVVVKTSLIDMYVK---SGCIEKGVCVFQNMAEKSRFSYTVMISG 308
G+ +HG+ L+ ++ V ++I MY + + VF+ + K+ ++ MI+
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 309 LSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
G +A+ VF + +G+ D + + S+
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 271/537 (50%), Gaps = 5/537 (0%)
Query: 74 ALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFI 133
A +G ++ A IF + E + YN ++ G + G+ +F
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
+ AC L+ K QIHG K G + +Q L+ M +C + A ++F++
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Query: 194 EK--SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL 251
S + ++IIG +A + + + L E +E +L +L+ C LG +
Sbjct: 480 SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREM 539
Query: 252 GRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSI 311
G IH L+ ++ + SLI MY K + + +F M E S+ +IS +
Sbjct: 540 GYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYIL 599
Query: 312 HGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC--SHAGLVNEGLQCFKNMQFEHKIKPT 369
+G EAL ++S + E+ + PD + V+SA + + ++ F +M+ + I+PT
Sbjct: 600 QRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPT 659
Query: 370 VQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLF 429
+HY V +LG G+L EA I SMP++P V R+LL +C++H N + + A+ +
Sbjct: 660 TEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLIL 719
Query: 430 MLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQD 489
P P +Y++ +N+Y+ + W+ IR EM ++ + P S + E K++ F ++D
Sbjct: 720 STKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARD 779
Query: 490 RSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIH 549
S P+ IY + + + GY+P+T VL +VDE K+ L HHS KLA+ + ++
Sbjct: 780 TSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILS 839
Query: 550 T-SEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+ + G P+R+ +N+ LC DCH + K+IS + +REI +RD FHHF +G CSC+D W
Sbjct: 840 SNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 163/360 (45%), Gaps = 47/360 (13%)
Query: 32 QGWYPLLK---RCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIF 88
G++ LL+ + +E K VHA LKL + G+ L++T K G A +F
Sbjct: 81 DGFFYLLRLSAQYHDVEVTKAVHASFLKLRE-EKTRLGNALIST--YLKLGFPREAILVF 137
Query: 89 RQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXG-IGPDNFIYPFLLKACSLLGGV 147
+ P Y +I G + G + P+ + + +L AC +
Sbjct: 138 VSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRF 197
Query: 148 KEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACD----VFEKMDEKSVASWSAI 203
GIQIHG + K+G + +FV N L+S+Y K +CD +F+++ ++ VASW+ +
Sbjct: 198 SLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSG--SSCDDVLKLFDEIPQRDVASWNTV 255
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN- 262
+ + H+ L +M+R + + TL ++LS+C GR +HG +R
Sbjct: 256 VSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIG 315
Query: 263 -ISELNV-----------------------------VVKTSLIDMYVKSGCIEKGVCVFQ 292
+ EL+V V T +I Y+ G ++ V +F
Sbjct: 316 LMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFA 375
Query: 293 NMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNE 352
N+ EK+ +Y +++G +GHG +AL++F+++L+ G+ D + AC GLV+E
Sbjct: 376 NVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSE 432
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
D F Y LL+ + V+ +H K + + N LIS Y K G + A VF
Sbjct: 81 DGFFY--LLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVF 137
Query: 190 EKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSP 249
+ +V S++A+I + + + L + M + G + E T V++L+AC+ +
Sbjct: 138 VSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRF 197
Query: 250 NLGRCIHGILLRNISELNVVVKTSLIDMYVK---SGCIEKGVCVFQNMAEKSRFSYTVMI 306
+LG IHG+++++ +V V SL+ +Y K S C + + +F + ++ S+ ++
Sbjct: 198 SLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC-DDVLKLFDEIPQRDVASWNTVV 256
Query: 307 SGLSIHGHGAEALQVFSEILE-EGLAPDDVVYVGVLSACSHAGLVNEG 353
S L G +A +F E+ EG D +LS+C+ + ++ G
Sbjct: 257 SSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRG 304
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
+ +H L+ + E + +LI Y+K G + + VF +++ + SYT +ISG S
Sbjct: 100 KAVHASFLK-LREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 313 GHGAEALQVFSEILEEGLA-PDDVVYVGVLSACSHAGLVNEGLQ 355
EAL+VF + + GL P++ +V +L+AC + G+Q
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ 202
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/506 (31%), Positives = 262/506 (51%), Gaps = 14/506 (2%)
Query: 27 TRFNEQGWYPLLKRCKSMEEFKQ---VHAHVLKLGFFCDSFCGS---NLVATCALAKWGS 80
T NE +LK C++M+ VH V+KLG + + N+ ATC++ +
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV----T 162
Query: 81 MEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKA 140
ME AC IFR I+ + T+I G + + + ++A
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRA 222
Query: 141 CSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASW 200
+ + V G QIH V K G ++ V N ++ +Y +CG + A F +M++K + +W
Sbjct: 223 SASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITW 282
Query: 201 SAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILL 260
+ +I ++ + L++ +G + T S+++AC ++ + N G+ +HG +
Sbjct: 283 NTLISELERSDS-SEALLMFQRFESQG-FVPNCYTFTSLVAACANIAALNCGQQLHGRIF 340
Query: 261 RNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRF-SYTVMISGLSIHGHGAEAL 319
R NV + +LIDMY K G I VF + ++ S+T M+ G HG+GAEA+
Sbjct: 341 RRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAV 400
Query: 320 QVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDL 379
++F +++ G+ PD +V++ VLSAC HAGLV +GL+ F M+ E+ I P Y C+VDL
Sbjct: 401 ELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDL 460
Query: 380 LGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHL-NLEIGEIAAEKLFMLNPNNPGD 438
LGRAG + EAY L++ MP KP++ W ++L ACK H N I +AA K+ L P G
Sbjct: 461 LGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGT 520
Query: 439 YLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTI 498
Y++L+ +YA KW D AR+R+ M + G S + E +V+ F D+ P ++
Sbjct: 521 YVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSV 580
Query: 499 YNMIHQMEWQLEFEGYKPDTSQVLLD 524
Y+++ + + GY P+ ++ D
Sbjct: 581 YSVLGLLIEETREAGYVPELDSLVND 606
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 147/339 (43%), Gaps = 18/339 (5%)
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLL 138
G +E A S+F ++ + + MI G S G P+ F +L
Sbjct: 59 GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVL 118
Query: 139 KACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCG-AIKHACDVFEKMDEKSV 197
K+C + + G +HG V K G+ ++V N +++MY C ++ AC +F + K+
Sbjct: 119 KSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKND 178
Query: 198 ASWSAIIGAH-------ACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPN 250
+W+ +I +M+ Q L+ +++ + + A + S
Sbjct: 179 VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVT--------PYCITIAVRASASIDSVT 230
Query: 251 LGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLS 310
G+ IH +++ + N+ V S++D+Y + G + + F M +K ++ +IS L
Sbjct: 231 TGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE 290
Query: 311 IHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTV 370
+EAL +F +G P+ + +++AC++ +N G Q + F V
Sbjct: 291 -RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI-FRRGFNKNV 348
Query: 371 QHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
+ ++D+ + G + ++ + + + N V W S++
Sbjct: 349 ELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 165/577 (28%), Positives = 294/577 (50%), Gaps = 19/577 (3%)
Query: 29 FNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIF 88
F L +S++ KQ+H+ +K+GF + G+ LV +E A +F
Sbjct: 326 FTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVE-ASRVF 384
Query: 89 RQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVK 148
+ P + T+I G V + P+ +L+ACS L V+
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVR 444
Query: 149 EGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
++IH ++ + V ++ V N L+ Y + +A +V M + ++++++
Sbjct: 445 RVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFN 504
Query: 209 CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNV 268
L ++ M +G R ++ +L +SA +LG+ G+ +H +++
Sbjct: 505 ELGKHEMALSVINYMYGDG-IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA 563
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
V SL+DMY K G +E VF+ +A S+ ++SGL+ +G + AL F E+ +
Sbjct: 564 SVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMK 623
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
PD V ++ +LSACS+ L + GL+ F+ M+ + I+P V+HY +V +LGRAG L E
Sbjct: 624 ETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEE 683
Query: 389 AYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYAR 448
A G++++M +KPN +++++LL AC+ NL +GE A K L P++P Y++LA++Y
Sbjct: 684 ATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDE 743
Query: 449 AHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQ-PEFDTIYNMIHQMEW 507
+ K + R M +K L + G S VE + KV+ FVS+D ++ + + IY I ++
Sbjct: 744 SGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKE 803
Query: 508 QLEFEG--YKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLC 565
+++ G Y+ + E HS K A+ + I+ S +P+ + +N LC
Sbjct: 804 EIKRFGSPYRGN--------------ENASFHSAKQAVVYGFIYASPEAPVHVVKNKILC 849
Query: 566 SDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCK 602
DCH + ++++ +++ITVRD + H FK+G CSCK
Sbjct: 850 KDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 201/469 (42%), Gaps = 53/469 (11%)
Query: 37 LLKRCKSMEEFKQVHAH--VLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEP 94
+L C+S +H H V+K G + +NL++ K + A +F ++
Sbjct: 30 ILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSL--YLKTDGIWNARKLFDEMSHR 87
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIH 154
F + MI G P+ F + ++++C+ L + G ++H
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
G V K G + V + L +Y KCG K AC++F + SW+ +I + A W
Sbjct: 148 GSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR 207
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH-GILLRNISELNVVVKTS 273
+ L +M + G E T V +L A LG G+ IH I++R I LNVV+KTS
Sbjct: 208 EALQFYSEMVKAG-VPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGI-PLNVVLKTS 264
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
L+D Y + +E V V + E+ F +T ++SG + EA+ F E+ GL P+
Sbjct: 265 LVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPN 324
Query: 334 DVVYVGVLSACSHA--------------------------GLVNEGLQCF-----KNMQF 362
+ Y +LS CS LV+ ++C + F
Sbjct: 325 NFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF 384
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSAC-KVHLNL 418
+ P V + ++ L G +++ +GL+ M ++PN V +L AC K+
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVR 444
Query: 419 EIGEIAAEKLFMLNPNNPGDYLV---LANMYARAHK----WNDVARIRR 460
+ EI A ++L + G+ +V L + YA + K WN + ++R
Sbjct: 445 RVLEIHA---YLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKR 490
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 258/482 (53%), Gaps = 19/482 (3%)
Query: 29 FNEQGWYP-LLKRCKS---MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYA 84
F + YP LLK C + K +H H+ KLG D + + L+ + + A
Sbjct: 114 FADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDA 173
Query: 85 CSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLL 144
+F ++ E + +N+M+ G V D L+ ++L
Sbjct: 174 MKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF----------DEMPQRDLISWNTML 223
Query: 145 GGVKEGIQIHG--HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD--EKSVASW 200
G ++ +F+ + + ++ Y K G ++ A +F+KM K+V +W
Sbjct: 224 DGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTW 283
Query: 201 SAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILL 260
+ II +A + + L+ M G + + + ++S+L+AC G +LG IH IL
Sbjct: 284 TIIIAGYAEKGLLKEADRLVDQMVASG-LKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 261 RNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQ 320
R+ N V +L+DMY K G ++K VF ++ +K S+ M+ GL +HGHG EA++
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIE 402
Query: 321 VFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLL 380
+FS + EG+ PD V ++ VL +C+HAGL++EG+ F +M+ + + P V+HYGC+VDLL
Sbjct: 403 LFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLL 462
Query: 381 GRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYL 440
GR G L+EA ++++MP++PN V+W +LL AC++H ++I + + L L+P +PG+Y
Sbjct: 463 GRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYS 522
Query: 441 VLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYN 500
+L+N+YA A W VA IR +M + + G S VE E +++F D+S P+ D IY
Sbjct: 523 LLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQ 582
Query: 501 MI 502
M+
Sbjct: 583 ML 584
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 188/408 (46%), Gaps = 23/408 (5%)
Query: 14 SLPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATC 73
SLP P F E+ L +C ++ + KQ+HA +++ D L++
Sbjct: 4 SLPVRAPSWVSSRRIFEER--LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISAL 61
Query: 74 ALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFI 133
+L + ++ A +F Q++EP N++IR + G+ DNF
Sbjct: 62 SLCRQTNL--AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFT 119
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCG--AIKHACDVFEK 191
YPFLLKACS + +H H+ K G+ DI+V N LI Y +CG ++ A +FEK
Sbjct: 120 YPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEK 179
Query: 192 MDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG--HWRAEESTLVSVLSACIHLGSP 249
M E+ SW++++G A L +M + W +T++ + C +
Sbjct: 180 MSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISW----NTMLDGYARCREMSKA 235
Query: 250 NLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNM--AEKSRFSYTVMIS 307
L + E N V ++++ Y K+G +E +F M K+ ++T++I+
Sbjct: 236 FE-------LFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIA 288
Query: 308 GLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIK 367
G + G EA ++ +++ GL D + +L+AC+ +GL++ G++ ++ +
Sbjct: 289 GYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK-RSNLG 347
Query: 368 PTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
++D+ + G L++A+ + +P K + V W ++L VH
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVH 394
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 209/366 (57%), Gaps = 2/366 (0%)
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV 197
LKACSL+G ++ G +IHG + V+N LI+MY KC ++HA VF + +E S+
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH- 256
+W++II +A + LL +M G ++ TL S+L C + + G+ H
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAG-FQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
IL R + ++ SL+D+Y KSG I V M+++ +YT +I G G G
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGG 465
Query: 317 EALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCM 376
AL +F E+ G+ PD V V VLSACSH+ LV+EG + F MQ E+ I+P +QH+ CM
Sbjct: 466 VALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525
Query: 377 VDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNP 436
VDL GRAG L +A +I +MP KP+ W +LL+AC +H N +IG+ AAEKL + P NP
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENP 585
Query: 437 GDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFD 496
G Y+++ANMYA A W+ +A +R M D + + PG + ++ + F D S PE
Sbjct: 586 GYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEAC 645
Query: 497 TIYNMI 502
Y ++
Sbjct: 646 NTYPLL 651
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 152/373 (40%), Gaps = 72/373 (19%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
GI PD F YP +LKAC V G +HG + + ++V N LISMY + + A
Sbjct: 139 GIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIA 198
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLML-------------------------- 219
+F++M E+ SW+A+I +A MW + L
Sbjct: 199 RRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQT 258
Query: 220 ------LGDMSREGHWRA--EESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVK 271
LG +SR ++ + ++ L AC +G+ LG+ IHG+ + + + V+
Sbjct: 259 GNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVR 318
Query: 272 TSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLA 331
+LI MY K + + VF+ E S ++ +ISG + EA + E+L G
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 332 PDDVVYVGVLSACSHAGLVNEGLQ---------CFKNMQF-----------EHKIKPTVQ 371
P+ + +L C+ + G + CFK+ KI Q
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 372 -----------HYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSACKVHLN 417
Y ++D G G A L K M IKP+ V ++LSAC H
Sbjct: 439 VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACS-HSK 497
Query: 418 LEIGEIAAEKLFM 430
L + E E+LFM
Sbjct: 498 L-VHE--GERLFM 507
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 3/258 (1%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
LL AC + G+Q+H H +GV + L++ Y A + E D
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
W+ +I ++A E++ + + M +G R + T SVL AC GR +H
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKG-IRPDAFTYPSVLKACGETLDVAFGRVVH 167
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
G + + + ++ V +LI MY + + +F M E+ S+ +I+ + G +
Sbjct: 168 GSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 317 EALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ-FEHKIKPTVQHYGC 375
EA ++F ++ G+ + + + C G L M+ F + P G
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 376 MV-DLLGRAGMLREAYGL 392
L+G + +E +GL
Sbjct: 288 KACSLIGAIRLGKEIHGL 305
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 240/468 (51%), Gaps = 4/468 (0%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+E K++H +K GF D + S LV K +E A +F+++ +N+MI
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDM--YGKCDCLEVAREVFQKMPRKSLVAWNSMI 281
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
+G V+ + G P +L ACS + G IHG+V ++ V
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
DI+V LI +Y KCG A VF K + SW+ +I ++ W + + + M
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC 283
G + + T SVL AC L + G+ IH + + E + ++ ++L+DMY K G
Sbjct: 402 VSVG-VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
++ +F ++ +K S+TVMIS HG EAL F E+ + GL PD V + VLSA
Sbjct: 461 EKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA 520
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP-IKPND 402
C HAGL++EGL+ F M+ ++ I+P ++HY CM+D+LGRAG L EAY +I+ P N
Sbjct: 521 CGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNA 580
Query: 403 VVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREM 462
+ +L SAC +HL +G+ A L P++ Y+VL N+YA W+ R+R +M
Sbjct: 581 ELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKM 640
Query: 463 ADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLE 510
+ L + PG S +E KV F ++DRS + +Y + + +E
Sbjct: 641 KEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 179/368 (48%), Gaps = 5/368 (1%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
+ +H V+K G+ CD S+LV AK+ E + +F ++ E +NT+I
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGM--YAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
G P++ + ACS L ++ G +IH K G D +
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
V + L+ MYGKC ++ A +VF+KM KS+ +W+++I + C+ +L M EG
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
R ++TL S+L AC + G+ IHG ++R++ ++ V SLID+Y K G
Sbjct: 305 T-RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA 363
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
VF + S+ VMIS G+ +A++V+ +++ G+ PD V + VL ACS
Sbjct: 364 ETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
+ +G Q ++ E +++ ++D+ + G +EA+ + S+P K + V W
Sbjct: 424 AALEKGKQIHLSIS-ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTV 481
Query: 408 LLSACKVH 415
++SA H
Sbjct: 482 MISAYGSH 489
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 194/487 (39%), Gaps = 73/487 (14%)
Query: 37 LLKRC----KSMEEFKQVHAHVLKLGFFCDS-FCGS--NLVATC-----ALAKWGSMEYA 84
LL+ C KS+ K VH +L LG D C S N+ TC A + + +
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 85 CSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLL 144
++ + N+M + + PD+F +P ++KA L
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICV--------PDSFTFPNVIKAYGAL 120
Query: 145 GGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII 204
G G IH V K+G D+ V + L+ MY K +++ VF++M E+ VASW+ +I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 205 GAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS 264
+ + L L G M G + +L +SAC L G+ IH ++
Sbjct: 181 SCFYQSGEAEKALELFGRMESSG-FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF 239
Query: 265 ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSE 324
EL+ V ++L+DMY K C+E VFQ M KS ++ MI G G +++ +
Sbjct: 240 ELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNR 299
Query: 325 ILEEGLAPDDVVYVGVLSACSHA--------------------------GLVNEGLQC-- 356
++ EG P +L ACS + L++ +C
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 357 --FKNMQFEHKIKPTVQHYGCMVD---LLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
F K + + M+ +G E Y + S+ +KP+ V + S+L A
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 412 C----------KVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRRE 461
C ++HL++ + ++L + L +MY++ + RI
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLL---------SALLDMYSKCGNEKEAFRIFNS 470
Query: 462 MADKHLV 468
+ K +V
Sbjct: 471 IPKKDVV 477
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/525 (28%), Positives = 260/525 (49%), Gaps = 69/525 (13%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
L + CK++ KQ+HA ++ G + L+ + +L+ G+++YA +F +I +P
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGH 156
N ++RG+ M G+ PD + + F+LKACS L G HG
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 157 V-----------------FKAGVGD----------------------------------- 164
V F A GD
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 165 ----------DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
D N +I+ KC + A ++F++ EK V +W+A+I +
Sbjct: 198 MRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV----- 269
+ L + +M G + T++S+LSAC LG G+ +H +L S + +
Sbjct: 258 EALGIFKEMRDAGE-HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTP 316
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
+ +LIDMY K G I++ + VF+ + ++ ++ +I GL++H H ++++F E+
Sbjct: 317 IWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLK 375
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
+ P++V ++GV+ ACSH+G V+EG + F M+ + I+P ++HYGCMVD+LGRAG L EA
Sbjct: 376 VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEA 435
Query: 390 YGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARA 449
+ ++SM I+PN +VWR+LL ACK++ N+E+G+ A EKL + + GDY++L+N+YA
Sbjct: 436 FMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYAST 495
Query: 450 HKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPE 494
+W+ V ++R+ D + + G S++E + S+PE
Sbjct: 496 GQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPE 540
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 257/472 (54%), Gaps = 4/472 (0%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
++HA+V+K G+ + G+ L+ +K Y F ++ + + T+I G
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDM--YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQ 464
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
+ D I +L+A S+L + +IH H+ + G+ D + +
Sbjct: 465 NDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-I 523
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGH 228
QN L+ +YGKC + +A VFE + K V SW+++I + A + + L M G
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG- 582
Query: 229 WRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGV 288
A+ L+ +LSA L + N GR IH LLR L + +++DMY G ++
Sbjct: 583 LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAK 642
Query: 289 CVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAG 348
VF + K YT MI+ +HG G A+++F ++ E ++PD + ++ +L ACSHAG
Sbjct: 643 AVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAG 702
Query: 349 LVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSL 408
L++EG K M+ E++++P +HY C+VD+LGRA + EA+ +K M +P VW +L
Sbjct: 703 LLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCAL 762
Query: 409 LSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLV 468
L+AC+ H EIGEIAA++L L P NPG+ ++++N++A +WNDV ++R +M +
Sbjct: 763 LAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGME 822
Query: 469 QTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQ 520
+ PG S +E + KV+KF ++D+S PE IY + ++ +LE E K + ++
Sbjct: 823 KHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREKGKRELAR 874
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 198/443 (44%), Gaps = 48/443 (10%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCAL----AKWGSMEYACSIFRQIEEPGSFEYNTMI 103
K++HA VLK S S L AL + G M A I RQ+ +N++I
Sbjct: 304 KEIHASVLK-----SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
+G V + G D ++ A L + G+++H +V K G
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
++ V N LI MY KC + F +M +K + SW+ +I +A + + L L D+
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC 283
+++ +E L S+L A L S + + IH +LR L+ V++ L+D+Y K
Sbjct: 479 AKK-RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK-GLLDTVIQNELVDVYGKCRN 536
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+ VF+++ K S+T MIS +++G+ +EA+++F ++E GL+ D V + +LSA
Sbjct: 537 MGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSA 596
Query: 344 CSHAGLVNEG--LQCF---KNMQFEHKIK-PTVQHYGCMVDL---------LGRAGMLR- 387
+ +N+G + C+ K E I V Y C DL + R G+L+
Sbjct: 597 AASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 656
Query: 388 ----EAYGL-------------IKSMPIKPNDVVWRSLLSACKVHLNLEIGE---IAAEK 427
AYG+ ++ + P+ + + +LL AC L+ G E
Sbjct: 657 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 716
Query: 428 LFMLNPNNPGDYLVLANMYARAH 450
+ L P P Y+ L +M RA+
Sbjct: 717 EYELEP-WPEHYVCLVDMLGRAN 738
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 158/347 (45%), Gaps = 7/347 (2%)
Query: 42 KSMEEFKQVHAHVLK-LGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYN 100
+++ + +Q+H+ + K F F LV K GS++ A +F ++ + +F +N
Sbjct: 94 RAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM--YGKCGSLDDAEKVFDEMPDRTAFAWN 151
Query: 101 TMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKA 160
TMI VS G+ +P LLKAC+ L ++ G ++H + K
Sbjct: 152 TMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKL 211
Query: 161 GVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVAS-WSAIIGAHACAEMWHQCLML 219
G F+ N L+SMY K + A +F+ EK A W++I+ +++ + + L L
Sbjct: 212 GYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLEL 271
Query: 220 LGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELN-VVVKTSLIDMY 278
+M G T+VS L+AC LG+ IH +L++ + + + V +LI MY
Sbjct: 272 FREMHMTGP-APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 330
Query: 279 VKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYV 338
+ G + + + + M ++ +I G + EAL+ FS+++ G D+V
Sbjct: 331 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390
Query: 339 GVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGM 385
+++A + G++ + +H +Q ++D+ + +
Sbjct: 391 SIIAASGRLSNLLAGMELHAYV-IKHGWDSNLQVGNTLIDMYSKCNL 436
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 4/278 (1%)
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDI-FVQNGLISMYGKCGAIKHACDVFEKM 192
+ ++L+ C V +G Q+H +FK ++ F+ L+ MYGKCG++ A VF++M
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 193 DEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
+++ +W+ +IGA+ L L +M EG S+ ++L AC L G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG-LSSFPALLKACAKLRDIRSG 201
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK-SRFSYTVMISGLSI 311
+H +L++ + +L+ MY K+ + +F EK + ++S S
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 312 HGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQ 371
G E L++F E+ G AP+ V L+AC G + ++ +
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 372 HYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
++ + R G + +A +++ M + V W SL+
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 10/215 (4%)
Query: 42 KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNT 101
KSM K++H H+L+ G D+ + LV K +M YA +F I+ + +
Sbjct: 501 KSMLIVKEIHCHILRKGLL-DTVIQNELVDV--YGKCRNMGYATRVFESIKGKDVVSWTS 557
Query: 102 MIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAG 161
MI + N G+ D+ +L A + L + +G +IH ++ + G
Sbjct: 558 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 162 VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII---GAHACAEMWHQCLM 218
+ + ++ MY CG ++ A VF++++ K + ++++I G H C + +
Sbjct: 618 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCG----KAAV 673
Query: 219 LLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
L D R + + + +++L AC H G + GR
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR 708
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 248/478 (51%), Gaps = 31/478 (6%)
Query: 37 LLKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
+LK C + K Q+H + K G + D F + L+ K G + + +F ++ +
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGL--YLKCGCLGLSRQMFDRMPK 184
Query: 94 PGSFEYNTMIRGNVS---IMNXXXXXXXXXXXXXXGIGPDNFIYPF-------------- 136
S YN+MI G V I++ I ++ I +
Sbjct: 185 RDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLF 244
Query: 137 -------LLKACSLLGG-VKEG-IQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACD 187
L+ S++ G VK G I+ +F D+ +I Y K G + HA
Sbjct: 245 ADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKT 304
Query: 188 VFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLG 247
+F++M + V ++++++ + + + L + DM +E H +++TLV VL A LG
Sbjct: 305 LFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 248 SPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMIS 307
+ +H ++ L + +LIDMY K G I+ + VF+ + KS + MI
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIG 424
Query: 308 GLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIK 367
GL+IHG G A + +I L PDD+ +VGVL+ACSH+GLV EGL CF+ M+ +HKI+
Sbjct: 425 GLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE 484
Query: 368 PTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEK 427
P +QHYGCMVD+L R+G + A LI+ MP++PNDV+WR+ L+AC H E GE+ A+
Sbjct: 485 PRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKH 544
Query: 428 LFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKF 485
L + NP Y++L+NMYA W DV R+R M ++ + + PG S +E + +V++F
Sbjct: 545 LILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 196/452 (43%), Gaps = 84/452 (18%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSM---------EY-ACS 86
+L CK+ ++ Q+H ++K G +S + +V A ++ + EY CS
Sbjct: 18 VLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCS 77
Query: 87 I-FRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG 145
F ++E+P F +N +I+ + + G+ D F +LKACS LG
Sbjct: 78 FSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLG 135
Query: 146 GVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIG 205
VK G+QIHG + K G+ D+F+QN LI +Y KCG + + +F++M ++ S++++I
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 206 AHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISE 265
+ +C +++ E L+S S + G I L ++ E
Sbjct: 196 GYV------KCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPE 249
Query: 266 LNVVVKTSLIDMYVKSGCIE--KGV-----------------------------CVFQNM 294
+++ S+ID YVK G IE KG+ +F M
Sbjct: 250 KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQM 309
Query: 295 AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG-LAPDDVVYVGVLSACSHAGLVNEG 353
+ +Y M++G + + EAL++FS++ +E L PDD V VL A + G +++
Sbjct: 310 PHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA 369
Query: 354 L--------------------------QC----FKNMQFEHKIKPTVQHYGCMVDLLGRA 383
+ +C + FE ++ H+ M+ L
Sbjct: 370 IDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIH 429
Query: 384 GMLREAYGL---IKSMPIKPNDVVWRSLLSAC 412
G+ A+ + I+ + +KP+D+ + +L+AC
Sbjct: 430 GLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 268/551 (48%), Gaps = 44/551 (7%)
Query: 30 NEQGWYPLLKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACS 86
N+ + +L C S+ + QVH ++K GF + + S L+ AK ME A +
Sbjct: 226 NQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDM--YAKCREMESARA 283
Query: 87 IFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGG 146
+ +E +N+MI G V + D+F P +L C L
Sbjct: 284 LLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSR 342
Query: 147 VKEGIQIHGH--VFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII 204
+ I H + K G V N L+ MY K G + A VFE M EK V SW+A++
Sbjct: 343 TEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALV 402
Query: 205 GAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS 264
+ + + L L +M R G ++ SVLSA L G+ +HG +++
Sbjct: 403 TGNTHNGSYDEALKLFCNM-RVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGF 461
Query: 265 ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSE 324
++ V SL+ MY K G +E +F +M + ++T +I G + +G
Sbjct: 462 PSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG----------- 510
Query: 325 ILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAG 384
L+ + + F +M+ + I P +HY CM+DL GR+G
Sbjct: 511 ------------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSG 546
Query: 385 MLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLAN 444
+ L+ M ++P+ VW+++L+A + H N+E GE AA+ L L PNN Y+ L+N
Sbjct: 547 DFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSN 606
Query: 445 MYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQ 504
MY+ A + ++ A +RR M +++ + PG S VE + KV+ F+S+DR P IY+ + +
Sbjct: 607 MYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDE 666
Query: 505 MEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRL 564
M ++ GY D S L D+D++ K L +HS+KLA+AF L+ G+P+RI +NLR+
Sbjct: 667 MMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRV 726
Query: 565 CSDCHTYTKFI 575
C DCH+ K +
Sbjct: 727 CGDCHSAMKLL 737
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 203/441 (46%), Gaps = 14/441 (3%)
Query: 30 NEQGWYPLLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACS 86
NE +L+ C S+ +Q+H H +K GF D + L+A A K + A
Sbjct: 124 NEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCK--RISEAEY 181
Query: 87 IFRQIE-EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG 145
+F +E E + + +M+ G G + + +P +L AC+ +
Sbjct: 182 LFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVS 241
Query: 146 GVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIG 205
+ G+Q+H + K+G +I+VQ+ LI MY KC ++ A + E M+ V SW+++I
Sbjct: 242 ACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIV 301
Query: 206 AHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL--GRCIHGILLRNI 263
+ + L + G M E + ++ T+ S+L+ C L + H ++++
Sbjct: 302 GCVRQGLIGEALSMFGRM-HERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTG 359
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
+V +L+DMY K G ++ + VF+ M EK S+T +++G + +G EAL++F
Sbjct: 360 YATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFC 419
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRA 383
+ G+ PD +V VLSA + L+ G Q N + ++ +V + +
Sbjct: 420 NMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNY-IKSGFPSSLSVNNSLVTMYTKC 478
Query: 384 GMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGD--YLV 441
G L +A + SM I+ + + W L+ + LE + + + + PG Y
Sbjct: 479 GSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYAC 537
Query: 442 LANMYARAHKWNDVARIRREM 462
+ +++ R+ + V ++ +M
Sbjct: 538 MIDLFGRSGDFVKVEQLLHQM 558
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 167/368 (45%), Gaps = 37/368 (10%)
Query: 84 ACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSL 143
A +FR + +N +I G + GI P+ + +L+ C+
Sbjct: 78 AEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTS 137
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD-EKSVASWSA 202
L + G QIHGH K G D+ V NGL++MY +C I A +FE M+ EK+ +W++
Sbjct: 138 LVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTS 197
Query: 203 IIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN 262
++ ++ + + D+ REG+ ++ + T SVL+AC + + +G +H ++++
Sbjct: 198 MLTGYSQNGFAFKAIECFRDLRREGN-QSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 263 ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVF 322
+ N+ V+++LIDMY K +E + + M S+ MI G G EAL +F
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMF 316
Query: 323 SEILEEGLAPDDVVYVGVL------------SACSHAGLVNEGLQCFKNMQFEHKIKPTV 370
+ E + DD +L ++ +H +V G +K +
Sbjct: 317 GRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN--------- 367
Query: 371 QHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLS----------ACKVHLNLEI 420
+VD+ + G++ A + + M I+ + + W +L++ A K+ N+ +
Sbjct: 368 ---NALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 421 GEIAAEKL 428
G I +K+
Sbjct: 424 GGITPDKI 431
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 247/489 (50%), Gaps = 17/489 (3%)
Query: 30 NEQGWYPLLKRCKSM---EEFKQVHAHVLKLGFFCDSFCGSNLVATCAL----AKWGSME 82
NE + LK C S+ + Q+H +K S N +A C+L A+ G +
Sbjct: 269 NEYIFGSSLKACSSLLRPDYGSQIHGLCIK------SELAGNAIAGCSLCDMYARCGFLN 322
Query: 83 YACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACS 142
A +F QIE P + +N +I G + G PD LL A +
Sbjct: 323 SARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 382
Query: 143 LLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKM-DEKSVASWS 201
+ +G+QIH ++ K G D+ V N L++MY C + ++FE + SW+
Sbjct: 383 KPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWN 442
Query: 202 AIIGAHACAEMWHQCLML-LGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILL 260
I+ A C + ML L + + T+ ++L C+ + S LG +H L
Sbjct: 443 TILTA--CLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL 500
Query: 261 RNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQ 320
+ +K LIDMY K G + + +F +M + S++ +I G + G G EAL
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALI 560
Query: 321 VFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLL 380
+F E+ G+ P+ V +VGVL+ACSH GLV EGL+ + MQ EH I PT +H C+VDLL
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 381 GRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYL 440
RAG L EA I M ++P+ VVW++LLSACK N+ + + AAE + ++P N ++
Sbjct: 621 ARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHV 680
Query: 441 VLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYN 500
+L +M+A + W + A +R M + + PG S +E E K++ F ++D PE D IY
Sbjct: 681 LLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYT 740
Query: 501 MIHQMEWQL 509
++H + Q+
Sbjct: 741 VLHNIWSQM 749
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 179/413 (43%), Gaps = 23/413 (5%)
Query: 42 KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNT 101
+S+ + +++H H+L D+ +++++ K GS+ A +F + E Y +
Sbjct: 81 RSLAQGRKIHDHILNSNCKYDTILNNHILSM--YGKCGSLRDAREVFDFMPERNLVSYTS 138
Query: 102 MIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAG 161
+I G + PD F + ++KAC+ V G Q+H V K
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 162 VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLG 221
+ QN LI+MY + + A VF + K + SWS+II + + L L
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 222 DMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKS 281
+M G + E S L AC L P+ G IHG+ +++ N + SL DMY +
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318
Query: 282 GCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVL 341
G + VF + S+ V+I+GL+ +G+ EA+ VFS++ G PD + +L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 342 SACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE---------AYGL 392
A + +++G+Q I + +G + DL +L + L
Sbjct: 379 CAQTKPMALSQGMQ----------IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 393 IKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANM 445
+ + V W ++L+AC H + + KL +++ P D++ + N+
Sbjct: 429 FEDFRNNADSVSWNTILTACLQH-EQPVEMLRLFKLMLVSECEP-DHITMGNL 479
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 138/284 (48%), Gaps = 14/284 (4%)
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
Y L+ ACS + +G +IH H+ + D + N ++SMYGKCG+++ A +VF+ M
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
E+++ S++++I ++ + + L M +E ++ S++ AC LG+
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQED-LVPDQFAFGSIIKACASSSDVGLGK 188
Query: 254 CIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHG 313
+H +++ S +++ + +LI MYV+ + VF + K S++ +I+G S G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 314 HGAEALQVFSEILEEGL-APDDVVYVGVLSACSHAGLVNEGLQ----CFKNMQFEHKIKP 368
EAL E+L G+ P++ ++ L ACS + G Q C K+ + I
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA- 307
Query: 369 TVQHYGC-MVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
GC + D+ R G L A + + +P+ W +++
Sbjct: 308 -----GCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAG 345
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Query: 235 TLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNM 294
T +S++ AC S GR IH +L + + + ++ ++ MY K G + VF M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 295 AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGL 354
E++ SYT +I+G S +G GAEA++++ ++L+E L PD + ++ AC+ + V G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 355 QCFKN-MQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
Q ++ E Q+ ++ + R + +A + +P+K + + W S+++
Sbjct: 189 QLHAQVIKLESSSHLIAQN--ALIAMYVRFNQMSDASRVFYGIPMK-DLISWSSIIAG 243
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 237/469 (50%), Gaps = 6/469 (1%)
Query: 38 LKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEP 94
LK C + + K +H HV+ GF + C +N +AT + G M+ +F + E
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVT-TLCVANSLAT-MYTECGEMQDGLCLFENMSER 273
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIH 154
+ ++I I + P+ + + AC+ L + G Q+H
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
+V G+ D + V N ++ MY CG + A +F+ M + + SWS IIG + A
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
+ M + G + + L S+LS ++ GR +H + L E N V++SL
Sbjct: 394 EGFKYFSWMRQSGT-KPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSL 452
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
I+MY K G I++ +F S T MI+G + HG EA+ +F + L+ G PD
Sbjct: 453 INMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDS 512
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
V ++ VL+AC+H+G ++ G F MQ + ++P +HYGCMVDLL RAG L +A +I
Sbjct: 513 VTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 395 SMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWND 454
M K +DVVW +LL ACK ++E G AAE++ L+P + LAN+Y+ +
Sbjct: 573 EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEE 632
Query: 455 VARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIH 503
A +R+ M K +++ PG+S ++ + V FVS DR P+ + IYN++
Sbjct: 633 AANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 184/454 (40%), Gaps = 40/454 (8%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
+ +HA+ +K + GS+L+ + G ++ +C +F ++ + + +I G V
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDM--YKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
D + + LKAC+ L VK G IH HV G +
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLC 245
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
V N L +MY +CG ++ +FE M E+ V SW+++I A+ + + M R
Sbjct: 246 VANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKM-RNS 304
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
E T S+ SAC L G +H +L ++ V S++ MY G +
Sbjct: 305 QVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSA 364
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
+FQ M + S++ +I G G G E + FS + + G P D +LS +
Sbjct: 365 SVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNM 424
Query: 348 GLVNEGLQ------CF------------------------KNMQFEHKIKPTVQHYGCMV 377
++ G Q CF +M F + + M+
Sbjct: 425 AVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMI 484
Query: 378 DLLGRAGMLREAYGLI-KSMPI--KPNDVVWRSLLSACKVHLNLEIG---EIAAEKLFML 431
+ G +EA L KS+ + +P+ V + S+L+AC L++G ++ + +
Sbjct: 485 NGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNM 544
Query: 432 NPNNPGDYLVLANMYARAHKWNDVARIRREMADK 465
P Y + ++ RA + +D ++ EM+ K
Sbjct: 545 RPAKE-HYGCMVDLLCRAGRLSDAEKMINEMSWK 577
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 130/284 (45%), Gaps = 3/284 (1%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
+ PD + +LKAC + G +H + K + ++V + L+ MY + G I +
Sbjct: 103 AVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
C VF +M ++ +W+AII A + + L +MSR ++ T L AC
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYTFAIALKACAG 221
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
L G+ IH ++ + V SL MY + G ++ G+C+F+NM+E+ S+T +
Sbjct: 222 LRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSL 281
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
I G +A++ F ++ + P++ + + SAC+ + G Q N+
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNV-LSLG 340
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
+ ++ M+ + G L A L + M + + + W +++
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTII 383
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 13/273 (4%)
Query: 180 GAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVS- 238
G ++ A VF+KM + SW++II + A + L+L M H + +++++S
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 239 VLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKS 298
VL AC + G +H ++ +V V +SL+DMY + G I+K VF M ++
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 299 RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFK 358
++T +I+GL G E L FSE+ D + L AC+ V G +
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYG-KAIH 232
Query: 359 NMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV-WRSLLSACKVHLN 417
T+ + + G +++ L ++M DVV W SL+ A K
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS--ERDVVSWTSLIVAYK---- 286
Query: 418 LEIG-EIAAEKLF--MLNPNNPGDYLVLANMYA 447
IG E+ A + F M N P + A+M++
Sbjct: 287 -RIGQEVKAVETFIKMRNSQVPPNEQTFASMFS 318
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 266/527 (50%), Gaps = 24/527 (4%)
Query: 1 MTRTTVLSQTHLLS---LPSTPPQCSELSTRFNEQGWYP-------LLKRCKSMEEF--- 47
M ++S T LLS + + EL T ++ G P +L C S+
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
QVHA+ +K DS+ ++L+ AK + A +F +N MI G
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDM--YAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427
Query: 108 SI---MNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGD 164
+ I P + LL+A + L + QIHG +FK G+
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM- 223
DIF + LI +Y C +K + VF++M K + W+++ + + L L ++
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 224 -SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSG 282
SRE R +E T ++++A +L S LG+ H LL+ E N + +L+DMY K G
Sbjct: 548 LSRE---RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604
Query: 283 CIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLS 342
E F + A + + +IS + HG G +ALQ+ +++ EG+ P+ + +VGVLS
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 343 ACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPND 402
ACSHAGLV +GL+ F+ M I+P +HY CMV LLGRAG L +A LI+ MP KP
Sbjct: 665 ACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA 723
Query: 403 VVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREM 462
+VWRSLLS C N+E+ E AAE + +P + G + +L+N+YA W + ++R M
Sbjct: 724 IVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM 783
Query: 463 ADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQL 509
+ +V+ PG S + ++V+ F+S+D+S + + IY ++ + Q+
Sbjct: 784 KVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 168/367 (45%), Gaps = 10/367 (2%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
Q+ + ++K GF D + G+ L+ K G+++YA +F + E + + TMI G V
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDF--YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
+ + PD +I +L ACS+L ++ G QIH H+ + G+ D +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGH 228
N LI Y KCG + A +F M K++ SW+ ++ + + + + L MS+ G
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG- 345
Query: 229 WRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGV 288
+ + S+L++C L + G +H ++ + V SLIDMY K C+
Sbjct: 346 LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDAR 405
Query: 289 CVFQNMAEKSRFSYTVMISGLSIHGHG---AEALQVFSEILEEGLAPDDVVYVGVLSACS 345
VF A + MI G S G EAL +F ++ + P + +V +L A
Sbjct: 406 KVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS- 464
Query: 346 HAGLVNEGL-QCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV 404
A L + GL + + F++ + + ++D+ L+++ + M +K + V+
Sbjct: 465 -ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVI 522
Query: 405 WRSLLSA 411
W S+ +
Sbjct: 523 WNSMFAG 529
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 166/387 (42%), Gaps = 32/387 (8%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+E KQ+HAH+L+ G D+ + L+ + K G + A +F + + T++
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDS--YVKCGRVIAAHKLFNGMPNKNIISWTTLL 322
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
G G+ PD + +L +C+ L + G Q+H + KA +G
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG 382
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII-GAHACAEMW--HQCLMLL 220
+D +V N LI MY KC + A VF+ V ++A+I G W H+ L +
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 221 GDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVK 280
DM R R T VS+L A L S L + IHG++ + L++ ++LID+Y
Sbjct: 443 RDM-RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSN 501
Query: 281 SGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGV 340
C++ VF M K + M +G EAL +F E+ PD+ + +
Sbjct: 502 CYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANM 561
Query: 341 LSACS-----------HAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
++A H L+ GL+C P + + ++D+ + G +A
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLEC----------NPYITN--ALLDMYAKCGSPEDA 609
Query: 390 YGLIKSMPIKPNDVV-WRSLLSACKVH 415
+ S + DVV W S++S+ H
Sbjct: 610 HKAFDSAASR--DVVCWNSVISSYANH 634
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 8/265 (3%)
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEM 212
+HG + G+ D ++ N LI++Y + G + +A VFEKM E+++ SWS ++ A +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRC----IHGILLRNISELNV 268
+ + L++ + R E L S + AC G GR + L+++ + +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
V T LID Y+K G I+ VF + EKS ++T MISG G +LQ+F +++E+
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
+ PD + VLSACS + G Q ++ + ++ ++D + G +
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHI-LRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 389 AYGLIKSMPIKPNDVVWRSLLSACK 413
A+ L MP K N + W +LLS K
Sbjct: 303 AHKLFNGMPNK-NIISWTTLLSGYK 326
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 142/310 (45%), Gaps = 8/310 (2%)
Query: 50 VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRG-NVS 108
VH ++ G D++ + L+ + A G M YA +F ++ E ++TM+ N
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRA--GGMVYARKVFEKMPERNLVSWSTMVSACNHH 123
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGI--QIHGHVFKAGVGDDI 166
+ P+ +I ++ACS L G + Q+ + K+G D+
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 167 FVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLML-LGDMSR 225
+V LI Y K G I +A VF+ + EKS +W+ +I C +M + L L
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS--GCVKMGRSYVSLQLFYQLM 241
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
E + + L +VLSAC L G+ IH +LR E++ + LID YVK G +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 286 KGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS 345
+F M K+ S+T ++SG + EA+++F+ + + GL PD +L++C+
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 346 HAGLVNEGLQ 355
+ G Q
Sbjct: 362 SLHALGFGTQ 371
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 244/462 (52%), Gaps = 3/462 (0%)
Query: 50 VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSI 109
VH V++ GF D N + C AK + + A ++F+ I E ++T+I V
Sbjct: 185 VHGFVIRRGFSND-LSLVNSLLNC-YAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN 242
Query: 110 MNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQ 169
G P+ +L+AC+ +++G + H + G+ ++ V
Sbjct: 243 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 302
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
L+ MY KC + + A VF ++ K V SW A+I M H+ + M E +
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
R + +V VL +C LG +C H +++ + N + SL+++Y + G +
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG-LAPDDVVYVGVLSACSHAG 348
VF +A K +T +I+G IHG G +AL+ F+ +++ + P++V ++ +LSACSHAG
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Query: 349 LVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSL 408
L++EGL+ FK M ++++ P ++HY +VDLLGR G L A + K MP P + +L
Sbjct: 483 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTL 542
Query: 409 LSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLV 468
L AC++H N E+ E A+KLF L N+ G Y++++N+Y +W +V ++R + + +
Sbjct: 543 LGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIK 602
Query: 469 QTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLE 510
+ S++E RKV++FV+ D PE + +Y ++ +++ ++
Sbjct: 603 KGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 153/285 (53%), Gaps = 5/285 (1%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFK-AGVGDDIFVQNGLISMYGKCGAIKHACD 187
PDNF P LKAC L V G IHG V K +G D++V + LI MY KCG + A
Sbjct: 58 PDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALR 117
Query: 188 VFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLG 247
+F+++++ + +WS+++ +Q + M + TL++++SAC L
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLS 177
Query: 248 SPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMIS 307
+ LGRC+HG ++R ++ + SL++ Y KS ++ V +F+ +AEK S++ +I+
Sbjct: 178 NSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 308 GLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIK 367
+G AEAL VF++++++G P+ + VL AC+ A + +G + + + ++
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIRKGLE 296
Query: 368 PTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV-WRSLLSA 411
V+ +VD+ + EAY + +P K DVV W +L+S
Sbjct: 297 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK--DVVSWVALISG 339
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 224/402 (55%), Gaps = 1/402 (0%)
Query: 127 IGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHAC 186
+ P++ Y L ACS + EG QIH ++K G+ ++ +++ L+ MY KCG+I+ A
Sbjct: 252 VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAW 311
Query: 187 DVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHL 246
+FE E S + I+ A + + M + G + + + +VL
Sbjct: 312 TIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG-VEIDANVVSAVLGVSFID 370
Query: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMI 306
S LG+ +H ++++ N V LI+MY K G + VF+ M +++ S+ MI
Sbjct: 371 NSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMI 430
Query: 307 SGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKI 366
+ + HGHG AL+++ E+ + P DV ++ +L ACSH GL+++G + M+ H I
Sbjct: 431 AAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490
Query: 367 KPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAE 426
+P +HY C++D+LGRAG+L+EA I S+P+KP+ +W++LL AC H + E+GE AAE
Sbjct: 491 EPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAE 550
Query: 427 KLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFV 486
+LF P++ ++++AN+Y+ KW + A+ + M + + G S +E E K + FV
Sbjct: 551 QLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFV 610
Query: 487 SQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDED 528
+D+ P+ + IY+++ + + EGY+PD +L +D
Sbjct: 611 VEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGDD 652
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 182/434 (41%), Gaps = 35/434 (8%)
Query: 32 QGWYPLLKRC------KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCAL----AKWGSM 81
+GW+P L C K+ E F+ V A + + + LV +L AK G +
Sbjct: 57 EGWFPHLGPCLHASIIKNPEFFEPVDADIHR----------NALVVWNSLLSLYAKCGKL 106
Query: 82 EYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKAC 141
A +F ++ N + G + G G D+ +L C
Sbjct: 107 VDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVC 165
Query: 142 SLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWS 201
IH +G +I V N LI+ Y KCG VF+ M ++V + +
Sbjct: 166 DTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLT 225
Query: 202 AIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL--GRCIHGIL 259
A+I E+ L L M R G T +S L+AC GS + G+ IH +L
Sbjct: 226 AVISGLIENELHEDGLRLFSLM-RRGLVHPNSVTYLSALAACS--GSQRIVEGQQIHALL 282
Query: 260 LRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEAL 319
+ E + ++++L+DMY K G IE +F++ E S TV++ GL+ +G EA+
Sbjct: 283 WKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAI 342
Query: 320 QVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDL 379
Q F +L+ G+ D V VL + G Q ++ + K ++++
Sbjct: 343 QFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQ-LHSLVIKRKFSGNTFVNNGLINM 401
Query: 380 LGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPN---NP 436
+ G L ++ + + MP K N V W S+++A H + +AA KL+ P
Sbjct: 402 YSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGH----GLAALKLYEEMTTLEVKP 456
Query: 437 GDYLVLANMYARAH 450
D L+ ++A +H
Sbjct: 457 TDVTFLSLLHACSH 470
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/457 (33%), Positives = 240/457 (52%), Gaps = 21/457 (4%)
Query: 37 LLKRCKSMEEFKQ---VHAHVLKLGFFCDSFCGSNLVATCALAKW---GSMEYACSIFRQ 90
+LK C + + + VH V+K GF + + V+TC L + G + Y +F
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMY-----VSTCLLHMYMCCGEVNYGLRVFED 167
Query: 91 IEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEG 150
I + + ++I G V+ G+ + I LL AC + G
Sbjct: 168 IPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG 227
Query: 151 IQIHGHV--------FKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSA 202
HG + F++ VG ++ + LI MY KCG ++ A +F+ M E+++ SW++
Sbjct: 228 KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNS 287
Query: 203 IIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN 262
II ++ + L + DM G ++ T +SV+ A + G LG+ IH + +
Sbjct: 288 IITGYSQNGDAEEALCMFLDMLDLG-IAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 263 ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVF 322
+ + +L++MY K+G E F+++ +K ++TV+I GL+ HGHG EAL +F
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 323 SEILEEGLA-PDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLG 381
+ E+G A PD + Y+GVL ACSH GLV EG + F M+ H ++PTV+HYGCMVD+L
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILS 466
Query: 382 RAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLV 441
RAG EA L+K+MP+KPN +W +LL+ C +H NLE+ + + G Y++
Sbjct: 467 RAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVL 526
Query: 442 LANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEA 478
L+N+YA+A +W DV IR M K + + G S VE
Sbjct: 527 LSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 218/486 (44%), Gaps = 58/486 (11%)
Query: 38 LKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCAL-AKWGSMEYACSIFRQIEEPGS 96
L+ C+S+ E Q+H ++K + S L+ C + ++ YA S+F I+ P
Sbjct: 13 LENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSV 72
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGH 156
+ +N+MIRG + N G PD F +P++LKACS L ++ G +HG
Sbjct: 73 YIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGF 132
Query: 157 VFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQC 216
V K G +++V L+ MY CG + + VFE + + +V +W ++I +
Sbjct: 133 VVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDA 192
Query: 217 LMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL--------LRNISELNV 268
+ +M G +A E+ +V +L AC G+ HG L ++ NV
Sbjct: 193 IEAFREMQSNGV-KANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNV 251
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
++ TSLIDMY K G + +F M E++ S+ +I+G S +G EAL +F ++L+
Sbjct: 252 ILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL 311
Query: 329 GLAPDDVVYVGVLSA-----CSHAG---------------------LVN---------EG 353
G+APD V ++ V+ A CS G LVN
Sbjct: 312 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 354 LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK----PNDVVWRSLL 409
+ F++++ + I TV G L G EA + + M K P+ + + +L
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIG-----LASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 426
Query: 410 SACKVHLNL-EIGEIAAEKLFMLNPNNPG--DYLVLANMYARAHKWNDVARIRREMADKH 466
AC H+ L E G+ ++ L+ P Y + ++ +RA ++ + R+ + M K
Sbjct: 427 YACS-HIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP 485
Query: 467 LVQTPG 472
V G
Sbjct: 486 NVNIWG 491
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/463 (31%), Positives = 244/463 (52%), Gaps = 13/463 (2%)
Query: 38 LKRCKS---MEEFKQVHAHVLKLGFFCDSF-CGS--NLVATCALAKWGSMEYACSIFRQI 91
+K C S +E+ + V + G+ D F C S NL C G M+ A +F ++
Sbjct: 123 IKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKC-----GKMDEAEVLFGKM 177
Query: 92 EEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGI 151
+ + TM+ G G G D + LL+A LG K G
Sbjct: 178 AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGR 237
Query: 152 QIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAE 211
+HG++++ G+ ++ V+ L+ MY K G I+ A VF +M K+ SW ++I A
Sbjct: 238 SVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNG 297
Query: 212 MWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVK 271
+ ++ + +M G ++ + TLV VL AC +GS GR +H +L+ L+ V
Sbjct: 298 LANKAFEAVVEMQSLG-FQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLDRVTA 355
Query: 272 TSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLA 331
T+L+DMY K G + +F+++ K + MIS IHG+G E + +F ++ E +
Sbjct: 356 TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIE 415
Query: 332 PDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYG 391
PD + +LSA SH+GLV +G F M ++KI+P+ +HY C++DLL RAG + EA
Sbjct: 416 PDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALD 475
Query: 392 LIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHK 451
+I S + +W +LLS C H NL +G+IAA K+ LNP++ G +++N +A A+K
Sbjct: 476 MINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANK 535
Query: 452 WNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPE 494
W +VA++R+ M + + + PG+S +E ++ F+ +D S E
Sbjct: 536 WKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHE 578
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 188/401 (46%), Gaps = 11/401 (2%)
Query: 49 QVHAHVLKLGFFCD-SFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
Q+HA V+ G + S +L+A+C + G + YA +F ++ + G YN+MI
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCG--RIGEISYARKVFDELPQRGVSVYNSMIVVYS 92
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE-GIQIHGHVFKAGVGDDI 166
N I PD+ + +KAC L G V E G + G +D+
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKAC-LSGLVLEKGEAVWCKAVDFGYKNDV 151
Query: 167 FVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSRE 226
FV + ++++Y KCG + A +F KM ++ V W+ ++ A A + + +M E
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 227 GHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEK 286
G R + ++ +L A LG +GR +HG L R +NVVV+TSL+DMY K G IE
Sbjct: 212 GFGR-DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 287 GVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSH 346
VF M K+ S+ +ISG + +G +A + E+ G PD V VGVL ACS
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQ 330
Query: 347 AGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWR 406
G + G + H + ++D+ + G L + + + + + + V W
Sbjct: 331 VGSLKTGRLVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVG-RKDLVCWN 387
Query: 407 SLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYA 447
+++S +H N + E+ + L M N D+ A++ +
Sbjct: 388 TMISCYGIHGNGQ--EVVSLFLKMTESNIEPDHATFASLLS 426
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 148/461 (32%), Positives = 243/461 (52%), Gaps = 5/461 (1%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRG-- 105
K VHA + K S S L+ +K G A +F+ +EE + ++I G
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTL--YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLC 450
Query: 106 NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDD 165
+ PD+ I + AC+ L ++ G+Q+HG + K G+ +
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 166 IFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSR 225
+FV + LI +Y KCG + A VF M +++ +W+++I ++ + + L M
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
+G + + ++ SVL A S G+ +HG LR + +K +LIDMYVK G +
Sbjct: 571 QGIF-PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 286 KGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS 345
+F+ M KS ++ +MI G HG AL +F E+ + G +PDDV ++ ++SAC+
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 346 HAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVW 405
H+G V EG F+ M+ ++ I+P ++HY MVDLLGRAG+L EAY IK+MPI+ + +W
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Query: 406 RSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADK 465
LLSA + H N+E+G ++AEKL + P Y+ L N+Y A N+ A++ M +K
Sbjct: 750 LCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
Query: 466 HLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQME 506
L + PG S +E + F S S P I+N++++++
Sbjct: 810 GLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLK 850
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 198/460 (43%), Gaps = 35/460 (7%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVA---TCALAKWGSMEYACSIFRQIEEPGSFEYNTMIR 104
+Q+H V+K+G D + ++L++ C + ++C + +++E +N M+
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI-----WNAMVA 346
Query: 105 GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGD 164
+ PD+F ++ CS+LG G +H +FK +
Sbjct: 347 AYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS 406
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM- 223
+++ L+++Y KCG A VF+ M+EK + +W ++I + + L + GDM
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC 283
+ + + + SV +AC L + G +HG +++ LNV V +SLID+Y K G
Sbjct: 467 DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGL 526
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
E + VF +M+ ++ ++ MIS S + ++ +F+ +L +G+ PD V VL A
Sbjct: 527 PEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV 403
S + +G + I ++D+ + G + A + K M K + +
Sbjct: 587 ISSTASLLKG-KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK-SLI 644
Query: 404 VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMA 463
W ++ H + I A LF M +DV + A
Sbjct: 645 TWNLMIYGYGSHGDC----ITALSLF-------------DEMKKAGESPDDVTFLSLISA 687
Query: 464 DKHLVQTPGFSMVEAERKVYKFVSQDRS-QPEFDTIYNMI 502
H GF VE + +++F+ QD +P + NM+
Sbjct: 688 CNH----SGF--VEEGKNIFEFMKQDYGIEPNMEHYANMV 721
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 171/391 (43%), Gaps = 19/391 (4%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
LLK C ++ K +H V+ LG+ D F ++LV K G ++YA +F +
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNM--YVKCGFLDYAVQVFDGWSQ 123
Query: 94 PGS-------FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGG 146
S +N+MI G G+ PD F ++ G
Sbjct: 124 SQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGN 183
Query: 147 VK--EGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS-VASWSAI 203
+ EG QIHG + + + D F++ LI MY K G A VF ++++KS V W+ +
Sbjct: 184 FRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVM 243
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNI 263
I + + L L +++ + ++ L AC + GR IH +++
Sbjct: 244 IVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
+ V TSL+ MY K G + + VF + +K + M++ + + +G AL +F
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRA 383
+ ++ + PD V+S CS GL N G + F+ I+ T ++ L +
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL-FKRPIQSTSTIESALLTLYSKC 421
Query: 384 GMLREAYGLIKSMPIKPNDVVWRSLLSA-CK 413
G +AY + KSM K + V W SL+S CK
Sbjct: 422 GCDPDAYLVFKSMEEK-DMVAWGSLISGLCK 451
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 45/243 (18%)
Query: 132 FIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEK 191
F +P LLKACS L + G IHG V G D F+ L++MY KCG + +A VF+
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 192 MDE-------KSVASWSAIIGAHACAEMWHQCL-------------------MLLGDMSR 225
+ + V W+++I + + + + +++ M +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
EG++R EE G+ IHG +LRN + + +KT+LIDMY K G
Sbjct: 181 EGNFRREE------------------GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 286 KGVCVFQNMAEKSRFS-YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC 344
VF + +KS + VMI G G +L ++ + + G L AC
Sbjct: 223 DAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGAC 282
Query: 345 SHA 347
S +
Sbjct: 283 SQS 285
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 255/489 (52%), Gaps = 16/489 (3%)
Query: 32 QGWYPLL---KRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLV-ATCALAKWGS-MEYACS 86
Q W L+ +RC ++++ K H+ + G +++ S L+ A L YA S
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 87 IFRQIEEPGSFEYNTMIR---GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSL 143
IF IE P SF Y+TMIR + I P + FL+ AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 144 LGGVKEGIQIHGHVFKAGVG-DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSA 202
G QIH V K GV D VQ G++ +Y + + A VF+++ + V W
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 203 IIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLR- 261
++ + + + L + +M +G +E ++ + L+AC +G+ G+ IH + +
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKG-LEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 262 NISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQV 321
+ E +V V T+L+DMY K GCIE V VF+ + ++ FS+ +I G + +G+ +A+
Sbjct: 248 SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTC 307
Query: 322 FSEI-LEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLL 380
+ E+G+ PD VV +GVL+AC+H G + EG +NM+ ++I P +HY C+VDL+
Sbjct: 308 LERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 381 GRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNN----P 436
RAG L +A LI+ MP+KP VW +LL+ C+ H N+E+GE+A + L L N
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEE 427
Query: 437 GDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFD 496
+ L+N+Y + + +++R + + + +TPG+S++E + V KFVS D S P
Sbjct: 428 AALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLL 487
Query: 497 TIYNMIHQM 505
I+ +IH +
Sbjct: 488 QIHTVIHLL 496
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 223/425 (52%), Gaps = 3/425 (0%)
Query: 88 FRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGV 147
FR F+ + G S++ G D + +++C L
Sbjct: 77 FRGQAISEDFDLSRTKNGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDF 136
Query: 148 KEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAH 207
+ G H K G D+++ + L+ +Y G +++A VFE+M E++V SW+A+I
Sbjct: 137 RTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGF 196
Query: 208 ACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELN 267
A CL L M R+ + T ++LSAC G+ GR +H L +
Sbjct: 197 AQEWRVDICLKLYSKM-RKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSY 255
Query: 268 VVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEIL- 326
+ + SLI MY K G ++ +F + K S+ MI+G + HG +A+++F ++
Sbjct: 256 LHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMP 315
Query: 327 EEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGML 386
+ G PD + Y+GVLS+C HAGLV EG + F N+ EH +KP + HY C+VDLLGR G+L
Sbjct: 316 KSGTKPDAITYLGVLSSCRHAGLVKEGRKFF-NLMAEHGLKPELNHYSCLVDLLGRFGLL 374
Query: 387 REAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMY 446
+EA LI++MP+KPN V+W SLL +C+VH ++ G AAE+ ML P+ ++ LAN+Y
Sbjct: 375 QEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLY 434
Query: 447 ARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQME 506
A W + A +R+ M DK L PG S +E V+ F ++D S I +++H +
Sbjct: 435 ASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLI 494
Query: 507 WQLEF 511
+EF
Sbjct: 495 DHMEF 499
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 5/272 (1%)
Query: 29 FNEQGWYPLLKRCKSMEEFKQ---VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYAC 85
F+ G ++ C +F+ H LK GF D + GS+LV G +E A
Sbjct: 118 FDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVL--YRDSGEVENAY 175
Query: 86 SIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG 145
+F ++ E + MI G P+++ + LL AC+ G
Sbjct: 176 KVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSG 235
Query: 146 GVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIG 205
+ +G +H G+ + + N LISMY KCG +K A +F++ K V SW+++I
Sbjct: 236 ALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIA 295
Query: 206 AHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISE 265
+A + Q + L M + + + T + VLS+C H G GR ++ + +
Sbjct: 296 GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLK 355
Query: 266 LNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK 297
+ + L+D+ + G +++ + + +NM K
Sbjct: 356 PELNHYSCLVDLLGRFGLLQEALELIENMPMK 387
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 200/344 (58%), Gaps = 3/344 (0%)
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
D+ N ++ Y G ++ VF+ M E++V SW+ +I +A + L M
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIH--GILLRNISELNVVVKTSLIDMYVKSG 282
EG ++T+ VLSAC LG+ + G+ +H G L ++++V VK +LIDMY K G
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETL-GYNKVDVNVKNALIDMYGKCG 238
Query: 283 CIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLS 342
IE + VF+ + + S+ MI+GL+ HGHG EAL +F E+ G++PD V +VGVL
Sbjct: 239 AIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLC 298
Query: 343 ACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPND 402
AC H GLV +GL F +M + I P ++H GC+VDLL RAG L +A I MP+K +
Sbjct: 299 ACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADA 358
Query: 403 VVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREM 462
V+W +LL A KV+ ++IGE+A E+L L P NP ++++L+N+Y A +++D AR++ M
Sbjct: 359 VIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAM 418
Query: 463 ADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQME 506
D + G S +E + + KF S P + + ++ +++
Sbjct: 419 RDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILRELK 462
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 4/226 (1%)
Query: 76 AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXG-IGPDNFIY 134
A G ME +F + E F +N +I+G G + P++
Sbjct: 132 ANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATM 191
Query: 135 PFLLKACSLLGGVKEGIQIHGHVFKAGVGD-DIFVQNGLISMYGKCGAIKHACDVFEKMD 193
+L AC+ LG G +H + G D+ V+N LI MYGKCGAI+ A +VF+ +
Sbjct: 192 TLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK 251
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
+ + SW+ +I A + L L +M G ++ T V VL AC H+G G
Sbjct: 252 RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGI-SPDKVTFVGVLCACKHMGLVEDGL 310
Query: 254 CIHGILLRNISELNVVVKTS-LIDMYVKSGCIEKGVCVFQNMAEKS 298
+ + S + + ++D+ ++G + + V M K+
Sbjct: 311 AYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKA 356
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 25/255 (9%)
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM--SRE 226
Q L M G I A VF +M EK+V W+++I + +L D+ +R
Sbjct: 31 QMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGY----------LLNKDLVSARR 80
Query: 227 GHWRAEESTLV---SVLSACIHLGSPNLGRCIHGIL-LRNISELNVVVKTSLIDMYVKSG 282
+ E +V +++S I +G+ R + + R++ N V++ Y G
Sbjct: 81 YFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEG-----YANIG 135
Query: 283 CIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG-LAPDDVVYVGVL 341
+E VF +M E++ FS+ +I G + +G +E L F +++EG + P+D VL
Sbjct: 136 DMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVL 195
Query: 342 SACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPN 401
SAC+ G + G K + K V ++D+ G+ G + A + K IK
Sbjct: 196 SACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG--IKRR 253
Query: 402 DVV-WRSLLSACKVH 415
D++ W ++++ H
Sbjct: 254 DLISWNTMINGLAAH 268
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 227/467 (48%), Gaps = 3/467 (0%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
+Q+H +K G F + +K S+ AC +F + S ++ M+ G
Sbjct: 241 RQIHCITIKNGLL--GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
GI P + +L ACS + ++EG Q+H + K G +F
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLF 358
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
L+ MY K G + A F+ + E+ VA W+++I + + L+L M G
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAG 418
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
+ T+ SVL AC L + LG+ +HG +++ L V + ++L MY K G +E G
Sbjct: 419 -IIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
VF+ K S+ MISGLS +G G EAL++F E+L EG+ PDDV +V ++SACSH
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
G V G F M + + P V HY CMVDLL RAG L+EA I+S I +WR
Sbjct: 538 GFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRI 597
Query: 408 LLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHL 467
LLSACK H E+G A EKL L Y+ L+ +Y + DV R+ + M +
Sbjct: 598 LLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGV 657
Query: 468 VQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGY 514
+ G S +E + + + FV D P + +++ + Q+ EG+
Sbjct: 658 SKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGF 704
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 167/391 (42%), Gaps = 51/391 (13%)
Query: 76 AKWGSMEYACSIFRQIEEPGSFEYNTMIRG---NVSIMNXXXXXXXXXXXXXXGIGPDNF 132
AK G + A SIF I +N++I G N I + I P+ +
Sbjct: 60 AKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAY 119
Query: 133 IYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKM 192
+ KA S L G Q H V K DI+V L+ MY K G ++ VF M
Sbjct: 120 TLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM 179
Query: 193 DEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEE----STLVSVLSACIHLGS 248
E++ +WS ++ +A + + + RE ++ + ++S L+A I++G
Sbjct: 180 PERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG- 238
Query: 249 PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISG 308
LGR IH I ++N V + +L+ MY K + + +F + +++ +++ M++G
Sbjct: 239 --LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTG 296
Query: 309 LSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC---FKNMQFEHK 365
S +G EA+++FS + G+ P + VGVL+ACS + EG Q + FE
Sbjct: 297 YSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 366 IKPTVQHYGCMVDLLGRAGMLREA----------------------------------YG 391
+ T +VD+ +AG L +A Y
Sbjct: 357 LFATT----ALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 392 LIKSMPIKPNDVVWRSLLSACKVHLNLEIGE 422
+K+ I PND S+L AC LE+G+
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 10/268 (3%)
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA- 208
G +HG + + G I N L++ Y KCG + A +F + K V SW+++I ++
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 209 --CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISEL 266
+ + L +M R TL + A L S +GR H ++++ S
Sbjct: 93 NGGISSSYTVMQLFREM-RAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG 151
Query: 267 NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEIL 326
++ V TSL+ MY K+G +E G+ VF M E++ ++++ M+SG + G EA++VF+ L
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 327 ---EEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRA 383
EEG + D V+ VLS+ + V G Q + ++ + V +V + +
Sbjct: 212 REKEEG-SDSDYVFTAVLSSLAATIYVGLGRQ-IHCITIKNGLLGFVALSNALVTMYSKC 269
Query: 384 GMLREAYGLIKSMPIKPNDVVWRSLLSA 411
L EA + S + N + W ++++
Sbjct: 270 ESLNEACKMFDSSGDR-NSITWSAMVTG 296
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 3/204 (1%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+EE KQ+H+ +LKLGF F + LV AK G + A F ++E + ++I
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDM--YAKAGCLADARKGFDCLQERDVALWTSLI 395
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
G V + GI P++ +LKACS L ++ G Q+HGH K G G
Sbjct: 396 SGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFG 455
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
++ + + L +MY KCG+++ VF + K V SW+A+I + + L L +M
Sbjct: 456 LEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 515
Query: 224 SREGHWRAEESTLVSVLSACIHLG 247
EG ++ T V+++SAC H G
Sbjct: 516 LAEG-MEPDDVTFVNIISACSHKG 538
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 211/353 (59%), Gaps = 2/353 (0%)
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
N LI+ Y G ++ A +F +M K + SW+ +I ++ + + + + + M EG
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG-I 1028
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
+E T+ +V+SAC HLG +G+ +H L+N L+V + ++L+DMY K G +E+ +
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGL 349
VF N+ +K+ F + +I GL+ HG EAL++F+++ E + P+ V +V V +AC+HAGL
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 350 VNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
V+EG + +++M ++ I V+HYG MV L +AG++ EA LI +M +PN V+W +LL
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 410 SACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQ 469
C++H NL I EIA KL +L P N G Y +L +MYA ++W DVA IR M + + +
Sbjct: 1209 DGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
Query: 470 T-PGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQV 521
PG S + +++ + F + D+S D + ++ ++ Q+ GY +T V
Sbjct: 1269 ICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 166/411 (40%), Gaps = 46/411 (11%)
Query: 5 TVLSQTHLLSLPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSF 64
+ H L +PS + S ++K+C + + + A ++K D
Sbjct: 747 NAFANVHSLRVPSHHLRDFSASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCR 806
Query: 65 CGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXX 124
+ + C + ++ A S Q++EP F YN + +G V+ +
Sbjct: 807 LMNQFITACT--SFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR 864
Query: 125 XGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKH 184
+ P ++ Y L+KA S E +Q H++K G G + +Q LI Y G I+
Sbjct: 865 DSVSPSSYTYSSLVKASSFASRFGESLQ--AHIWKFGFGFHVKIQTTLIDFYSATGRIRE 922
Query: 185 ACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI 244
A VF++M E+ +W +T+VS +
Sbjct: 923 ARKVFDEMPERDDIAW---------------------------------TTMVSAYRRVL 949
Query: 245 HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
+ S N L +SE N LI+ Y+ G +E+ +F M K S+T
Sbjct: 950 DMDSAN-------SLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTT 1002
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
MI G S + EA+ VF +++EEG+ PD+V V+SAC+H G++ G + ++
Sbjct: 1003 MIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHM-YTLQN 1061
Query: 365 KIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
V +VD+ + G L A + ++P K N W S++ H
Sbjct: 1062 GFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAH 1111
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 3/250 (1%)
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLL 138
G++E A S+F Q+ + TMI+G GI PD ++
Sbjct: 980 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 139 KACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVA 198
AC+ LG ++ G ++H + + G D+++ + L+ MY KCG+++ A VF + +K++
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1099
Query: 199 SWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGI 258
W++II A + L + M E + T VSV +AC H G + GR I+
Sbjct: 1100 CWNSIIEGLAAHGFAQEALKMFAKMEMES-VKPNAVTFVSVFTACTHAGLVDEGRRIYRS 1158
Query: 259 LLRNISEL-NVVVKTSLIDMYVKSGCIEKGVCVFQNMA-EKSRFSYTVMISGLSIHGHGA 316
++ + S + NV ++ ++ K+G I + + + NM E + + ++ G IH +
Sbjct: 1159 MIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLV 1218
Query: 317 EALQVFSEIL 326
A F++++
Sbjct: 1219 IAEIAFNKLM 1228
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/532 (28%), Positives = 264/532 (49%), Gaps = 40/532 (7%)
Query: 29 FNEQGWYPLLKRC---KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWG---SME 82
F+E + + C K + E Q++ +K D C VA A+ +G ++
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD-VC----VANAAIDMYGKCQALA 434
Query: 83 YACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACS 142
A +F ++ + +N +I + I PD F + +LKAC+
Sbjct: 435 EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 494
Query: 143 LLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV-------------- 188
G + G++IH + K+G+ + V LI MY KCG I+ A +
Sbjct: 495 G-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTM 553
Query: 189 --FEKMDEKSV----ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSA 242
EKM K + SW++II + E ML M G ++ T +VL
Sbjct: 554 EELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG-ITPDKFTYATVLDT 612
Query: 243 CIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSY 302
C +L S LG+ IH +++ + +V + ++L+DMY K G + +F+ + ++
Sbjct: 613 CANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTW 672
Query: 303 TVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQF 362
MI G + HG G EA+Q+F ++ E + P+ V ++ +L AC+H GL+++GL+ F M+
Sbjct: 673 NAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 732
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHL-NLEIG 421
++ + P + HY MVD+LG++G ++ A LI+ MP + +DV+WR+LL C +H N+E+
Sbjct: 733 DYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVA 792
Query: 422 EIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERK 481
E A L L+P + Y +L+N+YA A W V+ +RR M L + PG S VE + +
Sbjct: 793 EEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDE 852
Query: 482 VYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKP-DTSQVLLDVDEDEKRE 532
++ F+ D++ P ++ IY E L + KP D S + V+ +E+ +
Sbjct: 853 LHVFLVGDKAHPRWEEIYE-----ELGLIYSEMKPFDDSSFVRGVEVEEEDQ 899
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 218/520 (41%), Gaps = 77/520 (14%)
Query: 9 QTHLLSLP-STPPQCSELSTRFNEQGWYPLLKRCKSMEEFK---QVHAHVLKLGFFCDSF 64
Q +LLSL + +++ ++ + +L+ C ++ E + Q+HAH LK F D
Sbjct: 258 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAAD-- 315
Query: 65 CGSNLVATCAL---AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXX 121
+V T L AK +M+ A +F E YN MI G +
Sbjct: 316 ---GIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 122 XXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGA 181
G+G D + +AC+L+ G+ EG+QI+G K+ + D+ V N I MYGKC A
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 182 IKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+ A VF++M + SW+AII AH ++ L L M R +E T S+L
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSILK 491
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS 301
AC GS G IH ++++ N V SLIDMY K G IE+ + +++ S
Sbjct: 492 ACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 302 YTV--------------------MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVL 341
T+ +ISG + +A +F+ ++E G+ PD Y VL
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Query: 342 SACS-----------HAGLVNEGLQC-------------------FKNMQFEHKIKPTVQ 371
C+ HA ++ + LQ + FE ++
Sbjct: 611 DTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFV 670
Query: 372 HYGCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSACKVHLNLEIGEIAAEKL 428
+ M+ G EA L + M IKPN V + S+L AC H+ L + E
Sbjct: 671 TWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRAC-AHMGLI--DKGLEYF 727
Query: 429 FM------LNPNNPGDYLVLANMYARAHKWNDVARIRREM 462
+M L+P P Y + ++ ++ K + REM
Sbjct: 728 YMMKRDYGLDPQLP-HYSNMVDILGKSGKVKRALELIREM 766
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 151/336 (44%), Gaps = 3/336 (0%)
Query: 76 AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYP 135
+K M A S F + +N+M+ G + GI D +
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Query: 136 FLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK 195
+LK CS L G+QIHG V + G D+ + L+ MY K + VF+ + EK
Sbjct: 185 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 196 SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCI 255
+ SWSAII + L +M + + +S SVL +C L LG +
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKV-NAGVSQSIYASVLRSCAALSELRLGGQL 303
Query: 256 HGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHG 315
H L++ + +V+T+ +DMY K ++ +F N +R SY MI+G S HG
Sbjct: 304 HAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG 363
Query: 316 AEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGC 375
+AL +F ++ GL D++ GV AC+ ++EGLQ + + + + V
Sbjct: 364 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-GLAIKSSLSLDVCVANA 422
Query: 376 MVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+D+ G+ L EA+ + M + + V W ++++A
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 32/243 (13%)
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
+ F+ K C+ G ++ G Q H H+ +G FV N L+ +Y A VF+KM
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 194 EKSVASWSAIIGAHACAE------------------MWHQCLM-------------LLGD 222
+ V SW+ +I ++ + W+ L + D
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 223 MSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSG 282
M REG + T +L C L +LG IHGI++R + +VV ++L+DMY K
Sbjct: 171 MGREG-IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 283 CIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLS 342
+ + VFQ + EK+ S++ +I+G + + AL+ F E+ + +Y VL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 343 ACS 345
+C+
Sbjct: 290 SCA 292
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 255/506 (50%), Gaps = 25/506 (4%)
Query: 32 QGWYPLL---KRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLV-ATCALAKWGS-MEYACS 86
Q W L+ +RC ++++ K H+ + G +++ S L+ A L YA S
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 87 IFRQIEEPGSFEYNTMIR---GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSL 143
IF IE P SF Y+TMIR + I P + FL+ AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 144 LGGVKEGIQIHGHVFKAGVG-DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSA 202
G QIH V K GV D VQ G++ +Y + + A VF+++ + V W
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 203 IIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN 262
++ + + + L + +M G +E ++ + L+AC +G+ G+ IH + +
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRG-IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 263 -ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQV 321
E +V V T+L+DMY K GCIE V VF+ + ++ FS+ +I G + +G+ +A
Sbjct: 248 RWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTC 307
Query: 322 FSEI-LEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLL 380
I E+G+ PD VV +GVL+AC+H G + EG +NM+ + I P +HY C+VDL+
Sbjct: 308 LDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLM 367
Query: 381 GRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNN----P 436
RAG L +A LI+ MP+KP VW +LL+ C+ H N+E+GE+A + L L N
Sbjct: 368 CRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEE 427
Query: 437 GDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFD 496
+ L+N+Y + + ++R + + + +TPG+S++E + V KFVS D S P
Sbjct: 428 AALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLL 487
Query: 497 TIYNMIHQMEWQLEFEGYKPDTSQVL 522
I+ +IH + D SQ+L
Sbjct: 488 QIHTLIHLL---------SVDASQIL 504
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 242/460 (52%), Gaps = 16/460 (3%)
Query: 36 PLLKRC---KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE 92
P+ K C + E KQ+H V K+GF+ D + ++LV + G AC +F ++
Sbjct: 111 PVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVC--GESRNACKVFGEMP 168
Query: 93 EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQ 152
+ +I G + P+ Y +L + +G + G
Sbjct: 169 VRDVVSWTGIITG---FTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKG 225
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEM 212
IHG + K + N LI MY KC + A VF ++++K SW+++I E
Sbjct: 226 IHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCER 285
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKT 272
+ + L M + + L SVLSAC LG+ + GR +H +L + + + T
Sbjct: 286 SKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGT 345
Query: 273 SLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAP 332
+++DMY K G IE + +F + K+ F++ ++ GL+IHGHG E+L+ F E+++ G P
Sbjct: 346 AIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKP 405
Query: 333 DDVVYVGVLSACSHAGLVNEGLQCFKNMQF-EHKIKPTVQHYGCMVDLLGRAGMLREAYG 391
+ V ++ L+AC H GLV+EG + F M+ E+ + P ++HYGCM+DLL RAG+L EA
Sbjct: 406 NLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALE 465
Query: 392 LIKSMPIKPNDVVWRSLLSACKVHLNL-EIGEIAAEKLFMLNPNNPGDYLVLANMYARAH 450
L+K+MP+KP+ + ++LSACK L E+ + + + + G Y++L+N++A
Sbjct: 466 LVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANR 525
Query: 451 KWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDR 490
+W+DVARIRR M K + + PG S +E KF++ D+
Sbjct: 526 RWDDVARIRRLMKVKGISKVPGSSYIE------KFMTLDQ 559
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 173/381 (45%), Gaps = 9/381 (2%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEP-G 95
L+ RC S+ FKQ+ ++ D N V T Y+ I I
Sbjct: 12 LISRCSSLRVFKQIQTQLITRDLLRDDLI-INKVVTFLGKSADFASYSSVILHSIRSVLS 70
Query: 96 SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
SF YNT++ G PD F +P + KAC G++EG QIHG
Sbjct: 71 SFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 130
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
V K G DDI+VQN L+ YG CG ++AC VF +M + V SW+ II ++ +
Sbjct: 131 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
L M E + +T V VL + +G +LG+ IHG++L+ S +++ +LI
Sbjct: 191 ALDTFSKMDVEPNL----ATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 276 DMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEI-LEEGLAPDD 334
DMYVK + + VF + +K + S+ MISGL EA+ +FS + G+ PD
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDG 306
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
+ VLSAC+ G V+ G + IK +VD+ + G + A +
Sbjct: 307 HILTSVLSACASLGAVDHG-RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 395 SMPIKPNDVVWRSLLSACKVH 415
+ K N W +LL +H
Sbjct: 366 GIRSK-NVFTWNALLGGLAIH 385
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 238/454 (52%), Gaps = 7/454 (1%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
KQVH +K G D GS+L+ +K G ++ A +F + E N +I G
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDM--YSKCGIIKDARKVFSSLPEWSVVSMNALIAG-Y 605
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDD-I 166
S N G+ P + +++AC + G Q HG + K G +
Sbjct: 606 SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 167 FVQNGLISMYGKCGAIKHACDVFEKMDE-KSVASWSAIIGAHACAEMWHQCLMLLGDMSR 225
++ L+ MY + AC +F ++ KS+ W+ ++ H+ + + L +M
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
+G +++T V+VL C L S GR IH ++ +L+ + +LIDMY K G ++
Sbjct: 726 DGVL-PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMK 784
Query: 286 KGVCVFQNMAEKSRF-SYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC 344
VF M +S S+ +I+G + +G+ +AL++F + + + PD++ ++GVL+AC
Sbjct: 785 GSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTAC 844
Query: 345 SHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV 404
SHAG V++G + F+ M ++ I+ V H CMVDLLGR G L+EA I++ +KP+ +
Sbjct: 845 SHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARL 904
Query: 405 WRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMAD 464
W SLL AC++H + GEI+AEKL L P N Y++L+N+YA W +R+ M D
Sbjct: 905 WSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRD 964
Query: 465 KHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTI 498
+ + + PG+S ++ E++ + F + D+S E I
Sbjct: 965 RGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKI 998
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 172/365 (47%), Gaps = 10/365 (2%)
Query: 50 VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSI 109
VHA +KLG + + GS+LV+ +K ME A +F +EE +N MIRG
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSM--YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 110 MNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQ 169
G D+F + LL C+ ++ G Q H + K + ++FV
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
N L+ MY KCGA++ A +FE+M ++ +W+ IIG++ E + L M+ G
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG-I 525
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
++ + L S L AC H+ G+ +H + ++ + ++ +SLIDMY K G I+
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGL 349
VF ++ E S S +I+G S + EA+ +F E+L G+ P ++ + ++ AC
Sbjct: 586 VFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Query: 350 VNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLG---RAGMLREAYGLIKSMPIKPNDVVWR 406
+ G Q F + ++ G + LLG + + EA L + + V+W
Sbjct: 645 LTLGTQ-FHGQITKRGFSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSPKSIVLWT 701
Query: 407 SLLSA 411
++S
Sbjct: 702 GMMSG 706
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 178/382 (46%), Gaps = 14/382 (3%)
Query: 37 LLKRCKS---MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
LL C + +E Q H+ ++K + F G+ LV AK G++E A IF ++ +
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM--YAKCGALEDARQIFERMCD 491
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+ +NT+I V N GI D LKAC+ + G+ +G Q+
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
H K G+ D+ + LI MY KCG IK A VF + E SV S +A+I ++ +
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL- 610
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG-ILLRNISELNVVVKT 272
+ ++L +M G E T +++ AC S LG HG I R S +
Sbjct: 611 EEAVVLFQEMLTRG-VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 273 SLIDMYVKSGCIEKGVCVFQNMAE-KSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLA 331
SL+ MY+ S + + +F ++ KS +T M+SG S +G EAL+ + E+ +G+
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729
Query: 332 PDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE--HKIKPTVQHYGCMVDLLGRAGMLREA 389
PD +V VL CS + EG + ++ F H + + ++D+ + G ++ +
Sbjct: 730 PDQATFVTVLRVCSVLSSLREG-RAIHSLIFHLAHDLDELTSN--TLIDMYAKCGDMKGS 786
Query: 390 YGLIKSMPIKPNDVVWRSLLSA 411
+ M + N V W SL++
Sbjct: 787 SQVFDEMRRRSNVVSWNSLING 808
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 144/321 (44%), Gaps = 2/321 (0%)
Query: 77 KWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPF 136
+ G ++ A +F ++ P +N MI G+ +
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
+L A ++ + G+ +H K G+ +I+V + L+SMY KC ++ A VFE ++EK+
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
W+A+I +A H+ + L DM G + ++ T S+LS C +G H
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSG-YNIDDFTFTSLLSTCAASHDLEMGSQFH 451
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
I+++ N+ V +L+DMY K G +E +F+ M ++ ++ +I + +
Sbjct: 452 SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES 511
Query: 317 EALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCM 376
EA +F + G+ D L AC+H + +G Q + + + + +
Sbjct: 512 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSL 570
Query: 377 VDLLGRAGMLREAYGLIKSMP 397
+D+ + G++++A + S+P
Sbjct: 571 IDMYSKCGIIKDARKVFSSLP 591
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 182/431 (42%), Gaps = 31/431 (7%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
K VH+ L LG + G+ +V AK + YA F +E+ + +N+M+
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDL--YAKCAQVSYAEKQFDFLEKDVT-AWNSMLSMYS 136
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
SI I P+ F + +L C+ V+ G QIH + K G+ + +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
L+ MY KC I A VFE + + + W+ + + A + + +++ M EG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
H R + V+V++ I LG R + G +S +VV +I + K GC
Sbjct: 257 H-RPDHLAFVTVINTYIRLGKLKDARLLFG----EMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 288 VCVFQNMAEKS----RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+ F NM + S R + ++S + I + L V +E ++ GLA + V ++S
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV 403
S + + F+ ++ ++ + G + G + + E + +KS +D
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN--GESHKVMELFMDMKSSGYNIDDF 429
Query: 404 VWRSLLSACKVHLNLEIG---------EIAAEKLFMLNPNNPGDYLVLANMYARAHKWND 454
+ SLLS C +LE+G + A+ LF+ N L +MYA+ D
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA--------LVDMYAKCGALED 481
Query: 455 VARIRREMADK 465
+I M D+
Sbjct: 482 ARQIFERMCDR 492
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 143/327 (43%), Gaps = 11/327 (3%)
Query: 146 GVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIG 205
++ G +H G+ + + N ++ +Y KC + +A F+ + EK V +W++++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 206 AHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISE 265
++ + L + E + T VLS C + GR IH +++ E
Sbjct: 134 MYSSIGKPGKVLRSFVSLF-ENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 266 LNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEI 325
N +L+DMY K I VF+ + + + +T + SG G EA+ VF +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 326 LEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAG- 384
+EG PD + +V V++ G + + F M P V + M+ G+ G
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGC 307
Query: 385 --MLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIA-AEKLFMLNPNNPGDYLV 441
+ E + ++ +K S+LSA + NL++G + AE + + +N
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 442 LANMYARAHKWNDVARIRREMADKHLV 468
L +MY++ K A++ + +K+ V
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDV 394
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/513 (29%), Positives = 257/513 (50%), Gaps = 39/513 (7%)
Query: 30 NEQGWYPLLKRCKSMEEFKQVHAHVLKLG-FFCDSFCGSNLVATCALAKWGSMEYACSIF 88
+ Q + L+K + E KQ+H H++ G ++ ++LV + G+ A +F
Sbjct: 132 DRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKF--YMELGNFGVAEKVF 189
Query: 89 RQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVK 148
++ P +N MI G GI PD + LL C L ++
Sbjct: 190 ARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIR 249
Query: 149 EGIQIHGHVFKAG--VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII-- 204
G +HG + + G ++ + N L+ MY KC A F+ M +K + SW+ ++
Sbjct: 250 LGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVG 309
Query: 205 --------GAHACAEM--------WHQCLM--------------LLGDMSREGHWRAEES 234
A A + W+ L L +M+ + +
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRV 369
Query: 235 TLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNM 294
T+VS++S + G + GR +HG+++R + + + ++LIDMY K G IE+ VF+
Sbjct: 370 TMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTA 429
Query: 295 AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGL 354
EK +T MI+GL+ HG+G +ALQ+F + EEG+ P++V + VL+ACSH+GLV EGL
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGL 489
Query: 355 QCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI-KSMPIKPNDVVWRSLLSACK 413
F +M+ + P +HYG +VDLL RAG + EA ++ K MP++P+ +W S+LSAC+
Sbjct: 490 HVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACR 549
Query: 414 VHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGF 473
++E E+A +L L P G Y++L+N+YA +W + R M ++ + +T G+
Sbjct: 550 GGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGY 609
Query: 474 SMVEAERKVYKFVSQDR-SQPEFDTIYNMIHQM 505
S V +++FV+ ++ + P + I ++ +
Sbjct: 610 SSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHL 642
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 183/422 (43%), Gaps = 53/422 (12%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE-EPG 95
LL+ C S +FKQV A +++ CD+F S L+ A+ +++ A +F P
Sbjct: 40 LLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPN 99
Query: 96 SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
F YNTMI S N + PD + +L+KA S L VK QIH
Sbjct: 100 VFVYNTMISAVSSSKNECFGLYSSMIRHR--VSPDRQTFLYLMKASSFLSEVK---QIHC 154
Query: 156 HVFKAG---VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEM 212
H+ +G +G+ ++ N L+ Y + G A VF +M V+S++ +I +A
Sbjct: 155 HIIVSGCLSLGN--YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGF 212
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN--ISELNVVV 270
+ L L M +G +E T++S+L C HL LG+ +HG + R + N+++
Sbjct: 213 SLEALKLYFKMVSDG-IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLIL 271
Query: 271 KTSLIDMYVKSGCIEKGVC--VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEI--- 325
+L+DMY K C E G+ F M +K S+ M+ G G A VF ++
Sbjct: 272 SNALLDMYFK--CKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 326 ------------------------------LEEGLAPDDVVYVGVLSACSHAGLVNEGLQ 355
+ E + PD V V ++S ++ G ++ G +
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG-R 388
Query: 356 CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
+ ++K ++D+ + G++ A+ + K+ K + +W S+++ H
Sbjct: 389 WVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK-DVALWTSMITGLAFH 447
Query: 416 LN 417
N
Sbjct: 448 GN 449
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/428 (31%), Positives = 225/428 (52%), Gaps = 38/428 (8%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
C+ L + ++HG+V K G + + +N LI +YGK G +K A +F ++ K
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGH----------W-----------RAEES- 234
+ SW+++I + A + L L ++ H W R ++S
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 235 ----------------TLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMY 278
T+ +LS C L + NLGR IHG ++R N++V+ +L++MY
Sbjct: 420 EYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMY 479
Query: 279 VKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYV 338
K G + +G VF+ + +K S+ +I G +HG +AL +F ++ G PD + V
Sbjct: 480 AKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALV 539
Query: 339 GVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPI 398
VLSACSHAGLV +G + F +M ++P +HY C+VDLLGR G L+EA ++K+MP+
Sbjct: 540 AVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPM 599
Query: 399 KPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARI 458
+P V +LL++C++H N++I E A +L +L P G Y++L+N+Y+ +W + A +
Sbjct: 600 EPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANV 659
Query: 459 RREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDT 518
R K L + G S +E ++K YKF S Q EF+TIY ++ + + +G D
Sbjct: 660 RALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDG 719
Query: 519 SQVLLDVD 526
+ D+D
Sbjct: 720 NNYEDDLD 727
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 191/449 (42%), Gaps = 55/449 (12%)
Query: 13 LSLPSTPPQCSELS-TRFNEQGWYP----LLKRCKSMEEFKQVHAHVLKLGF-FCDSFCG 66
+S P T S S T N+Q + LL C + ++ +QVHA VL F F
Sbjct: 33 ISSPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLA 92
Query: 67 SNLVATCALAKWGSMEYACSIFRQIEEPGSFE---YNTMIRGNVSIMNXXXXXXXXXXXX 123
+NL++ A+ G + A ++F + + +N++++ NVS
Sbjct: 93 ANLISV--YARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 124 XXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIK 183
G+ D +I P +L+AC LG H V + G+ +++ V N L+++Y K G +
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210
Query: 184 HACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVL--- 240
A ++F +M ++ SW+ +I + + + M RE ++ +E T SVL
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQRE-EFKPDEVTWTSVLSCH 269
Query: 241 --------------------------------SACIHLGSPNLGRCIHGILLRNISELNV 268
S C L + ++ +HG +++ E +
Sbjct: 270 SQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYL 329
Query: 269 VVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
+ +LI +Y K G ++ +F+ + K S+ +I+ G EAL +FSE+ E
Sbjct: 330 PSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEM 389
Query: 329 ----GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAG 384
+ + V + V+ C+ G ++ L+ F+ MQF + +V C++ +
Sbjct: 390 NHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT-ICCILSICAELP 448
Query: 385 ML---REAYGLIKSMPIKPNDVVWRSLLS 410
L RE +G + + N +V +L++
Sbjct: 449 ALNLGREIHGHVIRTSMSENILVQNALVN 477
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/336 (39%), Positives = 193/336 (57%), Gaps = 14/336 (4%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
+L C + G+ +HG+ K+G+ V NGLI+MY K ++ +FE++ E
Sbjct: 353 ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP 412
Query: 197 VASWSAIIG-------AHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSP 249
+ SW+++I A E++HQ +ML G + + T+ S+L+ C L
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQ-MMLTGGL------LPDAITIASLLAGCSQLCCL 465
Query: 250 NLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGL 309
NLG+ +HG LRN E V T+LIDMY K G + VF+++ ++ MISG
Sbjct: 466 NLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGY 525
Query: 310 SIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPT 369
S+ G AL + E+ E+GL PD++ ++GVLSAC+H G V+EG CF+ M E I PT
Sbjct: 526 SLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPT 585
Query: 370 VQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLF 429
+QHY MV LLGRA + EA LI M IKP+ VW +LLSAC +H LE+GE A K+F
Sbjct: 586 LQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMF 645
Query: 430 MLNPNNPGDYLVLANMYARAHKWNDVARIRREMADK 465
ML+ N G Y++++N+YA W+DV R+R M D
Sbjct: 646 MLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDN 681
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 127 IGPDNFIYPFLLKACSL-LGGVKEGI-QIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKH 184
+ P++F L+A + K + Q+ H+ K+G+ ++V+ L+++Y K G +
Sbjct: 44 LTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTS 103
Query: 185 ACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI 244
A +F++M E+ W+A+I ++ L M ++G + +TLV++L C
Sbjct: 104 AQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQG-FSPSATTLVNLLPFCG 162
Query: 245 HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
G + GR +HG+ ++ EL+ VK +LI Y K + +F+ M +KS S+
Sbjct: 163 QCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNT 222
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
MI S G EA+ VF + E+ + V + +LSA
Sbjct: 223 MIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 164/395 (41%), Gaps = 48/395 (12%)
Query: 36 PLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCA-LAKWGSMEYACSIFRQIEEP 94
P +C + + + VH K G DS + L++ + A+ GS E +FR++++
Sbjct: 159 PFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEV---LFREMKDK 215
Query: 95 GSFEYNTMIRG--NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQ 152
+ +NTMI + I P I +LL
Sbjct: 216 STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII--------NLLSAHVSHEP 267
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEM 212
+H V K G+ +DI V L+ Y +CG + A ++ + S+ ++I+ +A
Sbjct: 268 LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEK-- 325
Query: 213 WHQCLMLLGDM---------SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNI 263
GDM +R+ + + LV +L C ++G +HG +++
Sbjct: 326 --------GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSG 377
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
+V LI MY K +E + +F+ + E S+ +ISG G + A +VF
Sbjct: 378 LCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFH 437
Query: 324 E-ILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ----CFKNMQFEHKIKPTVQHYGC--M 376
+ +L GL PD + +L+ CS +N G + +N FE+ +++ C +
Sbjct: 438 QMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRN-NFEN------ENFVCTAL 490
Query: 377 VDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+D+ + G +A + KS+ P W S++S
Sbjct: 491 IDMYAKCGNEVQAESVFKSIK-APCTATWNSMISG 524
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 9/309 (2%)
Query: 46 EFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRG 105
+ +QV H+ K G D F K G + A +F ++ E + +N +I G
Sbjct: 68 QVEQVQTHLTKSGL--DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICG 125
Query: 106 NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDD 165
G P LL C G V +G +HG K+G+ D
Sbjct: 126 YSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELD 185
Query: 166 IFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSR 225
V+N LIS Y KC + A +F +M +KS SW+ +IGA++ + + + + + +M
Sbjct: 186 SQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM-F 244
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
E + T++++LSA H+ L H ++++ ++ V TSL+ Y + GC+
Sbjct: 245 EKNVEISPVTIINLLSA--HVSHEPL----HCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 286 KGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS 345
++ + + S T ++S + G A+ FS+ + + D V VG+L C
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK 358
Query: 346 HAGLVNEGL 354
+ ++ G+
Sbjct: 359 KSSHIDIGM 367
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 4/205 (1%)
Query: 50 VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV-S 108
+H + +K G + + L+ +K+ +E +F Q++E +N++I G V S
Sbjct: 369 LHGYAIKSGLCTKTLVVNGLITM--YSKFDDVETVLFLFEQLQETPLISWNSVISGCVQS 426
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
G+ PD LL CS L + G ++HG+ + ++ FV
Sbjct: 427 GRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFV 486
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGH 228
LI MY KCG A VF+ + A+W+++I ++ + + H+ L +M RE
Sbjct: 487 CTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM-REKG 545
Query: 229 WRAEESTLVSVLSACIHLGSPNLGR 253
+ +E T + VLSAC H G + G+
Sbjct: 546 LKPDEITFLGVLSACNHGGFVDEGK 570
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 268 VVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILE 327
V VKTSL+++Y+K GC+ +F M E+ + +I G S +G+ +A ++F +L+
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144
Query: 328 EGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLR 387
+G +P V +L C G V++G + + + ++ Q ++ + L
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQG-RSVHGVAAKSGLELDSQVKNALISFYSKCAELG 203
Query: 388 EAYGLIKSMPIKPNDVVWRSLLSA 411
A L + M K + V W +++ A
Sbjct: 204 SAEVLFREMKDK-STVSWNTMIGA 226
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 216/392 (55%), Gaps = 1/392 (0%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ + Y LL+ C +G +IH +F G + +++ L+ +Y G ++ A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
+F + + + W+A+I + + + L + DM R+ ++ T SV AC
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDM-RQNRIVPDQYTFASVFRACSA 221
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
L G+ H ++++ + N++V ++L+DMY K G VF ++ ++ ++T +
Sbjct: 222 LDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSL 281
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
ISG HG +E L+ F ++ EEG P+ V ++ VL+AC+H GLV++G + F +M+ ++
Sbjct: 282 ISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYG 341
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAA 425
I+P QHY MVD LGRAG L+EAY + P K + VW SLL AC++H N+++ E+AA
Sbjct: 342 IEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAA 401
Query: 426 EKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKF 485
K L+P N G+Y+V AN YA +++RR+M + + + PG+S +E + +V++F
Sbjct: 402 TKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRF 461
Query: 486 VSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPD 517
+ D S + IY +H+M Y PD
Sbjct: 462 MKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 6/219 (2%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
LL+ CK +E+ K++HA + +GF + + L+ AL+ G ++ A +FR ++
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALS--GDLQTAGILFRSLKI 171
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+N MI G V I PD + + + +ACS L ++ G +
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
H + K + +I V + L+ MY KC + VF+++ ++V +W+++I +
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 291
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
+ L M EG R T + VL+AC H G + G
Sbjct: 292 SEVLKCFEKMKEEG-CRPNPVTFLVVLTACNHGGLVDKG 329
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 245/481 (50%), Gaps = 11/481 (2%)
Query: 58 GFFCDSFCGSNLVATCAL----AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXX 113
GF +F +V +L ++ GS+ + +F + E +NTMI V
Sbjct: 342 GFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDD 401
Query: 114 XXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLI 173
G D LL A S L + G Q H + + G+ + + + LI
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLI 460
Query: 174 SMYGKCGAIKHACDVFEK--MDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRA 231
MY K G I+ + +FE E+ A+W+++I + + ++ M E + R
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNIRP 519
Query: 232 EESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVF 291
T+ S+L AC +GS +LG+ +HG +R + NV V ++L+DMY K+G I+ +F
Sbjct: 520 NAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF 579
Query: 292 QNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVN 351
E++ +YT MI G HG G A+ +F + E G+ PD + +V VLSACS++GL++
Sbjct: 580 SQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLID 639
Query: 352 EGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV-VWRSLLS 410
EGL+ F+ M+ + I+P+ +HY C+ D+LGR G + EAY +K + + N +W SLL
Sbjct: 640 EGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLG 699
Query: 411 ACKVHLNLEIGEIAAEKL--FMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLV 468
+CK+H LE+ E +E+L F N G ++L+NMYA KW V ++RR M +K L
Sbjct: 700 SCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLK 759
Query: 469 QTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDED 528
+ G S +E V FVS+D+ P IY++I + + + + V ++ D
Sbjct: 760 KEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLELD 819
Query: 529 E 529
E
Sbjct: 820 E 820
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 29/297 (9%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAG--VGDDIFVQNGLISMYGKCGAIKHAC 186
P +F+ F A S+ +K+ +G + K G D+FV + ISMY + G I+ +
Sbjct: 214 PVSFVNVF--PAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSR 271
Query: 187 DVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHL 246
VF+ E+++ W+ +IG + + + + L + ++E T + SA L
Sbjct: 272 RVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMI 306
LGR HG + +N EL +V+ SL+ MY + G + K VF +M E+ S+ MI
Sbjct: 332 QQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMI 391
Query: 307 SGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS-----------HAGLVNEGLQ 355
S +G E L + E+ ++G D + +LSA S HA L+ +G+Q
Sbjct: 392 SAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ 451
Query: 356 CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPND-VVWRSLLSA 411
F+ M ++D+ ++G++R + L + D W S++S
Sbjct: 452 -FEGMN------------SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISG 495
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 145/347 (41%), Gaps = 20/347 (5%)
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP----DNFIY 134
G+ + A +F I +P + +NT+I G I N P D + Y
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIG--FICNNLPHEALLFYSRMKKTAPFTNCDAYTY 110
Query: 135 PFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACD------V 188
LKAC+ +K G +H H+ + V N L++MY C + V
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
F+ M K+V +W+ +I + + G M R + + V+V A S
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKPSPVSFVNVFPAVSISRS 229
Query: 249 PNLGRCIHGILLRNISEL--NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMI 306
+G++L+ E ++ V +S I MY + G IE VF + E++ + MI
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 307 SGLSIHGHGAEALQVFSE-ILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
+ E++++F E I + + D+V Y+ SA S V G Q + +
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV-WRSLLSA 411
P V MV + R G + +++G+ SM + DVV W +++SA
Sbjct: 350 ELPIVIVNSLMV-MYSRCGSVHKSFGVFLSM--RERDVVSWNTMISA 393
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/571 (28%), Positives = 272/571 (47%), Gaps = 49/571 (8%)
Query: 42 KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNT 101
K + + +VH+ +K+GF D G++LV +K G +E A +F ++ + +N+
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDM--YSKCGKLEDARKVFDSVKNKDVYTWNS 423
Query: 102 MIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAG 161
MI G G + ++ + A
Sbjct: 424 MITGYCQA-----------------------------------GYCGKAYELFTRMQDAN 448
Query: 162 VGDDIFVQNGLISMYGKCGAIKHACDVFEKMD-----EKSVASWSAIIGAHACAEMWHQC 216
+ +I N +IS Y K G A D+F++M+ +++ A+W+ II + +
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Query: 217 LMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLID 276
L L M + + T++S+L AC +L + R IHG +LR + VK +L D
Sbjct: 509 LELFRKM-QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTD 567
Query: 277 MYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVV 336
Y KSG IE +F M K ++ +I G +HG AL +F+++ +G+ P+
Sbjct: 568 TYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGT 627
Query: 337 YVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM 396
++ A G V+EG + F ++ ++ I P ++H MV L GRA L EA I+ M
Sbjct: 628 LSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
Query: 397 PIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVA 456
I+ +W S L+ C++H ++++ AAE LF L P N +++ +YA K
Sbjct: 688 NIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSL 747
Query: 457 RIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKP 516
+ D L + G S +E ++ F + D+S+ D +Y ++ +M +L+ +
Sbjct: 748 EGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMS-RLD---NRS 803
Query: 517 DTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGS--PMRISRNLRLCSDCHTYTKF 574
D L ++E+ + E HS+K A+AF LI +S S +RI +NLR+C DCH K+
Sbjct: 804 DQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKY 863
Query: 575 ISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+SK +I + D HHFK+G CSCKDYW
Sbjct: 864 VSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 161/344 (46%), Gaps = 19/344 (5%)
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
Y LL++C G + G +H F D+FV+ L+SMY KCG I A VF+ M
Sbjct: 84 YLKLLESCIDSGSIHLGRILHAR-FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR 142
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
E+++ +WSA+IGA++ W + L M ++G ++ +L C + G G+
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL-PDDFLFPKILQGCANCGDVEAGK 201
Query: 254 CIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHG 313
IH ++++ + V S++ +Y K G ++ F+ M E+ ++ ++ +G
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNG 261
Query: 314 HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHY 373
EA+++ E+ +EG++P V + ++ + G + + + M+ I V +
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME-TFGITADVFTW 320
Query: 374 GCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSACK----VHLNLEIGEIAAE 426
M+ L GM +A + + M + PN V S +SAC ++ E+ IA +
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 427 KLFMLNPNNPGDYLV---LANMYARAHKWNDVARIRREMADKHL 467
F+ D LV L +MY++ K D ++ + +K +
Sbjct: 381 MGFI------DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 418
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 174/431 (40%), Gaps = 76/431 (17%)
Query: 56 KLGFFC--DSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXX 113
+ G F D F + L++ AK G + A +F + E F ++ MI
Sbjct: 106 RFGLFTEPDVFVETKLLSM--YAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWR 163
Query: 114 XXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLI 173
G+ PD+F++P +L+ C+ G V+ G IH V K G+ + V N ++
Sbjct: 164 EVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSIL 223
Query: 174 SMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG------ 227
++Y KCG + A F +M E+ V +W++++ A+ + + L+ +M +EG
Sbjct: 224 AVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 228 HWR----------------------------AEESTLVSVLSACIHLG------------ 247
W A+ T +++S IH G
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 248 -----SPNLGRCIHGI-------LLRNISEL-NVVVKTSLID----------MYVKSGCI 284
PN + + ++ SE+ ++ VK ID MY K G +
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 285 EKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC 344
E VF ++ K +++ MI+G G+ +A ++F+ + + L P+ + + ++S
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Query: 345 SHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK---PN 401
G E + F+ M+ + K++ + ++ + G EA L + M PN
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Query: 402 DVVWRSLLSAC 412
V SLL AC
Sbjct: 524 SVTILSLLPAC 534
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 5/183 (2%)
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
+ + ST + +L +CI GS +LGR +H +E +V V+T L+ MY K GCI
Sbjct: 78 KVKRSTYLKLLESCIDSGSIHLGRILHA-RFGLFTEPDVFVETKLLSMYAKCGCIADARK 136
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGL 349
VF +M E++ F+++ MI S E ++F ++++G+ PDD ++ +L C++ G
Sbjct: 137 VFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGD 196
Query: 350 VNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV-WRSL 408
V G + ++ + + ++ ++ + + G L A + M + DV+ W S+
Sbjct: 197 VEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM--RERDVIAWNSV 253
Query: 409 LSA 411
L A
Sbjct: 254 LLA 256
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 225/429 (52%), Gaps = 3/429 (0%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
KQVH + LK G D GS+L +K GS+E + +F+ I + + +MI G
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTL--YSKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
G PD +L CS + G +IHG+ +AG+ +
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD 587
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
+ + L++MY KCG++K A V++++ E S S++I ++ + +L DM G
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
+ + + S+L A +LG +H + + V +SL+ MY K G I+
Sbjct: 648 -FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
F + ++T +I+ + HG EALQV++ + E+G PD V +VGVLSACSH
Sbjct: 707 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHG 766
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
GLV E +M ++ I+P +HY CMVD LGR+G LREA I +M IKP+ +VW +
Sbjct: 767 GLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGT 826
Query: 408 LLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHL 467
LL+ACK+H +E+G++AA+K L P++ G Y+ L+N+ A +W++V R+ M +
Sbjct: 827 LLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGV 886
Query: 468 VQTPGFSMV 476
+ PG+S V
Sbjct: 887 QKEPGWSSV 895
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 178/391 (45%), Gaps = 23/391 (5%)
Query: 34 WYPLLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCA-----LAKWGSMEYAC 85
+ +L C S+E+ K V A V+K CG+ V C AK G M A
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIK--------CGAEDVFVCTAIVDLYAKCGHMAEAM 305
Query: 86 SIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG 145
+F +I P + M+ G + G+ +N ++ AC
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 146 GVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASW-SAII 204
V E Q+H VFK+G D V LISMY K G I + VFE +D+ + + +I
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMI 425
Query: 205 GAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS 264
+ + ++ + + L M +EG R +E ++ S+LS L NLG+ +HG L++
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEG-LRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGL 481
Query: 265 ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSE 324
L++ V +SL +Y K G +E+ +FQ + K + MISG + +G+ EA+ +FSE
Sbjct: 482 VLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 325 ILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAG 384
+L++G +PD+ VL+ CS + G + I + +V++ + G
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKE-IHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 385 MLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
L+ A + +P + + V SL+S H
Sbjct: 601 SLKLARQVYDRLP-ELDPVSCSSLISGYSQH 630
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 177/391 (45%), Gaps = 23/391 (5%)
Query: 30 NEQGWYPLLKRCKSMEE--FKQ-VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACS 86
NE + ++ C +++ F + V H +K+G+F S L+ +K E A
Sbjct: 149 NEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDV--FSKNLRFEDAYK 206
Query: 87 IFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGG 146
+FR + +NT+I G + N PD++ Y +L AC+ L
Sbjct: 207 VFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEK 266
Query: 147 VKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGA 206
++ G + V K G +D+FV ++ +Y KCG + A +VF ++ SV SW+ ++
Sbjct: 267 LRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Query: 207 HACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL---GRCIHGILLRNI 263
+ + L + +M G T+ SV+SAC G P++ +H + ++
Sbjct: 326 YTKSNDAFSALEIFKEMRHSG-VEINNCTVTSVISAC---GRPSMVCEASQVHAWVFKSG 381
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS-YTVMISGLSIHGHGAEALQVF 322
L+ V +LI MY KSG I+ VF+++ + R + VMI+ S +A+++F
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLF 441
Query: 323 SEILEEGLAPDDVVYVGVLSA--CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLL 380
+ +L+EGL D+ +LS C + G G + + + + + L
Sbjct: 442 TRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS------LFTLY 495
Query: 381 GRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+ G L E+Y L + +P K N W S++S
Sbjct: 496 SKCGSLEESYKLFQGIPFKDN-ACWASMISG 525
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 33/224 (14%)
Query: 258 ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAE 317
+L R + +V + SL+ Y SG + +F + + S +MISG H E
Sbjct: 74 LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEE 133
Query: 318 ALQVFSEILEEGLAPDDVVYVGVLSACS--HAGLVNEGLQCF------------------ 357
+L+ FS++ G +++ Y V+SACS A L +E + C
Sbjct: 134 SLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALID 193
Query: 358 ---KNMQFEHKIKPTVQHYGCMVDLLGR--AGMLR-EAYG----LIKSMPI---KPNDVV 404
KN++FE K V AG LR + YG L M + KP+
Sbjct: 194 VFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 405 WRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYAR 448
+ S+L+AC L G++ ++ + + ++YA+
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAK 297
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/455 (32%), Positives = 238/455 (52%), Gaps = 18/455 (3%)
Query: 41 CKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSF 97
C +EE + VH+ + K+G D +L+ AK G + YA +F +I E +
Sbjct: 142 CAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMM--YAKCGQVGYARKLFDEITERDTV 199
Query: 98 EYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHV 157
+N+MI G G PD +L ACS LG ++ G +
Sbjct: 200 SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA 259
Query: 158 FKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCL 217
+G F+ + LISMYGKCG + A VF +M +K +W+A+I ++ +
Sbjct: 260 ITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAF 319
Query: 218 MLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISEL----NVVVKTS 273
L +M + G + TL +VLSAC +G+ LG+ I + SEL N+ V T
Sbjct: 320 KLFFEMEKTG-VSPDAGTLSTVLSACGSVGALELGKQIE----THASELSLQHNIYVATG 374
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
L+DMY K G +E+ + VF+ M K+ ++ MI+ + GH EAL +F + + P
Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPS 431
Query: 334 DVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
D+ ++GVLSAC HAGLV++G + F M + P ++HY ++DLL RAGML EA+ +
Sbjct: 432 DITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFM 491
Query: 394 KSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLF-MLNPNNPGDYLVLANMYARAHKW 452
+ P KP++++ ++L AC ++ I E A L M N G+Y++ +N+ A W
Sbjct: 492 ERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMW 551
Query: 453 NDVARIRREMADKHLVQTPGFSMVEAERKVYKFVS 487
++ A++R M D+ +V+TPG S +E E ++ +F++
Sbjct: 552 DESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 202/399 (50%), Gaps = 11/399 (2%)
Query: 15 LPSTPPQCSELSTRFN-EQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATC 73
P P+ E + R + E+ + LLK+C S+ + +Q+ A +L S N +
Sbjct: 20 FPKFKPRQFEEARRGDLERDFLFLLKKCISVNQLRQIQAQML-----LHSVEKPNFLIPK 74
Query: 74 ALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNX-XXXXXXXXXXXXXGIGPDNF 132
A+ + G Y+ +F EEP + +N MIRG + N G+ PD F
Sbjct: 75 AV-ELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKF 133
Query: 133 IYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKM 192
Y F+ AC+ L + G +H +FK G+ D+ + + LI MY KCG + +A +F+++
Sbjct: 134 TYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI 193
Query: 193 DEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
E+ SW+++I ++ A + L M EG + +E TLVS+L AC HLG G
Sbjct: 194 TERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEG-FEPDERTLVSMLGACSHLGDLRTG 252
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
R + + + L+ + + LI MY K G ++ VF M +K R ++T MI+ S +
Sbjct: 253 RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQN 312
Query: 313 GHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQH 372
G +EA ++F E+ + G++PD VLSAC G + G Q + E ++ +
Sbjct: 313 GKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ-IETHASELSLQHNIYV 371
Query: 373 YGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+VD+ G+ G + EA + ++MP+K N+ W ++++A
Sbjct: 372 ATGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMITA 409
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 225/435 (51%), Gaps = 11/435 (2%)
Query: 37 LLKRCKSMEEFKQ-VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPG 95
LL+ C S+ V H L + + G + A G E A +F ++ +
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 96 S--FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
S F +N++I G + G+ PD F +P +LKAC +G V+ G I
Sbjct: 158 SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
H + K G G D++V N L+ MY KCG I A +VF+ + K SW++++ + +
Sbjct: 218 HRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLL 277
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
H+ L + M + G E V++ S + S GR +HG ++R E + V +
Sbjct: 278 HEALDIFRLMVQNG----IEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANA 333
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
LI +Y K G + + +F M E+ S+ +IS H + L+ F ++ PD
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPD 390
Query: 334 DVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
+ +V VLS C++ G+V +G + F M E+ I P ++HY CMV+L GRAGM+ EAY +I
Sbjct: 391 GITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMI 450
Query: 394 -KSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKW 452
+ M ++ VW +LL AC +H N +IGE+AA++LF L P+N ++ +L +Y++A +
Sbjct: 451 VQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRA 510
Query: 453 NDVARIRREMADKHL 467
DV R+R+ M D+ L
Sbjct: 511 EDVERVRQMMVDRGL 525
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 14/284 (4%)
Query: 133 IYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKM 192
I+ LL+ C L + G+++H + + +++ + + L+ +Y CG + A +VF++M
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 193 DEK--SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPN 250
++ S +W+++I +A + + L M+ +G + + T VL AC +GS
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG-VKPDRFTFPRVLKACGGIGSVQ 212
Query: 251 LGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLS 310
+G IH L++ +V V +L+ MY K G I K VF + K S+ M++G
Sbjct: 213 IGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL 272
Query: 311 IHGHGAEALQVFSEILEEGLAPDDVVYVGVLS---ACSHAGLVNEGLQCFKNMQFEHKIK 367
HG EAL +F +++ G+ PD V VL+ + H G G + M++E +
Sbjct: 273 HHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH-GRQLHGWVIRRGMEWELSVA 331
Query: 368 PTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
++ L + G L +A + M ++ + V W +++SA
Sbjct: 332 ------NALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISA 368
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 218/448 (48%), Gaps = 11/448 (2%)
Query: 36 PLLKRCKSMEEFKQVHAHV--LKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
P+ K +E + VH V +LG D N + L K G M+ A +F ++E
Sbjct: 226 PVCGHLKDLEMGRNVHKLVEEKRLG---DKIEVKNALVNMYL-KCGRMDEARFVFDRMER 281
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+ MI G + G+ P+ L+ C V +G +
Sbjct: 282 RDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL 341
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
HG + V DI ++ LISMY KC + VF + WSAII E+
Sbjct: 342 HGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELV 401
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS 273
L L M RE +TL S+L A L IH L + ++ T
Sbjct: 402 SDALGLFKRMRRE-DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG 460
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM----ISGLSIHGHGAEALQVFSEILEEG 329
L+ +Y K G +E +F + EK + V+ ISG +HG G ALQVF E++ G
Sbjct: 461 LVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG 520
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
+ P+++ + L+ACSH+GLV EGL F+ M +K HY C+VDLLGRAG L EA
Sbjct: 521 VTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEA 580
Query: 390 YGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARA 449
Y LI ++P +P VW +LL+AC H N+++GE+AA KLF L P N G+Y++LAN+YA
Sbjct: 581 YNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAAL 640
Query: 450 HKWNDVARIRREMADKHLVQTPGFSMVE 477
+W D+ ++R M + L + PG S +E
Sbjct: 641 GRWKDMEKVRSMMENVGLRKKPGHSTIE 668
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 153/314 (48%), Gaps = 6/314 (1%)
Query: 42 KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNT 101
+S+ + K +H HV+ G S L T AL G + YA +F ++ + YN
Sbjct: 29 QSISKTKALHCHVITGGRVSGHIL-STLSVTYALC--GHITYARKLFEEMPQSSLLSYNI 85
Query: 102 MIRGNVSIMNXXXXXXXXXXXXXXGIG--PDNFIYPFLLKACSLLGGVKEGIQIHGHVFK 159
+IR V G+ PD + YPF+ KA L +K G+ +HG + +
Sbjct: 86 VIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILR 145
Query: 160 AGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLML 219
+ G D +VQN L++MY G ++ A DVF+ M + V SW+ +I + + LM+
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMM 205
Query: 220 LGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYV 279
M E + +T+VS+L C HL +GR +H ++ + VK +L++MY+
Sbjct: 206 FDWMVNES-VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYL 264
Query: 280 KSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVG 339
K G +++ VF M + ++T MI+G + G AL++ + EG+ P+ V
Sbjct: 265 KCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIAS 324
Query: 340 VLSACSHAGLVNEG 353
++S C A VN+G
Sbjct: 325 LVSVCGDALKVNDG 338
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 216/383 (56%), Gaps = 3/383 (0%)
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
P +F +N ++R + + + PD + P ++KA + G ++
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
H + G D F ++G I++Y K G ++A VF++ E+ + SW+AIIG A
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 214 HQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISE--LNVVVK 271
++ + + DM R G ++ T+VSV ++C LG +L +H +L+ +E ++++
Sbjct: 200 NEAVEMFVDMKRSG-LEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML 258
Query: 272 TSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLA 331
SLIDMY K G ++ +F+ M +++ S++ MI G + +G+ EAL+ F ++ E G+
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 332 PDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYG 391
P+ + +VGVLSAC H GLV EG F M+ E +++P + HYGC+VDLL R G L+EA
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 392 LIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHK 451
+++ MP+KPN +VW L+ C+ ++E+ E A + L P N G Y+VLAN+YA
Sbjct: 379 VVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGM 438
Query: 452 WNDVARIRREMADKHLVQTPGFS 474
W DV R+R+ M K + + P +S
Sbjct: 439 WKDVERVRKLMKTKKVAKIPAYS 461
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 6/253 (2%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
K++H+ ++LGF D FC S + K G E A +F + E +N +I G
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITL--YCKAGEFENARKVFDENPERKLGSWNAIIGGLN 194
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGD--D 165
G+ PD+F + +C LG + Q+H V +A + D
Sbjct: 195 HAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSD 254
Query: 166 IFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSR 225
I + N LI MYGKCG + A +FE+M +++V SWS++I +A + L M R
Sbjct: 255 IMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM-R 313
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS-ELNVVVKTSLIDMYVKSGCI 284
E R + T V VLSAC+H G G+ ++ E + ++D+ + G +
Sbjct: 314 EFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQL 373
Query: 285 EKGVCVFQNMAEK 297
++ V + M K
Sbjct: 374 KEAKKVVEEMPMK 386
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 244/477 (51%), Gaps = 24/477 (5%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGN- 106
+Q+H +K G+ +S + +K G +E S+F Q+ E + TMI N
Sbjct: 296 RQIHGLCIKRGY--ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK 353
Query: 107 ---VSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
VSI G+ P+ + L+ A +KEG++IHG K G
Sbjct: 354 DDAVSIF---------LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFV 404
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
+ V N I++Y K A++ A FE + + + SW+A+I A H+ L + +
Sbjct: 405 SEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--L 462
Query: 224 SREGHWRAEESTLVSVLSACIHLG--SPNLGRCIHGILLRNISELNVVVKTSLIDMYVKS 281
S E T SVL+A S G+ H LL+ VV ++L+DMY K
Sbjct: 463 SAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKR 522
Query: 282 GCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVL 341
G I++ VF M++K++F +T +IS S HG + +F ++++E +APD V ++ VL
Sbjct: 523 GNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVL 582
Query: 342 SACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPN 401
+AC+ G+V++G + F M + ++P+ +HY CMVD+LGRAG L+EA L+ +P P
Sbjct: 583 TACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPG 642
Query: 402 DVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRRE 461
+ + +S+L +C++H N+++G AE + P G Y+ + N+YA +W+ A IR+
Sbjct: 643 ESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKA 702
Query: 462 MADKHLVQTPGFSMV-----EAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEG 513
M K++ + GFS + E + F S D+S P+ D IY M+ + ++ EG
Sbjct: 703 MRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 214/507 (42%), Gaps = 64/507 (12%)
Query: 38 LKRCK-SMEEFKQVHAHVLKLGFFCDSF-CGSNLVATCALAKWGSMEYACSIFRQIEEPG 95
LK C+ ++ Q+H GF SF C SN V K G + A IF + +P
Sbjct: 85 LKACRGDLKRGCQIHGFSTTSGF--TSFVCVSNAVMGM-YRKAGRFDNALCIFENLVDPD 141
Query: 96 SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
+NT++ G + G+ D F Y L C G G+Q+
Sbjct: 142 VVSWNTILSG---FDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII-GAHACAEMWH 214
V K G+ D+ V N I+MY + G+ + A VF++M K + SW++++ G
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 258
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
+ +++ DM REG + + SV++ C H L R IHG+ ++ E + V L
Sbjct: 259 EAVVIFRDMMREG-VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNIL 317
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
+ Y K G +E VF M+E++ S+T MIS + +A+ +F + +G+ P++
Sbjct: 318 MSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNE 372
Query: 335 VVYVGVLSACSHAGLVNEGLQ----CFKN--------------------------MQFEH 364
V +VG+++A + EGL+ C K FE
Sbjct: 373 VTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFED 432
Query: 365 KIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK--PNDVVWRSLLSACKVHLNLEI-- 420
+ + M+ + G EA + S + PN+ + S+L+A ++ +
Sbjct: 433 ITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQ 492
Query: 421 GEIAAEKLFMLNPNN-PGDYLVLANMYARAHKWNDVARIRREMADKH-LVQTPGFSMVEA 478
G+ L L N+ P L +MYA+ ++ ++ EM+ K+ V T
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTS------- 545
Query: 479 ERKVYKFVSQDRSQPEFDTIYNMIHQM 505
+S S +F+T+ N+ H+M
Sbjct: 546 ------IISAYSSHGDFETVMNLFHKM 566
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 239/459 (52%), Gaps = 14/459 (3%)
Query: 20 PQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDS-FCGSNLVATCALAKW 78
P +S NE G L+ + K+ H V++ F DS C S L C K+
Sbjct: 329 PDGVVISCLINELGKMMLVPQGKAF------HGFVIRHCFSLDSTVCNSLLSMYC---KF 379
Query: 79 GSMEYACSIFRQIEEPGSFE-YNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFL 137
+ A +F +I E G+ E +NTM++G + GI D+ +
Sbjct: 380 ELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSV 439
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV 197
+ +CS +G V G +H +V K + I V N LI +YGK G + A +F + D +V
Sbjct: 440 ISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNV 498
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
+W+A+I ++ E + + L M E +++ TLV++L AC++ GS G+ IH
Sbjct: 499 ITWNAMIASYVHCEQSEKAIALFDRMVSE-NFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 258 ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAE 317
+ E+N+ + +LIDMY K G +EK +F +K + VMISG +HG
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVES 617
Query: 318 ALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMV 377
A+ +F ++ E + P ++ +LSAC+HAGLV +G + F M ++ +KP ++HY C+V
Sbjct: 618 AIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLV 676
Query: 378 DLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPG 437
DLL R+G L EA + SMP P+ V+W +LLS+C H E+G AE+ +P N G
Sbjct: 677 DLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDG 736
Query: 438 DYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMV 476
Y++LANMY+ A KW + R R M + + + G S+V
Sbjct: 737 YYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 166/370 (44%), Gaps = 6/370 (1%)
Query: 43 SMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTM 102
S+E ++ +A ++ G + F S L+++ A +G + +F + F +N++
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISS--YASYGKPNLSSRVFHLVTRRDIFLWNSI 96
Query: 103 IRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGV 162
I+ + S + G PD+F P ++ AC+ L G +HG V K G
Sbjct: 97 IKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGG 156
Query: 163 GD-DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLG 221
D + V + Y KCG ++ AC VF++M ++ V +W+AII H L L
Sbjct: 157 FDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLC 216
Query: 222 DMSREGHW--RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYV 279
M G + TL AC +LG+ GRC+HG ++N + V++S+ Y
Sbjct: 217 KMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYS 276
Query: 280 KSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVG 339
KSG + F+ + ++ FS+T +I+ L+ G E+ +F E+ +G+ PD VV
Sbjct: 277 KSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISC 336
Query: 340 VLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK 399
+++ LV +G + F H ++ + + +L A L + +
Sbjct: 337 LINELGKMMLVPQG-KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEE 395
Query: 400 PNDVVWRSLL 409
N W ++L
Sbjct: 396 GNKEAWNTML 405
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 223/429 (51%), Gaps = 4/429 (0%)
Query: 50 VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSI 109
+H +K G D + +LV A+ G+ME A +F +I S + +++G +
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEM--YAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 110 MNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG-HVFKAGVGDDIFV 168
G+ D L+KAC + K G +HG + ++ + ++
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGH 228
Q +I MY KC + +A +FE +++V W+ +I A E + L M RE
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 229 WRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGV 288
+ TL ++L +C LGS G+ +HG ++RN E++ V TS IDMY + G I+
Sbjct: 309 L-PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 289 CVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAG 348
VF M E++ S++ MI+ I+G EAL F ++ + + P+ V +V +LSACSH+G
Sbjct: 368 TVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
Query: 349 LVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSL 408
V EG + F++M ++ + P +HY CMVDLLGRAG + EA I +MP+KP W +L
Sbjct: 428 NVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 409 LSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLV 468
LSAC++H +++ AEKL + P Y++L+N+YA A W V +RR+M K
Sbjct: 488 LSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYR 547
Query: 469 QTPGFSMVE 477
+ G S E
Sbjct: 548 KHVGQSATE 556
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 181/380 (47%), Gaps = 10/380 (2%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE--EP 94
+L + K++ +QVHA V+ GF + GS+L T A + +++A S F +I +
Sbjct: 13 ILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSL--TNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 95 GSFEYNTMIRGNVSIMN--XXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQ 152
+NT++ G G D+F F +KAC LG ++ GI
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEM 212
IHG K G+ D +V L+ MY + G ++ A VF+++ ++ W ++ +
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGI-LLRNISELNVVVK 271
+ L M R+ + TL+ ++ AC ++ + +G+C+HG+ + R+ + + ++
Sbjct: 191 DPEVFRLFCLM-RDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 272 TSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLA 331
S+IDMYVK ++ +F+ +++ +T +ISG + EA +F ++L E +
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL 309
Query: 332 PDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYG 391
P+ +L +CS G + G + + I+ ++ +D+ R G ++ A
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHG-KSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 392 LIKSMPIKPNDVVWRSLLSA 411
+ MP + N + W S+++A
Sbjct: 369 VFDMMP-ERNVISWSSMINA 387
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 237/465 (50%), Gaps = 41/465 (8%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
K++HA ++K GF D L+ K G + YA +F ++ +P YN MI G +
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLL--ILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQ-----IHGHVFKAGV 162
G D + +LKA + G + +H + K V
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 163 GDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII------------------ 204
D + L+ Y K G ++ A VFE M +++V +++I
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 205 --------------GAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPN 250
G E + + + M R G + ST SV+ AC L S
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAG-FHPNISTFASVIGACSVLTSHE 290
Query: 251 LGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLS 310
+G+ +H ++++ ++ + +SL+DMY K G I VF M EK+ FS+T MI G
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 311 IHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTV 370
+G+ EAL++F+ + E + P+ V ++G LSACSH+GLV++G + F++MQ ++ +KP +
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 371 QHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFM 430
+HY C+VDL+GRAG L +A+ ++MP +P+ +W +LLS+C +H N+E+ IAA +LF
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Query: 431 LNPNN-PGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFS 474
LN + PG YL L+N+YA KW++V++IR M + + +T G S
Sbjct: 471 LNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 150/331 (45%), Gaps = 53/331 (16%)
Query: 148 KEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAH 207
K G +IH + K G D+ + L+ ++ KCG + +A VF+++ + ++++++ +I +
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 208 ACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSP-----NLGRCIHGILLRN 262
+ + L+L+ MS G +A+ TL VL A GS +L R +H +++
Sbjct: 111 LKHGLVKELLLLVQRMSYSGE-KADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKC 169
Query: 263 ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVF 322
EL+ V+ T+L+D YVKSG +E VF+ M +++ T MISG G +A ++F
Sbjct: 170 DVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIF 229
Query: 323 SEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGR 382
+ D VVY ++ S +G K +V Y M R
Sbjct: 230 NTT----KVKDIVVYNAMVEGFSRSG---------------ETAKRSVDMYISM----QR 266
Query: 383 AGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYL-- 440
AG PN + S++ AC V + E+G+ ++ G Y
Sbjct: 267 AG-------------FHPNISTFASVIGACSVLTSHEVGQQVHAQIM-----KSGVYTHI 308
Query: 441 ----VLANMYARAHKWNDVARIRREMADKHL 467
L +MYA+ ND R+ +M +K++
Sbjct: 309 KMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 214/381 (56%), Gaps = 6/381 (1%)
Query: 127 IGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHAC 186
I PD F + AC G V G QIHGHV + V D+ FVQN LI MY K G++ A
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSAS 459
Query: 187 DVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHL 246
VF ++ +SV +W++++ + + + L D + E T ++V+ AC +
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF-DYMYHSYLEMNEVTFLAVIQACSSI 518
Query: 247 GSPNLGRCIHGILLRNISEL-NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
GS G+ +H L+ IS L ++ T+LIDMY K G + VF+ M+ +S S++ M
Sbjct: 519 GSLEKGKWVHHKLI--ISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSM 576
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
I+ +HG A+ F++++E G P++VV++ VLSAC H+G V EG F N+
Sbjct: 577 INAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFG 635
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAA 425
+ P +H+ C +DLL R+G L+EAY IK MP + VW SL++ C++H ++I +
Sbjct: 636 VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIK 695
Query: 426 EKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKF 485
L + ++ G Y +L+N+YA +W + R+R M +L + PG+S +E ++KV++F
Sbjct: 696 NDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRF 755
Query: 486 VSQDRSQPEFDTIYNMIHQME 506
+ + ++ + D IY + ++
Sbjct: 756 GAGEENRIQTDEIYRFLGNLQ 776
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 185/385 (48%), Gaps = 18/385 (4%)
Query: 34 WYPLLKRCKSMEEFKQVHAHVLKLGFFC-DSFCGSNLVATCALAKWGSMEYACSIFRQIE 92
+ PL + C S+ Q+HAH+L G D + L+ + A GS + + +F
Sbjct: 4 YMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAF--MGSPDSSRLVFEAFP 61
Query: 93 EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE--- 149
P SF Y +I+ NV F++P +L+AC+ G +E
Sbjct: 62 YPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA---GSREHLS 118
Query: 150 -GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHA 208
G ++HG + K GV DD ++ L+ MYG+ G + A VF+ M + + +WS ++ +
Sbjct: 119 VGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS-- 176
Query: 209 CAEMWH--QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISEL 266
C E + L + M +G + T++SV+ C LG + R +HG + R + +L
Sbjct: 177 CLENGEVVKALRMFKCMVDDG-VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 267 NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEIL 326
+ + SL+ MY K G + +F+ +A+K+ S+T MIS + +AL+ FSE++
Sbjct: 236 DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI 295
Query: 327 EEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG-CMVDLLGRAGM 385
+ G+ P+ V VLS+C GL+ EG + ++ P + +V+L G
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREG-KSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 386 LREAYGLIKSMPIKPNDVVWRSLLS 410
L + +++ + + N V W SL+S
Sbjct: 355 LSDCETVLRVVSDR-NIVAWNSLIS 378
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 171/363 (47%), Gaps = 9/363 (2%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
+VH ++K G D+ ++L+ C + G++ A +F + ++T++ +
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLL--CMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
G+ PD +++ C+ LG ++ +HG + + D +
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGH 228
N L++MY KCG + + +FEK+ +K+ SW+A+I ++ E + L +M + G
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG- 298
Query: 229 WRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNV-VVKTSLIDMYVKSGCIEKG 287
TL SVLS+C +G G+ +HG +R + N + +L+++Y + G +
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
V + +++++ ++ +IS + G +AL +F +++ + + PD +SAC +A
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV-WR 406
GLV G Q ++ VQ+ ++D+ ++G + A + IK VV W
Sbjct: 419 GLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQ--IKHRSVVTWN 474
Query: 407 SLL 409
S+L
Sbjct: 475 SML 477
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 133/296 (44%), Gaps = 8/296 (2%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
KQ+H HV++ D F ++L+ +K GS++ A ++F QI+ +N+M+ G
Sbjct: 425 KQIHGHVIRTDV-SDEFVQNSLIDM--YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
N + + + +++ACS +G +++G +H + +G+ D+F
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLF 540
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
LI MY KCG + A VF M +S+ SWS++I A+ + M G
Sbjct: 541 TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG 600
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
+ E ++VLSAC H GS G+ ++ N ID+ +SG +++
Sbjct: 601 T-KPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEA 659
Query: 288 VCVFQNMAEKSRFS-YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLS 342
+ M + S + +++G IH + ++ L + + DD Y +LS
Sbjct: 660 YRTIKEMPFLADASVWGSLVNGCRIH-QKMDIIKAIKNDLSD-IVTDDTGYYTLLS 713
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 203/345 (58%), Gaps = 2/345 (0%)
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
N +I Y + G + +A +F+KM E+ + SW+A+I + L+ +M G
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG-V 202
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
+ + +++ L+AC +LG+ + G +H +L + NV V SLID+Y + GC+E
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGL 349
VF NM +++ S+ +I G + +G+ E+L F ++ E+G PD V + G L+ACSH GL
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL 322
Query: 350 VNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
V EGL+ F+ M+ +++I P ++HYGC+VDL RAG L +A L++SMP+KPN+VV SLL
Sbjct: 323 VEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLL 382
Query: 410 SACKVH-LNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLV 468
+AC H N+ + E + L LN + +Y++L+NMYA KW +++RR+M L
Sbjct: 383 AACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 442
Query: 469 QTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEG 513
+ PGFS +E + ++ F++ D + E I ++ + L +G
Sbjct: 443 KQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQG 487
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 16/227 (7%)
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLL 138
G ++ A +F ++ E + MI G V G+ PD L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 139 KACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVA 198
AC+ LG + G+ +H +V +++ V N LI +Y +CG ++ A VF M++++V
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 199 SWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGI 258
SW+++I A H+ L+ M +G ++ + T L+AC H+G G
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKG-FKPDAVTFTGALTACSHVGLVEEG------ 326
Query: 259 LLRNISELNVVVKTS--------LIDMYVKSGCIEKGVCVFQNMAEK 297
LR + + S L+D+Y ++G +E + + Q+M K
Sbjct: 327 -LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 267 NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEIL 326
N V ++ID Y++SG ++ +F M E+ S+T MI+G G+ EAL F E+
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQ 198
Query: 327 EEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGML 386
G+ PD V + L+AC++ G ++ GL + + K V+ ++DL R G +
Sbjct: 199 ISGVKPDYVAIIAALNACTNLGALSFGLWVHRYV-LSQDFKNNVRVSNSLIDLYCRCGCV 257
Query: 387 REAYGLIKSMPIKPNDVVWRSLL 409
A + +M K V W S++
Sbjct: 258 EFARQVFYNME-KRTVVSWNSVI 279
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 230/476 (48%), Gaps = 9/476 (1%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+E+ +H + KLG D + L+ AK GS++ A +F + YN MI
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDM--YAKNGSLKEAIKLFSLMPSKNVVTYNAMI 325
Query: 104 RG-----NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVF 158
G ++ G+ P + +LKACS ++ G QIH +
Sbjct: 326 SGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC 385
Query: 159 KAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLM 218
K D F+ + LI +Y G+ + F ++ +ASW+++I H E
Sbjct: 386 KNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFD 445
Query: 219 LLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMY 278
L + H R EE T+ ++SAC + + G I G +++ + VKTS I MY
Sbjct: 446 LFRQL-FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMY 504
Query: 279 VKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYV 338
KSG + VF + +Y+ MIS L+ HG EAL +F + G+ P+ ++
Sbjct: 505 AKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFL 564
Query: 339 GVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPI 398
GVL AC H GLV +GL+ F+ M+ +++I P +H+ C+VDLLGR G L +A LI S
Sbjct: 565 GVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGF 624
Query: 399 KPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARI 458
+ + V WR+LLS+C+V+ + IG+ AE+L L P G Y++L N+Y + + +
Sbjct: 625 QDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEV 684
Query: 459 RREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGY 514
R M D+ + + P S + + + F D S P IY M+ M+ ++F Y
Sbjct: 685 RELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMD-NVDFVDY 739
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 157/381 (41%), Gaps = 42/381 (11%)
Query: 83 YACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACS 142
+A +F ++ E +N++I G + + D F Y L C
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 143 LLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSA 202
+ G +HG V G+ +F+ N LI MY KCG + A +F++ DE+ SW++
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 203 IIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSAC---IHLGSPNLGRCIHGIL 259
+I + + L LL M R+G L SVL AC ++ G G IH
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDG-LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYT 278
Query: 260 LRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGL-----SIHGH 314
+ E ++VV+T+L+DMY K+G +++ + +F M K+ +Y MISG
Sbjct: 279 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA 338
Query: 315 GAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ-----CFKNMQ-------- 361
+EA ++F ++ GL P + VL ACS A + G Q C N Q
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398
Query: 362 -----------------FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK---SMPIKPN 401
F K + + M+D + L A+ L + S I+P
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458
Query: 402 DVVWRSLLSACKVHLNLEIGE 422
+ ++SAC L GE
Sbjct: 459 EYTVSLMMSACADFAALSSGE 479
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 236/489 (48%), Gaps = 50/489 (10%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATC----------ALAKWGSMEYACS 86
LLK C++++ Q HA + G + F +++ A A A + YA S
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 87 IFRQIEEPGSFEYNTMIR-GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLL- 144
+FR I P +F +NT+IR + + + PD +PF+ KAC+
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 145 -GGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYG-------------------------- 177
G + +H + G+ D+F N LI +Y
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 178 -----KCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAE 232
K I A ++F+ M + + SW+++I +A + + L +M G + +
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALG-LKPD 248
Query: 233 ESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQ 292
+VS LSAC G G+ IH R ++ + T L+D Y K G I+ + +F+
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 293 NMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNE 352
++K+ F++ MI+GL++HG+G + F +++ G+ PD V ++ VL CSH+GLV+E
Sbjct: 309 LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDE 368
Query: 353 GLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPND----VVWRSL 408
F M+ + + ++HYGCM DLLGRAG++ EA +I+ MP + + W L
Sbjct: 369 ARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGL 428
Query: 409 LSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREM-ADKHL 467
L C++H N+EI E AA ++ L+P + G Y V+ MYA A +W +V ++R + DK +
Sbjct: 429 LGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKV 488
Query: 468 VQTPGFSMV 476
+ GFS V
Sbjct: 489 KKNVGFSKV 497
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 233/461 (50%), Gaps = 6/461 (1%)
Query: 42 KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE--EPGSFEY 99
KS++ + +HA ++LG + ++T K G ++ A +F I+ + +
Sbjct: 167 KSLKLLEAMHAVGIRLGVDVQVTVANTWIST--YGKCGDLDSAKLVFEAIDRGDRTVVSW 224
Query: 100 NTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFK 159
N+M + PD + L +C + +G IH H
Sbjct: 225 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 160 AGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLML 219
G DI N ISMY K A +F+ M ++ SW+ +I +A + L L
Sbjct: 285 LGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALAL 344
Query: 220 LGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL-LRNISELNVVVKTSLIDMY 278
M + G + + TL+S++S C GS G+ I + NV++ +LIDMY
Sbjct: 345 FHAMIKSGE-KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMY 403
Query: 279 VKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYV 338
K G I + +F N EK+ ++T MI+G +++G EAL++FS++++ P+ + ++
Sbjct: 404 SKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFL 463
Query: 339 GVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPI 398
VL AC+H+G + +G + F M+ + I P + HY CMVDLLGR G L EA LI++M
Sbjct: 464 AVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSA 523
Query: 399 KPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARI 458
KP+ +W +LL+ACK+H N++I E AAE LF L P Y+ +AN+YA A W+ ARI
Sbjct: 524 KPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARI 583
Query: 459 RREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIY 499
R M +++ + PG S+++ K + F + E + IY
Sbjct: 584 RSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 166/366 (45%), Gaps = 6/366 (1%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
+ VHAH++K F+ D F G+ V K S++YA +F ++ E + +N M+ G
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDM--FVKCNSVDYAAKVFERMPERDATTWNAMLSGFC 129
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
+ I PD+ L+++ S +K +H + GV +
Sbjct: 130 QSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT 189
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMD--EKSVASWSAIIGAHACAEMWHQCLMLLGDMSR 225
V N IS YGKCG + A VFE +D +++V SW+++ A++ L M R
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR 249
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
E ++ + ST +++ ++C + + GR IH + ++ ++ + I MY KS
Sbjct: 250 E-EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTC 308
Query: 286 KGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS 345
+F M ++ S+TVMISG + G EAL +F +++ G PD V + ++S C
Sbjct: 309 SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 346 HAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVW 405
G + G + V ++D+ + G + EA + + P K V W
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK-TVVTW 427
Query: 406 RSLLSA 411
++++
Sbjct: 428 TTMIAG 433
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 140/332 (42%), Gaps = 36/332 (10%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G P+NF +PF+ KAC+ L V +H H+ K+ D+FV + M+ KC ++ +A
Sbjct: 47 GFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYA 106
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
VFE+M E+ +W+A++ + + L +M R + T+++++ +
Sbjct: 107 AKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM-RLNEITPDSVTVMTLIQSASF 165
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQ--NMAEKSRFSYT 303
S L +H + +R ++ V V + I Y K G ++ VF+ + +++ S+
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWN 225
Query: 304 VMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGL--------- 354
M S+ G +A ++ +L E PD ++ + ++C + + +G
Sbjct: 226 SMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHL 285
Query: 355 ---------------------QCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
C + F+ T + M+ G + EA L
Sbjct: 286 GTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALF 345
Query: 394 KSMPI---KPNDVVWRSLLSACKVHLNLEIGE 422
+M KP+ V SL+S C +LE G+
Sbjct: 346 HAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 3/201 (1%)
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
+ L+L +M R G + T V AC L +H L+++ +V V T+
Sbjct: 35 ESLLLFREMKR-GGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
+DM+VK ++ VF+ M E+ ++ M+SG GH +A +F E+ + PD
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
V + ++ + S + + L+ + + V + G+ G L A + +
Sbjct: 154 VTVMTLIQSASFEKSL-KLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFE 212
Query: 395 SMPIKPNDVV-WRSLLSACKV 414
++ VV W S+ A V
Sbjct: 213 AIDRGDRTVVSWNSMFKAYSV 233
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 207/357 (57%), Gaps = 12/357 (3%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ PD + +L AC L +K+G +IHG + G+G ++ V++ L+ MYGKCG+++ A
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREA 319
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLV---SVLSA 242
VF M +K+ SWSA++G + C H+ + ++ RE EE L +VL A
Sbjct: 320 RQVFNGMSKKNSVSWSALLGGY-CQNGEHEKAI---EIFRE----MEEKDLYCFGTVLKA 371
Query: 243 CIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSY 302
C L + LG+ IHG +R NV+V+++LID+Y KSGCI+ V+ M+ ++ ++
Sbjct: 372 CAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITW 431
Query: 303 TVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQF 362
M+S L+ +G G EA+ F++++++G+ PD + ++ +L+AC H G+V+EG F M
Sbjct: 432 NAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNL-EIG 421
+ IKP +HY CM+DLLGRAG+ EA L++ + + +W LL C + + +
Sbjct: 492 SYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVA 551
Query: 422 EIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEA 478
E A+++ L P Y++L+NMY + D IR+ M + + +T G S ++A
Sbjct: 552 ERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDA 608
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 191/419 (45%), Gaps = 42/419 (10%)
Query: 6 VLSQTHLLSLPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFK---QVHAHVLKLGFFCD 62
+L+ TH +P+TP + LL+ C + F Q HAHV+K G D
Sbjct: 48 ILNSTHSSEIPATPKL------------YASLLQTCNKVFSFIHGIQFHAHVVKSGLETD 95
Query: 63 SFCGSNLVATCALAKWG-SMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXX 121
G++L++ K G M +F + + +M+ G V+
Sbjct: 96 RNVGNSLLSL--YFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVE 153
Query: 122 XXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGA 181
G+ + F +KACS LG V+ G HG V G + F+ + L +YG
Sbjct: 154 MVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNRE 213
Query: 182 IKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
A VF++M E V W+A++ A + +++ + L L M R + ST +VL+
Sbjct: 214 PVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLT 273
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS 301
AC +L G+ IHG L+ N NVVV++SL+DMY K G + + VF M++K+ S
Sbjct: 274 ACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVS 333
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ------ 355
++ ++ G +G +A+++F E+ E+ D + VL AC+ V G +
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYV 389
Query: 356 ---CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
CF N+ E ++DL G++G + A + M I+ N + W ++LSA
Sbjct: 390 RRGCFGNVIVE----------SALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 246/486 (50%), Gaps = 50/486 (10%)
Query: 31 EQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSM---EYACSI 87
E+ LL + ++HAH+L+ GSNL+ ++ GS+ +YA +
Sbjct: 4 ERKLLRLLHGHNTRTRLPEIHAHLLR-----HFLHGSNLLLAHFISICGSLSNSDYANRV 58
Query: 88 FRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGV 147
F I+ P +N MI+ + GI D + Y LLK+CS L +
Sbjct: 59 FSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDL 118
Query: 148 KEGIQIHGHVFKAG--------------------VGD-----------DIFVQNGLISMY 176
+ G +HG + + G +GD ++ V N +I +
Sbjct: 119 RFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGF 178
Query: 177 GKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTL 236
G ++ +F++M E+S+ SW+++I + + + L L +M +G + +E+T+
Sbjct: 179 CDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG-FDPDEATV 237
Query: 237 VSVLSACIHLGSPNLGRCIHGI-----LLRNISELNVVVKTSLIDMYVKSGCIEKGVCVF 291
V+VL LG + G+ IH L ++ + V +L+D Y KSG +E +F
Sbjct: 238 VTVLPISASLGVLDTGKWIHSTAESSGLFKDF----ITVGNALVDFYCKSGDLEAATAIF 293
Query: 292 QNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG-LAPDDVVYVGVLSACSHAGLV 350
+ M ++ S+ +ISG +++G G + +F ++EEG +AP++ ++GVL+ CS+ G V
Sbjct: 294 RKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQV 353
Query: 351 NEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLS 410
G + F M K++ +HYG MVDL+ R+G + EA+ +K+MP+ N +W SLLS
Sbjct: 354 ERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLS 413
Query: 411 ACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQT 470
AC+ H ++++ E+AA +L + P N G+Y++L+N+YA +W DV ++R M L ++
Sbjct: 414 ACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKS 473
Query: 471 PGFSMV 476
G S +
Sbjct: 474 TGQSTI 479
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 231/468 (49%), Gaps = 47/468 (10%)
Query: 33 GWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAK--------------- 77
G +P L R ++ E K VH + ++GF D + ++ A +K
Sbjct: 210 GMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKK 269
Query: 78 ----WGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFI 133
W +M I+E G + ++ NV+++ IG
Sbjct: 270 NEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPV------------AIG----- 312
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
+L C+ G + G +H + KAG D+ VQN +IS Y K G++ CD F +
Sbjct: 313 --LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL---CDAFRQFS 367
Query: 194 E---KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPN 250
E K V S++++I + L +M G R + +TL+ VL+AC HL +
Sbjct: 368 EIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG-IRPDITTLLGVLTACSHLAALG 426
Query: 251 LGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLS 310
G HG + + +N + +L+DMY K G ++ VF M ++ S+ M+ G
Sbjct: 427 HGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFG 486
Query: 311 IHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM-QFEHKIKPT 369
IHG G EAL +F+ + E G+ PD+V + +LSACSH+GLV+EG Q F +M + + + P
Sbjct: 487 IHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR 546
Query: 370 VQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLF 429
+ HY CM DLL RAG L EAY + MP +P+ V +LLSAC + N E+G ++K+
Sbjct: 547 IDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQ 606
Query: 430 MLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVE 477
L ++L+N Y+ A +W D ARIR + L++TPG+S V+
Sbjct: 607 SLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 181/384 (47%), Gaps = 15/384 (3%)
Query: 40 RCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCAL-AKWGSMEYACSIFRQIEEP--GS 96
R +++ + +H H+LK S + LV L A +E A +F +I P
Sbjct: 11 RSRNLVLGQVIHQHLLKRSLTLSS--STVLVNLTRLYASCNEVELARHVFDEIPHPRINP 68
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGH 156
++ MIR S G+ P + YPF+LKAC+ L + +G IH H
Sbjct: 69 IAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 157 VFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQC 216
V + D++V L+ Y KCG ++ A VF++M ++ + +W+A+I +
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDV 188
Query: 217 LMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLID 276
+ L DM R ST+V + A G+ G+ +HG R ++VVKT ++D
Sbjct: 189 IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILD 248
Query: 277 MYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEIL-EEGLAPDDV 335
+Y KS CI VF +K+ +++ MI G + EA +VF ++L + +A
Sbjct: 249 VYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP 308
Query: 336 VYVG-VLSACSHAGLVNEG--LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL 392
V +G +L C+ G ++ G + C+ ++ + TVQ+ ++ + G L +A+
Sbjct: 309 VAIGLILMGCARFGDLSGGRCVHCYA-VKAGFILDLTVQN--TIISFYAKYGSLCDAFRQ 365
Query: 393 IKSMPIKPNDVV-WRSLLSACKVH 415
+ +K DV+ + SL++ C V+
Sbjct: 366 FSEIGLK--DVISYNSLITGCVVN 387
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 227/435 (52%), Gaps = 34/435 (7%)
Query: 76 AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYP 135
+K G +E A +F QI E + TMI G + G+ P +
Sbjct: 250 SKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMV 309
Query: 136 FLLKACSLLGGVKEGIQIHGHV-------------------------------FKAGVGD 164
LL A + G +G+Q+HG + F+A V D
Sbjct: 310 DLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKD 369
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
I +N LI+ + K G ++ A +VF++ +K + SW+A+I +A + L L +M
Sbjct: 370 HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
+ + T+VSV SA LGS G+ H L + N + ++IDMY K G I
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSI 489
Query: 285 EKGVCVF---QNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVL 341
E + +F +N++ + + +I G + HGH AL ++S++ + P+ + +VGVL
Sbjct: 490 ETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVL 549
Query: 342 SACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPN 401
SAC HAGLV G F++M+ +H I+P ++HYGCMVDLLG+AG L EA +IK MP+K +
Sbjct: 550 SACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKAD 609
Query: 402 DVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRRE 461
++W LLSA + H N+EI E+AA +L ++P++ G ++L+N+YA A +W DVA +R E
Sbjct: 610 VMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREE 669
Query: 462 MADKHLVQTPGFSMV 476
M + + + FS V
Sbjct: 670 MRTRDVEWSRAFSGV 684
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/530 (20%), Positives = 189/530 (35%), Gaps = 132/530 (24%)
Query: 30 NEQGWYPLLKRCKSMEEF---KQVHAHVLKLGFFCDSF-CGS--NLVATCAL-------- 75
E+ L C S + +Q+H VLK G + + C S N+ A C L
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 76 ---AKWGSMEY---------------ACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXX 117
AK S + A +F + E Y T+I+G
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 118 XXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYG 177
GI + ++ ACS LGG+ + + K + +FV L+ MY
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 219
Query: 178 KCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG--HW------ 229
C +K A +F++M E+++ +W+ ++ ++ A + Q L ++ + W
Sbjct: 220 LCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDG 279
Query: 230 ----------------------RAEESTLVSVLSACIHLGSPNLGRCIHGILLRN----- 262
+ E +V +LSA + G +HG +++
Sbjct: 280 CLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCY 339
Query: 263 --------------------ISELNVVVK------TSLIDMYVKSGCIEKGVCVFQNMAE 296
+ + VK +LI +VK+G +E+ VF +
Sbjct: 340 DFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD 399
Query: 297 KSRFSYTVMISGLSIHGHGAEALQVFSEILEEG-LAPDDVVYVGVLSACSHAGLVNEGLQ 355
K FS+ MISG + AL +F E++ + PD + V V SA S G + EG +
Sbjct: 400 KDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKR 459
Query: 356 CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA-------------------------- 389
+ F I P ++D+ + G + A
Sbjct: 460 AHDYLNFS-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSA 518
Query: 390 -----------YGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKL 428
Y ++S+PIKPN + + +LSAC +E+G+ E +
Sbjct: 519 THGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESM 568
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 161/439 (36%), Gaps = 129/439 (29%)
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV--------- 188
L +C+ V G QIH V K+G+ + ++ N +++MY KC + A V
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 189 ----------------------FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSRE 226
F+ M E+S S++ +I +A W + + L +M
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 227 GHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYV------- 279
G E TL +V+SAC HLG R + + ++ E V V T+L+ MY
Sbjct: 168 G-IMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKD 226
Query: 280 ------------------------KSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHG 315
K+G IE+ +F + EK S+ MI G
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQL 286
Query: 316 AEALQVFSEILEEGLAPDDVVYVGVLSACS-----------HAGLVNEGLQCFKNM---- 360
EAL ++E+L G+ P +V+ V +LSA + H +V G C+ +
Sbjct: 287 DEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATI 346
Query: 361 ---------------QFEHKIKPTVQHYGCMVDLLGRAGMLREA---------------- 389
QFE +K + ++ + GM+ +A
Sbjct: 347 IHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWN 406
Query: 390 -----YG--------------LIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKL-F 429
Y +I S +KP+ + S+ SA +LE G+ A + L F
Sbjct: 407 AMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNF 466
Query: 430 MLNPNNPGDYLVLANMYAR 448
P N + +MYA+
Sbjct: 467 STIPPNDNLTAAIIDMYAK 485
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 230/455 (50%), Gaps = 3/455 (0%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+E + +H ++K GF D + L+ K G E + + I + MI
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITM--YLKCGKEEASYRVLETIPNKDVVCWTVMI 318
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
G + + G + ++ +C+ LG G +HG+V + G
Sbjct: 319 SGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYT 378
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM 223
D N LI+MY KCG + + +FE+M+E+ + SW+AII +A + L+L +M
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Query: 224 SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC 283
+ + + T+VS+L AC G+ +G+ IH I++R+ +V T+L+DMY K G
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGY 498
Query: 284 IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+E F +++ K S+ ++I+G HG G AL+++SE L G+ P+ V+++ VLS+
Sbjct: 499 LEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Query: 344 CSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV 403
CSH G+V +GL+ F +M + ++P +H C+VDLL RA + +A+ K +P+
Sbjct: 559 CSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSID 618
Query: 404 VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMA 463
V +L AC+ + E+ +I E + L P + G Y+ L + +A +W+DV+ +M
Sbjct: 619 VLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMR 678
Query: 464 DKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTI 498
L + PG+S +E K F S + DT+
Sbjct: 679 SLGLKKLPGWSKIEMNGKTTTFFMNHTSHSD-DTV 712
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 174/388 (44%), Gaps = 17/388 (4%)
Query: 37 LLKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
LLK C S++ +H VL GF D + S+LV AK+G + +A +F ++ E
Sbjct: 52 LLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL--YAKFGLLAHARKVFEEMRE 109
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+ MI GI P P L +L GV E Q+
Sbjct: 110 RDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG----PVTL--LEMLSGVLEITQL 163
Query: 154 ---HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACA 210
H G DI V N ++++Y KC + A D+F++M+++ + SW+ +I +A
Sbjct: 164 QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Query: 211 EMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVV 270
+ L LL M +G R ++ T + LS + +GR +H +++ ++++ +
Sbjct: 224 GNMSEILKLLYRMRGDG-LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHL 282
Query: 271 KTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGL 330
KT+LI MY+K G E V + + K +TVMISGL G +AL VFSE+L+ G
Sbjct: 283 KTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGS 342
Query: 331 APDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAY 390
V+++C+ G + G H ++ + + G L ++
Sbjct: 343 DLSSEAIASVVASCAQLGSFDLG-ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSL 401
Query: 391 GLIKSMPIKPNDVVWRSLLSACKVHLNL 418
+ + M + + V W +++S +++L
Sbjct: 402 VIFERMN-ERDLVSWNAIISGYAQNVDL 428
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 4/214 (1%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
PD F +P LLKAC+ L + G+ IH V G D ++ + L+++Y K G + HA V
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKV 103
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
FE+M E+ V W+A+IG ++ A + + L+ +M +G + TL+ +LS + +
Sbjct: 104 FEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQG-IKPGPVTLLEMLSGVLEITQ 162
Query: 249 PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISG 308
+C+H + + ++ V S++++Y K + +F M ++ S+ MISG
Sbjct: 163 L---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 309 LSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLS 342
+ G+ +E L++ + +GL PD + LS
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 210/369 (56%), Gaps = 16/369 (4%)
Query: 130 DNFIYPFLLKACSLLGGVK-EGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
D+F F +K S +G QIH V K G I +Q L+ Y G + +A V
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 189 FEKMDEK-SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSV-LSACIHL 246
F++ EK ++ W+A+I A+ E + + L M E + +V+V LSAC L
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM--EAEKIELDGVIVTVALSACADL 180
Query: 247 GSPNLGRCIHGILLRNISEL--NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
G+ +G I+ ++ L ++ ++ SL++MYVKSG EK +F K +YT
Sbjct: 181 GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTS 240
Query: 305 MISGLSIHGHGAEALQVFSEI------LEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFK 358
MI G +++G E+L++F ++ + + P+DV ++GVL ACSH+GLV EG + FK
Sbjct: 241 MIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFK 300
Query: 359 NMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNL 418
+M ++ +KP H+GCMVDL R+G L++A+ I MPIKPN V+WR+LL AC +H N+
Sbjct: 301 SMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNV 360
Query: 419 EIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEA 478
E+GE ++F L+ ++ GDY+ L+N+YA W++ +++R + + + PG S +E
Sbjct: 361 ELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM---PGKSWIEL 417
Query: 479 ERKVYKFVS 487
+ +FVS
Sbjct: 418 GSIINEFVS 426
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 21/319 (6%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFE-YNTMIRGN 106
+Q+HA V KLGF ++LV + G ++YA +F + E + + MI
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVG--FYSSVGDVDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 107 VSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAG--VGD 164
N I D I L AC+ LG V+ G +I+ K +
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLG--- 221
D+ ++N L++MY K G + A +F++ K V +++++I +A + L L
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 222 --DMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS----LI 275
D S++ + T + VL AC H G G+ + I + N+ + + ++
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSM---IMDYNLKPREAHFGCMV 319
Query: 276 DMYVKSGCIEKGVCVFQNMAEK-SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
D++ +SG ++ M K + + ++ S+HG+ +V I E L D
Sbjct: 320 DLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFE--LDRDH 377
Query: 335 V-VYVGVLSACSHAGLVNE 352
V YV + + + G+ +E
Sbjct: 378 VGDYVALSNIYASKGMWDE 396
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 251/510 (49%), Gaps = 38/510 (7%)
Query: 36 PLLKRCKSMEEFKQVHAHVLKLGFFC-DSFCGSNLVATCALAKWGSMEYACSIFRQIEEP 94
P+ + + K++H+++L+ + D+ G+ L++ A++G A F +
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISF--YARFGDTSAAYWAFSLMSTK 395
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIH 154
+N ++ I D+ LLK C + G+ + ++H
Sbjct: 396 DIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVH 455
Query: 155 GHVFKAGVGDD---IFVQNGLISMYGKCGAIKHACDVFEKMDEK-SVASWSAIIGAHACA 210
G+ KAG+ D + N L+ Y KCG +++A +F + E+ ++ S+++++ + +
Sbjct: 456 GYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNS 515
Query: 211 EMWHQCLMLLGDMSREG--HW----------------------------RAEESTLVSVL 240
ML +MS W R T++++L
Sbjct: 516 GSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLL 575
Query: 241 SACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRF 300
C L S +L R HG ++R ++ +K +L+D+Y K G ++ VFQ+ A +
Sbjct: 576 PVCAQLASLHLVRQCHGYIIRG-GLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLV 634
Query: 301 SYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM 360
+T M++G ++HG G EAL ++S + E + PD V +L+AC HAGL+ +GLQ + ++
Sbjct: 635 MFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI 694
Query: 361 QFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEI 420
+ H +KPT++ Y C VDL+ R G L +AY + MP++PN +W +LL AC + +++
Sbjct: 695 RTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDL 754
Query: 421 GEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAER 480
G A L ++ G++++++NMYA KW V +R M K + + G S +E +
Sbjct: 755 GHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDG 814
Query: 481 KVYKFVSQDRSQPEFDTIYNMIHQMEWQLE 510
+ FVS D S P D+I+++++ + Q++
Sbjct: 815 QRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 163/385 (42%), Gaps = 15/385 (3%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
++K C S+ + + +H V KLG S +++ AK M+ +FRQ++
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNM--YAKCRRMDDCQKMFRQMDS 84
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+N ++ G P + + +L C LG G +
Sbjct: 85 LDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSM 144
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAI-KHACDVFEKMDEKSVASWSAIIGAHACAEM 212
H ++ KAG+ D V N L+SMY K G I A F+ + +K V SW+AII + M
Sbjct: 145 HSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNM 204
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL----GRCIHG-ILLRNISELN 267
M +E +T+ +VL C + N+ GR IH ++ R+ + +
Sbjct: 205 MADAFRSFCLMLKEPT-EPNYATIANVLPVCASM-DKNIACRSGRQIHSYVVQRSWLQTH 262
Query: 268 VVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILE 327
V V SL+ Y++ G IE+ +F M K S+ V+I+G + + +A Q+F ++
Sbjct: 263 VFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVH 322
Query: 328 EG-LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGML 386
+G ++PD V + +L C+ + G + + + ++ R G
Sbjct: 323 KGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDT 382
Query: 387 REAYGLIKSMPIKPNDVVWRSLLSA 411
AY M K + + W ++L A
Sbjct: 383 SAAYWAFSLMSTK-DIISWNAILDA 406
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 8/315 (2%)
Query: 36 PLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSM-EYACSIFRQIEEP 94
PL R K +H++++K G D+ G+ LV+ AK+G + A + F I +
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSM--YAKFGFIFPDAYTAFDGIADK 187
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG---GVKEGI 151
+N +I G P+ +L C+ + + G
Sbjct: 188 DVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGR 247
Query: 152 QIHGHVF-KAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACA 210
QIH +V ++ + +FV N L+S Y + G I+ A +F +M K + SW+ +I +A
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 211 EMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISEL-NVV 269
W + L ++ +G + T++S+L C L G+ IH +LR+ L +
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS 367
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
V +LI Y + G F M+ K S+ ++ + + L + +L E
Sbjct: 368 VGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEA 427
Query: 330 LAPDDVVYVGVLSAC 344
+ D V + +L C
Sbjct: 428 ITLDSVTILSLLKFC 442
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 12/293 (4%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G G D+ ++ ++KAC+ + + G +HG VFK G V +++MY KC +
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
+F +MD W+ ++ + + + + M + T VL C+
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI-EKGVCVFQNMAEKSRFSYTV 304
LG G+ +H +++ E + +V +L+ MY K G I F +A+K S+
Sbjct: 135 LGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNA 194
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
+I+G S + A+A + F +L+E P+ VL C+ +++ + C Q
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS---MDKNIACRSGRQIHS 251
Query: 365 KI--KPTVQHY----GCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+ + +Q + +V R G + EA L M K + V W +++
Sbjct: 252 YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVIAG 303
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 238/493 (48%), Gaps = 37/493 (7%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRG-N 106
+QVH V++ GF D F G+ ++ K ++E A +F ++ E +N+MI G +
Sbjct: 152 RQVHGFVIRGGFDSDVFVGNGMITY--YTKCDNIESARKVFDEMSERDVVSWNSMISGYS 209
Query: 107 VSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDI 166
S P+ + +AC + G+++H + + + D+
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 167 FVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSRE 226
+ N +I Y KCG++ +A +F++M EK ++ AII + + + + L +M
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 227 G--HWRAEES----------------------------TLVSVLSACIHLGSPNLGRCIH 256
G W A S TL S+L + + + G+ IH
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
+RN ++ N+ V TS+ID Y K G + VF N ++S ++T +I+ ++HG
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 317 EALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCM 376
A +F ++ G PDDV VLSA +H+G + F +M ++ I+P V+HY CM
Sbjct: 450 SACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 377 VDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNP 436
V +L RAG L +A I MPI P VW +LL+ V +LEI A ++LF + P N
Sbjct: 510 VSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENT 569
Query: 437 GDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQD----RSQ 492
G+Y ++AN+Y +A +W + +R +M L + PG S +E E+ + F+++D RS+
Sbjct: 570 GNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSK 629
Query: 493 PEFDTIYNMIHQM 505
++ I ++ M
Sbjct: 630 EMYEIIEGLVESM 642
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 15/314 (4%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
Q+HA ++ D+F S L++ + A +F +I +F YN ++ S
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISF--YTRQDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 109 ------IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACS-----LLGGVKEGIQIHGHV 157
+ PD+ +LKA S LG + Q+HG V
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLAR--QVHGFV 158
Query: 158 FKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCL 217
+ G D+FV NG+I+ Y KC I+ A VF++M E+ V SW+++I ++ + + C
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 218 MLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDM 277
+ M ++ T++SV AC G +H ++ N ++++ + ++I
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGF 278
Query: 278 YVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
Y K G ++ +F M+EK +Y +ISG HG EA+ +FSE+ GL+ + +
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMI 338
Query: 338 VGVLSACSHAGLVN 351
G++ H ++N
Sbjct: 339 SGLMQNNHHEEVIN 352
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 15/276 (5%)
Query: 151 IQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACA 210
+Q+H + + D F+ + LIS Y + + A VF+++ ++ S++A++ A+
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 211 EMWHQCLMLL----------GDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILL 260
EM+ L D +R S ++ LS C +L R +HG ++
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISI--SCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 261 RNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQ 320
R + +V V +I Y K IE VF M+E+ S+ MISG S G + +
Sbjct: 160 RGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKK 219
Query: 321 VFSEILE-EGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDL 379
++ +L P+ V + V AC + + GL+ K M E+ I+ + ++
Sbjct: 220 MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKM-IENHIQMDLSLCNAVIGF 278
Query: 380 LGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
+ G L A L M K + V + +++S H
Sbjct: 279 YAKCGSLDYARALFDEMSEK-DSVTYGAIISGYMAH 313
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 196/350 (56%), Gaps = 17/350 (4%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
L A S LG + H K G+ D+ + LI MYGK G I A +F+ K
Sbjct: 233 FLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKD 292
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
V +W+ +I +A + +C+ LL M E + ST V +LS+C + + +GR +
Sbjct: 293 VVTWNCMIDQYAKTGLLEECVWLLRQMKYE-KMKPNSSTFVGLLSSCAYSEAAFVGRTVA 351
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
+L L+ ++ T+L+DMY K G +EK V +F M +K S+T MISG HG
Sbjct: 352 DLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAR 411
Query: 317 EALQVFSEILEEG--LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
EA+ +F+++ EE + P+++ ++ VL+ACSH GLV EG++CFK M + P V+HYG
Sbjct: 412 EAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYG 471
Query: 375 CMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPN 434
C+VDLLGRAG L EAY LI+++PI + WR+LL+AC+V+ N ++GE +L +
Sbjct: 472 CVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGET 531
Query: 435 NPGDYLVLANMYARAHKW-----NDVARIRREMADKHLVQTPGFSMVEAE 479
+P D ++LA +A A N++ + R+E G+S +E E
Sbjct: 532 HPADAILLAGTHAVAGNPEKSLDNELNKGRKE---------AGYSAIEIE 572
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 175/399 (43%), Gaps = 18/399 (4%)
Query: 19 PPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKW 78
PQC +L N+ L+ C+ E ++H +++K G D F S L+A ++
Sbjct: 25 SPQCQKL---IND------LRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL-- 73
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLL 138
+ YA SIF + F +NTMIRG G+ D F + L
Sbjct: 74 -DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTL 132
Query: 139 KACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK-SV 197
K+CS V G +HG ++G ++N LI Y CG I A VF++M +
Sbjct: 133 KSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDA 192
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
++S ++ + L L M R+ STL+S LSA LG + H
Sbjct: 193 VTFSTLMNGYLQVSKKALALDLFRIM-RKSEVVVNVSTLLSFLSAISDLGDLSGAESAHV 251
Query: 258 ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAE 317
+ ++ +L++ + T+LI MY K+G I +F K ++ MI + G E
Sbjct: 252 LCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEE 311
Query: 318 ALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMV 377
+ + ++ E + P+ +VG+LS+C+++ G + ++ E +I +V
Sbjct: 312 CVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVG-RTVADLLEEERIALDAILGTALV 370
Query: 378 DLLGRAGMLREAYGLIKSMPIKPNDV-VWRSLLSACKVH 415
D+ + G+L +A + M K DV W +++S H
Sbjct: 371 DMYAKVGLLEKAVEIFNRM--KDKDVKSWTAMISGYGAH 407
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/485 (30%), Positives = 238/485 (49%), Gaps = 21/485 (4%)
Query: 47 FKQVHAHVLKLGF-----FCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSF-EYN 100
KQVHA VLKLG C++ S A C GS+ A +F + +N
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISS--YADC-----GSVSDAKRVFDGLGGSKDLISWN 274
Query: 101 TMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKA 160
+MI G + D + Y LL ACS G +HG V K
Sbjct: 275 SMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKK 334
Query: 161 GVGDDIFVQNGLISMYGK--CGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLM 218
G+ N LISMY + G ++ A +FE + K + SW++II A + +
Sbjct: 335 GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVK 394
Query: 219 LLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMY 278
+ R + ++ ++L +C L + LG+ IH + ++ N V +SLI MY
Sbjct: 395 FFSYL-RSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMY 453
Query: 279 VKSGCIEKGVCVFQNMAEK-SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
K G IE FQ ++ K S ++ MI G + HG G +L +FS++ + + D V +
Sbjct: 454 SKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTF 513
Query: 338 VGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP 397
+L+ACSH GL+ EGL+ M+ +KI+P ++HY VDLLGRAG++ +A LI+SMP
Sbjct: 514 TAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMP 573
Query: 398 IKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVAR 457
+ P+ +V ++ L C+ +E+ A L + P + Y+ L++MY+ KW + A
Sbjct: 574 LNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKAS 633
Query: 458 IRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMI----HQMEWQLEFEG 513
+++ M ++ + + PG+S +E +V F ++DRS P IY MI +M+W G
Sbjct: 634 VKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQWLDSDNG 693
Query: 514 YKPDT 518
D+
Sbjct: 694 VDADS 698
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 188/462 (40%), Gaps = 45/462 (9%)
Query: 45 EEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIR 104
++ H + +K G D + + ++ + K+G + YA +F ++ + S +NTMI
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDS--YIKFGFLGYANMLFDEMPKRDSVSWNTMIS 74
Query: 105 GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGD 164
G S G D + + LLK + + G Q+HG V K G
Sbjct: 75 GYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
+++V + L+ MY KC ++ A + F+++ E + SW+A+I LLG M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
+ + T +L+ NL + +H +L+ + + + ++I Y G +
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 285 EKGVCVFQNM-AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
VF + K S+ MI+G S H A ++F ++ + D Y G+LSA
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 344 CS-----------HAGLVNEGLQCFKNMQ---------------------FEHKIKPTVQ 371
CS H ++ +GL+ + FE +
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Query: 372 HYGCMVDLLGRAGMLREA---YGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGE----IA 424
+ ++ + G+ +A + ++S IK +D + +LL +C L++G+ +A
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALA 434
Query: 425 AEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKH 466
+ F+ N +V MY++ + ++++ KH
Sbjct: 435 TKSGFVSNEFVISSLIV---MYSKCGIIESARKCFQQISSKH 473
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 237/486 (48%), Gaps = 37/486 (7%)
Query: 64 FCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXX 123
+ +N+V+ K G + A +F + E +NTM+ G N
Sbjct: 114 YSWNNMVS--GYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 124 XXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIK 183
GI + F + LL AC ++ Q HG V AG ++ + +I Y KCG ++
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 184 HACDVFEKMD-------------------------------EKSVASWSAIIGAHACAEM 212
A F++M EK+ SW+A+I +
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKT 272
++ L L M G + E+ T S L A + S G+ IHG ++R N +V +
Sbjct: 292 GNRALDLFRKMIALG-VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS 350
Query: 273 SLIDMYVKSGCIEKGVCVFQNMAEKSR-FSYTVMISGLSIHGHGAEALQVFSEILEEGLA 331
SLIDMY KSG +E VF+ +K + MIS L+ HG G +AL++ ++++ +
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 332 PDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYG 391
P+ V +L+ACSH+GLV EGL+ F++M +H I P +HY C++DLLGRAG +E
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMR 470
Query: 392 LIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHK 451
I+ MP +P+ +W ++L C++H N E+G+ AA++L L+P + Y++L+++YA K
Sbjct: 471 KIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGK 530
Query: 452 WNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEF--DTIYNMIHQMEWQL 509
W V ++R M + + + S +E E+KV F D S + IY ++H + +
Sbjct: 531 WELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVI 590
Query: 510 EFEGYK 515
E E +
Sbjct: 591 EEEASR 596
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 131/342 (38%), Gaps = 65/342 (19%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVG-DDIFVQNGLISMYGKCGAIKHACDVFEKM--- 192
LL+ C +K+G IH H+ G + + N LI MY KCG AC VF++M
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 193 ----------------------------DEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
E+ V SW+ ++ +A H+ L +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
R G + E + +L+AC+ L R HG +L NVV+ S+ID Y K G +
Sbjct: 172 RSG-IKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 285 EKGVCVFQNMA-------------------------------EKSRFSYTVMISGLSIHG 313
E F M EK+ S+T +I+G G
Sbjct: 231 ESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQG 290
Query: 314 HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHY 373
G AL +F +++ G+ P+ + L A + + G + M ++P
Sbjct: 291 SGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNAIVI 349
Query: 374 GCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
++D+ ++G L + + + K + V W +++SA H
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQH 391
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 260 LRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEAL 319
LRN+ N +++ YVKSG + + VF +M E+ S+ M+ G + G+ EAL
Sbjct: 110 LRNLYSWN-----NMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEAL 164
Query: 320 QVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGC-MVD 378
+ E G+ ++ + G+L+AC + + Q + + V C ++D
Sbjct: 165 WFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVV--LSCSIID 222
Query: 379 LLGRAGMLREAYGLIKSMPIKPNDV-VWRSLLSACKVHLNLEIGEIAAEKLFMLNP-NNP 436
+ G + A M +K D+ +W +L+S ++E AAEKLF P NP
Sbjct: 223 AYAKCGQMESAKRCFDEMTVK--DIHIWTTLISGYAKLGDME----AAEKLFCEMPEKNP 276
Query: 437 GDYLVLANMYARAHKWNDVARIRREM 462
+ L Y R N + R+M
Sbjct: 277 VSWTALIAGYVRQGSGNRALDLFRKM 302
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 195/350 (55%), Gaps = 2/350 (0%)
Query: 127 IGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHAC 186
+ PD+F P +L+ACS K G IH K G +FV + L+ MY G + HA
Sbjct: 130 VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHAR 189
Query: 187 DVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHL 246
+F+ M + ++A+ G + L + +M G + + +VS+L AC L
Sbjct: 190 KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSG-FALDSVVMVSLLMACGQL 248
Query: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMI 306
G+ G+ +HG +R S L + + ++ DMYVK ++ VF NM+ + S++ +I
Sbjct: 249 GALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLI 308
Query: 307 SGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKI 366
G + G + ++F E+L+EG+ P+ V ++GVLSAC+H GLV + F+ MQ E+ I
Sbjct: 309 LGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EYNI 367
Query: 367 KPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAE 426
P ++HY + D + RAG+L EA ++ MP+KP++ V ++LS CKV+ N+E+GE A
Sbjct: 368 VPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVAR 427
Query: 427 KLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMV 476
+L L P Y+ LA +Y+ A ++++ +R+ M +K + + PG S +
Sbjct: 428 ELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 157/547 (28%), Positives = 264/547 (48%), Gaps = 68/547 (12%)
Query: 32 QGWYP-------LLK---RCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSM 81
QG YP +LK R + + E ++VH + +K G DS+ ++L+ A G +
Sbjct: 40 QGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM--YASLGKI 97
Query: 82 EYACSIFRQIEEPGSFEYNTMIR---GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLL 138
E +F ++ + +N +I GN + + L
Sbjct: 98 EITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVST--L 155
Query: 139 KACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVA 198
ACS L ++ G +I+ V + + N L+ M+ KCG + A VF+ M +K+V
Sbjct: 156 SACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 199 SWSAIIGAHACAE------------------MW-------------HQCLMLLGDMSREG 227
W++++ + +W + L L M G
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAG 274
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
R + LVS+L+ C G+ G+ IHG + N ++ VV T+L+DMY K GCIE
Sbjct: 275 -IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETA 333
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
+ VF + E+ S+T +I GL+++G AL ++ E+ G+ D + +V VL+AC+H
Sbjct: 334 LEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHG 393
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDV---V 404
G V EG + F +M H ++P +H C++DLL RAG+L EA LI M + ++ V
Sbjct: 394 GFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPV 453
Query: 405 WRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMAD 464
+ SLLSA + + N++I E AEKL + ++ + +LA++YA A++W DV +RR+M D
Sbjct: 454 YCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKD 513
Query: 465 KHLVQTPGFSMVEAERKVYKFVSQDR--SQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVL 522
+ + PG S +E + ++F+ D S P+ D I +M+HQ T+ ++
Sbjct: 514 LGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQ-------------TTNLM 560
Query: 523 LDVDEDE 529
LD++ E
Sbjct: 561 LDLEHKE 567
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 40/353 (11%)
Query: 91 IEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEG 150
++ P YN M++ + G+ PDNF P +LK+ L V EG
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 151 IQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACA 210
++HG+ KAG+ D +V N L+ MY G I+ VF++M ++ V SW+ +I ++
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 211 EMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVV 270
+ + + MS+E + + +E T+VS LSAC L + +G I+ ++ E++V +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEF-EMSVRI 184
Query: 271 KTSLIDMYVKSGCIEKGVCVFQNMAEKS-------RFSY--------------------- 302
+L+DM+ K GC++K VF +M +K+ F Y
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 303 ---TVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEG--LQCF 357
T M++G EAL++F + G+ PD+ V V +L+ C+ G + +G + +
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 358 KNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV-WRSLL 409
N E+++ +VD+ + G + A + IK D W SL+
Sbjct: 305 IN---ENRVTVDKVVGTALVDMYAKCGCIETALEVF--YEIKERDTASWTSLI 352
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 214/402 (53%), Gaps = 1/402 (0%)
Query: 74 ALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFI 133
A + G +E IF I +P +N M+ G + + + PD
Sbjct: 359 ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTT 418
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEK-M 192
+L +C+ L ++ G QIHG V + + + + +GLI++Y +C ++ + +F+ +
Sbjct: 419 LSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCI 478
Query: 193 DEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
+E +A W+++I + + L+L M + E++ +VLS+C L S G
Sbjct: 479 NELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG 538
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
R HG+++++ + V+T+L DMY K G I+ F + K+ + MI G +
Sbjct: 539 RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHN 598
Query: 313 GHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQH 372
G G EA+ ++ +++ G PD + +V VL+ACSH+GLV GL+ +MQ H I+P + H
Sbjct: 599 GRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDH 658
Query: 373 YGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLN 432
Y C+VD LGRAG L +A L ++ P K + V+W LLS+C+VH ++ + AEKL L+
Sbjct: 659 YICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLD 718
Query: 433 PNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFS 474
P + Y++L+N Y+ +W+D A ++ M + +TPG S
Sbjct: 719 PQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 158/360 (43%), Gaps = 21/360 (5%)
Query: 77 KWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPF 136
K G + AC +F + E +N MI V G P F
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 137 LLKACS-LLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAI-KHACDVFEKMDE 194
+L ACS +L GV G++ HG K G+ +IFV N L+SMY KCG I + VFE + +
Sbjct: 144 VLSACSKVLDGVF-GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 195 KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS------ACIHLG- 247
+ S++A+IG A + + + M +G + + L ++LS C L
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKG-VQVDSVCLSNILSISAPREGCDSLSE 261
Query: 248 --SPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
LG+ IH + LR ++ + SL+++Y K+ + +F M E + S+ +M
Sbjct: 262 IYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
I G ++++ + + + G P++V + VL AC +G V G + F ++
Sbjct: 322 IVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP---- 377
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSACKVHLNLEIGE 422
+P+V + M+ EA + M +KP+ +LS+C LE G+
Sbjct: 378 -QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGK 436
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 2/179 (1%)
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
D++ N ++ K G + AC+VF+ M E+ V SW+ +I + L++ M
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
+G + TL SVLSAC + G HG+ ++ + N+ V +L+ MY K G I
Sbjct: 131 CDG-FLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 285 -EKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLS 342
+ GV VF+++++ + SYT +I GL+ EA+Q+F + E+G+ D V +LS
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 189/489 (38%), Gaps = 94/489 (19%)
Query: 10 THLLSLPSTPPQCSELSTRF-NEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSN 68
+++LS+ + C LS + NE G KQ+H L+LGF D ++
Sbjct: 244 SNILSISAPREGCDSLSEIYGNELG--------------KQIHCLALRLGFGGDLHLNNS 289
Query: 69 LVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIG 128
L+ AK M A IF ++ E +N MI G G
Sbjct: 290 LLEI--YAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 347
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
P+ +L AC G V+ G +I
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRI----------------------------------- 372
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
F + + SV++W+A++ ++ E + + + M + + + +++TL +LS+C L
Sbjct: 373 FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ-NLKPDKTTLSVILSSCARLRF 431
Query: 249 PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQN-MAEKSRFSYTVMIS 307
G+ IHG+++R N + + LI +Y + +E C+F + + E + MIS
Sbjct: 432 LEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMIS 491
Query: 308 GLSIHGHGAEALQVFSEILEEG-LAPDDVVYVGVLSACS-----------HAGLVNEGL- 354
G + +AL +F + + L P++ + VLS+CS H +V G
Sbjct: 492 GFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV 551
Query: 355 ------QCFKNMQ------------FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM 396
+M F+ ++ + M+ G G EA GL + M
Sbjct: 552 SDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM 611
Query: 397 PI---KPNDVVWRSLLSACK----VHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARA 449
KP+ + + S+L+AC V LEI + +++ + P Y+ + + RA
Sbjct: 612 ISSGEKPDGITFVSVLTACSHSGLVETGLEILS-SMQRIHGIEP-ELDHYICIVDCLGRA 669
Query: 450 HKWNDVARI 458
+ D ++
Sbjct: 670 GRLEDAEKL 678
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 239/459 (52%), Gaps = 19/459 (4%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACS--IFRQIEEP 94
L + K++ + KQ+HA ++ G +S G + C+ S +F + P
Sbjct: 14 LQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHP 73
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPF-LLKACSLLGGVKEGIQI 153
F +NT+++ + + + F++ + ++ G +
Sbjct: 74 DKFLFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIV 133
Query: 154 HGHVFKAG-VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAE- 211
HG V K G + + + L+ Y K G +++A VF++M E++ +W+A+IG + +
Sbjct: 134 HGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKD 193
Query: 212 ----MWHQCLMLLGDMSREGHW-RAEESTLVSVLSACIHLGSPNLGRCIHGIL--LRNIS 264
+ ++L S G R ++T+V VLSA G +G +HG + L
Sbjct: 194 KGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTP 253
Query: 265 ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSE 324
E++V + T+L+DMY K GC+ VF+ M K+ F++T M +GL+++G G E + +
Sbjct: 254 EVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNR 313
Query: 325 ILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAG 384
+ E G+ P+++ + +LSA H GLV EG++ FK+M+ + P ++HYGC+VDLLG+AG
Sbjct: 314 MAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAG 373
Query: 385 MLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLF-------MLNPNNPG 437
++EAY I +MPIKP+ ++ RSL +AC ++ +GE + L L+ +
Sbjct: 374 RIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECE 433
Query: 438 DYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMV 476
DY+ L+N+ A KW +V ++R+EM ++ + PG+S V
Sbjct: 434 DYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 214/422 (50%), Gaps = 37/422 (8%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNG-------------- 171
GI P+ F + ++ + + VK G Q+H + K G+ ++FV +
Sbjct: 88 GIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDA 147
Query: 172 -----------------LISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
LIS Y K + A +F M E+SV +W+A+IG +
Sbjct: 148 RRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNE 207
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISE-LNVVVKTS 273
+ + DM REG EST ++A ++ S G+ IH ++ + + NV V S
Sbjct: 208 EAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNS 267
Query: 274 LIDMYVKSGCIEKGVCVFQNMAEKSR--FSYTVMISGLSIHGHGAEALQVFSEILEE-GL 330
LI Y K G +E + F + E+ R S+ MI G + +G G EA+ +F +++++ L
Sbjct: 268 LISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNL 327
Query: 331 APDDVVYVGVLSACSHAGLVNEGLQCFKNM--QFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
P++V +GVL AC+HAGL+ EG F ++ ++HY CMVD+L R+G +E
Sbjct: 328 RPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKE 387
Query: 389 AYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYAR 448
A LIKSMP+ P W++LL C++H N + ++AA K+ L+P + Y++L+N Y+
Sbjct: 388 AEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSA 447
Query: 449 AHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQ 508
W +V+ IRR+M + L + G S +E ++ FV+ D++ D +Y M+ +
Sbjct: 448 MENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQH 507
Query: 509 LE 510
LE
Sbjct: 508 LE 509
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 39/337 (11%)
Query: 48 KQVHAHVLKLGFFCDSFCGS-------------------------NLVATCALA----KW 78
KQ+H + LK+G + F GS N+V+ L K
Sbjct: 113 KQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKK 172
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIG-PDNFIYPFL 137
E A S+FR + E +N +I G G+ P+ +P
Sbjct: 173 HEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCA 232
Query: 138 LKACSLLGGVKEGIQIHGHVFK-AGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDE-- 194
+ A S + G IH K G ++FV N LIS Y KCG ++ + F K++E
Sbjct: 233 ITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQ 292
Query: 195 KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRC 254
+++ SW+++I +A + + + M ++ + R T++ VL AC H G G
Sbjct: 293 RNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYM 352
Query: 255 IHGILLRNISELNVVV---KTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSY-TVMISGLS 310
+ + + N++ ++DM +SG ++ + ++M + ++ G
Sbjct: 353 YFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQ 412
Query: 311 IHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
IH + A S+ILE L P DV +LS A
Sbjct: 413 IHSNKRLAKLAASKILE--LDPRDVSSYVMLSNAYSA 447
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 23/258 (8%)
Query: 182 IKHACDVFEKMDEKSVASWSAIIGA------HACAEMWHQCLMLLGDMSREGHWRAEEST 235
I++A VF+++ E V S +A+IG H A + L+ LG R E T
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLG-------IRPNEFT 95
Query: 236 LVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA 295
+V+ + LG+ +H L+ NV V +++++ YVK + F +
Sbjct: 96 FGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR 155
Query: 296 EKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ 355
+ + S T +ISG EAL +F + E + V + V+ S G E +
Sbjct: 156 DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVN 211
Query: 356 CFKNMQFEHKIKPTVQHYGCMVDLLGR-----AGMLREAYGLIKSMPIKPNDVVWRSLLS 410
F +M E + P + C + + AG A IK + + N VW SL+S
Sbjct: 212 TFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACA-IKFLGKRFNVFVWNSLIS 270
Query: 411 ACKVHLNLEIGEIAAEKL 428
N+E +A KL
Sbjct: 271 FYSKCGNMEDSLLAFNKL 288
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 237/510 (46%), Gaps = 83/510 (16%)
Query: 37 LLKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
+LK C +E K Q+HA +L G CDS S+LV AK G + A + QI E
Sbjct: 193 VLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNV--YAKCGDLRMASYMLEQIRE 250
Query: 94 P----------------------GSFE---------YNTMIRGNVSIMNXXXXXXXXXXX 122
P G F+ +N+MI G ++ N
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIA-NNMKMEALVLFNE 309
Query: 123 XXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAI 182
D+ ++ AC LG ++ G Q+H H K G+ DDI V + L+ MY KCG+
Sbjct: 310 MRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSP 369
Query: 183 KHACD-------------------------------VFEKMDEKSVASWSAIIGA---HA 208
AC VFE+++ KS+ SW+++ +
Sbjct: 370 MEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNG 429
Query: 209 CA----EMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS 264
C E +HQ L D+ +E +L SV+SAC + S LG +
Sbjct: 430 CTVETLEYFHQMHKL--DLP------TDEVSLSSVISACASISSLELGEQVFARATIVGL 481
Query: 265 ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSE 324
+ + VV +SLID+Y K G +E G VF M + + MISG + +G G EA+ +F +
Sbjct: 482 DSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK 541
Query: 325 ILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAG 384
+ G+ P + ++ VL+AC++ GLV EG + F++M+ +H P +H+ CMVDLL RAG
Sbjct: 542 MSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAG 601
Query: 385 MLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLAN 444
+ EA L++ MP + +W S+L C + +G+ AAEK+ L P N Y+ L+
Sbjct: 602 YVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSA 661
Query: 445 MYARAHKWNDVARIRREMADKHLVQTPGFS 474
++A + W A +R+ M + ++ + PG S
Sbjct: 662 IFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 160/404 (39%), Gaps = 69/404 (17%)
Query: 70 VATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
V AK G + A +F + E N+++ G I+N
Sbjct: 129 VVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHG--YILNGYAEEALRLFKEL-NFSA 185
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
D +LKAC+ L +K G QIH + GV D + + L+++Y KCG ++ A +
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 190 EKMDEKSVASWSAIIGAHA------------------CAEMWH-------------QCLM 218
E++ E S SA+I +A C +W+ + L+
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 219 LLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH------GI-------------- 258
L +M E R + TL +V++ACI LG G+ +H G+
Sbjct: 306 LFNEMRNET--REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Query: 259 -----------LLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMIS 307
L + + ++ S+I +Y G I+ VF+ + KS S+ M +
Sbjct: 364 SKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTN 423
Query: 308 GLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIK 367
G S +G E L+ F ++ + L D+V V+SAC+ + G Q F
Sbjct: 424 GFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDS 483
Query: 368 PTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
V ++DL + G + + +M +K ++V W S++S
Sbjct: 484 DQVVS-SSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISG 525
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 231/472 (48%), Gaps = 36/472 (7%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCAL---AKWGSMEYACSIFRQ 90
+L+ C ME K +HA LK G CG V T + ++ G +E A F
Sbjct: 110 VLRACGKMENMVDGKPIHAQALKNGL-----CGCVYVQTGLVGLYSRLGYIELAKKAFDD 164
Query: 91 IEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLK------ACSLL 144
I E + +N+++ G + N I K ACSL
Sbjct: 165 IAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLF 224
Query: 145 GGV------KEGIQIHGHV------FKAGVGDDIFVQNG-----LISMYGKCGAIKHACD 187
+ I I G+V D + +NG +IS Y K G ++ A +
Sbjct: 225 SAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEE 284
Query: 188 VFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM-SREGHWRAEESTLVSVLSACIHL 246
+F M +K + A+I + L L M R + + +E TL SV+SA L
Sbjct: 285 LFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQL 344
Query: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMI 306
G+ + G + + + +++ ++ TSLID+Y+K G K +F N+ +K SY+ MI
Sbjct: 345 GNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMI 404
Query: 307 SGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKI 366
G I+G EA +F+ ++E+ + P+ V + G+LSA SH+GLV EG +CF +M+ +H +
Sbjct: 405 MGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNL 463
Query: 367 KPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAE 426
+P+ HYG MVD+LGRAG L EAY LIKSMP++PN VW +LL A +H N+E GEIA
Sbjct: 464 EPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACS 523
Query: 427 KLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEA 478
L + G LA +Y+ +W+D +R + +K L +T G S VE
Sbjct: 524 HCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVEG 575
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 171/406 (42%), Gaps = 31/406 (7%)
Query: 37 LLKRCKSMEEFKQVHAHVL--KLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEP 94
L+RC +E+ KQVHA ++ + L T ++ + Y I +
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSR-NIVTYVKRILKGFNGH 67
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIH 154
SF + ++R GI P + +L+AC + + +G IH
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
K G+ ++VQ GL+ +Y + G I+ A F+ + EK+ SW++++ + +
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 215 QCLMLLGDMSREG--HW---------RAEESTLVSVLSACIHLGSPNLGRCIHG------ 257
+ + + + W + + S+ SA + L SP + G
Sbjct: 188 EARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSA-MPLKSPASWNILIGGYVNCR 246
Query: 258 ------ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSI 311
+ + N V ++I Y K G ++ +F+ M++K + Y MI+ +
Sbjct: 247 EMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQ 306
Query: 312 HGHGAEALQVFSEILEEG--LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPT 369
+G +AL++F+++LE + PD++ V+SA S G + G ++ EH IK
Sbjct: 307 NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGIKID 365
Query: 370 VQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
++DL + G +A+ + ++ K + V + +++ C ++
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGIN 410
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 214/436 (49%), Gaps = 61/436 (13%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCG---------------- 180
+ KAC +EG QIHG V + + D+F+ N L+SMY K G
Sbjct: 281 MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
Query: 181 ---------------AIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSR 225
I A ++FEKM K + SW+ +I + +C+ L G M
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPE 400
Query: 226 EGH--WRA-----------EES-----------------TLVSVLSACIHLGSPNLGRCI 255
+ + W A EE+ T SVLSA L G I
Sbjct: 401 KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI 460
Query: 256 HGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHG 315
HG +++ ++ V+ SL+ MY K G +F ++E + SY MISG S +G G
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520
Query: 316 AEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGC 375
+AL++FS + G P+ V ++ +LSAC H G V+ G + FK+M+ + I+P HY C
Sbjct: 521 KKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYAC 580
Query: 376 MVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNN 435
MVDLLGR+G+L +A LI +MP KP+ VW SLLSA K HL +++ E+AA+KL L P++
Sbjct: 581 MVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDS 640
Query: 436 PGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEF 495
Y+VL+ +Y+ K D RI K + + PG S + + +V+ F++ D SQ
Sbjct: 641 ATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNL 700
Query: 496 DTIYNMIHQMEWQLEF 511
+ I + + ++E
Sbjct: 701 EEIGFTLKMIRKEMEL 716
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 145/340 (42%), Gaps = 17/340 (5%)
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
VF+ ++ + ++ Y K G I A +F++M E++V +W+A+I + A +
Sbjct: 198 RVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFED 257
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
L M +EG + +TL + AC G IHG++ R E ++ + SL+
Sbjct: 258 GFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLM 317
Query: 276 DMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDV 335
MY K G + + VF M K S+ +I+GL +EA ++F E+ D V
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF----EKMPGKDMV 373
Query: 336 VYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKS 395
+ ++ S G +++ ++ F M + I T M+ G EA
Sbjct: 374 SWTDMIKGFSGKGEISKCVELFGMMPEKDNITWT-----AMISAFVSNGYYEEALCWFHK 428
Query: 396 MPIK---PNDVVWRSLLSACKVHLNLEIG-EIAAEKLFMLNPNNPGDYLVLANMYARAHK 451
M K PN + S+LSA +L G +I + M N+ L +MY +
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGN 488
Query: 452 WNDVARIRREMADKHLVQ----TPGFSMVEAERKVYKFVS 487
ND +I +++ ++V G+S +K K S
Sbjct: 489 TNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFS 528
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
P+++ + +L A + L + EG+QIHG V K + +D+ VQN L+SMY KCG A +
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
F + E ++ S++ +I ++ + L L + G T +++LSAC+H+G
Sbjct: 496 FSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGK-EPNGVTFLALLSACVHVGY 554
Query: 249 PNLG 252
+LG
Sbjct: 555 VDLG 558
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 211/401 (52%), Gaps = 4/401 (0%)
Query: 87 IFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG- 145
+F Q+E + MI G V+ N + P+ +L AC L
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNY 266
Query: 146 GVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIG 205
G +IHG F+ G D + ++MY +CG + + +FE + V WS++I
Sbjct: 267 GSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMIS 326
Query: 206 AHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISE 265
+A + + LL M +EG A TL++++SAC + + +H +L+
Sbjct: 327 GYAETGDCSEVMNLLNQMRKEG-IEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFM 385
Query: 266 LNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEI 325
++++ +LIDMY K G + VF + EK S++ MI+ +HGHG+EAL++F +
Sbjct: 386 SHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM 445
Query: 326 LEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGM 385
++ G DD+ ++ +LSAC+HAGLV E F H + T++HY C ++LLGR G
Sbjct: 446 IKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYH-MPVTLEHYACYINLLGRFGK 504
Query: 386 LREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEI-GEIAAEKLFMLNPNNPGDYLVLAN 444
+ +A+ + +MP+KP+ +W SLLSAC+ H L++ G+I A +L P+NP +Y++L+
Sbjct: 505 IDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSK 564
Query: 445 MYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKF 485
++ + ++ +RR M + L + GFS +E E ++ +
Sbjct: 565 IHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 17/294 (5%)
Query: 127 IGPDNF--IYPFLLKACS------LLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGK 178
+G + F I P ++KAC+ LLG Q+H KAG D V N LISMY K
Sbjct: 40 LGTNGFTAILPSVIKACAFQQEPFLLGA-----QLHCLCLKAGADCDTVVSNSLISMYAK 94
Query: 179 CGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVS 238
VF++M + S+ +II + + ++ + L+ +M G E + S
Sbjct: 95 FSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSE-LVAS 153
Query: 239 VLSACIHLGSPN-LGRCIHGILLRNIS-ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE 296
+L+ C +GS + + R H ++L + + +V++ T+L+DMY+K VF M
Sbjct: 154 LLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEV 213
Query: 297 KSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
K+ S+T MISG + + + +F + E L P+ V + VL AC + ++
Sbjct: 214 KNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKE 273
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLS 410
F H + + + R G + + L ++ ++ + V+W S++S
Sbjct: 274 IHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR-DVVMWSSMIS 326
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 162/374 (43%), Gaps = 16/374 (4%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
Q+H LK G CD+ ++L++ AK+ +F ++ + Y ++I
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISM--YAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG-GVKEGIQIHGHVF-KAGVGDDI 166
G P + + LL C+ +G K H V + + +
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 167 FVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSRE 226
+ L+ MY K A VF++M+ K+ SW+A+I + + + L M RE
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 227 GHWRAEESTLVSVLSACIHLG-SPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
+ R TL+SVL AC+ L +L + IHG R+ + + + + MY + G +
Sbjct: 246 -NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVS 304
Query: 286 KGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS 345
+F+ + ++ MISG + G +E + + +++ +EG+ + V + ++SAC+
Sbjct: 305 LSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACT 364
Query: 346 HAGLVNEGLQCFKNMQFEHKIKPTVQHY----GCMVDLLGRAGMLREAYGLIKSMPIKPN 401
++ L++ F + +K + ++D+ + G L A + + K +
Sbjct: 365 NSTLLS-----FASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK-D 418
Query: 402 DVVWRSLLSACKVH 415
V W S+++A +H
Sbjct: 419 LVSWSSMINAYGLH 432
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 227/467 (48%), Gaps = 13/467 (2%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
Q+H+ + + GF D + + +V AK+G M A + F ++ + +I G +
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDM--YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIR 156
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGH-VFKAGVGDDIF 167
D IY ++ G VK G +F +
Sbjct: 157 CGELDLASKLFDQMPHV---KDVVIYNAMMD-----GFVKSGDMTSARRLFDEMTHKTVI 208
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
+I Y I A +F+ M E+++ SW+ +IG + + + + L +M
Sbjct: 209 TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATT 268
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
++ T++SVL A G+ +LG H + R + V V T+++DMY K G IEK
Sbjct: 269 SLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKA 328
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
+F M EK S+ MI G +++G+ AL +F ++ E PD++ + V++AC+H
Sbjct: 329 KRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHG 387
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
GLV EG + F M+ E + ++HYGCMVDLLGRAG L+EA LI +MP +PN ++ S
Sbjct: 388 GLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSS 446
Query: 408 LLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHL 467
LSAC + ++E E +K L P N G+Y++L N+YA +W+D ++ M
Sbjct: 447 FLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQA 506
Query: 468 VQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGY 514
+ G S++E V +F+S D + P +I+ ++ + + E Y
Sbjct: 507 KKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 152/342 (44%), Gaps = 27/342 (7%)
Query: 128 GPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACD 187
PDNF + L K+CSL V +G+Q+H +++ G D++V G++ MY K G + A +
Sbjct: 75 APDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARN 134
Query: 188 VFEKMDEKSVASWSAIIGAHA-CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHL 246
F++M +S SW+A+I + C E L L + + + +++ +
Sbjct: 135 AFDEMPHRSEVSWTALISGYIRCGE-----LDLASKLFDQMPHVKDVVIYNAMMDGFVKS 189
Query: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMI 306
G R L ++ V+ T++I Y I+ +F M E++ S+ MI
Sbjct: 190 GDMTSAR----RLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 307 SGLSIHGHGAEALQVFSEI-LEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
G + E +++F E+ L PDDV + VL A S G ++ G C +Q K
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQ-RKK 304
Query: 366 IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAA 425
+ V+ ++D+ + G + +A + MP K W +++ ++ N AA
Sbjct: 305 LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK-QVASWNAMIHGYALNGNAR----AA 359
Query: 426 EKLF--MLNPNNPGDYLVLANMYARAH--------KWNDVAR 457
LF M+ P + +LA + A H KW V R
Sbjct: 360 LDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMR 401
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 230/461 (49%), Gaps = 19/461 (4%)
Query: 28 RFNEQGWYPLLKRCKSM---EEFKQVHAHVLKLGFFCDSFCGSNLVATCAL----AKWGS 80
+ N+ + +LK CK + +E Q+H V K C NL+ AL A+ G
Sbjct: 110 KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEK------GNCAGNLIVRSALLSLYARCGK 163
Query: 81 MEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKA 140
ME A F ++E +N MI G + G PD F + LL+A
Sbjct: 164 MEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Query: 141 CSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASW 200
++ ++ ++HG K G G + L++ Y KCG++ +A + E ++ + S
Sbjct: 224 SIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSC 283
Query: 201 SAII-GAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL 259
+A+I G + DM R + +E + S+L C + S +GR IHG
Sbjct: 284 TALITGFSQQNNCTSDAFDIFKDMIRM-KTKMDEVVVSSMLKICTTIASVTIGRQIHGFA 342
Query: 260 LRNIS-ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEA 318
L++ +V + SLIDMY KSG IE V F+ M EK S+T +I+G HG+ +A
Sbjct: 343 LKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKA 402
Query: 319 LQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVD 378
+ +++ + E + P+DV ++ +LSACSH G G + + M +H I+ +H C++D
Sbjct: 403 IDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIID 462
Query: 379 LLGRAGMLREAYGLIKSMP--IKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNP 436
+L R+G L EAY LI+S + + W + L AC+ H N+++ ++AA +L + P P
Sbjct: 463 MLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKP 522
Query: 437 GDYLVLANMYARAHKWNDVARIRREMADK-HLVQTPGFSMV 476
+Y+ LA++YA W++ R+ M + + PG+S+V
Sbjct: 523 VNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 1/211 (0%)
Query: 133 IYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKM 192
+Y LK CS K+ + IHG+ G ++ +++ LI +Y K G +KHA +F+++
Sbjct: 14 LYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRI 73
Query: 193 DEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
++ V SW+A+I + L+L +M RE +A + T SVL +C LG G
Sbjct: 74 SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRE-DVKANQFTYGSVLKSCKDLGCLKEG 132
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
IHG + + N++V+++L+ +Y + G +E+ F +M E+ S+ MI G + +
Sbjct: 133 MQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTAN 192
Query: 313 GHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+ +F +L EG PD + +L A
Sbjct: 193 ACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 255 IHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGH 314
IHG + N N+ +K LID+Y+K G ++ +F ++++ S+T MIS S G+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 315 GAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
+AL +F E+ E + + Y VL +C G + EG+Q +++ + +
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVE-KGNCAGNLIVRS 152
Query: 375 CMVDLLGRAGMLREAYGLIKSMPIKPNDVV-WRSLL 409
++ L R G + EA SM K D+V W +++
Sbjct: 153 ALLSLYARCGKMEEARLQFDSM--KERDLVSWNAMI 186
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 220/453 (48%), Gaps = 9/453 (1%)
Query: 30 NEQGWYPLLKRCKSMEEFKQ---VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACS 86
NE + L+ C + Q H ++K G S ++L+ K G + A
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM--YVKCGDISNARR 298
Query: 87 IFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGG 146
+F + + MI G + I P+ +L C L+
Sbjct: 299 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIEN 358
Query: 147 VKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGA 206
++ G +HG K G+ D V N L+ MY KC + A VFE EK + +W++II
Sbjct: 359 LELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISG 417
Query: 207 HACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG--ILLRNIS 264
+ H+ L L M+ E T+ S+ SAC LGS +G +H + L ++
Sbjct: 418 FSQNGSIHEALFLFHRMNSES-VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLA 476
Query: 265 ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSE 324
+V V T+L+D Y K G + +F + EK+ +++ MI G G +L++F E
Sbjct: 477 SSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEE 536
Query: 325 ILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAG 384
+L++ P++ + +LSAC H G+VNEG + F +M ++ P+ +HY CMVD+L RAG
Sbjct: 537 MLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAG 596
Query: 385 MLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLAN 444
L +A +I+ MPI+P+ + + L C +H ++GEI +K+ L+P++ Y++++N
Sbjct: 597 ELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSN 656
Query: 445 MYARAHKWNDVARIRREMADKHLVQTPGFSMVE 477
+YA +WN +R M + L + G S +E
Sbjct: 657 LYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 197/469 (42%), Gaps = 55/469 (11%)
Query: 1 MTRTTVLSQTHLLSLPSTPPQCSELSTR----FNEQG------------WYPLLKRCKSM 44
M R+ LS T P P+C +T E+ + LL +C ++
Sbjct: 1 MLRSITLSPTRRFGFP---PRCVSFTTIKELILTEENDGSSLHYAASSPCFLLLSKCTNI 57
Query: 45 EEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIR 104
+ +Q H + G D + LV+ +G + A +F QI EP + + M+R
Sbjct: 58 DSLRQSHGVLTGNGLMGDISIATKLVSLYGF--FGYTKDARLVFDQIPEPDFYLWKVMLR 115
Query: 105 GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGD 164
G D+ ++ LKAC+ L + G +IH + K D
Sbjct: 116 CYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFD 175
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
++ V GL+ MY KCG IK A VF + ++V W+++I + ++ + L+L M
Sbjct: 176 NV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM- 233
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
RE + E T +++ AC L + + G+ HG L+++ EL+ + TSL+DMYVK G I
Sbjct: 234 RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 293
Query: 285 EKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC 344
VF + +T MI G + +G EAL +F ++ + P+ V VLS C
Sbjct: 294 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Query: 345 S-------------------------HAGLVNEGLQCFKNMQ----FEHKIKPTVQHYGC 375
LV+ +C++N FE + + + +
Sbjct: 354 GLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 413
Query: 376 MVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSACKVHLNLEIG 421
++ + G + EA L M + PN V SL SAC +L +G
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 229/478 (47%), Gaps = 43/478 (8%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
+L C +E Q+H +K GF + + G++LV+ ++ G A +F ++
Sbjct: 138 VLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSM--YSRCGEWVLAARMFEKVPHKSV 195
Query: 97 FEYNTMIRGNV--SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIH 154
YN I G + +MN P++ + + AC+ L ++ G Q+H
Sbjct: 196 VTYNAFISGLMENGVMNLVPSVFNLMRKFSSE-EPNDVTFVNAITACASLLNLQYGRQLH 254
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKM-DEKSVASWSAIIGAHACAEMW 213
G V K + V LI MY KC K A VF ++ D +++ SW+++I
Sbjct: 255 GLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQH 314
Query: 214 HQCLMLLGDMSREG------HWRAEEST----------------------------LVSV 239
+ L + EG W + S L S+
Sbjct: 315 ETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSL 374
Query: 240 LSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR 299
LSAC + + G+ IHG +++ +E ++ V TSLIDMY+K G +F K +
Sbjct: 375 LSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPK 434
Query: 300 --FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCF 357
+ VMISG HG A+++F + EE + P + VLSACSH G V +G Q F
Sbjct: 435 DPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIF 494
Query: 358 KNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLN 417
+ MQ E+ KP+ +H GCM+DLLGR+G LREA +I M + V SLL +C+ HL+
Sbjct: 495 RLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLD 553
Query: 418 LEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSM 475
+GE AA KL L P NP +++L+++YA +W DV IR+ + K LV+ PG S+
Sbjct: 554 PVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 161/340 (47%), Gaps = 9/340 (2%)
Query: 25 LSTRFNEQGWYPLLKRCKSMEEFKQ---VHAHVLKLGFFCDSFCGSNLVATCALAKWGSM 81
LS N+ + PLLK C + + Q +HA V+K GFF D F + LV+ K +
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVK--QV 82
Query: 82 EYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKAC 141
A + ++ E G N + G + G G ++ +L C
Sbjct: 83 TDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
Query: 142 SLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWS 201
G ++ G+Q+H K+G +++V L+SMY +CG A +FEK+ KSV +++
Sbjct: 143 ---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYN 199
Query: 202 AIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLR 261
A I + + + M + + T V+ ++AC L + GR +HG++++
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 262 NISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE-KSRFSYTVMISGLSIHGHGAEALQ 320
+ +V T+LIDMY K C + VF + + ++ S+ +ISG+ I+G A++
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 321 VFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM 360
+F ++ EGL PD + ++S S G V E + F+ M
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 137/308 (44%), Gaps = 20/308 (6%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
P+ F +P LLK+C+ LG V +G +H V K G D+F L+SMY K + A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
++M E+ +AS +A + + GD G T+ SVL C G
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGS-GMNSVTVASVLGGC---GD 144
Query: 249 PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISG 308
G +H + +++ E+ V V TSL+ MY + G +F+ + KS +Y ISG
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 309 LSIHGHGAEALQVFSEILE-EGLAPDDVVYVGVLSACSHAGLVN-------EGLQCFKNM 360
L +G VF+ + + P+DV +V ++AC A L+N GL K
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC--ASLLNLQYGRQLHGLVMKKEF 262
Query: 361 QFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEI 420
QFE + ++D+ + + AY + + N + W S++S ++ E
Sbjct: 263 QFETMVGTA------LIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHET 316
Query: 421 GEIAAEKL 428
EKL
Sbjct: 317 AVELFEKL 324
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 229/447 (51%), Gaps = 16/447 (3%)
Query: 35 YPL-LKRCKSMEEFK---QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQ 90
+PL +K C + + + VH VL++GF D G++ V K + A +F +
Sbjct: 113 FPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDF--YGKCKDLFSARKVFGE 170
Query: 91 IEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEG 150
+ E + + ++ V +G N + L+K+ L+ K
Sbjct: 171 MPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKK-- 228
Query: 151 IQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACA 210
+F DI +I Y K G + A D+FE+ V +WSA+I +A
Sbjct: 229 ------LFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQN 282
Query: 211 EMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNV-V 269
++ + +M + + + +E +V ++SAC +G L + L + +++ +
Sbjct: 283 GQPNEAFKVFSEMCAK-NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHY 341
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
V +LIDM K G +++ +F+ M ++ SY M+ G++IHG G+EA+++F ++++EG
Sbjct: 342 VVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG 401
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
+ PD+V + +L C + LV EGL+ F+ M+ ++ I + HY C+V+LL R G L+EA
Sbjct: 402 IVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEA 461
Query: 390 YGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARA 449
Y LIKSMP + + W SLL C +H N EI E+ A LF L P + G Y++L+N+YA
Sbjct: 462 YELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAAL 521
Query: 450 HKWNDVARIRREMADKHLVQTPGFSMV 476
+W DVA +R +M + + + G S +
Sbjct: 522 DRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 180/403 (44%), Gaps = 38/403 (9%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
L K CKS Q+HA +++ G D S +++ + + S+ Y+ S+F ++ PG+
Sbjct: 16 LFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSS-SSLSYSSSVFERVPSPGT 74
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIG-PDNFIYPFLLKACSLLGGVKEGIQIHG 155
+ +N +I+G + G+ PD + +P ++K CS G V+ G +HG
Sbjct: 75 YLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHG 134
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
V + G D+ V + YGKC + A VF +M E++ SW+A++ A+ + +
Sbjct: 135 LVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEE 194
Query: 216 CLMLLGDMSRE--GHWRAEESTLVSVLSACIHLGSPNLGRCIHG-ILLRNISELNVVVKT 272
+ M G W A LV G ++ L + + +++ T
Sbjct: 195 AKSMFDLMPERNLGSWNALVDGLVKS------------GDLVNAKKLFDEMPKRDIISYT 242
Query: 273 SLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAP 332
S+ID Y K G + +F+ +++ +I G + +G EA +VFSE+ + + P
Sbjct: 243 SMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKP 302
Query: 333 DDVVYVGVLSACSHAGLVNEGLQCFK-----NMQFEHKIKPTVQHY--GCMVDLLGRAGM 385
D+ + VG++SACS G CF+ + ++ HY ++D+ + G
Sbjct: 303 DEFIMVGLMSACSQMG-------CFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGH 355
Query: 386 LREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKL 428
+ A L + MP R L+S C + + I +E +
Sbjct: 356 MDRAAKLFEEMP-------QRDLVSYCSMMEGMAIHGCGSEAI 391
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 129/317 (40%), Gaps = 45/317 (14%)
Query: 188 VFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLG 247
VFE++ W+ +I ++ ++ + + +L M R G R +E T V+ C + G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 248 SPNLGRCIHGILLRNISELNVVVKTSLIDM------------------------------ 277
+G +HG++LR + +VVV TS +D
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 278 -YVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVV 336
YVKSG +E+ +F M E++ S+ ++ GL G A ++F E+ + D +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR----DIIS 240
Query: 337 YVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM 396
Y ++ + G + FE V+ + ++ + G EA+ + M
Sbjct: 241 YTSMIDGYAKGGDMVSARDL-----FEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 397 ---PIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLV--LANMYARAHK 451
+KP++ + L+SAC E+ E L Y+V L +M A+
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGH 355
Query: 452 WNDVARIRREMADKHLV 468
+ A++ EM + LV
Sbjct: 356 MDRAAKLFEEMPQRDLV 372
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 199/377 (52%), Gaps = 32/377 (8%)
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
D ++ LK+C+ G +H H K+ + FV L+ MYGKC ++ HA +F
Sbjct: 47 DAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLF 106
Query: 190 EKMDEKSVASWSAIIGAHA-------CAEMWHQCLMLLGDMS-----------REGHWRA 231
+++ +++ W+A+I + E++ ++ + S +G +RA
Sbjct: 107 DEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRA 166
Query: 232 EE--------------STLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDM 277
E TL++++SAC +G+ L + IH RN+ E + +K+ L++
Sbjct: 167 IEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEA 226
Query: 278 YVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
Y + G I VF +M ++ +++ +IS ++HG AL+ F E+ + PDD+ +
Sbjct: 227 YGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
Query: 338 VGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP 397
+ VL ACSHAGL +E L FK MQ ++ ++ + HY C+VD+L R G EAY +I++MP
Sbjct: 287 LNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Query: 398 IKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVAR 457
KP W +LL AC+ + +E+ EIAA +L M+ P NP +Y++L +Y + + R
Sbjct: 347 EKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAER 406
Query: 458 IRREMADKHLVQTPGFS 474
+R +M + + +PG S
Sbjct: 407 LRLKMKESGVKVSPGSS 423
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 221/432 (51%), Gaps = 7/432 (1%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE---EPGSFEYNTMIR 104
KQ+H V+K G F S L+ + GS+ YA +F Q + +N+M+
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDM--YSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 105 GNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGD 164
G + + D++ LK C ++ G+Q+H V +G
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
D V + L+ ++ G I+ A +F ++ K + ++S +I + L ++
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
+ G A++ + ++L C L S G+ IHG+ ++ E V T+L+DMYVK G I
Sbjct: 436 KLG-LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEI 494
Query: 285 EKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC 344
+ GV +F M E+ S+T +I G +G EA + F +++ G+ P+ V ++G+LSAC
Sbjct: 495 DNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC 554
Query: 345 SHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV 404
H+GL+ E + M+ E+ ++P ++HY C+VDLLG+AG+ +EA LI MP++P+ +
Sbjct: 555 RHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTI 614
Query: 405 WRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMAD 464
W SLL+AC H N + + AEKL P++P Y L+N YA W+ ++++ RE A
Sbjct: 615 WTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKV-REAAK 673
Query: 465 KHLVQTPGFSMV 476
K + G S +
Sbjct: 674 KLGAKESGMSWI 685
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 128/307 (41%), Gaps = 35/307 (11%)
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV 197
L+ C + K G I HV K G+ ++F+ N +ISMY + A VF++M E+++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
+W+ ++ + ++ + L M A E +VL AC +G LG ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 258 ILLRNISELNVVVKTSLIDMYV-------------------------------KSGCIEK 286
+ + +VV+ S++DMYV K+G +++
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 287 GVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSH 346
V +F M + + S+ +ISG G AL+ + EGL D L ACS
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 347 AGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI--KSMPIKPNDVV 404
GL+ G Q + ++ + ++D+ G L A + + + + + V
Sbjct: 251 GGLLTMGKQ-LHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 405 WRSLLSA 411
W S+LS
Sbjct: 310 WNSMLSG 316
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 172/412 (41%), Gaps = 42/412 (10%)
Query: 38 LKRCKSMEEFKQ---VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEP 94
L+ C ++ FK+ + AHV+K G + F +N+++ + + A +F ++ E
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISM--YVDFRLLSDAHKVFDEMSER 69
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDN-FIYPFLLKACSLLGGVKEGIQI 153
+ TM+ G S N F+Y +LKAC L+G ++ GI +
Sbjct: 70 NIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILV 129
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
+ + K + D+ + N ++ MY K G + A F+++ S SW+ +I + A +
Sbjct: 130 YERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLM 189
Query: 214 HQCLMLLGDMSR---------------EGHWRAEE--------------STLVSVLSACI 244
+ + L M + +G RA E L L AC
Sbjct: 190 DEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 245 HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVF--QNMAEKSRFS- 301
G +G+ +H ++++ E + ++LIDMY G + VF + +A S +
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
+ M+SG I+ AL + +I + L D G L C + + GLQ +
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 362 FE-HKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSAC 412
+++ V +VDL G +++A+ L +P K + + + L+ C
Sbjct: 370 VSGYELDYIVGS--ILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGC 418
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 186/341 (54%), Gaps = 5/341 (1%)
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV 197
+ A LG V +G HG K+ D +QN LI+MYG+C I+ A VF + + ++
Sbjct: 588 ISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNL 647
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
SW+ +I A + + + L ++ E E T V +LSA LGS + G H
Sbjct: 648 CSWNCVISALSQNKAGREVFQLFRNLKLE----PNEITFVGLLSASTQLGSTSYGMQAHC 703
Query: 258 ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAE 317
L+R + N V +L+DMY G +E G+ VF+N S ++ +IS HG G +
Sbjct: 704 HLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEK 763
Query: 318 ALQVFSEILEEG-LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCM 376
A+++F E+ + P+ ++ +LSACSH+G ++EGL +K M+ + +KP +H +
Sbjct: 764 AMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWI 823
Query: 377 VDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNP 436
VD+LGRAG LREAY I + VW +LLSAC H + ++G+ AE LF + P+N
Sbjct: 824 VDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNA 883
Query: 437 GDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVE 477
Y+ LAN Y W + R+R+ + D L + PG+S+++
Sbjct: 884 SYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVID 924
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 11/260 (4%)
Query: 178 KCGAIKHACDVFEKMDE-KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTL 236
K G + A E M E + + SW+++I A + + L MSREG R + TL
Sbjct: 525 KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITL 584
Query: 237 VSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE 296
+ +SA +LG GRC HG+ ++++ EL+ ++ +LI MY + IE V VF +++
Sbjct: 585 LGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISD 644
Query: 297 KSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
+ S+ +IS LS + G E Q+F + L P+++ +VG+LSA + G + G+Q
Sbjct: 645 PNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQA 701
Query: 357 FKNM-QFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
++ + + P V +VD+ GML + ++ + W S++SA H
Sbjct: 702 HCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVNSIS-AWNSVISAHGFH 758
Query: 416 LNLEIGEIAAEKLFMLNPNN 435
+GE A E L+ N+
Sbjct: 759 ---GMGEKAMELFKELSSNS 775
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 76 AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYP 135
AK ++ A +F +E +NT++ ++ + G D +
Sbjct: 234 AKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFS 293
Query: 136 FLLKACSLLGGVKEGIQIHGHVFKAGVGDD--IFVQNGLISMYGKCGAIKHACDVFEKMD 193
++ ACS + + G +HG V K+G + + V N +ISMY KCG + A VFE++
Sbjct: 294 CVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELV 353
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
+ V S +AI+ A M+ + +L M + + +T+VS+ S C L GR
Sbjct: 354 CRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGR 413
Query: 254 CIHGILLR-NISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
+HG +R + + V S+IDMY K G + +F+ + S+ MIS S +
Sbjct: 414 AVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQN 473
Query: 313 GHGAEALQVFSEILEE 328
G +A +F E++ E
Sbjct: 474 GFTHKAKNLFKEVVSE 489
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 160/400 (40%), Gaps = 8/400 (2%)
Query: 15 LPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCA 74
LP + E S F + R ++ E + VH LK G D S L+
Sbjct: 75 LPERENRTMESSFMFLRDVLRSFMMRTET-ETPRSVHCFALKCGLLQDLATSSKLLT--F 131
Query: 75 LAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIY 134
+ G + + +F +++E +N+MI G D+
Sbjct: 132 YGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTL 191
Query: 135 PFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDE 194
A S L ++ +H + G+ D + N L+++Y K + A VF M+
Sbjct: 192 LLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEH 251
Query: 195 KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRC 254
+ + SW+ I+ + L M+ G A+ T V+SAC + LG
Sbjct: 252 RDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ-EADTVTFSCVISACSSIEELTLGES 310
Query: 255 IHGILLRN--ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
+HG+++++ E +V V S+I MY K G E VF+ + + S +++G + +
Sbjct: 311 LHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAAN 370
Query: 313 GHGAEALQVFSEILE-EGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQ 371
G EA + +++ + + PD V + S C EG ++
Sbjct: 371 GMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALE 430
Query: 372 HYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
++D+ G+ G+ +A L K+ + + V W S++SA
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKTTTHR-DLVSWNSMISA 469
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 15/263 (5%)
Query: 81 MEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKA 140
+E A +F I +P +N +I ++ + P+ + LL A
Sbjct: 632 IESAVKVFGLISDPNLCSWNCVIS---ALSQNKAGREVFQLFRNLKLEPNEITFVGLLSA 688
Query: 141 CSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASW 200
+ LG G+Q H H+ + G + FV L+ MY CG ++ VF S+++W
Sbjct: 689 STQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAW 748
Query: 201 SAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL- 259
+++I AH M + + L ++S +S+ +S+LSAC H G + G + +
Sbjct: 749 NSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQME 808
Query: 260 ----LRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS-YTVMISGLSIHGH 314
++ ++E V + +DM ++G + + + E + + ++S + HG
Sbjct: 809 EKFGVKPVTEHRVWI----VDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGD 864
Query: 315 GAEALQVFSEILEEGLAPDDVVY 337
+V +E+L E + PD+ Y
Sbjct: 865 TKLGKEV-AEVLFE-MEPDNASY 885
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 210/413 (50%), Gaps = 35/413 (8%)
Query: 99 YNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVF 158
YNT+IR ++ + P+N +P L+KA V G+ +HG
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 159 KAGVGDDIFVQNGLISMYGKCGAIK-------------------------------HACD 187
K G D FVQ + YG+ G ++ +A +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 188 VFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM--SREGHWRAEESTLVSVLSACIH 245
F++M V SW+ +I + + + LM+ G+M + E+T VSVLS+C +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 246 L--GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYT 303
G LG+ IHG ++ L + T+L+DMY K+G +E + +F + +K ++
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 304 VMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE 363
+IS L+ +G +AL++F + + P+ + + +L+AC+ + LV+ G+Q F ++ E
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 364 HKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEI 423
+KI PT +HYGC+VDL+GRAG+L +A I+S+P +P+ V +LL ACK+H N E+G
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 424 AAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMV 476
++L L P + G Y+ L+ A W++ ++R+ M + + + P +S++
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 145/477 (30%), Positives = 233/477 (48%), Gaps = 39/477 (8%)
Query: 33 GWYPLLKRC-----KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSI 87
GW PL+ R + K +H+ +K G D GS+L++ K G + A +
Sbjct: 46 GWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISM--YGKCGCVVSARKV 103
Query: 88 FRQIEEPGSFEYNTMIRGNVSIMNXXXXX-----------XXXXXXXXXGIGPDNFI--- 133
F ++ E +N MI G +S + G G I
Sbjct: 104 FDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKA 163
Query: 134 ------YPFLLK---ACSLLGGV---KEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGA 181
PF LK A S++ GV ++ F+ + FV + ++S Y + G
Sbjct: 164 RELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGD 223
Query: 182 IKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+ A +F ++ + + W+ +I +A + +M EG + + T+ S+LS
Sbjct: 224 VHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEG-YEPDAVTVSSILS 282
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS 301
AC G ++GR +H ++ ELN V +LIDMY K G +E VF++++ +S
Sbjct: 283 ACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVAC 342
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
MIS L+IHG G EAL++FS + L PD++ ++ VL+AC H G + EGL+ F M+
Sbjct: 343 CNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMK 402
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIG 421
+ +KP V+H+GC++ LLGR+G L+EAY L+K M +KPND V +LL ACKVH++ E+
Sbjct: 403 TQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMA 461
Query: 422 E----IAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFS 474
E I + N + ++N+YA +W +R EM + L ++PG S
Sbjct: 462 EQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
Q L+L G + R G + L+ AC+ + LG+ +H ++ +V+V +SL
Sbjct: 29 QALVLYGGIRRRGVYFPGWVPLILRACACV-VPRVVLGKLLHSESIKFGVCSDVMVGSSL 87
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
I MY K GC+ VF M E++ ++ MI G +G A +F EI + +
Sbjct: 88 ISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNT 144
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
V ++ ++ + + + F+ M FE K V+ + M+ + + +A +
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERMPFELK---NVKAWSVMLGVYVNNRKMEDARKFFE 201
Query: 395 SMPIKPNDVVWRSLLSA 411
+P K N VW ++S
Sbjct: 202 DIPEK-NAFVWSLMMSG 217
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 199/374 (53%), Gaps = 15/374 (4%)
Query: 234 STLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQN 293
S L+ + C + +HG + ++S L++ L++MY G + VF+
Sbjct: 255 SRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEK 314
Query: 294 MAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEG 353
M+EK+ ++ ++I + +G G +A+ +FS EEG PD ++ G+ AC G V+EG
Sbjct: 315 MSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG 374
Query: 354 LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACK 413
L F++M ++ I P+++ Y +V++ G L EA ++ MP++PN VW +L++ +
Sbjct: 375 LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSR 434
Query: 414 VHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMAD--KHLVQTP 471
VH NLE+G+ AE + L+P R +K + I + +D K ++
Sbjct: 435 VHGNLELGDYCAEVVEFLDP-------------TRLNKQSREGFIPVKASDVEKESLKKR 481
Query: 472 GFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKR 531
+ + + +F + D + PE D ++ ++ ++ + GY +T L D+D++ K
Sbjct: 482 SGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKE 541
Query: 532 ERLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRF 591
L HS+++A A +++++ P + +NLR+C DCH K +S I RE+ RD RF
Sbjct: 542 TLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRF 601
Query: 592 HHFKDGACSCKDYW 605
H K+GAC+CKDYW
Sbjct: 602 HQMKNGACTCKDYW 615
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 3/180 (1%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
L K C G++E +HG + + D+ + L+ MY CG A VFEKM EK+
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKN 319
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
+ +W II A + + EG+ + + AC LG + G
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI-PDGQLFRGIFYACGMLGDVDEGLLHF 378
Query: 257 GILLRNIS-ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLS-IHGH 314
+ R+ ++ SL++MY G +++ + + M + + LS +HG+
Sbjct: 379 ESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGN 438
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 187/346 (54%), Gaps = 7/346 (2%)
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
D F + LL AC +++G QIH +FK DI V L++MY K + A + F
Sbjct: 244 DYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECF 299
Query: 190 EKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSP 249
E M ++V SW+A+I A + + L G M E + + +E T SVLS+C +
Sbjct: 300 ESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE-NLQPDELTFASVLSSCAKFSAI 358
Query: 250 NLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGL 309
+ + ++ + S + V SLI Y ++G + + + F ++ E S+T +I L
Sbjct: 359 WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGAL 418
Query: 310 SIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPT 369
+ HG E+LQ+F +L++ L PD + ++ VLSACSH GLV EGL+CFK M +KI+
Sbjct: 419 ASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAE 477
Query: 370 VQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLF 429
+HY C++DLLGRAG + EA ++ SMP +P+ + C +H E + A+KL
Sbjct: 478 DEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLL 537
Query: 430 MLNPNNPGDYLVLANMYARAHKWNDVARIR-REMADKHLVQTPGFS 474
+ P P +Y +L+N Y WN A +R RE + + +TPG S
Sbjct: 538 EIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCS 583
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 182/412 (44%), Gaps = 54/412 (13%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+ + KQ H ++K G + F + L+ A K + A +F ++ +N +I
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQ--AYTKIREFDDADKLFDEMPLRNIVTWNILI 109
Query: 104 RGNVSIMNXXXXXX-----XXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVF 158
G + + D+ + L++ C+ +K GIQ+H +
Sbjct: 110 HGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV 169
Query: 159 KAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLM 218
K G+ F L+ YGKCG I A VFE + ++ + W+A++ ++ M +
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 219 LLGDM-SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDM 277
LL M S + +R + T S+LSAC G+ IH IL + + ++ V T+L++M
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 278 YVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
Y KS + F++M ++ S+ MI G + +G G EA+++F ++L E L PD++ +
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 338 VGVLSAC-----------------------------------SHAGLVNEGLQCFKNMQF 362
VLS+C S G ++E L CF +++
Sbjct: 346 ASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR- 404
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM--PIKPNDVVWRSLLSAC 412
+P + + ++ L G E+ + +SM ++P+ + + +LSAC
Sbjct: 405 ----EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSAC 452
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 196/349 (56%), Gaps = 5/349 (1%)
Query: 138 LKACSLLGGVKEGIQIHGHVFKA-GVGDDI-FVQNGLISMYGKCGAIKHACDVFEKMDEK 195
LKACS +G +K G H V ++ DI V+N LI+MY +C ++HA VF++++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 196 SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCI 255
S+++W++II A E + LL +M G + TL S+L +G+ G+
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEF 445
Query: 256 HGILLRNISELN-VVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGH 314
H +LR S + +++ SL+DMY KSG I VF +M ++ + +YT +I G G
Sbjct: 446 HCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGK 505
Query: 315 GAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
G AL F ++ G+ PD V V VLSACSH+ LV EG F M+ I+ ++HY
Sbjct: 506 GEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYS 565
Query: 375 CMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFM-LNP 433
CMVDL RAG L +A + ++P +P+ + +LL AC +H N IGE AA+KL + P
Sbjct: 566 CMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKP 625
Query: 434 NNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKV 482
+ G Y++LA+MYA W+ + ++ ++D + + F+++E + ++
Sbjct: 626 EHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 173/427 (40%), Gaps = 45/427 (10%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
LL C EF +Q+HAH + G DS LV + + ++ A +I E
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTF--YSAFNLLDEAQTITENSEI 146
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+N +I + GI D F YP ++KAC+ L G +
Sbjct: 147 LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVV 206
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
HG + + +++V N LISMY + G + A +F++M E+ SW+AII + E
Sbjct: 207 HGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 214 HQCLMLLGDMSREG------HW----------------------------RAEESTLVSV 239
+ LL M G W R +++
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 240 LSACIHLGSPNLGRCIHGILLRNISELNVV--VKTSLIDMYVKSGCIEKGVCVFQNMAEK 297
L AC H+G+ G+ H +++R+ S + + V+ SLI MY + + VFQ +
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 298 SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCF 357
S ++ +ISG + + E + E+L G P+ + +L + G + G +
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 358 KNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLN 417
+ K + + +VD+ ++G + A + SM K + V + SL+ +
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG---YGR 502
Query: 418 LEIGEIA 424
L GE+A
Sbjct: 503 LGKGEVA 509
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 196/349 (56%), Gaps = 5/349 (1%)
Query: 138 LKACSLLGGVKEGIQIHGHVFKA-GVGDDI-FVQNGLISMYGKCGAIKHACDVFEKMDEK 195
LKACS +G +K G H V ++ DI V+N LI+MY +C ++HA VF++++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 196 SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCI 255
S+++W++II A E + LL +M G + TL S+L +G+ G+
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEF 445
Query: 256 HGILLRNISELN-VVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGH 314
H +LR S + +++ SL+DMY KSG I VF +M ++ + +YT +I G G
Sbjct: 446 HCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGK 505
Query: 315 GAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
G AL F ++ G+ PD V V VLSACSH+ LV EG F M+ I+ ++HY
Sbjct: 506 GEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYS 565
Query: 375 CMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFM-LNP 433
CMVDL RAG L +A + ++P +P+ + +LL AC +H N IGE AA+KL + P
Sbjct: 566 CMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKP 625
Query: 434 NNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKV 482
+ G Y++LA+MYA W+ + ++ ++D + + F+++E + ++
Sbjct: 626 EHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 173/427 (40%), Gaps = 45/427 (10%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE 93
LL C EF +Q+HAH + G DS LV + + ++ A +I E
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTF--YSAFNLLDEAQTITENSEI 146
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
+N +I + GI D F YP ++KAC+ L G +
Sbjct: 147 LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVV 206
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMW 213
HG + + +++V N LISMY + G + A +F++M E+ SW+AII + E
Sbjct: 207 HGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 214 HQCLMLLGDMSREG------HW----------------------------RAEESTLVSV 239
+ LL M G W R +++
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 240 LSACIHLGSPNLGRCIHGILLRNISELNVV--VKTSLIDMYVKSGCIEKGVCVFQNMAEK 297
L AC H+G+ G+ H +++R+ S + + V+ SLI MY + + VFQ +
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 298 SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCF 357
S ++ +ISG + + E + E+L G P+ + +L + G + G +
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 358 KNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLN 417
+ K + + +VD+ ++G + A + SM K + V + SL+ +
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG---YGR 502
Query: 418 LEIGEIA 424
L GE+A
Sbjct: 503 LGKGEVA 509
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 215/451 (47%), Gaps = 25/451 (5%)
Query: 24 ELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSME- 82
E S R + + ++ C QVH +K G+ + + LV+ + + S E
Sbjct: 284 EASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGY--EKY---TLVSNATMTMYSSFED 338
Query: 83 --YACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKA 140
A +F +EE +NTMI G+ PD F + LL A
Sbjct: 339 FGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL-A 397
Query: 141 CSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASW 200
SL V E +Q + K G+ I + N LIS Y K G I+ A +FE+ K++ SW
Sbjct: 398 TSLDLDVLEMVQ--ACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISW 455
Query: 201 SAIIGAHACAEMWHQCLMLLGD------MSREGHWRAEESTLVSVLSACIHLGSPNLGRC 254
+AII +H G + E + TL ++LS C+ S LG
Sbjct: 456 NAIISG-----FYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQ 510
Query: 255 IHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGH 314
H +LR+ ++ +LI+MY + G I+ + VF M+EK S+ +IS S HG
Sbjct: 511 THAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGE 570
Query: 315 GAEALQVFSEILEEG-LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHY 373
G A+ + + +EG + PD + VLSACSHAGLV EGL+ F +M H + V H+
Sbjct: 571 GENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHF 630
Query: 374 GCMVDLLGRAGMLREAYGLIK--SMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFML 431
C+VDLLGRAG L EA L+K I VW +L SAC H +L++G++ A+ L
Sbjct: 631 SCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEK 690
Query: 432 NPNNPGDYLVLANMYARAHKWNDVARIRREM 462
++P Y+ L+N+YA A W + RR +
Sbjct: 691 EKDDPSVYVQLSNIYAGAGMWKEAEETRRAI 721
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 175/402 (43%), Gaps = 26/402 (6%)
Query: 24 ELSTRFNEQGWYPLLKRCK--SMEEFKQVHAHVLKLGFFCDSFCGSNLVA---TCALAKW 78
+L R ++ G+ +L C S++ KQVH+ V+K GFF S + L+ C +
Sbjct: 183 KLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQV--- 239
Query: 79 GSMEYACSIFRQIEEP--GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPF 136
+ AC +F + + +N +I G ++ + P + +
Sbjct: 240 --VVDACLVFEETDVAVRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVS 296
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
++ +CS G Q+HG K G V N ++MY A VFE ++EK
Sbjct: 297 VMGSCSC---AAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKD 353
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
+ +W+ +I ++ A++ + + M G + +E T S+L+ + L ++ +
Sbjct: 354 LVTWNTMISSYNQAKLGKSAMSVYKRMHIIG-VKPDEFTFGSLLATSLDL---DVLEMVQ 409
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
+++ + + +LI Y K+G IEK +F+ K+ S+ +ISG +G
Sbjct: 410 ACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPF 469
Query: 317 EALQVFSEILEEG--LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
E L+ FS +LE + PD +LS C + G Q + + K T+
Sbjct: 470 EGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG-N 528
Query: 375 CMVDLLGRAGMLREAYGLIKSMPIKPNDVV-WRSLLSACKVH 415
++++ + G ++ + + M K DVV W SL+SA H
Sbjct: 529 ALINMYSQCGTIQNSLEVFNQMSEK--DVVSWNSLISAYSRH 568
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 141/338 (41%), Gaps = 14/338 (4%)
Query: 77 KWGSMEYACSIFRQIEEPGSFE-YNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYP 135
K G +EYA +F ++ E +N MI G G+ D F +
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Query: 136 FLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD-- 193
+L C G + G Q+H V KAG V N LI+MY C + AC VFE+ D
Sbjct: 195 TILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
+ +++ +I A + + L++ M E R + T VSV+ +C +G
Sbjct: 254 VRDQVTFNVVIDGLAGFKR-DESLLVFRKM-LEASLRPTDLTFVSVMGSC---SCAAMGH 308
Query: 254 CIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHG 313
+HG+ ++ E +V + + MY VF+++ EK ++ MIS +
Sbjct: 309 QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAK 368
Query: 314 HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHY 373
G A+ V+ + G+ PD+ + +L+ ++ C KI+ +
Sbjct: 369 LGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEIS---- 424
Query: 374 GCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
++ + G + +A L+ ++ N + W +++S
Sbjct: 425 NALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISG 461
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 144/294 (48%), Gaps = 43/294 (14%)
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDEK-SVASWSAIIGAHACAEM-WHQC-LMLLG 221
D++ L+S K G I++A +VF+KM E+ VA W+A+I C E +H+ + L
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMIT--GCKESGYHETSVELFR 179
Query: 222 DMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKS 281
+M + G R ++ ++LS C + GS + G+ +H ++++ + V +LI MY
Sbjct: 180 EMHKLG-VRHDKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNC 237
Query: 282 GCIEKGVCVFQ--NMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVG 339
+ VF+ ++A + + ++ V+I GL+ E+L VF ++LE L P D+ +V
Sbjct: 238 QVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTFVS 296
Query: 340 VLSACSHAGL--------VNEGLQ--------------CFKNMQFEHKIKPTVQH----- 372
V+ +CS A + + G + F++ HK+ +++
Sbjct: 297 VMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 373 YGCMVDLLGRAGMLREAYGLIKSMPI---KPNDVVWRSLLSACKVHLNLEIGEI 423
+ M+ +A + + A + K M I KP++ + SLL+ L+L++ E+
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS---LDLDVLEM 407
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 225/477 (47%), Gaps = 35/477 (7%)
Query: 60 FCDSFCGSNLVATCALAKWGSMEYACSIF-RQIEEPGSFEYNTMIRGNVSIMNXXXXXXX 118
F DS + ++A A + G ++ A S+F R E + +NT+I G
Sbjct: 190 FVDSVARNAMIA--AYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 119 XXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGK 178
G+ D + +L S L +K G ++H V K G + FV +G++ +Y K
Sbjct: 248 AVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCK 307
Query: 179 CGAIKHACD-------------------------------VFEKMDEKSVASWSAIIGAH 207
CG +K+A +F+ + EK++ W+A+ +
Sbjct: 308 CGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY 367
Query: 208 ACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELN 267
L L + +VSVL AC G+ IHG LR ++
Sbjct: 368 LNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMD 427
Query: 268 VVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILE 327
+ T+ +DMY K G +E +F + E+ Y MI+G + HGH A++ Q F ++ E
Sbjct: 428 KKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE 487
Query: 328 EGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLR 387
G PD++ ++ +LSAC H GLV EG + FK+M + I P HY CM+DL G+A L
Sbjct: 488 GGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLD 547
Query: 388 EAYGLIKSMP-IKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMY 446
+A L++ + ++ + V+ + L+AC + N E+ + EKL ++ +N Y+ +AN Y
Sbjct: 548 KAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAY 607
Query: 447 ARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIH 503
A + +W+++ RIR +M K L G S +++ + F S D S E + IY M+H
Sbjct: 608 ASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLH 664
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 42/288 (14%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACS---------- 86
+L KS++ K+VHA VLK G + + F S +V K G+M+YA S
Sbjct: 269 VLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDV--YCKCGNMKYAESAHLLYGFGNL 326
Query: 87 ---------------------IFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXX 125
+F + E + M G +++
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIAN 386
Query: 126 GIG-PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKH 184
PD+ + +L ACSL ++ G +IHGH + G+ D + + MY KCG +++
Sbjct: 387 ETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEY 446
Query: 185 ACDVFEKMDEKSVASWSAIIGAHACAEMWHQC--LMLLGDMSREGHWRAEESTLVSVLSA 242
A +F+ E+ ++A+I CA H+ DM+ EG ++ +E T +++LSA
Sbjct: 447 AERIFDSSFERDTVMYNAMIA--GCAHHGHEAKSFQHFEDMT-EGGFKPDEITFMALLSA 503
Query: 243 CIHLGSPNLGRCIHGILLR--NISELNVVVKTSLIDMYVKSGCIEKGV 288
C H G G ++ NIS T +ID+Y K+ ++K +
Sbjct: 504 CRHRGLVLEGEKYFKSMIEAYNISP-ETGHYTCMIDLYGKAYRLDKAI 550
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 5/419 (1%)
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRG-NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFL 137
G M A +F +I P +N++I G + + PD + +
Sbjct: 349 GDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV 197
+ A + G +HG V K G +FV L+SMY K + A VF+ M E+ V
Sbjct: 409 ISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDV 468
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
W+ +I H+ + +M RE + R++ +L SV+ AC + G H
Sbjct: 469 VLWTEMIVGHSRLGNSELAVQFFIEMYREKN-RSDGFSLSSVIGACSDMAMLRQGEVFHC 527
Query: 258 ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAE 317
+ +R + + V +L+DMY K+G E +F + + M+ S HG +
Sbjct: 528 LAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEK 587
Query: 318 ALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMV 377
AL F +ILE G PD V Y+ +L+ACSH G +G + M+ E IK +HY CMV
Sbjct: 588 ALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK-EQGIKAGFKHYSCMV 646
Query: 378 DLLGRAGMLREAYGLIKSMPIKPNDV-VWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNP 436
+L+ +AG++ EA LI+ P N +WR+LLSAC NL+IG AAE++ L+P +
Sbjct: 647 NLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDT 706
Query: 437 GDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYK-FVSQDRSQPE 494
+++L+N+YA +W DVA +RR++ + PG S +E + F S D+S PE
Sbjct: 707 ATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 170/392 (43%), Gaps = 13/392 (3%)
Query: 30 NEQGWYPLLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCALAKW---GSMEY 83
N + L++ C +E+ +++ ++KLG+ + +V T L + G +E
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGY-----SDNVVVQTSVLGMYSSCGDLES 252
Query: 84 ACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSL 143
A IF + + +NTMI G++ G+ P F Y +L CS
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI 203
LG G IH + + D+ + N L+ MY CG ++ A VF ++ ++ SW++I
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNI 263
I + Q +++ + R R +E T + +SA G+ +HG + +
Sbjct: 373 ISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLG 432
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
E +V V T+L+ MY K+ E VF M E+ +T MI G S G+ A+Q F
Sbjct: 433 YERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFI 492
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRA 383
E+ E D V+ ACS ++ +G + F + + G +VD+ G+
Sbjct: 493 EMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKN 551
Query: 384 GMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
G E I S+ P+ W S+L A H
Sbjct: 552 GKY-ETAETIFSLASNPDLKCWNSMLGAYSQH 582
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 144/318 (45%), Gaps = 7/318 (2%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVG---DDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
L + C + +K QIH V AG G + + N LISMY +CG+++ A VF+KM
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 194 EKSVASWSAIIGAHA-CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
++V S++A+ A++ + L M+ E + + ST S++ C L +G
Sbjct: 160 HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFE-YVKPNSSTFTSLVQVCAVLEDVLMG 218
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
++ +++ NVVV+TS++ MY G +E +F + + ++ MI G +
Sbjct: 219 SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 313 GHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQH 372
+ L F +L G+ P Y VL+ CS G + G + + +
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL-ADLPL 337
Query: 373 YGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLN 432
++D+ G +REA+ + + PN V W S++S C + E + +L ++
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMS 396
Query: 433 PNNPGDYLVLANMYARAH 450
P +Y A + A A
Sbjct: 397 TPRPDEYTFSAAISATAE 414
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 145/318 (45%), Gaps = 11/318 (3%)
Query: 37 LLKRCKSMEEFK---QVHAHVLKLGFFCDS---FCGSNLVATCALAKWGSMEYACSIFRQ 90
L ++C S+ K Q+HA VL G + + +NL++ + GS+E A +F +
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM--YVRCGSLEQARKVFDK 157
Query: 91 IEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXG-IGPDNFIYPFLLKACSLLGGVKE 149
+ YN + + + P++ + L++ C++L V
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLM 217
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHAC 209
G ++ + K G D++ VQ ++ MY CG ++ A +F+ ++ + +W+ +I
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLK 277
Query: 210 AEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
+ LM +M G + T VL+ C LGS +LG+ IH ++ + S ++
Sbjct: 278 NDKIEDGLMFFRNMLMSG-VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP 336
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
+ +L+DMY G + + VF + + S+ +ISG S +G G +A+ ++ +L
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMS 396
Query: 330 LA-PDDVVYVGVLSACSH 346
PD+ + +SA +
Sbjct: 397 TPRPDEYTFSAAISATAE 414
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 9/188 (4%)
Query: 167 FVQNGLISMYGKCGAIKHACDVFEKMDEKSVAS---WSAIIGAHACAEMWHQCLMLLGDM 223
+ N LISMY +C +++ A VF+KM ++++ + SA+ + H ++ LG
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 224 SREGHWRAEE--STLVSVLSACIHLGSPNLGRCIHGILLR---NISELNVVVKTSLIDMY 278
E S++V + C+ + R IH ++L + + +LI MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 279 VKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAE-ALQVFSEILEEGLAPDDVVY 337
V+ G +E+ VF M ++ SY + S S + A A + + + E + P+ +
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 338 VGVLSACS 345
++ C+
Sbjct: 203 TSLVQVCA 210
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 199/352 (56%), Gaps = 2/352 (0%)
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
+F+ D N +I+ + + + AC +F++M EK+V SW+ +I + + +
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
L + M R+G + T VS+LSAC L G+ IH ++ +++ + N +V ++L+
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 276 DMYVKSGCIEKGVCVFQN--MAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
+MY KSG + +F N + ++ S+ MI+ + HGHG EA+++++++ + G P
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 334 DVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI 393
V Y+ +L ACSHAGLV +G++ FK++ + + +HY C+VDL GRAG L++ I
Sbjct: 434 AVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI 493
Query: 394 KSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWN 453
+ + + ++LSAC VH + I + +K+ ++ G Y++++N+YA K
Sbjct: 494 NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKRE 553
Query: 454 DVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQM 505
+ A +R +M +K L + PG S V+ ++ + FV D+S P+F+ + +++ +
Sbjct: 554 EAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 13/301 (4%)
Query: 81 MEYACSIFRQIEEPGSFEYNTMIRGNV-SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLK 139
M AC +F ++ E + TMI G V + N + P+ Y +L
Sbjct: 280 MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Query: 140 ACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEK--MDEKSV 197
ACS L G+ EG QIH + K+ + V + L++MY K G + A +F+ + ++ +
Sbjct: 340 ACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDL 399
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
SW+++I +A + + + M + G ++ T +++L AC H G G
Sbjct: 400 ISWNSMIAVYAHHGHGKEAIEMYNQMRKHG-FKPSAVTYLNLLFACSHAGLVEKGMEFFK 458
Query: 258 ILLRNIS-ELNVVVKTSLIDMYVKSGCIEKGVCVFQNM--AEKSRFSYTVMISGLSIHGH 314
L+R+ S L T L+D+ ++G + K V F N A SR Y ++S ++H
Sbjct: 459 DLVRDESLPLREEHYTCLVDLCGRAGRL-KDVTNFINCDDARLSRSFYGAILSACNVHNE 517
Query: 315 GAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
+ A +V ++LE G + D YV + + + G E + M+ + K K + G
Sbjct: 518 VSIAKEVVKKVLETG-SDDAGTYVLMSNIYAANGKREEAAE----MRMKMKEKGLKKQPG 572
Query: 375 C 375
C
Sbjct: 573 C 573
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 172 LISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDM--SREGHW 229
LI K G I A +F+ + E+ V +W+ +I + + LGDM +RE
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGY----------IKLGDMREARELFD 101
Query: 230 RAEESTLVSVLSACI--HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
R + V +A + +L S L I +L + + E NVV ++ID Y +SG I+K
Sbjct: 102 RVDSRKNVVTWTAMVSGYLRSKQLS--IAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKA 159
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVV-YVGVLSACSH 346
+ +F M E++ S+ M+ L G EA+ +F E + DVV + ++ +
Sbjct: 160 LELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLF-----ERMPRRDVVSWTAMVDGLAK 214
Query: 347 AGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP 397
G V+E + F M + I + M+ + + EA L + MP
Sbjct: 215 NGKVDEARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMP 260
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 19/270 (7%)
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI 203
LG ++E ++ V ++ ++S Y + + A +F++M E++V SW+ +
Sbjct: 90 LGDMREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTM 146
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGI-LLRN 262
I +A + + L L +M E +VS S L GR + L
Sbjct: 147 IDGYAQSGRIDKALELFDEMP--------ERNIVSWNSMVKAL--VQRGRIDEAMNLFER 196
Query: 263 ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVF 322
+ +VV T+++D K+G +++ +F M E++ S+ MI+G + + EA Q+F
Sbjct: 197 MPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLF 256
Query: 323 SEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGR 382
+ E A + + G + +N+ F M ++ I T G V+
Sbjct: 257 QVMPERDFASWNTMITGFIRNRE----MNKACGLFDRMPEKNVISWTTMITG-YVENKEN 311
Query: 383 AGMLREAYGLIKSMPIKPNDVVWRSLLSAC 412
L +++ +KPN + S+LSAC
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 184/329 (55%), Gaps = 7/329 (2%)
Query: 172 LISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRA 231
+I Y + G + A +F+K+ +K +W+ +I E++ + LL DM R G +
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG-LKP 464
Query: 232 EESTLVSVLSACIHLGSPNLGRCIHGILLRNIS--ELNVVVKTSLIDMYVKSGCIEKGVC 289
ST +LS+ + + G+ IH ++ + + + +++++ SL+ MY K G IE
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGL 349
+F M +K S+ MI GLS HG +AL +F E+L+ G P+ V ++GVLSACSH+GL
Sbjct: 525 IFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
Query: 350 VNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
+ GL+ FK M+ + I+P + HY M+DLLGRAG L+EA I ++P P+ V+ +LL
Sbjct: 585 ITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALL 644
Query: 410 SACKVHLNLE----IGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADK 465
C ++ + I E AA +L L+P N ++ L N+YA + + +R+EM K
Sbjct: 645 GLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIK 704
Query: 466 HLVQTPGFSMVEAERKVYKFVSQDRSQPE 494
+ +TPG S V + F+S D+S E
Sbjct: 705 GVKKTPGCSWVVVNGRANVFLSGDKSASE 733
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 105/273 (38%), Gaps = 46/273 (16%)
Query: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLL 138
G + A +F+++ + + MI G V G+ P N Y LL
Sbjct: 414 GDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Query: 139 KACSLLGGVKEGIQIHGHVFK--AGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS 196
+ + +G IH + K A D+ +QN L+SMY KCGAI+ A ++F KM +K
Sbjct: 474 SSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD 533
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
SW+++I + + + L L +M G + T + VLSAC H
Sbjct: 534 TVSWNSMIMGLSHHGLADKALNLFKEMLDSGK-KPNSVTFLGVLSACSH----------- 581
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS-----YTVMISGLSI 311
SG I +G+ +F+ M E Y MI L
Sbjct: 582 ------------------------SGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGR 617
Query: 312 HGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC 344
G EA + S + PD VY +L C
Sbjct: 618 AGKLKEAEEFISAL---PFTPDHTVYGALLGLC 647
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 180/451 (39%), Gaps = 55/451 (12%)
Query: 40 RCKSMEE----FKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPG 95
+C+ M E F+++ +V+ + C G E A +F ++ E
Sbjct: 120 KCRRMNEAWTLFREMPKNVVSWTVMLTALCDD-----------GRSEDAVELFDEMPERN 168
Query: 96 SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
+NT++ G + + D + ++K G++E + G
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFG 224
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
+ + ++ ++ Y + G ++ A +F +M E+++ SW+A+I A E++ +
Sbjct: 225 DMSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE 280
Query: 216 CLMLLGDMSREGHWRAEES-TLVSVLSACIHLGSP--NLGRCIHGILLRNISEL---NVV 269
LML +M ++ + TL+S+ AC LG LG +H ++ N E +
Sbjct: 281 ALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGR 340
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
+ SL+ MY SG I + + S ++I+ +G A +F +
Sbjct: 341 LAKSLVHMYASSGLIASAQSLLNESFDLQ--SCNIIINRYLKNGDLERAETLFERVKS-- 396
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
D V + ++ AG V+ F+ + + + TV M+ L + + EA
Sbjct: 397 -LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTV-----MISGLVQNELFAEA 450
Query: 390 YGLIKSM---PIKPNDVVWRSLLSACKVHLNLEIGE----IAAEKLFMLNPNNPGDYLVL 442
L+ M +KP + + LLS+ NL+ G+ + A+ +P+ L+L
Sbjct: 451 ASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPD-----LIL 505
Query: 443 AN----MYARAHKWNDVARIRREMADKHLVQ 469
N MYA+ D I +M K V
Sbjct: 506 QNSLVSMYAKCGAIEDAYEIFAKMVQKDTVS 536
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 272 TSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLA 331
TS+ID Y+++G + + +FQ + +K ++TVMISGL + AEA + S+++ GL
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 332 PDDVVYVGVLSACSHAGLVNEG--LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
P + Y +LS+ +++G + C + P + +V + + G + +A
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVI-AKTTACYDPDLILQNSLVSMYAKCGAIEDA 522
Query: 390 YGLIKSMPIKPNDVVWRSLLSACKVH 415
Y + M ++ + V W S++ H
Sbjct: 523 YEIFAKM-VQKDTVSWNSMIMGLSHH 547
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 206/390 (52%), Gaps = 14/390 (3%)
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
D ++ LL A + G E +++ + GV ++ N +I + G + A D+F
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 190 EKMDEKSVA----SWSAIIGA---HACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSA 242
+M + SW+ ++ + C+E + ++ L M G R ++ LSA
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSE---EAILFLRKMQESG-LRPNAFSITVALSA 555
Query: 243 CIHLGSPNLGRCIHGILLRNISELNVV-VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS 301
C HL S ++GR IHG ++RN+ ++V ++TSL+DMY K G I K VF +
Sbjct: 556 CAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
MIS +++G+ EA+ ++ + GL PD++ VLSAC+HAG +N+ ++ F ++
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIG 421
+ +KP ++HYG MVDLL AG +A LI+ MP KP+ + +SL+++C E+
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELV 735
Query: 422 EIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVE--AE 479
+ + KL P N G+Y+ ++N YA W++V ++R M K L + PG S ++ E
Sbjct: 736 DYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGE 795
Query: 480 RKVYKFVSQDRSQPEFDTIYNMIHQMEWQL 509
V+ FV+ D++ + I M+ + + +
Sbjct: 796 EGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 187/392 (47%), Gaps = 16/392 (4%)
Query: 28 RFNEQGWYPLLKRC---KSMEEFKQVHAHVLKLGFFC--DSFCGSNLVATCALAKWGSME 82
R + + +L+ C + + KQ+HA +LK G F + + + LV AK ++E
Sbjct: 67 RIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLV--IFYAKCDALE 124
Query: 83 YACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACS 142
A +F ++ F + +I I I PDNF+ P + KAC
Sbjct: 125 IAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACG 184
Query: 143 LLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSA 202
L + G +HG+V K+G+ D +FV + L MYGKCG + A VF+++ +++ +W+A
Sbjct: 185 ALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNA 244
Query: 203 IIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN 262
++ + + + L DM ++G T+ + LSA ++G G+ H I + N
Sbjct: 245 LMVGYVQNGKNEEAIRLFSDMRKQG-VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN 303
Query: 263 ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVF 322
EL+ ++ TSL++ Y K G IE VF M EK ++ ++ISG G +A+ +
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 323 SEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ---FEHKIKPTVQHYGCMVDL 379
+ E L D V ++SA + E L+ K +Q H + + ++D+
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAAR----TENLKLGKEVQCYCIRHSFESDIVLASTVMDM 419
Query: 380 LGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+ G + +A + S ++ + ++W +LL+A
Sbjct: 420 YAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 171/377 (45%), Gaps = 7/377 (1%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNV 107
+ VH +V+K G F S+L K G ++ A +F +I + + +N ++ G V
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADM--YGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
G+ P L A + +GGV+EG Q H G+ D
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
+ L++ Y K G I++A VF++M EK V +W+ II + + + + M E
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE- 369
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKG 287
+ + TL +++SA + LG+ + +R+ E ++V+ ++++DMY K G I
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 288 VCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
VF + EK + +++ + G EAL++F + EG+ P+ + + ++ +
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVV 404
G V+E F MQ I P + + M++ + + G EA ++ M ++PN
Sbjct: 490 GQVDEAKDMFLQMQ-SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
Query: 405 WRSLLSACKVHLNLEIG 421
LSAC +L IG
Sbjct: 549 ITVALSACAHLASLHIG 565
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 74 ALAKWGSMEYACSIFRQIEE----PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
+L + G ++ A +F Q++ P + TM+ G V G+ P
Sbjct: 485 SLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRP 544
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF-VQNGLISMYGKCGAIKHACDV 188
+ F L AC+ L + G IHG++ + + ++ L+ MY KCG I A V
Sbjct: 545 NAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
F + +A+I A+A + + L + G + + T+ +VLSAC H G
Sbjct: 605 FGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG-LKPDNITITNVLSACNHAGD 663
Query: 249 PN 250
N
Sbjct: 664 IN 665
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 229/485 (47%), Gaps = 43/485 (8%)
Query: 35 YPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEP 94
+ L++ S+ QVHA ++ G F DS L+ + + ++G Y SI+R I +
Sbjct: 26 FKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSS--RFGDSSYTVSIYRSIGK- 82
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIH 154
+ N + + + + G PD++ + L+ V G H
Sbjct: 83 -LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCH 141
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIK------------------------------- 183
G K G + VQN L+ MY CGA+
Sbjct: 142 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 201
Query: 184 HACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSAC 243
A +F++M +K++ SW+ +I A+ A + L +M R G ++ ESTLV +L+AC
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAG-FQGNESTLVLLLNAC 260
Query: 244 IHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC--VFQNMAEKSRFS 301
GR +H L+R +VV+ T+LIDMY K C E G+ +F +++ +++ +
Sbjct: 261 GRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGK--CKEVGLARRIFDSLSIRNKVT 318
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
+ VMI +HG L++F ++ L PD+V +VGVL C+ AGLV++G + M
Sbjct: 319 WNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMV 378
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSACKVHLNL 418
E +IKP H CM +L AG EA +K++P + P W +LLS+ + N
Sbjct: 379 DEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNP 438
Query: 419 EIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEA 478
+GE A+ L +P N Y +L N+Y+ +W DV R+R + ++ + + PG +V+
Sbjct: 439 TLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDL 498
Query: 479 ERKVY 483
+ V+
Sbjct: 499 KEIVH 503
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 192/384 (50%), Gaps = 37/384 (9%)
Query: 130 DNFIYPFLLKACS--LLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACD 187
D+F Y FLLKA S + GI +HG K G ++VQ L+ MY G + A
Sbjct: 120 DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHK 179
Query: 188 VF-------------------------------EKMDEKSVASWSAIIGAHACAEMWHQC 216
VF EKM ++V SW+ II +A + +
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEA 239
Query: 217 LMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL-LRNISELNVVVKTSLI 275
++L M + E T++++L A +LG + +H + R ++ V SLI
Sbjct: 240 ILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLI 299
Query: 276 DMYVKSGCIEKGVCVFQNM--AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
D Y K GCI+ F + K+ S+T MIS +IHG G EA+ +F ++ GL P+
Sbjct: 300 DAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPN 359
Query: 334 DVVYVGVLSACSHAGLVNEG-LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL 392
V + VL+ACSH GL E L+ F M E+KI P V+HYGC+VD+L R G L EA +
Sbjct: 360 RVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Query: 393 IKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKW 452
+PI+ VVWR LL AC V+ + E+ E KL L ++ GDY++++N++ ++
Sbjct: 420 ALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRF 479
Query: 453 NDVARIRREMADKHLVQTPGFSMV 476
D R R++M + + + PG S V
Sbjct: 480 LDAQRFRKQMDVRGVAKLPGHSQV 503
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 231/499 (46%), Gaps = 29/499 (5%)
Query: 18 TPPQCSELSTRFNEQGWYPLLKRCKSMEEF---KQVHAHVLKLGF-FCDSFCGSNLVATC 73
T P C +++ +LK C ME+ + VH ++ GF D F ++L+
Sbjct: 222 TEPDCVTVTS---------VLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDM- 271
Query: 74 ALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFI 133
+K ++ A +F + +N+++ G V + D
Sbjct: 272 -YSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVT 330
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
LL+ C IHG + + G + + LI Y C + A V + M
Sbjct: 331 VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT 390
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
K V S S +I A A + + + M + T++S+L+AC +
Sbjct: 391 YKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPN----AITVISLLNACSVSADLRTSK 446
Query: 254 CIHGILLRNISELN-VVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
HGI +R +N + V TS++D Y K G IE F + EK+ S+TV+IS +I+
Sbjct: 447 WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN 506
Query: 313 GHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQH 372
G +AL +F E+ ++G P+ V Y+ LSAC+H GLV +GL FK+M E KP++QH
Sbjct: 507 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM-VEEDHKPSLQH 565
Query: 373 YGCMVDLLGRAGMLREAYGLIKSMP--IKPNDVVWRSLLSACKVHLNLEI--GEIAAEKL 428
Y C+VD+L RAG + A LIK++P +K W ++LS C+ I E+ AE L
Sbjct: 566 YSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL 625
Query: 429 FMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQ 488
L P YL+ ++ +A W DVA +RR + ++ + G+SMV +F++
Sbjct: 626 -ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAG 684
Query: 489 DR---SQPEFDTIYNMIHQ 504
D+ S E + + +H+
Sbjct: 685 DKLSQSDSELNDVVQSLHR 703
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 166/384 (43%), Gaps = 50/384 (13%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G P+ ++ AC L +G +IHG+V ++G VQN ++ MY ++ A
Sbjct: 122 GFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-A 178
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
+F++M E+ V SWS +I ++ ++ L L +M E + T+ SVL AC
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 246 LGSPNLGRCIHGILLRNISEL-NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
+ ++GR +HG +R +L +V V SLIDMY K ++ VF ++ S+
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNS 298
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC-------------------- 344
+++G + EAL++F +++E + D+V V +L C
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 345 ---------------SHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
+ LV++ +M ++ + + M+ L AG EA
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCST-----MISGLAHAGRSDEA 413
Query: 390 YGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGE----IAAEKLFMLNPNNPGDYLVLANM 445
+ M PN + SLL+AC V +L + IA + +N + G +V +
Sbjct: 414 ISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV--DA 471
Query: 446 YARAHKWNDVARIRREMADKHLVQ 469
YA+ R ++ +K+++
Sbjct: 472 YAKCGAIEMARRTFDQITEKNIIS 495
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 36/223 (16%)
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
D F++P + KAC+ L + +G N + Y KCG + F
Sbjct: 44 DPFVFPIVFKACAKLSWLFQG-------------------NSIADFYMKCGDLCSGLREF 84
Query: 190 EKMDEKSVASWSAII------GAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSAC 243
+ M+ + SW+ I+ G W L + G + STLV V+ AC
Sbjct: 85 DCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG-------FEPNTSTLVLVIHAC 137
Query: 244 IHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYT 303
L G IHG ++R+ V+ S++ MY S + +F M+E+ S++
Sbjct: 138 RSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARK-LFDEMSERDVISWS 194
Query: 304 VMISGLSIHGHGAEALQVFSEILEEG-LAPDDVVYVGVLSACS 345
V+I L++F E++ E PD V VL AC+
Sbjct: 195 VVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 193/398 (48%), Gaps = 36/398 (9%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
L+ C + + KQ+H ++K D L++ + +G +YA +F Q++ P +
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSS--SFGETQYASLVFNQLQSPST 83
Query: 97 FEYNTMIRG-NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
F +N MIR +V+ D F +PF++KAC ++ G Q+HG
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS------------------- 196
KAG +D+F QN L+ +Y KCG VF+KM +S
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 197 ------------VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI 244
V SW+A+I A+ + L M + + E T+V++L A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD-DVKPNEFTIVNLLQAST 262
Query: 245 HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
LGS ++GR +H +N L+ + T+LIDMY K G ++ VF M KS ++
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 305 MISGLSIHGHGAEALQVFSEILEEG-LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE 363
MI+ L +HG G EAL +F E+ EE + PD + +VGVLSAC++ G V +GL+ F M
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQV 382
Query: 364 HKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPN 401
+ I P +H CM+ LL +A + +A L++SM P+
Sbjct: 383 YGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 8/233 (3%)
Query: 136 FLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK 195
+ L+ CS +K QIH + K + +D + LIS+ G ++A VF ++
Sbjct: 25 YFLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 196 SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCI 255
S +W+ +I + + + L+L M + ++ T V+ AC+ S LG +
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 256 HGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHG 315
HG+ ++ +V + +L+D+Y K G + G VF M +S S+T M+ GL +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 316 AEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKP 368
A VF+++ + V + +++A +E Q F+ MQ + +KP
Sbjct: 202 DSAEIVFNQMPMRNV----VSWTAMITAYVKNRRPDEAFQLFRRMQVD-DVKP 249
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 216/464 (46%), Gaps = 37/464 (7%)
Query: 82 EYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKAC 141
E A +F ++ + +F +N MI G+ PD + + L+ AC
Sbjct: 155 EAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNAC 214
Query: 142 SL-LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGA------------------- 181
S V G +H + K G + +N ++S Y K G+
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 182 --IKHAC----------DVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
I AC +VF EK++ +W+ +I + Q L +M + G
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGV- 333
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
++ +VL AC L G+ IHG L+ + V +L+++Y K G I++
Sbjct: 334 DSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADR 393
Query: 290 VFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGL 349
F ++A K S+ M+ +HG +AL+++ ++ G+ PD+V ++G+L+ CSH+GL
Sbjct: 394 AFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGL 453
Query: 350 VNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKS----MPIKPNDVVW 405
V EG F++M +++I V H CM+D+ GR G L EA L + + N+ W
Sbjct: 454 VEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSW 513
Query: 406 RSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADK 465
+LL AC H + E+G ++ L + P+ +++L+N+Y +W + +RREM ++
Sbjct: 514 ETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVER 573
Query: 466 HLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQL 509
+ +TPG S +E +V FV D S P + + ++ ++ ++
Sbjct: 574 GMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEM 617
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 168/415 (40%), Gaps = 84/415 (20%)
Query: 74 ALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFI 133
+LAK G + A +F + E + +NTM+ + PD++
Sbjct: 13 SLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYS 72
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCG------------- 180
+ +L C+ LG VK G +I V ++G + V N LI MYGKC
Sbjct: 73 FTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMC 132
Query: 181 --------------------AIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLL 220
+ A DVF +M ++ +W+ +I HA CL L
Sbjct: 133 CDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLF 192
Query: 221 GDMSREGHWRAEESTLVSVLSACIHLGSPNL--GRCIHGILLRN---------------- 262
+M E ++ + T S+++AC S N+ GR +H ++L+N
Sbjct: 193 KEM-LESEFKPDCYTFSSLMNAC-SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFY 250
Query: 263 ---------------ISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMIS 307
I L V S+ID +K G EK + VF EK+ ++T MI+
Sbjct: 251 TKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMIT 310
Query: 308 GLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIK 367
G +G G +AL+ F E+++ G+ D Y VL ACS L+ G M I
Sbjct: 311 GYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-----KMIHGCLIH 365
Query: 368 PTVQHYG----CMVDLLGRAGMLRE---AYGLIKSMPIKPNDVVWRSLLSACKVH 415
Q Y +V+L + G ++E A+G I + + V W ++L A VH
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDL----VSWNTMLFAFGVH 416
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 133/325 (40%), Gaps = 42/325 (12%)
Query: 173 ISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAE 232
I+ K G I A VF+ M E +W+ ++ +++ + + + L + R + +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL-RFSDAKPD 69
Query: 233 ESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVK------------ 280
+ + ++LS C LG+ GR I +++R+ ++ V SLIDMY K
Sbjct: 70 DYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 281 ----------SGC-----------IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEAL 319
+ C E + VF M ++ F++ +MISG + G L
Sbjct: 130 DMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCL 189
Query: 320 QVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDL 379
+F E+LE PD + +++ACS + + ++ V+ ++
Sbjct: 190 SLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSF 249
Query: 380 LGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEI-AAEKLFMLNP-NNPG 437
+ G +A ++S+ + V W S++ AC ++IGE A ++F L P N
Sbjct: 250 YTKLGSRDDAMRELESIEV-LTQVSWNSIIDAC-----MKIGETEKALEVFHLAPEKNIV 303
Query: 438 DYLVLANMYARAHKWNDVARIRREM 462
+ + Y R R EM
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEM 328
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 25/179 (13%)
Query: 266 LNVVVK-TSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSE 324
++V+V+ TS I KSG I VF M E ++ M++ S G EA+ +F++
Sbjct: 1 MSVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ 60
Query: 325 ILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG---------C 375
+ PDD + +LS C+ G N++F KI+ V G
Sbjct: 61 LRFSDAKPDDYSFTAILSTCASLG----------NVKFGRKIQSLVIRSGFCASLPVNNS 110
Query: 376 MVDLLGRAGMLREAYGLIKSMPIKP-NDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNP 433
++D+ G+ A + + M N+V W SLL A ++N E E AA +F+ P
Sbjct: 111 LIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFA---YMNAEQFE-AALDVFVEMP 165
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 214/434 (49%), Gaps = 26/434 (5%)
Query: 52 AHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRG------ 105
A V LGF D CGS +V A +K G + A +F I +P +N MI G
Sbjct: 132 AIVSGLGF--DQICGSAIVK--AYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGF 187
Query: 106 ---NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGV 162
+++ N I P LL +H K +
Sbjct: 188 WDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLV---------AWSVHAFCLKINL 238
Query: 163 GDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGD 222
+V L++MY +C I AC VF + E + + S++I ++ + L L +
Sbjct: 239 DSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAE 298
Query: 223 MSREGHWRAEESTLVS-VLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKS 281
+ G + + LV+ VL +C L G+ +H ++R EL++ V ++LIDMY K
Sbjct: 299 LRMSG--KKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKC 356
Query: 282 GCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVL 341
G ++ + +F + EK+ S+ +I GL +HG + A + F+EILE GL PD++ + +L
Sbjct: 357 GLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALL 416
Query: 342 SACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPN 401
C H+GL+N+G + F+ M+ E I+P +HY MV L+G AG L EA+ + S+ +
Sbjct: 417 CTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPID 476
Query: 402 DVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDY-LVLANMYARAHKWNDVARIRR 460
+ +LLS C+VH N + E+ AE + Y ++L+N+YAR +W++V R+R
Sbjct: 477 SGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRD 536
Query: 461 EMADKHLVQTPGFS 474
+++ + + PG S
Sbjct: 537 GISESYGGKLPGIS 550
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 161/381 (42%), Gaps = 5/381 (1%)
Query: 35 YPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEP 94
Y ++ ++ +++H+ V K D + + L AL + A +F E
Sbjct: 12 YEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALND--DLISARKLFDVFPER 69
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIH 154
F +N++IR PDNF Y L + S K IH
Sbjct: 70 SVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIH 129
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWH 214
G +G+G D + ++ Y K G I A +F + + +A W+ +I + C W
Sbjct: 130 GIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWD 189
Query: 215 QCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
+ + L M GH + T+V++ S I + +H L+ + + V +L
Sbjct: 190 KGINLFNLMQHRGH-QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCAL 248
Query: 275 IDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDD 334
++MY + CI VF +++E + + +I+G S G+ EAL +F+E+ G PD
Sbjct: 249 VNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDC 308
Query: 335 VVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIK 394
V+ VL +C+ G + + ++ ++ ++D+ + G+L+ A L
Sbjct: 309 VLVAIVLGSCAELSDSVSGKE-VHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFA 367
Query: 395 SMPIKPNDVVWRSLLSACKVH 415
+P K N V + SL+ +H
Sbjct: 368 GIPEK-NIVSFNSLILGLGLH 387
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 9/208 (4%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
VHA LK+ S+ G LV ++ + ACS+F I EP +++I G
Sbjct: 228 SVHAFCLKINLDSHSYVGCALVNM--YSRCMCIASACSVFNSISEPDLVACSSLITGYSR 285
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
N G PD + +L +C+ L G ++H +V + G+ DI V
Sbjct: 286 CGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKV 345
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII---GAHACAEMWHQCLMLLGDMSR 225
+ LI MY KCG +K A +F + EK++ S++++I G H A + + +M
Sbjct: 346 CSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMG- 404
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGR 253
+E T ++L C H G N G+
Sbjct: 405 ---LIPDEITFSALLCTCCHSGLLNKGQ 429
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 228/466 (48%), Gaps = 20/466 (4%)
Query: 21 QCSELSTRFNEQGWYPLLKRCKSM---EEFKQVHAHVLKLGFFCDSFCGSNLVATCALAK 77
Q S + + P+L C + E +QVHA ++K G + + L+ +K
Sbjct: 74 QIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDM--YSK 131
Query: 78 WGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFL 137
+G + + +F +EE +N ++ G + + F +
Sbjct: 132 YGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSV 191
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD-EKS 196
+K C+ L +++G Q+H V G D + + +IS Y G I A V+ ++
Sbjct: 192 VKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTD 250
Query: 197 VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIH 256
+++I + + +L MSR+ R L S L+ C +G+ IH
Sbjct: 251 EVMLNSLISGCIRNRNYKEAFLL---MSRQ---RPNVRVLSSSLAGCSDNSDLWIGKQIH 304
Query: 257 GILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGA 316
+ LRN + + L+DMY K G I + +F+ + KS S+T MI +++G G
Sbjct: 305 CVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGV 364
Query: 317 EALQVFSEILEEG--LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
+AL++F E+ EEG + P+ V ++ V+SAC+HAGLV EG +CF M+ ++++ P +HY
Sbjct: 365 KALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV 424
Query: 375 CMVDLLGRAGMLREAYGLIKSMPIKPND----VVWRSLLSACKVHLNLEIGEIAAEKLF- 429
C +D+L +AG E + L++ M N +W ++LSAC ++++L GE A +L
Sbjct: 425 CFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLME 484
Query: 430 MLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSM 475
P N Y++++N YA KW+ V +R ++ +K LV+T G S+
Sbjct: 485 ETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 174/310 (56%), Gaps = 3/310 (0%)
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW 229
N ++S Y G ++ A FEK EK SW++II A+ + + + + L M+ EG
Sbjct: 347 NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE- 405
Query: 230 RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
+ + TL S+LSA L + LG +H I+++ + +V V +LI MY + G I +
Sbjct: 406 KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRR 464
Query: 290 VFQNMAEKSR-FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAG 348
+F M K ++ MI G + HG+ +EAL +F + G+ P + +V VL+AC+HAG
Sbjct: 465 IFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAG 524
Query: 349 LVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSL 408
LV+E F +M +KI+P ++HY +V++ G EA +I SMP +P+ VW +L
Sbjct: 525 LVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGAL 584
Query: 409 LSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLV 468
L AC+++ N+ + +AAE + L P + Y++L NMYA W++ +++R M K +
Sbjct: 585 LDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIK 644
Query: 469 QTPGFSMVEA 478
+ G S V++
Sbjct: 645 KERGSSWVDS 654
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 14/293 (4%)
Query: 76 AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYP 135
A G++E A F + E + +N++I + G PD
Sbjct: 354 ASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT 413
Query: 136 FLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD-E 194
LL A + L ++ G+Q+H V K V D+ V N LI+MY +CG I + +F++M +
Sbjct: 414 SLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLK 472
Query: 195 KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRC 254
+ V +W+A+IG +A + L L G M G + T VSVL+AC H G + +
Sbjct: 473 REVITWNAMIGGYAFHGNASEALNLFGSMKSNGIY-PSHITFVSVLNACAHAGLVDEAKA 531
Query: 255 IHGILLRNISELNVVVK--TSLIDMYVKSGCIEKGVCVFQNMA-EKSRFSYTVMISGLSI 311
+ + ++ ++ ++ +SL+++ G E+ + + +M E + + ++ I
Sbjct: 532 -QFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRI 590
Query: 312 H---GHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
+ G A + S + E P YV + + + GL +E Q NM+
Sbjct: 591 YNNVGLAHVAAEAMSRLEPESSTP----YVLLYNMYADMGLWDEASQVRMNME 639
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 191/386 (49%), Gaps = 6/386 (1%)
Query: 76 AKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYP 135
AK G A F ++ + +N + +G I + G+ PD+
Sbjct: 447 AKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMV 506
Query: 136 FLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD-E 194
+L+ C+ G ++G + K G + V + LI+M+ KC A+ A +F+K E
Sbjct: 507 GMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFE 566
Query: 195 KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRC 254
KS SW+ ++ + + + M E ++ T V+++ A L + +G
Sbjct: 567 KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVE-KFQPNAVTFVNIVRAAAELSALRVGMS 625
Query: 255 IHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGH 314
+H L++ V SL+DMY K G IE F ++ K S+ M+S + HG
Sbjct: 626 VHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGL 685
Query: 315 GAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYG 374
+ A+ +F + E L PD V ++ VLSAC HAGLV EG + F+ M HKI+ V+HY
Sbjct: 686 ASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYA 745
Query: 375 CMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPN 434
CMVDLLG+AG+ EA +++ M +K + VW +LL++ ++H NL + A +L L P
Sbjct: 746 CMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPL 805
Query: 435 NPGDYLVLANMYARAHKWNDVARIRR 460
NP Y + R + N+V+RI++
Sbjct: 806 NPSHY----SQDRRLGEVNNVSRIKK 827
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 2/272 (0%)
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI 203
+G + +GI IH + + G+ D+ V L+SMY KCG ++ A +F ++++ V SWSA+
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAM 372
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNI 263
I ++ A + + L DM R H + TL SVL C + + LG+ IH ++
Sbjct: 373 IASYEQAGQHDEAISLFRDMMRI-HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD 431
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
E + T++I MY K G + F+ + K ++ + G + G +A V+
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYK 491
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRA 383
+ G+ PD VG+L C+ G C +H ++++ +
Sbjct: 492 NMKLHGVCPDSRTMVGMLQTCAFCSDYARG-SCVYGQIIKHGFDSECHVAHALINMFTKC 550
Query: 384 GMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
L A L + + V W +++ +H
Sbjct: 551 DALAAAIVLFDKCGFEKSTVSWNIMMNGYLLH 582
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 171/415 (41%), Gaps = 53/415 (12%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGS 96
+L+ CK+ QVH ++ G + L+ +L + + IF + +PG
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGLKPHN----QLINAYSLFQRQDLSRV--IFDSVRDPGV 64
Query: 97 FEYNTMIRGNVSI-MNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHG 155
+N+MIRG ++ GI PD + + F LKAC+ K+G++IH
Sbjct: 65 VLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHD 124
Query: 156 HVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQ 215
+ + G+ D+++ L+ MY K + A VF+KM K V +W+ ++ A
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
L+L DM R + +L +++ A L ++ RC+HG++++ + LI
Sbjct: 185 ALLLFHDM-RSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK--GFIFAFSSGLI 241
Query: 276 DMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEI---------- 325
DMY + VF+ + K S+ M++ + +G E L++F +
Sbjct: 242 DMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKV 301
Query: 326 -------------------------LEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM 360
+++GL D V ++S S G + Q F N+
Sbjct: 302 AAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINI 361
Query: 361 QFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSAC 412
+ V + M+ +AG EA L + M IKPN V S+L C
Sbjct: 362 E-----DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 190/399 (47%), Gaps = 69/399 (17%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ D FI P LLKA L + G IH V K D F+ + LI MY K G + +A
Sbjct: 112 GLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNA 171
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG----------------HW 229
VF + E+ + ++A+I +A + L L+ DM G H
Sbjct: 172 RKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHM 231
Query: 230 RAEES------------------TLVSVLSACIH-------------------------- 245
R EE + S++S +H
Sbjct: 232 RNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATI 291
Query: 246 ---------LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE 296
L G+ IHG + E + V+++L+DMY K G I + + +F+ +
Sbjct: 292 ITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPK 351
Query: 297 KSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
K+ ++ MI + HG +A+++F ++ G D + + +L+ACSHAGL + G
Sbjct: 352 KTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNL 411
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHL 416
F MQ +++I P ++HY CMVDLLGRAG L EAY +IK+M ++P+ VW +LL+AC+ H
Sbjct: 412 FLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Query: 417 NLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDV 455
N+E+ IAA+ L L P N G+ L+L ++YA A W V
Sbjct: 472 NMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 5/266 (1%)
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHAC 209
G +H H+ +G+ + L++ Y +CG + A VF++M ++ ++ +IGA A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 210 AEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
+ + L +M ++G + + + S+L A +L G+ IH ++L+ E +
Sbjct: 95 NGYYQESLDFFREMYKDG-LKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG 329
+ +SLIDMY K G + VF ++ E+ + MISG + + EAL + ++ G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
+ PD + + ++S SH + + + M + KP V + ++ L +A
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKA 272
Query: 390 YGLIKSM---PIKPNDVVWRSLLSAC 412
+ K M + PN +LL AC
Sbjct: 273 FDAFKQMLTHGLYPNSATIITLLPAC 298
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 188/354 (53%), Gaps = 18/354 (5%)
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
+ +H + ++ ++ S+I+MY G +E + VF +M E++ ++ +I + +
Sbjct: 201 KVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKN 260
Query: 313 GHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQH 372
G G +A+ FS +EG PD ++ + AC G +NEGL F++M E+ I P ++H
Sbjct: 261 GQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEH 320
Query: 373 YGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLN 432
Y +V +L G L EA ++SM +PN +W +L++ +VH +L +G+ + + L+
Sbjct: 321 YVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
Query: 433 PNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYKFVSQ-DRS 491
+R +K + + + +D LV+ M + ++++ D S
Sbjct: 379 A-------------SRLNKESKAGLVPVKSSD--LVKEKLQRMAKGPNYGIRYMAAGDIS 423
Query: 492 QPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTS 551
+PE +Y + ++ + GY P + L DVD++ K E L +H+++ A T + T
Sbjct: 424 RPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTP 483
Query: 552 EGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
S +R+ +NLR+C+DCH K +SKI RE+ RD RFHH KDG CSC++YW
Sbjct: 484 ARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 211/446 (47%), Gaps = 18/446 (4%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCALA----KWGSMEYACSIFRQIEEPGSFEYNTMI 103
+Q+H + + C NLV ++ + G +YA S+F +E+ +N +I
Sbjct: 153 EQIHGNAI-----CSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLI 207
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
N I PD + ++ CS L + +G Q K G
Sbjct: 208 LSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFL 267
Query: 164 DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQC---LMLL 220
+ V I M+ KC + + +F ++++ +++IG+++ WH C + L
Sbjct: 268 SNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS----WHCCGEDALRL 323
Query: 221 GDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVK 280
++ R ++ T SVLS+ ++ + G +H ++++ +L+ V TSL++MY K
Sbjct: 324 FILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFK 382
Query: 281 SGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEIL-EEGLAPDDVVYVG 339
+G ++ + VF K + +I GL+ + E+L +F+++L + L PD V +G
Sbjct: 383 TGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMG 442
Query: 340 VLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK 399
+L AC +AG VNEG+Q F +M+ H + P +HY C+++LL R GM+ EA + +P +
Sbjct: 443 ILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFE 502
Query: 400 PNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIR 459
P+ +W +L A + + E A+ + P + YLVL +Y +W + ++R
Sbjct: 503 PSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLR 562
Query: 460 REMADKHLVQTPGFSMVEAERKVYKF 485
M + L G S + E V+ F
Sbjct: 563 YAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 11/274 (4%)
Query: 74 ALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFI 133
L K G + A +F ++ E +NTMI G VS I P F
Sbjct: 79 GLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFT 138
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGD-DIFVQNGLISMYGKCGAIKHACDVFEKM 192
+ L SL+ V+ G QIHG+ +GV ++ V N ++ MY + G +A VF M
Sbjct: 139 FSIL---ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTM 195
Query: 193 DEKSVASWSAIIGAHACAEMWHQCLMLLGD---MSREGHWRAEESTLVSVLSACIHLGSP 249
+++ V SW+ +I +C++ ++ + L D + RE + +E T+ V+S C L
Sbjct: 196 EDRDVVSWNCLI--LSCSDSGNKEVAL--DQFWLMREMEIQPDEYTVSMVVSICSDLREL 251
Query: 250 NLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGL 309
+ G+ + ++ N +V + IDM+ K ++ V +F+ + + MI
Sbjct: 252 SKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY 311
Query: 310 SIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
S H G +AL++F + + + PD + VLS+
Sbjct: 312 SWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 23/247 (9%)
Query: 178 KCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW--RAEEST 235
K G + +A D+F++M E+ V SW+ +I + + DM R W R E T
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR---WEIRPTEFT 138
Query: 236 --LVSVLSACIHLGSPNLGRCIHG-ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQ 292
+++ L C+ G IHG + +S N+VV S++DMY + G + + VF
Sbjct: 139 FSILASLVTCVRHGEQ-----IHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFL 193
Query: 293 NMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNE 352
M ++ S+ +I S G+ AL F + E + PD+ V+S CS +++
Sbjct: 194 TMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSK 253
Query: 353 GLQ----CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSL 408
G Q C K + I G +D+ + L ++ L + + K + V+ S+
Sbjct: 254 GKQALALCIKMGFLSNSIV-----LGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSM 307
Query: 409 LSACKVH 415
+ + H
Sbjct: 308 IGSYSWH 314
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 185/370 (50%), Gaps = 29/370 (7%)
Query: 236 LVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA 295
V + +C +L S + +H L++ + + +I M+ + I VF +M
Sbjct: 239 FVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMV 298
Query: 296 EKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ 355
+K S+ +M+ S +G G +AL +F E+ + GL P++ ++ V AC+ G + E
Sbjct: 299 DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFL 358
Query: 356 CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH 415
F +M+ EH I P +HY ++ +LG+ G L EA I+ +P +P W ++ + ++H
Sbjct: 359 HFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLH 418
Query: 416 LNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLVQTPGFSM 475
++++ + E + ++P+ + N K +T +M
Sbjct: 419 GDIDLEDYMEELMVDVDPSK-----AVINKIPTP-------------PPKSFKET---NM 457
Query: 476 VEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLK 535
V ++ ++ +F + T Y + + Y PDT VL D+D++ K + L
Sbjct: 458 VTSKSRILEFRNL--------TFYKDEAKEMAAKKGVVYVPDTRFVLHDIDQEAKEQALL 509
Query: 536 HHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFK 595
+HS++LAIA+ +I T + I +NLR+C DCH + K +SKI R + VRD RFHHFK
Sbjct: 510 YHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFK 569
Query: 596 DGACSCKDYW 605
DG CSC DYW
Sbjct: 570 DGKCSCGDYW 579
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G PD + L ++C+ L ++ ++H H ++ D + N +ISM+G+C +I A
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
VF+ M +K + SW ++ A++ M L L +M++ G + E T ++V AC
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG-LKPNEETFLTVFLACAT 349
Query: 246 LG 247
+G
Sbjct: 350 VG 351
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 160/300 (53%), Gaps = 3/300 (1%)
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
DN ++L CS + V+ G Q HG +++ G ++ V N L+ MYGKCG ++ A F
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 190 EKMDE-KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
+M E + SW+A++ A Q L M E + + TL ++L+ C ++ +
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA--KPSKYTLATLLAGCANIPA 511
Query: 249 PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISG 308
NLG+ IHG L+R+ +++VV++ +++DMY K C + + VF+ A + + +I G
Sbjct: 512 LNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRG 571
Query: 309 LSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKP 368
+G E ++F + EG+ PD V ++G+L AC G V G Q F +M ++ I P
Sbjct: 572 CCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISP 631
Query: 369 TVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKL 428
V+HY CM++L + G L + + MP P + + AC+ + ++G AA++L
Sbjct: 632 QVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 171/421 (40%), Gaps = 41/421 (9%)
Query: 27 TRFNEQGWYPLLKRCK---SMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEY 83
R E + +LK C + +Q+H V+K G+ + +++V K M
Sbjct: 158 VRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDV--YGKCRVMSD 215
Query: 84 ACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSL 143
A +F +I P +N ++R + + + P N ++ ACS
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKC------------------------ 179
++ G IH K V D V + MY KC
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 180 -------GAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAE 232
G + A ++F+ M E+++ SW+A++G + A W + L L M +E +
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE-NID 394
Query: 233 ESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQ 292
TLV +L+ C + +G+ HG + R+ + NV+V +L+DMY K G ++ F+
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFR 454
Query: 293 NMAE-KSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVN 351
M+E + S+ +++G++ G +AL F + E P +L+ C++ +N
Sbjct: 455 QMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALN 513
Query: 352 EGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
G + K V G MVD+ + A + K + + ++W S++
Sbjct: 514 LG-KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRG 571
Query: 412 C 412
C
Sbjct: 572 C 572
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 20/330 (6%)
Query: 132 FIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEK 191
++Y L ++CS V + ++ H+ IF+ N I YGKCG + A ++FE+
Sbjct: 62 WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEE 121
Query: 192 MDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL 251
M E+ SW+A+I A A + + + M+R+G RA E++ VL +C + L
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGV-RATETSFAGVLKSCGLILDLRL 180
Query: 252 GRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSI 311
R +H +++ NV ++TS++D+Y K + VF + S S+ V++
Sbjct: 181 LRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLE 240
Query: 312 HGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA-----GLVNEGLQCFKNMQFEHKI 366
G EA+ +F ++LE + P + V+ ACS + G V + ++ + +
Sbjct: 241 MGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVV 300
Query: 367 KPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVH-LNLEIGEIAA 425
+V D L A R + +S +K W S +S + L E A
Sbjct: 301 STSVFDMYVKCDRLESA---RRVFDQTRSKDLKS----WTSAMSGYAMSGLTRE-----A 348
Query: 426 EKLFMLNP-NNPGDYLVLANMYARAHKWND 454
+LF L P N + + Y AH+W++
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDE 378
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 28/252 (11%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCAL----AKWGSMEYACSIFRQIEE-PGSFEYNTM 102
KQ H + + G+ +N++ AL K G+++ A FRQ+ E +N +
Sbjct: 415 KQAHGFIYRHGY------DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 103 IRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGV 162
+ G V+ + P + LL C+ + + G IHG + + G
Sbjct: 469 LTG-VARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGY 527
Query: 163 GDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGD 222
D+ ++ ++ MY KC +A +VF++ + + W++II + L
Sbjct: 528 KIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFML 587
Query: 223 MSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTS--------L 274
+ EG + + T + +L ACI G LG + S ++ S +
Sbjct: 588 LENEGV-KPDHVTFLGILQACIREGHVELG-------FQYFSSMSTKYHISPQVEHYDCM 639
Query: 275 IDMYVKSGCIEK 286
I++Y K GC+ +
Sbjct: 640 IELYCKYGCLHQ 651
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 215/437 (49%), Gaps = 11/437 (2%)
Query: 46 EFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRG 105
E KQ+H+ V+K G+ + +N++ + G + + F + E +N+++
Sbjct: 231 EGKQLHSLVVKSGWNISNIFVANVLVD-YYSACGDLSGSMRSFNAVPEKDVISWNSIVSV 289
Query: 106 NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFL--LKACSLLGGVKEGIQIHGHVFKAGVG 163
+ G P I PF+ L CS ++ G QIH +V K G
Sbjct: 290 CADYGSVLDSLDLFSKMQFWGKRPS--IRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFD 347
Query: 164 -DDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGD 222
+ VQ+ LI MYGKC I+++ +++ + ++ ++++ + + + + G
Sbjct: 348 VSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGL 407
Query: 223 MSREGHWRAEESTLVSVLSACIHLGSP-NLGRC--IHGILLRNISELNVVVKTSLIDMYV 279
M EG +E TL +VL A + L P +L C +H +++ +V V SLID Y
Sbjct: 408 MIDEGTG-IDEVTLSTVLKA-LSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYT 465
Query: 280 KSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVG 339
KSG E VF + + F T +I+G + +G G + +++ E+ L PD+V +
Sbjct: 466 KSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILS 525
Query: 340 VLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK 399
VLS CSH+GLV EG F +++ ++ I P + Y CMVDLLGRAG++ +A L+
Sbjct: 526 VLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGD 585
Query: 400 PNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIR 459
+ V W SLL +C++H N IG AAE L L P N Y+ ++ Y + +IR
Sbjct: 586 ADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIR 645
Query: 460 REMADKHLVQTPGFSMV 476
A + L++ G+S V
Sbjct: 646 EIAASRELMREIGYSSV 662
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 192/467 (41%), Gaps = 58/467 (12%)
Query: 49 QVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVS 108
QVH V+ LGF C+ F S LV A + ++ A +F ++ + N ++R
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRL--VDVALKLFDEMLDRNLAVCNLLLRCFCQ 190
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG-DDIF 167
G+ + Y ++++ CS V EG Q+H V K+G +IF
Sbjct: 191 TGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIF 250
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
V N L+ Y CG + + F + EK V SW++I+ CA+ + L L S+
Sbjct: 251 VANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVS--VCAD-YGSVLDSLDLFSKMQ 307
Query: 228 HW--RAEESTLVSVLSACIHLGSPNLGRCIHGILLR---NISELNVVVKTSLIDMYVKSG 282
W R +S L+ C G+ IH +L+ ++S L+ V+++LIDMY K
Sbjct: 308 FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH--VQSALIDMYGKCN 365
Query: 283 CIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLS 342
IE ++Q++ + +++ L G + +++F +++EG D+V VL
Sbjct: 366 GIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLK 425
Query: 343 ACS-------------HAGLVNEG------LQC-------------FKNMQFEHKIKPTV 370
A S H + G + C F+ P +
Sbjct: 426 ALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNI 485
Query: 371 QHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSACKVHLNLEIGEIAAEK 427
+++ R GM + +++ M + P++V S+LS C +E GE+ +
Sbjct: 486 FCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDS 545
Query: 428 LFMLNPNNPGD--YLVLANMYARAHKWNDVARIRREMADKHLVQTPG 472
L +PG Y + ++ RA E A++ L+Q G
Sbjct: 546 LESKYGISPGRKLYACMVDLLGRAGLV--------EKAERLLLQARG 584
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 144/338 (42%), Gaps = 30/338 (8%)
Query: 75 LAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIY 134
L K G++ A F ++ YN +I GN G+ +
Sbjct: 56 LIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTF 115
Query: 135 PFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDE 194
P +L CS +EGIQ+H V G G ++FV++ L+ +Y + A +F++M +
Sbjct: 116 PSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLD 175
Query: 195 KSVASWSAIIGAHACAEMWHQCLMLLGDMSR--EGHWRAEES-------TLVSVLSACIH 245
+++A + ++ +C G+ R E + R E T ++ C H
Sbjct: 176 RNLAVCNLLL----------RCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 246 LGSPNLGRCIHGILLR---NISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSY 302
G+ +H ++++ NIS N+ V L+D Y G + + F + EK S+
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNIS--NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISW 283
Query: 303 TVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ--CFK-N 359
++S + +G ++L +FS++ G P ++ L+ CS + G Q C+
Sbjct: 284 NSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLK 343
Query: 360 MQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP 397
M F+ ++ ++D+ G+ + + L +S+P
Sbjct: 344 MGFD---VSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 186/403 (46%), Gaps = 50/403 (12%)
Query: 48 KQVHAHVLKLGFFCDSFCGSNLVATCAL----AKWGSMEYACSIFRQIEEPGSFEYNTMI 103
+Q+H ++K G C + +V AL AK G++E + F I + +N ++
Sbjct: 336 RQIHGMLIKNG------CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALL 389
Query: 104 RGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVG 163
G + + G P + + LK+C V E Q+H + + G
Sbjct: 390 SGYAN-KDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYE 444
Query: 164 DDIFVQNGLISMYGKC--------------------------------GAIKHACDVFEK 191
D+ +V + L+ Y K G + +
Sbjct: 445 DNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIST 504
Query: 192 MDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL 251
+++ SW+ I A + ++ + + L M + + R ++ T VS+LS C L L
Sbjct: 505 LEQPDTVSWNIAIAACSRSDYHEEVIELFKHM-LQSNIRPDKYTFVSILSLCSKLCDLTL 563
Query: 252 GRCIHGILLR-NISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLS 310
G IHG++ + + S + V LIDMY K G I + VF+ EK+ ++T +IS L
Sbjct: 564 GSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLG 623
Query: 311 IHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTV 370
IHG+G EAL+ F E L G PD V ++ +L+AC H G+V EG+ F+ M+ ++ ++P +
Sbjct: 624 IHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEM 682
Query: 371 QHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACK 413
HY C VDLL R G L+EA LI+ MP + VWR+ L C
Sbjct: 683 DHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 168/394 (42%), Gaps = 37/394 (9%)
Query: 49 QVHAHVLKLGFF-CDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIR--G 105
Q+H LK G F D+F G+ L+ C + +E A +F + +N M+ G
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLL--CLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 106 NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDD 165
+ + + +F+ +LK S + + Q+H K G+ +
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLG--VLKGVSCVKDLDISKQLHCSATKKGLDCE 249
Query: 166 IFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSR 225
I V N LIS YGKCG A +F+ + SW+AII A A +E + L L M
Sbjct: 250 ISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPE 309
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
G + + T VSVL + + GR IHG+L++N E +V+ +LID Y K G +E
Sbjct: 310 HG-FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 286 KGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS 345
F + +K+ + ++SG + + G L +F ++L+ G P + + L +C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC 427
Query: 346 -------HAGLVNEG-----------LQCFKNMQFEHKI--------KPT-VQHYGCMVD 378
H+ +V G ++ + Q + PT V +
Sbjct: 428 VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 379 LLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSAC 412
+ R G E+ LI ++ +P+ V W ++AC
Sbjct: 488 IYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 141/336 (41%), Gaps = 6/336 (1%)
Query: 77 KWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPF 136
K G + A +F Q+ E +NT+I+G + G P+
Sbjct: 61 KLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSG 120
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGV-GDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK 195
LL SL V+ G Q+HG K G+ D FV L+ +YG+ ++ A VFE M K
Sbjct: 121 LLSCASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
Query: 196 SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCI 255
S+ +W+ ++ +C+ ++ R G ES+ + VL + ++ + +
Sbjct: 179 SLETWNHMMSLLGHRGFLKECMFFFRELVRMGA-SLTESSFLGVLKGVSCVKDLDISKQL 237
Query: 256 HGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHG 315
H + + + V SLI Y K G +FQ+ S+ +I + +
Sbjct: 238 HCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENP 297
Query: 316 AEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGC 375
+AL++F + E G +P+ YV VL S L++ G Q M ++ + +
Sbjct: 298 LKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQ-IHGMLIKNGCETGIVLGNA 356
Query: 376 MVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
++D + G L ++ + K N V W +LLS
Sbjct: 357 LIDFYAKCGNLEDSRLCFDYIRDK-NIVCWNALLSG 391
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 167/421 (39%), Gaps = 48/421 (11%)
Query: 42 KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNT 101
K ++ KQ+H K G C+ ++L++ A K G+ A +F+ +N
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLIS--AYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 102 MIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAG 161
+I N G P+ Y +L SL+ + G QIHG + K G
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 162 VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLG 221
I + N LI Y KCG ++ + F+ + +K++ W+A++ +A + CL L
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFL 405
Query: 222 DMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKS 281
M + G +R E T + L +C L H +++R E N V +SL+ Y K+
Sbjct: 406 QMLQMG-FRPTEYTFSTALKSCCVTELQQL----HSVIVRMGYEDNDYVLSSLMRSYAKN 460
Query: 282 --------------------------------GCIEKGVCVFQNMAEKSRFSYTVMISGL 309
G + V + + + S+ + I+
Sbjct: 461 QLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAAC 520
Query: 310 SIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPT 369
S + E +++F +L+ + PD +V +LS CS L + L +
Sbjct: 521 SRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSK--LCDLTLGSSIHGLITKTDFSC 578
Query: 370 VQHYGC--MVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEK 427
+ C ++D+ G+ G +R + + K N + W +L+S +H G+ A EK
Sbjct: 579 ADTFVCNVLIDMYGKCGSIRSVMKVFEETREK-NLITWTALISCLGIH---GYGQEALEK 634
Query: 428 L 428
Sbjct: 635 F 635
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 166 IFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSR 225
++V N +IS+Y K G + A VF++M E++ S++ II ++ + + +M
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLR-NISELNVVVKTSLIDMYVKSGCI 284
G+ + + VS L +C L G +HG+ L+ + + V T L+ +Y + +
Sbjct: 109 FGYLPNQST--VSGLLSCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLL 165
Query: 285 EKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC 344
E VF++M KS ++ M+S L G E + F E++ G + + ++GVL
Sbjct: 166 EMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVL--- 222
Query: 345 SHAGLVNEGLQCFKNMQFEHKIKPTVQHYG--CMVDLLGRAGMLREAYG 391
+G+ C K++ ++ + G C + ++ L AYG
Sbjct: 223 -------KGVSCVKDLDISKQLHCSATKKGLDCEISVVNS---LISAYG 261
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 236 LVSVLSACIHLGSPNLGRCIHGILLRNISEL--NVVVKTSLIDMYVKSGCIEKGVCVFQN 293
+VS+L+ C S + +H + + S L V V ++I +Y K G + VF
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 294 MAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS---HAGLV 350
M E+++ S+ +I G S +G +A VFSE+ G P+ G+LS S AG
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQ 134
Query: 351 NEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLS 410
GL + T C++ L GR +L A + + MP K + W ++S
Sbjct: 135 LHGLSLKYGLFMADAFVGT-----CLLCLYGRLDLLEMAEQVFEDMPFKSLE-TWNHMMS 188
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 194/405 (47%), Gaps = 41/405 (10%)
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL---GRCIHGILLRNISELNVV 269
W + + +L + +G+ L+ +L G P R +H ++ +S +V
Sbjct: 100 WREAVEVLDYLENKGY----AMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVG 155
Query: 270 VKTSLIDMYVKSGC--IEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILE 327
+ ++I+MY SGC ++ + VF+ M E + + VM+ +G+G EA+ +F+ E
Sbjct: 156 ARNAIIEMY--SGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKE 213
Query: 328 EGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLR 387
EG P+ ++ V S C+ G V EG F+ M E+ I P+++HY + +L +G L
Sbjct: 214 EGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLD 273
Query: 388 EAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYA 447
EA ++ MP++P+ VW +L++ +VH ++E+G+ AE + L
Sbjct: 274 EALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKL---------------- 317
Query: 448 RAHKWNDVARIRREMADKHLVQTPGFSMVEAERKVYK-------FVSQDRSQPEFDTIYN 500
D R+ + ++ LV T V+ E F D S P+ + IY
Sbjct: 318 ------DATRLDK-VSSAGLVATKASDFVKKEPSTRSEPYFYSTFRPVDSSHPQMNIIYE 370
Query: 501 MIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLIHTSEGSPMRISR 560
+ + QL+ GY PDT + E +E++ + +++A+ +L+ + S + +
Sbjct: 371 TLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLT 430
Query: 561 NLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
N+R+ DCH K +S I R++ RD +H FK+G C C + W
Sbjct: 431 NIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 184/390 (47%), Gaps = 18/390 (4%)
Query: 28 RF-NEQGWYPLLKRCKSMEEF---KQVHAHVLKLGFFCDSFCGSNLVATCAL----AKWG 79
RF NE+ + LL C EF +QVH +++K+G NL+ +L A+ G
Sbjct: 180 RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-------GNLIVESSLVYFYAQCG 232
Query: 80 SMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLK 139
+ A F +EE + +I + P+ F +LK
Sbjct: 233 ELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILK 292
Query: 140 ACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVAS 199
ACS ++ G Q+H V K + D+FV L+ MY KCG I VF+ M ++ +
Sbjct: 293 ACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVT 352
Query: 200 WSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL 259
W++II AHA + + L M R H A T+VS+L AC +G+ LG+ +H +
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRR-HLIANNLTVVSILRACGSVGALLLGKELHAQI 411
Query: 260 LRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEAL 319
++N E NV + ++L+ +Y K G V Q + + S+T MISG S GH +EAL
Sbjct: 412 IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEAL 471
Query: 320 QVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDL 379
E+++EG+ P+ Y L AC+++ + G + H + V ++ +
Sbjct: 472 DFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHM 530
Query: 380 LGRAGMLREAYGLIKSMPIKPNDVVWRSLL 409
+ G + EA+ + SMP K N V W++++
Sbjct: 531 YAKCGFVSEAFRVFDSMPEK-NLVSWKAMI 559
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 30 NEQGWYPLLKRC---KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACS 86
NE +LK C K++ +QVH+ V+K D F G++L+ AK G +
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDM--YAKCGEISDCRK 340
Query: 87 IFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGG 146
+F + + + ++I + + +N +L+AC +G
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGA 400
Query: 147 VKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGA 206
+ G ++H + K + ++++ + L+ +Y KCG + A +V +++ + V SW+A+I
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG 460
Query: 207 HACAEMWHQ--CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS 264
C+ + H+ L L +M +EG T S L AC + S +GR IH I +N +
Sbjct: 461 --CSSLGHESEALDFLKEMIQEG-VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHA 517
Query: 265 ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSE 324
NV V ++LI MY K G + + VF +M EK+ S+ MI G + +G EAL++
Sbjct: 518 LSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYR 577
Query: 325 ILEEGLAPDDVVYVGVLSAC 344
+ EG DD ++ +LS C
Sbjct: 578 MEAEGFEVDDYIFATILSTC 597
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 3/278 (1%)
Query: 134 YPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD 193
Y L + G++ +IH K I+ N LIS + G + +A VF+ M
Sbjct: 85 YALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMP 144
Query: 194 EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGR 253
EK+ +W+A+I + + + L D + G E V +L+ C LGR
Sbjct: 145 EKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGR 204
Query: 254 CIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHG 313
+HG +++ + N++V++SL+ Y + G + + F M EK S+T +IS S G
Sbjct: 205 QVHGNMVK-VGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKG 263
Query: 314 HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHY 373
HG +A+ +F +L P++ +L ACS + G Q ++ + IK V
Sbjct: 264 HGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQV-HSLVVKRMIKTDVFVG 322
Query: 374 GCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
++D+ + G + + + M + N V W S+++A
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNR-NTVTWTSIIAA 359
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 195/373 (52%), Gaps = 21/373 (5%)
Query: 236 LVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGC--IEKGVCVFQN 293
L+ + C + + R +H I+ L+ ++I+MY SGC + + VF
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDC----ITPLDARSYHTVIEMY--SGCRSTDDALNVFNE 168
Query: 294 MAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEG 353
M +++ ++ MI L+ +G G A+ +F+ +EEG PD ++ V AC G +NEG
Sbjct: 169 MPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG 228
Query: 354 LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACK 413
L F++M ++ + +++ Y ++++L G L EA ++ M ++P+ +W +L++ C
Sbjct: 229 LLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCW 288
Query: 414 VHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIR-REMADKHLVQTPG 472
V LE+G+ AE + L+ + +N A K +D A + +E+ +++
Sbjct: 289 VQGYLELGDRFAELIKKLDASRMSKE---SNAGLVAAKASDSAMEKLKELRYCQMIRD-- 343
Query: 473 FSMVEAERKVYKFVSQDRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRE 532
+ ++++++F + D S T+ + ++ Q+ G+ P T + V+E+EK E
Sbjct: 344 ----DPKKRMHEFRAGDTSH--LGTV-SAFRSLKVQMLDIGFVPATRVCFVTVEEEEKEE 396
Query: 533 RLKHHSQKLAIAFTLIHTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFH 592
+L S KLA A +I++ P+ + +N+R C D H K IS I R + RD+ ++H
Sbjct: 397 QLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYH 456
Query: 593 HFKDGACSCKDYW 605
+K+G CSCKDYW
Sbjct: 457 FYKNGVCSCKDYW 469
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 152/343 (44%), Gaps = 38/343 (11%)
Query: 70 VATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
V AK +E A F ++ E +N M+ G G+ P
Sbjct: 203 VMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRP 262
Query: 130 DNFIYPFLLKACS----------LLGGVKE---------------------GIQIHGHVF 158
+ + ++ ACS L+ + E IQ +F
Sbjct: 263 NETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIF 322
Query: 159 -KAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCL 217
+ G ++ N +IS Y + G + A +F+ M +++V SW+++I +A +
Sbjct: 323 NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAI 382
Query: 218 MLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDM 277
DM G + +E T++SVLSAC H+ LG CI + +N +LN SLI M
Sbjct: 383 EFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFM 442
Query: 278 YVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
Y + G + + VF M E+ SY + + + +G G E L + S++ +EG+ PD V Y
Sbjct: 443 YARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTY 502
Query: 338 VGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLL 380
VL+AC+ AGL+ EG + FK+++ P HY CM DLL
Sbjct: 503 TSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 165/395 (41%), Gaps = 79/395 (20%)
Query: 51 HAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIM 110
A V KLGFF D + + V K S+E A +F QI + ++N MI G
Sbjct: 124 QALVEKLGFFKDPYVRN--VIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWG 181
Query: 111 NXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQN 170
N +AC L + E +D+
Sbjct: 182 NKE-------------------------EACKLFDMMPE--------------NDVVSWT 202
Query: 171 GLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWR 230
+I+ + K +++A F++M EKSV SW+A++ +A L L DM R G R
Sbjct: 203 VMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGV-R 261
Query: 231 AEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDM------------- 277
E+T V V+SAC P+L R + ++ LN VKT+L+DM
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 278 -------------------YVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEA 318
Y + G + +F M +++ S+ +I+G + +G A A
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 319 LQVFSEILEEGLA-PDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMV 377
++ F ++++ G + PD+V + VLSAC H + G C + +++IK Y ++
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG-DCIVDYIRKNQIKLNDSGYRSLI 440
Query: 378 DLLGRAGMLREAYGLIKSMPIKPNDVV-WRSLLSA 411
+ R G L EA + M K DVV + +L +A
Sbjct: 441 FMYARGGNLWEAKRVFDEM--KERDVVSYNTLFTA 473
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 170/365 (46%), Gaps = 18/365 (4%)
Query: 36 PLLKRCKSMEEFKQVHAHVLKLGFFCDS-FCGSNLVATCALAKWGSMEYACSIFRQIEEP 94
P+L K+++ K+VHAHVLK + + F S L+ K G M +F ++
Sbjct: 324 PVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDL--YCKCGDMASGRRVFYGSKQR 381
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIH 154
+ + ++ G + G PD +L C+ L +K+G +IH
Sbjct: 382 NAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIH 441
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAH------- 207
+ K ++ + L+ MY KCG ++ +F+++++++V +W+A+I +
Sbjct: 442 CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLR 501
Query: 208 ACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELN 267
A E++ LMLL R + T+ VL+ C L + LG+ +HG +L+ E
Sbjct: 502 AGIEVFR--LMLLSKH------RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESI 553
Query: 268 VVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILE 327
V +I MY K G + F +A K ++T +I + +A+ F +++
Sbjct: 554 PFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVS 613
Query: 328 EGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLR 387
G P+ + VLS CS AG V+E + F M + ++P+ +HY +++LL R G +
Sbjct: 614 RGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVE 673
Query: 388 EAYGL 392
EA L
Sbjct: 674 EAQRL 678
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 183/415 (44%), Gaps = 15/415 (3%)
Query: 30 NEQGWYPLLKRC---KSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACS 86
N + LL+ C KS+ KQVH H+ G + F + LV GS++ A
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHM--YTACGSVKDAQK 167
Query: 87 IFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPF--LLKACSLL 144
+F + + +N ++RG V +G D +Y + K+ +
Sbjct: 168 VFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGA 227
Query: 145 GGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAII 204
+++G++ H K G+ + +F++ L+ MY KCG + A VF+++ E+ + W A+I
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 205 GAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS 264
A + + L L M E L ++L + + LG+ +H +L++ +
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 265 EL-NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFS 323
+ V + LID+Y K G + G VF +++ S+T ++SG + +G +AL+
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEG--LQCFKNMQFEHKIKPTVQHYGCMVDLLG 381
+ +EG PD V VL C+ + +G + C+ ++ P V ++ +
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCY---ALKNLFLPNVSLVTSLMVMYS 464
Query: 382 RAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNP 436
+ G+ L + + N W +++ + +L G I +L +L+ + P
Sbjct: 465 KCGVPEYPIRLFDRLEQR-NVKAWTAMIDCYVENCDLRAG-IEVFRLMLLSKHRP 517
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 137/293 (46%), Gaps = 13/293 (4%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
GI + + LL+AC + G Q+H H+ G+ + F++ L+ MY CG++K A
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165
Query: 186 CDVFEKMDEKSVASWSAII-GAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI 244
VF++ +V SW+A++ G + +Q ++ RE +L +V +
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFA 225
Query: 245 HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
+ G H + ++N +V +KTSL+DMY K G + VF + E+ +
Sbjct: 226 GASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGA 285
Query: 305 MISGLSIHGHGAEALQVFSEIL-EEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKN-MQF 362
MI+GL+ + EAL +F ++ EE + P+ V+ +L + G + + ++
Sbjct: 286 MIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 363 EHKIKPTVQHYGCMVDLLGRAGML----REAYGLIKSMPIKPNDVVWRSLLSA 411
++ ++ H G ++DL + G + R YG + N + W +L+S
Sbjct: 346 KNYVEQPFVHSG-LIDLYCKCGDMASGRRVFYG-----SKQRNAISWTALMSG 392
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 202/439 (46%), Gaps = 51/439 (11%)
Query: 50 VHAHVLKLGFFCDSFCGSNLVATCAL---AKWGSMEYACSIFRQIEEPGSFEYNTMIRGN 106
+H+ ++KLG G+ +V C + K G M+ A +F+ +EE + +N ++
Sbjct: 178 IHSKLVKLGLEK----GNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV--- 230
Query: 107 VSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDI 166
+CS G ++ G+ F D
Sbjct: 231 --------------------------------ASCSRNGKLELGLWF----FHQMPNPDT 254
Query: 167 FVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSRE 226
N LI + K G +A V M + +SW+ I+ + +E + M
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS 314
Query: 227 GHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEK 286
G R +E +L VL+A L G IH + + VVV ++LIDMY K G ++
Sbjct: 315 GV-RFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKH 373
Query: 287 GVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEG-LAPDDVVYVGVLSACS 345
+F M K+ + MISG + +G EA+++F+++ +E L PD ++ +L+ CS
Sbjct: 374 AELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
Query: 346 HAGLVNE-GLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVV 404
H + E L F+ M E++IKP+V+H ++ +G+ G + +A +I+ + V
Sbjct: 434 HCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVA 493
Query: 405 WRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYL--VLANMYARAHKWNDVARIRREM 462
WR+LL AC +L+ + A K+ L + +YL V++N+YA +W +V +IR+ M
Sbjct: 494 WRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIM 553
Query: 463 ADKHLVQTPGFSMVEAERK 481
+ +++ G S +++ K
Sbjct: 554 RESGVLKEVGSSWIDSRTK 572
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 6/236 (2%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G PD LL+ G V Q+HG+V K G + + N L+ Y +++ A
Sbjct: 50 GEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDA 109
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
VF++M + V SW++++ + + + + + L ++ R + E + + L+AC
Sbjct: 110 HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF-PNEFSFTAALAACAR 168
Query: 246 LGSPNLGRCIHGILLR-NISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTV 304
L LG CIH L++ + + NVVV LIDMY K G ++ V VFQ+M EK S+
Sbjct: 169 LHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNA 228
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM 360
+++ S +G L F ++ PD V Y ++ A +G N Q +M
Sbjct: 229 IVASCSRNGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 154/408 (37%), Gaps = 81/408 (19%)
Query: 20 PQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWG 79
P S L G Y + C+ Q+H +V K GF ++ ++L+ +
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCR------QLHGYVTKHGFVSNTRLSNSLMRFYKTSD-- 104
Query: 80 SMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLK 139
S+E A +F ++ +P +N+++ G V + P+ F + L
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 140 ACSLLGGVKEGIQIHGHVFKAGV-GDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVA 198
AC+ L G IH + K G+ ++ V N LI MYGKCG + A VF+ M+EK
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV 224
Query: 199 SWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGI 258
SW+AI+ ++C G LG
Sbjct: 225 SWNAIV------------------------------------ASCSRNGKLELGLW---- 244
Query: 259 LLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEA 318
+ + V LID +VKSG V +M + S+ +++G EA
Sbjct: 245 FFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEA 304
Query: 319 LQVFSEILEEGLAPDDVV---------------YVGVLSACSHAGLVNEGLQCFKNMQFE 363
+ F+++ G+ D+ + ++ AC+H +
Sbjct: 305 TEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAH----------------K 348
Query: 364 HKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+ V ++D+ + GML+ A + +MP K N +VW ++S
Sbjct: 349 LGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRK-NLIVWNEMISG 395
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 37/285 (12%)
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRA-----------EESTLVSVLSACIHLGSPNLG 252
+G+ A + W + L G RA + S LV +L + G +L
Sbjct: 15 VGSTASSNSWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLC 74
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVMISGLSIH 312
R +HG + ++ N + SL+ Y S +E VF M + S+ ++SG
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 313 GHGAEALQVFSEILEEGLAPDDVVYVGVLSACS-----------HAGLVNEGLQCFKNMQ 361
G E + +F E+ + P++ + L+AC+ H+ LV GL+
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLE------ 188
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHLNLEIG 421
K V C++D+ G+ G + +A + + M K + V W +++++C + LE+G
Sbjct: 189 -----KGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEK-DTVSWNAIVASCSRNGKLELG 242
Query: 422 EIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKH 466
+ M NP+ Y L + + ++ +N+ ++ +M + +
Sbjct: 243 LWFFHQ--MPNPDTV-TYNELIDAFVKSGDFNNAFQVLSDMPNPN 284
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 78/117 (66%), Gaps = 5/117 (4%)
Query: 489 DRSQPEFDTIYNMIHQMEWQLEFEGYKPDTSQVLLDVDEDEKRERLKHHSQKLAIAFTLI 548
DRS+ Y + + ++ GY P+T VL D+DE+ K + L HHS++LAIAF +I
Sbjct: 128 DRSKA-----YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGII 182
Query: 549 HTSEGSPMRISRNLRLCSDCHTYTKFISKICEREITVRDRFRFHHFKDGACSCKDYW 605
+T G+ +R+ +NLR+C DCH + K +S I +REI VRD RFHHF+DG CSC DYW
Sbjct: 183 NTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 150/351 (42%), Gaps = 17/351 (4%)
Query: 76 AKWGSMEYACSIFRQIEEPGSFE----YNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDN 131
K G + A + R ++E G Y+ MI G V + + G+ PD
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 132 FIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEK 191
+Y ++ A +G + IQ + K +I Y K G ++ + +VF+
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 192 MDE----KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLG 247
M +V +++ +I + + +L +M+ G A E T ++ +G
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG-VSANEHTYTKIMQGYASVG 673
Query: 248 SPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKS----RFSYT 303
L ++++ +L+ KSG ++ + V + M+ ++ F Y
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Query: 304 VMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE 363
++I G + G EA + ++ +EG+ PD Y +SACS AG +N Q + M+
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME-A 792
Query: 364 HKIKPTVQHYGCMVDLLGRAGMLREA---YGLIKSMPIKPNDVVWRSLLSA 411
+KP ++ Y ++ RA + +A Y +K+M IKP+ V+ LL++
Sbjct: 793 LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 162/398 (40%), Gaps = 38/398 (9%)
Query: 28 RFNEQG-----WYPLLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSME 82
R NEQG L R + K++ G+ + S L++ A + G E
Sbjct: 228 RKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALIS--AYGRSGLHE 285
Query: 83 YACSIFRQIEE----PGSFEYNTMIRG-NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFL 137
A S+F ++E P YN +I M G+ PD + L
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 138 LKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK-- 195
L CS G + + + + D+F N L+ K G + A ++ +M K
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 196 --SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW--RAEESTLVSVLSACIHLGSPNL 251
+V S+S +I A A + + L L G+M G R +TL+S+ + +
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT--------KV 457
Query: 252 GRCIHGI-LLRNISEL----NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSY 302
GR + +LR ++ + +VV +L+ Y K G ++ VF M + + +Y
Sbjct: 458 GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTY 517
Query: 303 TVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQF 362
+ +I G S G EA+++F E GL D V+Y ++ A GLV + M
Sbjct: 518 STLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577
Query: 363 EHKIKPTVQHYGCMVDLLGR-AGMLREA-YGLIKSMPI 398
E I P V Y ++D GR A M R A Y S+P
Sbjct: 578 E-GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPF 614
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 14/277 (5%)
Query: 145 GGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDE----KSVASW 200
G V +I F G G+ ++ + LIS YG+ G + A VF M E ++ ++
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 201 SAIIGAHACAEM-WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGIL 259
+A+I A M + Q +M R G + + T S+L+ C G R + +
Sbjct: 307 NAVIDACGKGGMEFKQVAKFFDEMQRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFDEM 365
Query: 260 LRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTVMISGLSIHGHG 315
E +V +L+D K G ++ + M K + SY+ +I G + G
Sbjct: 366 TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRF 425
Query: 316 AEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGC 375
EAL +F E+ G+A D V Y +LS + G E L + M IK V Y
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA-SVGIKKDVVTYNA 484
Query: 376 MVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLL 409
++ G+ G E + M + PN + + +L+
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 15/297 (5%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
PD Y L+ A G + + + + +A + N LI+ G G + A +V
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 189 FEKMDEKSVA----SWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI 244
+KM + V + + ++ A+ + + L ++ + R + +T ++
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF-ELMKGAKVRPDTTTFNIIIYCLS 294
Query: 245 HLGSPNLGRCIHGILLRNISEL--NVVVKTSLIDMYVKSGCIEKGVCVFQNMA----EKS 298
LG + + + +E +VV TS++ +Y G IE VF+ M + +
Sbjct: 295 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 354
Query: 299 RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFK 358
SY ++ ++HG AL V +I + G+ PD V Y +L++ + + + F
Sbjct: 355 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL 414
Query: 359 NMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSAC 412
M+ E + KP V Y ++D G G L EA + + M IKPN V +LL+AC
Sbjct: 415 MMRKERR-KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 21/270 (7%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ P+ Y L+ A ++ G + + G + + G+ D+ L++ YG+ A
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 186 CDVFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+VF M ++ +V +++A+I A+ + + + M ++G + ++ ++L+
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI-KPNVVSVCTLLA 468
Query: 242 ACIHLGSP-NLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK--- 297
AC N+ + R I+ LN S I Y+ + +EK + ++Q+M +K
Sbjct: 469 ACSRSKKKVNVDTVLSAAQSRGIN-LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 298 -SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
++T++ISG EA+ E+ + + VY VL A S G V E
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 587
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGML 386
F M+ GC D++ ML
Sbjct: 588 FNQMKMA----------GCEPDVIAYTSML 607
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 112/281 (39%), Gaps = 12/281 (4%)
Query: 77 KWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPF 136
+W +M + R P YN +I S N G+GPD +
Sbjct: 195 RW-AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNI 253
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK- 195
+L A + + + A V D N +I K G A D+F M EK
Sbjct: 254 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 313
Query: 196 -----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPN 250
V ++++I+ ++ C + M EG + + +++ A G
Sbjct: 314 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG-LKPNIVSYNALMGAYAVHGMSG 372
Query: 251 LGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR----FSYTVMI 306
+ G + +N +VV T L++ Y +S K VF M ++ R +Y +I
Sbjct: 373 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432
Query: 307 SGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
+G AEA+++F ++ ++G+ P+ V +L+ACS +
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 15/297 (5%)
Query: 129 PDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDV 188
PD Y L+ A G + + + + +A + N LI+ G G + A +V
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 189 FEKMDEKSVA----SWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI 244
+KM + V + + ++ A+ + + L ++ + R + +T ++
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF-ELMKGAKVRPDTTTFNIIIYCLS 162
Query: 245 HLGSPNLGRCIHGILLRNISEL--NVVVKTSLIDMYVKSGCIEKGVCVFQNMA----EKS 298
LG + + + +E +VV TS++ +Y G IE VF+ M + +
Sbjct: 163 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 222
Query: 299 RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFK 358
SY ++ ++HG AL V +I + G+ PD V Y +L++ + + + F
Sbjct: 223 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL 282
Query: 359 NMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSAC 412
M+ E + KP V Y ++D G G L EA + + M IKPN V +LL+AC
Sbjct: 283 MMRKERR-KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 21/270 (7%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ P+ Y L+ A ++ G + + G + + G+ D+ L++ YG+ A
Sbjct: 218 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 277
Query: 186 CDVFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+VF M ++ +V +++A+I A+ + + + M ++G + ++ ++L+
Sbjct: 278 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-IKPNVVSVCTLLA 336
Query: 242 ACIHLGSP-NLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK--- 297
AC N+ + R I+ LN S I Y+ + +EK + ++Q+M +K
Sbjct: 337 ACSRSKKKVNVDTVLSAAQSRGIN-LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 298 -SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
++T++ISG EA+ E+ + + VY VL A S G V E
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGML 386
F M+ GC D++ ML
Sbjct: 456 FNQMKMA----------GCEPDVIAYTSML 475
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 112/281 (39%), Gaps = 12/281 (4%)
Query: 77 KWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPF 136
+W +M + R P YN +I S N G+GPD +
Sbjct: 63 RW-AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNI 121
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK- 195
+L A + + + A V D N +I K G A D+F M EK
Sbjct: 122 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Query: 196 -----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPN 250
V ++++I+ ++ C + M EG + + +++ A G
Sbjct: 182 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG-LKPNIVSYNALMGAYAVHGMSG 240
Query: 251 LGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR----FSYTVMI 306
+ G + +N +VV T L++ Y +S K VF M ++ R +Y +I
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 307 SGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
+G AEA+++F ++ ++G+ P+ V +L+ACS +
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 141/312 (45%), Gaps = 12/312 (3%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
GIG D + Y ++ + + G + K G D+ + LI+ + + + A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 186 CDVFEKMDE----KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
D+ KM+E V ++ II + + + L M R+G RA+ T S+++
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG-VRADAVTYNSLVA 217
Query: 242 A-CIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK--- 297
C + R + +++R+I NV+ T++ID++VK G + + +++ M +
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVP-NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 298 -SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
F+Y +I+GL +HG EA Q+ ++ +G PD V Y +++ + V+EG +
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSACKVHL 416
F+ M + T+ Y ++ +AG A + M +PN + LL ++
Sbjct: 337 FREMAQRGLVGDTIT-YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNW 395
Query: 417 NLEIGEIAAEKL 428
+E + E +
Sbjct: 396 RVEKALVLFENM 407
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 155/355 (43%), Gaps = 31/355 (8%)
Query: 137 LLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD--- 193
L+K+ LG V+E + + + + G+ ++ N L++ + A VFE M+
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 194 -EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
+ + +++ +I + A + + L DM GH A++ T ++++ AC + G
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGH-EADKITYMTMIQAC--YADSDFG 309
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYV----KSGCIEKGVCVFQNMAEKSRFS----YTV 304
C+ L + + E + V + + K G + +G VF+NM K YTV
Sbjct: 310 SCVA--LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
+I G + G +A+++ +++EG PD V Y V++ G V E L F +F+
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 365 KIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK---PNDVVWRSLLSACKVHLNLEIG 421
+ Y ++D LG+AG + EA L + M K + + +L+ A H ++
Sbjct: 428 -LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD-- 484
Query: 422 EIAAEKLFMLNPNNPG------DYLVLANMYARAHKWNDVARIRREMADKHLVQT 470
A LF G Y +L + + H+ + ++ M DK + T
Sbjct: 485 --EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 14/260 (5%)
Query: 165 DIFVQNGLISMYGKCGAIKHACDVFEKMDE----KSVASWSAIIGAHA-CAEMWHQCLML 219
D+ ++ Y + G + A D+FE+M E ++ +++ I+ W + L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 220 LGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYV 279
L +M +G + +E T +VLSAC G + L E V +L+ ++
Sbjct: 269 LDEMRSKG-LKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 280 KSGCIEKGVCVFQNMAEKS----RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDV 335
K+G + + V + M E S +Y +++ G EA V + ++G+ P+ +
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 336 VYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI-- 393
Y V+ A AG +E L+ F +M+ E P Y ++ LLG+ E ++
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMK-EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 394 -KSMPIKPNDVVWRSLLSAC 412
KS PN W ++L+ C
Sbjct: 447 MKSNGCSPNRATWNTMLALC 466
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 144/356 (40%), Gaps = 23/356 (6%)
Query: 74 ALAKWGSMEYACSIFRQIEE----PGSFEYNTMIR--GNVSIMNXXXXXXXXXXXXXXGI 127
A K G + A +F ++E P + YN ++ G S N G
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN--GC 452
Query: 128 GPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACD 187
P+ + +L C G K ++ + G D N LIS YG+CG+ A
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 188 VFEKMDEKS----VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSAC 243
++ +M V +++A++ A A W ++ DM +G E S S++ C
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS--YSLMLQC 570
Query: 244 IHLGSPNLG--RCIHGILLRNISELNVVVKTSLIDMYVKSGCI--EKGVCVFQNMAEKSR 299
G LG R + I I ++++T L+ + E+ +F+ K
Sbjct: 571 YAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPD 630
Query: 300 FS-YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFK 358
+ M+S + + +A + I E+GL+PD V Y ++ G + + K
Sbjct: 631 MVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILK 690
Query: 359 NMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSA 411
++ + ++KP + Y ++ R G+++EA ++ M I+P + + +S
Sbjct: 691 TLE-KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 151/430 (35%), Gaps = 60/430 (13%)
Query: 4 TTVLSQTHLLSLPSTPPQCSELSTRFNEQGWYPLL-----------KRCKSMEEFKQVHA 52
TT+L H S + +L R E G P L K +S + V
Sbjct: 214 TTIL---HAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 53 HVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE----EPGSFEYNTMIRGNVS 108
+ G D F S +++ CA + G + A F +++ EPG+ YN +++
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACA--REGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
D+ Y L+ A G KE + + K GV +
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDE----KSVASWSAIIGAHACAEMWHQCLMLLGDMS 224
+I YGK G A +F M E + +++A++ ++ + +L DM
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
G +T ++L+ C + G +D +V
Sbjct: 449 SNG-CSPNRATWNTMLALCGNKG---------------------------MDKFVNRVFR 480
Query: 285 EKGVCVFQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSAC 344
E C F E R ++ +IS G +A +++ E+ G Y +L+A
Sbjct: 481 EMKSCGF----EPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 345 SHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGM---LREAYGLIKSMPIKPN 401
+ G G +M+ KPT Y M+ + G + IK I P+
Sbjct: 537 ARKGDWRSGENVISDMK-SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Query: 402 DVVWRSLLSA 411
++ R+LL A
Sbjct: 596 WMLLRTLLLA 605
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 188/462 (40%), Gaps = 51/462 (11%)
Query: 50 VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYAC--SIFRQIEEPGSFEYNTMIRGNV 107
V ++KLG+ D S+L+ K S A +F +P + +NT+I G
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 108 SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIF 167
G PD F Y ++ G + + + + K + D+
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDM 223
+ +I + A ++F +MD K +V +++++I W LL DM
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 224 SREGHWRAEESTLVSVLSACIHLG-----------------SPNL--------GRCIHGI 258
E T +++ A + G P++ G C+H
Sbjct: 317 I-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 259 L--LRNISEL--------NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTV 304
L +++ EL NVV +LI + K+ +E+G+ +F+ M+++ + +Y
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
+I GL G A ++F +++ +G+ PD + Y +L G + + L F+ +Q +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ-KS 494
Query: 365 KIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSA-CKVHLNLEI 420
K++P + Y M++ + +AG + + + L S+ +KPN +++ +++S C+ L E
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 421 GEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREM 462
+ E N G Y L R A + +EM
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 154/357 (43%), Gaps = 52/357 (14%)
Query: 70 VATCALAKWGSMEYACSIFRQIE----EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXX 125
V L K G + A ++ ++E EPG YNT+I G +
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
GI P+ Y L+ G + ++ + + + D+F + LI + K G + A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 186 CDVFEKMDEKSV----ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
++++M ++S+ ++S++I C+ H R +E+ +
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGF--------CM----------HDRLDEAKQMFEFM 387
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK---- 297
H C +VV +LI + K +E+G+ VF+ M+++
Sbjct: 388 VSKH--------CFP----------DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 298 SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCF 357
+ +Y ++I GL G A ++F E++ +G+ P+ + Y +L G + + + F
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 358 KNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSA 411
+ +Q K++PT+ Y M++ + +AG + + + L ++ +KP+ V + +++S
Sbjct: 490 EYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 137/335 (40%), Gaps = 14/335 (4%)
Query: 74 ALAKWGSMEYACSIFRQIE----EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
L K+ M+ A ++F+++E P Y+++I + I P
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
D F + L+ A G + E +++ + K + I + LI+ + + A +F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 190 EKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
E M K V +++ +I + + + + +MS+ G T ++
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG-LVGNTVTYNILIQGLFQ 443
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA----EKSRFS 301
G ++ + I ++ + N++ +L+D K+G +EK + VF+ + E + ++
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
Y +MI G+ G + +F + +G+ PD V Y ++S G E FK M+
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM 396
E P Y ++ R G + LIK M
Sbjct: 564 -EDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 134/315 (42%), Gaps = 15/315 (4%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G P+ + L+ L E + + + G D+ +++ K G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 186 CDVFEKMD----EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
++ KM+ E V ++ II + L L +M +G R T S++S
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG-IRPNVVTYSSLIS 299
Query: 242 ACIHLGS-PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR- 299
+ G + R + ++ R I+ +V ++LID +VK G + + ++ M ++S
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINP-DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 300 ---FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
+Y+ +I+G +H EA Q+F ++ + PD V Y ++ V EG++
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAG---MLREAYGLIKSMPIKPNDVVWRSLLSACK 413
F+ M + TV Y ++ L +AG M +E + + S + PN + + +LL
Sbjct: 419 FREMSQRGLVGNTVT-YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 414 VHLNLEIGEIAAEKL 428
+ LE + E L
Sbjct: 478 KNGKLEKAMVVFEYL 492
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/453 (19%), Positives = 172/453 (37%), Gaps = 56/453 (12%)
Query: 67 SNLVATCALAKWGSMEYACSIFRQIEE--------------------------------- 93
+ ++A AK EYA +F+ ++E
Sbjct: 99 AQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVH 158
Query: 94 --------PGSFEYNTMIRGNV-SIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLL 144
PG YN ++ + S N + P+ F Y L++
Sbjct: 159 LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFA 218
Query: 145 GGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD----EKSVASW 200
G + + + + G ++ N LI Y K I + M E ++ S+
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 201 SAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILL 260
+ +I + +L +M+R G + +E T +++ G+ + +H +L
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRG-YSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 261 RNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTVMISGLSIHGHGA 316
R+ +V+ TSLI K+G + + + M + + +YT ++ G S G+
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 317 EALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCM 376
EA +V E+ + G +P V Y +++ G + + + ++M+ E + P V Y +
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK-EKGLSPDVVSYSTV 456
Query: 377 VDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSA-CKVHLNLEIGEIAAEKLFMLN 432
+ R+ + EA + + M IKP+ + + SL+ C+ E ++ E L +
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 433 PNNPGDYLVLANMYARAHKWNDVARIRREMADK 465
P + Y L N Y ++ EM +K
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 130/326 (39%), Gaps = 25/326 (7%)
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
P Y ++I N G+ P+ Y L+ S G + E ++
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK----SVASWSAIIGAHAC 209
+ G + N LI+ + G ++ A V E M EK V S+S ++
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 210 AEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVV 269
+ + L + +M +G + + T S++ ++ +LR +
Sbjct: 463 SYDVDEALRVKREMVEKG-IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 270 VKTSLIDMYVKSGCIEKGVCVFQNMAEKSRF----SYTVMISGLSIHGHGAEALQVFSEI 325
T+LI+ Y G +EK + + M EK +Y+V+I+GL+ EA ++ ++
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 326 LEEGLAPDDVVYVGVLSACSH---------------AGLVNEGLQCFKNMQFEHKIKPTV 370
E P DV Y ++ CS+ G++ E Q F++M ++ KP
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH-KPDG 640
Query: 371 QHYGCMVDLLGRAGMLREAYGLIKSM 396
Y M+ RAG +R+AY L K M
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEM 666
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 13/297 (4%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G P+ + Y L+ LG + E + + G+ + N LIS + K I A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 186 CDVFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
++F +M K V +++++I + L LL DM EG A T ++++
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG-VVANTVTYNTLIN 537
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK---- 297
A + G R + ++ S L+ + SLI ++G ++K +F+ M
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 298 SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCF 357
S S ++I+GL G EA++ E++ G PD V + +++ AG + +GL F
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 358 KNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSA 411
+ +Q E I P + ++ L + G + +A L+ PN W LL +
Sbjct: 658 RKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 156/385 (40%), Gaps = 41/385 (10%)
Query: 60 FCDSFCGSNLVATCALAKWGSMEYACSIFRQIE----EPGSFEYNTMIRGNVSIMNXXXX 115
F D+ S L+++ K G + A +F +++ +P Y T++ +
Sbjct: 230 FPDTITYSALISS--YEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 116 XXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISM 175
G P + Y L+K G V E + + + G+ D+ N L+++
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 176 YGKCGAIKHACDVFEKMD----EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHW-- 229
GK G ++ +VF +M +V S++ +I A ++ +S W
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESK---------AHVSEVSSWFD 398
Query: 230 --RAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELN-------VVVKTSLIDMYVK 280
+A+ + + + G R +LL + E++ SLI+ K
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLL--LEEMDEKGFPPCPAAYCSLINALGK 456
Query: 281 SGCIEKGVCVFQNMAEK----SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVV 336
+ E +F+ + E S Y VMI G +EA+ +F+E+ +G PD
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 337 YVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA---YGLI 393
Y ++S AG++NE + M+ E+ + + + +++ R G+ R A + I
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKME-ENGCRADINSHNIILNGFARTGVPRRAIEMFETI 575
Query: 394 KSMPIKPNDVVWRSLLSACKVHLNL 418
K IKP+ V + +LL C H +
Sbjct: 576 KHSGIKPDGVTYNTLL-GCFAHAGM 599
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 32/319 (10%)
Query: 168 VQNGLISMYGKCGAIKHACDVFEKMDEK----SVASWSAII------GAHACAEMWHQCL 217
V + L+ G+ + A VF + + + ++++++I G H E H+
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQH---EKVHE-- 218
Query: 218 MLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDM 277
+ +M EG + T +++S+ LG + + + N + + T+L+ +
Sbjct: 219 -VYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 278 YVKSGCIEKGVCVFQNMAEK----SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPD 333
Y K G +EK + +F+ M + ++YT +I GL G EA + ++L +GL PD
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 334 DVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLL----GRAGMLREA 389
V +++ G V E F M + PTV Y ++ L +
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGM-WRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 390 YGLIKSMPIKPNDVVWRSLLSA-CK---VHLNLEIGEIAAEKLFMLNPNNPGDYLVLANM 445
+ +K+ + P++ + L+ CK V L + E EK F P P Y L N
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF---PPCPAAYCSLINA 453
Query: 446 YARAHKWNDVARIRREMAD 464
+A ++ + +E+ +
Sbjct: 454 LGKAKRYEAANELFKELKE 472
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 28/300 (9%)
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
DN + ++ G V + + + G D++ LIS + G + A +VF
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 190 EKMDEK----SVASWSAIIGAHA-CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACI 244
+KM+E ++ +++ I+ W++ L+ M +G A ++ + L C
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI--APDAYTYNTLITCC 289
Query: 245 HLGSPNLGRCIHGILLRNISELNV-------VVKTSLIDMYVKSGCIEKGVCVFQNMA-- 295
GS +H + E+ V +L+D+Y KS ++ + V M
Sbjct: 290 KRGS------LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN 343
Query: 296 --EKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEG 353
S +Y +IS + G EA+++ +++ E+G PD Y +LS AG V
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 354 LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPI---KPNDVVWRSLLS 410
+ F+ M+ KP + + + + G G E + + + P+ V W +LL+
Sbjct: 404 MSIFEEMR-NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 142/359 (39%), Gaps = 22/359 (6%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G PD F Y LL G V+ + I + AG +I N I MYG G
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 186 CDVFEKMD----EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+F++++ + +W+ ++ M + + +M R G + E T +++S
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG-FVPERETFNTLIS 497
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE-KSRF 300
A GS ++ +L ++ +++ + G E+ V M + + +
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 301 SYTVMISGLSIHGHGAE-------ALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEG 353
+ S L + +G E A +V+S ++E P V+ ++ CS L+ E
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE----PRAVLLKTLVLVCSKCDLLPEA 613
Query: 354 LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLS 410
+ F ++ E P + MV + GR M+ +A G++ M P+ + SL+
Sbjct: 614 ERAFSELK-ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 411 ACKVHLNL-EIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHLV 468
+ + EI E L + Y + Y R + D +RI EM + +V
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 27/310 (8%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ P+ IY ++ G + + K G+ D N LI + + G +++A
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 186 CDVFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVS--V 239
KM K SV +++ +IG + + +C +L +M G +VS
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM----PNVVSYGT 499
Query: 240 LSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVC---------V 290
L C+ GS L I+ R++ + V K + +M + GC KG +
Sbjct: 500 LINCLCKGSKLLE---AQIVKRDMEDRGVSPKVRIYNMLI-DGCCSKGKIEDAFRFSKEM 555
Query: 291 FQNMAEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLV 350
+ E + +Y +I GLS+ G +EA + EI +GL PD Y ++S AG V
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNV 615
Query: 351 NEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGM-LREAYGLIKSMPIKPNDVVWRSLL 409
+ ++ M+ IKPT++ Y ++ L + G+ L E L M +KP+ +V+ +L
Sbjct: 616 QRCIALYEEMK-RSGIKPTLKTYHLLISLCTKEGIELTER--LFGEMSLKPDLLVYNGVL 672
Query: 410 SACKVHLNLE 419
VH ++E
Sbjct: 673 HCYAVHGDME 682
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 133/335 (39%), Gaps = 18/335 (5%)
Query: 74 ALAKWGSMEYACSIF-RQIEE---PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
AL K G +E A I R++ + P YNTMI G + G+ P
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
D+ Y L++ LG ++ + + GV + N LI YG+ D+
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 190 EKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
++M++ +V S+ +I + ++ DM G + ++ C
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG-VSPKVRIYNMLIDGCCS 541
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR----FS 301
G +L+ ELN+V +LID +G + + + ++ K F+
Sbjct: 542 KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
Y +ISG G+ + ++ E+ G+ P Y ++S C+ EG++ + +
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK-----EGIELTERLF 656
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM 396
E +KP + Y ++ G + +A+ L K M
Sbjct: 657 GEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQM 691
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 130/299 (43%), Gaps = 41/299 (13%)
Query: 144 LGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI 203
+G + EG ++ + K+ D+F + LI+ K + A +F++M ++ + I
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 204 IGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNL--------GRCI 255
L+ SR G + + +LS + P++ G C
Sbjct: 348 FTT------------LIHGHSRNGEIDLMKESYQKMLSKGLQ---PDIVLYNTLVNGFCK 392
Query: 256 HGILL--RNISE--------LNVVVKTSLIDMYVKSGCIEKGVCVF----QNMAEKSRFS 301
+G L+ RNI + + + T+LID + + G +E + + QN E R
Sbjct: 393 NGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVG 452
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
++ ++ G+ G +A + E+L G+ PDDV Y ++ A G G + K MQ
Sbjct: 453 FSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ 512
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSACKVHLN 417
+ + P+V Y +++ L + G ++ A L+ +M + P+D+ + +LL H N
Sbjct: 513 SDGHV-PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 165/419 (39%), Gaps = 53/419 (12%)
Query: 93 EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQ 152
P + + T+I G G P+ Y ++ G +
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK----SVASWSAIIGAHA 208
+ + A + D+ + N +I K + A ++F++M+ K +V ++S++I
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 209 CAEMWHQCLMLLGDM-------------------SREGHWRAEESTLVSVLSACIHLGSP 249
W LL DM +EG + E ++ I P
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI---DP 363
Query: 250 NL--------GRCIHGIL--LRNISEL--------NVVVKTSLIDMYVKSGCIEKGVCVF 291
++ G C+H L + + E +VV +LI + KS +E G +F
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 292 QNMAEK----SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHA 347
+ M+ + +YT +I GL G A +VF +++ +G+ PD + Y +L +
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 348 GLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVV 404
G + + L+ F MQ + +IK + Y M++ + +AG + + + L S+ +KPN V
Sbjct: 484 GKLEKALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 405 WRSLLSACKVHLNLEIGEIAAEKLFMLNP-NNPGDYLVLANMYARAHKWNDVARIRREM 462
+ +++S L+ +K+ P N G Y L + R A + REM
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/422 (19%), Positives = 168/422 (39%), Gaps = 90/422 (21%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G PD + L+K L G V E + + + + G D+ N +++ + G A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 186 CDVFEKMDEK---------------------------------------SVASWSAIIGA 206
D+ KM+E+ SV ++++++
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 207 HACAEMWHQCLMLLGDM-------------------SREGHWRAEESTLVSVLSACIHLG 247
A W+ +LL DM +EG + +++ I
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI--- 329
Query: 248 SPNL--------GRCIHG----------ILLRNISELNVVVKTSLIDMYVKSGCIEKGVC 289
SPN+ G C+ +++RN ++V TSLI Y ++ G+
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 290 VFQNMAEK----SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACS 345
VF+N++++ + +Y++++ G G A ++F E++ G+ PD + Y +L
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 346 HAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPND 402
G + + L+ F+++Q + K+ + Y +++ + + G + +A+ L S+P +KPN
Sbjct: 450 DNGKLEKALEIFEDLQ-KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 403 VVWRSLLSACKVHLNLEIGEIAAEKLFMLNPNNPGD--YLVLANMYARAHKWNDVARIRR 460
+ + ++S +L I K+ + N P D Y L + R A++
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEE-DGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 461 EM 462
EM
Sbjct: 568 EM 569
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 156/368 (42%), Gaps = 19/368 (5%)
Query: 44 MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE----EPGSFEY 99
MEE + ++++G D + ++ + L K G + YA S+F Q+E P Y
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDS--LCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 100 NTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFK 159
+++ G + I PD + L+ A G + +++ + +
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 160 AGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK----SVASWSAIIGAHACAEMWHQ 215
+ +IF LI+ + G + A +F M+ K V +++++I +
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 216 CLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
+ + +MS++G T +++ +G PN+ + + ++ N+ L+
Sbjct: 336 AMKIFYEMSQKG-LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 276 DMYVKSGCIEKGVCVFQNMAEKSR-------FSYTVMISGLSIHGHGAEALQVFSEILEE 328
+G ++K + +F++M ++ ++Y V++ GL +G +AL VF ++ +
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
+ + Y ++ AG V + F ++ +KP V Y M+ L R G+ E
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP-SKGVKPNVVTYTTMISGLFREGLKHE 513
Query: 389 AYGLIKSM 396
A+ L + M
Sbjct: 514 AHVLFRKM 521
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 133/322 (41%), Gaps = 46/322 (14%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G PD + L+ L ++E + + + + G+ D+ + +I K G + +A
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 186 CDVFEKMD----EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+F++M+ V +++++ + W LL M++ + + T +++
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNALID 255
Query: 242 ACIHLG-----------------SPNL--------GRCIHGIL--LRNISEL-------- 266
A + G +PN+ G C+ G + R + L
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 267 NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTVMISGLSIHGHGAEALQVF 322
+VV TSLI+ + K ++ + +F M++K + +YT +I G G A +VF
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 323 SEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK--IKPTVQHYGCMVDLL 380
S ++ G+ P+ Y +L + G V + L F++MQ + P + Y ++ L
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 381 GRAGMLREAYGLIKSMPIKPND 402
G L +A + + M + D
Sbjct: 436 CYNGKLEKALMVFEDMRKREMD 457
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Query: 296 EKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ 355
E ++T +I+G + EA+ + ++++E G+ PD V+Y ++ + G VN L
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 356 CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSA 411
F M+ + I+P V Y +V+ L +G R+A L++ M IKP+ + + +L+ A
Sbjct: 199 LFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 15/297 (5%)
Query: 53 HVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPG----SFEYNTMIRGNVS 108
L GF D+ + L+ L + G ++ A I ++I G YNT+I G
Sbjct: 495 QFLNKGFVVDTRTSNALLH--GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
G+ PDN+ Y L+ + V+E IQ + G+ D++
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVAS----WSAIIGAHACAEMWHQCLMLLGDMS 224
+ +I K + + F++M K+V ++ +I A+ + L L DM
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
+G +T S++ + + + + E NV T+LID Y K G +
Sbjct: 673 HKG-ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 285 EKGVCVFQNMAEKS----RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
K C+ + M K+ + +YTVMI G + G+ EA ++ +E+ E+G+ PD + Y
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 163/414 (39%), Gaps = 22/414 (5%)
Query: 70 VATCALAKWGSMEYACSIFRQIEE----PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXX 125
A A K G +E A +F ++EE P +NT+I G
Sbjct: 265 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ P Y L+K + + + + + K G ++ V N LI + + G++ A
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 186 CDVFEKMDEKSVA----SWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
++ + M K ++ +++ +I + LL +M G + + + SV+
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG-FNVNQGSFTSVIC 443
Query: 242 A-CIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK--- 297
C HL + R + +LLRN+S ++ T+LI K G K + ++ K
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLL-TTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 298 --SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ 355
+R S ++ GL G EA ++ EIL G D V Y ++S C ++E
Sbjct: 503 VDTRTS-NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 356 CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL---IKSMPIKPNDVVWRSLLSAC 412
F + + +KP Y ++ L + EA K + P+ + ++ C
Sbjct: 562 -FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 413 KVHLNLEIGEIAAEKLFMLNPN-NPGDYLVLANMYARAHKWNDVARIRREMADK 465
E G+ +++ N N Y L Y R+ + + +R +M K
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 300 FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKN 359
++Y+++I GL EA+Q + + G+ PD Y ++ C A EG + F
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 360 MQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSACKVHL 416
M ++P Y ++ R+G L A L + M I PN + SL+ +
Sbjct: 636 M-MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 417 NLEIGEIAAEKLFM--LNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHL 467
+E ++ E++ M L P N Y L + Y + + V + REM K++
Sbjct: 695 RVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 131/299 (43%), Gaps = 15/299 (5%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ PD +++ + A G V+E +++ + +AGV ++ N +I G CG A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 186 CDVFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
EKM E+ ++ ++S ++ A+ +L +M+++G + +++
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG-FPPNVIVYNNLID 373
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA----EK 297
+ I GS N I +++ L +LI Y K+G + + + M
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 298 SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCF 357
++ S+T +I L H AL+ E+L ++P + ++S G ++ L+ +
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 358 KNMQFEHK-IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKP---NDVVWRSLLSAC 412
QF +K + ++ L AG L EA+ + K + + + V + +L+S C
Sbjct: 494 --FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 15/297 (5%)
Query: 53 HVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPG----SFEYNTMIRGNVS 108
L GF D+ + L+ L + G ++ A I ++I G YNT+I G
Sbjct: 495 QFLNKGFVVDTRTSNALLH--GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 109 IMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFV 168
G+ PDN+ Y L+ + V+E IQ + G+ D++
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 169 QNGLISMYGKCGAIKHACDVFEKMDEKSVAS----WSAIIGAHACAEMWHQCLMLLGDMS 224
+ +I K + + F++M K+V ++ +I A+ + L L DM
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 225 REGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCI 284
+G +T S++ + + + + E NV T+LID Y K G +
Sbjct: 673 HKG-ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 285 EKGVCVFQNMAEKS----RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
K C+ + M K+ + +YTVMI G + G+ EA ++ +E+ E+G+ PD + Y
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 163/414 (39%), Gaps = 22/414 (5%)
Query: 70 VATCALAKWGSMEYACSIFRQIEE----PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXX 125
A A K G +E A +F ++EE P +NT+I G
Sbjct: 265 TAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ P Y L+K + + + + + K G ++ V N LI + + G++ A
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 186 CDVFEKMDEKSVA----SWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
++ + M K ++ +++ +I + LL +M G + + + SV+
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG-FNVNQGSFTSVIC 443
Query: 242 A-CIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK--- 297
C HL + R + +LLRN+S ++ T+LI K G K + ++ K
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLL-TTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 298 --SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ 355
+R S ++ GL G EA ++ EIL G D V Y ++S C ++E
Sbjct: 503 VDTRTS-NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 356 CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL---IKSMPIKPNDVVWRSLLSAC 412
F + + +KP Y ++ L + EA K + P+ + ++ C
Sbjct: 562 -FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 413 KVHLNLEIGEIAAEKLFMLNPN-NPGDYLVLANMYARAHKWNDVARIRREMADK 465
E G+ +++ N N Y L Y R+ + + +R +M K
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 300 FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKN 359
++Y+++I GL EA+Q + + G+ PD Y ++ C A EG + F
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 360 MQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSACKVHL 416
M ++P Y ++ R+G L A L + M I PN + SL+ +
Sbjct: 636 M-MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 417 NLEIGEIAAEKLFM--LNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHL 467
+E ++ E++ M L P N Y L + Y + + V + REM K++
Sbjct: 695 RVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 131/299 (43%), Gaps = 15/299 (5%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ PD +++ + A G V+E +++ + +AGV ++ N +I G CG A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 186 CDVFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
EKM E+ ++ ++S ++ A+ +L +M+++G + +++
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG-FPPNVIVYNNLID 373
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA----EK 297
+ I GS N I +++ L +LI Y K+G + + + M
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 298 SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCF 357
++ S+T +I L H AL+ E+L ++P + ++S G ++ L+ +
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 358 KNMQFEHK-IKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKP---NDVVWRSLLSAC 412
QF +K + ++ L AG L EA+ + K + + + V + +L+S C
Sbjct: 494 --FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 17/284 (5%)
Query: 143 LLGGVKEG--IQIHGHVF----KAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD--- 193
L+GG+ E I+I VF G D+ N L+ YGK G I +++++M
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 194 -EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG 252
E + + + +I A L L D+ + + T ++ G
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 253 RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTVMISG 308
+ + +L N + LI+ + K+G + +F+ M ++ +Y+V++
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970
Query: 309 LSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKP 368
L + G E L F E+ E GL PD V Y +++ + + E L F M+ I P
Sbjct: 971 LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 369 TVQHYGCMVDLLGRAGMLREA---YGLIKSMPIKPNDVVWRSLL 409
+ Y ++ LG AGM+ EA Y I+ ++PN + +L+
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 301 SYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM 360
+Y +M+ S G EA+++ SE++E G PD +V +++ A V+E + F M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 361 QFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK---PNDVVWRSLLSA-CK 413
+ E K+KPTV Y ++ LG+ G ++EA L + M K PN + + +L CK
Sbjct: 565 K-EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 126/295 (42%), Gaps = 14/295 (4%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
GI P+ Y L+ + + + +++ G++ GV + I YGK G A
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 186 CDVFEKMDEKSVA----SWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+ FEKM K +A + +A + + A A + + + G +S +++
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG--LVPDSVTYNMMM 510
Query: 242 ACI-HLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE---- 296
C +G + + ++ N E +V+V SLI+ K+ +++ +F M E
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 297 KSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
+ +Y +++GL +G EA+++F ++++G P+ + + + V L+
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP--IKPNDVVWRSLL 409
M + P V Y ++ L + G ++EA M + P+ V +LL
Sbjct: 631 LFKM-MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 684
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 124/301 (41%), Gaps = 21/301 (6%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ P+ + + ++ G + E +I + G G D+ LI C A K
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL--CTARKLD 310
Query: 186 C--DVFEKMD----EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSV 239
C +VFEKM + ++ ++ + +M ++GH + + V
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 240 LSACIHLGSPNLGRCIHGI-LLRNISEL-NVVVKTSLIDMYVKSGCIEKGVCVFQNM--- 294
+ C + N G + ++R+ L N+ +LI ++ ++ + +F NM
Sbjct: 371 DALC---KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 295 -AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEG 353
+ + ++Y V I G AL+ F ++ +G+AP+ V L + + AG E
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 354 LQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLS 410
Q F ++ + + P Y M+ + G + EA L+ M +P+ +V SL++
Sbjct: 488 KQIFYGLK-DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 411 A 411
Sbjct: 547 T 547
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 124/296 (41%), Gaps = 15/296 (5%)
Query: 128 GPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACD 187
P+ Y L+ G + ++ + KAG+ ++ N ++ K + AC
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 188 VFEKMDEKSVA----SWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSAC 243
+FE+MD K ++ ++I + M + R S++
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM-LDSDCRTNSIVYTSLIKNF 492
Query: 244 IHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRF--- 300
+ G G I+ ++ ++ + + +D K+G EKG +F+ + + RF
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR-RFVPD 551
Query: 301 --SYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFK 358
SY+++I GL G E ++F + E+G D Y V+ G VN+ Q +
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 359 NMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLI---KSMPIKPNDVVWRSLLSA 411
M+ +PTV YG ++D L + L EAY L KS I+ N V++ SL+
Sbjct: 612 EMK-TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 121/296 (40%), Gaps = 22/296 (7%)
Query: 186 CDVFEKMD----EKSVASWSAIIGAHACAEMWHQCLML--------LGDMSREGHWRAEE 233
C F+ +D E SVA + + + C EM C+ + M R+ +R
Sbjct: 111 CRNFDALDQILGEMSVAGFGPSV--NTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAF 168
Query: 234 STLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQN 293
S +++ A + ++ + + E V + T+LI + K G ++ + +
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 294 MAEKSRFS----YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGL 349
M S + Y V I G A + F EI GL PD+V Y ++ A
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 350 VNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK---PNDVVWR 406
++E ++ F++++ ++ P Y M+ G AG EAY L++ K P+ + +
Sbjct: 289 LDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN 347
Query: 407 SLLSACKVHLNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREM 462
+L+ + ++ E++ N Y +L +M RA K + +R M
Sbjct: 348 CILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 142/352 (40%), Gaps = 17/352 (4%)
Query: 75 LAKWGSMEYACSIFRQIE----EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPD 130
L K ++ AC++F +++ P + ++I G + +
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN 481
Query: 131 NFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFE 190
+ +Y L+K G ++G +I+ + D+ + N + K G + +FE
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 191 KMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHL 246
++ + S+S +I A ++ L M +G + + + C
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC-KC 600
Query: 247 GSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSY 302
G N + + E VV S+ID K +++ +F+ K + Y
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 303 TVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQF 362
+ +I G G EA + E++++GL P+ + +L A A +NE L CF++M+
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK- 719
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSA 411
E K P YG +++ L + +A+ + M +KP+ + + +++S
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 153/370 (41%), Gaps = 29/370 (7%)
Query: 74 ALAKWGSMEYACSIFRQIEE----PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
+LA++G ++ ++ ++ E P + YN M+ G + N G+ P
Sbjct: 192 SLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDP 251
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGA--IKHACD 187
D F Y L+ + ++ + G + LI +G C A I A D
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI--HGLCVARRIDEAMD 309
Query: 188 VFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSAC 243
+F KM + +V +++ +I + +E + L L+ +M G + V + S C
Sbjct: 310 LFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369
Query: 244 IHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SR 299
R + G +L NV+ +LI+ Y K G IE V V + M + +
Sbjct: 370 SQCKFEK-ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 300 FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKN 359
+Y +I G + +A+ V +++LE + PD V Y ++ +G + +
Sbjct: 429 RTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 360 MQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSA-CK-- 413
M + + P Y M+D L ++ + EA L S+ + PN V++ +L+ CK
Sbjct: 488 MN-DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 414 ----VHLNLE 419
HL LE
Sbjct: 547 KVDEAHLMLE 556
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 111/280 (39%), Gaps = 46/280 (16%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ PD Y LL ACS + +++ + D++ N +IS+YG+CG A
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 186 CDVFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+F +++ K ++++++ A A + + M + G + E
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE--------- 402
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKS--- 298
+ ++I MY K G ++ + ++++M S
Sbjct: 403 ---------------------------MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 299 --RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
+YTV+I L EA + SE+L+ G+ P Y ++ + AG E
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM 396
F M KP Y M+D+L R R+A+GL + M
Sbjct: 496 FSCM-LRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 160/381 (41%), Gaps = 35/381 (9%)
Query: 162 VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK----SVASWSAIIGAH-ACAEMWHQC 216
VGD + V N ++ +Y + G A ++ + M ++ + S++ +I A +
Sbjct: 221 VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNL 280
Query: 217 LMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLID 276
+ L DM R R + T ++LSAC + + + + + + ++ ++I
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 277 MYVKSGCIEKGVCVFQNMAEKSRF----SYTVMISGLSIHGHGAEALQVFSEILEEGLAP 332
+Y + G + +F + K F +Y ++ + + + +V+ ++ + G
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 333 DDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL 392
D++ Y ++ G ++ LQ +K+M+ P Y ++D LG+A EA L
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 393 IKSM---PIKPNDVVWRSLLSACKVHLNLEIGEIAAEKLF--MLNPNNPGD---YLVLAN 444
+ M IKP + +L+ E AE F ML D Y V+ +
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKRE----EAEDTFSCMLRSGTKPDNLAYSVMLD 516
Query: 445 MYARAHKWNDVARIRREM-ADKHLVQTPGFSMVEAERKVYKFVSQDRSQPEFDTIYNMIH 503
+ R ++ + R+M +D H TP +++ E + + ++RS D I I
Sbjct: 517 VLLRGNETRKAWGLYRDMISDGH---TPSYTLYEL--MILGLMKENRS----DDIQKTIR 567
Query: 504 QMEWQLEFEGYKP-DTSQVLL 523
ME E G P + S VL+
Sbjct: 568 DME---ELCGMNPLEISSVLV 585
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 182/439 (41%), Gaps = 40/439 (9%)
Query: 37 LLKRCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE---- 92
+L CK ME K + + L + FC + + YA S +I
Sbjct: 107 VLALCKQMES-KGIAHSIYTLSIMINCFC-----------RCRKLSYAFSTMGKIMKLGY 154
Query: 93 EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQ 152
EP + +NT++ G G P L+ L G V + +
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV----ASWSAIIGAHA 208
+ + + G + ++++ K G A ++ KM+E+++ +S II
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 209 CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLG-RCIHGILLRNISELN 267
L +M +G ++A+ T +++ + G + G + + ++ R IS N
Sbjct: 275 KDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP-N 332
Query: 268 VVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTVMISGLSIHGHGAEALQVFS 323
VV + LID +VK G + + + + M ++ + +Y +I G EA+Q+
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRA 383
++ +G PD + + +++ A +++GL+ F+ M I TV Y +V ++
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT-YNTLVQGFCQS 451
Query: 384 GMLREAYGLIKSM---PIKPNDVVWRSLLSAC----KVHLNLEI-GEIAAEKLFMLNPNN 435
G L A L + M ++P+ V ++ LL ++ LEI G+I K+ + +
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL----D 507
Query: 436 PGDYLVLANMYARAHKWND 454
G Y+++ + A K +D
Sbjct: 508 IGIYMIIIHGMCNASKVDD 526
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 169/419 (40%), Gaps = 68/419 (16%)
Query: 30 NEQGWYPLLK-RCKS------MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSME 82
NE + P+L CKS ME +++ +KL D+ S ++ L K GS++
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL----DAVKYSIIID--GLCKDGSLD 280
Query: 83 YACSIFRQIEEPG----SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLL 138
A ++F ++E G YNT+I G + I P+ + L+
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 139 KACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK--- 195
+ G ++E Q+ + + G+ + N LI + K ++ A + + M K
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 196 -SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRC 254
+ +++ +I + A L L +MS
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMS------------------------------ 430
Query: 255 IHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTVMISGLS 310
+ G++ N V +L+ + +SG +E +FQ M + SY +++ GL
Sbjct: 431 LRGVIA------NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 311 IHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTV 370
+G +AL++F +I + + D +Y+ ++ +A V++ F ++ + +K
Sbjct: 485 DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG-VKLDA 543
Query: 371 QHYGCMVDLLGRAGMLREAYGLIKSMPIK---PNDVVWRSLLSACKVHLNLEIGEIAAE 426
+ Y M+ L R L +A L + M + P+++ + L+ A HL + AAE
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA---HLGDDDATTAAE 599
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 141/355 (39%), Gaps = 44/355 (12%)
Query: 93 EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQ 152
EP F YN +++ G PD Y ++ + +G VKEG +
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAIIGAHACAEM 212
+ F+ V + NGL + GA + ++ EK +V S+S +I +
Sbjct: 238 L-AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNIS-ELNVVVK 271
L M + G TL S++ C G+ + ++R + NVV
Sbjct: 297 IELAFSFLTQMLKRG-CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAY 355
Query: 272 TSLIDMYVKSGCIEKGVCVFQNMAE----KSRFSYTVMISGLSIHGHGAEALQVFSEILE 327
+L+ + G I K V VF +M E + +Y +I+G + G A+ +++++L
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 328 EGLAPDDVVYVGVLSA-CSH----------------------------------AGLVNE 352
G P+ VVY ++ A C H AG ++
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 353 GLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRS 407
+ F+ M+ +H+ P + Y ++D L +A + EAYGL + + ++ V W S
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR--GVEWSS 528
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 156/383 (40%), Gaps = 15/383 (3%)
Query: 93 EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQ 152
+P + + T++ G G PD Y ++ G +
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK----SVASWSAIIGAHA 208
+ + K + D+ + N +I K + A D+F KM+ K V +++ +I
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 209 CAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISEL-N 267
W LL DM E + + +++ A + G ++ ++++ +
Sbjct: 297 NYGRWSDASRLLSDM-LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 268 VVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTVMISGLSIHGHGAEALQVFS 323
VV +LI + K +E+G+ VF+ M+++ + +YT +I G A VF
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 324 EILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRA 383
+++ +G+ PD + Y +L + G V L F+ MQ + +K + Y M++ L +A
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ-KRDMKLDIVTYTTMIEALCKA 474
Query: 384 GMLREAYGLIKSMP---IKPNDVVWRSLLSA-CKVHLNLEIGEIAAEKLFMLNPNNPGDY 439
G + + + L S+ +KPN V + +++S C+ L E + E N G Y
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 440 LVLANMYARAHKWNDVARIRREM 462
L R A + +EM
Sbjct: 535 NTLIRARLRDGDEAASAELIKEM 557
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 137/350 (39%), Gaps = 21/350 (6%)
Query: 65 CGSNLVATCA----LAKWGSMEYACSIFRQIEEPGSFE-----YNTMIRGNVSIMNXXXX 115
C +LV A L K G + A ++ ++E+ G E YNT+I G +
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK-GKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 116 XXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISM 175
GI PD F Y L+ G + ++ + + + D+ N LI
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 176 YGKCGAIKHACDVFEKMDEK-----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWR 230
+ K G + A ++++M + V +++ +I + + + + +MS+ G
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG-LV 388
Query: 231 AEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCV 290
T +++ + + + ++ + +++ L+D +G +E + V
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 291 FQNMAEKSR----FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSH 346
F+ M ++ +YT MI L G + +F + +G+ P+ V Y ++S
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 347 AGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM 396
GL E F M+ E P Y ++ R G + LIK M
Sbjct: 509 KGLKEEADALFVEMK-EDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 121/295 (41%), Gaps = 12/295 (4%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
GI + + Y + + + I G + K G G I N L++ + I A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 186 CDVFEKMDE----KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+ ++M E +++ ++ + + L+ M +G + + T +V++
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVIN 223
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK---- 297
G P+L + + + E +VV+ ++ID K ++ +F M K
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 298 SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCF 357
F+Y +IS L +G ++A ++ S++LE+ + PD V + ++ A G + E + +
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 358 KNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLL 409
M P V Y ++ + + E + + M + N V + +L+
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 16/301 (5%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G PD F + L+ L E + + + + G D+ +++ K G I A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 186 CDVFEKMD----EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+ +KM+ E V ++ II + L L +M +G R + T S++S
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG-IRPDVFTYSSLIS 301
Query: 242 ACIHLGS-PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR- 299
+ G + R + ++ R I+ NVV ++LID +VK G + + ++ M ++S
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 300 ---FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
F+Y+ +I+G +H EA +F ++ + P+ V Y ++ A V EG++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSA-C 412
F+ M + TV Y ++ +A A + K M + PN + + LL C
Sbjct: 421 FREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 413 K 413
K
Sbjct: 480 K 480
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 265 ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE----KSRFSYTVMISGLSIHGHGAEALQ 320
E ++V +SL++ Y S I V + M E F++T +I GL +H +EA+
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 321 VFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLL 380
+ ++++ G PD V Y V++ G ++ L K M+ + KI+ V Y ++D L
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYNTIIDGL 268
Query: 381 GRAGMLREAYGLIKSMP---IKPNDVVWRSLLS 410
+ + +A L M I+P+ + SL+S
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 136/335 (40%), Gaps = 14/335 (4%)
Query: 74 ALAKWGSMEYACSIFRQIE----EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
L K+ M+ A ++F +++ P F Y+++I + I P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
+ + L+ A G + E +++ + K + DIF + LI+ + + A +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 190 EKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
E M K +V ++S +I A+ + + L +MS+ G T +++
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG-LVGNTVTYTTLIHGFFQ 445
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA----EKSRFS 301
+ + + ++ N++ L+D K+G + K + VF+ + E ++
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
Y +MI G+ G + ++F + +G++P+ + Y ++S G E K M+
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM 396
E P Y ++ R G + LIK M
Sbjct: 566 -EDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 145/364 (39%), Gaps = 48/364 (13%)
Query: 94 PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQI 153
P + + T+I G G P+ Y ++ G + +
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 154 HGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK----SVASWSAIIGAHAC 209
+ A + D+ + N +I K + A ++F++M+ K +V ++S++I
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 210 AEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLG-----------------SPNL- 251
W LL DM E T +++ A + G P++
Sbjct: 233 YGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 252 -------GRCIHGILLRNISELNVVVK----------TSLIDMYVKSGCIEKGVCVFQNM 294
G C+H L + +V +LI + KS +E G +F+ M
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 295 AEK----SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLV 350
+ + +YT +I GL G A +VF +++ +G+ PD + Y +L + G +
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 351 NEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRS 407
+ L+ F MQ + +IK + Y M++ + +AG + + + L S+ +KPN V + +
Sbjct: 412 EKALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 408 LLSA 411
++S
Sbjct: 471 MISG 474
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 143/364 (39%), Gaps = 27/364 (7%)
Query: 46 EFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE----EPGSFEYNT 101
E ++ A V+ DS C K+ ++ A ++F+++E P Y++
Sbjct: 177 EAAKIEADVVIFNTIIDSLC-----------KYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 102 MIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAG 161
+I S I P+ + L+ A G E ++H + K
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 162 VGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKS----VASWSAIIGAHACAEMWHQCL 217
+ DIF N LI+ + + A +FE M K + +++ +I ++
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 218 MLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDM 277
L +MS G + T +++ H G + + + ++ + +++ + L+D
Sbjct: 346 ELFREMSHRG-LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 278 YVKSGCIEKGVCVFQNMAEKSR-----FSYTVMISGLSIHGHGAEALQVFSEILEEGLAP 332
+G +EK + VF M +KS + YT MI G+ G + +F + +G+ P
Sbjct: 405 LCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 333 DDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGL 392
+ V Y ++S L+ E K M+ E P Y ++ R G + L
Sbjct: 464 NVVTYNTMISGLCSKRLLQEAYALLKKMK-EDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522
Query: 393 IKSM 396
I+ M
Sbjct: 523 IREM 526
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 49/271 (18%)
Query: 157 VFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV----ASWSAIIGAHACAEM 212
V G ++ LI+ + K G + A D+F+ M+++ + ++S +I + A M
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKT 272
GH + S +H G +L+VVV +
Sbjct: 337 LGM-----------GH---------KLFSQALHKGV----------------KLDVVVFS 360
Query: 273 SLIDMYVKSGCIEKGVCVFQNM----AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
S ID+YVKSG + V++ M + +YT++I GL G EA ++ +IL+
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
G+ P V Y ++ G + G +++M + P V YG +VD L + G++
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 389 AYGLIKSM---PIKPNDVVWRSLLSA-CKVH 415
A M I+ N VV+ SL+ C+++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 144/350 (41%), Gaps = 45/350 (12%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
GI P+ Y L+K G + E ++G + K G+ I + LI + KCG ++
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
++E M + I G +L+ +S++G ++ +
Sbjct: 446 FALYEDMIKMGYPPDVVIYG------------VLVDGLSKQG-----------LMLHAMR 482
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA----EKSRFS 301
LG+ I LNVVV SLID + + ++ + VF+ M + +
Sbjct: 483 FSVKMLGQSIR---------LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA-CSHAGLVNEGLQCFKNM 360
+T ++ + G EAL +F + + GL PD + Y ++ A C H GLQ F M
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK-PTIGLQLFDLM 592
Query: 361 QFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSACKVHLN 417
Q +KI + ++ LL + + +A ++ ++P+ V + +++
Sbjct: 593 Q-RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 418 LEIGEIAAEKLFMLNPNNPG--DYLVLANMYARAHKWNDVARIRREMADK 465
L+ E E L + P P +L ++ + + + R+ MA+K
Sbjct: 652 LDEAERIFE-LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 700
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 129/344 (37%), Gaps = 24/344 (6%)
Query: 87 IFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGG 146
I ++ EP Y+++I G N G PD IY L+ S
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS---- 472
Query: 147 VKEGIQIHGHVFKA-----GVGDDIFVQNGLISMYGKCGAIKHACDVFEKMD----EKSV 197
K+G+ +H F + ++ V N LI + + A VF M + V
Sbjct: 473 -KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 198 ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHG 257
A+++ ++ + L L M + G + + + C H+ P +G +
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM-KPTIGLQLFD 590
Query: 258 ILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR----FSYTVMISGLSIHG 313
++ RN ++ V +I + K IE F N+ E +Y MI G
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 314 HGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHY 373
EA ++F + P+ V ++ ++ ++ F M E KP Y
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKPNAVTY 709
Query: 374 GCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSA-CK 413
GC++D ++ + ++ L + M I P+ V + ++ CK
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 18/266 (6%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ PD Y L+ A G+Q+ + + + DI V N +I + KC I+ A
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 186 CDVFEKMDE----KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
F + E + +++ +I + + + ++ + + TL ++
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIH 679
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK---- 297
+ + I+ S+ N V L+D + KS IE +F+ M EK
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739
Query: 298 SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCF 357
S SY+++I GL G EA +F + ++ L PD V Y ++ G + E +
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799
Query: 358 KNMQFEHKIKPTVQHYGCMVDLLGRA 383
++M + +KP DLL RA
Sbjct: 800 EHM-LRNGVKPD--------DLLQRA 816
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 157/396 (39%), Gaps = 29/396 (7%)
Query: 77 KWGSMEYACSIFRQIEEPG----SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNF 132
+ G ++ A S ++ + G + YN++I G+ + + P
Sbjct: 414 RRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVV 473
Query: 133 IYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKM 192
Y L+ G + + ++++ + G+ I+ L+S + G I+ A +F +M
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 193 DEKSV----ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
E +V +++ +I + + L +M+ +G S + C+ G
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT-GQ 592
Query: 249 PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTV 304
+ + L + ELN + T L+ + + G +E+ + V Q M ++ Y V
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 305 MISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEH 364
+I G H + E+ + GL PDDV+Y ++ A S G E + M E
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 365 KIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM-PIK--PNDVVWRSLLSACKVHLNLEIG 421
+ P Y +++ L +AG + EA L M P+ PN V + L L G
Sbjct: 713 CV-PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI------LTKG 765
Query: 422 EIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVAR 457
E+ +K L+ +L + A +N + R
Sbjct: 766 EVDMQKAVELHNA------ILKGLLANTATYNMLIR 795
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/388 (19%), Positives = 146/388 (37%), Gaps = 87/388 (22%)
Query: 74 ALAKWGSMEYACSIFRQIEE----PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
L K G +E A ++ +++ + P F YN +I G+ P
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA---- 185
++ Y L+ G + + G + G+ ++ N LI+ + K G I A
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
++ K E +V ++++++G + ++ L L +M+ +G
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI----------------- 503
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE----KSRFS 301
+P+ + T+L+ ++G I V +F MAE +R +
Sbjct: 504 --APS-----------------IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPD---------------------------- 333
Y VMI G G ++A + E+ E+G+ PD
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 334 -------DVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGML 386
++ Y G+L G + E L + M + + + YG ++D +
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEM-VQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 387 REAYGLIKSM---PIKPNDVVWRSLLSA 411
+ +GL+K M +KP+DV++ S++ A
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 13/251 (5%)
Query: 170 NGLISMYGKCGAIKHACDVFEKMDEKSVAS----WSAIIGAHACAEMWHQCLMLLGDMSR 225
+ L+ K G I+ A ++ +++ + V+ ++A+I + +H+ +L M +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 226 EGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIE 285
G R + T ++ G + G ++ +L+V SLI+ + K G I
Sbjct: 396 IG-LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 286 KGVCVFQNMAEK----SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVL 341
M K + +YT ++ G G +AL+++ E+ +G+AP + +L
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 342 SACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---I 398
S AGL+ + ++ F M E +KP Y M++ G + +A+ +K M I
Sbjct: 515 SGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 399 KPNDVVWRSLL 409
P+ +R L+
Sbjct: 574 VPDTYSYRPLI 584
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 49/271 (18%)
Query: 157 VFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSV----ASWSAIIGAHACAEM 212
V G ++ LI+ + K G + A D+F+ M+++ + ++S +I + A M
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKT 272
GH + S +H G +L+VVV +
Sbjct: 337 LGM-----------GH---------KLFSQALHKGV----------------KLDVVVFS 360
Query: 273 SLIDMYVKSGCIEKGVCVFQNM----AEKSRFSYTVMISGLSIHGHGAEALQVFSEILEE 328
S ID+YVKSG + V++ M + +YT++I GL G EA ++ +IL+
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 329 GLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLRE 388
G+ P V Y ++ G + G +++M + P V YG +VD L + G++
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 389 AYGLIKSM---PIKPNDVVWRSLLSA-CKVH 415
A M I+ N VV+ SL+ C+++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 143/362 (39%), Gaps = 30/362 (8%)
Query: 40 RCKSMEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWG----SMEYACSIFRQIEEPG 95
+C ++ ++ ++K+G+ D LV L+K G +M ++ + Q
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD--GLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 96 SFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKE------ 149
+N++I G + GI PD + +++ + +
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555
Query: 150 GIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDE----KSVASWSAIIG 205
G+Q+ + + + DI V N +I + KC I+ A F + E + +++ +I
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 206 AHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISE 265
+ + + ++ + + TL ++ + + I+ S+
Sbjct: 616 GYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 266 LNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTVMISGLSIHGHGAEALQV 321
N V L+D + KS IE +F+ M EK S SY+++I GL G EA +
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 322 FSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLG 381
F + ++ L PD V Y ++ G + E +++M + +KP DLL
Sbjct: 735 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM-LRNGVKPD--------DLLQ 785
Query: 382 RA 383
RA
Sbjct: 786 RA 787
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 115/297 (38%), Gaps = 46/297 (15%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
GI P+ Y L+K G + E ++G + K G+ I + LI + KCG ++
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 186 CDVFEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
++E M + I G +L+ +S++G ++ +
Sbjct: 446 FALYEDMIKMGYPPDVVIYG------------VLVDGLSKQG-----------LMLHAMR 482
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA------EKSR 299
LG+ I LNVVV SLID + + ++ + VF+ M + +
Sbjct: 483 FSVKMLGQSIR---------LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 300 FS----YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQ 355
F+ ++M H LQ+F + ++ D V V+ + + +
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 356 CFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA---YGLIKSMPIKPNDVVWRSLL 409
F N+ E K++P + Y M+ L EA + L+K P PN V L+
Sbjct: 594 FFNNL-IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 135/361 (37%), Gaps = 26/361 (7%)
Query: 76 AKWGSMEYACSIFRQIE----EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDN 131
K G + A +++++ P Y +I+G G+ P
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 132 FIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEK 191
Y L+ G ++ G ++ + K G D+ + L+ K G + HA K
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 192 MDEKS----VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSA----- 242
M +S V ++++I + + L + M G + + +T +V+
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMED 545
Query: 243 --CIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR- 299
C H+ P +G + ++ RN ++ V +I + K IE F N+ E
Sbjct: 546 AFCKHM-KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 604
Query: 300 ---FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
+Y MI G EA ++F + P+ V ++ ++ ++
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLLSA-C 412
F M E KP YGC++D ++ + ++ L + M I P+ V + ++ C
Sbjct: 665 FSIMA-EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 413 K 413
K
Sbjct: 724 K 724
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/373 (19%), Positives = 151/373 (40%), Gaps = 25/373 (6%)
Query: 11 HLLSLPSTPPQCSELSTRFNEQGWYPLLKRCKSM----------EEFKQVHAHVLKLGFF 60
H + L S P + S + + G+ P L S+ E+ + +L +GF
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 61 CDSFCGSNLVATCALAKWGSMEYACSIFRQI----EEPGSFEYNTMIRGNVSIMNXXXXX 116
+ + L+ L K + +A +F Q+ P YN ++ G I
Sbjct: 186 PNVVTYTTLIR--CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 117 XXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMY 176
I P+ + L+ A +G + E +++ + + V D+F LI+
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 177 GKCGAIKHACDVFEKMDEKSV----ASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAE 232
G + A +F M+ ++ +I ++ + + +MS++G
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 233 ESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQ 292
+ V + C+ +G P++ + + + + ++ L+D +G +EK + +F+
Sbjct: 364 ITYTVLIQGYCL-VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 293 NMAEKSR----FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAG 348
M ++ +YT++I G+ G +A +F + +G+ P+ + Y ++S G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 349 LVNEGLQCFKNMQ 361
L++E FK M+
Sbjct: 483 LIHEADSLFKKMK 495
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 118/297 (39%), Gaps = 48/297 (16%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G PD + LL +++ I + + G ++ LI K + HA
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 186 CDVFEKM----DEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
++F +M +V +++A++ W LL DM +
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK---------------- 251
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR-- 299
R I E NV+ T+LID +VK G + + ++ M + S
Sbjct: 252 -------------------RRI-EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 300 --FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCF 357
F+Y +I+GL ++G EA Q+F + G P++V+Y ++ + V +G++ F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 358 KNMQFEHKIKPTVQHYGCMVD---LLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
M + + T+ Y ++ L+GR + +E + + S P+ + LL
Sbjct: 352 YEMSQKGVVANTIT-YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 111/285 (38%), Gaps = 24/285 (8%)
Query: 69 LVATCALAKWGSMEYAC-SIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGI 127
+ C + +WG + + ++ EP + +I V + +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 128 GPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACD 187
PD F Y L+ + G + E Q+ + + G + + LI + K ++
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 188 VFEKMDEKSVA----SWSAIIGAHACAEMWHQCLMLLGDMSRE-----GHWRAEES--TL 236
+F +M +K V +++ +I + CL+ D+++E RA T
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGY--------CLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 237 VSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE 296
+L G I + + ++N+V T +I K G +E +F ++
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 297 K----SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVY 337
K + +YT MISG G EA +F ++ E+G P++ VY
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 147/379 (38%), Gaps = 53/379 (13%)
Query: 68 NLVATCALAKWGSMEYACSIFRQIEE----PGSFEYNTMIRGNVSIMNXXXXXXXXXXXX 123
NLV AL K ++ A +FR + E P + Y T++ G
Sbjct: 191 NLVIK-ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 124 XXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKC--GA 181
G P IY L+ G + ++ ++F G + N LI +G C G
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI--HGLCLKGK 307
Query: 182 IKHACDVFEKMDEKSV----ASWSAIIGAHACAEMWHQCLMLLGDMSREGH--------- 228
+ A + E+M ++ +I + LL M G+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 229 -----------------WR--AEESTLVSVLSACIHL------GSPNLGRCIHGILLRNI 263
WR AE+ +++ + + G PN + I ++ +
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 264 SELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE----KSRFSYTVMISGLSIHGHGAEAL 319
N +SL+ + K+G E+ V V++ M + +++F Y+V+I GL G EA+
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 320 QVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNM--QFEHKIKPTVQHYGCMV 377
V+S++L G+ PD V Y ++ G ++ L+ + M Q E K +P V Y ++
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 378 DLLGRAGMLREAYGLIKSM 396
D L + A L+ SM
Sbjct: 548 DGLCMQKDISRAVDLLNSM 566
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 37 LLKRCKSMEEF---KQVHAHVLKLGFFC--DSFCGSNLVATCALAKWGSMEYACSIFRQI 91
+LK C + +F KQVHA KLGF DS+ +L+ ++ +E A + Q+
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRF--YGEFRCLEDANLVLHQL 256
Query: 92 EEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLG-GVKEG 150
+ + + + GI + ++ +LKACS + G + G
Sbjct: 257 SNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSG 316
Query: 151 IQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFE-KMDEKSVASWSAIIGAHAC 209
Q+H + K G D ++ LI MYGK G +K A VF+ DE SV+ W+A++ ++
Sbjct: 317 QQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQ 376
Query: 210 AEMWHQCLMLLGDMSREG 227
++ + + LL M G
Sbjct: 377 NGIYIEAIKLLYQMKATG 394
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 128/291 (43%), Gaps = 19/291 (6%)
Query: 133 IYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKM 192
IY L K + + ++ H+ K+ + I N L+ M+ CG + +F++M
Sbjct: 90 IYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRM 149
Query: 193 DEKSVASWSAIIGAHACAEM--WHQCLMLLGDM---SREGHWRAEESTLVSVLSACIHLG 247
+ SW+ + C EM + L M S++G ++ L VL AC +
Sbjct: 150 PHRDFHSWAIVF--LGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIR 207
Query: 248 SPNLGRCIHGIL--LRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFSYTVM 305
LG+ +H + L I E + + SLI Y + C+E V ++ + ++
Sbjct: 208 DFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAK 267
Query: 306 ISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHK 365
++ G E ++ F E+ G+ + V+ VL ACS V++G + + + +
Sbjct: 268 VTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS---WVSDGGRSGQQVH-ANA 323
Query: 366 IKPTVQHYGC-----MVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
IK + C ++++ G+ G +++A + KS + + W +++++
Sbjct: 324 IKLGFES-DCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVAS 373
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 131 NFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGD--DIFVQNGLISMYGKCGAIKHACDV 188
++I +LKAC+++ + G Q+H K G D D ++ LI YG+ ++ A V
Sbjct: 193 SWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLV 252
Query: 189 FEKMDEKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGS 248
++ + +W+A + + + + +M G + S +VL AC +
Sbjct: 253 LHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHG-IKKNVSVFSNVLKACSWVSD 311
Query: 249 PNL-GRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSRFS-YTVMI 306
G+ +H ++ E + +++ LI+MY K G ++ VF++ +++ S + M+
Sbjct: 312 GGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMV 371
Query: 307 SGLSIHGHGAEALQVFSEILEEGLAPDDVV 336
+ +G EA+++ ++ G+ D +
Sbjct: 372 ASYMQNGIYIEAIKLLYQMKATGIKAHDTL 401
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 155/372 (41%), Gaps = 41/372 (11%)
Query: 60 FCDSFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXX 119
+ D C N V + + C + R EP Y +I G
Sbjct: 120 YLDLLCRENKVG------FAVQTFFCMVQRG-REPDVVSYTILINGLFRAGKVTDAVEIW 172
Query: 120 XXXXXXGIGPDNFIYPFLLKACS-LLGGVKEGIQIH-------GHVFKAGVGDDIFVQNG 171
G+ PDN KAC+ L+ G+ ++ + A V V N
Sbjct: 173 NAMIRSGVSPDN-------KACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNA 225
Query: 172 LISMYGKCGAIKHACDVFEKMD----EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREG 227
LIS + K G I+ A + M E + +++ ++ + M + ++ +M R G
Sbjct: 226 LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG 285
Query: 228 HWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISE---LNVVVKTSLIDMYVKSGCI 284
+ + + +L + P+ +C + +++ + +VV ++LI+ + ++
Sbjct: 286 -IQLDAYSYNQLLKRHCRVSHPD--KC-YNFMVKEMEPRGFCDVVSYSTLIETFCRASNT 341
Query: 285 EKGVCVFQNMAEK----SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGV 340
K +F+ M +K + +YT +I G+ + A ++ ++ E GL+PD + Y +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 341 LSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIK- 399
L +G V++ F +M EH+I P Y ++ L R+G + EA L + M K
Sbjct: 402 LDHLCKSGNVDKAYGVFNDM-IEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 400 --PNDVVWRSLL 409
P+++ ++ ++
Sbjct: 461 CCPDELTFKFII 472
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 152/373 (40%), Gaps = 49/373 (13%)
Query: 74 ALAKWGSMEYACSIFRQIE----EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
L + G +E + + ++ +P ++ YNT+I V + G+
Sbjct: 233 GLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVY 292
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
+ Y L++ G + + ++ + + G+ D+ V LIS + G +K A +F
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Query: 190 EKMDEKSVA----SWSAII------GAHACAE---------------------------- 211
+++ EK ++ ++ A+I G AE
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 212 -MWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVV 270
M + M+ M ++G ++A+ T ++ S L + + ++ +L+ V
Sbjct: 413 GMVDEASMIYDVMEQKG-FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVS 471
Query: 271 KTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYTVMISGLSIHGHGAEALQVFSEIL 326
T+LID+Y K G +E+ +F M+ K + +Y VMI G EA ++ + +
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 327 EEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGML 386
G+ PD Y ++ A V+E ++ F M + + +V Y M+ L +AG
Sbjct: 532 ANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT-YTVMISGLSKAGKS 590
Query: 387 REAYGLIKSMPIK 399
EA+GL M K
Sbjct: 591 DEAFGLYDEMKRK 603
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 114/286 (39%), Gaps = 17/286 (5%)
Query: 74 ALAKW----GSMEYACSIFRQIEE----PGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXX 125
+L W G+M+ A +F ++ E P S+ Y +I G +
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK 393
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ ++ L+ G V E I+ + + G D+F N + S + + A
Sbjct: 394 GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Query: 186 CDVFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+M E S S++ +I + + L +MS +G + V + +
Sbjct: 454 KQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA----EK 297
C G R + + N + + TSLI + +++ + +F M ++
Sbjct: 514 YCKQ-GKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQ 572
Query: 298 SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSA 343
+ +YTVMISGLS G EA ++ E+ +G D+ VY ++ +
Sbjct: 573 NSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/480 (20%), Positives = 187/480 (38%), Gaps = 59/480 (12%)
Query: 41 CKS--MEEFKQVHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIE----EP 94
CK ME+ + V + G + D + L++ A + G ME A + + P
Sbjct: 246 CKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS--AYSSKGLMEEAFELMNAMPGKGFSP 303
Query: 95 GSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIH 154
G + YNT+I G G+ PD+ Y LL G V E ++
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 155 GHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVASWSAI----------- 203
+ V D+ + ++S++ + G + A F + E + + I
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 204 ----IGAHACAEMWHQ-CLM----------------LLGDMSREGHWRAEESTLVSVLSA 242
+ + EM Q C M +LG+ + + E + +
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 243 CIHL-GSPNLGRCIHGI-LLRNISE----LNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE 296
I + G LG + + L + + E L+VV +L+D + K G I+ ++ +M
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 297 K----SRFSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNE 352
K + SY+++++ L GH AEA +V+ E++ + + P ++ ++ +G ++
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 353 GLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP-----IKPNDVVWRS 407
G + M E + P Y ++ R + +A+GL+K M + P+ + S
Sbjct: 604 GESFLEKMISEGFV-PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 408 LLSACKVHLNLEIGEIAAEKLFM--LNPNNPGDYLVLANMYARAHKWNDVARIRREMADK 465
+L ++ E+ K+ +NP+ Y + N + + RI EM +
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDR-STYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 15/262 (5%)
Query: 161 GVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEK----SVASWSAIIGAHACAEMWHQC 216
G D +F + LI Y + ++ A + F + K S+ + +A+IG+
Sbjct: 162 GSNDSVF--DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 217 LMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLID 276
+ ++SR G + + V + C +G + + + + ++V +LI
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP-DIVTYNTLIS 278
Query: 277 MYVKSGCIEKGVCVFQNMAEKS----RFSYTVMISGLSIHGHGAEALQVFSEILEEGLAP 332
Y G +E+ + M K ++Y +I+GL HG A +VF+E+L GL+P
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 333 DDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA--- 389
D Y +L G V E + F +M+ + P + + M+ L R+G L +A
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMR-SRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 390 YGLIKSMPIKPNDVVWRSLLSA 411
+ +K + P++V++ L+
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQG 419
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 130/301 (43%), Gaps = 23/301 (7%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ D + ++ C G + E + + + G+ D N L+S++ G I+ A
Sbjct: 335 GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAA 394
Query: 186 CDVFEKMDE----KSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
+ + K+ + + A++ +M + ++ +M R R +E ++ ++
Sbjct: 395 LEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNS-IRIDEHSVPVIMQ 453
Query: 242 ACIHLGSPNLGRCIHGILLRNISELNVVVKTS----LIDMYVKSGCIEKGVCVF---QNM 294
+ N G + L +L+ V+ ++ +ID+Y + G + VF +NM
Sbjct: 454 MYV-----NEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNM 508
Query: 295 AEKSR--FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNE 352
+ + Y VMI +AL +F + +G PD+ Y + + LV+E
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 353 GLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRSLL 409
+ M + KP + Y M+ R G+L +A L ++M +KPN+VV+ SL+
Sbjct: 569 AQRILAEM-LDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Query: 410 S 410
+
Sbjct: 628 N 628
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/424 (19%), Positives = 166/424 (39%), Gaps = 54/424 (12%)
Query: 2 TRTTVLSQTHLLSLPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFFC 61
R + H S + P+ L++ FN L + + + + + +LK G
Sbjct: 281 ARNPIEKSLHFASGSDSSPRKPRLTSTFNT--LIDLYGKAGRLNDAANLFSEMLKSGVPI 338
Query: 62 DSFCGSNLVATCALAKWGSMEYACSIFRQIEE----PGSFEYNTMIRGNVSIMNXXXXXX 117
D+ + ++ TC G + A S+ +++EE P + YN ++ + +
Sbjct: 339 DTVTFNTMIHTCG--THGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALE 396
Query: 118 XXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYG 177
G+ PD + +L V E + + + + D ++ MY
Sbjct: 397 YYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYV 456
Query: 178 KCGAIKHACDVFEKMDEKSVAS---WSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEES 234
G + A +FE+ V S +A+I +A +W
Sbjct: 457 NEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLW--------------------- 495
Query: 235 TLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNM 294
V + + G N+ + +L E NV++K Y K+ EK + +F+ M
Sbjct: 496 ----VEAETVFYGKRNMSGQRNDVL-----EYNVMIKA-----YGKAKLHEKALSLFKGM 541
Query: 295 AEKSRF----SYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLV 350
+ + +Y + L+ EA ++ +E+L+ G P Y ++++ GL+
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 351 NEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMP---IKPNDVVWRS 407
++ + ++ M+ + +KP YG +++ +GM+ EA + M ++ N +V S
Sbjct: 602 SDAVDLYEAME-KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 408 LLSA 411
L+ A
Sbjct: 661 LIKA 664
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 119/306 (38%), Gaps = 8/306 (2%)
Query: 97 FEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGH 156
EYN MI+ G PD Y L + + + V E +I
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 157 VFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDEKSVAS----WSAIIGAHACAEM 212
+ +G +I+ Y + G + A D++E M++ V + ++I A + M
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 213 WHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRNISELNVVVKT 272
+ + M G ++ L S++ A +G R ++ + + +V
Sbjct: 636 VEEAIQYFRMMEEHG-VQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN 694
Query: 273 SLIDMYVKSGCIEKGVCVFQNMAEKSR---FSYTVMISGLSIHGHGAEALQVFSEILEEG 329
S++ + G + + +F + EK S+ M+ G EA++V E+ E G
Sbjct: 695 SMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESG 754
Query: 330 LAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREA 389
L D + V++ + G ++E + F M E K+ + + LL + G+ EA
Sbjct: 755 LLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA 814
Query: 390 YGLIKS 395
+++
Sbjct: 815 VSQLQT 820
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 123/334 (36%), Gaps = 41/334 (12%)
Query: 93 EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQ 152
+PG Y MI V + G+ P+ +Y L+ + G V+E IQ
Sbjct: 582 KPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ 641
Query: 153 IHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEKMDE----------KSVASWSA 202
+ + GV + V LI Y K G ++ A V++KM + S+ S A
Sbjct: 642 YFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCA 701
Query: 203 IIGAHACAEMWHQCLMLLGD-----------------MSREGHWRAEESTLVSVLSACI- 244
+G + AE L G M E AEE +LS C
Sbjct: 702 DLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTS 761
Query: 245 -------HLGSPNLGRC---IHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNM 294
+ L C H +L+ L+ +L + K G + V Q
Sbjct: 762 FNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTA 821
Query: 295 AEKSRFSYTVMISG--LSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNE 352
+++ T I+ S G A AL+ E+ + + Y V+ S +G ++
Sbjct: 822 YNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDM 881
Query: 353 GLQCFKNMQFEHKIKPTVQHYGCMVDLLGRAGML 386
L+ + MQ E ++P + +V + G+AGM+
Sbjct: 882 ALKAYMRMQ-EKGLEPDIVTQAYLVGIYGKAGMV 914
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 15/315 (4%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G PD + L+ E + + + G D+ +I+ K G A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 186 CDVFEKMD----EKSVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLS 241
++ KM+ E V +S +I + L L +M +G R + T S++S
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG-IRPDVFTYSSLIS 283
Query: 242 ACIHLGS-PNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEKSR- 299
+ G + R + +L R I+ NVV SLID + K G + + +F M ++S
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINP-NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 300 ---FSYTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQC 356
+Y +I+G +H EA Q+F+ ++ + PD V Y +++ A V +G++
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 357 FKNMQFEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSACK 413
F++M + TV Y ++ +A A + K M + PN + + +LL
Sbjct: 403 FRDMSRRGLVGNTVT-YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 414 VHLNLEIGEIAAEKL 428
+ LE + E L
Sbjct: 462 KNGKLEKAMVVFEYL 476
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 134/335 (40%), Gaps = 14/335 (4%)
Query: 74 ALAKWGSMEYACSIFRQIE----EPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGP 129
+L K+ ++ A ++F +++ P F Y+++I + I P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 130 DNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVF 189
+ + L+ A + G + E ++ + + + +I N LI+ + + A +F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 190 EKMDEKS----VASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIH 245
M K V +++ +I A+ + L DMSR G T +++
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG-LVGNTVTYTTLIHGFFQ 427
Query: 246 LGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMA----EKSRFS 301
+ + + ++ + N++ +L+D K+G +EK + VF+ + E ++
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 302 YTVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQ 361
Y +M G+ G + +F + +G+ PD + Y ++S GL E F M+
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 362 FEHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM 396
E P Y ++ R G + LIK M
Sbjct: 548 -EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 150/334 (44%), Gaps = 49/334 (14%)
Query: 126 GIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHA 185
G+ + Y L+ G K+G +++ + + GV +++ N +++ K G K A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 186 CDVFEKMDEKSVA----SWSAIIGAHACAEM-WHQCLMLLGDMSREG--HWRAEESTLVS 238
VF++M E+ V+ +++ +IG C EM ++ ++ M +G +TL+
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGG-LCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 239 ----------VLSACIHLGS----PNL--------GRCIHG------ILLRNISELNV-- 268
LS C L S P+L G C G +++ + E +
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 269 --VVKTSLIDMYVKSGCIEKGVCVFQNMAE----KSRFSYTVMISGLSIHGHGAEALQVF 322
V T LID + +S +EK + + +M E +Y+V+I G I G EA ++F
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 323 SEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLLGR 382
++E+ P++V+Y ++ G L+ K M+ E ++ P V Y M+++L +
Sbjct: 467 KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME-EKELAPNVASYRYMIEVLCK 525
Query: 383 AGMLREAYGLIKSM---PIKPNDVVWRSLLSACK 413
+EA L++ M I P+ + SL+S K
Sbjct: 526 ERKSKEAERLVEKMIDSGIDPSTSIL-SLISRAK 558
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 121/556 (21%), Positives = 224/556 (40%), Gaps = 63/556 (11%)
Query: 15 LPSTPPQCSELSTRFNEQGWYPL-LKRCKSMEEFKQVHAHVLKLGFFCDSFCGSN--LVA 71
LP TP + L + Y L L CK ME + + + + +C L A
Sbjct: 67 LP-TPIDFNRLCSAVARTKQYDLVLGFCKGME-LNGIEHDMYTMTIMINCYCRKKKLLFA 124
Query: 72 TCALAKWGSMEYACSIFRQIEEPGSFEYNTMIRGNVSIMNXXXXXXXXXXXXXXGIGPDN 131
L + + Y EP + ++T++ G PD
Sbjct: 125 FSVLGRAWKLGY---------EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 132 FIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDDIFVQNGLISMYGKCGAIKHACDVFEK 191
L+ L G V E + + + + G D +++ K G A D+F K
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 192 MDEK----SVASWSAIIGAHACAEMWHQCLMLLGDMSREGHWRAEESTLVSVLSACIHLG 247
M+E+ SV +S +I + + L L +M +G +A+ T S++ + G
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG-IKADVVTYSSLIGGLCNDG 294
Query: 248 SPNLG-RCIHGILLRNISELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSY 302
+ G + + ++ RNI +VV ++LID++VK G + + ++ M + +Y
Sbjct: 295 KWDDGAKMLREMIGRNIIP-DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 303 TVMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQF 362
+I G EA Q+F ++ +G PD V Y ++++ A V++G++ F+ +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 363 EHKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSM---PIKPNDVVWRSLLSAC----KVH 415
+ I P Y +V ++G L A L + M + P+ V + LL +++
Sbjct: 414 KGLI-PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 416 LNLEIGEIAAEKLFMLNPNNPGDYLVLANMYARAHKWNDVARIRREMADKHL-------- 467
LEI E + L G Y ++ + A K +D + ++DK +
Sbjct: 473 KALEIFEKMQKSRMTL---GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 468 VQTPGF----SMVEAERKVYKFVSQDRSQPEFDTIYN-----------MIHQMEWQLEFE 512
V G S+ EA+ +++ + +D P+ D YN +I +E E +
Sbjct: 530 VMIGGLCKKGSLSEADM-LFRKMKEDGCTPD-DFTYNILIRAHLGGSGLISSVELIEEMK 587
Query: 513 --GYKPDTSQVLLDVD 526
G+ D+S + + +D
Sbjct: 588 VCGFSADSSTIKMVID 603
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 165/408 (40%), Gaps = 49/408 (12%)
Query: 50 VHAHVLKLGFFCDSFCGSNLVATCALAKWGSMEYACSIFRQIEE----PGSFEYNTMIRG 105
V A ++KLG+ D S+L+ +K + A ++ Q+ E P +F + T+I G
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSK--RISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 106 NVSIMNXXXXXXXXXXXXXXGIGPDNFIYPFLLKACSLLGGVKEGIQIHGHVFKAGVGDD 165
G PD Y ++ G + + + + A + +
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 166 IFVQNGLISMYGKCGAIKHACDVFEKMDEK----SVASWSAIIGAHACAEMWHQCLMLLG 221
+ + N +I K ++ A D+F +M+ K +V +++++I W LL
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 222 DM-------------------SREGHWRAEESTLVSVLSACIHLGSPNLGRCIHGILLRN 262
+M +EG E ++ I + I+G + N
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 263 -ISEL--------------NVVVKTSLIDMYVKSGCIEKGVCVFQNMAEK----SRFSYT 303
+ E N+ +LI+ + K +E GV +F+ M+++ + +YT
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 304 VMISGLSIHGHGAEALQVFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFE 363
+I G G A VF +++ + D + Y +L G ++ L FK +Q +
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ-K 496
Query: 364 HKIKPTVQHYGCMVDLLGRAGMLREAYGLIKSMPIKPNDVVWRSLLSA 411
+++ + Y M++ + +AG + EA+ L S+ IKP+ V + +++S
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 22/259 (8%)
Query: 265 ELNVVVKTSLIDMYVKSGCIEKGVCVFQNMAE----KSRFSYTVMISGLSIHGHGAEALQ 320
E ++V +SL++ Y S I V + M E F++T +I GL +H +EA+
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 321 VFSEILEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFKNMQFEHKIKPTVQHYGCMVDLL 380
+ ++++ G PD V Y V++ G ++ L M+ +IK V + ++D L
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME-AARIKANVVIFNTIIDSL 268
Query: 381 GRAGMLREAYGLIKSMP---IKPNDVVWRSLLSA-CKVHLNLEIGEIAAEKL-FMLNPNN 435
+ + A L M I+PN V + SL++ C + + + L +NP N
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP-N 327
Query: 436 PGDYLVLANMYARAHKWNDVARIRREMADKHL--------VQTPGFSM---VEAERKVYK 484
+ L + + + K + ++ EM + + + GF M ++ ++++K
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 485 FVSQDRSQPEFDTIYNMIH 503
F+ P T +I+
Sbjct: 388 FMVSKDCLPNIQTYNTLIN 406