Miyakogusa Predicted Gene
- Lj2g3v1510850.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1510850.2 tr|G7JC33|G7JC33_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g0,26.39,2e-18,PPR,Pentatricopeptide repeat; PENTATRICOPEPTIDE
(PPR) REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAM,CUFF.37322.2
(411 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 9e-59
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 3e-58
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 1e-56
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 1e-55
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 4e-55
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 7e-55
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 1e-54
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 210 1e-54
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 209 2e-54
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 6e-52
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 6e-52
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 201 1e-51
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 199 3e-51
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 5e-51
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 7e-51
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 196 2e-50
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 5e-50
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 9e-50
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 193 2e-49
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 2e-49
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 7e-49
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 191 1e-48
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 191 1e-48
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 9e-48
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 5e-47
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 184 7e-47
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 183 2e-46
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 4e-46
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 4e-46
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 4e-46
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 5e-46
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 7e-46
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 4e-45
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 5e-45
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 3e-44
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 4e-44
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 5e-44
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 174 8e-44
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 8e-44
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 174 9e-44
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 9e-44
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 2e-43
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 3e-43
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 5e-43
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 5e-43
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 171 1e-42
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 170 1e-42
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 170 1e-42
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 170 2e-42
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 169 4e-42
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 5e-42
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 168 5e-42
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 5e-42
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 7e-42
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 7e-42
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 7e-42
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 8e-42
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 5e-41
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 5e-41
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 7e-41
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 9e-41
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 162 3e-40
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 4e-40
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 160 2e-39
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 8e-39
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 1e-38
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 8e-38
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 154 9e-38
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 154 9e-38
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 3e-37
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 152 4e-37
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 8e-37
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 8e-37
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 4e-36
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 8e-36
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 9e-36
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 1e-35
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 4e-35
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 7e-35
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 144 1e-34
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 5e-34
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 6e-34
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 7e-34
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 141 8e-34
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 140 1e-33
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 139 4e-33
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 139 5e-33
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 5e-33
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 7e-33
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 9e-33
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 137 1e-32
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 8e-32
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 128 6e-30
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 6e-29
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 123 3e-28
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 121 1e-27
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 107 2e-23
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 89 5e-18
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 78 1e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 9e-14
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 74 1e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 74 1e-13
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 74 2e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 71 1e-12
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 69 7e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 68 1e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 63 4e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 60 4e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 57 2e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 57 3e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 57 3e-08
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 8e-08
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 1e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 54 3e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 53 4e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 49 4e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 224 bits (571), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 196/355 (55%), Gaps = 5/355 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I + KN + L L M ++ T + +C K H G H LV+SG
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E + L ++L+D Y KC I +AR+VF D V WT++I G++ NG +A LF++
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M G IKPNC T+ SV+S C G + L+ ++H +K G +N V +LV YA C
Sbjct: 334 MKGVEIKPNCVTIASVLSGC-GLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYAKCY 391
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
Q D+ + SEKD + +NS+IS +SQN +AL LF M + +P T+ ++ +
Sbjct: 392 QNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFS 451
Query: 299 ACSSLASLIEGRQVHSLVIKMG--SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN 356
AC+SL SL G +H+ +K+G + +V V +AL+D Y+K GD AR + D KN
Sbjct: 452 ACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ W+ MI GY + G + +LELF+ +L +++ P+ FT+IL+AC H G + +G
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ-KPNESTFTSILSACGHTGMVNEG 565
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 177/323 (54%), Gaps = 4/323 (1%)
Query: 89 VLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM 148
V AL +C + ++ G +IH LV+ DN+ L + L+D YAKC I A KVF +
Sbjct: 144 VFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDI 202
Query: 149 KVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHC 208
+ + V WTS+IAG+ N + +LF M ++ N +T ++I AC + AL
Sbjct: 203 TLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT-KLSALHQG 261
Query: 209 STLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQN 268
H +VK G S+ ++ SL+D Y C I ++ + NE S D +++ +MI Y+ N
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 269 LCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVA 328
+AL LF +M+ + P T+ ++L+ C + +L GR VH L IK+G + VA
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVA 380
Query: 329 SALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTEREL 388
+ALV MY+K +A++V + S K+ V W ++I G++Q+G EAL LF R+ +E +
Sbjct: 381 NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE-SV 439
Query: 389 TPDHIYFTAILTACNHAGFLEKG 411
TP+ + ++ +AC G L G
Sbjct: 440 TPNGVTVASLFSACASLGSLAVG 462
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 162/306 (52%), Gaps = 13/306 (4%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I ++ N S + AL L M + KP+ + + LS C N LG +H ++ G
Sbjct: 315 IVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI 374
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
D +++ALV YAKC+ DA+ VF D V+W S+I+GFS NG +A LF
Sbjct: 375 WDT-NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHR 433
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN--FVICSLVDCYAN 236
M + PN T+ S+ SAC +L S+LHA+ VK GF S+ V +L+D YA
Sbjct: 434 MNSESVTPNGVTVASLFSAC-ASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAK 492
Query: 237 CKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTI 296
C + L+ + EK+TI +++MI Y + + +L+LF EM +K+ P + T +I
Sbjct: 493 CGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSI 552
Query: 297 LNACSSLASLIEGRQVHSLVIKMGSERNVFVASA-----LVDMYSKGGDIDEARFVLDQT 351
L+AC + EG++ S + K + N F S +VDM ++ G++++A ++++
Sbjct: 553 LSACGHTGMVNEGKKYFSSMYK---DYN-FTPSTKHYTCMVDMLARAGELEQALDIIEKM 608
Query: 352 SVKNNV 357
++ +V
Sbjct: 609 PIQPDV 614
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 153/304 (50%), Gaps = 3/304 (0%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
Q H L +G ++ +++ LV Y DAR VF + D W ++ + N
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
+ + L+ ++ + + + + AC +D L + +H +VK N V+
Sbjct: 122 ESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD-LDNGKKIHCQLVKVP-SFDNVVL 179
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
L+D YA C +I + + N+ + ++ + + SMI+ Y +N + L LF MR+
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
++T T++ AC+ L++L +G+ H ++K G E + + ++L+DMY K GDI AR V
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGF 407
++ S + V+WT MI+GY +G EAL LF + + E+ P+ + ++L+ C
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK-MKGVEIKPNCVTIASVLSGCGLIEN 358
Query: 408 LEKG 411
LE G
Sbjct: 359 LELG 362
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ S+N S AL L MN + P+ + + S+CA + +G +HAY V+
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK 471
Query: 116 SGY--EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
G+ ++ + +AL+DFYAKC AR +F ++ + ++W+++I G+ G +
Sbjct: 472 LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSL 531
Query: 174 LLFKEMLGTHIKPNCFTLTSVISAC 198
LF+EML KPN T TS++SAC
Sbjct: 532 ELFEEMLKKQQKPNESTFTSILSAC 556
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+L+ C+++ SL RQ H ++ G ++ +A+ LV +Y G +AR V DQ +
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
LW M+ Y + +E ++L+D LL + D I F+ L AC L+ G
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYD-LLMKHGFRYDDIVFSKALKACTELQDLDNG 161
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 206/376 (54%), Gaps = 23/376 (6%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N IT +S+ +AL L + + L +CA + GLQI+ ++
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
S ++ +++A +D Y KC A+ +A +VF M+ D VSW ++IA NG+G + L
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F ML + I+P+ FT S++ AC G +L + +H+ +VK G +++ V CSL+D Y+
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG--GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528
Query: 236 NCKQIDDSLL--------------------LLNETSEKDTIVYNSMISAYSQNLCSGDAL 275
C I+++ + N+ ++ + +NS+IS Y S DA
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588
Query: 276 QLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMY 335
LF M + +P T T+L+ C++LAS G+Q+H+ VIK + +V++ S LVDMY
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 648
Query: 336 SKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYF 395
SK GD+ ++R + +++ ++ V W MI GYA G+G EA++LF+R++ E + P+H+ F
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN-IKPNHVTF 707
Query: 396 TAILTACNHAGFLEKG 411
+IL AC H G ++KG
Sbjct: 708 ISILRACAHMGLIDKG 723
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 173/347 (49%), Gaps = 2/347 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N ++ + +N + +++++ M R + L C+ + LG+QIH +VR
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 208
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G + ++ +SAL+D YAK V++ +VF+ + + VSW+++IAG N A
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKF 268
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
FKEM + + SV+ +C + L+ LHAH +K F V + +D YA
Sbjct: 269 FKEMQKVNAGVSQSIYASVLRSCAALSE-LRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C + D+ +L + + + YN+MI+ YSQ AL LF + + +L
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSG 387
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+ AC+ + L EG Q++ L IK +V VA+A +DMY K + EA V D+ ++
Sbjct: 388 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 447
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
V W +I + Q+G+G E L LF +L R + PD F +IL AC
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSR-IEPDEFTFGSILKAC 493
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 175/390 (44%), Gaps = 40/390 (10%)
Query: 56 NDCITK---HSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAY 112
N C+T+ + + S D L +N + S + CAK LG Q HA+
Sbjct: 18 NRCLTEKISYRRVPSFSYFTDFLNQVNSV----STTNFSFVFKECAKQGALELGKQAHAH 73
Query: 113 LVRSGYEDNLFLSSALV-------DF------------------------YAKCFAIVDA 141
++ SG+ F+ + L+ DF Y+K + A
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKA 133
Query: 142 RKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQ 201
F M V D VSW S+++G+ NG+ + +F +M I+ + T ++ C
Sbjct: 134 NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFL 193
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSM 261
+D +H VV+ G T +L+D YA K+ +SL + EK+++ ++++
Sbjct: 194 EDT-SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 252
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
I+ QN AL+ F EM++ + ++L +C++L+ L G Q+H+ +K
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 322 ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDR 381
+ V +A +DMY+K ++ +A+ + D + N + MI GY+Q G +AL LF R
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 382 LLTERELTPDHIYFTAILTACNHAGFLEKG 411
L++ L D I + + AC L +G
Sbjct: 373 LMSSG-LGFDEISLSGVFRACALVKGLSEG 401
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 210/357 (58%), Gaps = 9/357 (2%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
IT ++ + RA + M + P++ L + L SC + G +H +V+ G
Sbjct: 83 ITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGM 142
Query: 119 EDNLFLSSALVDFYAKCFAIVDAR-KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
E +L++ +A+++ YA C ++A +FR +KV + V+WT+LI GF+ G G ++K
Sbjct: 143 EGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYK 202
Query: 178 EML--GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
+ML + P C T+ SA + D++ +HA V+KRGF+++ V+ S++D Y
Sbjct: 203 QMLLENAEVTPYCITIAVRASASI---DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYC 259
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C + ++ +E +KD I +N++IS ++ S +AL +F + F P +T +
Sbjct: 260 RCGYLSEAKHYFHEMEDKDLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTS 318
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
++ AC+++A+L G+Q+H + + G +NV +A+AL+DMY+K G+I +++ V + +
Sbjct: 319 LVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRR 378
Query: 356 NVL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
N++ WT+M++GY G G EA+ELFD++++ + PD I F A+L+AC HAG +EKG
Sbjct: 379 NLVSWTSMMIGYGSHGYGAEAVELFDKMVSS-GIRPDRIVFMAVLSACRHAGLVEKG 434
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 154/290 (53%), Gaps = 4/290 (1%)
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
L++ L+ Y + + +AR +F M D V+WT++I G++++ A+ F EM+
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK-QID 241
PN FTL+SV+ +C K L + + +H VVK G S +V ++++ YA C ++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMK-VLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 242 DSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
+ L+ + K+ + + ++I+ ++ L+++ +M + T + + + A +
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTT 361
S+ S+ G+Q+H+ VIK G + N+ V ++++D+Y + G + EA+ + K+ + W T
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 362 MIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+I +S EAL +F R ++ P+ FT+++ AC + L G
Sbjct: 285 LISELERSDSS-EALLMFQRFESQ-GFVPNCYTFTSLVAACANIAALNCG 332
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 5/343 (1%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
+ AL L M KP K +CAK +G +H+ L + G E ++ ++ +L
Sbjct: 114 EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSL 173
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
+ YAKC + ARK+F + D VSW S+I+G+S G +DA LF++M +P+
Sbjct: 174 IMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDE 233
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
TL S++ AC D L+ L + + S F+ L+ Y C +D + + N
Sbjct: 234 RTLVSMLGACSHLGD-LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFN 292
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
+ +KD + + +MI+ YSQN S +A +LF EM + SP TL T+L+AC S+ +L
Sbjct: 293 QMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALEL 352
Query: 309 GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQ 368
G+Q+ + ++ + N++VA+ LVDMY K G ++EA V + VKN W MI YA
Sbjct: 353 GKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAH 412
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
G EAL LFDR+ + P I F +L+AC HAG + +G
Sbjct: 413 QGHAKEALLLFDRM----SVPPSDITFIGVLSACVHAGLVHQG 451
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 160/331 (48%), Gaps = 5/331 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +S+ A+DL M +P + L + L +C+ + G + +
Sbjct: 202 NSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAIT 261
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ FL S L+ Y KC + AR+VF M D+V+WT++I +S NG+ +AF L
Sbjct: 262 KKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKL 321
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F EM T + P+ TL++V+SAC G AL+ + H + + + +V LVD Y
Sbjct: 322 FFEMEKTGVSPDAGTLSTVLSAC-GSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C +++++L + K+ +N+MI+AY+ + +AL LF M P+D T
Sbjct: 381 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIG 437
Query: 296 ILNACSSLASLIEG-RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+L+AC + +G R H + G + + ++D+ S+ G +DEA +++ K
Sbjct: 438 VLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTE 385
+ + I+G + + E R+L E
Sbjct: 498 PDEIMLAAILGACHKRKDVAIREKAMRMLME 528
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 195/362 (53%), Gaps = 38/362 (10%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKC--------- 135
P +V + L SC + G +H ++VR G + +L+ +AL++ YAK
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 136 ---------------------------FAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
F I R+VF M D VS+ ++IAG++ +G
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 169 GRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC 228
DA + +EM T +KP+ FTL+SV+ D ++ +H +V+++G + ++
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK-GKEIHGYVIRKGIDSDVYIGS 281
Query: 229 SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSP 288
SLVD YA +I+DS + + +D I +NS+++ Y QN +AL+LF +M K P
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
+++ AC+ LA+L G+Q+H V++ G N+F+ASALVDMYSK G+I AR +
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 349 DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
D+ +V + V WT +IMG+A G G EA+ LF+ + + + P+ + F A+LTAC+H G +
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE-MKRQGVKPNQVAFVAVLTACSHVGLV 460
Query: 409 EK 410
++
Sbjct: 461 DE 462
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 176/350 (50%), Gaps = 8/350 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++++ + AL ++ M KP L + L ++ + G +IH Y++R
Sbjct: 211 NTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIR 270
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G + ++++ S+LVD YAK I D+ +VF + D +SW SL+AG+ NG+ +A L
Sbjct: 271 KGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRL 330
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F++M+ +KP +SVI AC L LH +V++ GF ++ F+ +LVD Y+
Sbjct: 331 FRQMVTAKVKPGAVAFSSVIPAC-AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C I + + + + D + + ++I ++ + +A+ LF EM+++ P
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 449
Query: 296 ILNACSSLASLIEGRQVHSLVIKM-GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+L ACS + + E + + K+ G + + +A+ D+ + G ++EA + + V+
Sbjct: 450 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVE 509
Query: 355 -NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
+W+T++ S + LEL ++ + E+ T D A + CN
Sbjct: 510 PTGSVWSTLL----SSCSVHKNLELAEK-VAEKIFTVDSENMGAYVLMCN 554
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 37/206 (17%)
Query: 230 LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
++ Y N K + ++LLL + + S+I ++ AL FVEMR P
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK------------ 337
+ ++L +C+ + L G VH ++++G + +++ +AL++MY+K
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 338 -----------GGD-------------IDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGL 373
GD ID R V + K+ V + T+I GYAQSG
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 374 EALELFDRLLTERELTPDHIYFTAIL 399
+AL + R + +L PD +++L
Sbjct: 225 DALRMV-REMGTTDLKPDSFTLSSVL 249
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 212/394 (53%), Gaps = 40/394 (10%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N ++ +++ + AL M++ ++ + LS+C+ + + G+Q+H+ + +
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
S + ++++ SALVD Y+KC + DA++VF M + VSW SLI F NG +A +
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC-SLVDCY 234
F+ ML + ++P+ TL SVISAC A++ +H VVK ++ ++ + VD Y
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLS-AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 235 ANCKQID------DSL-------------------------LLLNETSEKDTIVYNSMIS 263
A C +I DS+ L+ + +E++ + +N++I+
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM---- 319
Y+QN + +AL LF ++++ PT ++ IL AC+ LA L G Q H V+K
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 320 --GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALE 377
G E ++FV ++L+DMY K G ++E V + ++ V W MI+G+AQ+G G EALE
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 378 LFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
LF +L E PDHI +L+AC HAGF+E+G
Sbjct: 480 LFREMLESGE-KPDHITMIGVLSACGHAGFVEEG 512
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 191/386 (49%), Gaps = 66/386 (17%)
Query: 81 LTAKPSKSVLCTALSSCAKARNWHLGLQ-IHAYLVRSGYEDNLFLSSALVDFYAKCFAIV 139
L++ S L SC K++ + ++ +HA +++SG+ + +F+ + L+D Y+KC ++
Sbjct: 13 LSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLE 72
Query: 140 DARKV-------------------------------FRAMKVHDQVSWTSLIAGFSANGQ 168
D R+V FR+M DQ +W S+++GF+ + +
Sbjct: 73 DGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 169 GRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC 228
+A F M N ++ SV+SAC G D + +H+ + K F + ++
Sbjct: 133 CEEALCYFAMMHKEGFVLNEYSFASVLSACSGLND-MNKGVQVHSLIAKSPFLSDVYIGS 191
Query: 229 SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSP 288
+LVD Y+ C ++D+ + +E +++ + +NS+I+ + QN + +AL +F M + + P
Sbjct: 192 ALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEP 251
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN-VFVASALVDMYSKGGDIDEARFV 347
+ TL ++++AC+SL+++ G++VH V+K RN + +++A VDMY+K I EARF+
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 348 LDQTSVKN------------------------------NVL-WTTMIMGYAQSGRGLEAL 376
D ++N NV+ W +I GY Q+G EAL
Sbjct: 312 FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 377 ELFDRLLTERELTPDHIYFTAILTAC 402
LF LL + P H F IL AC
Sbjct: 372 SLF-CLLKRESVCPTHYSFANILKAC 396
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 171/350 (48%), Gaps = 45/350 (12%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N IT +N ALD+ M +P + L + +S+CA +G ++H +V+
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 116 SG-YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ--------------------- 153
+ +++ LS+A VD YAKC I +AR +F +M + +
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 154 ----------VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD 203
VSW +LIAG++ NG+ +A LF + + P ++ +++ AC +
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 204 ALQHCSTLHAHVVKRGFRTSN------FVICSLVDCYANCKQIDDSLLLLNETSEKDTIV 257
L H HV+K GF+ + FV SL+D Y C +++ L+ + E+D +
Sbjct: 402 -LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 258 YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI 317
+N+MI ++QN +AL+LF EM + P T+ +L+AC + EGR S +
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 318 K---MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMI 363
+ + R+ + + +VD+ + G ++EA+ ++++ ++ ++V+W +++
Sbjct: 521 RDFGVAPLRDHY--TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 199/359 (55%), Gaps = 6/359 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + ++ + A DL MN + L + L +C + G Q+H V+
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G + +L S+L+D Y+KC I DARKVF ++ VS +LIAG+S N +A +L
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVL 616
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN-FVICSLVDCY 234
F+EML + P+ T +++ AC + ++L + H + KRGF + ++ SL+ Y
Sbjct: 617 FQEMLTRGVNPSEITFATIVEAC-HKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 235 ANCKQIDDSLLLLNE-TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
N + + ++ L +E +S K +++ M+S +SQN +AL+ + EMR P T
Sbjct: 676 MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATF 735
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
T+L CS L+SL EGR +HSL+ + + + ++ L+DMY+K GD+ + V D+
Sbjct: 736 VTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR 795
Query: 354 KNNVL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++NV+ W ++I GYA++G +AL++FD + + + PD I F +LTAC+HAG + G
Sbjct: 796 RSNVVSWNSLINGYAKNGYAEDALKIFDS-MRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 185/356 (51%), Gaps = 3/356 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ H K A++ M + + K ++S L + LS+ N LGL +HA ++
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G N+++ S+LV Y+KC + A KVF A++ + V W ++I G++ NG+ L
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F +M + + FT TS++S C D L+ S H+ ++K+ + FV +LVD YA
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHD-LEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C ++D+ + ++D + +N++I +Y Q+ +A LF M L +
Sbjct: 475 KCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAS 534
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
L AC+ + L +G+QVH L +K G +R++ S+L+DMYSK G I +AR V +
Sbjct: 535 TLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS 594
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V +I GY+Q+ EA+ LF +LT R + P I F I+ AC+ L G
Sbjct: 595 VVSMNALIAGYSQNNLE-EAVVLFQEMLT-RGVNPSEITFATIVEACHKPESLTLG 648
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 183/393 (46%), Gaps = 68/393 (17%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P+K LS+CA+ N G QIH +++ G E N + ALVD YAKC I DAR+V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 145 FRAMKVHDQVSWTSLIAGFSANG--------------QG--------------------- 169
F + + V WT L +G+ G +G
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 170 RDAFLLFKEM-----------LGTHIKPNC--------------------FTLTSVISAC 198
+DA LLF EM + H K C TL SV+SA
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA- 336
Query: 199 VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVY 258
+G L +HA +K G ++ +V SLV Y+ C++++ + + EK+ + +
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 259 NSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK 318
N+MI Y+ N S ++LF++M+ ++ D T ++L+ C++ L G Q HS++IK
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 319 MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
+N+FV +ALVDMY+K G +++AR + ++ ++NV W T+I Y Q EA +L
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 379 FDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
F R + + D + L AC H L +G
Sbjct: 517 FKR-MNLCGIVSDGACLASTLKACTHVHGLYQG 548
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 175/361 (48%), Gaps = 5/361 (1%)
Query: 53 TFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAY 112
F N I ++ N + + ++L M + LS+CA + + +G Q H+
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 113 LVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDA 172
+++ NLF+ +ALVD YAKC A+ DAR++F M D V+W ++I + + +A
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 173 FLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD 232
F LFK M I + L S + AC L +H VK G SL+D
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACT-HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLID 572
Query: 233 CYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
Y+ C I D+ + + E + N++I+ YSQN +A+ LF EM + +P++ T
Sbjct: 573 MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEIT 631
Query: 293 LCTILNACSSLASLIEGRQVHSLVIKMG-SERNVFVASALVDMYSKGGDIDEARFVLDQ- 350
TI+ AC SL G Q H + K G S ++ +L+ MY + EA + +
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL 691
Query: 351 TSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
+S K+ VLWT M+ G++Q+G EAL+ + + + L PD F +L C+ L +
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL-PDQATFVTVLRVCSVLSSLRE 750
Query: 411 G 411
G
Sbjct: 751 G 751
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 151/313 (48%), Gaps = 7/313 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I +S+N + + A+ L M PS+ T + +C K + LG Q H + +
Sbjct: 599 NALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK 657
Query: 116 SGYE-DNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ-VSWTSLIAGFSANGQGRDAF 173
G+ + +L +L+ Y + +A +F + V WT +++G S NG +A
Sbjct: 658 RGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEAL 717
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
+KEM + P+ T +V+ C +L+ +H+ + +L+D
Sbjct: 718 KFYKEMRHDGVLPDQATFVTVLRVC-SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDM 776
Query: 234 YANCKQIDDSLLLLNETSEKDTIV-YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
YA C + S + +E + +V +NS+I+ Y++N + DAL++F MRQ P + T
Sbjct: 777 YAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEIT 836
Query: 293 LCTILNACSSLASLIEGRQVHSLVI-KMGSERNVFVASALVDMYSKGGDIDEARFVLDQT 351
+L ACS + +GR++ ++I + G E V + +VD+ + G + EA ++
Sbjct: 837 FLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQ 896
Query: 352 SVKNNV-LWTTMI 363
++K + LW++++
Sbjct: 897 NLKPDARLWSSLL 909
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 2/206 (0%)
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
AL+ +H+ + G + + ++VD YA C Q+ + + EKD +NSM+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
YS G L+ FV + + + P T +L+ C+ ++ GRQ+H +IKMG ER
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
N + ALVDMY+K I +AR V + N V WT + GY ++G EA+ +F+R+
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 384 TERELTPDHIYFTAILTACNHAGFLE 409
E PDH+ F ++ G L+
Sbjct: 254 DEGH-RPDHLAFVTVINTYIRLGKLK 278
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFS 164
+G +H+ + G + L +A+VD YAKC + A K F ++ D +W S+++ +S
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYS 136
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
+ G+ F + I PN FT + V+S C + + ++ +H ++K G ++
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETN-VEFGRQIHCSMIKMGLERNS 195
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
+ +LVD YA C +I D+ + + +T+ + + S Y + +A+ +F MR +
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
P T++N Y + G + +A
Sbjct: 256 GHRPDHLAFVTVINT-----------------------------------YIRLGKLKDA 280
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELF 379
R + + S + V W MI G+ + G A+E F
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 211 bits (537), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 202/356 (56%), Gaps = 5/356 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
++ + +NA A++L T M++ KP + L+SCA G Q+HAY +++
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL 381
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG---QGRDAFLL 175
++ +++++L+D YAKC + DARKVF D V + ++I G+S G + +A +
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNI 441
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F++M I+P+ T S++ A +L +H + K G F +L+D Y+
Sbjct: 442 FRDMRFRLIRPSLLTFVSLLRASASLT-SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYS 500
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
NC + DS L+ +E KD +++NSM + Y Q + +AL LF+E++ + P + T
Sbjct: 501 NCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFAN 560
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
++ A +LAS+ G++ H ++K G E N ++ +AL+DMY+K G ++A D + ++
Sbjct: 561 MVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRD 620
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V W ++I YA G G +AL++ +++++E + P++I F +L+AC+HAG +E G
Sbjct: 621 VVCWNSVISSYANHGEGKKALQMLEKMMSE-GIEPNYITFVGVLSACSHAGLVEDG 675
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 177/322 (54%), Gaps = 7/322 (2%)
Query: 85 PSKSVLCTALSSCA--KARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDAR 142
P++ +L + + +C+ R + Q+ ++LV+SG++ ++++ + L+DFY K I AR
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 143 KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK 202
VF A+ V+WT++I+G G+ + LF +++ ++ P+ + L++V+SAC
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSAC-SIL 262
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
L+ +HAH+++ G ++ L+D Y C ++ + L N K+ I + +++
Sbjct: 263 PFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLL 322
Query: 263 SAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE 322
S Y QN +A++LF M + P + +IL +C+SL +L G QVH+ IK
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG 382
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGL---EALELF 379
+ +V ++L+DMY+K + +AR V D + + VL+ MI GY++ G EAL +F
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 380 DRLLTERELTPDHIYFTAILTA 401
R + R + P + F ++L A
Sbjct: 443 -RDMRFRLIRPSLLTFVSLLRA 463
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 159/296 (53%), Gaps = 3/296 (1%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
+H ++ G E + +LS+ L++ Y++ +V ARKVF M + VSW+++++ + +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 169 GRDAFLLFKEMLGTHI-KPNCFTLTSVISACVG-QKDALQHCSTLHAHVVKRGFRTSNFV 226
++ ++F E T PN + L+S I AC G L + +VK GF +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 227 ICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
L+D Y ID + L+ + EK T+ + +MIS + S +LQLF ++ +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARF 346
P + L T+L+ACS L L G+Q+H+ +++ G E + + + L+D Y K G + A
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 347 VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
+ + KN + WTT++ GY Q+ EA+ELF +++ L PD ++ILT+C
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS-MSKFGLKPDMYACSSILTSC 360
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 156/302 (51%), Gaps = 2/302 (0%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
AL++ M +PS + L + A + L QIH + + G ++F SAL+
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI 496
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
D Y+ C+ + D+R VF MKV D V W S+ AG+ + +A LF E+ + +P+ F
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEF 556
Query: 190 TLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
T ++++A G ++Q H ++KRG + ++ +L+D YA C +D+ +
Sbjct: 557 TFANMVTAA-GNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDS 615
Query: 250 TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEG 309
+ +D + +NS+IS+Y+ + ALQ+ +M + P T +L+ACS + +G
Sbjct: 616 AASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG 675
Query: 310 RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN-NVLWTTMIMGYAQ 368
+ L+++ G E +V + + G +++AR ++++ K ++W +++ G A+
Sbjct: 676 LKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAK 735
Query: 369 SG 370
+G
Sbjct: 736 AG 737
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 118/214 (55%), Gaps = 8/214 (3%)
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
D L + + +H ++ G ++ L++ Y+ + + + + E++ + +++M+
Sbjct: 58 DLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMV 117
Query: 263 SAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGR----QVHSLVI 317
SA + + ++L +F+E R +K SP ++ L + + ACS L GR Q+ S ++
Sbjct: 118 SACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLV 175
Query: 318 KMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALE 377
K G +R+V+V + L+D Y K G+ID AR V D K+ V WTTMI G + GR +L+
Sbjct: 176 KSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235
Query: 378 LFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
LF +L+ E + PD + +L+AC+ FLE G
Sbjct: 236 LFYQLM-EDNVVPDGYILSTVLSACSILPFLEGG 268
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 36/302 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + + + + AL+L + +P + +++ + LG + H L++
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK 583
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G E N ++++AL+D YAKC + DA K F + D V W S+I+ ++ +G+G+ A +
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQM 643
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
++M+ I+PN T V+SAC HA +V+ G
Sbjct: 644 LEKMMSEGIEPNYITFVGVLSACS------------HAGLVEDGL--------------- 676
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
KQ + L+L E +T Y M+S + A +L +M K P +
Sbjct: 677 --KQFE---LMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK---PAAIVWRS 728
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+L+ C+ ++ + I + ++ + L ++Y+ G EA+ V ++ V+
Sbjct: 729 LLSGCAKAGNVELAEHAAEMAI-LSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
Query: 356 NV 357
V
Sbjct: 788 VV 789
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 185/326 (56%), Gaps = 2/326 (0%)
Query: 86 SKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVF 145
S V LSS A LG QIH +++G + LS+ALV Y+KC ++ +A K+F
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMF 279
Query: 146 RAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDAL 205
+ + ++W++++ G+S NG+ +A LF M IKP+ +T+ V++AC L
Sbjct: 280 DSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC-SDICYL 338
Query: 206 QHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAY 265
+ LH+ ++K GF F +LVD YA + D+ + E+D ++ S+IS Y
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 266 SQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNV 325
QN + +AL L+ M+ P D T+ ++L ACSSLA+L G+QVH IK G V
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV 458
Query: 326 FVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTE 385
+ SAL MYSK G +++ V +T K+ V W MI G + +G+G EALELF+ +L E
Sbjct: 459 PIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAE 518
Query: 386 RELTPDHIYFTAILTACNHAGFLEKG 411
+ PD + F I++AC+H GF+E+G
Sbjct: 519 G-MEPDDVTFVNIISACSHKGFVERG 543
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 180/335 (53%), Gaps = 13/335 (3%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P S L L+ ++ RN G +H ++R+G + ++ LV+FYAKC + A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFL---LFKEMLGTHIKPNCFTLTSVISACVGQ 201
F A+ D VSW SLI G+S NG ++ LF+EM I PN +TL + A
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA---- 127
Query: 202 KDALQHCST---LHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVY 258
+ +LQ + HA VVK +V SLV Y ++D L + E++T +
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 259 NSMISAYSQNLCSGDALQLF-VEMRQK-KFSPTDHTLCTILNACSSLASLIEGRQVHSLV 316
++M+S Y+ +A+++F + +R+K + S +D+ +L++ ++ + GRQ+H +
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 317 IKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEAL 376
IK G V +++ALV MYSK ++EA + D + +N++ W+ M+ GY+Q+G LEA+
Sbjct: 248 IKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAV 307
Query: 377 ELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+LF R+ + + P +L AC+ +LE+G
Sbjct: 308 KLFSRMFSAG-IKPSEYTIVGVLNACSDICYLEEG 341
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 196/366 (53%), Gaps = 17/366 (4%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAK---PSKSVLCTALSSCAKARNWHLGLQIHAY 112
N IT +S+N + ++ + A+ P+ L + + ++ +G Q HA
Sbjct: 84 NSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHAL 143
Query: 113 LVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDA 172
+V+ ++++ ++LV Y K + D KVF M + +W+++++G++ G+ +A
Sbjct: 144 VVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEA 203
Query: 173 FLLFKEMLGTHIK--PNCFTLTSVISAC-----VGQKDALQHCSTLHAHVVKRGFRTSNF 225
+F L + + + T+V+S+ VG + HC T +K G
Sbjct: 204 IKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI-HCIT-----IKNGLLGFVA 257
Query: 226 VICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKK 285
+ +LV Y+ C+ ++++ + + + ++++I +++M++ YSQN S +A++LF M
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
P+++T+ +LNACS + L EG+Q+HS ++K+G ER++F +ALVDMY+K G + +AR
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
D ++ LWT++I GY Q+ EAL L+ R+ T + P+ ++L AC+
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAG-IIPNDPTMASVLKACSSL 436
Query: 406 GFLEKG 411
LE G
Sbjct: 437 ATLELG 442
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 179/347 (51%), Gaps = 6/347 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
+T +S+N + A+ L + M KPS+ + L++C+ G Q+H++L++ G+
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E +LF ++ALVD YAK + DARK F ++ D WTSLI+G+ N +A +L++
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M I PN T+ SV+ AC L+ +H H +K GF + +L Y+ C
Sbjct: 414 MKTAGIIPNDPTMASVLKAC-SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCG 472
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
++D L+ T KD + +N+MIS S N +AL+LF EM + P D T I++
Sbjct: 473 SLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIIS 532
Query: 299 ACSSLASLIEGRQVHSLVI-KMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
ACS + G +++ ++G + V + +VD+ S+ G + EA+ ++ ++ + +
Sbjct: 533 ACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGL 592
Query: 358 -LWTTMIMGYAQSGRGLEALELFDRL--LTERELTPDHIYFTAILTA 401
LW ++ G+ + ++L L RE + ++ + I TA
Sbjct: 593 CLWRILLSACKNHGKCELGVYAGEKLMALGSRE-SSTYVQLSGIYTA 638
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 283 QKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDID 342
Q + +P TL L S +L+ GR VH +I+ G+ + A+ LV+ Y+K G +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 343 EARFVLDQTSVKNNVLWTTMIMGYAQSG---RGLEALELFDRLLTERELTPDHIYFTAIL 399
+A + + K+ V W ++I GY+Q+G ++LF R + +++ P+ I
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLF-REMRAQDILPNAYTLAGIF 125
Query: 400 TA 401
A
Sbjct: 126 KA 127
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 195/356 (54%), Gaps = 2/356 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + +S+N AL+++ M KPS + + L + + R +G +IH Y +R
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
SG++ + +S+ALVD YAKC ++ AR++F M + VSW S+I + N ++A L+
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLI 324
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F++ML +KP ++ + AC D L+ +H V+ G + V+ SL+ Y
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGD-LERGRFIHKLSVELGLDRNVSVVNSLISMYC 383
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
CK++D + + + + + +N+MI ++QN DAL F +MR + P T +
Sbjct: 384 KCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
++ A + L+ + +H +V++ ++NVFV +ALVDMY+K G I AR + D S ++
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH 503
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W MI GY G G ALELF+ + + + P+ + F ++++AC+H+G +E G
Sbjct: 504 VTTWNAMIDGYGTHGFGKAALELFEE-MQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 184/339 (54%), Gaps = 2/339 (0%)
Query: 63 SKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNL 122
+K + D+AL M +P L C +G +IH LV+SG+ +L
Sbjct: 111 AKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDL 170
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
F + L + YAKC + +ARKVF M D VSW +++AG+S NG R A + K M
Sbjct: 171 FAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE 230
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
++KP+ T+ SV+ A V + +H + ++ GF + + +LVD YA C ++
Sbjct: 231 NLKPSFITIVSVLPA-VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET 289
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
+ L + E++ + +NSMI AY QN +A+ +F +M + PTD ++ L+AC+
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTM 362
L L GR +H L +++G +RNV V ++L+ MY K ++D A + + + V W M
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409
Query: 363 IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
I+G+AQ+GR ++AL F ++ + R + PD + +++TA
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITA 447
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 157/304 (51%), Gaps = 2/304 (0%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
QI + ++G F + LV + + ++ +A +VF + V + +++ GF+
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
A F M ++P + T ++ C G + L+ +H +VK GF F +
Sbjct: 115 DLDKALQFFVRMRYDDVEPVVYNFTYLLKVC-GDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
L + YA C+Q++++ + + E+D + +N++++ YSQN + AL++ M ++
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P+ T+ ++L A S+L + G+++H ++ G + V +++ALVDMY+K G ++ AR +
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGF 407
D +N V W +MI Y Q+ EA+ +F ++L E + P + L AC G
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE-GVKPTDVSVMGALHACADLGD 352
Query: 408 LEKG 411
LE+G
Sbjct: 353 LERG 356
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 205 LQHCSTLH------AHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVY 258
L+ CS+L V K G +F LV + +D++ + K ++Y
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 259 NSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK 318
++M+ +++ ALQ FV MR P + +L C A L G+++H L++K
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 319 MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
G ++F + L +MY+K ++EAR V D+ ++ V W T++ GY+Q+G ALE+
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 379 FDRLLTERELTPDHIYFTAILTA 401
+ + E L P I ++L A
Sbjct: 224 V-KSMCEENLKPSFITIVSVLPA 245
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 206/375 (54%), Gaps = 5/375 (1%)
Query: 40 LCRQFFIKKFSGKTFE-NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCA 98
RQ F + F N I +S+N AL + + M P L +C+
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 99 KARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ--VSW 156
+ +G +HA + R G++ ++F+ + L+ YAKC + AR VF + + ++ VSW
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 157 TSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVV 216
T++++ ++ NG+ +A +F +M +KP+ L SV++A +D L+ ++HA VV
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD-LKQGRSIHASVV 249
Query: 217 KRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQ 276
K G ++ SL YA C Q+ + +L ++ + I++N+MIS Y++N + +A+
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 277 LFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYS 336
+F EM K P ++ + ++AC+ + SL + R ++ V + +VF++SAL+DM++
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 337 KGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFT 396
K G ++ AR V D+T ++ V+W+ MI+GY GR EA+ L+ R + + P+ + F
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY-RAMERGGVHPNDVTFL 428
Query: 397 AILTACNHAGFLEKG 411
+L ACNH+G + +G
Sbjct: 429 GLLMACNHSGMVREG 443
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 163/305 (53%), Gaps = 4/305 (1%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
QIHA L+ G + + FL + L+ + I AR+VF + W ++I G+S N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
+DA L++ M + P+ FT ++ AC G LQ +HA V + GF FV
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH-LQMGRFVHAQVFRLGFDADVFVQ 157
Query: 228 CSLVDCYANCKQIDDSLLLLN--ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKK 285
L+ YA C+++ + + E+ + + +++SAY+QN +AL++F +MR+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
P L ++LNA + L L +GR +H+ V+KMG E + +L MY+K G + A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
+ D+ N +LW MI GYA++G EA+++F ++ +++ PD I T+ ++AC
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN-KDVRPDTISITSAISACAQV 336
Query: 406 GFLEK 410
G LE+
Sbjct: 337 GSLEQ 341
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
+D +++++ + A L +Q+H+ ++ +G + + F+ + L+ S GDI AR V
Sbjct: 20 SDSFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 349 DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
D W +I GY+++ +AL ++ + R ++PD F +L AC+ L
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHL 135
Query: 409 EKG 411
+ G
Sbjct: 136 QMG 138
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 201/406 (49%), Gaps = 54/406 (13%)
Query: 56 NDCITKHSKNASTDRALDLLTGM-NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I ++K AL++ + M N +P L L CA LG Q+H + V
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
S N+F+ + LVD YAKC + +A VF M V D VSW +++AG+S G+ DA
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 175 LF-----------------------------------KEMLGTHIKPNCFTLTSVISACV 199
LF ++ML + IKPN TL SV+S C
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC- 375
Query: 200 GQKDALQHCSTLHAHVVK-------RGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS- 251
AL H +H + +K G N VI L+D YA CK++D + + + S
Sbjct: 376 ASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP 435
Query: 252 -EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK--KFSPTDHTLCTILNACSSLASLIE 308
E+D + + MI YSQ+ + AL+L EM ++ + P T+ L AC+SLA+L
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
Query: 309 GRQVHSLVIKMGSERN---VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMG 365
G+Q+H+ ++ +++N +FV++ L+DMY+K G I +AR V D KN V WT+++ G
Sbjct: 496 GKQIHAYALR--NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTG 553
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
Y G G EAL +FD + D + +L AC+H+G +++G
Sbjct: 554 YGMHGYGEEALGIFDE-MRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 190/432 (43%), Gaps = 65/432 (15%)
Query: 28 LHAFPVSDAKNFLCRQFFIKKFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSK 87
L FP SDA G N I + N ++ L L M+ L+ P
Sbjct: 82 LRRFPPSDA--------------GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDN 127
Query: 88 SVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRA 147
+C + + G HA + +G+ N+F+ +ALV Y++C ++ DARKVF
Sbjct: 128 YTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDE 187
Query: 148 MKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH-IKPNCFTLTSVISAC--VGQKDA 204
M V D VSW S+I ++ G+ + A +F M +P+ TL +V+ C +G
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
+ LH V + FV LVD YA C +D++ + + S KD + +N+M++
Sbjct: 248 GKQ---LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 265 YSQNLCSGDALQLFVEMRQKK-----------------------------------FSPT 289
YSQ DA++LF +M+++K P
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKM-------GSERNVFVASALVDMYSKGGDID 342
+ TL ++L+ C+S+ +L+ G+++H IK G V + L+DMY+K +D
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 343 EARFVLDQTSVKNN--VLWTTMIMGYAQSGRGLEALELFDRLLTER-ELTPDHIYFTAIL 399
AR + D S K V WT MI GY+Q G +ALEL + E + P+ + L
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 400 TACNHAGFLEKG 411
AC L G
Sbjct: 485 VACASLAALRIG 496
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 149/330 (45%), Gaps = 37/330 (11%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAY------ 112
I+ +++ AL + M KP++ L + LS CA G +IH Y
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 113 -LVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM--KVHDQVSWTSLIAGFSANGQG 169
L ++G+ D + + L+D YAKC + AR +F ++ K D V+WT +I G+S +G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 170 RDAFLLFKEMLGT--HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN-FV 226
A L EM +PN FT++ + AC AL+ +HA+ ++ FV
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLA-ALRIGKQIHAYALRNQQNAVPLFV 515
Query: 227 ICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
L+D YA C I D+ L+ + K+ + + S+++ Y + +AL +F EMR+ F
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE-----RNVFVASA-------LVDM 334
TL +L ACS HS +I G E + VF S LVD+
Sbjct: 576 KLDGVTLLVVLYACS-----------HSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 335 YSKGGDIDEA-RFVLDQTSVKNNVLWTTMI 363
+ G ++ A R + + V+W +
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPVVWVAFL 654
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 3/198 (1%)
Query: 211 LHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVY--NSMISAYSQN 268
+H ++ G T N L+ Y + + ++ LL D VY NS+I +Y N
Sbjct: 47 IHQKLLSFGILTLNLT-SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 269 LCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVA 328
C+ L LF M ++P ++T + AC ++S+ G H+L + G NVFV
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 329 SALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTEREL 388
+ALV MYS+ + +AR V D+ SV + V W ++I YA+ G+ ALE+F R+ E
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 389 TPDHIYFTAILTACNHAG 406
PD+I +L C G
Sbjct: 226 RPDNITLVNVLPPCASLG 243
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 197/355 (55%), Gaps = 3/355 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLT-AKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG 117
++ KN S +A++ M + P + L T +S+C K N LG +H +++R G
Sbjct: 134 VSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG 193
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
+ ++L L ++L++ YAK A +A +F+ + D +SW+++IA + NG +A L+F
Sbjct: 194 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFN 253
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
+M+ +PN T+ V+ AC D L+ H +++G T V +LVD Y C
Sbjct: 254 DMMDDGTEPNVATVLCVLQACAAAHD-LEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF-VEMRQKKFSPTDHTLCTI 296
+++ + + KD + + ++IS ++ N + +++ F + + + P + +
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 297 LNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN 356
L +CS L L + + HS VIK G + N F+ ++LV++YS+ G + A V + ++K+
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDT 432
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V+WT++I GY G+G +ALE F+ ++ E+ P+ + F +IL+AC+HAG + +G
Sbjct: 433 VVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 196/373 (52%), Gaps = 6/373 (1%)
Query: 42 RQFFIKKFSGKTFENDCITKH-SKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKA 100
RQ F + ++ + + K S+ + L + M R KP L AL +C +
Sbjct: 14 RQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGEL 73
Query: 101 RNWHLGLQIHAYLVRS-GYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSL 159
R + G IH ++ + +L++ S+L+ Y KC +++A ++F ++ D V+W+S+
Sbjct: 74 REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSM 133
Query: 160 IAGFSANGQGRDAFLLFKEM-LGTHIKPNCFTLTSVISACVGQKDA-LQHCSTLHAHVVK 217
++GF NG A F+ M + + + P+ TL +++SAC ++ L C +H V++
Sbjct: 134 VSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC--VHGFVIR 191
Query: 218 RGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQL 277
RGF ++ SL++CYA + +++ L +EKD I ++++I+ Y QN + +AL +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 278 FVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK 337
F +M P T+ +L AC++ L +GR+ H L I+ G E V V++ALVDMY K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 338 GGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTA 397
+EA V + K+ V W +I G+ +G ++E F +L E PD I
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 398 ILTACNHAGFLEK 410
+L +C+ GFLE+
Sbjct: 372 VLGSCSELGFLEQ 384
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 4/275 (1%)
Query: 139 VDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC 198
VDAR++F M W +L+ S Q + F M KP+ FTL + AC
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 199 VGQKDALQHCSTLHAHVVKRGFRTSN-FVICSLVDCYANCKQIDDSLLLLNETSEKDTIV 257
G+ + + +H V K S+ +V SL+ Y C ++ ++L + +E + D +
Sbjct: 71 -GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 258 YNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLV 316
++SM+S + +N A++ F M +P TL T+++AC+ L++ GR VH V
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 317 IKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEAL 376
I+ G ++ + ++L++ Y+K EA + + K+ + W+T+I Y Q+G EAL
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 377 ELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+F+ ++ + P+ +L AC A LE+G
Sbjct: 250 LVFNDMMDDGT-EPNVATVLCVLQACAAAHDLEQG 283
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 184/345 (53%), Gaps = 2/345 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ S+ +A+ + GM P++ +C+ L +C++ + G Q+H+ +V+
Sbjct: 256 ISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMI 315
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ ++F+ ++L+D YAKC I D RKVF M + V+WTS+IA + G G +A LF+
Sbjct: 316 KTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRI 375
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M H+ N T+ S++ AC G AL LHA ++K + ++ +LV Y C
Sbjct: 376 MKRRHLIANNLTVVSILRAC-GSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCG 434
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+ D+ +L + +D + + +MIS S +AL EM Q+ P T + L
Sbjct: 435 ESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALK 494
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
AC++ SL+ GR +HS+ K + NVFV SAL+ MY+K G + EA V D KN V
Sbjct: 495 ACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVS 554
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
W MIMGYA++G EAL+L R+ E D+I F IL+ C
Sbjct: 555 WKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI-FATILSTCG 598
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 178/309 (57%), Gaps = 3/309 (0%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
L+ C++ + LG Q+H +V+ G NL + S+LV FYA+C + A + F M+ D
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDV 249
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
+SWT++I+ S G G A +F ML PN FT+ S++ AC +K AL+ +H+
Sbjct: 250 ISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK-ALRFGRQVHS 308
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
VVKR +T FV SL+D YA C +I D + + S ++T+ + S+I+A+++ +
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 274 ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVD 333
A+ LF M+++ + T+ +IL AC S+ +L+ G+++H+ +IK E+NV++ S LV
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 334 MYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHI 393
+Y K G+ +A VL Q ++ V WT MI G + G EAL+ ++ E + P+
Sbjct: 429 LYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE-GVEPNPF 487
Query: 394 YFTAILTAC 402
+++ L AC
Sbjct: 488 TYSSALKAC 496
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 170/306 (55%), Gaps = 6/306 (1%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
+IHA ++ + ++ + L+ + +V ARKVF +M + V+WT++I G+ G
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 168 QGRDAFLLFKEMLGTHIK-PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFV 226
+AF LF++ + I+ N +++ C ++ + +H ++VK G N +
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLC-SRRAEFELGRQVHGNMVKVG--VGNLI 219
Query: 227 I-CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKK 285
+ SLV YA C ++ +L + EKD I + ++ISA S+ A+ +F+ M
Sbjct: 220 VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
F P + T+C+IL ACS +L GRQVHSLV+K + +VFV ++L+DMY+K G+I + R
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
V D S +N V WT++I +A+ G G EA+ LF R++ R L +++ +IL AC
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLF-RIMKRRHLIANNLTVVSILRACGSV 398
Query: 406 GFLEKG 411
G L G
Sbjct: 399 GALLLG 404
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 3/246 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I H++ + A+ L M R + + + L +C LG ++HA ++++
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E N+++ S LV Y KC DA V + + D VSWT++I+G S+ G +A KE
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN-FVICSLVDCYANC 237
M+ ++PN FT +S + AC ++L ++H+ + K+ SN FV +L+ YA C
Sbjct: 477 MIQEGVEPNPFTYSSALKAC-ANSESLLIGRSIHS-IAKKNHALSNVFVGSALIHMYAKC 534
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+ ++ + + EK+ + + +MI Y++N +AL+L M + F D+ TIL
Sbjct: 535 GFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATIL 594
Query: 298 NACSSL 303
+ C +
Sbjct: 595 STCGDI 600
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 310 RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQS 369
+++H++ +K ++ ++ + L+ + GD+ AR V D KN V WT MI GY +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 370 GRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
G EA LF+ + + F +L C+ E G
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELG 203
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 204/384 (53%), Gaps = 17/384 (4%)
Query: 43 QFFIKKFSGKTF--ENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKA 100
+ + F G+ N ++ +N AL+ L M +P + + + L +C+
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 101 RNWHLGLQIHAYLVRSG-YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSL 159
G ++HAY +++G ++N F+ SALVD Y C ++ R+VF M W ++
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 160 IAGFSANGQGRDAFLLFKEMLGT-HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKR 218
IAG+S N ++A LLF M + + N T+ V+ ACV + A +H VVKR
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV-RSGAFSRKEAIHGFVVKR 434
Query: 219 GFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF 278
G FV +L+D Y+ +ID ++ + + ++D + +N+MI+ Y + DAL L
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 279 VEMR--QKKFS---------PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
+M+ ++K S P TL TIL +C++L++L +G+++H+ IK +V V
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 328 ASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERE 387
SALVDMY+K G + +R V DQ KN + W +IM Y G G EA++L R++ +
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLL-RMMMVQG 613
Query: 388 LTPDHIYFTAILTACNHAGFLEKG 411
+ P+ + F ++ AC+H+G +++G
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEG 637
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 194/405 (47%), Gaps = 15/405 (3%)
Query: 16 PSGSLRLPDLRHLHAF-----PVSDAKNFL-----CRQFFIKKFSGKTFENDCITKHSKN 65
P S LP RH H + P S ++ FI + + D + ++
Sbjct: 16 PFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRS 75
Query: 66 ASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYE-DNLFL 124
A+ M L KP L + A ++ LG QIHA++ + GY D++ +
Sbjct: 76 NLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTV 135
Query: 125 SSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
++ LV+ Y KC KVF + +QVSW SLI+ + + A F+ ML ++
Sbjct: 136 ANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV 195
Query: 185 KPNCFTLTSVISAC--VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
+P+ FTL SV++AC + + L +HA+ +++G ++F+I +LV Y ++
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLAS 254
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
S +LL +D + +N+++S+ QN +AL+ EM + P + T+ ++L ACS
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 303 LASLIEGRQVHSLVIKMGS-ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTT 361
L L G+++H+ +K GS + N FV SALVDMY + R V D + LW
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNA 374
Query: 362 MIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
MI GY+Q+ EAL LF + L + ++ AC +G
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 143/317 (45%), Gaps = 15/317 (4%)
Query: 42 RQFFIKKFSGKT-FENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSV-LCTALSSCAK 99
R+ F F K N I +S+N AL L GM + S + + +C +
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 100 ARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSL 159
+ + IH ++V+ G + + F+ + L+D Y++ I A ++F M+ D V+W ++
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 160 IAGFSANGQGRDAFLLFKEMLG-----------THIKPNCFTLTSVISACVGQKDALQHC 208
I G+ + DA LL +M +KPN TL +++ +C AL
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL-SALAKG 536
Query: 209 STLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQN 268
+HA+ +K T V +LVD YA C + S + ++ +K+ I +N +I AY +
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596
Query: 269 LCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEG-RQVHSLVIKMGSERNVFV 327
+A+ L M + P + T ++ ACS + EG R + + G E +
Sbjct: 597 GNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDH 656
Query: 328 ASALVDMYSKGGDIDEA 344
+ +VD+ + G I EA
Sbjct: 657 YACVVDLLGRAGRIKEA 673
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%)
Query: 77 GMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCF 136
G +R++ KP+ L T L SCA G +IHAY +++ ++ + SALVD YAKC
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 566
Query: 137 AIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVIS 196
+ +RKVF + + ++W +I + +G G++A L + M+ +KPN T SV +
Sbjct: 567 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 626
Query: 197 ACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
AC + + G S+ +VD +I ++ L+N
Sbjct: 627 ACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 678
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 182/307 (59%), Gaps = 4/307 (1%)
Query: 106 GLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSA 165
G +HA++++S + ++ + + L++ YAKC ++ +ARKVF M D V+WT+LI+G+S
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 166 NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS-TLHAHVVKRGFRTSN 224
+ + DA L F +ML PN FTL+SVI A ++ C LH VK GF ++
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC--CGHQLHGFCVKCGFDSNV 196
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
V +L+D Y +DD+ L+ + ++ + +N++I+ +++ + AL+LF M +
Sbjct: 197 HVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD 256
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
F P+ + ++ ACSS L +G+ VH+ +IK G + F + L+DMY+K G I +A
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
R + D+ + ++ V W +++ YAQ G G EA+ F+ + + P+ I F ++LTAC+H
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE-MRRVGIRPNEISFLSVLTACSH 375
Query: 405 AGFLEKG 411
+G L++G
Sbjct: 376 SGLLDEG 382
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 156/306 (50%), Gaps = 2/306 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ +S++ AL M R P++ L + + + A R G Q+H + V+ G+
Sbjct: 133 ISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGF 192
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ N+ + SAL+D Y + + DA+ VF A++ + VSW +LIAG + A LF+
Sbjct: 193 DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQG 252
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
ML +P+ F+ S+ AC L+ +HA+++K G + F +L+D YA
Sbjct: 253 MLRDGFRPSHFSYASLFGAC-SSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 311
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
I D+ + + +++D + +NS+++AY+Q+ +A+ F EMR+ P + + ++L
Sbjct: 312 SIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLT 371
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNNV 357
ACS L EG + L+ K G + +VD+ + GD++ A RF+ +
Sbjct: 372 ACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Query: 358 LWTTMI 363
+W ++
Sbjct: 432 IWKALL 437
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 131/234 (55%), Gaps = 2/234 (0%)
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
++ G++I + +++ C K +Q +HAH+++ FR + +L++ YA C
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQ-GRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
++++ + + ++D + + ++IS YSQ+ DAL F +M + +SP + TL +++
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
A ++ G Q+H +K G + NV V SAL+D+Y++ G +D+A+ V D +N+V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W +I G+A+ +ALELF +L + P H + ++ AC+ GFLE+G
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQG 281
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I H++ + T++AL+L GM R +PS + +C+ G +HAY+++
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
SG + F + L+D YAK +I DARK+F + D VSW SL+ ++ +G G++A
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 176 FKEMLGTHIKPNCFTLTSVISAC--VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
F+EM I+PN + SV++AC G D H L + K G + ++VD
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL---MKKDGIVPEAWHYVTVVDL 407
Query: 234 YANCKQIDDSLLLLNETS-EKDTIVYNSMISA 264
++ +L + E E ++ ++++A
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 198/357 (55%), Gaps = 3/357 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + N ++ L + M + + + + + CA +R LG +H+ V+
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK 324
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ + + L+D Y+KC + A+ VFR M VS+TS+IAG++ G +A L
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F+EM I P+ +T+T+V++ C + L +H + + FV +L+D YA
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYR-LLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF-VEMRQKKFSPTDHTLC 294
C + ++ L+ +E KD I +N++I YS+N + +AL LF + + +K+FSP + T+
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+L AC+SL++ +GR++H +++ G + VA++LVDMY+K G + A + D + K
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 563
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ V WT MI GY G G EA+ LF++ + + + D I F ++L AC+H+G +++G
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQ-MRQAGIEADEISFVSLLYACSHSGLVDEG 619
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 174/311 (55%), Gaps = 1/311 (0%)
Query: 101 RNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLI 160
R+ H G Q+H ++++SG+ + + ++LV FY K + ARKVF M D +SW S+I
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 161 AGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF 220
G+ +NG +F +ML + I+ + T+ SV + C + + +H+ VK F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR-LISLGRAVHSIGVKACF 327
Query: 221 RTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE 280
+ +L+D Y+ C +D + + E S++ + Y SMI+ Y++ +G+A++LF E
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 281 MRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGD 340
M ++ SP +T+ +LN C+ L EG++VH + + ++FV++AL+DMY+K G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 341 IDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILT 400
+ EA V + VK+ + W T+I GY+++ EAL LF+ LL E+ +PD +L
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 401 ACNHAGFLEKG 411
AC +KG
Sbjct: 508 ACASLSAFDKG 518
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 179/356 (50%), Gaps = 4/356 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + + ++ + + A+ LL + P LC+ L CA +++ G ++ ++
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G+ + L S L Y C + +A +VF +K+ + W L+ + +G + L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
FK+M+ + ++ + +T S +S ++ LH ++K GF N V SLV Y
Sbjct: 183 FKKMMSSGVEMDSYTF-SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
+++D + + +E +E+D I +NS+I+ Y N + L +FV+M T+ +
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+ C+ + GR VHS+ +K R + L+DMYSK GD+D A+ V + S ++
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V +T+MI GYA+ G EA++LF+ + E ++PD TA+L C L++G
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEE-MEEEGISPDVYTVTAVLNCCARYRLLDEG 416
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 208/435 (47%), Gaps = 52/435 (11%)
Query: 25 LRHLHAFPVSDAKNFLCRQFFIKKFSGKTFEND-------CITKHSKNASTDRALDLLTG 77
L LH F + +N +K+FS K F N + + + A+D+L G
Sbjct: 9 LTTLHGFILK--RNLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCG 66
Query: 78 MNRL---------TAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
L KP S C + C++ R G ++H ++ SG+ + + + L
Sbjct: 67 QKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRL 126
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG------- 181
+ YAKC ++VDARKVF M D SW ++ G++ G +A LF EM
Sbjct: 127 LRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWT 186
Query: 182 -------------------------THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVV 216
+ +PN FT+ S+ A ++ +H H+V
Sbjct: 187 AMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTV-SIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 217 KRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQ 276
+ G + + SL+D Y C ID++ + ++ EKD + + SMI Y ++ +
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 277 LFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYS 336
LF E+ P ++T +LNAC+ L + G+QVH + ++G + F +S+LVDMY+
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYT 365
Query: 337 KGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFT 396
K G+I+ A+ V+D + V WT++I G AQ+G+ EAL+ FD LL + PDH+ F
Sbjct: 366 KCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD-LLLKSGTKPDHVTFV 424
Query: 397 AILTACNHAGFLEKG 411
+L+AC HAG +EKG
Sbjct: 425 NVLSACTHAGLVEKG 439
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 162/315 (51%), Gaps = 4/315 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRL-TAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG 117
+T + K + AL L + M R+ ++P+ + A+++ A + G +IH ++VR+G
Sbjct: 189 VTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAG 248
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
+ + L S+L+D Y KC I +AR +F + D VSWTS+I + + + R+ F LF
Sbjct: 249 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS 308
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
E++G+ +PN +T V++AC + +H ++ + GF +F SLVD Y C
Sbjct: 309 ELVGSCERPNEYTFAGVLNACADLTTE-ELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
I+ + +++ + D + + S+I +QN +AL+ F + + P T +L
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 298 NACSSLASLIEGRQ-VHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK-N 355
+AC+ + +G + +S+ K + LVD+ ++ G ++ + V+ + +K +
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 356 NVLWTTMIMGYAQSG 370
LW +++ G + G
Sbjct: 488 KFLWASVLGGCSTYG 502
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 123/285 (43%), Gaps = 35/285 (12%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I ++ K++ L + + +P++ L++CA LG Q+H Y+ R G+
Sbjct: 291 IDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGF 350
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ F SS+LVD Y KC I A+ V D VSWTSLI G + NGQ +A F
Sbjct: 351 DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDL 410
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
+L + KP+ T +V+SAC HA +V++G S+ + +
Sbjct: 411 LLKSGTKPDHVTFVNVLSACT------------HAGLVEKGLE----FFYSITEKHR--- 451
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
L+ TS+ Y ++ ++ SG QL + + P+ ++L
Sbjct: 452 --------LSHTSDH----YTCLVDLLAR---SGRFEQLKSVISEMPMKPSKFLWASVLG 496
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDE 343
CS+ ++ + + K+ E N + ++Y+ G +E
Sbjct: 497 GCSTYGNIDLAEEAAQELFKIEPE-NPVTYVTMANIYAAAGKWEE 540
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 199/355 (56%), Gaps = 4/355 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I++ S+ AL L M+R K ++ + L SC G+QIH + +
Sbjct: 85 ISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNC 144
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
NL + SAL+ YA+C + +AR F +MK D VSW ++I G++AN +F LF+
Sbjct: 145 AGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQL 204
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
ML KP+CFT S++ A + K L+ S LH +K GF S+ +I SLV+ Y C
Sbjct: 205 MLTEGKKPDCFTFGSLLRASIVVK-CLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCG 263
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYS-QNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+ ++ L T ++D + ++I+ +S QN C+ DA +F +M + K + + ++L
Sbjct: 264 SLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSML 323
Query: 298 NACSSLASLIEGRQVHSLVIKMGSER-NVFVASALVDMYSKGGDIDEARFVLDQTSVKNN 356
C+++AS+ GRQ+H +K R +V + ++L+DMY+K G+I++A ++ K+
Sbjct: 324 KICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDV 383
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
WT++I GY + G +A++L++R+ ER + P+ + F ++L+AC+H G E G
Sbjct: 384 RSWTSLIAGYGRHGNFEKAIDLYNRMEHER-IKPNDVTFLSLLSACSHTGQTELG 437
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 157/320 (49%), Gaps = 7/320 (2%)
Query: 86 SKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVF 145
S S+ AL C+ L IH + +G+ NL L L+D Y K + ARK+F
Sbjct: 11 SPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLF 70
Query: 146 RAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD-- 203
+ D VSWT++I+ FS G DA LLFKEM +K N FT SV+ +C KD
Sbjct: 71 DRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSC---KDLG 127
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
L+ +H V K + V +L+ YA C +++++ L + E+D + +N+MI
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMID 187
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
Y+ N C+ + LF M + P T ++L A + L ++H L IK+G R
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR 247
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGL-EALELFDRL 382
+ + +LV+ Y K G + A + + T ++ + T +I G++Q +A ++F +
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 383 LTERELTPDHIYFTAILTAC 402
+ + D + +++L C
Sbjct: 308 IRMKT-KMDEVVVSSMLKIC 326
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 139/292 (47%), Gaps = 4/292 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++ NA D + L M KP + L + + + ++H ++
Sbjct: 183 NAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIK 242
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSA-NGQGRDAFL 174
G+ + L +LV+ Y KC ++ +A K+ K D +S T+LI GFS N DAF
Sbjct: 243 LGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFD 302
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG-FRTSNFVICSLVDC 233
+FK+M+ K + ++S++ C ++ +H +K R + SL+D
Sbjct: 303 IFKDMIRMKTKMDEVVVSSMLKICT-TIASVTIGRQIHGFALKSSQIRFDVALGNSLIDM 361
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
YA +I+D++L E EKD + S+I+ Y ++ A+ L+ M ++ P D T
Sbjct: 362 YAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTF 421
Query: 294 CTILNACSSLASLIEGRQVHSLVI-KMGSERNVFVASALVDMYSKGGDIDEA 344
++L+ACS G +++ +I K G E S ++DM ++ G ++EA
Sbjct: 422 LSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 188/343 (54%), Gaps = 7/343 (2%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
+AL++ M ++ L +A+ +C++ LG H ++ G+E N F+SS L
Sbjct: 146 KALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLA 205
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEM-LGTHIKPNC 188
Y VDAR+VF M D + WT++++ FS N +A LF M G + P+
Sbjct: 206 YLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDG 265
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
T +V++AC G L+ +H ++ G ++ V SL+D Y C + ++ + N
Sbjct: 266 STFGTVLTAC-GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFN 324
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
S+K+++ +++++ Y QN A+++F EM +K + T+L AC+ LA++
Sbjct: 325 GMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRL 380
Query: 309 GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQ 368
G+++H ++ G NV V SAL+D+Y K G ID A V + S++N + W M+ AQ
Sbjct: 381 GKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQ 440
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+GRG EA+ F+ ++ ++ + PD+I F AILTAC H G +++G
Sbjct: 441 NGRGEEAVSFFNDMV-KKGIKPDYISFIAILTACGHTGMVDEG 482
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 179/336 (53%), Gaps = 12/336 (3%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
A+ +L + + + + L +C K ++ G+Q HA++V+SG E + + ++L+
Sbjct: 45 AIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLS 104
Query: 131 FYAKCF-AIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
Y K + + R+VF V D +SWTS+++G+ + A +F EM+ + N F
Sbjct: 105 LYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEF 164
Query: 190 TLTSVISACVGQKDA-LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
TL+S + AC + L C H V+ GF ++F+ +L Y ++ D+ + +
Sbjct: 165 TLSSAVKACSELGEVRLGRC--FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFD 222
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLI 307
E E D I + +++SA+S+N +AL LF M R K P T T+L AC +L L
Sbjct: 223 EMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Query: 308 EGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYA 367
+G+++H +I G NV V S+L+DMY K G + EAR V + S KN+V W+ ++ GY
Sbjct: 283 QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYC 342
Query: 368 QSGRGLEALELFDRLLTERELTPDHIY-FTAILTAC 402
Q+G +A+E+F RE+ +Y F +L AC
Sbjct: 343 QNGEHEKAIEIF------REMEEKDLYCFGTVLKAC 372
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 158/312 (50%), Gaps = 16/312 (5%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTA-KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG 117
++ SKN + AL L M+R P S T L++C R G +IH L+ +G
Sbjct: 236 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 295
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
N+ + S+L+D Y KC ++ +AR+VF M + VSW++L+ G+ NG+ A +F+
Sbjct: 296 IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR 355
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
EM + + + +V+ AC G A++ +H V+RG + V +L+D Y
Sbjct: 356 EME----EKDLYCFGTVLKACAGLA-AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKS 410
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
ID + + ++ S ++ I +N+M+SA +QN +A+ F +M +K P + IL
Sbjct: 411 GCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAIL 470
Query: 298 NACSSLASLIEGRQVHSLV-----IKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
AC + EGR L+ IK G+E S ++D+ + G +EA +L++
Sbjct: 471 TACGHTGMVDEGRNYFVLMAKSYGIKPGTEH----YSCMIDLLGRAGLFEEAENLLERAE 526
Query: 353 VKNNV-LWTTMI 363
+N+ LW ++
Sbjct: 527 CRNDASLWGVLL 538
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 207 HCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQ-IDDSLLLLNETSEKDTIVYNSMISAY 265
H HAHVVK G T V SL+ Y + ++ + + KD I + SM+S Y
Sbjct: 79 HGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGY 138
Query: 266 SQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNV 325
AL++FVEM + TL + + ACS L + GR H +VI G E N
Sbjct: 139 VTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNH 198
Query: 326 FVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTE 385
F++S L +Y + +AR V D+ + + WT ++ ++++ EAL LF +
Sbjct: 199 FISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRG 258
Query: 386 RELTPDHIYFTAILTACNHAGFLEKG 411
+ L PD F +LTAC + L++G
Sbjct: 259 KGLVPDGSTFGTVLTACGNLRRLKQG 284
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 199/365 (54%), Gaps = 11/365 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I +++ + AL + M +L+ P++S A+ +C+ + G Q H
Sbjct: 45 NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
GY+ ++F+SSAL+ Y+ C + DARKVF + + VSWTS+I G+ NG DA L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164
Query: 176 FKEMLGTH------IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS 229
FK++L + + L SVISAC + A ++H+ V+KRGF V +
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISAC-SRVPAKGLTESIHSFVIKRGFDRGVSVGNT 223
Query: 230 LVDCYANCKQ--IDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
L+D YA + + + + ++ +KD + YNS++S Y+Q+ S +A ++F + + K
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 288 PTDH-TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARF 346
+ TL T+L A S +L G+ +H VI+MG E +V V ++++DMY K G ++ AR
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343
Query: 347 VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
D+ KN WT MI GY G +ALELF ++ + + P++I F ++L AC+HAG
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI-DSGVRPNYITFVSVLAACSHAG 402
Query: 407 FLEKG 411
+G
Sbjct: 403 LHVEG 407
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 6/164 (3%)
Query: 246 LLNETSEK-DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
L N +K D +NS+I+ +++ S +AL F MR+ PT + + ACSSL
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 305 SLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIM 364
+ G+Q H G + ++FV+SAL+ MYS G +++AR V D+ +N V WT+MI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 365 GYAQSGRGLEALELFDRLLTERELTPDHIY-----FTAILTACN 403
GY +G L+A+ LF LL + D ++ ++++AC+
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 205/358 (57%), Gaps = 8/358 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + ++ + AL L G L A S +V+ + LS+C +A +++ G+ IH+Y ++
Sbjct: 220 NAMISGYCQSGNAKEALTLSNG---LRAMDSVTVV-SLLSACTEAGDFNRGVTIHSYSIK 275
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G E LF+S+ L+D YA+ + D +KVF M V D +SW S+I + N Q A L
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC-SLVDCY 234
F+EM + I+P+C TL S +++ + Q ++ C ++ +++G+ + I ++V Y
Sbjct: 336 FQEMRLSRIQPDCLTLIS-LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK-KFSPTDHTL 293
A +D + + N D I +N++IS Y+QN + +A++++ M ++ + + T
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
++L ACS +L +G ++H ++K G +VFV ++L DMY K G +++A + Q
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
N+V W T+I + G G +A+ LF +L E + PDHI F +L+AC+H+G +++G
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE-GVKPDHITFVTLLSACSHSGLVDEG 571
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 169/328 (51%), Gaps = 9/328 (2%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P + L +C + G +IH ++ G+ +++++++L+ Y++ A+ +AR +
Sbjct: 151 PDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F M V D SW ++I+G+ +G ++A L + + T+ S++SAC D
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGD- 262
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
T+H++ +K G + FV L+D YA ++ D + + +D I +NS+I A
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS-ER 323
Y N A+ LF EMR + P TL ++ + S L + R V ++ G
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
++ + +A+V MY+K G +D AR V + + + W T+I GYAQ+G EA+E+++ +
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
E E+ + + ++L AC+ AG L +G
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQG 470
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 145/286 (50%), Gaps = 14/286 (4%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
+HA LV S N+ +S+ LV+ Y + AR F ++ D +W +I+G+ G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 169 GRDA---FLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNF 225
+ F LF ML + + P+ T SV+ AC D + +H +K GF +
Sbjct: 133 SSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVIDG----NKIHCLALKFGFMWDVY 186
Query: 226 VICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKK 285
V SL+ Y+ K + ++ +L +E +D +N+MIS Y Q+ + +AL L +R
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR--- 243
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
+ T+ ++L+AC+ G +HS IK G E +FV++ L+D+Y++ G + + +
Sbjct: 244 -AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPD 391
V D+ V++ + W ++I Y + + L A+ LF + R + PD
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR-IQPD 347
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 164/354 (46%), Gaps = 18/354 (5%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + N RA+ L M +P L + S ++ + + + +R
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR 376
Query: 116 SGY-EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
G+ +++ + +A+V YAK + AR VF + D +SW ++I+G++ NG +A
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 175 LFKEMLGT-HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
++ M I N T SV+ AC Q AL+ LH ++K G FV+ SL D
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPAC-SQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADM 495
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y C +++D+L L + +++ +N++I+ + + A+ LF EM + P T
Sbjct: 496 YGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 555
Query: 294 CTILNACSSLASLIEGRQVHSLV-IKMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQT 351
T+L+ACS + EG+ ++ G ++ +VDMY + G ++ A +F+ +
Sbjct: 556 VTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615
Query: 352 SVKNNVLWTTM-----IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILT 400
+ +W + + G G+ + + LF E+ P+H+ + +L+
Sbjct: 616 LQPDASIWGALLSACRVHGNVDLGK-IASEHLF-------EVEPEHVGYHVLLS 661
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
LQ LHA +V + + LV+ Y + + + +D +N MIS
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 265 YSQNLCSGDALQLF-VEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
Y + S + ++ F + M +P T ++L AC ++ I+G ++H L +K G
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGFMW 183
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
+V+VA++L+ +YS+ + AR + D+ V++ W MI GY QSG EAL L + L
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL- 242
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
R + D + ++L+AC AG +G
Sbjct: 243 --RAM--DSVTVVSLLSACTEAGDFNRG 266
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
T+ C++L S + +H+ ++ +NV +++ LV++Y G++ AR D +
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
+ W MI GY ++G E + F + LTPD+ F ++L AC
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 193/357 (54%), Gaps = 6/357 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGM-NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I+ + KN ++ + + N + + L L + A+ + LG+QIH+
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
++G + ++ + + Y+KC I +FR + D V++ ++I G+++NG+ +
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
LFKE++ + + TL S++ L +H + +K F + V +L Y
Sbjct: 309 LFKELMLSGARLRSSTLVSLVPV----SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVY 364
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+ +I+ + L +E+ EK +N+MIS Y+QN + DA+ LF EM++ +FSP T+
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
IL+AC+ L +L G+ VH LV E +++V++AL+ MY+K G I EAR + D + K
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
N V W TMI GY G+G EAL +F +L +TP + F +L AC+HAG +++G
Sbjct: 485 NEVTWNTMISGYGLHGQGQEALNIFYEMLNS-GITPTPVTFLCVLYACSHAGLVKEG 540
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 169/351 (48%), Gaps = 7/351 (1%)
Query: 63 SKNASTDRALDLLTGMNRLT-AKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDN 121
S N S +L + + + T KP+ S A+S+ + R+ G IH V G +
Sbjct: 94 SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 122 LFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
L L S +V Y K + + DARKVF M D + W ++I+G+ N ++ +F++++
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 182 TH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
+ + TL ++ A V + L+ +H+ K G + ++V+ + Y+ C +I
Sbjct: 214 ESCTRLDTTTLLDILPA-VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 241 DDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
L E + D + YN+MI Y+ N + +L LF E+ TL +++
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS 332
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWT 360
L + +H +K + V++AL +YSK +I+ AR + D++ K+ W
Sbjct: 333 GHLMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
MI GY Q+G +A+ LF R + + E +P+ + T IL+AC G L G
Sbjct: 390 AMISGYTQNGLTEDAISLF-REMQKSEFSPNPVTITCILSACAQLGALSLG 439
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 176/356 (49%), Gaps = 17/356 (4%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGL--QIHAYL 113
N I ++ N T+ +L L + A+ S L + + HL L IH Y
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG-----HLMLIYAIHGYC 345
Query: 114 VRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
++S + + +S+AL Y+K I ARK+F SW ++I+G++ NG DA
Sbjct: 346 LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
LF+EM + PN T+T ++SAC Q AL +H V F +S +V +L+
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSAC-AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGM 464
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
YA C I ++ L + ++K+ + +N+MIS Y + +AL +F EM +PT T
Sbjct: 465 YAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTF 524
Query: 294 CTILNACSSLASLIEGRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
+L ACS + EG ++ +S++ + G E +V + +VD+ + G + A ++ S
Sbjct: 525 LCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS 584
Query: 353 VK-NNVLWTTMIMGYAQSGRGLEALELFDRLLTER--ELTPDHIYFTAILTACNHA 405
++ + +W T+ +G + + R ++E+ EL PD++ + +L+ + A
Sbjct: 585 IEPGSSVWETL-LGACRIHKDTN----LARTVSEKLFELDPDNVGYHVLLSNIHSA 635
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
++ H + HA ++ GFR ++ L ++ I + + D ++N ++
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 264 AYSQNLCSGDALQLFVEMRQK-KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE 322
+S N +L +F +R+ P T ++A S GR +H + G +
Sbjct: 92 GFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCD 151
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ + S +V MY K +++AR V D+ K+ +LW TMI GY ++ +E++++F L
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 383 LTE 385
+ E
Sbjct: 212 INE 214
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 178/308 (57%), Gaps = 6/308 (1%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK-VHDQVSWTSLIAGFSAN 166
Q+HA +++ G + + + +A++ YA C ++ DA++VF + D +SW S+IAGFS +
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 167 GQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFV 226
AF LF +M ++ + +T T ++SAC G++ + +LH V+K+G
Sbjct: 284 ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI-FGKSLHGMVIKKGLEQVTSA 342
Query: 227 ICSLVDCYAN--CKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
+L+ Y ++D+L L KD I +NS+I+ ++Q S DA++ F +R
Sbjct: 343 TNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS 402
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
+ D+ +L +CS LA+L G+Q+H+L K G N FV S+L+ MYSK G I+ A
Sbjct: 403 EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESA 462
Query: 345 RFVLDQTSVKNN-VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
R Q S K++ V W MI+GYAQ G G +L+LF ++ + + DH+ FTAILTAC+
Sbjct: 463 RKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQN-VKLDHVTFTAILTACS 521
Query: 404 HAGFLEKG 411
H G +++G
Sbjct: 522 HTGLIQEG 529
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 182/363 (50%), Gaps = 12/363 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ ++ + A L T M R + L A + + LG Q+H +++
Sbjct: 70 NTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIK 129
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
GYE N+++ S+LVD YAKC + DA + F+ + + VSW +LIAGF + AF L
Sbjct: 130 GGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWL 189
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTL---HAHVVKRGFRTSNFVICSLVD 232
M +K + + D C+ L HA V+K G + + +++
Sbjct: 190 LGLM---EMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMIS 246
Query: 233 CYANCKQIDDSLLLLNE-TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD- 290
YA+C + D+ + + KD I +NSMI+ +S++ A +LF++M Q+ + TD
Sbjct: 247 SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM-QRHWVETDI 305
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK--GGDIDEARFVL 348
+T +L+ACS I G+ +H +VIK G E+ +AL+ MY + G +++A +
Sbjct: 306 YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLF 365
Query: 349 DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
+ K+ + W ++I G+AQ G +A++ F L + E+ D F+A+L +C+ L
Sbjct: 366 ESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS-EIKVDDYAFSALLRSCSDLATL 424
Query: 409 EKG 411
+ G
Sbjct: 425 QLG 427
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 152/309 (49%), Gaps = 30/309 (9%)
Query: 110 HAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQG 169
H Y ++ G ++++S+ ++D Y K + A +F M D VSW ++I+G+++ G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 170 RDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS 229
DA+ LF M + + ++ + ++ K +H V+K G+ + +V S
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVK-RFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 230 LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF--------VEM 281
LVD YA C++++D+ E SE +++ +N++I+ + Q A L V M
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 282 RQKKFSP-----TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYS 336
F+P D C +L +QVH+ V+K+G + + + +A++ Y+
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLL------------KQVHAKVLKLGLQHEITICNAMISSYA 249
Query: 337 KGGDIDEARFVLDQ-TSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIY- 394
G + +A+ V D K+ + W +MI G+++ A ELF ++ +R IY
Sbjct: 250 DCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM--QRHWVETDIYT 307
Query: 395 FTAILTACN 403
+T +L+AC+
Sbjct: 308 YTGLLSACS 316
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 165/351 (47%), Gaps = 14/351 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I SK+ + A +L M R + LS+C+ + G +H +++
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK 333
Query: 116 SGYEDNLFLSSALVDFYAK--CFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
G E ++AL+ Y + + DA +F ++K D +SW S+I GF+ G DA
Sbjct: 334 KGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAV 393
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
F + + IK + + ++++ +C LQ +HA K GF ++ FVI SL+
Sbjct: 394 KFFSYLRSSEIKVDDYAFSALLRSC-SDLATLQLGQQIHALATKSGFVSNEFVISSLIVM 452
Query: 234 YANCKQIDDSLLLLNETSEK-DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
Y+ C I+ + + S K T+ +N+MI Y+Q+ +L LF +M + T
Sbjct: 453 YSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVT 512
Query: 293 LCTILNACSSLASLIEGRQVHSL---VIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
IL ACS + EG ++ +L V K+ + A+ VD+ + G +++A+ +++
Sbjct: 513 FTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAA--VDLLGRAGLVNKAKELIE 570
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLE-ALELFDRLLTERELTP-DHIYFTAI 398
+ + + +G ++ +E A ++ + LL E+ P DH + ++
Sbjct: 571 SMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL---EIEPEDHFTYVSL 618
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%)
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
Q S H + +K G + +V ++D Y + + +L +E ++D++ +N+MIS
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
Y+ DA LF M++ ++ +L +S+ G QVH LVIK G E N
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
V+V S+LVDMY+K +++A + S N+V W +I G+ Q A L +
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM 195
Query: 385 ERELTPDHIYFTAILTACNHAGF 407
+ +T D F +LT + F
Sbjct: 196 KAAVTMDAGTFAPLLTLLDDPMF 218
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 193/358 (53%), Gaps = 4/358 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + +++N ALDL M + + P L +S C+ ++ G +HA L +
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ + SAL+ Y+KC DA VF++M+ D V+W SLI+G NG+ ++A +
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 176 FKEMLGT--HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
F +M +KP+ +TSV +AC G +AL+ +H ++K G + FV SL+D
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGL-EALRFGLQVHGSMIKTGLVLNVFVGSSLIDL 520
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y+ C + +L + S ++ + +NSMIS YS+N ++ LF M + P ++
Sbjct: 521 YSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSI 580
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
++L A SS ASL++G+ +H +++G + + +AL+DMY K G A + +
Sbjct: 581 TSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH 640
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
K+ + W MI GY G + AL LFD + E +PD + F ++++ACNH+GF+E+G
Sbjct: 641 KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE-SPDDVTFLSLISACNHSGFVEEG 697
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 210/429 (48%), Gaps = 25/429 (5%)
Query: 6 AISDVLAVLPPSGSLRLPDLRHLHAFPVSDA-------KNFLCRQFF------------- 45
++S V++V+ G+ R + + +H F + ++ K L +F
Sbjct: 170 SLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFV 229
Query: 46 -IKKFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWH 104
I+ S N I + + +LDL + K + AL +C+++ N
Sbjct: 230 EIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSG 289
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFS 164
G QIH +V+ G ++ ++ ++L+ Y+KC + +A VF + W +++A ++
Sbjct: 290 FGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
N G A LF M + P+ FTL++VIS C + ++HA + KR ++++
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC-SVLGLYNYGKSVHAELFKRPIQSTS 408
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMR-- 282
+ +L+ Y+ C D+ L+ EKD + + S+IS +N +AL++F +M+
Sbjct: 409 TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDD 468
Query: 283 QKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDID 342
P + ++ NAC+ L +L G QVH +IK G NVFV S+L+D+YSK G +
Sbjct: 469 DDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPE 528
Query: 343 EARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
A V S +N V W +MI Y+++ +++LF+ +L++ + PD + T++L A
Sbjct: 529 MALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-IFPDSVSITSVLVAI 587
Query: 403 NHAGFLEKG 411
+ L KG
Sbjct: 588 SSTASLLKG 596
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 159/325 (48%), Gaps = 9/325 (2%)
Query: 84 KPSKSVLCTALSSCAKARNWHL--GLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDA 141
+P L +S K N+ G QIH +++R+ + + FL +AL+D Y K +DA
Sbjct: 165 RPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDA 224
Query: 142 RKVFRAMKVHDQ---VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC 198
+VF +++ D+ V W +I GF +G + L+ +K + T + AC
Sbjct: 225 WRVF--VEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGAC 282
Query: 199 VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVY 258
Q + +H VVK G +V SL+ Y+ C + ++ + + +K ++
Sbjct: 283 -SQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW 341
Query: 259 NSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK 318
N+M++AY++N AL LF MRQK P TL +++ CS L G+ VH+ + K
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 319 MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
+ + SAL+ +YSK G +A V K+ V W ++I G ++G+ EAL++
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 379 FDRLLTERE-LTPDHIYFTAILTAC 402
F + + + L PD T++ AC
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNAC 486
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 10/327 (3%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVF-------R 146
L +C+ N G IH +V G+ + F++++LV+ Y KC + A +VF
Sbjct: 67 LKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS 126
Query: 147 AMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA-CVGQKDAL 205
+ D W S+I G+ + ++ F+ ML ++P+ F+L+ V+S C
Sbjct: 127 GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRR 186
Query: 206 QHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIV-YNSMISA 264
+ +H +++ T +F+ +L+D Y D+ + E +K +V +N MI
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
+ + +L L++ + + L ACS + GRQ+H V+KMG +
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
+V ++L+ MYSK G + EA V K +W M+ YA++ G AL+LF +
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG-FMR 365
Query: 385 ERELTPDHIYFTAILTACNHAGFLEKG 411
++ + PD + +++ C+ G G
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYG 392
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 4/284 (1%)
Query: 64 KNASTDRALDLLTGM--NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDN 121
KN AL + M + + KP ++ + ++CA GLQ+H ++++G N
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 122 LFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+F+ S+L+D Y+KC A KVF +M + V+W S+I+ +S N + LF ML
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
I P+ ++TSV+ A + +L +LH + ++ G + + +L+D Y C
Sbjct: 571 QGIFPDSVSITSVLVA-ISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 242 DSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
+ + + K I +N MI Y + AL LF EM++ SP D T ++++AC+
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 302 SLASLIEGRQVHSLVIK-MGSERNVFVASALVDMYSKGGDIDEA 344
+ EG+ + + + G E N+ + +VD+ + G ++EA
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA 733
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 33/205 (16%)
Query: 211 LHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLC 270
LH ++RG +C + D Y + I+ + L + E Y + YS++
Sbjct: 5 LHDVHIRRG-------LCCVADSYISPASINSGIRALIQKGE-----YLQALHLYSKHDG 52
Query: 271 SGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASA 330
S F + T ++L ACS+L +L G+ +H V+ +G + F+A++
Sbjct: 53 S------------SPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATS 100
Query: 331 LVDMYSKGGDIDEARFVLD-------QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
LV+MY K G +D A V D S ++ +W +MI GY + R E + F R+L
Sbjct: 101 LVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRML 160
Query: 384 TERELTPDHIYFTAILTA-CNHAGF 407
+ PD + +++ C F
Sbjct: 161 V-FGVRPDAFSLSIVVSVMCKEGNF 184
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 184/330 (55%), Gaps = 9/330 (2%)
Query: 87 KSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFA---IVDARK 143
K L + S+CA+ N LG Q+H++ +RSG D++ +LVD YAKC A + D RK
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRK 326
Query: 144 VFRAMKVHDQVSWTSLIAGFSAN-GQGRDAFLLFKEMLGT-HIKPNCFTLTSVISACVGQ 201
VF M+ H +SWT+LI G+ N +A LF EM+ H++PN FT +S AC
Sbjct: 327 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSM 261
D L KRG +++ V S++ + +++D+ SEK+ + YN+
Sbjct: 387 SDPRVGKQVL-GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
+ +NL A +L E+ +++ + T ++L+ +++ S+ +G Q+HS V+K+G
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 322 ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDR 381
N V +AL+ MYSK G ID A V + +N + WT+MI G+A+ G + LE F++
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 565
Query: 382 LLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ E + P+ + + AIL+AC+H G + +G
Sbjct: 566 MI-EEGVKPNEVTYVAILSACSHVGLVSEG 594
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 179/356 (50%), Gaps = 13/356 (3%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSV-LCTALSSCAKARNWHLGLQIHAYLVRSG 117
I +H A+ L M R +P SV + L SC +AR++ LG +HA L+
Sbjct: 33 ILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFD 92
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMK---VHDQVSWTSLIAGFSANGQGRDAFL 174
E + L ++L+ Y+K A VF M+ D VSW++++A + NG+ DA
Sbjct: 93 IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIK 152
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG-FRTSNFVICSLVDC 233
+F E L + PN + T+VI AC D + ++K G F + V CSL+D
Sbjct: 153 VFVEFLELGLVPNDYCYTAVIRAC-SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 234 YANCKQ-IDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
+ + +++ + ++ SE + + + MI+ Q +A++ F++M F T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 293 LCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK---GGDIDEARFVLD 349
L ++ +AC+ L +L G+Q+HS I+ G + V +LVDMY+K G +D+ R V D
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 350 QTSVKNNVLWTTMIMGYAQS-GRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
+ + + WT +I GY ++ EA+ LF ++T+ + P+H F++ AC +
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
+N + ++A LL+ + S + LS A + G QIH+ +V+ G N
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 124 LSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
+ +AL+ Y+KC +I A +VF M+ + +SWTS+I GF+ +G F +M+
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 184 IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
+KPN T +++SAC H +V G+R N
Sbjct: 571 VKPNEVTYVAILSACS------------HVGLVSEGWRHFN 599
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 281 MRQKKFSPTDH-TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGG 339
M + P D T ++L +C G+ VH+ +I+ E + + ++L+ +YSK G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 340 DIDEARFVLD---QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFT 396
D +A V + + ++ V W+ M+ Y +GR L+A+++F L E L P+ +T
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCYT 170
Query: 397 AILTACNHAGFLEKG 411
A++ AC+++ F+ G
Sbjct: 171 AVIRACSNSDFVGVG 185
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 202/358 (56%), Gaps = 8/358 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ ++ N AL + M + S+S + + CA + Q+H +V+
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK-VHDQVSWTSLIAGFSANGQGRDAFL 174
G+ + + +AL+ Y+KC A++DA ++F+ + V + VSWT++I+GF N +A
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
LF EM ++PN FT + +++A + S +HA VVK + S+ V +L+D Y
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTAL-----PVISPSEVHAQVVKTNYERSSTVGTALLDAY 438
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+++++ + + +KD + +++M++ Y+Q + A+++F E+ + P + T
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Query: 295 TILNACSSL-ASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
+ILN C++ AS+ +G+Q H IK + ++ V+SAL+ MY+K G+I+ A V +
Sbjct: 499 SILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
K+ V W +MI GYAQ G+ ++AL++F + + +R++ D + F + AC HAG +E+G
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVF-KEMKKRKVKMDGVTFIGVFAACTHAGLVEEG 615
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 180/345 (52%), Gaps = 7/345 (2%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ +++N+ D L L M +P+ AL A+ GLQ+H +V++G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ + +S++L++ Y KC + AR +F +V V+W S+I+G++ANG +A +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M +++ + + SVI C K+ L+ LH VVK GF + +L+ Y+ C
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKE-LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 239 QIDDSLLLLNETSEKDTIV-YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+ D+L L E +V + +MIS + QN +A+ LF EM++K P + T IL
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
A +I +VH+ V+K ER+ V +AL+D Y K G ++EA V K+ V
Sbjct: 405 TAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 460
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
W+ M+ GYAQ+G A+++F LT+ + P+ F++IL C
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGE-LTKGGIKPNEFTFSSILNVC 504
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 168/340 (49%), Gaps = 3/340 (0%)
Query: 63 SKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNL 122
S++ T A L ++RL + S+ + L A + G Q+H ++ G+ D++
Sbjct: 69 SRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDV 128
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
+ ++LVD Y K D RKVF MK + V+WT+LI+G++ N + LF M
Sbjct: 129 SVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNE 188
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
+PN FT + + + ++ +H VVK G + V SL++ Y C +
Sbjct: 189 GTQPNSFTFAAAL-GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
+ +L ++T K + +NSMIS Y+ N +AL +F MR ++ + +++ C++
Sbjct: 248 ARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK-GGDIDEARFVLDQTSVKNNVLWTT 361
L L Q+H V+K G + + +AL+ YSK +D R + V N V WT
Sbjct: 308 LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTA 367
Query: 362 MIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
MI G+ Q+ EA++LF + + + P+ ++ ILTA
Sbjct: 368 MISGFLQNDGKEEAVDLFSE-MKRKGVRPNEFTYSVILTA 406
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 159/309 (51%), Gaps = 20/309 (6%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSK---SVLCTALSSCAKARNWHLGLQIHAYLVRSGYED 120
+N + A+DL + M R +P++ SV+ TAL + + ++HA +V++ YE
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS-------EVHAQVVKTNYER 426
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML 180
+ + +AL+D Y K + +A KVF + D V+W++++AG++ G+ A +F E+
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486
Query: 181 GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
IKPN FT +S+++ C ++ H +K +S V +L+ YA I
Sbjct: 487 KGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 241 DDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
+ + + EKD + +NSMIS Y+Q+ + AL +F EM+++K T + AC
Sbjct: 547 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Query: 301 SSLASLIEGRQVHSLVIK-----MGSERNVFVASALVDMYSKGGDIDEARFVLDQ-TSVK 354
+ + EG + ++++ E N S +VD+YS+ G +++A V++ +
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHN----SCMVDLYSRAGQLEKAMKVIENMPNPA 662
Query: 355 NNVLWTTMI 363
+ +W T++
Sbjct: 663 GSTIWRTIL 671
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 132/251 (52%), Gaps = 7/251 (2%)
Query: 135 CFAIVDARKVFRAMKV------HDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
CF V + +++ A + D+ S+ SL+ GFS +G+ ++A LF + ++ +C
Sbjct: 34 CFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDC 93
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
+SV+ D L LH +K GF V SLVD Y D + +
Sbjct: 94 SIFSSVLKVSATLCDEL-FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
E E++ + + ++IS Y++N + + L LF+ M+ + P T L +
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 309 GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQ 368
G QVH++V+K G ++ + V+++L+++Y K G++ +AR + D+T VK+ V W +MI GYA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 369 SGRGLEALELF 379
+G LEAL +F
Sbjct: 273 NGLDLEALGMF 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
L +++ +D Y S++ +S++ + +A +LF+ + + ++L ++L
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 306 LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMG 365
+ GRQ+H IK G +V V ++LVD Y KG + + R V D+ +N V WTT+I G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
YA++ E L LF R+ E P+ F A L G +G
Sbjct: 169 YARNSMNDEVLTLFMRMQNE-GTQPNSFTFAAALGVLAEEGVGGRG 213
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 196/361 (54%), Gaps = 10/361 (2%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKP--------SKSVLCTALSSCAKARNWHLGLQIH 110
+ + S +S R + +L ++ P +++++ L CA+ H
Sbjct: 25 LPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACH 84
Query: 111 AYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGR 170
++R E ++ L + L++ Y+KC + AR+VF M VSW ++I ++ N
Sbjct: 85 GKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMES 144
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSL 230
+A +F EM K + FT++SV+SAC DAL+ C LH VK + +V +L
Sbjct: 145 EALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE-CKKLHCLSVKTCIDLNLYVGTAL 203
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
+D YA C I D++ + +K ++ ++SM++ Y QN +AL L+ ++
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 263
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
TL +++ ACS+LA+LIEG+Q+H+++ K G NVFVAS+ VDMY+K G + E+ + +
Sbjct: 264 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE 323
Query: 351 TSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
KN LW T+I G+A+ R E + LF++ + + + P+ + F+++L+ C H G +E+
Sbjct: 324 VQEKNLELWNTIISGFAKHARPKEVMILFEK-MQQDGMHPNEVTFSSLLSVCGHTGLVEE 382
Query: 411 G 411
G
Sbjct: 383 G 383
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 155/290 (53%), Gaps = 2/290 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I +++N ALD+ M K S+ + + LS+C + ++H V+
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVK 190
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ + NL++ +AL+D YAKC I DA +VF +M+ V+W+S++AG+ N +A LL
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
++ ++ N FTL+SVI AC AL +HA + K GF ++ FV S VD YA
Sbjct: 251 YRRAQRMSLEQNQFTLSSVICAC-SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 309
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C + +S ++ +E EK+ ++N++IS ++++ + + LF +M+Q P + T +
Sbjct: 310 KCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 369
Query: 296 ILNACSSLASLIEGRQVHSLV-IKMGSERNVFVASALVDMYSKGGDIDEA 344
+L+ C + EGR+ L+ G NV S +VD+ + G + EA
Sbjct: 370 LLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 182/327 (55%), Gaps = 2/327 (0%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P++ + L +C + + LG QIH+ ++++ ++ N ++ S L+D YAK + A +
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
D VSWT++IAG++ A F++ML I+ + LT+ +SAC G + A
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ-A 606
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
L+ +HA GF + +LV Y+ C +I++S L +T D I +N+++S
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG 666
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
+ Q+ + +AL++FV M ++ + T + + A S A++ +G+QVH+++ K G +
Sbjct: 667 FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 726
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
V +AL+ MY+K G I +A + S KN V W +I Y++ G G EAL+ FD+++
Sbjct: 727 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI- 785
Query: 385 ERELTPDHIYFTAILTACNHAGFLEKG 411
+ P+H+ +L+AC+H G ++KG
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKG 812
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 184/353 (52%), Gaps = 2/353 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ SKN A+ L M L P+ + LS+C K + +G Q+H +++ G+
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ ++ +ALV Y ++ A +F M D V++ +LI G S G G A LFK
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M ++P+ TL S++ AC L LHA+ K GF ++N + +L++ YA C
Sbjct: 380 MHLDGLEPDSNTLASLVVACSAD-GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
I+ +L ET ++ +++N M+ AY ++ ++F +M+ ++ P +T +IL
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
C L L G Q+HS +IK + N +V S L+DMY+K G +D A +L + + K+ V
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
WTTMI GY Q +AL F ++L +R + D + T ++AC L++G
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQML-DRGIRSDEVGLTNAVSACAGLQALKEG 610
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 180/356 (50%), Gaps = 2/356 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I S+ ++A++L M+ +P + L + + +C+ G Q+HAY +
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G+ N + AL++ YAKC I A F +V + V W ++ + R++F +
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F++M I PN +T S++ C+ D L+ +H+ ++K F+ + +V L+D YA
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGD-LELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
++D + +L + KD + + +MI+ Y+Q AL F +M + + L
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
++AC+ L +L EG+Q+H+ G ++ +ALV +YS+ G I+E+ +QT +
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
N+ W ++ G+ QSG EAL +F R+ E + ++ F + + A + +++G
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQG 711
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 171/328 (52%), Gaps = 3/328 (0%)
Query: 85 PSKSVLCTALSSC-AKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK 143
P++ L +C + + + QIHA ++ G D+ + + L+D Y++ + AR+
Sbjct: 184 PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARR 243
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD 203
VF +++ D SW ++I+G S N +A LF +M I P + +SV+SAC + +
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC-KKIE 302
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
+L+ LH V+K GF + +V +LV Y + + + + + S++D + YN++I+
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
SQ A++LF M P +TL +++ ACS+ +L G+Q+H+ K+G
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
N + AL+++Y+K DI+ A +T V+N VLW M++ Y + +F ++
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
E E+ P+ + +IL C G LE G
Sbjct: 483 IE-EIVPNQYTYPSILKTCIRLGDLELG 509
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 165/329 (50%), Gaps = 2/329 (0%)
Query: 84 KPSKSVLCTALSSCAKAR-NWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDAR 142
+P+ L L C K + G ++H+ +++ G + N LS L DFY + A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 143 KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK 202
KVF M +W +I ++ + F LF M+ ++ PN T + V+ AC G
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
A +HA ++ +G R S V L+D Y+ +D + + + KD + +MI
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 263 SAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE 322
S S+N C +A++LF +M PT + ++L+AC + SL G Q+H LV+K+G
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ +V +ALV +Y G++ A + S ++ V + T+I G +Q G G +A+ELF R+
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 383 LTERELTPDHIYFTAILTACNHAGFLEKG 411
+ L PD +++ AC+ G L +G
Sbjct: 381 HLDG-LEPDSNTLASLVVACSADGTLFRG 408
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 6/231 (2%)
Query: 184 IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
I+PN TL ++ C+ +L LH+ ++K G ++ + L D Y + +
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC--- 300
+ +E E+ +N MI + G+ LFV M + +P + T +L AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWT 360
S ++E Q+H+ ++ G + V + L+D+YS+ G +D AR V D +K++ W
Sbjct: 200 SVAFDVVE--QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
MI G +++ EA+ LF + + P F+++L+AC LE G
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIG 307
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 80/143 (55%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N ++ ++ + + AL + MNR + +A+ + ++ N G Q+HA + +
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+GY+ + +AL+ YAKC +I DA K F + ++VSW ++I +S +G G +A
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDS 780
Query: 176 FKEMLGTHIKPNCFTLTSVISAC 198
F +M+ ++++PN TL V+SAC
Sbjct: 781 FDQMIHSNVRPNHVTLVGVLSAC 803
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 193/367 (52%), Gaps = 34/367 (9%)
Query: 76 TGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKC 135
T M +A ++ L T L + + LG QIH +++ G+E L + S L+ YA
Sbjct: 128 TMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV 187
Query: 136 FAIVDARKVF-------------------------------RAMKVHDQVSWTSLIAGFS 164
I DA+KVF R M+ D VSW ++I G +
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLA 246
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
NG ++A F+EM +K + + SV+ AC G A+ +HA +++ F+
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPAC-GGLGAINEGKQIHACIIRTNFQDHI 305
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
+V +L+D Y CK + + + + +K+ + + +M+ Y Q + +A+++F++M++
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
P +TL ++AC++++SL EG Q H I G V V+++LV +Y K GDID++
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
+ ++ +V++ V WT M+ YAQ GR +E ++LFD+++ + L PD + T +++AC+
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV-QHGLKPDGVTLTGVISACSR 484
Query: 405 AGFLEKG 411
AG +EKG
Sbjct: 485 AGLVEKG 491
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 159/306 (51%), Gaps = 9/306 (2%)
Query: 63 SKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNL 122
++N A++ M K + + L +C + G QIHA ++R+ ++D++
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
++ SAL+D Y KC + A+ VF MK + VSWT+++ G+ G+ +A +F +M +
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
I P+ +TL ISAC +L+ S H + G V SLV Y C IDD
Sbjct: 366 GIDPDHYTLGQAISACA-NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
S L NE + +D + + +M+SAY+Q + + +QLF +M Q P TL +++ACS
Sbjct: 425 STRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVA----SALVDMYSKGGDIDEA-RFVLDQTSVKNNV 357
+ +G++ L M SE + + S ++D++S+ G ++EA RF+ + +
Sbjct: 485 AGLVEKGQRYFKL---MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAI 541
Query: 358 LWTTMI 363
WTT++
Sbjct: 542 GWTTLL 547
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 41/328 (12%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ NLF + L+ Y+K I + F + D V+W LI G+S +G A +
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCS---TLHAHVVKRGFRTSNFVICSLVDCYA 235
M+ N +T + + + H S +H V+K GF + V L+ YA
Sbjct: 129 MM-RDFSANLTRVTLMTMLKLSSSNG--HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 236 N-------------------------------CKQIDDSLLLLNETSEKDTIVYNSMISA 264
N C I+D+L L EKD++ + +MI
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKG 244
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
+QN + +A++ F EM+ + + ++L AC L ++ EG+Q+H+ +I+ + +
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
++V SAL+DMY K + A+ V D+ KN V WT M++GY Q+GR EA+++F L
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF--LDM 362
Query: 385 ERE-LTPDHIYFTAILTACNHAGFLEKG 411
+R + PDH ++AC + LE+G
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEG 390
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 25/219 (11%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
+ + + + A+ + M R P L A+S+CA + G Q H + SG
Sbjct: 343 VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL 402
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ +S++LV Y KC I D+ ++F M V D VSWT++++ ++ G+ + LF +
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDK 462
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFR-----TSNFVICS---- 229
M+ +KP+ TLT VISAC A +V++G R TS + I
Sbjct: 463 MVQHGLKPDGVTLTGVISACS------------RAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 230 ---LVDCYANCKQIDDSLLLLNETS-EKDTIVYNSMISA 264
++D ++ ++++++ +N D I + +++SA
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 120/281 (42%), Gaps = 37/281 (13%)
Query: 162 GFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFR 221
G A Q R ++ ++ P F +++ A AL ST V R +
Sbjct: 15 GLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAY-----ALMKSSTYARRVFDRIPQ 69
Query: 222 TSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF-VE 280
+ F +L+ Y+ I + + ++D + +N +I YS + G A++ +
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 281 MRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGD 340
MR + T TL T+L SS + G+Q+H VIK+G E + V S L+ MY+ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 341 IDEARFVL----DQTSV--------------------------KNNVLWTTMIMGYAQSG 370
I +A+ V D+ +V K++V W MI G AQ+G
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 371 RGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
EA+E F R + + L D F ++L AC G + +G
Sbjct: 250 LAKEAIECF-REMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 179/318 (56%), Gaps = 7/318 (2%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
+ C R H G I +L +G+ +FL + L++ Y K + DA ++F M +
Sbjct: 68 IKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 127
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
+SWT++I+ +S + A L ML +++PN +T +SV+ +C G D LH
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV----RMLHC 183
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
++K G + FV +L+D +A + +D+L + +E D IV+NS+I ++QN S
Sbjct: 184 GIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 243
Query: 274 ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVD 333
AL+LF M++ F TL ++L AC+ LA L G Q H ++K ++++ + +ALVD
Sbjct: 244 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVD 301
Query: 334 MYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHI 393
MY K G +++A V +Q ++ + W+TMI G AQ+G EAL+LF+R+ + P++I
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT-KPNYI 360
Query: 394 YFTAILTACNHAGFLEKG 411
+L AC+HAG LE G
Sbjct: 361 TIVGVLFACSHAGLLEDG 378
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 153/307 (49%), Gaps = 8/307 (2%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ +SK +AL+LL M R +P+ + L SC + + +H +++ G
Sbjct: 134 ISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGL 190
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E ++F+ SAL+D +AK DA VF M D + W S+I GF+ N + A LFK
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M TLTSV+ AC G L+ H H+VK + + +LVD Y C
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLA-LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCG 307
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
++D+L + N+ E+D I +++MIS +QN S +AL+LF M+ P T+ +L
Sbjct: 308 SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367
Query: 299 ACSSLASLIEGRQVHSLVIKM-GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN- 356
ACS L +G + K+ G + ++D+ K G +D+A +L++ + +
Sbjct: 368 ACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDA 427
Query: 357 VLWTTMI 363
V W T++
Sbjct: 428 VTWRTLL 434
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 120/222 (54%), Gaps = 5/222 (2%)
Query: 190 TLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
T + +I C+ + A+ + + H+ G R F++ L++ Y ++D+ L ++
Sbjct: 63 TYSELIKCCISNR-AVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQ 121
Query: 250 TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEG 309
+++ I + +MISAYS+ AL+L V M + P +T ++L +C+ ++ +
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV--- 178
Query: 310 RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQS 369
R +H +IK G E +VFV SAL+D+++K G+ ++A V D+ + ++W ++I G+AQ+
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 370 GRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
R ALELF R + + T++L AC LE G
Sbjct: 239 SRSDVALELFKR-MKRAGFIAEQATLTSVLRACTGLALLELG 279
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 27/222 (12%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++N+ +D AL+L M R ++ L + L +C LG+Q H ++V+
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
Y+ +L L++ALVD Y KC ++ DA +VF MK D ++W+++I+G + NG ++A L
Sbjct: 289 --YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG---FRTSNFV------ 226
F+ M + KPN T+ V+ AC HA +++ G FR+ +
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACS------------HAGLLEDGWYYFRSMKKLYGIDPV 394
Query: 227 ---ICSLVDCYANCKQIDDSLLLLNETS-EKDTIVYNSMISA 264
++D ++DD++ LLNE E D + + +++ A
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 187/354 (52%), Gaps = 3/354 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ +++ D+A+ L +GM KP S+ T L S R G QIHA+++R+G
Sbjct: 156 ISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGL 215
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
N + + +V+ Y KC +V A++VF M V V+ T L+ G++ G+ RDA LF +
Sbjct: 216 CSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVD 275
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
++ ++ + F + V+ AC ++ L +HA V K G + V LVD Y C
Sbjct: 276 LVTEGVEWDSFVFSVVLKACASLEE-LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS 334
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH-TLCTIL 297
+ + E E + + ++++IS Y Q +A++ F +R K S + T +I
Sbjct: 335 SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
ACS LA G QVH+ IK + + SAL+ MYSK G +D+A V + + V
Sbjct: 395 QACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIV 454
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
WT I G+A G EAL LF+++++ + P+ + F A+LTAC+HAG +E+G
Sbjct: 455 AWTAFISGHAYYGNASEALRLFEKMVS-CGMKPNSVTFIAVLTACSHAGLVEQG 507
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 169/350 (48%), Gaps = 3/350 (0%)
Query: 55 ENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
EN + SK+ + A + L M++ S +C + R+ G +H +
Sbjct: 51 ENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM- 109
Query: 115 RSGYED-NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
R G E+ ++ L + ++ Y +C ++ DA K+F M + VS T++I+ ++ G A
Sbjct: 110 RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
LF ML + KP T+++ + V + AL +HAHV++ G ++ + +V+
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSLVNPR-ALDFGRQIHAHVIRAGLCSNTSIETGIVNM 228
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y C + + + ++ + K + ++ Y+Q + DAL+LFV++ +
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
+L AC+SL L G+Q+H+ V K+G E V V + LVD Y K + A +
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
N+V W+ +I GY Q + EA++ F L ++ + +T+I AC+
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 148/309 (47%), Gaps = 13/309 (4%)
Query: 89 VLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM 148
V L +CA +LG QIHA + + G E + + + LVDFY KC + A + F+ +
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI 346
Query: 149 KVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKP-NCFTLTSVISACVGQKDALQH 207
+ + VSW+++I+G+ Q +A FK + + N FT TS+ AC L
Sbjct: 347 REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQAC----SVLAD 402
Query: 208 CS---TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
C+ +HA +KR S + +L+ Y+ C +DD+ + D + + + IS
Sbjct: 403 CNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISG 462
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQ-VHSLVIKMGSER 323
++ + +AL+LF +M P T +L ACS + +G+ + +++ K
Sbjct: 463 HAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAP 522
Query: 324 NVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ ++D+Y++ G +DEA +F+ + + + W + G + + LE E+
Sbjct: 523 TIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG-CWTHKNLELGEIAGEE 581
Query: 383 LTERELTPD 391
L R+L P+
Sbjct: 582 L--RQLDPE 588
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
+ S K V N + + S++ +A + EM + S + ++ + AC L SL
Sbjct: 42 KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 309 GRQVHSLVIKMGSER-NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYA 367
GR +H ++MG E +V + + ++ MY + +++A + D+ S N V TTMI YA
Sbjct: 102 GRLLHDR-MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYA 160
Query: 368 QSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
+ G +A+ LF +L + P +Y T + + N
Sbjct: 161 EQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVN 196
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 190/356 (53%), Gaps = 2/356 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ ++ ++AL+L M +P+ L A+S+C++ G +IH V+
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G+E + +++SALVD Y KC + AR+VF+ M V+W S+I G+ A G + +
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI 296
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
M+ +P+ TLTS++ AC ++ L H +H +V++ +V CSL+D Y
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLL-HGKFIHGYVIRSVVNADIYVNCSLIDLYF 355
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C + + + + ++T + +N MIS+Y A++++ +M P T +
Sbjct: 356 KCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTS 415
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+L ACS LA+L +G+Q+H + + E + + SAL+DMYSK G+ EA + + K+
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKD 475
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V WT MI Y G+ EAL FD + + L PD + A+L+AC HAG +++G
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDE-MQKFGLKPDGVTLLAVLSACGHAGLIDEG 530
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 160/307 (52%), Gaps = 2/307 (0%)
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFS 164
LG IH +V+SGY ++ ++S+LV YAK ++ +VF M D SW ++I+ F
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
+G+ A LF M + +PN +LT ISAC + L+ +H VK+GF
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISAC-SRLLWLERGKEIHRKCVKKGFELDE 243
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
+V +LVD Y C ++ + + + K + +NSMI Y S +++ M +
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
P+ TL +IL ACS +L+ G+ +H VI+ +++V +L+D+Y K G+ + A
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA 363
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
V +T W MI Y G +A+E++D++++ + PD + FT++L AC+
Sbjct: 364 ETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS-VGVKPDVVTFTSVLPACSQ 422
Query: 405 AGFLEKG 411
LEKG
Sbjct: 423 LAALEKG 429
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 150/305 (49%), Gaps = 4/305 (1%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVS-WTSLIAGFSANG 167
+H ++ G ++ L +L++ Y C AR VF + V W SL++G+S N
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 168 QGRDAFLLFKEMLGTHI-KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFV 226
D +FK +L I P+ FT +VI A G +H VVK G+ V
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKA-YGALGREFLGRMIHTLVVKSGYVCDVVV 144
Query: 227 ICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
SLV YA ++SL + +E E+D +N++IS + Q+ + AL+LF M F
Sbjct: 145 ASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGF 204
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARF 346
P +L ++ACS L L G+++H +K G E + +V SALVDMY K ++ AR
Sbjct: 205 EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 347 VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
V + K+ V W +MI GY G +E+ +R++ E P T+IL AC+ +
Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT-RPSQTTLTSILMACSRSR 323
Query: 407 FLEKG 411
L G
Sbjct: 324 NLLHG 328
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + + +++L M +PS++ L + L +C+++RN G IH Y++R
Sbjct: 278 NSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR 337
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
S +++++ +L+D Y KC A VF + SW +I+ + + G A +
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
+ +M+ +KP+ T TSV+ AC Q AL+ +H + + T ++ +L+D Y+
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPAC-SQLAALEKGKQIHLSISESRLETDELLLSALLDMYS 456
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C ++ + N +KD + + MISAY + +AL F EM++ P TL
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 296 ILNACSSLASLIEGRQVHS-LVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT 351
+L+AC + EG + S + K G E + S ++D+ + G + EA ++ QT
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQT 573
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 3/223 (1%)
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK-QIDDSLLLLNE 249
L S++ C +L+ +H ++ G R + SL++ Y CK + N
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 250 TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS-PTDHTLCTILNACSSLASLIE 308
D ++NS++S YS+N D L++F + P T ++ A +L
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 309 GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQ 368
GR +H+LV+K G +V VAS+LV MY+K + + V D+ ++ W T+I + Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
SG +ALELF R+ + P+ + T ++AC+ +LE+G
Sbjct: 186 SGEAEKALELFGRMESS-GFEPNSVSLTVAISACSRLLWLERG 227
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 190/357 (53%), Gaps = 3/357 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ ++ + L LL M +P + +LS + +G +H +V+
Sbjct: 214 NTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVK 273
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G++ ++ L +AL+ Y KC + +V + D V WT +I+G G+ A ++
Sbjct: 274 TGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIV 333
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F EML + + + SV+++C Q + +++H +V++ G+ + SL+ YA
Sbjct: 334 FSEMLQSGSDLSSEAIASVVASC-AQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYA 392
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH-TLC 294
C +D SL++ +E+D + +N++IS Y+QN+ AL LF EM+ K D T+
Sbjct: 393 KCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVV 452
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
++L ACSS +L G+ +H +VI+ V +ALVDMYSK G ++ A+ D S K
Sbjct: 453 SLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK 512
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ V W +I GY G+G ALE++ L + P+H+ F A+L++C+H G +++G
Sbjct: 513 DVVSWGILIAGYGFHGKGDIALEIYSEFL-HSGMEPNHVIFLAVLSSCSHNGMVQQG 568
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 162/328 (49%), Gaps = 7/328 (2%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P + L +CA + GL IH ++ +G+ + ++SS+LV+ YAK + ARKV
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKV 103
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F M+ D V WT++I +S G +A L EM IKP TL ++S +
Sbjct: 104 FEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVL----E 159
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
+ LH V GF V+ S+++ Y C + D+ L ++ ++D + +N+MIS
Sbjct: 160 ITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
Y+ + L+L MR P T L+ ++ L GR +H ++K G + +
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVD 279
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL- 383
+ + +AL+ MY K G + + VL+ K+ V WT MI G + GR +AL +F +L
Sbjct: 280 MHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
+ +L+ + I +++ +C G + G
Sbjct: 340 SGSDLSSEAI--ASVVASCAQLGSFDLG 365
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 168/351 (47%), Gaps = 6/351 (1%)
Query: 62 HSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQ-IHAYLVRSGYED 120
+S+ A L+ M KP L LS + LQ +H + V G++
Sbjct: 122 YSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQ----LQCLHDFAVIYGFDC 177
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML 180
++ + +++++ Y KC + DA+ +F M+ D VSW ++I+G+++ G + L M
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 181 GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
G ++P+ T + +S G L+ LH +VK GF + +L+ Y C +
Sbjct: 238 GDGLRPDQQTFGASLSVS-GTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKE 296
Query: 241 DDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
+ S +L KD + + MIS + + AL +F EM Q + + +++ +C
Sbjct: 297 EASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASC 356
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWT 360
+ L S G VH V++ G + ++L+ MY+K G +D++ + ++ + ++ V W
Sbjct: 357 AQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWN 416
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+I GYAQ+ +AL LF+ + + D ++L AC+ AG L G
Sbjct: 417 AIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 140/278 (50%), Gaps = 3/278 (1%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
++AL + + M + + S + + ++SCA+ ++ LG +H Y++R GY + ++L
Sbjct: 328 EKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSL 387
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEM-LGTHIKPN 187
+ YAKC + + +F M D VSW ++I+G++ N A LLF+EM T + +
Sbjct: 388 ITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVD 447
Query: 188 CFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLL 247
FT+ S++ AC AL +H V++ R + V +LVD Y+ C ++ +
Sbjct: 448 SFTVVSLLQAC-SSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCF 506
Query: 248 NETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI 307
+ S KD + + +I+ Y + AL+++ E P +L++CS +
Sbjct: 507 DSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQ 566
Query: 308 EGRQVHSLVIK-MGSERNVFVASALVDMYSKGGDIDEA 344
+G ++ S +++ G E N + +VD+ + I++A
Sbjct: 567 QGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
Query: 156 WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS---TLH 212
+ S I S++G + F ML + P+ FT S++ AC +LQ S ++H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACA----SLQRLSFGLSIH 69
Query: 213 AHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSG 272
V+ GF + ++ SLV+ YA + + + E E+D + + +MI YS+ G
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 273 DALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALV 332
+A L EMR + P TL +L+ + L + +H + G + ++ V ++++
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSML 186
Query: 333 DMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDH 392
++Y K + +A+ + DQ ++ V W TMI GYA G E L+L R+ + L PD
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD-GLRPDQ 245
Query: 393 IYFTAILTACNHAGFLEKG 411
F A L+ LE G
Sbjct: 246 QTFGASLSVSGTMCDLEMG 264
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 1/202 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKS-VLCTALSSCAKARNWHLGLQIHAYLV 114
N I+ +++N +AL L M T + S + + L +C+ A +G IH ++
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
RS + +ALVD Y+KC + A++ F ++ D VSW LIAG+ +G+G A
Sbjct: 476 RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALE 535
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
++ E L + ++PN +V+S+C Q + V G ++ + +VD
Sbjct: 536 IYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLL 595
Query: 235 ANCKQIDDSLLLLNETSEKDTI 256
K+I+D+ E + +I
Sbjct: 596 CRAKRIEDAFKFYKENFTRPSI 617
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%)
Query: 255 TIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHS 314
T +NS I+ S + L F M K P T ++L AC+SL L G +H
Sbjct: 11 TKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQ 70
Query: 315 LVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLE 374
V+ G + +++S+LV++Y+K G + AR V ++ ++ V WT MI Y+++G E
Sbjct: 71 QVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGE 130
Query: 375 ALELFDRL 382
A L + +
Sbjct: 131 ACSLVNEM 138
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 173/318 (54%), Gaps = 1/318 (0%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
L++C R G ++HA+++++ Y +L + L+ FY KC + DARKV M +
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
VSWT++I+ +S G +A +F EM+ + KPN FT +V+++C+ + L +H
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCI-RASGLGLGKQIHG 177
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
+VK + + FV SL+D YA QI ++ + E+D + ++I+ Y+Q +
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 274 ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVD 333
AL++F + + SP T ++L A S LA L G+Q H V++ + ++L+D
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 334 MYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHI 393
MYSK G++ AR + D + + W M++GY++ G G E LELF + E+ + PD +
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 394 YFTAILTACNHAGFLEKG 411
A+L+ C+H + G
Sbjct: 358 TLLAVLSGCSHGRMEDTG 375
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 149/252 (59%), Gaps = 5/252 (1%)
Query: 160 IAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG 219
I+ +NG+ ++A LL MLG + + + ++++AC+ K AL+ +HAH++K
Sbjct: 27 ISQLCSNGRLQEA-LLEMAMLGPEMGFHGYD--ALLNACL-DKRALRDGQRVHAHMIKTR 82
Query: 220 FRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFV 279
+ + ++ L+ Y C ++D+ +L+E EK+ + + +MIS YSQ S +AL +F
Sbjct: 83 YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFA 142
Query: 280 EMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGG 339
EM + P + T T+L +C + L G+Q+H L++K + ++FV S+L+DMY+K G
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 202
Query: 340 DIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAIL 399
I EAR + + ++ V T +I GYAQ G EALE+F RL +E ++P+++ + ++L
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE-GMSPNYVTYASLL 261
Query: 400 TACNHAGFLEKG 411
TA + L+ G
Sbjct: 262 TALSGLALLDHG 273
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 149/293 (50%), Gaps = 12/293 (4%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+++S+ + AL + M R KP++ T L+SC +A LG QIH +V+ Y
Sbjct: 125 ISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY 184
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ ++F+ S+L+D YAK I +AR++F + D VS T++IAG++ G +A +F
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
+ + PN T S+++A G L H H HV++R + SL+D Y+ C
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLA-LLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 303
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMR-QKKFSPTDHTLCTIL 297
+ + L + E+ I +N+M+ YS++ + L+LF MR +K+ P TL +L
Sbjct: 304 NLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 298 NACS------SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
+ CS + ++ +G K G+E +VDM + G IDEA
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH----YGCIVDMLGRAGRIDEA 412
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 187 bits (476), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 190/357 (53%), Gaps = 10/357 (2%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
++ + +N + +L LL+ M P+ TAL + + +H ++++ Y
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY 278
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ + L+ Y + + DA KVF M +D V W+ +IA F NG +A LF
Sbjct: 279 VLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR 338
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCS----TLHAHVVKRGFRTSNFVICSLVDCY 234
M + PN FTL+S+++ C A+ CS LH VVK GF +V +L+D Y
Sbjct: 339 MREAFVVPNEFTLSSILNGC-----AIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY 393
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
A C+++D ++ L E S K+ + +N++I Y G A +F E + + S T+ T
Sbjct: 394 AKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFS 453
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+ L AC+SLAS+ G QVH L IK + + V V+++L+DMY+K GDI A+ V ++
Sbjct: 454 SALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI 513
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ W +I GY+ G G +AL + D ++ +R+ P+ + F +L+ C++AG +++G
Sbjct: 514 DVASWNALISGYSTHGLGRQALRILD-IMKDRDCKPNGLTFLGVLSGCSNAGLIDQG 569
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 153/307 (49%), Gaps = 3/307 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I + +N + A+DL M P++ L + L+ CA + LG Q+H +V+ G+
Sbjct: 320 IARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGF 379
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ ++++S+AL+D YAKC + A K+F + ++VSW ++I G+ G+G AF +F+E
Sbjct: 380 DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
L + T +S + AC ++ +H +K V SL+D YA C
Sbjct: 440 ALRNQVSVTEVTFSSALGACASLA-SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCG 498
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
I + + NE D +N++IS YS + AL++ M+ + P T +L+
Sbjct: 499 DIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLS 558
Query: 299 ACSSLASLIEGRQ-VHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
CS+ + +G++ S++ G E + + +V + + G +D+A +++ + +V
Sbjct: 559 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSV 618
Query: 358 L-WTTMI 363
+ W M+
Sbjct: 619 MIWRAML 625
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 147/298 (49%), Gaps = 14/298 (4%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
IH +++ G +LF ++ L++ Y K DA +F M + VS+ +L G++
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC--- 127
Query: 169 GRDAFLLFKEM--LGTHIKPNCFT--LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
+D L+ + G + P+ FT L +S D + C LH+ +VK G+ ++
Sbjct: 128 -QDPIGLYSRLHREGHELNPHVFTSFLKLFVSL-----DKAEICPWLHSPIVKLGYDSNA 181
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
FV +L++ Y+ C +D + + KD +V+ ++S Y +N D+L+L MR
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
F P ++T T L A L + + VH ++K + V L+ +Y++ GD+ +A
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
V ++ + V W+ MI + Q+G EA++LF R + E + P+ ++IL C
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR-MREAFVVPNEFTLSSILNGC 358
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 5/212 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + +A + R ++ +AL +CA + LG+Q+H ++
Sbjct: 418 NTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIK 477
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ + +S++L+D YAKC I A+ VF M+ D SW +LI+G+S +G GR A +
Sbjct: 478 TNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRI 537
Query: 176 FKEMLGTHIKPNCFTLTSVISAC--VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
M KPN T V+S C G D Q C + + G +V
Sbjct: 538 LDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQEC--FESMIRDHGIEPCLEHYTCMVRL 595
Query: 234 YANCKQIDDSLLLLNETS-EKDTIVYNSMISA 264
Q+D ++ L+ E +++ +M+SA
Sbjct: 596 LGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 100/215 (46%), Gaps = 5/215 (2%)
Query: 193 SVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSE 252
+++ C+ + D + +H ++K+G F L++ Y D+L L +E E
Sbjct: 54 AMLRRCIQKNDPIS-AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPE 112
Query: 253 KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV 312
++ + + ++ Y+ C D + L+ + ++ H + L SL +
Sbjct: 113 RNNVSFVTLAQGYA---CQ-DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWL 168
Query: 313 HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRG 372
HS ++K+G + N FV +AL++ YS G +D AR V + K+ V+W ++ Y ++G
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 373 LEALELFDRLLTERELTPDHIYFTAILTACNHAGF 407
++L+L + + ++ + TA+ + F
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 178/344 (51%), Gaps = 4/344 (1%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
++ L M R + P L SCA G Q+H ++ + G E F+ +AL+
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVS--WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPN 187
Y KC + DARKVF Q+S + +LI+G++AN + DA +F+ M T + +
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 188 CFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLL 247
T+ ++ C + L +LH VK G + V+ S + Y C ++ L
Sbjct: 156 SVTMLGLVPLCT-VPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 248 NETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI 307
+E K I +N++IS YSQN + D L+L+ +M+ P TL ++L++C+ L +
Sbjct: 215 DEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKK 274
Query: 308 EGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYA 367
G +V LV G NVFV++A + MY++ G++ +AR V D VK+ V WT MI Y
Sbjct: 275 IGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYG 334
Query: 368 QSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
G G L LFD ++ +R + PD F +L+AC+H+G +KG
Sbjct: 335 MHGMGEIGLMLFDDMI-KRGIRPDGAVFVMVLSACSHSGLTDKG 377
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 158/354 (44%), Gaps = 20/354 (5%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ ++ N+ A + M + + C LG +H V+
Sbjct: 125 NALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK 184
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G + + + ++ + Y KC ++ R++F M V ++W ++I+G+S NG D L
Sbjct: 185 GGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLEL 244
Query: 176 FKEMLGTHIKPNCFTLTSVISAC--VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
+++M + + P+ FTL SV+S+C +G K L V GF + FV + +
Sbjct: 245 YEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKL---VESNGFVPNVFVSNASISM 301
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
YA C + + + + K + + +MI Y + L LF +M ++ P
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361
Query: 294 CTILNACSSLASLIEGRQVHSLV-----IKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
+L+ACS +G ++ + ++ G E S LVD+ + G +DEA +
Sbjct: 362 VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH----YSCLVDLLGRAGRLDEAMEFI 417
Query: 349 DQTSVK-NNVLWTTMIMGYAQSGRGLEALEL-FDRLLTERELTPDHIYFTAILT 400
+ V+ + +W + +G + + ++ EL F +++ E P++I + +++
Sbjct: 418 ESMPVEPDGAVWGAL-LGACKIHKNVDMAELAFAKVI---EFEPNNIGYYVLMS 467
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 162/286 (56%), Gaps = 2/286 (0%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
+++V Y + + DA K+F+ M + +SWT++I G N + +A LFK ML IK
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL 245
T VI+AC A +H ++K GF +V SL+ YANCK+I DS
Sbjct: 223 STSRPFTCVITAC-ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRK 281
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
+ +E + V+ +++S YS N DAL +F M + P T + LN+CS+L +
Sbjct: 282 VFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGT 341
Query: 306 LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMG 365
L G+++H + +K+G E + FV ++LV MYS G++++A V + K+ V W ++I+G
Sbjct: 342 LDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVG 401
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
AQ GRG A +F +++ + PD I FT +L+AC+H GFLEKG
Sbjct: 402 CAQHGRGKWAFVIFGQMIRLNK-EPDEITFTGLLSACSHCGFLEKG 446
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 162/307 (52%), Gaps = 12/307 (3%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
+N + ALDL M R K + +++CA A +H+G+Q+H +++ G+ +
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 124 LSSALVDFYAKCFAIVDARKVFRAMKVHDQVS-WTSLIAGFSANGQGRDAFLLFKEMLGT 182
+S++L+ FYA C I D+RKVF KVH+QV+ WT+L++G+S N + DA +F ML
Sbjct: 262 VSASLITFYANCKRIGDSRKVFDE-KVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
I PN T S +++C L +H VK G T FV SLV Y++ ++D
Sbjct: 321 SILPNQSTFASGLNSCSAL-GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVND 379
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
++ + + +K + +NS+I +Q+ A +F +M + P + T +L+ACS
Sbjct: 380 AVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSH 439
Query: 303 LASLIEGRQVHSLVIKMGS-----ERNVFVASALVDMYSKGGDIDEARFVLDQTSVK-NN 356
L +GR+ L M S +R + + +VD+ + G + EA ++++ VK N
Sbjct: 440 CGFLEKGRK---LFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNE 496
Query: 357 VLWTTMI 363
++W ++
Sbjct: 497 MVWLALL 503
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 10/288 (3%)
Query: 124 LSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
L + ++ Y + +VDA +F M V D VSW S+I+G G A LF EM
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM---- 123
Query: 184 IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
+ + + T++++ C Q + VK S+V Y ++DD+
Sbjct: 124 PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDA 178
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL 303
L L + K+ I + +MI QN SG+AL LF M + T ++ AC++
Sbjct: 179 LKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Query: 304 ASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMI 363
+ G QVH L+IK+G +V+++L+ Y+ I ++R V D+ + +WT ++
Sbjct: 239 PAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALL 298
Query: 364 MGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
GY+ + + +AL +F +L + P+ F + L +C+ G L+ G
Sbjct: 299 SGYSLNKKHEDALSIFSGML-RNSILPNQSTFASGLNSCSALGTLDWG 345
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 79/140 (56%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
++ +S N + AL + +GM R + P++S + L+SC+ G ++H V+ G
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGL 357
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E + F+ ++LV Y+ + DA VF + VSW S+I G + +G+G+ AF++F +
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQ 417
Query: 179 MLGTHIKPNCFTLTSVISAC 198
M+ + +P+ T T ++SAC
Sbjct: 418 MIRLNKEPDEITFTGLLSAC 437
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
++ID++ + N+ +Y MI+ Y+++ DAL LF EM + + + +
Sbjct: 49 RRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCV 108
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
C + + ++ L +M ER+V +A+V+ + G +D+A + Q VK+
Sbjct: 109 E-CGDMNTAVK------LFDEM-PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 358 LWTTMIMGYAQSGRGLEALELFDRL 382
W +M+ GY Q G+ +AL+LF ++
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQM 185
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 201/389 (51%), Gaps = 35/389 (8%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N H+ ++ AL L M L P+ L SCAK++ + G QIH ++++
Sbjct: 103 NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 116 SGYEDNLFLSSALVDFYA---------------------------KCFA----IVDARKV 144
G + +L++ ++L+ Y K +A I +A+K+
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F + V D VSW ++I+G++ G ++A LFK+M+ T+++P+ T+ +V+SAC Q +
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC-AQSGS 281
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
++ +H + GF ++ ++ +L+D Y+ C +++ + L KD I +N++I
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM--GSE 322
Y+ +AL LF EM + +P D T+ +IL AC+ L ++ GR +H + K G
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ ++L+DMY+K GDI+ A V + K+ W MI G+A GR + +LF R
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR- 460
Query: 383 LTERELTPDHIYFTAILTACNHAGFLEKG 411
+ + + PD I F +L+AC+H+G L+ G
Sbjct: 461 MRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 136/259 (52%), Gaps = 3/259 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +++ + AL+L M + +P +S + T +S+CA++ + LG Q+H ++
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G+ NL + +AL+D Y+KC + A +F + D +SW +LI G++ ++A LL
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKR--GFRTSNFVICSLVDC 233
F+EML + PN T+ S++ AC A+ +H ++ KR G ++ + SL+D
Sbjct: 355 FQEMLRSGETPNDVTMLSILPAC-AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
YA C I+ + + N K +N+MI ++ + + + LF MR+ P D T
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 294 CTILNACSSLASLIEGRQV 312
+L+ACS L GR +
Sbjct: 474 VGLLSACSHSGMLDLGRHI 492
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 160/340 (47%), Gaps = 42/340 (12%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCF------AIVDARKVFRAMKVHDQVSWTSLIAG 162
IHA +++ G + + S L++F C + A VF+ ++ + + W ++ G
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEF---CILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 163 FSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRT 222
+ + A L+ M+ + PN +T V+ +C K A + +H HV+K G
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSK-AFKEGQQIHGHVLKLGCDL 167
Query: 223 SNFVICSLVDCYANCKQIDDS-------------------------------LLLLNETS 251
+V SL+ Y +++D+ L +E
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 252 EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQ 311
KD + +N+MIS Y++ +AL+LF +M + P + T+ T+++AC+ S+ GRQ
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 312 VHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGR 371
VH + G N+ + +AL+D+YSK G+++ A + ++ K+ + W T+I GY
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 372 GLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
EAL LF +L E TP+ + +IL AC H G ++ G
Sbjct: 348 YKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIG 386
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 194/381 (50%), Gaps = 7/381 (1%)
Query: 33 VSDAKNFLCRQFFIKKFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCT 92
++DA+ R F+ N IT +N A++ M R P L +
Sbjct: 365 IADAR----RVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 93 ALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHD 152
+LSSCA + LG QIH ++ G + N+ +S+AL+ YA+ + + RK+F +M HD
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 480
Query: 153 QVSWTSLIAGFSANGQG-RDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTL 211
QVSW S+I + + + +A + F K N T +SV+SA + +
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG-ELGKQI 539
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK-DTIVYNSMISAYSQNLC 270
H +K +L+ CY C ++D + + +E+ D + +NSMIS Y N
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599
Query: 271 SGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASA 330
AL L M Q T+L+A +S+A+L G +VH+ ++ E +V V SA
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659
Query: 331 LVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTP 390
LVDMYSK G +D A + V+N+ W +MI GYA+ G+G EAL+LF+ + + + P
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719
Query: 391 DHIYFTAILTACNHAGFLEKG 411
DH+ F +L+AC+HAG LE+G
Sbjct: 720 DHVTFVGVLSACSHAGLLEEG 740
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 167/333 (50%), Gaps = 11/333 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGL--QIHAYL 113
N I+ +S+ A + + M ++P++ + +++ + L QI +
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 114 VRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
+SG +LF+ S LV +AK ++ ARKVF M+ + V+ L+ G G +A
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 174 LLFKEMLG-THIKPNCFT--LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC-- 228
LF +M + P + L+S + ++ L+ +H HV+ G +F++
Sbjct: 295 KLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL--VDFMVGIG 352
Query: 229 -SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
LV+ YA C I D+ + ++KD++ +NSMI+ QN C +A++ + MR+
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P TL + L++C+SL G+Q+H +K+G + NV V++AL+ +Y++ G ++E R +
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGL-EALELF 379
+ V W ++I A+S R L EA+ F
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 145/289 (50%), Gaps = 10/289 (3%)
Query: 110 HAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQG 169
H+ L ++ + +++L + L++ Y + V ARKVF M + + VSW +++G+S NG+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 170 RDAFLLFKEMLGTHIKPNCFTLTSVISAC--VGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
++A + ++M+ I N + SV+ AC +G L +H + K + V
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL-FGRQIHGLMFKLSYAVDAVVS 142
Query: 228 CSLVDCYANC-KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
L+ Y C + +L + K+++ +NS+IS YSQ A ++F M+
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 287 SPTDHTLCTILNACSSLAS----LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDID 342
PT++T +++ SL L+E Q+ + K G ++FV S LV ++K G +
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 343 EARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPD 391
AR V +Q +N V +++G + G EA +LF + + +++P+
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE 309
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 166/353 (47%), Gaps = 10/353 (2%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHL--GLQIHAYLVRS 116
++ +S+N AL L M + ++ + L +C + + + G QIH + +
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133
Query: 117 GYEDNLFLSSALVDFYAKCFAIVD-ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
Y + +S+ L+ Y KC V A F ++V + VSW S+I+ +S G R AF +
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193
Query: 176 FKEMLGTHIKPNCFTLTSVI-SACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
F M +P +T S++ +AC + ++ + + K G T FV LV +
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK-KFSPTDHTL 293
A + + + N+ ++ + N ++ + +A +LF++M SP + +
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI 313
Query: 294 CTILNACSSLA---SLIEGRQVHSLVIKMG-SERNVFVASALVDMYSKGGDIDEARFVLD 349
SLA L +GR+VH VI G + V + + LV+MY+K G I +AR V
Sbjct: 314 LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY 373
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
+ K++V W +MI G Q+G +EA+E + + + ++ P + L++C
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERY-KSMRRHDILPGSFTLISSLSSC 425
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 130/264 (49%), Gaps = 5/264 (1%)
Query: 104 HLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVF-RAMKVHDQVSWTSLIAG 162
LG QIH +++ D +AL+ Y KC + K+F R + D V+W S+I+G
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 163 FSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRT 222
+ N A L ML T + + F +V+SA L+ +HA V+ +
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA-FASVATLERGMEVHACSVRACLES 652
Query: 223 SNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMR 282
V +LVD Y+ C ++D +L N +++ +NSMIS Y+++ +AL+LF M+
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 283 QKKFSPTDH-TLCTILNACSSLASLIEG-RQVHSLVIKMGSERNVFVASALVDMYSKGGD 340
+P DH T +L+ACS L EG + S+ G + S + D+ + G+
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 341 IDEARFVLDQTSVKNNVL-WTTMI 363
+D+ +++ +K NVL W T++
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVL 796
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 104/220 (47%), Gaps = 7/220 (3%)
Query: 187 NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLL 246
NC L S + +CVG + A + H+ + K ++ +L++ Y + +
Sbjct: 3 NCVPL-SFVQSCVGHRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKV 58
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS- 305
+E ++ + + ++S YS+N +AL +M ++ + ++L AC + S
Sbjct: 59 FDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
Query: 306 -LIEGRQVHSLVIKMGSERNVFVASALVDMYSKG-GDIDEARFVLDQTSVKNNVLWTTMI 363
++ GRQ+H L+ K+ + V++ L+ MY K G + A VKN+V W ++I
Sbjct: 119 GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSII 178
Query: 364 MGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
Y+Q+G A +F + + ++ + + + TAC+
Sbjct: 179 SVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 310 RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQS 369
R HS + K +++V++ + L++ Y + GD AR V D+ ++N V W ++ GY+++
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 370 GRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
G EAL +F R + + + + F ++L AC G
Sbjct: 81 GEHKEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 185/369 (50%), Gaps = 19/369 (5%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I +S + + D+AL M R P L +C+ R+ G +H ++V+
Sbjct: 76 NSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVK 135
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G+E N+++S+ L+ Y C + +VF + + V+W SLI+GF N + DA
Sbjct: 136 TGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEA 195
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTS-------NFVIC 228
F+EM +K N + ++ AC KD + H + GF N ++
Sbjct: 196 FREMQSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYFQSKVGFNVILA 254
Query: 229 -SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
SL+D YA C + + L + E+ + +NS+I+ YSQN + +AL +F++M +
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 288 PTDHTLCTILNA-----CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDID 342
P T +++ A CS L G+ +H+ V K G ++ + ALV+MY+K GD +
Sbjct: 315 PDKVTFLSVIRASMIQGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAE 369
Query: 343 EARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
A+ + K+ + WT +I+G A G G EAL +F R+ + TPD I + +L AC
Sbjct: 370 SAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429
Query: 403 NHAGFLEKG 411
+H G +E+G
Sbjct: 430 SHIGLVEEG 438
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD---ARKVFRAMKVHDQVSWTSLIAGFS 164
Q+H +++S N+ S L+DF C ++ AR VF ++ W S+I G+S
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
+ A + ++EML P+ FT V+ AC G +D +Q S +H VVK GF +
Sbjct: 84 NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRD-IQFGSCVHGFVVKTGFEVNM 142
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
+V L+ Y C +++ L + + + + + + S+IS + N DA++ F EM+
Sbjct: 143 YVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER--------NVFVASALVDMYS 336
+ + +L AC ++ G+ H + +G + NV +A++L+DMY+
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 337 KGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFT 396
K GD+ AR++ D + V W ++I GY+Q+G EAL +F +L + + PD + F
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML-DLGIAPDKVTFL 321
Query: 397 AILTA 401
+++ A
Sbjct: 322 SVIRA 326
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 168/354 (47%), Gaps = 27/354 (7%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ N A++ M K +++++ L +C + ++ G H +L G+
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 119 ED--------NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGR 170
+ N+ L+++L+D YAKC + AR +F M VSW S+I G+S NG
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTL----HAHVVKRGFRTSNFV 226
+A +F +ML I P+ T SVI A + +Q CS L HA+V K GF +
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASM-----IQGCSQLGQSIHAYVSKTGFVKDAAI 354
Query: 227 ICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK-K 285
+C+LV+ YA + + + +KDTI + +I + + +AL +F M++K
Sbjct: 355 VCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 414
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM-GSERNVFVASALVDMYSKGGDIDEA 344
+P T +L ACS + + EG++ + + + G E V +VD+ S+ G +EA
Sbjct: 415 ATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEA 474
Query: 345 RFVLDQTSVKNNV-LWTTMIMGYAQSGRGLEALELFDR---LLTERELTPDHIY 394
++ VK NV +W ++ G E LEL DR ++ E E IY
Sbjct: 475 ERLVKTMPVKPNVNIWGALLNGCDIH----ENLELTDRIRSMVAEPEELGSGIY 524
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 12/228 (5%)
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M+ H KP + S + C +L + LH ++K + + L+D C
Sbjct: 1 MMKKHYKP----ILSQLENC----RSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCP 52
Query: 239 Q---IDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
+ + + + ++NSMI YS + AL + EM +K +SP T
Sbjct: 53 ETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 112
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+L ACS L + G VH V+K G E N++V++ L+ MY G+++ V + N
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN 172
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
V W ++I G+ + R +A+E F R + + + +L AC
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAF-REMQSNGVKANETIMVDLLVACG 219
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 205/384 (53%), Gaps = 11/384 (2%)
Query: 35 DAKNFLCRQFFIKKFSGKTFE-NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTA 93
D+K + RQ F + T N I+ ++ T A+ L M +L + L
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM-KVHD 152
+++C + L Q+H + V G++ +++A V +Y+K + +A VF M ++ D
Sbjct: 147 IAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 153 QVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLH 212
+VSW S+I + + +G A L+KEM+ K + FTL SV++A + D L H
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA-LTSLDHLIGGRQFH 263
Query: 213 AHVVKRGFRTSNFVICSLVDCYANCKQID---DSLLLLNETSEKDTIVYNSMISAYSQNL 269
++K GF ++ V L+D Y+ C D DS + E D +V+N+MIS YS N
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 270 -CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN-VFV 327
S +A++ F +M++ P D + + +ACS+L+S + +Q+H L IK N + V
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 328 ASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERE 387
+AL+ +Y K G++ +AR+V D+ N V + MI GYAQ G G EAL L+ R+L +
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRML-DSG 442
Query: 388 LTPDHIYFTAILTACNHAGFLEKG 411
+ P+ I F A+L+AC H G +++G
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEG 466
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 151/291 (51%), Gaps = 9/291 (3%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E N+F + +V YAK I AR++F + D VS+ +LI+G++ + A +LFK
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M + + FTL+ +I+AC + D ++ LH V GF + + V + V Y+
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQ---LHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 239 QIDDSLLLLNETSE-KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+ +++ + E +D + +NSMI AY Q+ AL L+ EM K F TL ++L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDID---EARFVLDQTSVK 354
NA +SL LI GRQ H +IK G +N V S L+D YSK G D ++ V +
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 355 NNVLWTTMIMGYAQSGR-GLEALELFDRLLTERELTPDHIYFTAILTACNH 404
+ V+W TMI GY+ + EA++ F R + PD F + +AC++
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSF-RQMQRIGHRPDDCSFVCVTSACSN 357
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 145/317 (45%), Gaps = 12/317 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + ++ +AL L M K L + L++ + G Q H L++
Sbjct: 209 NSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK 268
Query: 116 SGYEDNLFLSSALVDFYAKCFA---IVDARKVFRAMKVHDQVSWTSLIAGFSANGQ-GRD 171
+G+ N + S L+DFY+KC + D+ KVF+ + D V W ++I+G+S N + +
Sbjct: 269 AGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEE 328
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC-SL 230
A F++M +P+ + V SAC Q C +H +K ++ + +L
Sbjct: 329 AVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ-CKQIHGLAIKSHIPSNRISVNNAL 387
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
+ Y + D+ + + E + + +N MI Y+Q+ +AL L+ M +P
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 291 HTLCTILNACSSLASLIEGRQVHSLV---IKMGSERNVFVASALVDMYSKGGDIDEARFV 347
T +L+AC+ + EG++ + + K+ E + S ++D+ + G ++EA
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY--SCMIDLLGRAGKLEEAERF 505
Query: 348 LDQTSVK-NNVLWTTMI 363
+D K +V W ++
Sbjct: 506 IDAMPYKPGSVAWAALL 522
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 188/356 (52%), Gaps = 6/356 (1%)
Query: 59 ITKHSKNASTDRALDLLT--GMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRS 116
I S + +R L L M R PS+ L + K R+ + Q HA++V+
Sbjct: 74 IGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKF 132
Query: 117 GYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLF 176
G + + F+ ++L+ Y+ A ++F + D V+WT++I GF NG +A + F
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 177 KEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG-FRTSNFVICSLVDCYA 235
EM T + N T+ SV+ A G+ + ++ ++H ++ G + F+ SLVD Y
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAA-GKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYG 251
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C DD+ + +E ++ + + ++I+ Y Q+ C + +F EM + +P + TL +
Sbjct: 252 KCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSS 311
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+L+AC+ + +L GR+VH +IK E N + L+D+Y K G ++EA V ++ KN
Sbjct: 312 VLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKN 371
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
WT MI G+A G +A +LF +L+ ++P+ + F A+L+AC H G +E+G
Sbjct: 372 VYTWTAMINGFAAHGYARDAFDLFYTMLSS-HVSPNEVTFMAVLSACAHGGLVEEG 426
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 156/303 (51%), Gaps = 4/303 (1%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG-YEDNL 122
+N S A+ M + ++ + + L + K + G +H + +G + ++
Sbjct: 181 RNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDV 240
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
F+ S+LVD Y KC DA+KVF M + V+WT+LIAG+ + L+F+EML +
Sbjct: 241 FIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS 300
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
+ PN TL+SV+SAC AL +H +++K + +L+D Y C +++
Sbjct: 301 DVAPNEKTLSSVLSAC-AHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEE 359
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
++L+ EK+ + +MI+ ++ + + DA LF M SP + T +L+AC+
Sbjct: 360 AILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAH 419
Query: 303 LASLIEGRQVH-SLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK-NNVLWT 360
+ EGR++ S+ + E + +VD++ + G ++EA+ ++++ ++ NV+W
Sbjct: 420 GGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWG 479
Query: 361 TMI 363
+
Sbjct: 480 ALF 482
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 179/328 (54%), Gaps = 2/328 (0%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK 143
KP + + L +C R+ L I+ Y++++G+ + + L+D YAKC ++ AR
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD 203
VF +M+ D VSW S+I+G+ +G +A LFK M+ + + T +IS D
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
L+ LH++ +K G V +L+D YA C ++ DSL + + DT+ +N++IS
Sbjct: 424 -LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
A + LQ+ +MR+ + P T L C+SLA+ G+++H +++ G E
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
+ + +AL++MYSK G ++ + V ++ S ++ V WT MI Y G G +ALE F +
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD-M 601
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
+ + PD + F AI+ AC+H+G +++G
Sbjct: 602 EKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 205/417 (49%), Gaps = 26/417 (6%)
Query: 17 SGSLRLPDLRHLHAFPVS---DAKNFLCRQFFIKKFS-------------------GKTF 54
S S L +LR +HA +S D+ +F + I K+S
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKL-IDKYSHFREPASSLSVFRRVSPAKNVYL 73
Query: 55 ENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I SKN AL+ + P K + + +CA + +G ++ ++
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
G+E +LF+ +ALVD Y++ + AR+VF M V D VSW SLI+G+S++G +A
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
++ E+ + I P+ FT++SV+ A G ++ LH +K G + V LV Y
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPA-FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
++ D+ + +E +D++ YN+MI Y + +++++F+E +F P T+
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVS 311
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
++L AC L L + +++ ++K G V + L+D+Y+K GD+ AR V + K
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ V W ++I GY QSG +EA++LF ++ E DHI + +++ L+ G
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKFG 427
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 120/218 (55%), Gaps = 2/218 (0%)
Query: 195 ISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSE-K 253
IS + L +HA V+ G +S+F L+D Y++ ++ SL + S K
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 254 DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVH 313
+ ++NS+I A+S+N +AL+ + ++R+ K SP +T +++ AC+ L G V+
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 314 SLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGL 373
++ MG E ++FV +ALVDMYS+ G + AR V D+ V++ V W ++I GY+ G
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 374 EALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
EALE++ L + PD +++L A + +++G
Sbjct: 190 EALEIYHE-LKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 167/347 (48%), Gaps = 3/347 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +S + + AL++ + P + + L + G +H + ++
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
SG + +++ LV Y K DAR+VF M V D VS+ ++I G+ ++ +
Sbjct: 236 SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM 295
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F E L KP+ T++SV+ AC +D L ++ +++K GF + V L+D YA
Sbjct: 296 FLENL-DQFKPDLLTVSSVLRACGHLRD-LSLAKYIYNYMLKAGFVLESTVRNILIDVYA 353
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C + + + N KDT+ +NS+IS Y Q+ +A++LF M + T
Sbjct: 354 KCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLM 413
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+++ + LA L G+ +HS IK G ++ V++AL+DMY+K G++ ++ + +
Sbjct: 414 LISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD 473
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
V W T+I + G L++ + + + E+ PD F L C
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQ-MRKSEVVPDMATFLVTLPMC 519
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
L + T M + P + L CA LG +IH L+R GYE L + +AL++
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
Y+KC + ++ +VF M D V+WT +I + G+G A F +M + I P+
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 191 LTSVISAC 198
++I AC
Sbjct: 613 FIAIIYAC 620
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 187/357 (52%), Gaps = 6/357 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
++ H N +L L + M R P++ T L +C GLQIH + ++ G+
Sbjct: 79 MSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF 138
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E + + ++LVD Y+KC I +A KVFR + +SW ++IAGF G G A F
Sbjct: 139 EMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGM 198
Query: 179 MLGTHIK--PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFR--TSNFVICSLVDCY 234
M +IK P+ FTLTS++ AC + +H +V+ GF +S + SLVD Y
Sbjct: 199 MQEANIKERPDEFTLTSLLKAC-SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLY 257
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
C + + ++ EK I ++S+I Y+Q +A+ LF +++ L
Sbjct: 258 VKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALS 317
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+I+ + A L +G+Q+ +L +K+ S V +++VDMY K G +DEA + +K
Sbjct: 318 SIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK 377
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ + WT +I GY + G G +++ +F +L + PD + + A+L+AC+H+G +++G
Sbjct: 378 DVISWTVVITGYGKHGLGKKSVRIFYEML-RHNIEPDEVCYLAVLSACSHSGMIKEG 433
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 159/297 (53%), Gaps = 5/297 (1%)
Query: 90 LCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK 149
L + L C + G Q+H YL++SG NL S+ L+D Y KC + A KVF +M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 150 VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
+ VSW++L++G NG + + LF EM I PN FT ++ + AC G +AL+
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC-GLLNALEKGL 127
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
+H +K GF V SLVD Y+ C +I+++ + ++ I +N+MI+ +
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 270 CSGDALQLFVEMRQK--KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG--SERNV 325
AL F M++ K P + TL ++L ACSS + G+Q+H +++ G +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 326 FVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ +LVD+Y K G + AR DQ K + W+++I+GYAQ G +EA+ LF RL
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 11/302 (3%)
Query: 70 RALDLLTGMNR--LTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYE--DNLFLS 125
+ALD M + +P + L + L +C+ + G QIH +LVRSG+ + ++
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
+LVD Y KC + ARK F +K +SW+SLI G++ G+ +A LFK + + +
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVK--RGFRTSNFVICSLVDCYANCKQIDDS 243
+ F L+S+I L+ + A VK G TS V+ S+VD Y C +D++
Sbjct: 311 IDSFALSSIIGV-FADFALLRQGKQMQALAVKLPSGLETS--VLNSVVDMYLKCGLVDEA 367
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL 303
E KD I + +I+ Y ++ ++++F EM + P + +L+ACS
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 304 ASLIEGRQVHSLVIKM-GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV-LWTT 361
+ EG ++ S +++ G + V + +VD+ + G + EA+ ++D +K NV +W T
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 362 MI 363
++
Sbjct: 488 LL 489
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 16/230 (6%)
Query: 190 TLTSVISACVGQKDALQHCSTLHAHVVKRG----FRTSNFVICSLVDCYANCKQIDDSLL 245
L S++ C +K +H +++K G TSN+ L+D Y C++ +
Sbjct: 8 NLVSILRVCT-RKGLSDQGGQVHCYLLKSGSGLNLITSNY----LIDMYCKCREPLMAYK 62
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
+ + E++ + +++++S + N +L LF EM ++ P + T T L AC L +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 306 LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMG 365
L +G Q+H +K+G E V V ++LVDMYSK G I+EA V + ++ + W MI G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 366 YAQSGRGLEALELFDRL----LTERELTPDHIYFTAILTACNHAGFLEKG 411
+ +G G +AL+ F + + ER PD T++L AC+ G + G
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKER---PDEFTLTSLLKACSSTGMIYAG 229
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 192/341 (56%), Gaps = 18/341 (5%)
Query: 78 MNRLTAKPSK---SVLCTALSSCAKARNWHLGLQIHAYLVRSGYED-NLFLSSALVDFYA 133
M R +P++ S+L +L +C + G QIH + SG NL + ++++D Y
Sbjct: 127 MQRWEIRPTEFTFSIL-ASLVTCVRH-----GEQIHGNAICSGVSRYNLVVWNSVMDMYR 180
Query: 134 KCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGR---DAFLLFKEMLGTHIKPNCFT 190
+ A VF M+ D VSW LI S +G D F L +EM I+P+ +T
Sbjct: 181 RLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREM---EIQPDEYT 237
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNET 250
++ V+S C ++ + L A +K GF +++ V+ + +D ++ C ++DDS+ L E
Sbjct: 238 VSMVVSICSDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
Query: 251 SEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGR 310
+ D+++ NSMI +YS + C DAL+LF+ + P T ++L++ +++ L G
Sbjct: 297 EKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGA 355
Query: 311 QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSG 370
VHSLVIK+G + + VA++L++MY K G +D A V +T K+ + W T+IMG A++
Sbjct: 356 DVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNS 415
Query: 371 RGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
R +E+L +F++LL + L PD + IL AC +AGF+ +G
Sbjct: 416 RAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEG 456
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 139/273 (50%), Gaps = 7/273 (2%)
Query: 140 DARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACV 199
+A +F M D VSW ++I+G + G +F +M I+P FT S++++ V
Sbjct: 88 NALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF-SILASLV 146
Query: 200 GQKDALQHCSTLHAHVVKRGFRTSNFVIC-SLVDCYANCKQIDDSLLLLNETSEKDTIVY 258
++H +H + + G N V+ S++D Y D +L + ++D + +
Sbjct: 147 ---TCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSW 203
Query: 259 NSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK 318
N +I + S + AL F MR+ + P ++T+ +++ CS L L +G+Q +L IK
Sbjct: 204 NCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIK 263
Query: 319 MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
MG N V A +DM+SK +D++ + + ++VL +MI Y+ G +AL L
Sbjct: 264 MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRL 323
Query: 379 FDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
F +T+ + PD F+++L++ N A L+ G
Sbjct: 324 FILAMTQ-SVRPDKFTFSSVLSSMN-AVMLDHG 354
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 146/294 (49%), Gaps = 12/294 (4%)
Query: 63 SKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNL 122
S + + + ALD M + +P + + +S C+ R G Q A ++ G+ N
Sbjct: 211 SDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNS 270
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
+ A +D ++KC + D+ K+FR ++ D V S+I +S + G DA LF +
Sbjct: 271 IVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQ 330
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
++P+ FT +SV+S+ L H + +H+ V+K GF V SL++ Y +D
Sbjct: 331 SVRPDKFTFSSVLSSM--NAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDL 388
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE-MRQKKFSPTDHTLCTILNACS 301
++ + +T KD I +N++I ++N + ++L +F + + + P TL IL AC
Sbjct: 389 AMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACC 448
Query: 302 SLASLIEGRQVHSLV-----IKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
+ EG Q+ S + + G+E + ++++ + G I+EA+ + D+
Sbjct: 449 YAGFVNEGIQIFSSMEKAHGVNPGNEH----YACIIELLCRVGMINEAKDIADK 498
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Query: 240 IDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNA 299
++++L L +E E+D + +N+MIS +++F +M++ + PT+ T
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF------ 139
Query: 300 CSSLASLI----EGRQVHSLVIKMGSER-NVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
S LASL+ G Q+H I G R N+ V ++++DMY + G D A V +
Sbjct: 140 -SILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ V W +I+ + SG AL+ F L+ E E+ PD + +++ C+ L KG
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQF-WLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 189/347 (54%), Gaps = 6/347 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ +K+ AL L M P++ + + SCA R+ G ++H ++++G+
Sbjct: 96 ISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF 155
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E N + S+L D Y+KC +A ++F +++ D +SWT +I+ + R+A + E
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSE 215
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M+ + PN FT ++ A L+ T+H++++ RG + + SLVD Y+
Sbjct: 216 MVKAGVPPNEFTFVKLLGAS--SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+++D++ +LN + E+D ++ S++S + +NL + +A+ F+EMR P + T IL+
Sbjct: 274 KMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK--GGDIDEARFVLDQTSVKNN 356
CS++ SL G+Q+HS IK+G E + V +ALVDMY K +++ +R V N
Sbjct: 334 LCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR-VFGAMVSPNV 392
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
V WTT+I+G G + L ++ +RE+ P+ + + +L AC+
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMV-KREVEPNVVTLSGVLRACS 438
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 181/352 (51%), Gaps = 9/352 (2%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
+N A+ M L +P+ LS C+ R+ G QIH+ ++ G+ED+
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 124 LSSALVDFYAKCFAI-VDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
+ +ALVD Y KC A V+A +VF AM + VSWT+LI G +G +D F L EM+
Sbjct: 362 VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCS---TLHAHVVKRGFRTSNFVICSLVDCYANCKQ 239
++PN TL+ V+ AC L+H +HA++++R V SLVD YA+ ++
Sbjct: 422 EVEPNVVTLSGVLRAC----SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRK 477
Query: 240 IDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNA 299
+D + ++ +D I Y S+++ +++ AL + M +L ++A
Sbjct: 478 VDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA 537
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLW 359
++L +L G+ +H +K G V ++LVDMYSK G +++A+ V ++ + + V W
Sbjct: 538 SANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSW 597
Query: 360 TTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ G A +G AL F+ + +E PD + F +L+AC++ + G
Sbjct: 598 NGLVSGLASNGFISSALSAFEEMRM-KETEPDSVTFLILLSACSNGRLTDLG 648
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 172/321 (53%), Gaps = 3/321 (0%)
Query: 91 CTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKV 150
C + S ++ + +GL IH +++ G +NL L + L+ Y K I +ARK+F M
Sbjct: 27 CIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 151 HDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCST 210
+WT +I+ F+ + + A LF+EM+ + PN FT +SV+ +C G +D + +
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD-ISYGGR 145
Query: 211 LHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLC 270
+H V+K GF ++ V SL D Y+ C Q ++ L + DTI + MIS+
Sbjct: 146 VHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARK 205
Query: 271 SGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASA 330
+ALQ + EM + P + T +L A SS L G+ +HS +I G NV + ++
Sbjct: 206 WREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTS 264
Query: 331 LVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTP 390
LVD YS+ +++A VL+ + ++ LWT+++ G+ ++ R EA+ F + + L P
Sbjct: 265 LVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRS-LGLQP 323
Query: 391 DHIYFTAILTACNHAGFLEKG 411
++ ++AIL+ C+ L+ G
Sbjct: 324 NNFTYSAILSLCSAVRSLDFG 344
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 6/288 (2%)
Query: 74 LLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYA 133
LL M + +P+ L L +C+K R+ L+IHAYL+R + + + ++LVD YA
Sbjct: 414 LLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYA 473
Query: 134 KCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTS 193
+ A V R+MK D +++TSL+ F+ G+ A + M G I+ + +L
Sbjct: 474 SSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPG 533
Query: 194 VISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK 253
ISA AL+ LH + VK GF + V+ SLVD Y+ C ++D+ + E +
Sbjct: 534 FISAS-ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP 592
Query: 254 DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS--LASL-IEGR 310
D + +N ++S + N AL F EMR K+ P T +L+ACS+ L L +E
Sbjct: 593 DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF 652
Query: 311 QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
QV + + + +V LV + + G ++EA V++ +K N +
Sbjct: 653 QVMKKIYNIEPQVEHYV--HLVGILGRAGRLEEATGVVETMHLKPNAM 698
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
+T+ ++ + AL ++ M + + L +S+ A G +H Y V+SG+
Sbjct: 500 VTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGF 559
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ ++LVD Y+KC ++ DA+KVF + D VSW L++G ++NG A F+E
Sbjct: 560 SGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEE 619
Query: 179 MLGTHIKPNCFTLTSVISAC 198
M +P+ T ++SAC
Sbjct: 620 MRMKETEPDSVTFLILLSAC 639
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 187/348 (53%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
+T +S+N +A++ + R + ++ + L++CA +G+Q+H +V+SG+
Sbjct: 199 LTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGF 258
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ N+++ SAL+D YAKC + AR + M+V D VSW S+I G G +A +F
Sbjct: 259 KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGR 318
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M +K + FT+ S+++ + ++ S+ H +VK G+ T V +LVD YA
Sbjct: 319 MHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRG 378
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+D +L + EKD I + ++++ + N +AL+LF MR +P ++L+
Sbjct: 379 IMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
A + L L G+QVH IK G ++ V ++LV MY+K G +++A + + +++ +
Sbjct: 439 ASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLIT 498
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
WT +I+GYA++G +A FD + T +TP ++ ++ +G
Sbjct: 499 WTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSG 546
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 171/331 (51%), Gaps = 34/331 (10%)
Query: 101 RNWHLGLQ-----IHAYLVRSGYEDNLFLS--------------------------SALV 129
R W L L+ IH+Y R+ NL L + ++
Sbjct: 7 RKWRLPLKPFGSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMI 66
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
Y+ + DA K+FR+ V + +SW +LI+G+ +G +AF LF EM IKPN +
Sbjct: 67 VAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEY 126
Query: 190 TLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
TL SV+ C L+ +H H +K GF V+ L+ YA CK+I ++ L
Sbjct: 127 TLGSVLRMCTSLVLLLRG-EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFET 185
Query: 250 -TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
EK+ + + SM++ YSQN + A++ F ++R++ +T ++L AC+S+++
Sbjct: 186 MEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRV 245
Query: 309 GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQ 368
G QVH ++K G + N++V SAL+DMY+K +++ AR +L+ V + V W +MI+G +
Sbjct: 246 GVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAIL 399
G EAL +F R + ER++ D +IL
Sbjct: 306 QGLIGEALSMFGR-MHERDMKIDDFTIPSIL 335
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 184/359 (51%), Gaps = 6/359 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + K+ S A +L M KP++ L + L C G QIH + ++
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK 153
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH-DQVSWTSLIAGFSANGQGRDAFL 174
+G++ ++ + + L+ YA+C I +A +F M+ + V+WTS++ G+S NG A
Sbjct: 154 TGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIE 213
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
F+++ + N +T SV++AC A + +H +VK GF+T+ +V +L+D Y
Sbjct: 214 CFRDLRREGNQSNQYTFPSVLTAC-ASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMY 272
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
A C++++ + LL D + +NSMI + G+AL +F M ++ D T+
Sbjct: 273 AKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIP 332
Query: 295 TILNACSSLA--SLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
+ILN C +L+ + H L++K G V +ALVDMY+K G +D A V +
Sbjct: 333 SILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMI 391
Query: 353 VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
K+ + WT ++ G +G EAL+LF + +TPD I ++L+A LE G
Sbjct: 392 EKDVISWTALVTGNTHNGSYDEALKLFCNMRVG-GITPDKIVTASVLSASAELTLLEFG 449
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 181/321 (56%), Gaps = 5/321 (1%)
Query: 93 ALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHD 152
A S+ + + LG Q H ++ ++ E + + ++L+ Y++C ++ + VF +M+ D
Sbjct: 324 AASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERD 383
Query: 153 QVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLH 212
VSW ++I+ F NG + +L EM K + T+T+++SA ++ + H
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNK-EIGKQTH 442
Query: 213 AHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNET--SEKDTIVYNSMISAYSQNLC 270
A ++++G + + L+D Y+ I S L + +E+D +NSMIS Y+QN
Sbjct: 443 AFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Query: 271 SGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASA 330
+ +F +M ++ P T+ +IL ACS + S+ G+Q+H I+ ++NVFVASA
Sbjct: 502 TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASA 561
Query: 331 LVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTP 390
LVDMYSK G I A + QT +N+V +TTMI+GY Q G G A+ LF + E + P
Sbjct: 562 LVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLS-MQESGIKP 620
Query: 391 DHIYFTAILTACNHAGFLEKG 411
D I F A+L+AC+++G +++G
Sbjct: 621 DAITFVAVLSACSYSGLIDEG 641
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 158/316 (50%), Gaps = 13/316 (4%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +N D L L+ M + K + LS+ + RN +G Q HA+L+R
Sbjct: 388 NTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIR 447
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRA--MKVHDQVSWTSLIAGFSANGQGRDAF 173
G + ++S L+D Y+K I ++K+F DQ +W S+I+G++ NG F
Sbjct: 448 QGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTF 506
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
L+F++ML +I+PN T+ S++ AC Q ++ LH +++ + FV +LVD
Sbjct: 507 LVFRKMLEQNIRPNAVTVASILPAC-SQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDM 565
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y+ I + + ++T E++++ Y +MI Y Q+ A+ LF+ M++ P T
Sbjct: 566 YSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITF 625
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASA----LVDMYSKGGDIDEARFVLD 349
+L+ACS + EG ++ +M N+ +S + DM + G ++EA +
Sbjct: 626 VAVLSACSYSGLIDEGLKIFE---EMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVK 682
Query: 350 QTSVKNNV--LWTTMI 363
+ N+ LW +++
Sbjct: 683 GLGEEGNIAELWGSLL 698
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 186/403 (46%), Gaps = 16/403 (3%)
Query: 15 PPSGSLRLPDLRHLHAFPVSDAKNFLCRQFF--IKKFSGKTFENDCITKHSKNASTDRAL 72
PP+ + + P +R + D L RQ F I K + N I N AL
Sbjct: 32 PPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPT-TVLWNTIIIGFICNNLPHEAL 90
Query: 73 DLLTGMNRLTAKPS--KSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
+ M + + + L +CA+ +N G +H +L+R + + ++L++
Sbjct: 91 LFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMN 150
Query: 131 FYAKCFAIVD------ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
Y C D RKVF M+ + V+W +LI+ + G+ +A F M+ +
Sbjct: 151 MYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV 210
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG--FRTSNFVICSLVDCYANCKQIDD 242
KP+ + +V A V +++ + + ++K G + FV+ S + YA I+
Sbjct: 211 KPSPVSFVNVFPA-VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIES 269
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE-MRQKKFSPTDHTLCTILNACS 301
S + + E++ V+N+MI Y QN C ++++LF+E + K+ + T +A S
Sbjct: 270 SRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTT 361
+L + GRQ H V K E + + ++L+ MYS+ G + ++ V ++ V W T
Sbjct: 330 ALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389
Query: 362 MIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
MI + Q+G E L L + ++ D+I TA+L+A ++
Sbjct: 390 MISAFVQNGLDDEGLMLVYE-MQKQGFKIDYITVTALLSAASN 431
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 180/356 (50%), Gaps = 2/356 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N IT + K+ ++ L M + +PS L + ++ LG Q+HA V
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G+ + + + ++DFY+K +++ R +F M D VS+ +I+ +S Q +
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F+EM F +++S +LQ LH + + V SLVD YA
Sbjct: 339 FREMQCMGFDRRNFPFATMLS-IAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C+ +++ L+ ++ T+ + ++IS Y Q G L+LF +MR T T
Sbjct: 398 KCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFAT 457
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+L A +S ASL+ G+Q+H+ +I+ G+ NVF S LVDMY+K G I +A V ++ +N
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 517
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V W +I +A +G G A+ F +++ E L PD + +LTAC+H GF+E+G
Sbjct: 518 AVSWNALISAHADNGDGEAAIGAFAKMI-ESGLQPDSVSILGVLTACSHCGFVEQG 572
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 169/345 (48%), Gaps = 8/345 (2%)
Query: 62 HSKNASTDRALDLLTGMNRLTA--KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYE 119
+++N+ D A L M R ++ P T L C A + Q+HA+ V+ G++
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 120 DNLFL--SSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
N FL S+ L+ Y + + A +F + D V++ +LI G+ +G ++ LF
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKD-ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYAN 236
+M + +P+ FT + V+ A VG D AL LHA V GF V ++D Y+
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ--QLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 237 CKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTI 296
++ ++ +L +E E D + YN +IS+YSQ +L F EM+ F + T+
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 297 LNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN 356
L+ ++L+SL GRQ+H + ++ + V ++LVDMY+K +EA + +
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
V WT +I GY Q G L+LF ++ L D F +L A
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGS-NLRADQSTFATVLKA 461
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 137/268 (51%), Gaps = 9/268 (3%)
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML 180
N ++ ++ + K + AR +F AM V+WT L+ ++ N +AF LF++M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 181 GTH--IKPNCFTLTSVISACVGQKDALQH--CSTLHAHVVKRGFRTSNFVICS--LVDCY 234
+ P+ T T+++ C DA+ +HA VK GF T+ F+ S L+ Y
Sbjct: 138 RSSSCTLPDHVTFTTLLPGC---NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+++D + +L E EKD++ +N++I+ Y ++ +++ LF++MRQ P+D T
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+L A L G+Q+H+L + G R+ V + ++D YSK + E R + D+
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ V + +I Y+Q+ + +L F +
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREM 342
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 151/312 (48%), Gaps = 7/312 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +S+ + +L M + T LS A + +G Q+H +
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ + L + ++LVD YAKC +A +F+++ VSWT+LI+G+ G L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F +M G++++ + T +V+ A +L LHA +++ G + F LVD YA
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFA-SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C I D++ + E +++ + +N++ISA++ N A+ F +M + P ++
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558
Query: 296 ILNACSSLASLIEGR---QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
+L ACS + +G Q S + + ++ + + ++D+ + G EA ++D+
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY--ACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 353 VK-NNVLWTTMI 363
+ + ++W++++
Sbjct: 617 FEPDEIMWSSVL 628
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+N + ++ + K GD+ AR + D + V WT ++ YA++ EA +LF ++
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 383 LTERELT-PDHIYFTAILTACNHA 405
T PDH+ FT +L CN A
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDA 160
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 177/371 (47%), Gaps = 2/371 (0%)
Query: 41 CRQFFIKKFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKA 100
CR F F IT L + M+R AL +CA
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 101 RNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLI 160
R G IH +++ G+ L ++++L Y +C + D +F M D VSWTSLI
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 161 AGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF 220
+ GQ A F +M + + PN T S+ SAC L LH +V+ G
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC-ASLSRLVWGEQLHCNVLSLGL 341
Query: 221 RTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE 280
S V S++ Y+ C + + +L +D I ++++I Y Q + + F
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW 401
Query: 281 MRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGD 340
MRQ PTD L ++L+ ++A + GRQVH+L + G E+N V S+L++MYSK G
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 341 IDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILT 400
I EA + +T + V T MI GYA+ G+ EA++LF++ L + PD + F ++LT
Sbjct: 462 IKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSL-KVGFRPDSVTFISVLT 520
Query: 401 ACNHAGFLEKG 411
AC H+G L+ G
Sbjct: 521 ACTHSGQLDLG 531
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 187/373 (50%), Gaps = 5/373 (1%)
Query: 42 RQFFIKKFSGKTFENDCITKHSKNAS-TDRALDLLTGMNRL--TAKPSKSVLCTALSSCA 98
RQ F K G I K A+ +D AL L + M + P SVL L +C
Sbjct: 60 RQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACG 119
Query: 99 KARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTS 158
++ N G +HAY V++ ++++ S+L+D Y + I + +VF M + V+WT+
Sbjct: 120 QSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTA 179
Query: 159 LIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKR 218
+I G G+ ++ F EM + + +T + AC G + +++ +H HV+ R
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ-VKYGKAIHTHVIVR 238
Query: 219 GFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF 278
GF T+ V SL Y C ++ D L L SE+D + + S+I AY + A++ F
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 279 VEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKG 338
++MR + P + T ++ +AC+SL+ L+ G Q+H V+ +G ++ V+++++ MYS
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 339 GDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAI 398
G++ A + ++ + W+T+I GY Q+G G E + F + + P ++
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFS-WMRQSGTKPTDFALASL 417
Query: 399 LTACNHAGFLEKG 411
L+ + +E G
Sbjct: 418 LSVSGNMAVIEGG 430
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 167/353 (47%), Gaps = 20/353 (5%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I + + +A++ M P++ + S+CA G Q+H ++ G
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL 341
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
D+L +S++++ Y+ C +V A +F+ M+ D +SW+++I G+ G G + F F
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW 401
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M + KP F L S++S G ++ +HA + G ++ V SL++ Y+ C
Sbjct: 402 MRQSGTKPTDFALASLLSVS-GNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCG 460
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
I ++ ++ ET D + +MI+ Y+++ S +A+ LF + + F P T ++L
Sbjct: 461 SIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLT 520
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASA----LVDMYSKGGDIDEARFVLDQTSVK 354
AC+ L G ++ M N+ A +VD+ + G + +A ++++ S K
Sbjct: 521 ACTHSGQLDLGFHYFNM---MQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWK 577
Query: 355 -NNVLWTTMIMGYAQSG---RGLEALELFDRLLTERELTPDHIYFTAILTACN 403
++V+WTT+++ G RG R ER L D TA++T N
Sbjct: 578 KDDVVWTTLLIACKAKGDIERG--------RRAAERILELDPTCATALVTLAN 622
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 140/265 (52%), Gaps = 6/265 (2%)
Query: 141 ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEM--LGTHIKPNCFTLTSVISAC 198
AR+VF M D VSWTS+I + +A +LF M + + P+ L+ V+ AC
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 199 VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVY 258
GQ + + +LHA+ VK +S +V SL+D Y +ID S + +E ++ + +
Sbjct: 119 -GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTW 177
Query: 259 NSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI 317
++I+ + L F EM R ++ S T +T L AC+ L + G+ +H+ VI
Sbjct: 178 TAIITGLVHAGRYKEGLTYFSEMSRSEELSDT-YTFAIALKACAGLRQVKYGKAIHTHVI 236
Query: 318 KMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALE 377
G + VA++L MY++ G++ + + + S ++ V WT++I+ Y + G+ ++A+E
Sbjct: 237 VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVE 296
Query: 378 LFDRLLTERELTPDHIYFTAILTAC 402
F ++ ++ P+ F ++ +AC
Sbjct: 297 TFIKMRNS-QVPPNEQTFASMFSAC 320
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 184/330 (55%), Gaps = 7/330 (2%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYE-DNLFLSSALVDFYAKCFAIVDAR 142
+P + + L +C + +G +H + +R G++ ++F+ ++L+D Y+K F + A
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 282
Query: 143 KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK 202
+VF + VSW S++AGF N + +A +F M+ ++ + T+ S++ C +
Sbjct: 283 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
L C ++H +++RG+ ++ + SL+D Y +C +DD+ +L+ + KD + ++MI
Sbjct: 343 QPLP-CKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMI 401
Query: 263 SAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE 322
S + S +A+ +F MR +P T+ ++LNACS A L + H + I+
Sbjct: 402 SGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLA 458
Query: 323 RN-VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDR 381
N + V +++VD Y+K G I+ AR DQ + KN + WT +I YA +G +AL LFD
Sbjct: 459 INDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDE 518
Query: 382 LLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ ++ TP+ + + A L+ACNH G ++KG
Sbjct: 519 -MKQKGYTPNAVTYLAALSACNHGGLVKKG 547
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 173/322 (53%), Gaps = 10/322 (3%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK 143
+P+ S L + +C W G +IH Y++RSG+ + ++++ YA ++ ARK
Sbjct: 124 EPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARK 180
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML-GTHIKPNCFTLTSVISACVGQK 202
+F M D +SW+ +I + + + LFKEM+ +P+C T+TSV+ AC +
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVIC-SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSM 261
D + ++H ++RGF ++ +C SL+D Y+ +D + + +ET+ ++ + +NS+
Sbjct: 241 D-IDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSI 299
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
++ + N +AL++F M Q+ + T+ ++L C + + +H ++I+ G
Sbjct: 300 LAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGY 359
Query: 322 ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDR 381
E N S+L+D Y+ +D+A VLD + K+ V +TMI G A +GR EA+ +F
Sbjct: 360 ESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCH 419
Query: 382 LLTERELTPDHIYFTAILTACN 403
+ TP+ I ++L AC+
Sbjct: 420 MRD----TPNAITVISLLNACS 437
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 147/284 (51%), Gaps = 7/284 (2%)
Query: 122 LFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
LF +++ DFY KC + + F M D VSW ++ G G + F ++
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
+PN TL VI AC + +H +V++ GF + V S++ YA+ +
Sbjct: 121 WGFEPNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL- 176
Query: 242 DSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNAC 300
+ L +E SE+D I ++ +I +Y Q+ L+LF EM + K P T+ ++L AC
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 301 SSLASLIEGRQVHSLVIKMGSE-RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLW 359
+ + + GR VH I+ G + +VFV ++L+DMYSKG D+D A V D+T+ +N V W
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 360 TTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
+++ G+ + R EALE+F L+ + + D + ++L C
Sbjct: 297 NSILAGFVHNQRYDEALEMF-HLMVQEAVEVDEVTVVSLLRVCK 339
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 5/281 (1%)
Query: 65 NASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFL 124
N D AL++ M + + + + + L C IH ++R GYE N
Sbjct: 306 NQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVA 365
Query: 125 SSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
S+L+D Y C + DA V +M D VS +++I+G + G+ +A +F M T
Sbjct: 366 LSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT-- 423
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI-CSLVDCYANCKQIDDS 243
PN T+ S+++AC D L+ H ++R ++ + S+VD YA C I+ +
Sbjct: 424 -PNAITVISLLNACSVSAD-LRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMA 481
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL 303
++ +EK+ I + +ISAY+ N AL LF EM+QK ++P T L+AC+
Sbjct: 482 RRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHG 541
Query: 304 ASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
+ +G + +++ + ++ S +VDM S+ G+ID A
Sbjct: 542 GLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTA 582
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 166/304 (54%), Gaps = 1/304 (0%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
Q+HA+L+ +GY + L + L+ AI +F ++ + D + S+I S
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLR 86
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
++ ML +++ P+ +T TSVI +C AL+ +H H V GF +V
Sbjct: 87 LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC-ADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
+LV Y+ C ++ + + + EK + +NS++S + QN + +A+Q+F +MR+ F
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P T ++L+AC+ ++ G VH +I G + NV + +AL+++YS+ GD+ +AR V
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGF 407
D+ N WT MI Y G G +A+ELF+++ + P+++ F A+L+AC HAG
Sbjct: 266 FDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGL 325
Query: 408 LEKG 411
+E+G
Sbjct: 326 VEEG 329
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 158/319 (49%), Gaps = 17/319 (5%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
PS + + SCA +G +H + V SG+ + ++ +ALV FY+KC + AR+V
Sbjct: 105 PSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV 164
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F M V+W SL++GF NG +A +F +M + +P+ T S++SAC Q A
Sbjct: 165 FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSAC-AQTGA 223
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
+ S +H +++ G + + +L++ Y+ C + + + ++ E + + +MISA
Sbjct: 224 VSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISA 283
Query: 265 YSQNLCSGDALQLFVEMRQK-KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM---- 319
Y + A++LF +M P + T +L+AC+ + EGR V+ + K
Sbjct: 284 YGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLI 343
Query: 320 -GSERNVFVASALVDMYSKGGDIDEA-RFV--LDQTS-VKNNVLWTTMIMGYAQSGRGLE 374
G E +V +VDM + G +DEA +F+ LD T LWT M +G + R +
Sbjct: 344 PGVEHHV----CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAM-LGACKMHRNYD 398
Query: 375 -ALELFDRLLTERELTPDH 392
+E+ RL+ P H
Sbjct: 399 LGVEIAKRLIALEPDNPGH 417
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 192 TSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS 251
++ A V ++ +HAH++ G+ S ++ L+ + + I + LL
Sbjct: 9 SAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVP 68
Query: 252 EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQ 311
D ++NS+I + S+ + + M SP+++T +++ +C+ L++L G+
Sbjct: 69 LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 312 VHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGR 371
VH + G + +V +ALV YSK GD++ AR V D+ K+ V W +++ G+ Q+G
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 372 GLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
EA+++F + + E PD F ++L+AC G + G
Sbjct: 189 ADEAIQVFYQ-MRESGFEPDSATFVSLLSACAQTGAVSLG 227
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N ++ +N D A+ + M +P + + LS+CA+ LG +H Y++
Sbjct: 177 NSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIIS 236
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G + N+ L +AL++ Y++C + AR+VF MK + +WT++I+ + +G G+ A L
Sbjct: 237 EGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVEL 296
Query: 176 FKEMLGT-HIKPNCFTLTSVISAC 198
F +M PN T +V+SAC
Sbjct: 297 FNKMEDDCGPIPNNVTFVAVLSAC 320
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 169/328 (51%), Gaps = 6/328 (1%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P +C K G QIH + + G+ D++++ ++LV FY C +A KV
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKV 163
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F M V D VSWT +I GF+ G ++A F +M ++PN T V+ + G+
Sbjct: 164 FGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSS-GRVGC 219
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
L +H ++KR S +L+D Y C+Q+ D++ + E +KD + +NSMIS
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 265 YSQNLCSGDALQLFVEMRQKK-FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
S +A+ LF M+ P H L ++L+AC+SL ++ GR VH ++ G +
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
+ + +A+VDMY+K G I+ A + + KN W ++ G A G GLE+L F+ ++
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
+ P+ + F A L AC H G +++G
Sbjct: 400 -KLGFKPNLVTFLAALNACCHTGLVDEG 426
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 148/305 (48%), Gaps = 13/305 (4%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
IT ++ ALD + M+ +P+ + L S + LG IH +++
Sbjct: 179 ITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRAS 235
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+L +AL+D Y KC + DA +VF ++ D+VSW S+I+G + ++A LF
Sbjct: 236 LISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSL 295
Query: 179 M-LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
M + IKP+ LTSV+SAC A+ H +H +++ G + + ++VD YA C
Sbjct: 296 MQTSSGIKPDGHILTSVLSAC-ASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKC 354
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
I+ +L + N K+ +N+++ + + ++L+ F EM + F P T L
Sbjct: 355 GYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAAL 414
Query: 298 NACSSLASLIEGRQVHSLVIKMGS-ERNVFVA----SALVDMYSKGGDIDEARFVLDQTS 352
NAC + EGR+ KM S E N+F ++D+ + G +DEA ++
Sbjct: 415 NACCHTGLVDEGRRYFH---KMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP 471
Query: 353 VKNNV 357
VK +V
Sbjct: 472 VKPDV 476
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 150/330 (45%), Gaps = 11/330 (3%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLV-RSGYEDNLFLSSALVDFYAKC--FAIVDA 141
P KSVL +S C+ R + QI L+ R D+L ++ +V F K FA +
Sbjct: 4 PEKSVLLELISRCSSLRVFK---QIQTQLITRDLLRDDLIINK-VVTFLGKSADFASYSS 59
Query: 142 RKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQ 201
+ V S+ +L++ ++ + R +K + P+ FT V AC G+
Sbjct: 60 VILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKAC-GK 118
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSM 261
++ +H V K GF +V SLV Y C + ++ + E +D + + +
Sbjct: 119 FSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGI 178
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
I+ +++ +AL F +M P T +L + + L G+ +H L++K S
Sbjct: 179 ITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRAS 235
Query: 322 ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDR 381
++ +AL+DMY K + +A V + K+ V W +MI G R EA++LF
Sbjct: 236 LISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSL 295
Query: 382 LLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ T + PD T++L+AC G ++ G
Sbjct: 296 MQTSSGIKPDGHILTSVLSACASLGAVDHG 325
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 191/343 (55%), Gaps = 8/343 (2%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYE-DNLFLSSALV 129
+L L M + KP + +AL +C+ + +G +IH + VRS E ++ + ++++
Sbjct: 215 SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSIL 274
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH-IKPNC 188
D Y+K + A ++F M + V+W +I ++ NG+ DAFL F++M + ++P+
Sbjct: 275 DMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDV 334
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
T +++ A A+ T+H + ++RGF + +L+D Y C Q+ + ++ +
Sbjct: 335 ITSINLLPA-----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFD 389
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
+EK+ I +NS+I+AY QN + AL+LF E+ P T+ +IL A + SL E
Sbjct: 390 RMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSE 449
Query: 309 GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQ 368
GR++H+ ++K N + ++LV MY+ GD+++AR + +K+ V W ++IM YA
Sbjct: 450 GREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAV 509
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
G G ++ LF ++ R + P+ F ++L AC+ +G +++G
Sbjct: 510 HGFGRISVWLFSEMIASR-VNPNKSTFASLLAACSISGMVDEG 551
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 8/308 (2%)
Query: 106 GLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSA 165
G +IHA +++ G+ ++++ ++L+ Y K DA KVF M D VSW S+I+G+ A
Sbjct: 149 GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLA 208
Query: 166 NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN- 224
G G + +LFKEML KP+ F+ S + AC + + +H H V+ T +
Sbjct: 209 LGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC-SHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQ 283
V+ S++D Y+ ++ + + N +++ + +N MI Y++N DA F +M Q
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 284 KKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDE 343
P T +L A ++++EGR +H ++ G ++ + +AL+DMY + G +
Sbjct: 328 NGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 344 ARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
A + D+ + KN + W ++I Y Q+G+ ALELF L + L PD +IL A
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW-DSSLVPDSTTIASILPAYA 442
Query: 404 HAGFLEKG 411
+ L +G
Sbjct: 443 ESLSLSEG 450
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 79/143 (55%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + +N AL+L + + P + + + L + A++ + G +IHAY+V+
Sbjct: 400 NSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK 459
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
S Y N + ++LV YA C + DARK F + + D VSW S+I ++ +G GR + L
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWL 519
Query: 176 FKEMLGTHIKPNCFTLTSVISAC 198
F EM+ + + PN T S+++AC
Sbjct: 520 FSEMIASRVNPNKSTFASLLAAC 542
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 1/171 (0%)
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
+A+ + ++D+L L +E ++ D ++N MI ++ +A+Q + M T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
++ + + ++SL EG+++H++VIK+G +V+V ++L+ +Y K G +A V ++
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
++ V W +MI GY G G +L LF +L + PD + L AC+H
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEML-KCGFKPDRFSTMSALGACSH 243
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 187/387 (48%), Gaps = 42/387 (10%)
Query: 58 CITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG 117
C T S+N +AL L M P++ + L + + G QIH L+++G
Sbjct: 289 CATAKSENPL--KALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
E + L +AL+DFYAKC + D+R F ++ + V W +L++G+ AN G LF
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY-ANKDGPICLSLFL 405
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
+ML +P +T ++ + +C + LH+ +V+ G+ +++V+ SL+ YA
Sbjct: 406 QMLQMGFRPTEYTFSTALKSC-----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKN 460
Query: 238 KQIDDSLLLLNETS--------------------------------EKDTIVYNSMISAY 265
+ ++D+LLLL+ S + DT+ +N I+A
Sbjct: 461 QLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAAC 520
Query: 266 SQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG-SERN 324
S++ + ++LF M Q P +T +IL+ CS L L G +H L+ K S +
Sbjct: 521 SRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCAD 580
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
FV + L+DMY K G I V ++T KN + WT +I G G EALE F L+
Sbjct: 581 TFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLS 640
Query: 385 ERELTPDHIYFTAILTACNHAGFLEKG 411
PD + F +ILTAC H G +++G
Sbjct: 641 -LGFKPDRVSFISILTACRHGGMVKEG 666
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 163/350 (46%), Gaps = 10/350 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I +SK D+A + + M P++S + + L SCA + + G Q+H ++
Sbjct: 84 NTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTV-SGLLSCA-SLDVRAGTQLHGLSLK 141
Query: 116 SG-YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
G + + F+ + L+ Y + + A +VF M +W +++ G ++
Sbjct: 142 YGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMF 201
Query: 175 LFKEM--LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD 232
F+E+ +G + + F +CV D + LH K+G V+ SL+
Sbjct: 202 FFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQ---LHCSATKKGLDCEISVVNSLIS 258
Query: 233 CYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
Y C + + + D + +N++I A +++ AL+LFV M + FSP T
Sbjct: 259 AYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGT 318
Query: 293 LCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
++L S + L GRQ+H ++IK G E + + +AL+D Y+K G+++++R D
Sbjct: 319 YVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR 378
Query: 353 VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
KN V W ++ GYA G L LF ++L + P F+ L +C
Sbjct: 379 DKNIVCWNALLSGYANK-DGPICLSLFLQML-QMGFRPTEYTFSTALKSC 426
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 143/328 (43%), Gaps = 39/328 (11%)
Query: 72 LDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDF 131
L L M ++ +P++ TAL SC Q+H+ +VR GYEDN ++ S+L+
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCCVTELQ----QLHSVIVRMGYEDNDYVLSSLMRS 456
Query: 132 YAKCFAIVDAR--------------------------------KVFRAMKVHDQVSWTSL 159
YAK + DA K+ ++ D VSW
Sbjct: 457 YAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIA 516
Query: 160 IAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG 219
IA S + + LFK ML ++I+P+ +T S++S C D L S++H + K
Sbjct: 517 IAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCD-LTLGSSIHGLITKTD 575
Query: 220 FRTSNFVICS-LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF 278
F ++ +C+ L+D Y C I + + ET EK+ I + ++IS + +AL+ F
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 279 VEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKG 338
E F P + +IL AC + EG + + G E + VD+ ++
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARN 695
Query: 339 GDIDEARFVLDQTSVKNNV-LWTTMIMG 365
G + EA ++ + + +W T + G
Sbjct: 696 GYLKEAEHLIREMPFPADAPVWRTFLDG 723
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I S++ + ++L M + +P K + LS C+K + LG IH + +
Sbjct: 514 NIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITK 573
Query: 116 SGYE-DNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+ + + F+ + L+D Y KC +I KVF + + ++WT+LI+ +G G++A
Sbjct: 574 TDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALE 633
Query: 175 LFKEMLGTHIKPNCFTLTSVISAC 198
FKE L KP+ + S+++AC
Sbjct: 634 KFKETLSLGFKPDRVSFISILTAC 657
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 136/310 (43%), Gaps = 9/310 (2%)
Query: 94 LSSCAKARNWHLGLQIHAYLVR--SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH 151
L+ C KA ++ +HA + S +++ + ++ Y K + A KVF M
Sbjct: 19 LNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPER 78
Query: 152 DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVIS-ACVGQKDALQHCST 210
++VS+ ++I G+S G A+ +F EM PN T++ ++S A + + Q
Sbjct: 79 NKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQ---- 134
Query: 211 LHAHVVKRG-FRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
LH +K G F FV L+ Y ++ + + + K +N M+S
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
+ + F E+ + S T+ + +L S + L +Q+H K G + + V +
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254
Query: 330 ALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELT 389
+L+ Y K G+ A + + V W +I A+S L+AL+LF + E +
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS-MPEHGFS 313
Query: 390 PDHIYFTAIL 399
P+ + ++L
Sbjct: 314 PNQGTYVSVL 323
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 174/328 (53%), Gaps = 3/328 (0%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P++ + ++L +C+ G QIH ++S N +L D YA+C + AR+V
Sbjct: 268 PNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRV 327
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F ++ D SW +IAG + NG +A +F +M + P+ +L S++ A + A
Sbjct: 328 FDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT-KPMA 386
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE-TSEKDTIVYNSMIS 263
L +H++++K GF V SL+ Y C + L + + D++ +N++++
Sbjct: 387 LSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILT 446
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
A Q+ + L+LF M + P T+ +L C ++SL G QVH +K G
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP 506
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
F+ + L+DMY+K G + +AR + D ++ V W+T+I+GYAQSG G EAL LF +
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
+ + P+H+ F +LTAC+H G +E+G
Sbjct: 567 SAG-IEPNHVTFVGVLTACSHVGLVEEG 593
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 164/321 (51%), Gaps = 7/321 (2%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
+ +C+ +R+ G +IH +++ S + + L++ ++ Y KC ++ DAR+VF M +
Sbjct: 74 ICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNL 133
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
VS+TS+I G+S NGQG +A L+ +ML + P+ F S+I AC D + LHA
Sbjct: 134 VSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSD-VGLGKQLHA 192
Query: 214 HVVKRGFRTSNFVIC--SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCS 271
V+K +S+ +I +L+ Y Q+ D+ + KD I ++S+I+ +SQ
Sbjct: 193 QVIK--LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 272 GDALQLFVEMRQ-KKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASA 330
+AL EM F P ++ + L ACSSL G Q+H L IK N +
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCS 310
Query: 331 LVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTP 390
L DMY++ G ++ AR V DQ + W +I G A +G EA+ +F ++ + P
Sbjct: 311 LCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG-FIP 369
Query: 391 DHIYFTAILTACNHAGFLEKG 411
D I ++L A L +G
Sbjct: 370 DAISLRSLLCAQTKPMALSQG 390
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 173/355 (48%), Gaps = 4/355 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
IT +S+N A+ L M + P + + + +CA + + LG Q+HA +++
Sbjct: 140 ITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 199
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+L +AL+ Y + + DA +VF + + D +SW+S+IAGFS G +A KE
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 259
Query: 179 MLGTHI-KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
ML + PN + S + AC + S +H +K + CSL D YA C
Sbjct: 260 MLSFGVFHPNEYIFGSSLKACSSLLRP-DYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
++ + + ++ DT +N +I+ + N + +A+ +F +MR F P +L ++L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNN 356
A + +L +G Q+HS +IK G ++ V ++L+ MY+ D+ D + ++
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V W T++ Q + +E L LF +L+ E PDHI +L C L+ G
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLF-KLMLVSECEPDHITMGNLLRGCVEISSLKLG 492
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 154/314 (49%), Gaps = 10/314 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + N D A+ + + M P L + L + K G+QIH+Y+++
Sbjct: 340 NVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK 399
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH-DQVSWTSLIAGFSANGQGRDAFL 174
G+ +L + ++L+ Y C + +F + + D VSW +++ + Q +
Sbjct: 400 WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLR 459
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
LFK ML + +P+ T+ +++ CV + +L+ S +H + +K G F+ L+D Y
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCV-EISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
A C + + + + +D + ++++I Y+Q+ +AL LF EM+ P T
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVA----SALVDMYSKGGDIDEARFVLDQ 350
+L ACS + + EG ++++ M +E + S +VD+ ++ G ++EA +D+
Sbjct: 579 GVLTACSHVGLVEEGLKLYA---TMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 351 TSVKNN-VLWTTMI 363
++ + V+W T++
Sbjct: 636 MKLEPDVVVWKTLL 649
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 111/214 (51%), Gaps = 1/214 (0%)
Query: 190 TLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
T S+I AC + +L +H H++ + + ++ Y C + D+ + +
Sbjct: 69 TYISLICACSSSR-SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 250 TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEG 309
E++ + Y S+I+ YSQN +A++L+++M Q+ P +I+ AC+S + + G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 310 RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQS 369
+Q+H+ VIK+ S ++ +AL+ MY + + +A V +K+ + W+++I G++Q
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 370 GRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
G EAL +L+ P+ F + L AC+
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 102/185 (55%), Gaps = 7/185 (3%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK 143
+P + L C + + LG Q+H Y +++G F+ + L+D YAKC ++ AR+
Sbjct: 470 EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARR 529
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC--VG- 200
+F +M D VSW++LI G++ +G G +A +LFKEM I+PN T V++AC VG
Sbjct: 530 IFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGL 589
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS-EKDTIVYN 259
++ L+ +T+ + G + +VD A +++++ ++E E D +V+
Sbjct: 590 VEEGLKLYATMQ---TEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWK 646
Query: 260 SMISA 264
+++SA
Sbjct: 647 TLLSA 651
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 181/354 (51%), Gaps = 3/354 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I + + D A+ L M R+ KP+ L + L CA LG IH Y +++
Sbjct: 373 IASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADI 432
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E L ++A++ YAKC A K F + + D V++ +L G++ G AF ++K
Sbjct: 433 ESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN 492
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M + P+ T+ ++ C D + S ++ ++K GF + V +L++ + C
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARG-SCVYGQIIKHGFDSECHVAHALINMFTKCD 551
Query: 239 QIDDSLLLLNETS-EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+ +++L ++ EK T+ +N M++ Y + + +A+ F +M+ +KF P T I+
Sbjct: 552 ALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIV 611
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
A + L++L G VHS +I+ G V ++LVDMY+K G I+ + + S K V
Sbjct: 612 RAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIV 671
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W TM+ YA G A+ LF + E EL PD + F ++L+AC HAG +E+G
Sbjct: 672 SWNTMLSAYAAHGLASCAVSLFLS-MQENELKPDSVSFLSVLSACRHAGLVEEG 724
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 176/354 (49%), Gaps = 7/354 (1%)
Query: 51 GKTFENDCITKHSKNASTDRALDLLTGMNRLTA-KPSKSVLCTALSSCAKARNWHLGLQI 109
G N I +++ AL M+ P K AL +CA + ++ GL+I
Sbjct: 63 GVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRI 122
Query: 110 HAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQG 169
H + G E ++++ +ALV+ Y K +V AR+VF M V D V+W ++++G + NG
Sbjct: 123 HDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCS 182
Query: 170 RDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS 229
A LLF +M + + +L ++I A V + + C LH V+K+GF F S
Sbjct: 183 SAALLLFHDMRSCCVDIDHVSLYNLIPA-VSKLEKSDVCRCLHGLVIKKGFI---FAFSS 238
Query: 230 -LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSP 288
L+D Y NC + + + E KD + +M++AY+ N + L+LF MR
Sbjct: 239 GLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 298
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
+ L A + + L++G +H ++ G +V VA++L+ MYSK G+++ A +
Sbjct: 299 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF 358
Query: 349 DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
++ V W+ MI Y Q+G+ EA+ LF R + + P+ + T++L C
Sbjct: 359 INIEDRDVVSWSAMIASYEQAGQHDEAISLF-RDMMRIHIKPNAVTLTSVLQGC 411
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 152/307 (49%), Gaps = 3/307 (0%)
Query: 106 GLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSA 165
G+ IH Y V+ G ++ ++++L+ Y+KC + A ++F ++ D VSW+++IA +
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 166 NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNF 225
GQ +A LF++M+ HIKPN TLTSV+ C G A + ++H + +K +
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA-ASRLGKSIHCYAIKADIESELE 437
Query: 226 VICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKK 285
+++ YA C + +L KD + +N++ Y+Q + A ++ M+
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
P T+ +L C+ + G V+ +IK G + VA AL++M++K + A
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 346 FVLDQTSV-KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
+ D+ K+ V W M+ GY G+ EA+ F ++ E+ P+ + F I+ A
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK-FQPNAVTFVNIVRAAAE 616
Query: 405 AGFLEKG 411
L G
Sbjct: 617 LSALRVG 623
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 161/347 (46%), Gaps = 26/347 (7%)
Query: 23 PDLRHLHAFPVSDAKNFLCRQFFIKKFSGKTFENDCITKHSKNASTDRALDLLTGMNRLT 82
P L+ P+ DA F N +++ ++A D+ M
Sbjct: 454 PALKAFERLPIKDAVAF----------------NALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 83 AKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDAR 142
P + L +CA ++ G ++ +++ G++ ++ AL++ + KC A+ A
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 143 KVFRAMKVHDQ-VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQ 201
+F VSW ++ G+ +GQ +A F++M +PN T +++ A +
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRA-AAE 616
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSM 261
AL+ ++H+ +++ GF + V SLVD YA C I+ S E S K + +N+M
Sbjct: 617 LSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTM 676
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
+SAY+ + + A+ LF+ M++ + P + ++L+AC + EG+++ +MG
Sbjct: 677 LSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFE---EMGE 733
Query: 322 ----ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV-LWTTMI 363
E V + +VD+ K G EA ++ + VK +V +W ++
Sbjct: 734 RHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 155/316 (49%), Gaps = 13/316 (4%)
Query: 99 KARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD-ARKVFRAMKVHDQVSWT 157
+ +N+ LQ+H L+ SG + + + L++ Y+ F D +R +F +++ V W
Sbjct: 14 ECKNFRCLLQVHGSLIVSGLKPH----NQLINAYS-LFQRQDLSRVIFDSVRDPGVVLWN 68
Query: 158 SLIAGFSANGQGRDAFLLFKEMLGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVV 216
S+I G++ G R+A F M I P+ ++ T + AC G D + +H +
Sbjct: 69 SMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMD-FKKGLRIHDLIA 127
Query: 217 KRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQ 276
+ G + ++ +LV+ Y + + + + ++ KD + +N+M+S +QN CS AL
Sbjct: 128 EMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALL 187
Query: 277 LFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV-ASALVDMY 335
LF +MR +L ++ A S L R +H LVIK G +F +S L+DMY
Sbjct: 188 LFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMY 244
Query: 336 SKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYF 395
D+ A V ++ K+ W TM+ YA +G E LELFD L+ ++ + +
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD-LMRNYDVRMNKVAA 303
Query: 396 TAILTACNHAGFLEKG 411
+ L A + G L KG
Sbjct: 304 ASALQAAAYVGDLVKG 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 288 PTDHT-LCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARF 346
P ++T L +L C + L+ QVH +I G + + + L++ YS D +R
Sbjct: 2 PINYTNLLLMLRECKNFRCLL---QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRV 54
Query: 347 VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
+ D VLW +MI GY ++G EAL F + E+ + PD FT L AC +
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 407 FLEKG 411
+KG
Sbjct: 115 DFKKG 119
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 179/318 (56%), Gaps = 11/318 (3%)
Query: 97 CAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSW 156
C + N G+Q+H +V+ G E + F S++LV FY KC IV+AR+VF A+ D V W
Sbjct: 152 CTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLW 211
Query: 157 TSLIAGFSANGQGRDAFLLFKEMLGT---HIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
+L++ + NG +AF L K ++G+ + + FT +S++SAC ++ +HA
Sbjct: 212 NALVSSYVLNGMIDEAFGLLK-LMGSDKNRFRGDYFTFSSLLSAC-----RIEQGKQIHA 265
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
+ K ++ V +L++ YA + D+ ++ + +N+MI ++QN +
Sbjct: 266 ILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGRE 325
Query: 274 ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVD 333
A++LF +M + P + T ++L++C+ +++ E +QV ++V K GS + VA++L+
Sbjct: 326 AMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLIS 385
Query: 334 MYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHI 393
YS+ G++ EA + V WT++I A G E+L++F+ +L ++L PD I
Sbjct: 386 SYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML--QKLQPDKI 443
Query: 394 YFTAILTACNHAGFLEKG 411
F +L+AC+H G +++G
Sbjct: 444 TFLEVLSACSHGGLVQEG 461
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 159/302 (52%), Gaps = 13/302 (4%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGF---- 163
Q H ++V+ G ++LFL + L+ Y K DA K+F M + + V+W LI G
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 164 -SANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRT 222
N + F +L T + + + +I C + ++ LH +VK+G +
Sbjct: 117 GDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTN-MKAGIQLHCLMVKQGLES 175
Query: 223 SNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM- 281
S F SLV Y C I ++ + ++D +++N+++S+Y N +A L M
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMG 235
Query: 282 -RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGD 340
+ +F T ++L+AC + +G+Q+H+++ K+ + ++ VA+AL++MY+K
Sbjct: 236 SDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNH 291
Query: 341 IDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILT 400
+ +AR + V+N V W MI+G+AQ+G G EA+ LF ++L E L PD + F ++L+
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE-NLQPDELTFASVLS 350
Query: 401 AC 402
+C
Sbjct: 351 SC 352
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 156/299 (52%), Gaps = 13/299 (4%)
Query: 56 NDCITKHSKNASTDRALDLLT--GMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYL 113
N ++ + N D A LL G ++ + + LS+C + G QIHA L
Sbjct: 212 NALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQ----GKQIHAIL 267
Query: 114 VRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
+ Y+ ++ +++AL++ YAK + DAR+ F +M V + VSW ++I GF+ NG+GR+A
Sbjct: 268 FKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAM 327
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
LF +ML +++P+ T SV+S+C + A+ + A V K+G V SL+
Sbjct: 328 RLFGQMLLENLQPDELTFASVLSSC-AKFSAIWEIKQVQAMVTKKGSADFLSVANSLISS 386
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y+ + ++LL + E D + + S+I A + + + ++LQ+F M Q K P T
Sbjct: 387 YSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITF 445
Query: 294 CTILNACSSLASLIEGRQVHSLVI---KMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
+L+ACS + EG + + K+ +E + + L+D+ + G IDEA VL+
Sbjct: 446 LEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHY--TCLIDLLGRAGFIDEASDVLN 502
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 10/208 (4%)
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
D L H +VK+G S F+ L+ Y ++ DD+ L +E ++ + +N +I
Sbjct: 50 DHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILI 109
Query: 263 SAYSQNLCSGD----ALQLFVEMRQKKFSPT--DH-TLCTILNACSSLASLIEGRQVHSL 315
Q GD A F + + F+ DH + ++ C+ ++ G Q+H L
Sbjct: 110 HGVIQR--DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCL 167
Query: 316 VIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEA 375
++K G E + F +++LV Y K G I EAR V + ++ VLW ++ Y +G EA
Sbjct: 168 MVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEA 227
Query: 376 LELFDRLLTER-ELTPDHIYFTAILTAC 402
L + +++ D+ F+++L+AC
Sbjct: 228 FGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 163/303 (53%), Gaps = 3/303 (0%)
Query: 110 HAYLVRSGYE-DNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
H V G E N+F+ SALVD Y K +A+ V ++ D V T+LI G+S G+
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 169 GRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC 228
+A F+ ML ++PN +T SV+ +C KD + + +H +VK GF ++
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKD-IGNGKLIHGLMVKSGFESALASQT 306
Query: 229 SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSP 288
SL+ Y C +DDSL + + + + S+IS QN AL F +M + P
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKP 366
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
TL + L CS+LA EGRQ+H +V K G +R+ + S L+D+Y K G D AR V
Sbjct: 367 NSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVF 426
Query: 349 DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
D S + + TMI YAQ+G G EAL+LF+R++ L P+ + ++L ACN++ +
Sbjct: 427 DTLSEVDVISLNTMIYSYAQNGFGREALDLFERMIN-LGLQPNDVTVLSVLLACNNSRLV 485
Query: 409 EKG 411
E+G
Sbjct: 486 EEG 488
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 159/329 (48%), Gaps = 2/329 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I +S+ A+ M +P++ + L SC ++ G IH +V+SG+
Sbjct: 239 IVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF 298
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E L ++L+ Y +C + D+ +VF+ ++ +QVSWTSLI+G NG+ A + F++
Sbjct: 299 ESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRK 358
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M+ IKPN FTL+S + C + +H V K GF + L+D Y C
Sbjct: 359 MMRDSIKPNSFTLSSALRGC-SNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
D + L+ + SE D I N+MI +Y+QN +AL LF M P D T+ ++L
Sbjct: 418 CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
AC++ + EG ++ K + +VD+ + G ++EA + + + VL
Sbjct: 478 ACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVL 537
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERE 387
W T++ + R +E E R + E E
Sbjct: 538 WRTLLSA-CKVHRKVEMAERITRKILEIE 565
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 164/322 (50%), Gaps = 10/322 (3%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
L C R+ I A++++SG+ + S LVD KC I AR+VF M
Sbjct: 72 LRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHI 130
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVG---QKDALQHCST 210
V+W SLIA + + ++A +++ M+ ++ P+ +TL+SV A +K+A +
Sbjct: 131 VTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS--- 187
Query: 211 LHAHVVKRGFRTSN-FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
H V G SN FV +LVD Y + ++ L+L+ EKD ++ ++I YSQ
Sbjct: 188 -HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
+A++ F M +K P ++T ++L +C +L + G+ +H L++K G E + +
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQT 306
Query: 330 ALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELT 389
+L+ MY + +D++ V N V WT++I G Q+GR AL F +++ + +
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD-SIK 365
Query: 390 PDHIYFTAILTACNHAGFLEKG 411
P+ ++ L C++ E+G
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEG 387
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 189/354 (53%), Gaps = 5/354 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ +++ +++AL + M + +P+ L + LSSC G +H + VR
Sbjct: 275 ISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL 334
Query: 119 EDNL-FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
+ N LS ALV+ YA+C + D V R + + V+W SLI+ ++ G A LF+
Sbjct: 335 DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFR 394
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
+M+ IKP+ FTL S ISAC + +H HV++ + FV SL+D Y+
Sbjct: 395 QMVTQRIKPDAFTLASSISAC-ENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKS 452
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+D + + N+ + + +NSM+ +SQN S +A+ LF M + T ++
Sbjct: 453 GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVI 512
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
ACSS+ SL +G+ VH +I G +++F +AL+DMY+K GD++ A V S ++ V
Sbjct: 513 QACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W++MI Y GR A+ F++++ E P+ + F +L+AC H+G +E+G
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMV-ESGTKPNEVVFMNVLSACGHSGSVEEG 624
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 185/349 (53%), Gaps = 4/349 (1%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
+N +AL + M +P + + + CA+ + +H + R ++ +
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 124 LSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
L ++L+ Y+KC ++ + ++F + + VSWT++I+ ++ A F EM+ +
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 184 IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTS-NFVICSLVDCYANCKQIDD 242
I+PN TL SV+S+C G ++ ++H V+R + + +LV+ YA C ++ D
Sbjct: 299 IEPNLVTLYSVLSSC-GLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD 357
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
+L S+++ + +NS+IS Y+ AL LF +M ++ P TL + ++AC +
Sbjct: 358 CETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN 417
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTM 362
+ G+Q+H VI+ + FV ++L+DMYSK G +D A V +Q ++ V W +M
Sbjct: 418 AGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSM 476
Query: 363 IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ G++Q+G +EA+ LFD + L + + F A++ AC+ G LEKG
Sbjct: 477 LCGFSQNGNSVEAISLFD-YMYHSYLEMNEVTFLAVIQACSSIGSLEKG 524
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 187/346 (54%), Gaps = 6/346 (1%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHL--GLQIHAYLVRSGYEDNLFLSS 126
D A+DL + T + SK V + L +CA +R HL G ++H +++ G +D+ + +
Sbjct: 82 DAAIDLYHRLVSETTQISKFVFPSVLRACAGSRE-HLSVGGKVHGRIIKGGVDDDAVIET 140
Query: 127 ALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKP 186
+L+ Y + + DA KVF M V D V+W++L++ NG+ A +FK M+ ++P
Sbjct: 141 SLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEP 200
Query: 187 NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLL 246
+ T+ SV+ C + L+ ++H + ++ F + SL+ Y+ C + S +
Sbjct: 201 DAVTMISVVEGC-AELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASL 306
+ ++K+ + + +MIS+Y++ S AL+ F EM + P TL ++L++C + +
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319
Query: 307 IEGRQVHSLVIKMGSERNVFVAS-ALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMG 365
EG+ VH ++ + N S ALV++Y++ G + + VL S +N V W ++I
Sbjct: 320 REGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
YA G ++AL LF +++T+R + PD + ++AC +AG + G
Sbjct: 380 YAHRGMVIQALGLFRQMVTQR-IKPDAFTLASSISACENAGLVPLG 424
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 154/311 (49%), Gaps = 4/311 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ ++ +AL L M KP L +++S+C A LG QIH +++R
Sbjct: 374 NSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR 433
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ D F+ ++L+D Y+K ++ A VF +K V+W S++ GFS NG +A L
Sbjct: 434 TDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISL 492
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F M ++++ N T +VI AC +L+ +H ++ G + F +L+D YA
Sbjct: 493 FDYMYHSYLEMNEVTFLAVIQAC-SSIGSLEKGKWVHHKLIISGLKDL-FTDTALIDMYA 550
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C ++ + + S + + ++SMI+AY + G A+ F +M + P +
Sbjct: 551 KCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMN 610
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQTSVK 354
+L+AC S+ EG+ +L+ G N + +D+ S+ GD+ EA R + + +
Sbjct: 611 VLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLA 670
Query: 355 NNVLWTTMIMG 365
+ +W +++ G
Sbjct: 671 DASVWGSLVNG 681
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 148/318 (46%), Gaps = 7/318 (2%)
Query: 96 SCAKARNWHLGLQIHAYLVRSGY--EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
SC+ R L Q+HA+L+ +G D L ++ L++ YA + +R VF A D
Sbjct: 10 SCSSLR---LVSQLHAHLLVTGRLRRDPLPVTK-LIESYAFMGSPDSSRLVFEAFPYPDS 65
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
+ LI A L+ ++ + + F SV+ AC G ++ L +H
Sbjct: 66 FMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHG 125
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
++K G + SL+ Y + D+ + + +D + +++++S+ +N
Sbjct: 126 RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVK 185
Query: 274 ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVD 333
AL++F M P T+ +++ C+ L L R VH + + + + + ++L+
Sbjct: 186 ALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLT 245
Query: 334 MYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHI 393
MYSK GD+ + + ++ + KN V WT MI Y + +AL F ++ + + P+ +
Sbjct: 246 MYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI-KSGIEPNLV 304
Query: 394 YFTAILTACNHAGFLEKG 411
++L++C G + +G
Sbjct: 305 TLYSVLSSCGLIGLIREG 322
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 166/301 (55%), Gaps = 10/301 (3%)
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVD---ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDA 172
SG++ N + CF D R++F ++ +W ++++G+S +A
Sbjct: 344 SGFQPN---EVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 173 FLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD 232
F++M ++KP+ TL+ ++S+C + L+ +H V++ ++ ++ L+
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCARLR-FLEGGKQIHGVVIRTEISKNSHIVSGLIA 459
Query: 233 CYANCKQIDDSLLLLNE-TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKK-FSPTD 290
Y+ C++++ S + ++ +E D +NSMIS + N+ AL LF M Q P +
Sbjct: 460 VYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNE 519
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
+ T+L++CS L SL+ GRQ H LV+K G + FV +AL DMY K G+ID AR D
Sbjct: 520 TSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDA 579
Query: 351 TSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
KN V+W MI GY +GRG EA+ L+ ++++ E PD I F ++LTAC+H+G +E
Sbjct: 580 VLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTACSHSGLVET 638
Query: 411 G 411
G
Sbjct: 639 G 639
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 5/312 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N ++ +S + A+ M KP K+ L LSSCA+ R G QIH ++R
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFR-AMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+ N + S L+ Y++C + + +F + D W S+I+GF N A +
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504
Query: 175 LFKEMLGTHIK-PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
LF+ M T + PN + +V+S+C + +L H H VVK G+ + +FV +L D
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLSSC-SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 563
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y C +ID + + K+T+++N MI Y N +A+ L+ +M P T
Sbjct: 564 YCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITF 623
Query: 294 CTILNACSSLASLIEGRQVHSLVIKM-GSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
++L ACS + G ++ S + ++ G E + +VD + G +++A + + T
Sbjct: 624 VSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATP 683
Query: 353 VK-NNVLWTTMI 363
K ++VLW ++
Sbjct: 684 YKSSSVLWEILL 695
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 159/349 (45%), Gaps = 47/349 (13%)
Query: 106 GLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ------------ 153
G IH ++VR G + + +L + L+D Y +C ARKVF M V D
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 154 -------------------VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSV 194
VSW ++I+ G A +++K M+ P+ FTL SV
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 195 ISACVGQKDAL--QHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI-DDSLLLLNETS 251
+SAC D + C H VK G + FV +L+ YA C I D + + S
Sbjct: 145 LSACSKVLDGVFGMRC---HGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS 201
Query: 252 EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN------ACSSLAS 305
+ + + Y ++I ++ +A+Q+F M +K L IL+ C SL+
Sbjct: 202 QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSE 261
Query: 306 LIE---GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTM 362
+ G+Q+H L +++G ++ + ++L+++Y+K D++ A + + N V W M
Sbjct: 262 IYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 363 IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
I+G+ Q R +++E R + + P+ + ++L AC +G +E G
Sbjct: 322 IVGFGQEYRSDKSVEFLTR-MRDSGFQPNEVTCISVLGACFRSGDVETG 369
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 151/336 (44%), Gaps = 45/336 (13%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD-ARK 143
PS+ L + LS+C+K + G++ H V++G + N+F+ +AL+ YAKC IVD +
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK- 202
VF ++ ++VS+T++I G + + +A +F+ M ++ + L++++S ++
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 203 -DALQHC------STLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDT 255
D+L +H ++ GF + SL++ YA K ++ + L+ E E +
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 256 IVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSL 315
+ +N MI + Q S +++ MR F P + T ++L AC
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC--------------- 360
Query: 316 VIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEA 375
+ GD++ R + + W M+ GY+ EA
Sbjct: 361 --------------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 376 LELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ F R + + L PD + IL++C FLE G
Sbjct: 401 ISNF-RQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 307 IEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGY 366
+ G+ +H +++MG + + ++ + L+D+Y + GD D AR V D+ SV++ W +
Sbjct: 23 LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 367 AQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
+ G EA E+FD + ER D + + +++ GF EK
Sbjct: 83 CKVGDLGEACEVFDG-MPER----DVVSWNNMISVLVRKGFEEK 121
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 188/386 (48%), Gaps = 33/386 (8%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++ + + A+ L M P K LS+CAK+R G+QIH +V+
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
GY +LF+ ++LV FYA+C + ARKVF M + VSWTS+I G++ +DA L
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 176 FKEML-GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
F M+ + PN T+ VISAC +D L+ ++A + G ++ ++ +LVD Y
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLED-LETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
C ID + L +E + + N+M S Y + + +AL +F M P ++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+ +++CS L +++ G+ H V++ G E + +AL+DMY K D A + D+ S K
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 355 NNVLWTTMIMGYAQSGR------------------------GL-------EALELFDRLL 383
V W +++ GY ++G GL EA+E+F +
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 384 TERELTPDHIYFTAILTACNHAGFLE 409
++ + D + +I +AC H G L+
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALD 487
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 188/374 (50%), Gaps = 35/374 (9%)
Query: 71 ALDLLTGMNR-LTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
A+DL M R P+ + +S+CAK + G +++A++ SG E N + SALV
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
D Y KC AI A+++F + ++ + + G R+A +F M+ + ++P+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 190 TLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
++ S IS+C ++ L + H +V++ GF + + + +L+D Y C + D + + +
Sbjct: 339 SMLSAISSCSQLRNILWG-KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 250 TSEKDTIVYNSMISAYSQN-----------------------LCSG--------DALQLF 278
S K + +NS+++ Y +N + SG +A+++F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 279 VEMRQKKFSPTDH-TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK 337
M+ ++ D T+ +I +AC L +L + ++ + K G + +V + + LVDM+S+
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 338 GGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTA 397
GD + A + + + ++ WT I A +G A+ELFD ++ E+ L PD + F
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI-EQGLKPDGVAFVG 576
Query: 398 ILTACNHAGFLEKG 411
LTAC+H G +++G
Sbjct: 577 ALTACSHGGLVQQG 590
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 136/250 (54%), Gaps = 3/250 (1%)
Query: 156 WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHV 215
+ SLI G++++G +A LLF M+ + I P+ +T +SAC + A + +H +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR-AKGNGIQIHGLI 160
Query: 216 VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDAL 275
VK G+ FV SLV YA C ++D + + +E SE++ + + SMI Y++ + DA+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 276 QLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDM 334
LF M R ++ +P T+ +++AC+ L L G +V++ + G E N + SALVDM
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 335 YSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIY 394
Y K ID A+ + D+ N L M Y + G EAL +F+ L+ + + PD I
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN-LMMDSGVRPDRIS 339
Query: 395 FTAILTACNH 404
+ +++C+
Sbjct: 340 MLSAISSCSQ 349
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 26/256 (10%)
Query: 179 MLGT--HIKPNCFTLTSVI-------SACV-GQKDALQHCSTL------HAHVVKRGFRT 222
MLG H+ P T+ S C +L++C T+ H + K+G
Sbjct: 3 MLGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDN 62
Query: 223 SNFVICSLV--DCYANCKQIDDSLLLLNETSEKDT-----IVYNSMISAYSQNLCSGDAL 275
I LV C ++ SL E E +YNS+I Y+ + +A+
Sbjct: 63 DVSTITKLVARSCELGTRE---SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAI 119
Query: 276 QLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMY 335
LF+ M SP +T L+AC+ + G Q+H L++KMG +++FV ++LV Y
Sbjct: 120 LLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY 179
Query: 336 SKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYF 395
++ G++D AR V D+ S +N V WT+MI GYA+ +A++LF R++ + E+TP+ +
Sbjct: 180 AECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 396 TAILTACNHAGFLEKG 411
+++AC LE G
Sbjct: 240 VCVISACAKLEDLETG 255
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 152/342 (44%), Gaps = 35/342 (10%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + + + T AL + M +P + + +A+SSC++ RN G H Y++R
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G+E + +AL+D Y KC A ++F M V+W S++AG+ NG+ A+
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 176 FKEMLGTHI--------------------------------KPNCFTLTSVISACVGQKD 203
F+ M +I + T+ S+ SAC G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC-GHLG 484
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
AL ++ ++ K G + + +LVD ++ C + ++ + N + +D + + I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM-GSE 322
A + + A++LF +M ++ P L ACS + +G+++ ++K+ G
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 323 RNVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNNVLWTTMI 363
+VD+ + G ++EA + + D N+V+W +++
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLL 646
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 95 SSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQV 154
S+C L I+ Y+ ++G + ++ L + LVD +++C A +F ++ D
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 155 SWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAH 214
+WT+ I + G A LF +M+ +KP+ ++AC Q ++
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 215 VVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS-EKDTIVYNSMISA 264
+ G + +VD +++++ L+ + E + +++NS+++A
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 177/332 (53%), Gaps = 2/332 (0%)
Query: 80 RLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIV 139
R + K S + +C + ++ +++ +++ +G+E ++ + ++ + KC I+
Sbjct: 116 RCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMII 175
Query: 140 DARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACV 199
DAR++F + + S+ S+I+GF G +AF LFK M T ++ A
Sbjct: 176 DARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASA 235
Query: 200 GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYN 259
G ++ LH +K G + FV C L+D Y+ C I+D+ EK T+ +N
Sbjct: 236 GL-GSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWN 294
Query: 260 SMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM 319
++I+ Y+ + S +AL L +MR S TL ++ + LA L +Q H+ +I+
Sbjct: 295 NVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN 354
Query: 320 GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELF 379
G E + +ALVD YSK G +D AR+V D+ KN + W ++ GYA GRG +A++LF
Sbjct: 355 GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLF 414
Query: 380 DRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++++ + P+H+ F A+L+AC ++G E+G
Sbjct: 415 EKMIAAN-VAPNHVTFLAVLSACAYSGLSEQG 445
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 39/301 (12%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N+ I ++ + ++ AL LL M + L + K L Q HA L+R
Sbjct: 294 NNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIR 353
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G+E + ++ALVDFY+K + AR VF + + +SW +L+ G++ +G+G DA L
Sbjct: 354 NGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKL 413
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F++M+ ++ PN T +V+SAC ++ + ++G+ + S+ + +
Sbjct: 414 FEKMIAANVAPNHVTFLAVLSACA------------YSGLSEQGWE----IFLSMSEVHG 457
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
+ + Y MI ++ +A+ +R+ T +
Sbjct: 458 ---------------IKPRAMHYACMIELLGRDGLLDEAIAF---IRRAPLKTTVNMWAA 499
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSER--NVFVASALVDMYSKGGDIDEARFVLDQTSV 353
+LNAC +L GR V + MG E+ N V + +MY+ G EA VL+
Sbjct: 500 LLNACRMQENLELGRVVAEKLYGMGPEKLGNYVV---MYNMYNSMGKTAEAAGVLETLES 556
Query: 354 K 354
K
Sbjct: 557 K 557
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 188/386 (48%), Gaps = 33/386 (8%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++ + + A+ L M P K LS+CAK+R G+QIH +V+
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
GY +LF+ ++LV FYA+C + ARKVF M + VSWTS+I G++ +DA L
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 176 FKEML-GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
F M+ + PN T+ VISAC +D L+ ++A + G ++ ++ +LVD Y
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLED-LETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
C ID + L +E + + N+M S Y + + +AL +F M P ++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+ +++CS L +++ G+ H V++ G E + +AL+DMY K D A + D+ S K
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 355 NNVLWTTMIMGYAQSGR------------------------GL-------EALELFDRLL 383
V W +++ GY ++G GL EA+E+F +
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 384 TERELTPDHIYFTAILTACNHAGFLE 409
++ + D + +I +AC H G L+
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALD 487
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 188/374 (50%), Gaps = 35/374 (9%)
Query: 71 ALDLLTGMNR-LTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
A+DL M R P+ + +S+CAK + G +++A++ SG E N + SALV
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
D Y KC AI A+++F + ++ + + G R+A +F M+ + ++P+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 190 TLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
++ S IS+C ++ L + H +V++ GF + + + +L+D Y C + D + + +
Sbjct: 339 SMLSAISSCSQLRNILWG-KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 250 TSEKDTIVYNSMISAYSQN-----------------------LCSG--------DALQLF 278
S K + +NS+++ Y +N + SG +A+++F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 279 VEMRQKKFSPTDH-TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK 337
M+ ++ D T+ +I +AC L +L + ++ + K G + +V + + LVDM+S+
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 338 GGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTA 397
GD + A + + + ++ WT I A +G A+ELFD ++ E+ L PD + F
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI-EQGLKPDGVAFVG 576
Query: 398 ILTACNHAGFLEKG 411
LTAC+H G +++G
Sbjct: 577 ALTACSHGGLVQQG 590
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 136/250 (54%), Gaps = 3/250 (1%)
Query: 156 WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHV 215
+ SLI G++++G +A LLF M+ + I P+ +T +SAC + A + +H +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR-AKGNGIQIHGLI 160
Query: 216 VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDAL 275
VK G+ FV SLV YA C ++D + + +E SE++ + + SMI Y++ + DA+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 276 QLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDM 334
LF M R ++ +P T+ +++AC+ L L G +V++ + G E N + SALVDM
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 335 YSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIY 394
Y K ID A+ + D+ N L M Y + G EAL +F+ L+ + + PD I
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN-LMMDSGVRPDRIS 339
Query: 395 FTAILTACNH 404
+ +++C+
Sbjct: 340 MLSAISSCSQ 349
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 26/256 (10%)
Query: 179 MLGT--HIKPNCFTLTSVI-------SACV-GQKDALQHCSTL------HAHVVKRGFRT 222
MLG H+ P T+ S C +L++C T+ H + K+G
Sbjct: 3 MLGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDN 62
Query: 223 SNFVICSLV--DCYANCKQIDDSLLLLNETSEKDT-----IVYNSMISAYSQNLCSGDAL 275
I LV C ++ SL E E +YNS+I Y+ + +A+
Sbjct: 63 DVSTITKLVARSCELGTRE---SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAI 119
Query: 276 QLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMY 335
LF+ M SP +T L+AC+ + G Q+H L++KMG +++FV ++LV Y
Sbjct: 120 LLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY 179
Query: 336 SKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYF 395
++ G++D AR V D+ S +N V WT+MI GYA+ +A++LF R++ + E+TP+ +
Sbjct: 180 AECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 396 TAILTACNHAGFLEKG 411
+++AC LE G
Sbjct: 240 VCVISACAKLEDLETG 255
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 152/342 (44%), Gaps = 35/342 (10%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + + + T AL + M +P + + +A+SSC++ RN G H Y++R
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G+E + +AL+D Y KC A ++F M V+W S++AG+ NG+ A+
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 176 FKEMLGTHI--------------------------------KPNCFTLTSVISACVGQKD 203
F+ M +I + T+ S+ SAC G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC-GHLG 484
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
AL ++ ++ K G + + +LVD ++ C + ++ + N + +D + + I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM-GSE 322
A + + A++LF +M ++ P L ACS + +G+++ ++K+ G
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 323 RNVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNNVLWTTMI 363
+VD+ + G ++EA + + D N+V+W +++
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLL 646
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 95 SSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQV 154
S+C L I+ Y+ ++G + ++ L + LVD +++C A +F ++ D
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 155 SWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAH 214
+WT+ I + G A LF +M+ +KP+ ++AC Q ++
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 215 VVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS-EKDTIVYNSMISA 264
+ G + +VD +++++ L+ + E + +++NS+++A
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 182/326 (55%), Gaps = 15/326 (4%)
Query: 93 ALSSCAKARNWHLGLQIHAYLVRSGYE-DNLFLSSALVDFYAKCFA----IVDARKVFRA 147
+SS K R QIHA+ +R G + L L+ FY + A KVF
Sbjct: 26 GVSSITKLR------QIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSK 78
Query: 148 MKVHDQV-SWTSLIAGFSANGQGRDAFLLFKEM-LGTHIKPNCFTLTSVISACVGQKDAL 205
++ V W +LI G++ G AF L++EM + ++P+ T +I A D +
Sbjct: 79 IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD-V 137
Query: 206 QHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAY 265
+ T+H+ V++ GF + +V SL+ YANC + + + ++ EKD + +NS+I+ +
Sbjct: 138 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 197
Query: 266 SQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNV 325
++N +AL L+ EM K P T+ ++L+AC+ + +L G++VH +IK+G RN+
Sbjct: 198 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 257
Query: 326 FVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTE 385
++ L+D+Y++ G ++EA+ + D+ KN+V WT++I+G A +G G EA+ELF + +
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 317
Query: 386 RELTPDHIYFTAILTACNHAGFLEKG 411
L P I F IL AC+H G +++G
Sbjct: 318 EGLLPCEITFVGILYACSHCGMVKEG 343
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 145/277 (52%), Gaps = 7/277 (2%)
Query: 90 LCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK 149
L A+++ A R LG IH+ ++RSG+ +++ ++L+ YA C + A KVF M
Sbjct: 127 LIKAVTTMADVR---LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183
Query: 150 VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
D V+W S+I GF+ NG+ +A L+ EM IKP+ FT+ S++SAC + AL
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSAC-AKIGALTLGK 242
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
+H +++K G + L+D YA C +++++ L +E +K+++ + S+I + N
Sbjct: 243 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 270 CSGDALQLFVEMRQKK-FSPTDHTLCTILNACSSLASLIEGRQV-HSLVIKMGSERNVFV 327
+A++LF M + P + T IL ACS + EG + + + E +
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 328 ASALVDMYSKGGDIDEA-RFVLDQTSVKNNVLWTTMI 363
+VD+ ++ G + +A ++ N V+W T++
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++N + AL L T MN KP + + LS+CAK LG ++H Y+++
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G NL S+ L+D YA+C + +A+ +F M + VSWTSLI G + NG G++A L
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 176 FKEMLGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFR 221
FK M T + P T ++ AC HC +VK GF
Sbjct: 311 FKYMESTEGLLPCEITFVGILYAC-------SHCG-----MVKEGFE 345
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 183/362 (50%), Gaps = 5/362 (1%)
Query: 53 TFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAY 112
T N ++ ++ TD+A L M P + T + S + ++ L +HA
Sbjct: 119 TTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAV 178
Query: 113 LVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ--VSWTSLIAGFSANGQGR 170
+R G + + +++ + Y KC + A+ VF A+ D+ VSW S+ +S G+
Sbjct: 179 GIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAF 238
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSL 230
DAF L+ ML KP+ T ++ ++C + L +H+H + G I +
Sbjct: 239 DAFGLYCLMLREEFKPDLSTFINLAASC-QNPETLTQGRLIHSHAIHLGTDQDIEAINTF 297
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
+ Y+ + + LL + + + + + MIS Y++ +AL LF M + P
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDL 357
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSER-NVFVASALVDMYSKGGDIDEARFVLD 349
TL ++++ C SL G+ + + G +R NV + +AL+DMYSK G I EAR + D
Sbjct: 358 VTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLE 409
T K V WTTMI GYA +G LEAL+LF +++ + + P+HI F A+L AC H+G LE
Sbjct: 418 NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI-DLDYKPNHITFLAVLQACAHSGSLE 476
Query: 410 KG 411
KG
Sbjct: 477 KG 478
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 172/344 (50%), Gaps = 4/344 (1%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
+L L M R +P+ +CA+ + +HA+L++S + ++F+ +A V
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
D + KC ++ A KVF M D +W ++++GF +G AF LF+EM I P+
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 190 TLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
T+ ++I + +K +L+ +HA ++ G V + + Y C +D + L+
Sbjct: 155 TVMTLIQSASFEK-SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 250 TSEKDTIV--YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI 307
D V +NSM AYS + DA L+ M +++F P T + +C + +L
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 308 EGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYA 367
+GR +HS I +G+++++ + + MYSK D AR + D + + V WT MI GYA
Sbjct: 274 QGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYA 333
Query: 368 QSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ G EAL LF ++ E PD + ++++ C G LE G
Sbjct: 334 EKGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFGSLETG 376
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 142 RKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQ 201
R+++R + +W I ++ LLF+EM +PN FT V AC
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSM 261
D + C +HAH++K F + FV + VD + C +D + + E+D +N+M
Sbjct: 66 AD-VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAM 124
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
+S + Q+ + A LF EMR + +P T+ T++ + S SL +H++ I++G
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV 184
Query: 322 ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN--VLWTTMIMGYAQSGRGLEALELF 379
+ V VA+ + Y K GD+D A+ V + + V W +M Y+ G +A L+
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244
Query: 380 DRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+L E E PD F + +C + L +G
Sbjct: 245 CLMLRE-EFKPDLSTFINLAASCQNPETLTQG 275
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 196/420 (46%), Gaps = 65/420 (15%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N +T +S+ A+ L T + AKP LS+CA N G +I + ++R
Sbjct: 39 NTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIR 98
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM--KVHDQVSWTSL-------------- 159
SG+ +L ++++L+D Y KC + A KVFR M ++V+W SL
Sbjct: 99 SGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAAL 158
Query: 160 -----------------IAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK 202
I+G + G+ LFKEML + KP+C+T +S+++AC
Sbjct: 159 DVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADS 218
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL------------------ 244
+ + +HA ++K G+ ++ S++ Y DD++
Sbjct: 219 SNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSII 278
Query: 245 ---LLLNETS----------EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
+ + ET EK+ + + +MI+ Y +N AL+ FVEM +
Sbjct: 279 DACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHF 338
Query: 292 TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT 351
+L+ACS LA L G+ +H +I G + +V +ALV++Y+K GDI EA
Sbjct: 339 AYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI 398
Query: 352 SVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ K+ V W TM+ + G +AL+L+D ++ + PD++ F +LT C+H+G +E+G
Sbjct: 399 ANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASG-IKPDNVTFIGLLTTCSHSGLVEEG 457
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 65/343 (18%)
Query: 133 AKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLT 192
AK I AR+VF M D V+W +++ +S G ++A LF ++ + KP+ ++ T
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 193 SVISACV-------GQK---------------------DALQHCS-TLHAHVVKRGF--- 220
+++S C G+K D CS TL A+ V R
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 221 RTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE 280
+ CSL+ Y N +Q + +L + E ++ +N MIS ++ L LF E
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 281 MRQKKFSPTDHTLCTILNACSSLAS-LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGG 339
M + +F P +T +++NACS+ +S ++ GR VH++++K G V ++++ Y+K G
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 340 DIDEARFVLDQTSV-------------------------------KNNVLWTTMIMGYAQ 368
D+A L+ V KN V WTTMI GY +
Sbjct: 255 SRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+G G +AL F ++ + + DH + A+L AC+ L G
Sbjct: 315 NGDGEQALRFFVEMM-KSGVDSDHFAYGAVLHACSGLALLGHG 356
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 150/346 (43%), Gaps = 39/346 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSC-AKARNWHLGLQIHAYLV 114
N I+ H+ + L L M KP + +++C A + N G +HA ++
Sbjct: 173 NIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVML 232
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSW------------------ 156
++G+ + ++++ FY K + DA + +++V QVSW
Sbjct: 233 KNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALE 292
Query: 157 -------------TSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD 203
T++I G+ NG G A F EM+ + + + F +V+ AC G
Sbjct: 293 VFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLA- 351
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
L H +H ++ GF+ +V +LV+ YA C I ++ + + KD + +N+M+
Sbjct: 352 LLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLF 411
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV-HSLVIKMGSE 322
A+ + + AL+L+ M P + T +L CS + EG + S+V
Sbjct: 412 AFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIP 471
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQ-----TSVKNNVLWTTMI 363
V + ++DM+ +GG + EA+ + T NN W T++
Sbjct: 472 LEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLL 517
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 181/357 (50%), Gaps = 5/357 (1%)
Query: 57 DCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRS 116
+C+ + + RAL+ L M R L L +C+ +G Q+H +V+S
Sbjct: 208 NCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKS 267
Query: 117 GYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK--VHDQVS-WTSLIAGFSANGQGRDAF 173
G E + F SAL+D Y+ C +++ A VF K V+ V+ W S+++GF N + A
Sbjct: 268 GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAAL 327
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
L ++ + + + +TL+ + C+ + L+ +H+ VV G+ V LVD
Sbjct: 328 WLLLQIYQSDLCFDSYTLSGALKICINYVN-LRLGLQVHSLVVVSGYELDYIVGSILVDL 386
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
+AN I D+ L + KD I ++ +I ++ + A LF E+ + +
Sbjct: 387 HANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIV 446
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
IL CSSLASL G+Q+H L IK G E A+ALVDMY K G+ID + D
Sbjct: 447 SNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLE 506
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
++ V WT +I+G+ Q+GR EA F +++ + P+ + F +L+AC H+G LE+
Sbjct: 507 RDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN-IGIEPNKVTFLGLLSACRHSGLLEE 562
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 138/276 (50%), Gaps = 3/276 (1%)
Query: 90 LCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK 149
L AL C N LGLQ+H+ +V SGYE + + S LVD +A I DA K+F +
Sbjct: 345 LSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP 404
Query: 150 VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
D ++++ LI G +G AF LF+E++ + + F +++++ C +L
Sbjct: 405 NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVC-SSLASLGWGK 463
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
+H +K+G+ + +LVD Y C +ID+ ++L + E+D + + +I + QN
Sbjct: 464 QIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNG 523
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQ-VHSLVIKMGSERNVFVA 328
+A + F +M P T +L+AC L E R + ++ + G E +
Sbjct: 524 RVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHY 583
Query: 329 SALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMI 363
+VD+ + G EA ++++ ++ + +WT+++
Sbjct: 584 YCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLL 619
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 158/349 (45%), Gaps = 38/349 (10%)
Query: 89 VLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM 148
++ L C K + + G I A++++ G N+F+++ ++ Y + DA KVF M
Sbjct: 7 LIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM 66
Query: 149 KVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK-PNCFTLTSVISACVGQKDALQH 207
+ V+WT++++G++++G+ A L++ ML + + N F ++V+ AC G +Q
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKAC-GLVGDIQL 125
Query: 208 CSTLHAHVVKRGFRTSNFVICSLVDCYAN-----------------------------CK 238
++ + K R ++ S+VD Y CK
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 239 Q--IDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTI 296
+D+++ L + + + + +N +IS + S AL+ V M+++ L
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK-GSPRALEFLVRMQREGLVLDGFALPCG 244
Query: 297 LNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN 356
L ACS L G+Q+H V+K G E + F SAL+DMYS G + A V Q + N
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 357 ---VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
+W +M+ G+ + AL L ++ + +L D + L C
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIY-QSDLCFDSYTLSGALKIC 352
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 166/388 (42%), Gaps = 38/388 (9%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTA-LSSCAKARNWHLGLQIHAYLVRSG 117
++ ++ + ++A++L M + + + +A L +C + LG+ ++ + +
Sbjct: 78 VSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKEN 137
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRA------------------------------ 147
++ L +++VD Y K +++A F+
Sbjct: 138 LRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFH 197
Query: 148 -MKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQ 206
M + VSW LI+GF G R A M + + F L + AC L
Sbjct: 198 RMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKAC-SFGGLLT 255
Query: 207 HCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS---EKDTIVYNSMIS 263
LH VVK G +S F I +L+D Y+NC + + + ++ V+NSM+S
Sbjct: 256 MGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
+ N + AL L +++ Q +TL L C + +L G QVHSLV+ G E
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
+ V S LVD+++ G+I +A + + K+ + ++ +I G +SG A LF R L
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLF-REL 434
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
+ L D + IL C+ L G
Sbjct: 435 IKLGLDADQFIVSNILKVCSSLASLGWG 462
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 200 GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYN 259
G+ A + ++ AHV+K+G + F+ +++ Y + + + D+ + +E SE++ + +
Sbjct: 16 GKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWT 75
Query: 260 SMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK 318
+M+S Y+ + A++L+ M ++ + + +L AC + + G V+ + K
Sbjct: 76 TMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGK 135
Query: 319 MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
+V + +++VDMY K G + EA + ++ W T+I GY ++G EA+ L
Sbjct: 136 ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTL 195
Query: 379 FDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
F R+ P+ + + +++ GF++KG
Sbjct: 196 FHRM-----PQPNVVSWNCLIS-----GFVDKG 218
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%)
Query: 297 LNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN 356
L C + + G + + VIK G +NVF+A+ ++ MY + +A V D+ S +N
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V WTTM+ GY G+ +A+EL+ R+L E + ++A+L AC G ++ G
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 184/357 (51%), Gaps = 9/357 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALS--SCAKARNWHLGLQIHAYL 113
N IT S++ +A+ L T M + + + +C+ LS C +LG Q+H Y
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCL-----NLGKQVHGYT 476
Query: 114 VRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
++SG +L + S+L Y+KC ++ ++ K+F+ + D W S+I+GF+ G R+A
Sbjct: 477 LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAI 536
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
LF EML P+ TL +V++ C +L +H + ++ G + +LV+
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHP-SLPRGKEIHGYTLRAGIDKGMDLGSALVNM 595
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y+ C + + + + E D + +S+IS YSQ+ D LF +M F+ +
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
+IL A + G QVH+ + K+G V S+L+ MYSK G ID+ Q +
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING 715
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
+ + WT +I YAQ G+ EAL++++ L+ E+ PD + F +L+AC+H G +E+
Sbjct: 716 PDLIAWTALIASYAQHGKANEALQVYN-LMKEKGFKPDKVTFVGVLSACSHGGLVEE 771
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 184/358 (51%), Gaps = 9/358 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I +N + DL M KP + L++CA G + A +++
Sbjct: 220 NTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIK 279
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G ED +F+ +A+VD YAKC + +A +VF + VSWT +++G++ + A +
Sbjct: 280 CGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEI 338
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
FKEM + ++ N T+TSVISAC G+ + S +HA V K GF + V +L+ Y+
Sbjct: 339 FKEMRHSGVEINNCTVTSVISAC-GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYS 397
Query: 236 NCKQIDDSLLLLNETS--EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
ID S + + ++ IV N MI+++SQ+ G A++LF M Q+ + ++
Sbjct: 398 KSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSV 456
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
C++L S L L G+QVH +K G ++ V S+L +YSK G ++E+ +
Sbjct: 457 CSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
K+N W +MI G+ + G EA+ LF +L + +PD A+LT C+ L +G
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGT-SPDESTLAAVLTVCSSHPSLPRG 570
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 167/331 (50%), Gaps = 3/331 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + ++ + +L + M+ L + ++ + +S+C+ + + + ++
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
GY + SAL+D ++K DA KVFR + W ++IAG N F L
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F EM KP+ +T +SV++AC + L+ + A V+K G FV ++VD YA
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAAC-ASLEKLRFGKVVQARVIKCGAEDV-FVCTAIVDLYA 296
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C + +++ + + + + M+S Y+++ + AL++F EMR + T+ +
Sbjct: 297 KCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTS 356
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL-DQTSVK 354
+++AC + + E QVH+ V K G + VA+AL+ MYSK GDID + V D ++
Sbjct: 357 VISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ 416
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTE 385
+ MI ++QS + +A+ LF R+L E
Sbjct: 417 RQNIVNVMITSFSQSKKPGKAIRLFTRMLQE 447
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 168/344 (48%), Gaps = 6/344 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
++ ++K+ AL++ M + + + + +S+C + Q+HA++ +SG+
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMK-VHDQVSWTSLIAGFSANGQGRDAFLLFK 177
+ +++AL+ Y+K I + +VF + + Q +I FS + + A LF
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFT 442
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
ML ++ + F++ S++S D L +H + +K G V SL Y+ C
Sbjct: 443 RMLQEGLRTDEFSVCSLLSVL----DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKC 498
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+++S L KD + SMIS +++ +A+ LF EM SP + TL +L
Sbjct: 499 GSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVL 558
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
CSS SL G+++H ++ G ++ + + SALV+MYSK G + AR V D+ + V
Sbjct: 559 TVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPV 618
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
+++I GY+Q G + LF R + T D ++IL A
Sbjct: 619 SCSSLISGYSQHGLIQDGFLLF-RDMVMSGFTMDSFAISSILKA 661
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 146/283 (51%), Gaps = 3/283 (1%)
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML 180
++FL+ +L+ +Y+ ++ DA K+F + D VS +I+G+ + ++ F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 181 GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
+ N + SVISAC + L + H +K G+ V +L+D ++ +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPL-FSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 241 DDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
+D+ + ++ + +N++I+ +N G LF EM P +T ++L AC
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWT 360
+SL L G+ V + VIK G+E +VFV +A+VD+Y+K G + EA V + + V WT
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWT 320
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
M+ GY +S ALE+F + + + ++ T++++AC
Sbjct: 321 VMLSGYTKSNDAFSALEIF-KEMRHSGVEINNCTVTSVISACG 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 2/199 (1%)
Query: 205 LQHCSTLHAHVVKRGFRTSN-FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
L+ L AH+++R + F+ SL+ Y+N + D+ L + + D + N MIS
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
Y Q+ ++L+ F +M F + + ++++ACS+L + + V IKMG
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
V SAL+D++SK ++A V + N W T+I G ++ +LF +
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 384 TERELTPDHIYFTAILTAC 402
+ PD ++++L AC
Sbjct: 244 VGFQ-KPDSYTYSSVLAAC 261
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 171/341 (50%), Gaps = 1/341 (0%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
AL LL M + +AL++C + G +H +V SG N + +ALV
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 388
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
Y K + ++R+V M D V+W +LI G++ + A F+ M + N T
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 448
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNET 250
+ SV+SAC+ D L+ LHA++V GF + V SL+ YA C + S L N
Sbjct: 449 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 508
Query: 251 SEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGR 310
++ I +N+M++A + + + L+L +MR S + L+A + LA L EG+
Sbjct: 509 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 568
Query: 311 QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSG 370
Q+H L +K+G E + F+ +A DMYSK G+I E +L + ++ W +I + G
Sbjct: 569 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 628
Query: 371 RGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
E F +L E + P H+ F ++LTAC+H G ++KG
Sbjct: 629 YFEEVCATFHEML-EMGIKPGHVTFVSLLTACSHGGLVDKG 668
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 181/343 (52%), Gaps = 3/343 (0%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARN-WHLGLQIHAYLVRSGYEDNLFLSSAL 128
++ M L KPS V+ + +++C ++ + + G+Q+H ++ +SG ++++S+A+
Sbjct: 24 EGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAI 83
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
+ Y + +RKVF M + VSWTSL+ G+S G+ + ++K M G + N
Sbjct: 84 LHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNE 143
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
+++ VIS+C KD + VVK G + V SL+ + +D + + +
Sbjct: 144 NSMSLVISSCGLLKDE-SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 202
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
+ SE+DTI +NS+ +AY+QN ++ ++F MR+ T+ T+L+ +
Sbjct: 203 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 262
Query: 309 GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQ 368
GR +H LV+KMG + V V + L+ MY+ G EA V Q K+ + W +++ +
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
GR L+AL L +++ + + +++ FT+ L AC F EKG
Sbjct: 323 DGRSLDALGLLCSMISSGK-SVNYVTFTSALAACFTPDFFEKG 364
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 175/354 (49%), Gaps = 3/354 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
+ +S + +D+ GM +++ + +SSC ++ LG QI +V+SG
Sbjct: 115 MVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL 174
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E L + ++L+ + A +F M D +SW S+ A ++ NG ++F +F
Sbjct: 175 ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL 234
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M H + N T+++++S +G D + +H VVK GF + V +L+ YA
Sbjct: 235 MRRFHDEVNSTTVSTLLSV-LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+ ++ L+ + KD I +NS+++++ + S DAL L M S T + L
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 353
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
AC + +GR +H LV+ G N + +ALV MY K G++ E+R VL Q ++ V
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA 413
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG-FLEKG 411
W +I GYA+ +AL F + E ++ ++I ++L+AC G LE+G
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERG 466
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 172/357 (48%), Gaps = 3/357 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N +++N + + + + M R + + + + T LS + G IH +V+
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 272
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G++ + + + L+ YA V+A VF+ M D +SW SL+A F +G+ DA L
Sbjct: 273 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 332
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
M+ + N T TS ++AC D + LH VV G + + +LV Y
Sbjct: 333 LCSMISSGKSVNYVTFTSALAACF-TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 391
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
++ +S +L + +D + +N++I Y+++ AL F MR + S T+ +
Sbjct: 392 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 451
Query: 296 ILNACSSLASLIE-GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+L+AC L+E G+ +H+ ++ G E + V ++L+ MY+K GD+ ++ + + +
Sbjct: 452 VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 511
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
N + W M+ A G G E L+L ++ + ++ D F+ L+A LE+G
Sbjct: 512 NIITWNAMLAANAHHGHGEEVLKLVSKMRS-FGVSLDQFSFSEGLSAAAKLAVLEEG 567
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 115/232 (49%)
Query: 148 MKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQH 207
M V ++VSW ++++G G + F++M IKP+ F + S+++AC +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 208 CSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQ 267
+H V K G + +V +++ Y + S + E +++ + + S++ YS
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 268 NLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
+ + ++ MR + ++++ ++++C L GRQ+ V+K G E + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 328 ASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELF 379
++L+ M G++D A ++ DQ S ++ + W ++ YAQ+G E+ +F
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 156/336 (46%), Gaps = 7/336 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNW-HLGLQIHAYLV 114
N I ++++ D+AL M + + + LS+C + G +HAY+V
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 474
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+G+E + + ++L+ YAKC + ++ +F + + ++W +++A + +G G +
Sbjct: 475 SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLK 534
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
L +M + + F+ + +SA + L+ LH VK GF +F+ + D Y
Sbjct: 535 LVSKMRSFGVSLDQFSFSEGLSAAA-KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMY 593
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+ C +I + + +L + + +N +ISA ++ + F EM + P T
Sbjct: 594 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFV 653
Query: 295 TILNACSSLASLIEGRQVHSLVIK-MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
++L ACS + +G + ++ + G E + ++D+ + G + EA + + +
Sbjct: 654 SLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 713
Query: 354 K-NNVLWTTMIMGYAQSG---RGLEALELFDRLLTE 385
K N+++W +++ G RG +A E +L E
Sbjct: 714 KPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 749
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 171/341 (50%), Gaps = 1/341 (0%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
AL LL M + +AL++C + G +H +V SG N + +ALV
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
Y K + ++R+V M D V+W +LI G++ + A F+ M + N T
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 465
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNET 250
+ SV+SAC+ D L+ LHA++V GF + V SL+ YA C + S L N
Sbjct: 466 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 525
Query: 251 SEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGR 310
++ I +N+M++A + + + L+L +MR S + L+A + LA L EG+
Sbjct: 526 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 585
Query: 311 QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSG 370
Q+H L +K+G E + F+ +A DMYSK G+I E +L + ++ W +I + G
Sbjct: 586 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 645
Query: 371 RGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
E F +L E + P H+ F ++LTAC+H G ++KG
Sbjct: 646 YFEEVCATFHEML-EMGIKPGHVTFVSLLTACSHGGLVDKG 685
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 181/343 (52%), Gaps = 3/343 (0%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARN-WHLGLQIHAYLVRSGYEDNLFLSSAL 128
++ M L KPS V+ + +++C ++ + + G+Q+H ++ +SG ++++S+A+
Sbjct: 41 EGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAI 100
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
+ Y + +RKVF M + VSWTSL+ G+S G+ + ++K M G + N
Sbjct: 101 LHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNE 160
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
+++ VIS+C KD + VVK G + V SL+ + +D + + +
Sbjct: 161 NSMSLVISSCGLLKDE-SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 219
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
+ SE+DTI +NS+ +AY+QN ++ ++F MR+ T+ T+L+ +
Sbjct: 220 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 279
Query: 309 GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQ 368
GR +H LV+KMG + V V + L+ MY+ G EA V Q K+ + W +++ +
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
GR L+AL L +++ + + +++ FT+ L AC F EKG
Sbjct: 340 DGRSLDALGLLCSMISSGK-SVNYVTFTSALAACFTPDFFEKG 381
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 175/354 (49%), Gaps = 3/354 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
+ +S + +D+ GM +++ + +SSC ++ LG QI +V+SG
Sbjct: 132 MVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL 191
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E L + ++L+ + A +F M D +SW S+ A ++ NG ++F +F
Sbjct: 192 ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL 251
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M H + N T+++++S +G D + +H VVK GF + V +L+ YA
Sbjct: 252 MRRFHDEVNSTTVSTLLSV-LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 310
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+ ++ L+ + KD I +NS+++++ + S DAL L M S T + L
Sbjct: 311 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 370
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
AC + +GR +H LV+ G N + +ALV MY K G++ E+R VL Q ++ V
Sbjct: 371 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA 430
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG-FLEKG 411
W +I GYA+ +AL F + E ++ ++I ++L+AC G LE+G
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERG 483
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 172/357 (48%), Gaps = 3/357 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N +++N + + + + M R + + + + T LS + G IH +V+
Sbjct: 230 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 289
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G++ + + + L+ YA V+A VF+ M D +SW SL+A F +G+ DA L
Sbjct: 290 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 349
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
M+ + N T TS ++AC D + LH VV G + + +LV Y
Sbjct: 350 LCSMISSGKSVNYVTFTSALAACF-TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 408
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
++ +S +L + +D + +N++I Y+++ AL F MR + S T+ +
Sbjct: 409 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 468
Query: 296 ILNACSSLASLIE-GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+L+AC L+E G+ +H+ ++ G E + V ++L+ MY+K GD+ ++ + + +
Sbjct: 469 VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 528
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
N + W M+ A G G E L+L ++ + ++ D F+ L+A LE+G
Sbjct: 529 NIITWNAMLAANAHHGHGEEVLKLVSKMRS-FGVSLDQFSFSEGLSAAAKLAVLEEG 584
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 122/249 (48%)
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
Y K + AR +F M V ++VSW ++++G G + F++M IKP+ F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNET 250
+ S+++AC + +H V K G + +V +++ Y + S + E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 251 SEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGR 310
+++ + + S++ YS + + ++ MR + ++++ ++++C L GR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 311 QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSG 370
Q+ V+K G E + V ++L+ M G++D A ++ DQ S ++ + W ++ YAQ+G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 371 RGLEALELF 379
E+ +F
Sbjct: 241 HIEESFRIF 249
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 156/336 (46%), Gaps = 7/336 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNW-HLGLQIHAYLV 114
N I ++++ D+AL M + + + LS+C + G +HAY+V
Sbjct: 432 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 491
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+G+E + + ++L+ YAKC + ++ +F + + ++W +++A + +G G +
Sbjct: 492 SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLK 551
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
L +M + + F+ + +SA + L+ LH VK GF +F+ + D Y
Sbjct: 552 LVSKMRSFGVSLDQFSFSEGLSAAA-KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMY 610
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+ C +I + + +L + + +N +ISA ++ + F EM + P T
Sbjct: 611 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFV 670
Query: 295 TILNACSSLASLIEGRQVHSLVIK-MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
++L ACS + +G + ++ + G E + ++D+ + G + EA + + +
Sbjct: 671 SLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 730
Query: 354 K-NNVLWTTMIMGYAQSG---RGLEALELFDRLLTE 385
K N+++W +++ G RG +A E +L E
Sbjct: 731 KPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 766
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 334 MYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHI 393
MY+K G + AR + D V+N V W TM+ G + G LE +E F R + + + P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFF-RKMCDLGIKPSSF 59
Query: 394 YFTAILTACNHAG 406
+++TAC +G
Sbjct: 60 VIASLVTACGRSG 72
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 183/351 (52%), Gaps = 35/351 (9%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
L CA+ R +HA++V+ G L++ LV+ Y KC A A +VF M D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 154 VSWTSLIAGFS-ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLH 212
++W S++ + AN G+ + + ++P+ F ++++ AC ++ H +H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKAC-ANLGSIDHGRQVH 128
Query: 213 AHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQN---- 268
H + + V SLVD YA C ++ + + + K+TI + +M+S Y+++
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 269 -------------------LCSG--------DALQLFVEMRQKKFSPTDH-TLCTILNAC 300
L SG +A +F EMR+++ D L +I+ AC
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWT 360
++LA+ I GRQVH LVI +G + VF+++AL+DMY+K D+ A+ + + ++ V WT
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++I+G AQ G+ +AL L+D +++ + P+ + F ++ AC+H GF+EKG
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSH-GVKPNEVTFVGLIYACSHVGFVEKG 358
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 157/346 (45%), Gaps = 35/346 (10%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK 143
+P V + +CA + G Q+H + + S Y ++ + S+LVD YAKC + A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 144 VFRAMKVHDQVSWTS-------------------------------LIAGFSANGQGRDA 172
VF +++V + +SWT+ LI+GF +G+G +A
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 173 FLLFKEMLGTHIKP-NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
F +F EM + + L+S++ AC ++ +H V+ GF + F+ +L+
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIA-GRQVHGLVIALGFDSCVFISNALI 280
Query: 232 DCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
D YA C + + + + +D + + S+I +Q+ + AL L+ +M P +
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 292 TLCTILNACSSLASLIEGRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
T ++ ACS + + +GR++ S+ G ++ + L+D+ + G +DEA ++
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 351 TSVK-NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYF 395
+ W ++ + GRG + + D L++ +L Y
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYI 446
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 197/408 (48%), Gaps = 68/408 (16%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
+A+ ++ M + +P++ L L+S A R G ++H+++V+ G N+ +S++L+
Sbjct: 129 KAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLL 188
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQ-------------------------------VSWTS 158
+ YAKC + A+ VF M V D V+W S
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
Query: 159 LIAGFSANGQGRDAFLLFKEML-GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVK 217
+I+GF+ G A +F +ML + + P+ FTL SV+SAC + L +H+H+V
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC-ANLEKLCIGKQIHSHIVT 307
Query: 218 RGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS-------------------------- 251
GF S V+ +L+ Y+ C ++ + L+ +
Sbjct: 308 TGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Query: 252 -------EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
++D + + +MI Y Q+ G+A+ LF M P +TL +L+ SSLA
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 305 SLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV-KNNVLWTTMI 363
SL G+Q+H +K G +V V++AL+ MY+K G+I A D ++ V WT+MI
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 364 MGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ AQ G EALELF+ +L E L PDHI + + +AC HAG + +G
Sbjct: 488 IALAQHGHAEEALELFETMLME-GLRPDHITYVGVFSACTHAGLVNQG 534
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 170/392 (43%), Gaps = 99/392 (25%)
Query: 90 LCTAL--SSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRA 147
LCT L S K+ +H +++SG +++L + L++ Y+K + ARK+F
Sbjct: 15 LCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDE 74
Query: 148 MKVH-------------------------------DQVSWTSLIAGFSANGQGRDAFLLF 176
M + D VSWT++I G+ GQ A +
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 177 KEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYAN 236
+M+ I+P FTLT+V+ A V ++ +H+ +VK G R + V SL++ YA
Sbjct: 135 GDMVKEGIEPTQFTLTNVL-ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 237 C-------------------------------KQIDDSLLLLNETSEKDTIVYNSMISAY 265
C Q+D ++ + +E+D + +NSMIS +
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 266 SQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
+Q AL +F +M R SP TL ++L+AC++L L G+Q+HS ++ G + +
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVK------------------------------ 354
V +AL+ MYS+ G ++ AR +++Q K
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 355 ---NNVLWTTMIMGYAQSGRGLEALELFDRLL 383
+ V WT MI+GY Q G EA+ LF ++
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 164/345 (47%), Gaps = 38/345 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTA-KPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I+ ++ RALD+ + M R + P + L + LS+CA +G QIH+++V
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV 306
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARK------------------------------- 143
+G++ + + +AL+ Y++C + AR+
Sbjct: 307 TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQA 366
Query: 144 --VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQ 201
+F ++K D V+WT++I G+ +G +A LF+ M+G +PN +TL +++S
Sbjct: 367 KNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVAS-S 425
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS-EKDTIVYNS 260
+L H +H VK G S V +L+ YA I + + E+DT+ + S
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 485
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG 320
MI A +Q+ + +AL+LF M + P T + +AC+ + +GRQ ++ +
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVD 545
Query: 321 SERNVFVASA-LVDMYSKGGDIDEARFVLDQTSVKNNVL-WTTMI 363
A +VD++ + G + EA+ +++ ++ +V+ W +++
Sbjct: 546 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 32/214 (14%)
Query: 220 FRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFV 279
RT+ F +++ Y+ +D + ++ ++D++ + +MI Y A+++
Sbjct: 77 LRTA-FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMG 135
Query: 280 EMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGG 339
+M ++ PT TL +L + ++ + G++VHS ++K+G NV V+++L++MY+K G
Sbjct: 136 DMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Query: 340 DIDEARFVLD-------------------------------QTSVKNNVLWTTMIMGYAQ 368
D A+FV D Q + ++ V W +MI G+ Q
Sbjct: 196 DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
G L AL++F ++L + L+PD ++L+AC
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I + ++ S A++L M +P+ L LS + + G QIH V+SG
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH-DQVSWTSLIAGFSANGQGRDAFLLFK 177
++ +S+AL+ YAK I A + F ++ D VSWTS+I + +G +A LF+
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
ML ++P+ T V SAC HA +V +G + + +
Sbjct: 505 TMLMEGLRPDHITYVGVFSACT------------HAGLVNQGRQYFDMM----------- 541
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
K +D + L+ Y M+ + + +A Q F+E + P T ++L
Sbjct: 542 KDVDKIIPTLSH--------YACMVDLFGRAGLLQEA-QEFIE--KMPIEPDVVTWGSLL 590
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
+AC ++ G+ ++ + E N SAL ++YS G +EA
Sbjct: 591 SACRVHKNIDLGKVAAERLLLLEPE-NSGAYSALANLYSACGKWEEA 636
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 179/350 (51%), Gaps = 4/350 (1%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG--YEDN 121
KN AL L+T M+ + + L C R+ G QIHA ++++G Y N
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARN 106
Query: 122 LFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
++ + LV FYAKC A+ A +F ++V + SW ++I G A + F EML
Sbjct: 107 EYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
I P+ F + +V AC G + +H +VVK G FV SL D Y C +D
Sbjct: 167 NEIFPDNFVVPNVCKAC-GALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLD 225
Query: 242 DSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
D+ + +E +++ + +N+++ Y QN + +A++LF +MR++ PT T+ T L+A +
Sbjct: 226 DASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASA 285
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTT 361
++ + EG+Q H++ I G E + + ++L++ Y K G I+ A V D+ K+ V W
Sbjct: 286 NMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNL 345
Query: 362 MIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+I GY Q G +A+ + + E+ L D + +++A L+ G
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEK-LKYDCVTLATLMSAAARTENLKLG 394
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 165/315 (52%), Gaps = 2/315 (0%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P V+ +C + G +H Y+V+SG ED +F++S+L D Y KC + DA KV
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F + + V+W +L+ G+ NG+ +A LF +M ++P T+++ +SA
Sbjct: 231 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANM-GG 289
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
++ HA + G N + SL++ Y I+ + ++ + EKD + +N +IS
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
Y Q DA+ + MR +K TL T+++A + +L G++V I+ E +
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
+ +AS ++DMY+K G I +A+ V D T K+ +LW T++ YA+SG EAL LF +
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 385 ERELTPDHIYFTAIL 399
E + P+ I + I+
Sbjct: 470 EG-VPPNVITWNLII 483
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 179/383 (46%), Gaps = 51/383 (13%)
Query: 38 NFLCRQFFIKKFS---GKTFENDCIT------KHSKNASTDRALDLLTGMNRLTAKPSKS 88
NF C+ I+ + FE D +T + + + A+ + M K
Sbjct: 317 NFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCV 376
Query: 89 VLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM 148
L T +S+ A+ N LG ++ Y +R +E ++ L+S ++D YAKC +IVDA+KVF +
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 149 KVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHC 208
D + W +L+A ++ +G +A LF M + PN T
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW----------------- 479
Query: 209 STLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS--LLLLNETSE--KDTIVYNSMISA 264
N +I SL+ Q+D++ + L ++S + I + +M++
Sbjct: 480 ---------------NLIILSLL----RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNG 520
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK-MGSER 323
QN CS +A+ +M++ P ++ L+AC+ LASL GR +H +I+ +
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
V + ++LVDMY+K GDI++A V L MI YA G EA+ L+ R L
Sbjct: 581 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALY-RSL 639
Query: 384 TERELTPDHIYFTAILTACNHAG 406
L PD+I T +L+ACNHAG
Sbjct: 640 EGVGLKPDNITITNVLSACNHAG 662
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 171/360 (47%), Gaps = 41/360 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + + +N + A+ L + M + +P++ + T LS+ A G Q HA +
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G E + L ++L++FY K I A VF M D V+W +I+G+ G DA +
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
+ M +K +C TL +++SA + + L+ + + ++ F + + +++D YA
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAA-ARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C I D+ + + T EKD I++N++++AY+++ SG+AL+LF M+ + P
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP------- 474
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR--FVLDQTS- 352
NV + ++ + G +DEA+ F+ Q+S
Sbjct: 475 ----------------------------NVITWNLIILSLLRNGQVDEAKDMFLQMQSSG 506
Query: 353 -VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ N + WTTM+ G Q+G EA+ LF R + E L P+ T L+AC H L G
Sbjct: 507 IIPNLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSACAHLASLHIG 565
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 125/264 (47%), Gaps = 9/264 (3%)
Query: 140 DARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVI 195
+A+ +F M+ + + +SWT+++ G NG +A L ++M + ++PN F++T +
Sbjct: 494 EAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 553
Query: 196 SACVGQKDALQHCSTLHAHVVKRGFRTSNFVI--CSLVDCYANCKQIDDSLLLLNETSEK 253
SAC +L T+H +++ R + S+ V SLVD YA C I+ + +
Sbjct: 554 SAC-AHLASLHIGRTIHGYII-RNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS 611
Query: 254 DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVH 313
+ + N+MISAY+ +A+ L+ + P + T+ +L+AC+ + + ++
Sbjct: 612 ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIF 671
Query: 314 SLVIKMGSERNVFVASAL-VDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRG 372
+ ++ S + L VD+ + G+ ++A ++++ K + ++ R
Sbjct: 672 TDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRK 731
Query: 373 LEALELFDRLLTERELTPDHIYFT 396
E ++ R L E E Y T
Sbjct: 732 TELVDYLSRKLLESEPENSGNYVT 755
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 107/204 (52%), Gaps = 4/204 (1%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
+N ++ A+ L M +P+ + ALS+CA + H+G IH Y++R+ +L
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 582
Query: 124 -LSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWT-SLIAGFSANGQGRDAFLLFKEMLG 181
+ ++LVD YAKC I A KVF + K++ ++ + ++I+ ++ G ++A L++ + G
Sbjct: 583 SIETSLVDMYAKCGDINKAEKVFGS-KLYSELPLSNAMISAYALYGNLKEAIALYRSLEG 641
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
+KP+ T+T+V+SAC D Q V KR + +VD A+ + +
Sbjct: 642 VGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETE 701
Query: 242 DSLLLLNETSEK-DTIVYNSMISA 264
+L L+ E K D + S++++
Sbjct: 702 KALRLIEEMPFKPDARMIQSLVAS 725
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 191/356 (53%), Gaps = 3/356 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + +N AL+ + M K + + + +++ + N G+++HAY+++
Sbjct: 355 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G++ NL + + L+D Y+KC + F M D +SWT++IAG++ N +A L
Sbjct: 415 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALEL 474
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F+++ ++ + L S++ A K L +H H++++G + LVD Y
Sbjct: 475 FRDVAKKRMEIDEMILGSILRASSVLKSMLI-VKEIHCHILRKGL-LDTVIQNELVDVYG 532
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C+ + + + KD + + SMIS+ + N +A++LF M + S L
Sbjct: 533 KCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLC 592
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
IL+A +SL++L +GR++H +++ G +A A+VDMY+ GD+ A+ V D+ K
Sbjct: 593 ILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG 652
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ +T+MI Y G G A+ELFD++ E ++PDHI F A+L AC+HAG L++G
Sbjct: 653 LLQYTSMINAYGMHGCGKAAVELFDKMRHEN-VSPDHISFLALLYACSHAGLLDEG 707
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 182/349 (52%), Gaps = 6/349 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKP-SKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I + N AL L M R+ P S L +CAK R+ G ++H+ LV
Sbjct: 151 NTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH-DQVSWTSLIAGFSANGQGRDAF 173
+ GY F+ +ALV YAK + AR++F + D V W S+++ +S +G+ +
Sbjct: 210 KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETL 269
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC-SLVD 232
LF+EM T PN +T+ S ++AC G A + +HA V+K +S +C +L+
Sbjct: 270 ELFREMHMTGPAPNSYTIVSALTACDGFSYA-KLGKEIHASVLKSSTHSSELYVCNALIA 328
Query: 233 CYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
Y C ++ + +L + + D + +NS+I Y QNL +AL+ F +M + +
Sbjct: 329 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388
Query: 293 LCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
+ +I+ A L++L+ G ++H+ VIK G + N+ V + L+DMYSK +
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH 448
Query: 353 VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
K+ + WTT+I GYAQ+ +EALELF R + ++ + D + +IL A
Sbjct: 449 DKDLISWTTVIAGYAQNDCHVEALELF-RDVAKKRMEIDEMILGSILRA 496
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 165/311 (53%), Gaps = 5/311 (1%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNL-FLSSALVDFYAKCFAIVDARKVFRAMKVHD 152
L C K R G Q+H+ + ++ L FL+ LV Y KC ++ DA KVF M
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRT 146
Query: 153 QVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLH 212
+W ++I + +NG+ A L+ M + + +++ AC +D ++ S LH
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD-IRSGSELH 205
Query: 213 AHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK-DTIVYNSMISAYSQNLCS 271
+ +VK G+ ++ F++ +LV YA + + L + EK D +++NS++S+YS + S
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN-VFVASA 330
+ L+LF EM +P +T+ + L AC + G+++H+ V+K + + ++V +A
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 331 LVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTP 390
L+ MY++ G + +A +L Q + + V W ++I GY Q+ EALE F ++ +
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS- 384
Query: 391 DHIYFTAILTA 401
D + T+I+ A
Sbjct: 385 DEVSMTSIIAA 395
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 148/311 (47%), Gaps = 12/311 (3%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I +++N AL+L + + + + +L + L + + ++ + +IH +++R G
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 518
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
D + + + LVD Y KC + A +VF ++K D VSWTS+I+ + NG +A LF+
Sbjct: 519 LDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M+ T + + L I + AL +H +++++GF + ++VD YA C
Sbjct: 578 MVETGLSADSVALL-CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCG 636
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+ + + + K + Y SMI+AY + C A++LF +MR + SP + +L
Sbjct: 637 DLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLY 696
Query: 299 ACSSLASLIEGRQV-----HSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQTS 352
ACS L EGR H ++ E V LVDM + + EA FV +
Sbjct: 697 ACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAFEFVKMMKT 752
Query: 353 VKNNVLWTTMI 363
+W ++
Sbjct: 753 EPTAEVWCALL 763
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNV-FVASALVDMYSKGGDIDEAR 345
SP + +L C ++ +GRQ+HS + K + F+A LV MY K G +D+A
Sbjct: 78 SPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAE 136
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHI-YFTAILTAC 402
V D+ + W TMI Y +G AL L+ + E P + F A+L AC
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG--VPLGLSSFPALLKAC 192
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 175/354 (49%), Gaps = 2/354 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ ++N AL M R P+ A + A R G QIHA V+ G
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
++F+ + D Y K DARK+F + + +W + I+ +G+ R+A F E
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
PN T + ++AC L LH V++ GF T V L+D Y CK
Sbjct: 200 FRRIDGHPNSITFCAFLNACSDWLH-LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
QI S ++ E K+ + + S+++AY QN A L++ R+ +D + ++L+
Sbjct: 259 QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLS 318
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
AC+ +A L GR +H+ +K ER +FV SALVDMY K G I+++ D+ KN V
Sbjct: 319 ACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 378
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTER-ELTPDHIYFTAILTACNHAGFLEKG 411
++I GYA G+ AL LF+ + TP+++ F ++L+AC+ AG +E G
Sbjct: 379 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 153/327 (46%), Gaps = 3/327 (0%)
Query: 86 SKSVLCTALSSCAKARNWHLGLQIHAYLVRS-GYEDNLFLSSALVDFYAKCFAIVDARKV 144
S L L + A + LG +HA +V++ FL++ L++ Y+K AR V
Sbjct: 5 SADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLV 64
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
R + VSWTSLI+G + NG A + F EM + PN FT A +
Sbjct: 65 LRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLP 124
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
+ +HA VK G FV CS D Y + DD+ L +E E++ +N+ IS
Sbjct: 125 VTG-KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN 183
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
+ +A++ F+E R+ P T C LNACS L G Q+H LV++ G + +
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
V V + L+D Y K I + + + KN V W +++ Y Q+ +A L+ R
Sbjct: 244 VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303
Query: 385 ERELTPDHIYFTAILTACNHAGFLEKG 411
+ T D + +++L+AC LE G
Sbjct: 304 DIVETSDFM-ISSVLSACAGMAGLELG 329
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 180/357 (50%), Gaps = 3/357 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I KN + L M P++ L+ C+K ++ LG IHA ++
Sbjct: 269 NTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIV 328
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
S +L L +AL+D Y C + +A VF + + VSW S+I+G S NG G A L+
Sbjct: 329 SDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLM 388
Query: 176 FKEMLGTHI-KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
++ +L +P+ +T ++ ISA + + H LH V K G+ S FV +L+ Y
Sbjct: 389 YRRLLRMSTPRPDEYTFSAAISA-TAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMY 447
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
++ + + + + E+D +++ MI +S+ S A+Q F+EM ++K +L
Sbjct: 448 FKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLS 507
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+++ ACS +A L +G H L I+ G + + V ALVDMY K G + A + S
Sbjct: 508 SVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNP 567
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ W +M+ Y+Q G +AL F+++L E PD + + ++L AC+H G +G
Sbjct: 568 DLKCWNSMLGAYSQHGMVEKALSFFEQIL-ENGFMPDAVTYLSLLAACSHRGSTLQG 623
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 177/358 (49%), Gaps = 4/358 (1%)
Query: 56 NDCITKHSKNAS-TDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N + +S+N A L T M KP+ S + + CA + +G +++ ++
Sbjct: 167 NALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQII 226
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+ GY DN+ + ++++ Y+ C + AR++F + D V+W ++I G N + D +
Sbjct: 227 KLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLM 286
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
F+ ML + + P FT + V++ C + + +HA ++ + +L+D Y
Sbjct: 287 FFRNMLMSGVDPTQFTYSIVLNGC-SKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMY 345
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE-MRQKKFSPTDHTL 293
+C + ++ + + + +NS+IS S+N A+ ++ +R P ++T
Sbjct: 346 CSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTF 405
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
++A + + G+ +H V K+G ER+VFV + L+ MY K + + A+ V D
Sbjct: 406 SAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKE 465
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ VLWT MI+G+++ G A++ F + E+ + D ++++ AC+ L +G
Sbjct: 466 RDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRS-DGFSLSSVIGACSDMAMLRQG 522
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 164/315 (52%), Gaps = 11/315 (3%)
Query: 91 CTALSSCAKARNWHLGLQIHAYLVRSGY---EDNLFLSSALVDFYAKCFAIVDARKVFRA 147
C +++ +AR QIHA ++ +G ++ + ++ L+ Y +C ++ ARKVF
Sbjct: 104 CVSITVLKRAR------QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDK 157
Query: 148 MKVHDQVSWTSLIAGFSANGQ-GRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQ 206
M + VS+ +L + +S N AF L M ++KPN T TS++ C +D L
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLM 217
Query: 207 HCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYS 266
S+L++ ++K G+ + V S++ Y++C ++ + + + + +D + +N+MI
Sbjct: 218 G-SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 267 QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVF 326
+N D L F M PT T +LN CS L S G+ +H+ +I S ++
Sbjct: 277 KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP 336
Query: 327 VASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTER 386
+ +AL+DMY GD+ EA +V + N V W ++I G +++G G +A+ ++ RLL
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMS 396
Query: 387 ELTPDHIYFTAILTA 401
PD F+A ++A
Sbjct: 397 TPRPDEYTFSAAISA 411
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 153/311 (49%), Gaps = 4/311 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRL-TAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I+ S+N ++A+ + + R+ T +P + A+S+ A+ + G +H +
Sbjct: 370 NSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVT 429
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+ GYE ++F+ + L+ Y K A+KVF MK D V WT +I G S G A
Sbjct: 430 KLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQ 489
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
F EM + + F+L+SVI AC L+ H ++ GF V +LVD Y
Sbjct: 490 FFIEMYREKNRSDGFSLSSVIGAC-SDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMY 548
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+ + + + + S D +NSM+ AYSQ+ AL F ++ + F P T
Sbjct: 549 GKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYL 608
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
++L ACS S ++G+ + + + + G + S +V++ SK G +DEA +++Q+
Sbjct: 609 SLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPG 668
Query: 355 NNV--LWTTMI 363
NN LW T++
Sbjct: 669 NNQAELWRTLL 679
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 136/297 (45%), Gaps = 18/297 (6%)
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRD---------AF 173
+ ++ L+ Y +C ++ ARKVF M + V+ L A F G +F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG---FRTSNFVICSL 230
+ M I + LT CV L+ +HA V+ G S + +L
Sbjct: 83 QMIFFMPLNEIASSVVELT---RKCV-SITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL-CSGDALQLFVEMRQKKFSPT 289
+ Y C ++ + + ++ ++ + YN++ SAYS+N + A L M + P
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
T +++ C+ L ++ G ++S +IK+G NV V ++++ MYS GD++ AR + D
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
+ ++ V W TMI+G ++ + + L F +L + P ++ +L C+ G
Sbjct: 259 CVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS-GVDPTQFTYSIVLNGCSKLG 314
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 179/362 (49%), Gaps = 40/362 (11%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P+K + + A+ + LG +H V+S ++F++++L+ Y C + A KV
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD- 203
F +K D VSW S+I GF G A LFK+M +K + T+ V+SAC ++
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 204 --ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLL--------------- 246
Q CS + + V +N +++D Y C I+D+ L
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLAN----AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 304
Query: 247 ----------------LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMR-QKKFSPT 289
LN +KD + +N++ISAY QN +AL +F E++ QK
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLN 364
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
TL + L+AC+ + +L GR +HS + K G N V SAL+ MYSK GD++++R V +
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLE 409
++ +W+ MI G A G G EA+++F + + E + P+ + FT + AC+H G ++
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK-MQEANVKPNGVTFTNVFCACSHTGLVD 483
Query: 410 KG 411
+
Sbjct: 484 EA 485
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 38/367 (10%)
Query: 79 NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYA-KCFA 137
N+ T +S + + C R Q H +++R+G + + +S L A FA
Sbjct: 22 NQPTTNNERSRHISLIERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78
Query: 138 IVD-ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG-THIKPNCFTLTSVI 195
++ ARKVF + + +W +LI +++ + F +M+ + PN +T +I
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 196 SACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDT 255
A + +L +LH VK + FV SL+ CY +C +D + + EKD
Sbjct: 139 KA-AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 256 IVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSL 315
+ +NSMI+ + Q AL+LF +M + + T+ +L+AC+ + +L GRQV S
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 316 VIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYA-------- 367
+ + N+ +A+A++DMY+K G I++A+ + D K+NV WTTM+ GYA
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 368 -----------------------QSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
Q+G+ EAL +F L ++ + + I + L+AC
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 405 AGFLEKG 411
G LE G
Sbjct: 378 VGALELG 384
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 165/357 (46%), Gaps = 35/357 (9%)
Query: 41 CRQFFIKKFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKA 100
C+ F K N I + S D+AL+L M K S + LS+CAK
Sbjct: 186 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 245
Query: 101 RNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWT--- 157
RN G Q+ +Y+ + NL L++A++D Y KC +I DA+++F AM+ D V+WT
Sbjct: 246 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 305
Query: 158 ----------------------------SLIAGFSANGQGRDAFLLFKEM-LGTHIKPNC 188
+LI+ + NG+ +A ++F E+ L ++K N
Sbjct: 306 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 365
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
TL S +SAC Q AL+ +H+++ K G R + V +L+ Y+ C ++ S + N
Sbjct: 366 ITLVSTLSAC-AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
++D V+++MI + + C +A+ +F +M++ P T + ACS + E
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 309 GRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNNVLWTTMI 363
+ H + G + +VD+ + G +++A +F+ + +W ++
Sbjct: 485 AESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 184/360 (51%), Gaps = 6/360 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + +N + AL + M + + + + L C ++ +G +H +
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEE 246
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
D + + +ALV+ Y KC + +AR VF M+ D ++WT +I G++ +G +A L
Sbjct: 247 KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALEL 306
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
+ M ++PN T+ S++S C G + LH V++ + + SL+ YA
Sbjct: 307 CRLMQFEGVRPNAVTIASLVSVC-GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYA 365
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
CK++D + + S+ T ++++I+ QN DAL LF MR++ P TL +
Sbjct: 366 KCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNS 425
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL----DQT 351
+L A ++LA L + +H + K G ++ A+ LV +YSK G ++ A + ++
Sbjct: 426 LLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 352 SVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
K+ VLW +I GY G G AL++F ++ +TP+ I FT+ L AC+H+G +E+G
Sbjct: 486 KSKDVVLWGALISGYGMHGDGHNALQVFMEMV-RSGVTPNEITFTSALNACSHSGLVEEG 544
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 147/299 (49%), Gaps = 5/299 (1%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
+H +++ G LS+ V YA C I ARK+F M +S+ +I + G
Sbjct: 37 LHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGL 95
Query: 169 GRDAFLLFKEMLGTHIK--PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFV 226
DA +F M+ +K P+ +T V A G+ +++ +H +++ F +V
Sbjct: 96 YHDAISVFIRMVSEGVKCVPDGYTYPFVAKAA-GELKSMKLGLVVHGRILRSWFGRDKYV 154
Query: 227 ICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
+L+ Y N +++ + + + +D I +N+MIS Y +N DAL +F M +
Sbjct: 155 QNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV 214
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARF 346
T+ ++L C L L GR VH LV + + V +ALV+MY K G +DEARF
Sbjct: 215 DLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARF 274
Query: 347 VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
V D+ ++ + WT MI GY + G ALEL RL+ + P+ + ++++ C A
Sbjct: 275 VFDRMERRDVITWTCMINGYTEDGDVENALELC-RLMQFEGVRPNAVTIASLVSVCGDA 332
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFS 164
LGL +H ++RS + + ++ +AL+ Y + AR VF MK D +SW ++I+G+
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
NG DA ++F M+ + + T+ S++ C KD L+ +H V ++
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKD-LEMGRNVHKLVEEKRLGDKI 253
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
V +LV+ Y C ++D++ + + +D I + MI+ Y+++ +AL+L M+ +
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
P T+ ++++ C + +G+ +H ++ ++ + ++L+ MY+K +D
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
V S + W+ +I G Q+ +AL LF R+ E ++ P+ ++L A
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE-DVEPNIATLNSLLPA 429
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 175/321 (54%), Gaps = 9/321 (2%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKC---FAIVDARKVFRAMKV 150
+S C R +QI AY ++S ED F++ L++F + ++ AR +F AM
Sbjct: 36 ISKCNSLREL---MQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSE 91
Query: 151 HDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCST 210
D V + S+ G+S + F LF E+L I P+ +T S++ AC K AL+
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK-ALEEGRQ 150
Query: 211 LHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLC 270
LH +K G + +V +L++ Y C+ +D + + + E + YN+MI+ Y++
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 271 SGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASA 330
+AL LF EM+ K P + TL ++L++C+ L SL G+ +H K + V V +A
Sbjct: 211 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 270
Query: 331 LVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTP 390
L+DM++K G +D+A + ++ K+ W+ MI+ YA G+ +++ +F+R+ +E + P
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE-NVQP 329
Query: 391 DHIYFTAILTACNHAGFLEKG 411
D I F +L AC+H G +E+G
Sbjct: 330 DEITFLGLLNACSHTGRVEEG 350
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 148/281 (52%), Gaps = 3/281 (1%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P + L +CA A+ G Q+H ++ G +DN+++ L++ Y +C + AR V
Sbjct: 127 PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV 186
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F + V + ++I G++ + +A LF+EM G ++KPN TL SV+S+C +
Sbjct: 187 FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC-ALLGS 245
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
L +H + K F V +L+D +A C +DD++ + + KDT +++MI A
Sbjct: 246 LDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVA 305
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHS-LVIKMGSER 323
Y+ + + ++ +F MR + P + T +LNACS + EGR+ S +V K G
Sbjct: 306 YANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP 365
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSV-KNNVLWTTMI 363
++ ++VD+ S+ G++++A +D+ + +LW ++
Sbjct: 366 SIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N IT +++ + AL L M KP++ L + LSSCA + LG IH Y +
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ + +++AL+D +AKC ++ DA +F M+ D +W+++I ++ +G+ + L+
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F+ M +++P+ T +++AC + V K G S S+VD +
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 236 NCKQIDDSLLLLNE 249
++D+ +++
Sbjct: 379 RAGNLEDAYEFIDK 392
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 170/318 (53%), Gaps = 2/318 (0%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
L++ K + LG Q+H ++ G + L +S++L++ Y K AR VF M D
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL 381
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
+SW S+IAG + NG +A LF ++L +KP+ +T+TSV+ A + L +H
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHV 441
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
H +K + +FV +L+D Y+ + + ++ +L E D + +N+M++ Y+Q+
Sbjct: 442 HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHK 500
Query: 274 ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVD 333
L+LF M ++ D TL T+ C L ++ +G+QVH+ IK G + +++V+S ++D
Sbjct: 501 TLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILD 560
Query: 334 MYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHI 393
MY K GD+ A+F D V ++V WTTMI G ++G A +F ++ L PD
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL-PDEF 619
Query: 394 YFTAILTACNHAGFLEKG 411
+ A + LE+G
Sbjct: 620 TIATLAKASSCLTALEQG 637
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 176/357 (49%), Gaps = 4/357 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAK-ARNWHLGLQIHAYLV 114
N I ++N A+ L + R KP + + + L + + L Q+H + +
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAI 444
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+ + F+S+AL+D Y++ + +A +F D V+W +++AG++ + G
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLK 503
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
LF M + + FTL +V C G A+ +HA+ +K G+ +V ++D Y
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTC-GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMY 562
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
C + + + D + + +MIS +N A +F +MR P + T+
Sbjct: 563 VKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIA 622
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
T+ A S L +L +GRQ+H+ +K+ + FV ++LVDMY+K G ID+A + + +
Sbjct: 623 TLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM 682
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
N W M++G AQ G G E L+LF + + + PD + F +L+AC+H+G + +
Sbjct: 683 NITAWNAMLVGLAQHGEGKETLQLFKQ-MKSLGIKPDKVTFIGVLSACSHSGLVSEA 738
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 124/294 (42%), Gaps = 34/294 (11%)
Query: 110 HAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQG 169
H Y + G + + F++ ALV+ Y K + + + +F M D V W ++ + G
Sbjct: 168 HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFK 227
Query: 170 RDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS 229
+A L + + PN TL + DA Q
Sbjct: 228 EEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQ----------------------- 264
Query: 230 LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
V +AN + +S + I N +S Y + L+ F +M +
Sbjct: 265 -VKSFANGN---------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECD 314
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
T +L + SL G+QVH + +K+G + + V+++L++MY K AR V D
Sbjct: 315 QVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD 374
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
S ++ + W ++I G AQ+G +EA+ LF +LL L PD T++L A +
Sbjct: 375 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL-RCGLKPDQYTMTSVLKAAS 427
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQN-LC 270
HA ++ F+I +L+ Y+ C + + + ++ ++D + +NS+++AY+Q+ C
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 271 SGDALQ----LFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVF 326
+ +Q LF +RQ + TL +L C + H K+G + + F
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 327 VASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
VA ALV++Y K G + E + + ++ ++ VLW M+ Y + G EA++L
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFS 164
LG HA ++ FL + L+ Y+KC ++ AR+VF M D VSW S++A ++
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 165 ANGQG-----RDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG 219
+ + + AFLLF+ + + + TL+ ++ C+ + + H + K G
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCL-HSGYVWASESFHGYACKIG 175
Query: 220 FRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFV 279
FV +LV+ Y ++ + +L E +D +++N M+ AY + +A+ L
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235
Query: 280 EMRQKKFSPTDHTL 293
+P + TL
Sbjct: 236 AFHSSGLNPNEITL 249
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
NA +S + L+ G+ H+ ++ F+ + L+ MYSK G + AR V D+ ++ V
Sbjct: 48 NAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLV 106
Query: 358 LWTTMIMGYAQSGRGL-----EALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
W +++ YAQS + +A LF R+L + + + + +L C H+G++
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYV 161
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 191/365 (52%), Gaps = 10/365 (2%)
Query: 52 KTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHA 111
K N I K +A+ +L+ + PS+ + C + L++H
Sbjct: 46 KISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHR 101
Query: 112 YLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRD 171
+++ +G + + FL++ L+ Y+ ++ ARKVF + W +L + G G +
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHC---STLHAHVVKRGFRTSNFVIC 228
L+ +M ++ + FT T V+ ACV + + H +HAH+ +RG+ + +++
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 229 SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQ--KKF 286
+LVD YA +D + + ++ + +++MI+ Y++N + +AL+ F EM + K
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARF 346
SP T+ ++L AC+SLA+L +G+ +H +++ G + + V SALV MY + G ++ +
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 347 VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
V D+ ++ V W ++I Y G G +A+++F+ +L +P + F ++L AC+H G
Sbjct: 342 VFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN-GASPTPVTFVSVLGACSHEG 400
Query: 407 FLEKG 411
+E+G
Sbjct: 401 LVEEG 405
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 159/305 (52%), Gaps = 13/305 (4%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKAR---NWHL--GLQIHAYLVRSGYEDNLF 123
+ L L MNR+ + + L +C + N HL G +IHA+L R GY +++
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVN-HLMKGKEIHAHLTRRGYSSHVY 218
Query: 124 LSSALVDFYAKCFAIVD-ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML-- 180
+ + LVD YA+ F VD A VF M V + VSW+++IA ++ NG+ +A F+EM+
Sbjct: 219 IMTTLVDMYAR-FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 181 GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
PN T+ SV+ AC AL+ +H ++++RG + VI +LV Y C ++
Sbjct: 278 TKDSSPNSVTMVSVLQACASLA-ALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 241 DDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
+ + + ++D + +NS+IS+Y + A+Q+F EM SPT T ++L AC
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 301 SSLASLIEGRQVHSLVIK-MGSERNVFVASALVDMYSKGGDIDE-ARFVLDQTSVKNNVL 358
S + EG+++ + + G + + + +VD+ + +DE A+ V D + +
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 359 WTTMI 363
W +++
Sbjct: 457 WGSLL 461
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 178/362 (49%), Gaps = 11/362 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTA-KPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I+ S + + L M R+ P+ S + + +A G +H Y
Sbjct: 173 NAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCT 232
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
R G+ ++L + + ++D YAK I+ AR+VF ++V+W+++I G+ N ++A
Sbjct: 233 RMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGE 292
Query: 175 LFKEMLGTHIKPNCFTLTSV-----ISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS 229
+F +ML + N +T V + C D L +H + VK GF V +
Sbjct: 293 VFFQML---VNDNVAMVTPVAIGLILMGCARFGD-LSGGRCVHCYAVKAGFILDLTVQNT 348
Query: 230 LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
++ YA + D+ +E KD I YNS+I+ N ++ +LF EMR P
Sbjct: 349 IISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPD 408
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
TL +L ACS LA+L G H + G N + +AL+DMY+K G +D A+ V D
Sbjct: 409 ITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFD 468
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLE 409
++ V W TM+ G+ G G EAL LF+ + E + PD + AIL+AC+H+G ++
Sbjct: 469 TMHKRDIVSWNTMLFGFGIHGLGKEALSLFNS-MQETGVNPDEVTLLAILSACSHSGLVD 527
Query: 410 KG 411
+G
Sbjct: 528 EG 529
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 170/330 (51%), Gaps = 20/330 (6%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSA-----LVDFYAKCFAIVDARKVFRAM 148
L +C ++RN LG IH +L++ +L LSS+ L YA C + AR VF +
Sbjct: 6 LETCIRSRNLVLGQVIHQHLLKR----SLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 149 KVH---DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDAL 205
H + ++W +I +++N A L+ +ML + ++P +T V+ AC G + A+
Sbjct: 62 P-HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLR-AI 119
Query: 206 QHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAY 265
+H+HV F T +V +LVD YA C +++ ++ + +E ++D + +N+MIS +
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 266 SQNLCSGDALQLFVEMRQ-KKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
S + C D + LF++MR+ SP T+ + A +L EG+ VH +MG +
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
+ V + ++D+Y+K I AR V D KN V W+ MI GY ++ EA E+F ++L
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 385 ERE---LTPDHIYFTAILTACNHAGFLEKG 411
+TP + IL C G L G
Sbjct: 300 NDNVAMVTP--VAIGLILMGCARFGDLSGG 327
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 171/356 (48%), Gaps = 5/356 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I ++ N ++ALDL M +P+K L +CA R G IH+++ S +
Sbjct: 75 IRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDF 134
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
++++ +ALVDFYAKC + A KVF M D V+W ++I+GFS + D LF +
Sbjct: 135 ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLD 194
Query: 179 MLGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
M + PN T+ + A +G+ AL+ +H + + GF V ++D YA
Sbjct: 195 MRRIDGLSPNLSTIVGMFPA-LGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM--RQKKFSPTDHTLCT 295
K I + + + +K+ + +++MI Y +N +A ++F +M T +
Sbjct: 254 KCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL 313
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
IL C+ L GR VH +K G ++ V + ++ Y+K G + +A + +K+
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ + ++I G + R E+ LF + T + PD +LTAC+H L G
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTS-GIRPDITTLLGVLTACSHLAALGHG 428
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 138/255 (54%), Gaps = 7/255 (2%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
L CA+ + G +H Y V++G+ +L + + ++ FYAK ++ DA + F + + D
Sbjct: 315 LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDV 374
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
+S+ SLI G N + ++F LF EM + I+P+ TL V++AC AL H S+ H
Sbjct: 375 ISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC-SHLAALGHGSSCHG 433
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
+ V G+ + + +L+D Y C ++D + + + ++D + +N+M+ + + +
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKE 493
Query: 274 ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVA----S 329
AL LF M++ +P + TL IL+ACS + EG+Q+ + + + + NV +
Sbjct: 494 ALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR--GDFNVIPRIDHYN 551
Query: 330 ALVDMYSKGGDIDEA 344
+ D+ ++ G +DEA
Sbjct: 552 CMTDLLARAGYLDEA 566
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
Query: 193 SVISACVGQKDALQHCSTLHAHVVKRGFR-TSNFVICSLVDCYANCKQIDDSLLLLNETS 251
S++ C+ ++ L +H H++KR +S+ V+ +L YA+C +++ + + +E
Sbjct: 4 SLLETCIRSRN-LVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 252 EK--DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEG 309
+ I ++ MI AY+ N + AL L+ +M PT +T +L AC+ L ++ +G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 310 RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQS 369
+ +HS V +++V +ALVD Y+K G+++ A V D+ ++ V W MI G++
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 370 GRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ + LF + L+P+ + A AG L +G
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 165/324 (50%), Gaps = 2/324 (0%)
Query: 88 SVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRA 147
+ L LS C + IHA + SGY+ + + + L+ Y KC V R VF
Sbjct: 156 ATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDG 215
Query: 148 MKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQH 207
M + ++ T++I+G N D LF M + PN T S ++AC G + ++
Sbjct: 216 MSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEG 275
Query: 208 CSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQ 267
+HA + K G + + +L+D Y+ C I+D+ + T+E D + ++ +Q
Sbjct: 276 -QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 268 NLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
N +A+Q F+ M Q + + +L SL G+Q+HSLVIK N FV
Sbjct: 335 NGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFV 394
Query: 328 ASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERE 387
+ L++MYSK GD+ +++ V + +N V W +MI +A+ G GL AL+L++ +T E
Sbjct: 395 NNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEE-MTTLE 453
Query: 388 LTPDHIYFTAILTACNHAGFLEKG 411
+ P + F ++L AC+H G ++KG
Sbjct: 454 VKPTDVTFLSLLHACSHVGLIDKG 477
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 162/307 (52%), Gaps = 13/307 (4%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
+N + L L + M R P+ +AL++C+ ++ G QIHA L + G E L
Sbjct: 233 ENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELC 292
Query: 124 LSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML--G 181
+ SAL+D Y+KC +I DA +F + D+VS T ++ G + NG +A F ML G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 182 THIKPNCFTLTSVISACVGQK---DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
I N V+SA +G ++L LH+ V+KR F + FV L++ Y+ C
Sbjct: 353 VEIDAN------VVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCG 406
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+ DS + +++ + +NSMI+A++++ AL+L+ EM + PTD T ++L+
Sbjct: 407 DLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLH 466
Query: 299 ACSSLASLIEGRQVHSLVIKM-GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
ACS + + +GR++ + + ++ G E + ++DM + G + EA+ +D +K +
Sbjct: 467 ACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDC 526
Query: 358 -LWTTMI 363
+W ++
Sbjct: 527 KIWQALL 533
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 21/305 (6%)
Query: 94 LSSCAKARNW--HLGLQIHAYLVRSG----------YEDNLFLSSALVDFYAKCFAIVDA 141
LS C + W HLG +HA ++++ + + L + ++L+ YAKC +VDA
Sbjct: 51 LSICGR-EGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDA 109
Query: 142 RKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQ 201
K+F M + D +S + GF N + F+L K MLG+ + TLT V+S C
Sbjct: 110 IKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHA-TLTIVLSVC--- 165
Query: 202 KDALQHC---STLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVY 258
D + C +HA + G+ V L+ Y C + + S ++ I
Sbjct: 166 -DTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITL 224
Query: 259 NSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK 318
++IS +N D L+LF MR+ P T + L ACS ++EG+Q+H+L+ K
Sbjct: 225 TAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK 284
Query: 319 MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
G E + + SAL+DMYSK G I++A + + T+ + V T +++G AQ+G EA++
Sbjct: 285 YGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQF 344
Query: 379 FDRLL 383
F R+L
Sbjct: 345 FIRML 349
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 73/136 (53%)
Query: 63 SKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNL 122
++N S + A+ M + + +V+ L + LG Q+H+ +++ + N
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
F+++ L++ Y+KC + D++ VFR M + VSW S+IA F+ +G G A L++EM
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL 452
Query: 183 HIKPNCFTLTSVISAC 198
+KP T S++ AC
Sbjct: 453 EVKPTDVTFLSLLHAC 468
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 173/328 (52%), Gaps = 3/328 (0%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRS-GYEDNLFLSSALVDFYAKCFAIVDARK 143
P+ +L T L + LG ++HA++++S Y + F+ S L+D Y KC + R+
Sbjct: 314 PNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRR 373
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD 203
VF K + +SWT+L++G++ANG+ A M +P+ T+ +V+ C +
Sbjct: 374 VFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVC-AELR 432
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
A++ +H + +K F + ++ SL+ Y+ C + + L + +++ + +MI
Sbjct: 433 AIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMID 492
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
Y +N +++F M K P T+ +L CS L +L G+++H ++K E
Sbjct: 493 CYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFES 552
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
FV++ ++ MY K GD+ A F D +VK ++ WT +I Y + +A+ F++++
Sbjct: 553 IPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMV 612
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
+ R TP+ FTA+L+ C+ AGF+++
Sbjct: 613 S-RGFTPNTFTFTAVLSICSQAGFVDEA 639
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 185/405 (45%), Gaps = 10/405 (2%)
Query: 15 PPSGSLRLPDLRHLHAFPVSDAKNFLCRQFFIKKFSGKTFENDCITKH----SKNASTDR 70
P +R R P K F R F + I + ++ + +
Sbjct: 35 PAKSPIRPSRTRRPSTSPAKKPKPFRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEV 94
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
AL +L + + + + L +C + ++ G Q+H ++ +G E N FL + LV
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGR--DAFLLFKEMLGTHIKPNC 188
Y C ++ DA+KVF + SW +L+ G +G+ R D F EM + N
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
++L++V + G AL+ HA +K G S F+ SLVD Y C ++ + + +
Sbjct: 215 YSLSNVFKSFAGA-SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFD 273
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLI 307
E E+D +V+ +MI+ + N +AL LF M ++K P L TIL + +L
Sbjct: 274 EIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALK 333
Query: 308 EGRQVHSLVIKMGSE-RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGY 366
G++VH+ V+K + FV S L+D+Y K GD+ R V + +N + WT ++ GY
Sbjct: 334 LGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGY 393
Query: 367 AQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
A +GR +AL + + PD + +L C +++G
Sbjct: 394 AANGRFDQALRSIV-WMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 172/342 (50%), Gaps = 4/342 (1%)
Query: 72 LDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDF 131
L T M L + L S A A GL+ HA +++G +++FL ++LVD
Sbjct: 199 LSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDM 258
Query: 132 YAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH-IKPNCFT 190
Y KC + AR+VF + D V W ++IAG + N + +A LF+ M+ I PN
Sbjct: 259 YFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVI 318
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVK-RGFRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
LT+++ +G AL+ +HAHV+K + + FV L+D Y C + +
Sbjct: 319 LTTILPV-LGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG 377
Query: 250 TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEG 309
+ +++ I + +++S Y+ N AL+ V M+Q+ F P T+ T+L C+ L ++ +G
Sbjct: 378 SKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Query: 310 RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQS 369
+++H +K NV + ++L+ MYSK G + + D+ +N WT MI Y ++
Sbjct: 438 KEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVEN 497
Query: 370 GRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+E+F RL+ + PD + +LT C+ L+ G
Sbjct: 498 CDLRAGIEVF-RLMLLSKHRPDSVTMGRVLTVCSDLKALKLG 538
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 145/291 (49%), Gaps = 8/291 (2%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
++ ++ N D+AL + M + +P + T L CA+ R G +IH Y +++ +
Sbjct: 390 MSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF 449
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
N+ L ++L+ Y+KC ++F ++ + +WT++I + N R +F+
Sbjct: 450 LPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRL 509
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
ML + +P+ T+ V++ C K AL+ LH H++K+ F + FV ++ Y C
Sbjct: 510 MLLSKHRPDSVTMGRVLTVCSDLK-ALKLGKELHGHILKKEFESIPFVSARIIKMYGKCG 568
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+ + + + K ++ + ++I AY N DA+ F +M + F+P T +L+
Sbjct: 569 DLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLS 628
Query: 299 ACSSLASLIEGRQVHSLVIKM----GSERNVFVASALVDMYSKGGDIDEAR 345
CS + E + +L+++M SE + S ++++ ++ G ++EA+
Sbjct: 629 ICSQAGFVDEAYRFFNLMLRMYNLQPSEEHY---SLVIELLNRCGRVEEAQ 676
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 182/345 (52%), Gaps = 43/345 (12%)
Query: 106 GLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSA 165
G +IHA ++++G++ +L +S L+ + KC + AR+VF + ++ +I+G+
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 166 NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDAL----QHCSTLHAHVVKRGFR 221
+G ++ LL + M + K + +TL+ V+ A + + C +HA ++K
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 222 TSNFVICSLVDCYANCKQ-------------------------------IDDSLLLLNET 250
+ +I +LVD Y + ++D+ + N T
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 251 SEKDTIVYNSMISAYSQNLCSGD----ALQLFVEMRQKKFSPTDHTLCTILNACSSLASL 306
KD +VYN+M+ +S+ SG+ ++ +++ M++ F P T +++ ACS L S
Sbjct: 233 KVKDIVVYNAMVEGFSR---SGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSH 289
Query: 307 IEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGY 366
G+QVH+ ++K G ++ + S+L+DMY+K G I++AR V DQ KN WT+MI GY
Sbjct: 290 EVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 367 AQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++G EALELF R + E + P+++ F L+AC+H+G ++KG
Sbjct: 350 GKNGNPEEALELFTR-MKEFRIEPNYVTFLGALSACSHSGLVDKG 393
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 50/299 (16%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ-GRDAFLLFK 177
++N+ ++++ Y + DA ++F KV D V + +++ GFS +G+ + + ++
Sbjct: 203 DENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYI 262
Query: 178 EMLGTHIKPNCFTLTSVISAC-------VGQKDALQHCSTLHAHVVKRGFRTSNFVICSL 230
M PN T SVI AC VGQ+ +HA ++K G T + SL
Sbjct: 263 SMQRAGFHPNISTFASVIGACSVLTSHEVGQQ--------VHAQIMKSGVYTHIKMGSSL 314
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
+D YA C I+D+ + ++ EK+ + SMI Y +N +AL+LF M++ + P
Sbjct: 315 LDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNY 374
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
T L+ACS HS ++ G E + ++ YS ++ ++D
Sbjct: 375 VTFLGALSACS-----------HSGLVDKGYE----IFESMQRDYSMKPKMEHYACIVD- 418
Query: 351 TSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLE 409
+MG A G +A E F R + ER PD + A+L++CN G +E
Sbjct: 419 ------------LMGRA--GDLNKAFE-FARAMPER---PDSDIWAALLSSCNLHGNVE 459
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 56 NDCITKHSKNAST-DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N + S++ T R++D+ M R P+ S + + +C+ + +G Q+HA ++
Sbjct: 241 NAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIM 300
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+SG ++ + S+L+D YAKC I DAR+VF M+ + SWTS+I G+ NG +A
Sbjct: 301 KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALE 360
Query: 175 LFKEMLGTHIKPNCFTLTSVISAC 198
LF M I+PN T +SAC
Sbjct: 361 LFTRMKEFRIEPNYVTFLGALSAC 384
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 182/356 (51%), Gaps = 1/356 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + ++ + +L M P + L S +K N QIH Y++R
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
++FL+SAL+D Y KC + A+ +F D V +T++I+G+ NG D+ +
Sbjct: 369 HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEM 428
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F+ ++ I PN TL S++ +G AL+ LH ++K+GF + C+++D YA
Sbjct: 429 FRWLVKVKISPNEITLVSILPV-IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C +++ + + S++D + +NSMI+ +Q+ A+ +F +M ++
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
L+AC++L S G+ +H +IK +V+ S L+DMY+K G++ A V KN
Sbjct: 548 ALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKN 607
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V W ++I G+ ++L LF ++ + + PD I F I+++C H G +++G
Sbjct: 608 IVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 185/361 (51%), Gaps = 8/361 (2%)
Query: 48 KFSGKTFENDCI------TKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKAR 101
K + + DC+ ++K + D + + M P+ LS CA
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 102 NWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIA 161
LG+Q+H +V SG + + ++L+ Y+KC DA K+FR M D V+W +I+
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 162 GFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFR 221
G+ +G ++ F EM+ + + P+ T +S++ + V + + L++C +H ++++
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS-VSKFENLEYCKQIHCYIMRHSIS 372
Query: 222 TSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM 281
F+ +L+D Y C+ + + + ++ + D +V+ +MIS Y N D+L++F +
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432
Query: 282 RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDI 341
+ K SP + TL +IL L +L GR++H +IK G + + A++DMY+K G +
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM 492
Query: 342 DEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
+ A + ++ S ++ V W +MI AQS A+++F R + + D + +A L+A
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF-RQMGVSGICYDCVSISAALSA 551
Query: 402 C 402
C
Sbjct: 552 C 552
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 150/318 (47%), Gaps = 4/318 (1%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
L +C+ G Q+HA+L+ + + + ++ YA C + D K+F + +
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 154 V--SWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTL 211
W S+I+ F NG A + +ML + P+ T ++ ACV K+ + L
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN-FKGIDFL 160
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCS 271
V G + FV SL+ Y +ID L + +KD +++N M++ Y++
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASAL 331
++ F MR + SP T +L+ C+S + G Q+H LV+ G + + ++L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 332 VDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPD 391
+ MYSK G D+A + S + V W MI GY QSG E+L F +++ L PD
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL-PD 339
Query: 392 HIYFTAILTACNHAGFLE 409
I F+++L + + LE
Sbjct: 340 AITFSSLLPSVSKFENLE 357
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 179/364 (49%), Gaps = 9/364 (2%)
Query: 51 GKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIH 110
G + N I +S+ + D L L M +P S + +C G +
Sbjct: 80 GVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVW 139
Query: 111 AYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGR 170
V GY++++F+ S++++ Y KC + +A +F M D + WT+++ GF+ G+
Sbjct: 140 CKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSL 199
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSL 230
A ++EM + + ++ A G + ++H ++ + G + V SL
Sbjct: 200 KAVEFYREMQNEGFGRDRVVMLGLLQAS-GDLGDTKMGRSVHGYLYRTGLPMNVVVETSL 258
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
VD YA I+ + + + K + + S+IS ++QN + A + VEM+ F P
Sbjct: 259 VDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDL 318
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVF---VASALVDMYSKGGDIDEARFV 347
TL +L ACS + SL GR VH ++K R+V A+AL+DMYSK G + +R +
Sbjct: 319 VTLVGVLVACSQVGSLKTGRLVHCYILK----RHVLDRVTATALMDMYSKCGALSSSREI 374
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGF 407
+ K+ V W TMI Y G G E + LF + +TE + PDH F ++L+A +H+G
Sbjct: 375 FEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK-MTESNIEPDHATFASLLSALSHSGL 433
Query: 408 LEKG 411
+E+G
Sbjct: 434 VEQG 437
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 151/308 (49%), Gaps = 9/308 (2%)
Query: 108 QIHAYLVRSGYEDNLFLSSALV-DFYAKCFAIVD---ARKVFRAMKVHDQVSWTSLIAGF 163
QIHA+++ +G NL S++ D A C I + ARKVF + + S+I +
Sbjct: 35 QIHAFVISTG---NLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVY 91
Query: 164 SANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTS 223
S + L+ +M+ I+P+ T T I AC+ L+ + V G++
Sbjct: 92 SRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGL-VLEKGEAVWCKAVDFGYKND 150
Query: 224 NFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQ 283
FV S+++ Y C ++D++ +L + +++D I + +M++ ++Q S A++ + EM+
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 284 KKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDE 343
+ F + +L A L GR VH + + G NV V ++LVDMY+K G I+
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 344 ARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
A V + K V W ++I G+AQ+G +A E + PD + +L AC+
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVE-MQSLGFQPDLVTLVGVLVACS 329
Query: 404 HAGFLEKG 411
G L+ G
Sbjct: 330 QVGSLKTG 337
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 150/315 (47%), Gaps = 16/315 (5%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
+T ++ + +A++ M + V+ L + + +G +H YL R+G
Sbjct: 189 VTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGL 248
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
N+ + ++LVD YAK I A +VF M VSW SLI+GF+ NG AF E
Sbjct: 249 PMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVE 308
Query: 179 MLGTHIKPNCFTLTSVISAC--VG--QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
M +P+ TL V+ AC VG + L HC L HV+ R T +L+D Y
Sbjct: 309 MQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTAT------ALMDMY 362
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+ C + S + KD + +N+MIS Y + + + LF++M + P T
Sbjct: 363 SKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFA 422
Query: 295 TILNACSSLASLIEGRQVHSLVI---KMGSERNVFVASALVDMYSKGGDIDEARFVLDQT 351
++L+A S + +G+ S++I K+ +V L+D+ ++ G ++EA +++
Sbjct: 423 SLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYV--CLIDLLARAGRVEEALDMINSE 480
Query: 352 SVKNNV-LWTTMIMG 365
+ N + +W ++ G
Sbjct: 481 KLDNALPIWVALLSG 495
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 186/345 (53%), Gaps = 9/345 (2%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
D +L + M + +P+ + + SC+ A +G Q+H +++GYE +S+A
Sbjct: 273 DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNAT 329
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
+ Y+ A KVF +++ D V+W ++I+ ++ G+ A ++K M +KP+
Sbjct: 330 MTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDE 389
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
FT S+++ + D L+ + A ++K G + + +L+ Y+ QI+ + LL
Sbjct: 390 FTFGSLLATSL-DLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFE 445
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK--KFSPTDHTLCTILNACSSLASL 306
+ K+ I +N++IS + N + L+ F + + + P +TL T+L+ C S +SL
Sbjct: 446 RSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSL 505
Query: 307 IEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGY 366
+ G Q H+ V++ G + + +AL++MYS+ G I + V +Q S K+ V W ++I Y
Sbjct: 506 MLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAY 565
Query: 367 AQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ G G A+ + + E ++ PD F+A+L+AC+HAG +E+G
Sbjct: 566 SRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 172/351 (49%), Gaps = 14/351 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N IT ++ + +++L M++L + K T LS C + G Q+H+ +++
Sbjct: 159 NAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYG-SLDFGKQVHSLVIK 217
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRA--MKVHDQVSWTSLIAGFSANGQGRD-A 172
+G+ + +AL+ Y C +VDA VF + V DQV++ +I G + G RD +
Sbjct: 218 AGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDES 275
Query: 173 FLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD 232
L+F++ML ++P T SV+ +C A+ H +H +K G+ V + +
Sbjct: 276 LLVFRKMLEASLRPTDLTFVSVMGSC--SCAAMGH--QVHGLAIKTGYEKYTLVSNATMT 331
Query: 233 CYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
Y++ + + + EKD + +N+MIS+Y+Q A+ ++ M P + T
Sbjct: 332 MYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 293 LCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
++L L L V + +IK G + +++AL+ YSK G I++A + +++
Sbjct: 392 FGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSL 448
Query: 353 VKNNVLWTTMIMGYAQSGRGLEALELFDRLL-TERELTPDHIYFTAILTAC 402
KN + W +I G+ +G E LE F LL +E + PD + +L+ C
Sbjct: 449 RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 175/379 (46%), Gaps = 42/379 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTA-KPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N +T +++ AL L ++R T +P + + A+++ R+ G Q+H Y +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 115 RSGYEDNLFLSSALVDFYA---------KCFAIVD----------------------ARK 143
RSG + +S+ L+ Y K F +D A +
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 144 VFRAMKVHDQVS-WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK 202
VF M D V+ W ++I G +G + LF+EM ++ + F +++S C
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC--DY 202
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNET--SEKDTIVYNS 260
+L +H+ V+K GF ++ V+ +L+ Y NC+ + D+ L+ ET + +D + +N
Sbjct: 203 GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNV 262
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG 320
+I + ++L +F +M + PTD T +++ +CS A G QVH L IK G
Sbjct: 263 VIDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTG 318
Query: 321 SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFD 380
E+ V++A + MYS D A V + K+ V W TMI Y Q+ G A+ ++
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 381 RLLTERELTPDHIYFTAIL 399
R+ + PD F ++L
Sbjct: 379 RMHI-IGVKPDEFTFGSLL 396
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 177/346 (51%), Gaps = 12/346 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +++ A+ + M+ + KP + + L A + + + + A +++
Sbjct: 358 NTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIK 414
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G + +S+AL+ Y+K I A +F + +SW ++I+GF NG +
Sbjct: 415 FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLER 474
Query: 176 FKEMLGTHIK--PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
F +L + ++ P+ +TL++++S CV +L S HA+V++ G + +L++
Sbjct: 475 FSCLLESEVRILPDAYTLSTLLSICV-STSSLMLGSQTHAYVLRHGQFKETLIGNALINM 533
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMR-QKKFSPTDHT 292
Y+ C I +SL + N+ SEKD + +NS+ISAYS++ +A+ + M+ + K P T
Sbjct: 534 YSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAAT 593
Query: 293 LCTILNACSSLASLIEGRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV--LD 349
+L+ACS + EG ++ +S+V G RNV S LVD+ + G +DEA + +
Sbjct: 594 FSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKIS 653
Query: 350 QTSVKNNV-LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIY 394
+ ++ + V +W + A G L+ ++ +LL E+E +Y
Sbjct: 654 EKTIGSRVDVWWALFSACAAHG-DLKLGKMVAKLLMEKEKDDPSVY 698
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 132/278 (47%), Gaps = 37/278 (13%)
Query: 160 IAGFSANGQGRDAFLLFKEMLG-THIKPNCFTLTSVISACVGQKDAL----QHCSTL--- 211
+ G + +G+ R+A LF ++ T ++P+ ++++ I+ +D + HC +
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 212 ---HAHV----------------VKRGFRTSN----FVICSLVDCYANCKQIDDSLLLLN 248
H+HV +K+ F + + +L+ I+ + + +
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 249 ETSEKDTI-VYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI 307
+ E+D + ++N+MI+ ++ +++LF EM + TIL+ C SL
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD-YGSLD 206
Query: 308 EGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT--SVKNNVLWTTMIMG 365
G+QVHSLVIK G V +AL+ MY + +A V ++T +V++ V + +I G
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG 266
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
A R E+L +F ++L E L P + F +++ +C+
Sbjct: 267 LAGFKRD-ESLLVFRKML-EASLRPTDLTFVSVMGSCS 302
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 273 DALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASAL 331
+AL+LF ++ R P +++ + L I G QVH I+ G + V++ L
Sbjct: 39 NALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTL 98
Query: 332 VDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPD 391
+ +Y + G++ + D+ + WTT++ + G A E+FD+ + ER+ D
Sbjct: 99 LSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDK-MPERD---D 154
Query: 392 HIYFTAILTACNHAGFLE 409
+ A++T C +G+ E
Sbjct: 155 VAIWNAMITGCKESGYHE 172
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 180/359 (50%), Gaps = 37/359 (10%)
Query: 83 AKP-SKSVLCT--ALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIV 139
A+P S S+ C ALS C L Q+H +++R G++ ++F+ + ++ +Y KC I
Sbjct: 125 ARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIE 184
Query: 140 DARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG-THIKPNCFTLTSVISAC 198
ARKVF M D VSW S+I+G+S +G D ++K ML + KPN T+ SV AC
Sbjct: 185 SARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQAC 244
Query: 199 VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVY 258
GQ L +H +++ + + +++ YA C +D + L +E SEKD++ Y
Sbjct: 245 -GQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTY 303
Query: 259 NSMISAYSQNLCSGDALQLFVEMRQKKFS------------------------------- 287
++IS Y + +A+ LF EM S
Sbjct: 304 GAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSR 363
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P TL ++L + + ++L G+++H+ I+ G++ N++V ++++D Y+K G + A+ V
Sbjct: 364 PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRV 423
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
D ++ + WT +I YA G A LFD++ PD + TA+L+A H+G
Sbjct: 424 FDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQC-LGTKPDDVTLTAVLSAFAHSG 481
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 145/285 (50%), Gaps = 9/285 (3%)
Query: 107 LQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSAN 166
LQ+HA +V + + FL+S L+ FY + A VF + V + S+ +L+ +++
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 167 GQGRDAFLLFKEMLGTH------IKPNCFTLTSVISACVGQKDAL--QHCSTLHAHVVKR 218
DAF LF +G+ +P+ +++ V+ A G D +H V++
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 219 GFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF 278
GF + FV ++ Y C I+ + + +E SE+D + +NSMIS YSQ+ D +++
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 279 VEMRQ-KKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK 337
M F P T+ ++ AC + LI G +VH +I+ + ++ + +A++ Y+K
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 338 GGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
G +D AR + D+ S K++V + +I GY G EA+ LF +
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Query: 207 HCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYS 266
H LHA +V + NF+ L+ Y + +L + +E + ++ YN+++ AY+
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYT 99
Query: 267 QNLCSGDALQLFVEM------RQKKFSPTDHTLCTILNACSS-----LASLIEGRQVHSL 315
DA LF+ P ++ +L A S L SL RQVH
Sbjct: 100 SREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSL--ARQVHGF 157
Query: 316 VIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEA 375
VI+ G + +VFV + ++ Y+K +I+ AR V D+ S ++ V W +MI GY+QSG +
Sbjct: 158 VIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDC 217
Query: 376 LELFDRLLTERELTPDHIYFTAILTACNHA 405
+++ +L + P+ + ++ AC +
Sbjct: 218 KKMYKAMLACSDFKPNGVTVISVFQACGQS 247
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 168/388 (43%), Gaps = 69/388 (17%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTA-KPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I+ +S++ S + + M + KP+ + + +C ++ + GL++H ++
Sbjct: 202 NSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMI 261
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+ + +L L +A++ FYAKC ++ AR +F M D V++ ++I+G+ A+G ++A
Sbjct: 262 ENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMA 321
Query: 175 L-------------------------------FKEMLGTHIKPNCFTLTSVISACVGQKD 203
L F+EM+ +PN TL+S++ + +
Sbjct: 322 LFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSN 381
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
L+ +HA ++ G + +V S++D YA + + + + ++ I + ++I+
Sbjct: 382 -LKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIIT 440
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC-----SSLASLIEGRQVHSLVIK 318
AY+ + S A LF +M+ P D TL +L+A S +A I + I+
Sbjct: 441 AYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIE 500
Query: 319 MGSERNVFVAS----------------------------ALVDMYSKGGDIDEARFVLD- 349
G E + S AL++ S GD++ ARF D
Sbjct: 501 PGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDR 560
Query: 350 --QTSVKNNVLWTTMIMGYAQSGRGLEA 375
+ +N +T M Y Q+GR EA
Sbjct: 561 LFEMEPENTGNYTIMANLYTQAGRWEEA 588
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 39/297 (13%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +N + ++ M R ++P+ L + L S + N G +IHA+ +R
Sbjct: 335 NAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIR 394
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G ++N++++++++D YAK ++ A++VF K ++WT++I ++ +G A L
Sbjct: 395 NGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSL 454
Query: 176 FKEMLGTHIKPNCFTLTSVISACV--GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
F +M KP+ TLT+V+SA G D QH
Sbjct: 455 FDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQH-------------------------- 488
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
I DS+L + E Y M+S S+ DA++ +M P
Sbjct: 489 ------IFDSMLTKYDI-EPGVEHYACMVSVLSRAGKLSDAMEFISKM---PIDPIAKVW 538
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
+LN S L L R + +M E N + + ++Y++ G +EA V ++
Sbjct: 539 GALLNGASVLGDLEIARFACDRLFEMEPE-NTGNYTIMANLYTQAGRWEEAEMVRNK 594
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 184/350 (52%), Gaps = 9/350 (2%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
++ + + L L ++R + S L +C+ G Q+HA +++ G E
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 124 LSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
+AL+D Y+K +VD+ +VF +++ D VSW +L++GF NG+G++A +F M
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 184 IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
++ + FTL+SV+ C K LQ +HA VV G R + +++ Y++ I+++
Sbjct: 181 VEISEFTLSSVVKTCASLK-ILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEA 238
Query: 244 LLLLNETS-EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
+ + N + D ++ NS+IS +N +A L R P L + L CS
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSD 293
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTM 362
+ L G+Q+H + ++ G + + + L+DMY K G I +AR + K+ V WT+M
Sbjct: 294 NSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSM 353
Query: 363 IMGYAQSGRGLEALELFDRLLTERE-LTPDHIYFTAILTACNHAGFLEKG 411
I YA +G G++ALE+F + E + P+ + F +++AC HAG +++G
Sbjct: 354 IDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEG 403
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 91/166 (54%), Gaps = 1/166 (0%)
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
L +E ++D NS +S++ ++ D L LF+++ + + HT +L ACS L+
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 306 LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMG 365
GRQVH+L+IK G+E +AL+DMYSK G + ++ V + K+ V W ++ G
Sbjct: 100 PETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ ++G+G EAL +F + ER + ++++ C L++G
Sbjct: 160 FLRNGKGKEALGVFAAMYRER-VEISEFTLSSVVKTCASLKILQQG 204
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 189/394 (47%), Gaps = 42/394 (10%)
Query: 51 GKTFENDCITKHSKNASTDRALDLLTGMNRLTAK-PSKSVLCTALSSCAKARNWHLGLQI 109
G+ ++ I H S +AL L G+ R P L +C R LG +
Sbjct: 10 GEFHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRV-VLGKLL 68
Query: 110 HAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQG 169
H+ ++ G ++ + S+L+ Y KC +V ARKVF M + +W ++I G+ +NG
Sbjct: 69 HSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDA 128
Query: 170 RDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS 229
A LF+E+ + N T +I G++ ++ L + F N S
Sbjct: 129 VLASGLFEEI---SVCRNTVTWIEMIKG-YGKRIEIEKARELFE---RMPFELKNVKAWS 181
Query: 230 -LVDCYANCKQIDDSLLLLNETSEK-------------------------------DTIV 257
++ Y N ++++D+ + EK D ++
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI 241
Query: 258 YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI 317
+N++I+ Y+QN S DA+ F M+ + + P T+ +IL+AC+ L GR+VHSL+
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 318 KMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALE 377
G E N FV++AL+DMY+K GD++ A V + SV++ +MI A G+G EALE
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 361
Query: 378 LFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+F + +L PD I F A+LTAC H GFL +G
Sbjct: 362 MFST-MESLDLKPDEITFIAVLTACVHGGFLMEG 394
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E N F+ S ++ Y + + +AR +F + D V W +LIAG++ NG DA F
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M G +P+ T++S++SAC Q L +H+ + RG + FV +L+D YA C
Sbjct: 265 MQGEGYEPDAVTVSSILSAC-AQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCG 323
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
++++ + S + NSMIS + + +AL++F M P + T +L
Sbjct: 324 DLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLT 383
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN 356
AC L+EG ++ S + + NV L+ + + G + EA ++ + VK N
Sbjct: 384 ACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPN 441
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 169/323 (52%), Gaps = 7/323 (2%)
Query: 90 LCTALSSCAK-ARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM 148
LCT + S +K AR +H + LV ++++ LS+ALVD Y K A VF M
Sbjct: 157 LCTRMGSSSKVARMFHALV-----LVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQM 211
Query: 149 KVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHC 208
+V ++VSWT++I+G AN LF+ M +++PN TL SV+ ACV
Sbjct: 212 EVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV 271
Query: 209 STLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQN 268
+H + G + + + Y C + S +L + +D ++++SMIS Y++
Sbjct: 272 KEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAET 331
Query: 269 LCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVA 328
+ + L +MR++ TL I++AC++ L VHS ++K G ++ +
Sbjct: 332 GDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLG 391
Query: 329 SALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTEREL 388
+AL+DMY+K G + AR V + + K+ V W++MI Y G G EALE+F ++
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGH- 450
Query: 389 TPDHIYFTAILTACNHAGFLEKG 411
D + F AIL+ACNHAG +E+
Sbjct: 451 EVDDMAFLAILSACNHAGLVEEA 473
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 152/310 (49%), Gaps = 5/310 (1%)
Query: 65 NASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGL--QIHAYLVRSGYEDNL 122
N + + +DL M R +P++ L + L +C + N+ L +IH + R G +
Sbjct: 229 NQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVEL-NYGSSLVKEIHGFSFRHGCHADE 287
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
L++A + Y +C + +R +F KV D V W+S+I+G++ G + L +M
Sbjct: 288 RLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE 347
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
I+ N TL +++SAC L ST+H+ ++K GF + + +L+D YA C +
Sbjct: 348 GIEANSVTLLAIVSACT-NSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSA 406
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
+ + E +EKD + ++SMI+AY + +AL++F M + D IL+AC+
Sbjct: 407 AREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNH 466
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV-LWTT 361
+ E + + + K + + +++ + G ID+A V +K + +W++
Sbjct: 467 AGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSS 526
Query: 362 MIMGYAQSGR 371
++ GR
Sbjct: 527 LLSACETHGR 536
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 164/337 (48%), Gaps = 13/337 (3%)
Query: 77 GMNRLTAKPSKSVLCTALSSCA-KARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKC 135
G N TA +L + + +CA + + LG Q+H +++G + + +S++L+ YAK
Sbjct: 41 GTNGFTA-----ILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKF 95
Query: 136 FAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVI 195
RKVF M D VS+ S+I +G +A L KEM P + S++
Sbjct: 96 SRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLL 155
Query: 196 SACVGQKDALQHCSTLHAHV-VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKD 254
+ C + + HA V V + S + +LVD Y + + ++ K+
Sbjct: 156 ALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKN 215
Query: 255 TIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL---ASLIEGRQ 311
+ + +MIS N + LF M+++ P TL ++L AC L +SL+ ++
Sbjct: 216 EVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV--KE 273
Query: 312 VHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGR 371
+H + G + + +A + MY + G++ +R + + + V++ V+W++MI GYA++G
Sbjct: 274 IHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGD 333
Query: 372 GLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
E + L +++ E + + + AI++AC ++ L
Sbjct: 334 CSEVMNLLNQMRKEG-IEANSVTLLAIVSACTNSTLL 369
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 74/140 (52%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ +++ ++LL M + + + L +S+C + +H+ +++ G+
Sbjct: 325 ISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF 384
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
++ L +AL+D YAKC ++ AR+VF + D VSW+S+I + +G G +A +FK
Sbjct: 385 MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKG 444
Query: 179 MLGTHIKPNCFTLTSVISAC 198
M+ + + +++SAC
Sbjct: 445 MIKGGHEVDDMAFLAILSAC 464
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 178/322 (55%), Gaps = 6/322 (1%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRS-GYEDNLFLSSALVDFYAKCFAIVDARKVFRAM---K 149
L +C A++ H G++I + ++ + N L S L+ ++ C + ARK+F +
Sbjct: 138 LHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSS 197
Query: 150 VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
+ + W ++ G+S NG RDA +++ +ML + I+P F+++ + ACV KD L+
Sbjct: 198 LLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKD-LRVGR 256
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
+HA +VKR + V L+ Y DD+ + + SE++ + +NS+IS S+ +
Sbjct: 257 GIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKV 316
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
+ LF +M+++ + TL TIL ACS +A+L+ G+++H+ ++K + +V + +
Sbjct: 317 RVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLN 376
Query: 330 ALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELT 389
+L+DMY K G+++ +R V D K+ W M+ YA +G E + LF+ ++ E +
Sbjct: 377 SLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI-ESGVA 435
Query: 390 PDHIYFTAILTACNHAGFLEKG 411
PD I F A+L+ C+ G E G
Sbjct: 436 PDGITFVALLSGCSDTGLTEYG 457
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 145/307 (47%), Gaps = 9/307 (2%)
Query: 62 HSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDN 121
+S+N S AL + M +P + AL +C ++ +G IHA +V+ + +
Sbjct: 211 YSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVD 270
Query: 122 LFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+ + L+ Y + DARKVF M + V+W SLI+ S + + F LF++M
Sbjct: 271 QVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE 330
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
I + TLT+++ AC + AL +HA ++K + ++ SL+D Y C +++
Sbjct: 331 EMIGFSWATLTTILPAC-SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVE 389
Query: 242 DSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
S + + KD +N M++ Y+ N + + LF M + +P T +L+ CS
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVA----SALVDMYSKGGDIDEARFVLDQTSVKNNV 357
G SL +M +E V A + LVD+ + G I EA V++ K +
Sbjct: 450 DTGLTEYGL---SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSA 506
Query: 358 -LWTTMI 363
+W +++
Sbjct: 507 SIWGSLL 513
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ SK +L M S + L T L +C++ G +IHA +++
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
S + ++ L ++L+D Y KC + +R+VF M D SW ++ ++ NG + L
Sbjct: 366 SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINL 425
Query: 176 FKEMLGTHIKPNCFTLTSVISAC 198
F+ M+ + + P+ T +++S C
Sbjct: 426 FEWMIESGVAPDGITFVALLSGC 448
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 172/345 (49%), Gaps = 18/345 (5%)
Query: 73 DLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIH----AYLVRSGYEDNLFLSSAL 128
DL T + + + + L +C R G+++H YL+R +NL +SS L
Sbjct: 78 DLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLR----NNLGISSKL 133
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQ--VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKP 186
V YA C A +VF M D +W SLI+G++ GQ DA L+ +M +KP
Sbjct: 134 VRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKP 193
Query: 187 NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLL 246
+ FT V+ AC G ++Q +H +VK GF +V+ +LV YA C I + +
Sbjct: 194 DRFTFPRVLKAC-GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNV 252
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASL 306
+ KD + +NSM++ Y + +AL +F M Q P + ++L + + S
Sbjct: 253 FDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSF 309
Query: 307 IEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGY 366
GRQ+H VI+ G E + VA+AL+ +YSK G + +A F+ DQ ++ V W +I +
Sbjct: 310 KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAH 369
Query: 367 AQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+++ GL+ E R PD I F ++L+ C + G +E G
Sbjct: 370 SKNSNGLKYFEQMHRA----NAKPDGITFVSVLSLCANTGMVEDG 410
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 156/296 (52%), Gaps = 8/296 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +++ + A+ L M KP + L +C + +G IH LV+
Sbjct: 164 NSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVK 223
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G+ ++++ +ALV YAKC IV AR VF + D VSW S++ G+ +G +A +
Sbjct: 224 EGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDI 283
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F+ M+ I+P+ ++SV++ + + +H LH V++RG V +L+ Y+
Sbjct: 284 FRLMVQNGIEPDKVAISSVLARVL----SFKHGRQLHGWVIRRGMEWELSVANALIVLYS 339
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
Q+ + + ++ E+DT+ +N++ISA+S+N + L+ F +M + P T +
Sbjct: 340 KRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVS 396
Query: 296 ILNACSSLASLIEGRQVHSLVIK-MGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
+L+ C++ + +G ++ SL+ K G + + + +V++Y + G ++EA ++ Q
Sbjct: 397 VLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQ 452
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 190/417 (45%), Gaps = 66/417 (15%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
++KH+ A +A+ L + + + +L + L C ++ G IH +L +G+
Sbjct: 18 LSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGF 77
Query: 119 E-DNLFLSSALVDFYAKCFAIVDA-------------------------------RKVFR 146
+ N LS+ L+ Y KC +DA R VF
Sbjct: 78 KRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFD 137
Query: 147 AMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQ 206
+M D VSW +++ G++ +G +A +KE + IK N F+ +++ACV + LQ
Sbjct: 138 SMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ-LQ 196
Query: 207 HCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYS 266
H V+ GF ++ + CS++D YA C Q++ + +E + KD ++ ++IS Y+
Sbjct: 197 LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYA 256
Query: 267 QNLCSGDALQLFVEMRQKK-------------------------------FSPTDHTLCT 295
+ A +LF EM +K P T +
Sbjct: 257 KLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSS 316
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
L A +S+ASL G+++H +I+ N V S+L+DMYSK G ++ + V K+
Sbjct: 317 CLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKH 376
Query: 356 N-VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ V W TMI AQ G G +AL + D ++ R + P+ IL AC+H+G +E+G
Sbjct: 377 DCVFWNTMISALAQHGLGHKALRMLDDMIKFR-VQPNRTTLVVILNACSHSGLVEEG 432
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 163/356 (45%), Gaps = 42/356 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + ++++ + AL R K ++ L++C K+R L Q H ++
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHD----------------------- 152
+G+ N+ LS +++D YAKC + A++ F M V D
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
Query: 153 --------QVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
VSWT+LIAG+ G G A LF++M+ +KP FT +S + A +
Sbjct: 268 FCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA-S 326
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK-DTIVYNSMIS 263
L+H +H ++++ R + VI SL+D Y+ ++ S + +K D + +N+MIS
Sbjct: 327 LRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMIS 386
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEG-RQVHSLVIKMGSE 322
A +Q+ AL++ +M + + P TL ILNACS + EG R S+ ++ G
Sbjct: 387 ALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIV 446
Query: 323 RNVFVASALVDMYSKGG-------DIDEARFVLDQTSVKNNVLWTTMIMGYAQSGR 371
+ + L+D+ + G I+E F D+ + N +L I G + G+
Sbjct: 447 PDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDK-HIWNAILGVCRIHGNEELGK 501
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 197/426 (46%), Gaps = 76/426 (17%)
Query: 55 ENDCITKHSK------NASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQ 108
E D +T +S N + AL L +N L T L +CA+ G Q
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKCGKQ 208
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVS------------- 155
IHA ++ G E + ++S+LV+ YAKC + A + ++ D S
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 156 ------------------WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA 197
W S+I+G+ AN +A +LF EM + + TL +VI+A
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINA 327
Query: 198 CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA---------------------- 235
C+G L+ +H H K G V +L+D Y+
Sbjct: 328 CIGL-GFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 236 ---------NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
+C +IDD+ + K I +NSM + +SQN C+ + L+ F +M +
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 287 SPTDH-TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
PTD +L ++++AC+S++SL G QV + +G + + V+S+L+D+Y K G ++ R
Sbjct: 447 -PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGR 505
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
V D + V W +MI GYA +G+G EA++LF + ++ + P I F +LTACN+
Sbjct: 506 RVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK-MSVAGIRPTQITFMVVLTACNYC 564
Query: 406 GFLEKG 411
G +E+G
Sbjct: 565 GLVEEG 570
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 166/370 (44%), Gaps = 38/370 (10%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + N AL L M T + S++ L +++C G Q+H + +
Sbjct: 288 NSMISGYIANNMKMEALVLFNEMRNETREDSRT-LAAVINACIGLGFLETGKQMHCHACK 346
Query: 116 SGYEDNLFLSSALVDFYAKCFA-------------------------------IVDARKV 144
G D++ ++S L+D Y+KC + I DA++V
Sbjct: 347 FGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRV 406
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F ++ +SW S+ GFS NG + F +M + + +L+SVISAC +
Sbjct: 407 FERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISAC-ASISS 465
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
L+ + A G + V SL+D Y C ++ + + + D + +NSMIS
Sbjct: 466 LELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISG 525
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV-HSLVIKMGSER 323
Y+ N +A+ LF +M PT T +L AC+ + EGR++ S+ + G
Sbjct: 526 YATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVP 585
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ S +VD+ ++ G ++EA ++++ + +W++++ G +G + +++
Sbjct: 586 DKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKI 645
Query: 383 LTERELTPDH 392
+ EL P++
Sbjct: 646 I---ELEPEN 652
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 151/350 (43%), Gaps = 77/350 (22%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFL-SSALVDFYAKCFAIVDARKVFRAMKVHD 152
L SC+ L Q + L++ G+ ++ + ++ L+ Y++ + AR +F M +
Sbjct: 33 LQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRN 92
Query: 153 QVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLH 212
SW ++I G+ +G+ + F M P ++D
Sbjct: 93 YFSWNTMIEGYMNSGEKGTSLRFFDMM------P--------------ERDGYSW----- 127
Query: 213 AHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSG 272
+VV GF A ++ + L N EKD + NS++ Y N +
Sbjct: 128 -NVVVSGF--------------AKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAE 172
Query: 273 DALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALV 332
+AL+LF E+ FS TL T+L AC+ L +L G+Q+H+ ++ G E + + S+LV
Sbjct: 173 EALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLV 229
Query: 333 DMYSKGGD-------------------------------IDEARFVLDQTSVKNNVLWTT 361
++Y+K GD ++E+R + D+ S + +LW +
Sbjct: 230 NVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNS 289
Query: 362 MIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
MI GY + +EAL LF+ + E D A++ AC GFLE G
Sbjct: 290 MISGYIANNMKMEALVLFNEM--RNETREDSRTLAAVINACIGLGFLETG 337
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERN-VFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+L +CSS RQ + L++K G + V VA+ L+ MYS+ G + AR + D+ +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERE 387
N W TMI GY SG +L FD ++ ER+
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFD-MMPERD 123
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 165/348 (47%), Gaps = 3/348 (0%)
Query: 65 NASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFL 124
N + A+ LL M L + V + C R G ++++ + S + L
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 125 SSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH- 183
+A + + + +VDA VF M + SW L+ G++ G +A L+ ML
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 184 IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
+KP+ +T V+ C G D L +H HVV+ G+ V+ +L+ Y C + +
Sbjct: 192 VKPDVYTFPCVLRTCGGIPD-LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL 303
LL + +D I +N+MIS Y +N + L+LF MR P TL ++++AC L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 304 ASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMI 363
GR +H+ VI G ++ V ++L MY G EA + + K+ V WTTMI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 364 MGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
GY + +A++ + R++ + + PD I A+L+AC G L+ G
Sbjct: 371 SGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 157/322 (48%), Gaps = 2/322 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTA-KPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N + ++K D A+ L M + KP L +C + G ++H ++V
Sbjct: 164 NVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVV 223
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
R GYE ++ + +AL+ Y KC + AR +F M D +SW ++I+G+ NG +
Sbjct: 224 RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLE 283
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
LF M G + P+ TLTSVISAC D + +HA+V+ GF V SL Y
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISACELLGDR-RLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
N ++ L + KD + + +MIS Y N A+ + M Q P + T+
Sbjct: 343 LNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVA 402
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+L+AC++L L G ++H L IK V VA+ L++MYSK ID+A + K
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 355 NNVLWTTMIMGYAQSGRGLEAL 376
N + WT++I G + R EAL
Sbjct: 463 NVISWTSIIAGLRLNNRCFEAL 484
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 184/356 (51%), Gaps = 4/356 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + +N L+L M L+ P L + +S+C + LG IHAY++
Sbjct: 266 NAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVIT 325
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G+ ++ + ++L Y + +A K+F M+ D VSWT++I+G+ N A
Sbjct: 326 TGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDT 385
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
++ M +KP+ T+ +V+SAC D L LH +K + V +L++ Y+
Sbjct: 386 YRMMDQDSVKPDEITVAAVLSACATLGD-LDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
CK ID +L + + K+ I + S+I+ N +AL +F+ + P TL
Sbjct: 445 KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTA 503
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
L AC+ + +L+ G+++H+ V++ G + F+ +AL+DMY + G ++ A + K+
Sbjct: 504 ALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KD 562
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W ++ GY++ G+G +ELFDR++ R + PD I F ++L C+ + + +G
Sbjct: 563 VTSWNILLTGYSERGQGSMVVELFDRMVKSR-VRPDEITFISLLCGCSKSQMVRQG 617
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 151/306 (49%), Gaps = 4/306 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ + N D+A+D M++ + KP + + LS+CA + G+++H +++
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ +++ L++ Y+KC I A +F + + +SWTS+IAG N + +A + ++
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M T ++PN + A + AL +HAHV++ G +F+ +L+D Y C
Sbjct: 490 MKMT-LQPN-AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 547
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+++ + N + +KD +N +++ YS+ ++LF M + + P + T ++L
Sbjct: 548 RMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLC 606
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNNV 357
CS + +G S + G N+ + +VD+ + G++ EA +F+ +
Sbjct: 607 GCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA 666
Query: 358 LWTTMI 363
+W ++
Sbjct: 667 VWGALL 672
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 177/322 (54%), Gaps = 10/322 (3%)
Query: 92 TALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH 151
+ +++C + L QIH ++ GYE L + + L+ Y+KC + + VF M
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340
Query: 152 DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTL 211
+ VSWT++I S+N DA +F M + PN T +I+A V + ++ +
Sbjct: 341 NVVSWTTMI---SSNKD--DAVSIFLNMRFDGVYPNEVTFVGLINA-VKCNEQIKEGLKI 394
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCS 271
H +K GF + V S + YA + ++D+ + + ++ I +N+MIS ++QN S
Sbjct: 395 HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFS 454
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLA--SLIEGRQVHSLVIKMGSERNVFVAS 329
+AL++F+ + P ++T ++LNA + S+ +G++ H+ ++K+G V+S
Sbjct: 455 HEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSS 513
Query: 330 ALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELT 389
AL+DMY+K G+IDE+ V ++ S KN +WT++I Y+ G + LF +++ E +
Sbjct: 514 ALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKEN-VA 572
Query: 390 PDHIYFTAILTACNHAGFLEKG 411
PD + F ++LTACN G ++KG
Sbjct: 573 PDLVTFLSVLTACNRKGMVDKG 594
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 166/311 (53%), Gaps = 9/311 (2%)
Query: 92 TALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH 151
TALS C + + LGLQ+ + +V++G E +L + ++ + Y++ + AR+VF M
Sbjct: 179 TALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK 238
Query: 152 DQVSWTSLIAGFSANGQ-GRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCST 210
D +SW SL++G S G G +A ++F++M+ ++ + + TSVI+ C + D L+
Sbjct: 239 DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETD-LKLARQ 297
Query: 211 LHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLC 270
+H +KRG+ + V L+ Y+ C ++ + ++ SE++ + + +MIS+
Sbjct: 298 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD--- 354
Query: 271 SGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASA 330
DA+ +F+ MR P + T ++NA + EG ++H L IK G V ++
Sbjct: 355 --DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNS 412
Query: 331 LVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTP 390
+ +Y+K +++A+ + + + + W MI G+AQ+G EAL++F L E P
Sbjct: 413 FITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMP 470
Query: 391 DHIYFTAILTA 401
+ F ++L A
Sbjct: 471 NEYTFGSVLNA 481
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 149/289 (51%), Gaps = 3/289 (1%)
Query: 65 NASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFL 124
+++ D A+ + M P++ +++ GL+IH +++G+ +
Sbjct: 350 SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 125 SSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
++ + YAK A+ DA+K F + + +SW ++I+GF+ NG +A +F
Sbjct: 410 GNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAET 468
Query: 185 KPNCFTLTSVISACVGQKD-ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
PN +T SV++A +D +++ HAH++K G + V +L+D YA ID+S
Sbjct: 469 MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES 528
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL 303
+ NE S+K+ V+ S+ISAYS + + LF +M ++ +P T ++L AC+
Sbjct: 529 EKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 304 ASLIEGRQVHSLVIKMGS-ERNVFVASALVDMYSKGGDIDEARFVLDQT 351
+ +G ++ +++I++ + E + S +VDM + G + EA ++ +
Sbjct: 589 GMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 180/398 (45%), Gaps = 33/398 (8%)
Query: 25 LRHLHAFPVSDAKNFLCRQFFI------KKFSGK------TFENDCITKHSKNASTDRAL 72
L +LH + +K+FL ++F+ K F G T N I++ + S RAL
Sbjct: 4 LNYLHC---NRSKSFLFQRFYSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARAL 60
Query: 73 DLLT---GMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
+ + + LC AL +C + G QIH + SG+ + +S+A++
Sbjct: 61 SIFKENLQLGYFGRHMDEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVM 118
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
Y K +A +F + D VSW ++++GF N + A M + + F
Sbjct: 119 GMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAF 175
Query: 190 TLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
T ++ +S CVG + L L + VVK G + V S + Y+ + + +E
Sbjct: 176 TYSTALSFCVGSEGFLLGLQ-LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE 234
Query: 250 TSEKDTIVYNSMISAYSQNLCSG-DALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
S KD I +NS++S SQ G +A+ +F +M ++ + +++ C L
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 309 GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQ 368
RQ+H L IK G E + V + L+ YSK G ++ + V Q S +N V WTTMI
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI----- 349
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAILTA--CNH 404
S +A+ +F + + + P+ + F ++ A CN
Sbjct: 350 SSNKDDAVSIFLNMRFDG-VYPNEVTFVGLINAVKCNE 386
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 47 KKFSGKTFE-----NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKAR 101
K F TF N I+ ++N + AL + T P++ + L++ A A
Sbjct: 428 KAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAE 486
Query: 102 NWHL--GLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSL 159
+ + G + HA+L++ G +SSAL+D YAK I ++ KVF M +Q WTS+
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSI 546
Query: 160 IAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC 198
I+ +S++G LF +M+ ++ P+ T SV++AC
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTAC 585
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 169/328 (51%), Gaps = 11/328 (3%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P T SC+ + + GLQ+H+ + R G+ ++++S+ +VD YAK + AR
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNA 135
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F M +VSWT+LI+G+ G+ A LF +M H+K + +++ V D
Sbjct: 136 FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM--PHVK-DVVIYNAMMDGFVKSGD- 191
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
+ L + + T +++ Y N K ID + L + E++ + +N+MI
Sbjct: 192 MTSARRLFDEMTHKTVITWT----TMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGG 247
Query: 265 YSQNLCSGDALQLFVEMR-QKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
Y QN + ++LF EM+ P D T+ ++L A S +L G H V + ++
Sbjct: 248 YCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDK 307
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
V V +A++DMYSK G+I++A+ + D+ K W MI GYA +G AL+LF ++
Sbjct: 308 KVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM 367
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
E + PD I A++TACNH G +E+G
Sbjct: 368 IEEK--PDEITMLAVITACNHGGLVEEG 393
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 114/232 (49%), Gaps = 3/232 (1%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT-HI 184
+ ++ Y I ARK+F AM + VSW ++I G+ N Q ++ LF+EM T +
Sbjct: 211 TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSL 270
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
P+ T+ SV+ A + AL H V ++ V +++D Y+ C +I+ +
Sbjct: 271 DPDDVTILSVLPA-ISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 245 LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
+ +E EK +N+MI Y+ N + AL LFV M ++ P + T+ ++ AC+
Sbjct: 330 RIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGG 388
Query: 305 SLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN 356
+ EGR+ ++ +MG + +VD+ + G + EA ++ + N
Sbjct: 389 LVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPN 440
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 254 DTIVYNSMISAYSQNLCSGDALQLFVEMRQKK-FSPTDHTLCTILNACSSLASLIEGRQV 312
D+ + NSMI AY + D+ L+ ++R++ F+P + T T+ +CS + +G Q+
Sbjct: 41 DSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQL 100
Query: 313 HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRG 372
HS + + G +++V++ +VDMY+K G + AR D+ ++ V WT +I GY + G
Sbjct: 101 HSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGE- 159
Query: 373 LEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
L+L +L + D + + A++ GF++ G
Sbjct: 160 ---LDLASKLFDQMPHVKDVVIYNAMMD-----GFVKSG 190
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 188/365 (51%), Gaps = 4/365 (1%)
Query: 48 KFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGL 107
+F N I N LDL + + L +C +A + LG+
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
+H+ +V+ G+ ++ ++L+ Y+ + DA K+F + V+WT+L +G++ +G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
+ R+A LFK+M+ +KP+ + + V+SACV D L + ++ + + ++FV
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD-LDSGEWIVKYMEEMEMQKNSFVR 250
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
+LV+ YA C +++ + + + EKD + +++MI Y+ N + ++LF++M Q+
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P ++ L++C+SL +L G SL+ + N+F+A+AL+DMY+K G + V
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEV 370
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTER-ELTPDHIYFTAILTACNHAG 406
+ K+ V+ I G A++G + +F + TE+ ++PD F +L C HAG
Sbjct: 371 FKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ--TEKLGISPDGSTFLGLLCGCVHAG 428
Query: 407 FLEKG 411
++ G
Sbjct: 429 LIQDG 433
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 146/300 (48%), Gaps = 7/300 (2%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
A+DL M + KP + LS+C + G I Y+ + N F+ + LV
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
+ YAKC + AR VF +M D V+W+++I G+++N ++ LF +ML ++KP+ F
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQF 314
Query: 190 TLTSVISAC--VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLL 247
++ +S+C +G D + +L + + F T+ F+ +L+D YA C + +
Sbjct: 315 SIVGFLSSCASLGALDLGEWGISL---IDRHEFLTNLFMANALIDMYAKCGAMARGFEVF 371
Query: 248 NETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI 307
E EKD ++ N+ IS ++N + +F + + SP T +L C +
Sbjct: 372 KEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQ 431
Query: 308 EG-RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNNVLWTTMIMG 365
+G R +++ +R V +VD++ + G +D+A R + D N ++W ++ G
Sbjct: 432 DGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL 245
P+ + I + + H +H ++ F++ L+ +Q S L
Sbjct: 7 PSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYL 66
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
L + T + +YNS+I+ + N + L LF+ +R+ T +L AC+ +S
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 306 LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMG 365
G +HSLV+K G +V ++L+ +YS G +++A + D+ ++ V WT + G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
Y SGR EA++LF +++ E + PD + +L+AC H G L+ G
Sbjct: 187 YTTSGRHREAIDLFKKMV-EMGVKPDSYFIVQVLSACVHVGDLDSG 231
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 126/299 (42%), Gaps = 41/299 (13%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I ++ N+ ++L M + KP + + LSSCA LG + + R +
Sbjct: 285 IQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF 344
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
NLF+++AL+D YAKC A+ +VF+ MK D V + I+G + NG + +F +F +
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
I P+ T ++ CV HA +++ G R N + C YA
Sbjct: 405 TEKLGISPDGSTFLGLLCGCV------------HAGLIQDGLRFFNAISC----VYA--- 445
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
L T E Y M+ + + DA +L +M + P +L+
Sbjct: 446 --------LKRTVEH----YGCMVDLWGRAGMLDDAYRLICDMPMR---PNAIVWGALLS 490
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALV---DMYSKGGDIDEARFVLDQTSVK 354
C L++ Q+ V+K + A V ++YS GG DEA V D + K
Sbjct: 491 GC----RLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKK 545
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 179/323 (55%), Gaps = 3/323 (0%)
Query: 90 LCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK 149
L A+ +C G+ IH +++G + + +++ +LV+ YA+ + A+KVF +
Sbjct: 112 LVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIP 171
Query: 150 VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
V + V W L+ G+ + + F LF M T + + TL ++ AC G A +
Sbjct: 172 VRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKAC-GNVFAGKVGK 230
Query: 210 TLHAHVVKRGF-RTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQN 268
+H ++R F S+++ S++D Y C+ +D++ L + +++ +++ ++IS +++
Sbjct: 231 CVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKC 290
Query: 269 LCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVA 328
+ +A LF +M ++ P TL IL +CSSL SL G+ VH +I+ G E +
Sbjct: 291 ERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNF 350
Query: 329 SALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTEREL 388
++ +DMY++ G+I AR V D +N + W++MI + +G EAL+ F ++ ++ +
Sbjct: 351 TSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQ-NV 409
Query: 389 TPDHIYFTAILTACNHAGFLEKG 411
P+ + F ++L+AC+H+G +++G
Sbjct: 410 VPNSVTFVSLLSACSHSGNVKEG 432
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 153/298 (51%), Gaps = 10/298 (3%)
Query: 61 KHSKNASTDRALDLL--TGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
K+SK+ R L+ TG+ A + +++C + +C +G +H +R +
Sbjct: 187 KYSKDPEVFRLFCLMRDTGL----ALDALTLICL-VKACGNVFAGKVGKCVHGVSIRRSF 241
Query: 119 EDNL-FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
D +L ++++D Y KC + +ARK+F + V WT+LI+GF+ + +AF LF+
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
+ML I PN TL +++ +C +L+H ++H ++++ G S +D YA C
Sbjct: 302 QMLRESILPNQCTLAAILVSC-SSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARC 360
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
I + + + E++ I ++SMI+A+ N +AL F +M+ + P T ++L
Sbjct: 361 GNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLL 420
Query: 298 NACSSLASLIEG-RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+ACS ++ EG +Q S+ G + +VD+ + G+I EA+ +D VK
Sbjct: 421 SACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVK 478
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 159/309 (51%), Gaps = 7/309 (2%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKV--HDQVSWTSLIAGFSA 165
Q+HA ++ G+ED + L S+L + Y + + A F + ++ SW ++++G+S
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK 84
Query: 166 NGQ--GRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTS 223
+ D LL+ M + F L I ACVG L++ +H +K G
Sbjct: 85 SKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGL-GLLENGILIHGLAMKNGLDKD 143
Query: 224 NFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQ 283
++V SLV+ YA ++ + + +E ++++++ ++ Y + + +LF MR
Sbjct: 144 DYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRD 203
Query: 284 KKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG-SERNVFVASALVDMYSKGGDID 342
+ TL ++ AC ++ + G+ VH + I+ +++ ++ ++++DMY K +D
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLD 263
Query: 343 EARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
AR + + + +N V+WTT+I G+A+ R +EA +LF ++L E + P+ AIL +C
Sbjct: 264 NARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE-SILPNQCTLAAILVSC 322
Query: 403 NHAGFLEKG 411
+ G L G
Sbjct: 323 SSLGSLRHG 331
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS--EKDTIVY 258
Q L H +HA V+ GF + SL + Y ++D + N +++ +
Sbjct: 16 QAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSW 75
Query: 259 NSMISAYSQN--LCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLV 316
N+++S YS++ C D L L+ MR+ L + AC L L G +H L
Sbjct: 76 NTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLA 135
Query: 317 IKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEAL 376
+K G +++ +VA +LV+MY++ G ++ A+ V D+ V+N+VLW ++ GY + + E
Sbjct: 136 MKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVF 195
Query: 377 ELFDRLLTERELTPDHIYFTAILTACNH 404
LF L+ + L D + ++ AC +
Sbjct: 196 RLFC-LMRDTGLALDALTLICLVKACGN 222
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 174/356 (48%), Gaps = 40/356 (11%)
Query: 87 KSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFR 146
+ L + L SC +N IHA ++R+ ++ + F+ L+ + ++ A VF
Sbjct: 29 RKTLISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS 85
Query: 147 AMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQ 206
+ + +T++I GF ++G+ D L+ M+ + P+ + +TSV+ AC L+
Sbjct: 86 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC-----DLK 140
Query: 207 HCSTLHAHVVKRGFRTSNFV-------------------------------ICSLVDCYA 235
C +HA V+K GF +S V +++CY+
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C I ++L L + KDT+ + +MI +N AL+LF EM+ + S + T
Sbjct: 201 ECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+L+ACS L +L GR VHS V E + FV +AL++MYS+ GDI+EAR V K+
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ + TMI G A G +EA+ F R + R P+ + A+L AC+H G L+ G
Sbjct: 321 VISYNTMISGLAMHGASVEAINEF-RDMVNRGFRPNQVTLVALLNACSHGGLLDIG 375
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 37/288 (12%)
Query: 125 SSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
++ +++ Y++C I +A ++F+ +K+ D V WT++I G N + A LF+EM ++
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
N FT V+SAC AL+ +H+ V + SNFV +L++ Y+ C I+++
Sbjct: 252 SANEFTAVCVLSAC-SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 245 LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
+ +KD I YN+MIS + + S +A+ F +M + F P TL +LNACS
Sbjct: 311 RVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGG 370
Query: 305 SLIEGRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMI 363
L G +V +S+ E + +VD+ + G ++EA
Sbjct: 371 LLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAY------------------ 412
Query: 364 MGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
R + + PDHI +L+AC G +E G
Sbjct: 413 -----------------RFIENIPIEPDHIMLGTLLSACKIHGNMELG 443
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 76/135 (56%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
+N ++AL+L M ++ LS+C+ LG +H+++ E + F
Sbjct: 232 RNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF 291
Query: 124 LSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
+ +AL++ Y++C I +AR+VFR M+ D +S+ ++I+G + +G +A F++M+
Sbjct: 292 VGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 351
Query: 184 IKPNCFTLTSVISAC 198
+PN TL ++++AC
Sbjct: 352 FRPNQVTLVALLNAC 366
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 186/375 (49%), Gaps = 51/375 (13%)
Query: 76 TGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKC 135
+GMN +T + + L C G+Q+H ++SG+E +++ ++LV Y++C
Sbjct: 128 SGMNSVT-------VASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRC 177
Query: 136 FAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG-THIKPNCFTLTSV 194
V A ++F + V++ + I+G NG +F M + +PN T +
Sbjct: 178 GEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNA 237
Query: 195 ISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK----------QIDD-- 242
I+AC + LQ+ LH V+K+ F+ V +L+D Y+ C+ ++ D
Sbjct: 238 ITACASLLN-LQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTR 296
Query: 243 ---------SLLLLN---------------ETSEKDTIVYNSMISAYSQNLCSGDALQLF 278
S +++N E + D+ +NS+IS +SQ +A + F
Sbjct: 297 NLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFF 356
Query: 279 VEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKG 338
M P+ L ++L+ACS + +L G+++H VIK +ER++FV ++L+DMY K
Sbjct: 357 ERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKC 416
Query: 339 GDIDEARFVLD--QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFT 396
G AR + D + K+ V W MI GY + G A+E+F+ LL E ++ P FT
Sbjct: 417 GLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFE-LLREEKVEPSLATFT 475
Query: 397 AILTACNHAGFLEKG 411
A+L+AC+H G +EKG
Sbjct: 476 AVLSACSHCGNVEKG 490
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 167/345 (48%), Gaps = 15/345 (4%)
Query: 70 RALDLLTGMNRL----TAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLS 125
R +L+TG L + P+K L SCAK + G +HA +V++G+ ++F +
Sbjct: 10 RVSNLVTGGTSLDVILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTA 69
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
+ALV Y K + DA KV M S + ++G NG RDAF +F + +
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG 129
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL 245
N T+ SV+ C + +Q LH +K GF +V SLV Y+ C + +
Sbjct: 130 MNSVTVASVLGGCGDIEGGMQ----LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAAR 185
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS---PTDHTLCTILNACSS 302
+ + K + YN+ IS +N +F MR KFS P D T + AC+S
Sbjct: 186 MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMR--KFSSEEPNDVTFVNAITACAS 243
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ-TSVKNNVLWTT 361
L +L GRQ+H LV+K + V +AL+DMYSK A V + +N + W +
Sbjct: 244 LLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNS 303
Query: 362 MIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
+I G +G+ A+ELF++L +E L PD + ++++ + G
Sbjct: 304 VISGMMINGQHETAVELFEKLDSEG-LKPDSATWNSLISGFSQLG 347
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 48/312 (15%)
Query: 82 TAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDA 141
+ +P+ A+++CA N G Q+H +++ ++ + +AL+D Y+KC A
Sbjct: 226 SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSA 285
Query: 142 RKVFRAMK------------------------------------VHDQVSWTSLIAGFSA 165
VF +K D +W SLI+GFS
Sbjct: 286 YIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQ 345
Query: 166 NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNF 225
G+ +AF F+ ML + P+ LTS++SAC L++ +H HV+K F
Sbjct: 346 LGKVIEAFKFFERMLSVVMVPSLKCLTSLLSAC-SDIWTLKNGKEIHGHVIKAAAERDIF 404
Query: 226 VICSLVDCYANC------KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFV 279
V+ SL+D Y C ++I D E KD + +N MIS Y ++ A+++F
Sbjct: 405 VLTSLIDMYMKCGLSSWARRIFDRF----EPKPKDPVFWNVMISGYGKHGECESAIEIFE 460
Query: 280 EMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI-KMGSERNVFVASALVDMYSKG 338
+R++K P+ T +L+ACS ++ +G Q+ L+ + G + + ++D+ +
Sbjct: 461 LLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRS 520
Query: 339 GDIDEARFVLDQ 350
G + EA+ V+DQ
Sbjct: 521 GRLREAKEVIDQ 532
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ S+ A M + PS L + LS+C+ G +IH ++++
Sbjct: 337 NSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIK 396
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM--KVHDQVSWTSLIAGFSANGQGRDAF 173
+ E ++F+ ++L+D Y KC AR++F K D V W +I+G+ +G+ A
Sbjct: 397 AAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAI 456
Query: 174 LLFKEMLGTHIKPNCFTLTSVISAC 198
+F+ + ++P+ T T+V+SAC
Sbjct: 457 EIFELLREEKVEPSLATFTAVLSAC 481
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 189/388 (48%), Gaps = 35/388 (9%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + ++ + D A+ + M L +P + + + +C+++ +G IHA V+
Sbjct: 232 NVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVK 291
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ +S+++ D Y KC + AR+VF + D SWTS ++G++ +G R+A L
Sbjct: 292 LSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAREL 351
Query: 176 F-----------KEMLGTHIKPNCF--------------------TLTSVISACVGQKDA 204
F MLG ++ + + TL +++ C G D
Sbjct: 352 FDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISD- 410
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSE-KDTIVYNSMIS 263
+Q H + + G+ T+ V +L+D Y C + + + + SE +D + +N++++
Sbjct: 411 VQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLT 470
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
++ S AL F M Q + P+ +TL T+L C+++ +L G+ +H +I+ G +
Sbjct: 471 GVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKI 529
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
+V + A+VDMYSK D A V + + ++ +LW ++I G ++GR E ELF LL
Sbjct: 530 DVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELF-MLL 588
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
+ PDH+ F IL AC G +E G
Sbjct: 589 ENEGVKPDHVTFLGILQACIREGHVELG 616
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 181/388 (46%), Gaps = 35/388 (9%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N IT ++N +D + MNR + +++ L SC + L Q+H +V+
Sbjct: 131 NAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVK 190
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
GY N+ L +++VD Y KC + DAR+VF + VSW ++ + G +A ++
Sbjct: 191 YGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVM 250
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F +ML +++P T++SV+ AC + AL+ +HA VK V S+ D Y
Sbjct: 251 FFKMLELNVRPLNHTVSSVMLAC-SRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYV 309
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF----------------- 278
C +++ + + ++T KD + S +S Y+ + + +A +LF
Sbjct: 310 KCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGG 369
Query: 279 --------------VEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
MRQ+ + + TL ILN CS ++ + G+Q H + + G + N
Sbjct: 370 YVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN 429
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTS-VKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
V VA+AL+DMY K G + A Q S +++ V W ++ G A+ GR +AL F+ +
Sbjct: 430 VIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM- 488
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
+ E P +L C + L G
Sbjct: 489 -QVEAKPSKYTLATLLAGCANIPALNLG 515
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 155/298 (52%), Gaps = 6/298 (2%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
++ ++LV +FL + ++ Y KC + DAR++F M D SW ++I + NG
Sbjct: 82 KVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNG 141
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
+ F +F+ M ++ + V+ +C G L+ LH VVK G+ + +
Sbjct: 142 VSDEVFRMFRRMNRDGVRATETSFAGVLKSC-GLILDLRLLRQLHCAVVKYGYSGNVDLE 200
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
S+VD Y C+ + D+ + +E + +N ++ Y + + +A+ +F +M +
Sbjct: 201 TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVR 260
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P +HT+ +++ ACS +L G+ +H++ +K+ + V++++ DMY K ++ AR V
Sbjct: 261 PLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRV 320
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
DQT K+ WT+ + GYA SG EA ELFD L+ ER + + + A+L HA
Sbjct: 321 FDQTRSKDLKSWTSAMSGYAMSGLTREARELFD-LMPERNI----VSWNAMLGGYVHA 373
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 7/309 (2%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ-VSWTSLIAGFSAN 166
++H + G++ + ++ S LV Y+K ++ DA+KVF + D V W +L+ G+S
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 167 GQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFV 226
+ DA L+F +M + + T+TSV+SA D + + ++H VK G + V
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGD-IDNGRSIHGLAVKTGSGSDIVV 299
Query: 227 ICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
+L+D Y K ++++ + E+D +NS++ + L LF M
Sbjct: 300 SNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGI 359
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG----SERNVFVASALVDMYSKGGDID 342
P TL T+L C LASL +GR++H +I G N F+ ++L+DMY K GD+
Sbjct: 360 RPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLR 419
Query: 343 EARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
+AR V D VK++ W MI GY G AL++F + + PD I F +L AC
Sbjct: 420 DARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFS-CMCRAGVKPDEITFVGLLQAC 478
Query: 403 NHAGFLEKG 411
+H+GFL +G
Sbjct: 479 SHSGFLNEG 487
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 170/324 (52%), Gaps = 7/324 (2%)
Query: 91 CTA-LSSCAKARNWHLGLQIHAYLVRSGY-EDNLFLSSALVDFYAKCFAIVDARKVFRAM 148
C A L CA+ +++ G QIH ++VR G+ +D+ ++LV+ YAKC + A VF
Sbjct: 63 CIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS 122
Query: 149 KVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHC 208
+ D + +LI+GF NG DA ++EM I P+ +T S++ + L
Sbjct: 123 E-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME--LSDV 179
Query: 209 STLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKD-TIVYNSMISAYSQ 267
+H K GF + +V LV Y+ ++D+ + +E ++D ++++N++++ YSQ
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQ 239
Query: 268 NLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
DAL +F +MR++ + HT+ ++L+A + + GR +H L +K GS ++ V
Sbjct: 240 IFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVV 299
Query: 328 ASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERE 387
++AL+DMY K ++EA + + ++ W +++ + G L LF+R+L
Sbjct: 300 SNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS-G 358
Query: 388 LTPDHIYFTAILTACNHAGFLEKG 411
+ PD + T +L C L +G
Sbjct: 359 IRPDIVTLTTVLPTCGRLASLRQG 382
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 162/346 (46%), Gaps = 16/346 (4%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + +S+ + AL + + M S+ + + LS+ + + G IH V+
Sbjct: 231 NALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVK 290
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G ++ +S+AL+D Y K + +A +F AM D +W S++ G L
Sbjct: 291 TGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLAL 350
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF---RTSN-FVICSLV 231
F+ ML + I+P+ TLT+V+ C G+ +L+ +H +++ G ++SN F+ SL+
Sbjct: 351 FERMLCSGIRPDIVTLTTVLPTC-GRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLM 409
Query: 232 DCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
D Y C + D+ ++ + KD+ +N MI+ Y C AL +F M + P +
Sbjct: 410 DMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEI 469
Query: 292 TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS----ALVDMYSKGGDIDEA-RF 346
T +L ACS L EGR + + +M + N+ S ++DM + ++EA
Sbjct: 470 TFVGLLQACSHSGFLNEGR---NFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYEL 526
Query: 347 VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDH 392
+ + N V+W +++ G AL RL EL P+H
Sbjct: 527 AISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRL---HELEPEH 569
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 177/349 (50%), Gaps = 33/349 (9%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
L + +K G+++H + + F+ + +D YA C I AR VF M D
Sbjct: 118 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 177
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
V+W ++I + G +AF LF+EM +++ P+ L +++SAC G+ +++ ++
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC-GRTGNMRYNRAIYE 236
Query: 214 HVVKRGFRTSN-------------------------------FVICSLVDCYANCKQIDD 242
+++ R FV ++V Y+ C ++DD
Sbjct: 237 FLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
+ ++ ++T +KD + + +MISAY ++ +AL++F EM P ++ ++++AC++
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTM 362
L L + + VHS + G E + + +AL++MY+K G +D R V ++ +N V W++M
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 363 IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
I + G +AL LF R+ E + P+ + F +L C+H+G +E+G
Sbjct: 417 INALSMHGEASDALSLFARMKQEN-VEPNEVTFVGVLYGCSHSGLVEEG 464
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 172/375 (45%), Gaps = 47/375 (12%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++ + D A L M P + +LC +S+C + N I+ +L+
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 116 -------------------SGYED------------NLFLSSALVDFYAKCFAIVDARKV 144
+G D NLF+S+A+V Y+KC + DA+ +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
F + D V WT++I+ + + ++A +F+EM + IKP+ ++ SVISAC
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISAC-ANLGI 359
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
L +H+ + G + + +L++ YA C +D + + + ++ + ++SMI+A
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA 419
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
S + + DAL LF M+Q+ P + T +L CS + EG+++ + M E N
Sbjct: 420 LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA---SMTDEYN 476
Query: 325 VFVA----SALVDMYSKGGDIDEARFVLDQTSVKNN-VLWTTMIMGYAQSGRGLEALELF 379
+ +VD++ + + EA V++ V +N V+W +++ G LEL
Sbjct: 477 ITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE----LEL- 531
Query: 380 DRLLTER--ELTPDH 392
+ +R EL PDH
Sbjct: 532 GKFAAKRILELEPDH 546
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 124/250 (49%), Gaps = 6/250 (2%)
Query: 152 DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTL 211
+ + + + S + + R L ++ + + + F+ ++ A V + AL L
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKA-VSKVSALFEGMEL 133
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCS 271
H K FV +D YA+C +I+ + + +E S +D + +N+MI Y +
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASAL 331
+A +LF EM+ P + LC I++AC ++ R ++ +I+ + + +AL
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 332 VDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPD 391
V MY+ G +D AR + SV+N + T M+ GY++ GR +A +FD+ TE++ D
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ--TEKK---D 308
Query: 392 HIYFTAILTA 401
+ +T +++A
Sbjct: 309 LVCWTTMISA 318
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 8/207 (3%)
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE----TSEKDTIVYN 259
+L H LHAH+++ N + S + + + LN S ++IV+N
Sbjct: 24 SLNHIKQLHAHILR---TVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFN 80
Query: 260 SMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM 319
+ S++ + + +R + IL A S +++L EG ++H + K+
Sbjct: 81 PFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKI 140
Query: 320 GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELF 379
+ + FV + +DMY+ G I+ AR V D+ S ++ V W TMI Y + G EA +LF
Sbjct: 141 ATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLF 200
Query: 380 DRLLTERELTPDHIYFTAILTACNHAG 406
+ + + + PD + I++AC G
Sbjct: 201 EE-MKDSNVMPDEMILCNIVSACGRTG 226
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 180/397 (45%), Gaps = 72/397 (18%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P VL CA+ + +G QIH SG + + F+ ++ Y +C + DARKV
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 145 FRAMKVHDQV-----------------------------------SWTSLIAGFSANGQG 169
F M D V SW +++GF+ +G
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 170 RDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS 229
++A ++F+++ P+ T++SV+ + VG + L +H +V+K+G VI +
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPS-VGDSEMLNMGRLIHGYVIKQGLLKDKCVISA 292
Query: 230 LVDCYANCKQIDDSLLLLNE-----------------------------------TSEKD 254
++D Y + + L N+ T E +
Sbjct: 293 MIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 255 TIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHS 314
+ + S+I+ +QN +AL+LF EM+ P T+ ++L AC ++A+L GR H
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 315 LVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLE 374
+++ NV V SAL+DMY+K G I+ ++ V + KN V W +++ G++ G+ E
Sbjct: 413 FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKE 472
Query: 375 ALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ +F+ L+ R L PD I FT++L+AC G ++G
Sbjct: 473 VMSIFESLMRTR-LKPDFISFTSLLSACGQVGLTDEG 508
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 158/345 (45%), Gaps = 38/345 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N ++ +++ A+ + ++ L P + + + L S + ++G IH Y+++
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 116 SGYEDNLFLSSALVDFYAK---CFAIVDARKVFRAMKVH--------------------- 151
G + + SA++D Y K + I+ F M+
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 152 -----------DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVG 200
+ VSWTS+IAG + NG+ +A LF+EM +KPN T+ S++ AC G
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPAC-G 399
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNS 260
AL H + H V+ + V +L+D YA C +I+ S ++ N K+ + +NS
Sbjct: 400 NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS 459
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI-KM 319
+++ +S + + + + +F + + + P + ++L+AC + EG + ++ +
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 519
Query: 320 GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMI 363
G + + S +V++ + G + EA ++ + + ++ +W ++
Sbjct: 520 GIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 154/374 (41%), Gaps = 72/374 (19%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
Q HA +++SG +++ ++S+ L+ Y+ DA V +++ S++SLI +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
+ +F M + P+ L ++ C + A + +H G FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC-AELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMR----- 282
S+ Y C ++ D+ + + S+KD + ++++ AY++ C + +++ EM
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 283 --------------------------QK----KFSPTDHTLCTILNACSSLASLIEGRQV 312
QK F P T+ ++L + L GR +
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 313 HSLVIKMGSERNVFVASALVDMYSKGGD-------------------------------I 341
H VIK G ++ V SA++DMY K G +
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 342 DEA----RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTA 397
D+A +QT N V WT++I G AQ+G+ +EALELF R + + P+H+ +
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELF-REMQVAGVKPNHVTIPS 393
Query: 398 ILTACNHAGFLEKG 411
+L AC + L G
Sbjct: 394 MLPACGNIAALGHG 407
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 168/357 (47%), Gaps = 42/357 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++ +++ + AL + M P K L +CA + G QIH ++
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
SG ++F+ + LV+ Y + ARKV M V D VSW SL++ + G +A L
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F EM +R + NF+I YA
Sbjct: 229 FDEM------------------------------------EERNVESWNFMISG----YA 248
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS-PTDHTLC 294
+ ++ + + +D + +N+M++AY+ C + L++F +M P TL
Sbjct: 249 AAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLV 308
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
++L+AC+SL SL +G VH + K G E F+A+ALVDMYSK G ID+A V TS +
Sbjct: 309 SVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR 368
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ W ++I + G G +ALE+F ++ E P+ I F +L+ACNH G L++
Sbjct: 369 DVSTWNSIISDLSVHGLGKDALEIFSEMVYEG-FKPNGITFIGVLSACNHVGMLDQA 424
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 138/259 (53%), Gaps = 4/259 (1%)
Query: 128 LVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI-KP 186
++ YA + +A++VF +M V D VSW +++ ++ G + +F +ML KP
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 187 NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLL 246
+ FTL SV+SAC +L +H ++ K G F+ +LVD Y+ C +ID +L +
Sbjct: 303 DGFTLVSVLSAC-ASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASL 306
TS++D +NS+IS S + DAL++F EM + F P T +L+AC+ + L
Sbjct: 362 FRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGML 421
Query: 307 IEGRQVHSLVIKMGS-ERNVFVASALVDMYSKGGDIDEARFVLDQTSV-KNNVLWTTMIM 364
+ R++ ++ + E + +VD+ + G I+EA ++++ + ++L +++
Sbjct: 422 DQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLG 481
Query: 365 GYAQSGRGLEALELFDRLL 383
+ G+ +A + +RLL
Sbjct: 482 ACKRFGQLEQAERIANRLL 500
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 6/213 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGM-NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N +T ++ + L++ M + T KP L + LS+CA + G +H Y+
Sbjct: 272 NAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYID 331
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+ G E FL++ALVD Y+KC I A +VFRA D +W S+I+ S +G G+DA
Sbjct: 332 KHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALE 391
Query: 175 LFKEMLGTHIKPNCFTLTSVISAC--VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD 232
+F EM+ KPN T V+SAC VG D + + + V + ++ +VD
Sbjct: 392 IFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHY--GCMVD 449
Query: 233 CYANCKQIDDSLLLLNE-TSEKDTIVYNSMISA 264
+I+++ L+NE +++ +I+ S++ A
Sbjct: 450 LLGRMGKIEEAEELVNEIPADEASILLESLLGA 482
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 49/310 (15%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYA---KCFAIVDARKVFRAMKVHDQVSWTSLIAGFS 164
Q HA+++++G + F +S LV F A + + A + + + + S+I ++
Sbjct: 57 QAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYA 116
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACV---GQKDALQHCSTLHAHVVKRGFR 221
+ A +F+EML + P+ ++ T V+ AC G ++ Q +H +K G
Sbjct: 117 NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ----IHGLFIKSGLV 172
Query: 222 TSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM 281
T FV +LV+ Y + + +L+ +D + +NS++SAY + +A LF EM
Sbjct: 173 TDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM 232
Query: 282 RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDI 341
ERNV + ++ Y+ G +
Sbjct: 233 E---------------------------------------ERNVESWNFMISGYAAAGLV 253
Query: 342 DEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
EA+ V D V++ V W M+ YA G E LE+F+++L + PD ++L+A
Sbjct: 254 KEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSA 313
Query: 402 CNHAGFLEKG 411
C G L +G
Sbjct: 314 CASLGSLSQG 323
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 3/182 (1%)
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA---NCKQIDDSLLLLNETSEKDTIVYNS 260
+L HA ++K G F LV A K + + +LN + +NS
Sbjct: 51 SLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNS 110
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG 320
+I AY+ + AL +F EM P ++ +L AC++ EGRQ+H L IK G
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 321 SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFD 380
+VFV + LV++Y + G + AR VLD+ V++ V W +++ Y + G EA LFD
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFD 230
Query: 381 RL 382
+
Sbjct: 231 EM 232
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 156/303 (51%), Gaps = 2/303 (0%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
IH + SG + SA+V Y+K IV+A K+F ++ D W +I G+ G
Sbjct: 128 IHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGF 187
Query: 169 GRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC 228
LF M +PNC+T+ ++ S + L ++HA +K + ++V C
Sbjct: 188 WDKGINLFNLMQHRGHQPNCYTMVALTSGLI-DPSLLLVAWSVHAFCLKINLDSHSYVGC 246
Query: 229 SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSP 288
+LV+ Y+ C I + + N SE D + +S+I+ YS+ +AL LF E+R P
Sbjct: 247 ALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKP 306
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
+ +L +C+ L+ + G++VHS VI++G E ++ V SAL+DMYSK G + A +
Sbjct: 307 DCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLF 366
Query: 349 DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
KN V + ++I+G G A E F +L E L PD I F+A+L C H+G L
Sbjct: 367 AGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEIL-EMGLIPDEITFSALLCTCCHSGLL 425
Query: 409 EKG 411
KG
Sbjct: 426 NKG 428
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 136/293 (46%), Gaps = 4/293 (1%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
D+ ++L M +P+ + S + +HA+ ++ + + ++ AL
Sbjct: 189 DKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCAL 248
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
V+ Y++C I A VF ++ D V+ +SLI G+S G ++A LF E+ + KP+C
Sbjct: 249 VNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDC 308
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
+ V+ +C D++ +H++V++ G V +L+D Y+ C + ++ L
Sbjct: 309 VLVAIVLGSCAELSDSVSG-KEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFA 367
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
EK+ + +NS+I + + A + F E+ + P + T +L C L +
Sbjct: 368 GIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNK 427
Query: 309 GRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLD-QTSVKNNVL 358
G+++ + + G E +V + G ++EA FV+ Q + + +L
Sbjct: 428 GQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGIL 480
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 130/298 (43%), Gaps = 8/298 (2%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
++H+++ +S + + ++ L FYA ++ ARK+F W S+I ++
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAH 85
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
Q LF ++L + +P+ FT + D + +H + G
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDT-KGLRCIHGIAIVSGLGFDQICG 144
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSG---DALQLFVEMRQK 284
++V Y+ I ++ L + D ++N MI Y C G + LF M+ +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYG---CCGFWDKGINLFNLMQHR 201
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
P +T+ + + + L+ VH+ +K+ + + +V ALV+MYS+ I A
Sbjct: 202 GHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASA 261
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
V + S + V +++I GY++ G EAL LF L + PD + +L +C
Sbjct: 262 CSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK-KPDCVLVAIVLGSC 318
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
IT +S+ + AL L + KP ++ L SCA+ + G ++H+Y++R G
Sbjct: 280 ITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGL 339
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E ++ + SAL+D Y+KC + A +F + + VS+ SLI G +G AF F E
Sbjct: 340 ELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTE 399
Query: 179 MLGTHIKPNCFTLTSVISAC 198
+L + P+ T ++++ C
Sbjct: 400 ILEMGLIPDEITFSALLCTC 419
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 72/388 (18%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK 143
KP S L L L Q+H Y+ + G+ N LS++L+ FY ++ DA K
Sbjct: 52 KPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHK 111
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD 203
VF M D +SW SL++G+ +G+ ++ LF E+ + + PN F+ T+ ++AC
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAAC----- 166
Query: 204 ALQHCSTL----HAHVVKRGFRTSNFVICS-LVDCYANCKQIDDSLLLLNETSEK----- 253
A H S L H+ +VK G N V+ + L+D Y C +DD++L+ EK
Sbjct: 167 ARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSW 226
Query: 254 --------------------------DTIVYNSMISA----------------------- 264
DT+ YN +I A
Sbjct: 227 NAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSS 286
Query: 265 --------YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLV 316
Y + SG+A + F +M +++L +L A ++LA + G +H+
Sbjct: 287 SWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACA 346
Query: 317 IKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEAL 376
K+G + V VASAL+DMYSK G + A + KN ++W MI GYA++G +EA+
Sbjct: 347 HKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAI 406
Query: 377 ELFDRLLTERELTPDHIYFTAILTACNH 404
+LF++L ER L PD F +L C+H
Sbjct: 407 KLFNQLKQERFLKPDRFTFLNLLAVCSH 434
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
Query: 155 SWTSLI---AGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTL 211
SW++++ A F + G R A E++ KP+ L ++ G + C L
Sbjct: 23 SWSTIVPALARFGSIGVLRAAV----ELINDGEKPDASPLVHLLRVS-GNYGYVSLCRQL 77
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCS 271
H +V K GF ++ + SL+ Y ++D+ + +E + D I +NS++S Y Q+
Sbjct: 78 HGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRF 137
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER-NVFVASA 330
+ + LF+E+ + P + + L AC+ L G +HS ++K+G E+ NV V +
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNC 197
Query: 331 LVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTP 390
L+DMY K G +D+A V K+ V W ++ +++G+ L F ++ P
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM-----PNP 252
Query: 391 DHIYFTAILTACNHAG 406
D + + ++ A +G
Sbjct: 253 DTVTYNELIDAFVKSG 268
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 127/308 (41%), Gaps = 40/308 (12%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N +T + + + A + T M+ + + L L++ A G IHA +
Sbjct: 289 NTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHK 348
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G + + ++SAL+D Y+KC + A +F M + + W +I+G++ NG +A L
Sbjct: 349 LGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKL 408
Query: 176 FKEMLGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
F ++ +KP+ FT ++++ C HC V G+
Sbjct: 409 FNQLKQERFLKPDRFTFLNLLAVC-------SHCEV--PMEVMLGYFE------------ 447
Query: 235 ANCKQIDDSLLLLNETSEKDTIVY-NSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
+++NE K ++ + S+I A Q G+ Q +++ F
Sbjct: 448 ----------MMINEYRIKPSVEHCCSLIRAMGQR---GEVWQAKQVIQEFGFGYDGVAW 494
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMG----SERNVFVASALVDMYSKGGDIDEARFVLD 349
+L ACS+ L + V + +I++G E V S L + + ++ + R ++
Sbjct: 495 RALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMR 554
Query: 350 QTSVKNNV 357
++ V V
Sbjct: 555 ESGVLKEV 562
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 107 LQIHAYLVRSGYEDNLFLSSALVDFYAKCFA--IVDARKVFRAMKVHDQVSWTSLIAGFS 164
LQIH + S +++ F+ S LV + A + AR + +W L G+S
Sbjct: 30 LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYS 89
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
++ ++ ++ EM IKPN T ++ AC L + V+K GF
Sbjct: 90 SSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFL-GLTAGRQIQVEVLKHGFDFDV 148
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
+V +L+ Y CK+ D+ + +E +E++ + +NS+++A +N + F EM K
Sbjct: 149 YVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGK 208
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
+F P + T+ +L+AC SL G+ VHS V+ E N + +ALVDMY+K G ++ A
Sbjct: 209 RFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
R V ++ KN W+ MI+G AQ G EAL+LF +++ E + P+++ F +L AC+H
Sbjct: 267 RLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSH 326
Query: 405 AGFLEKG 411
G ++ G
Sbjct: 327 TGLVDDG 333
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 147/305 (48%), Gaps = 6/305 (1%)
Query: 62 HSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDN 121
+S + S ++ + + M R KP+K L +CA G QI +++ G++ +
Sbjct: 88 YSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFD 147
Query: 122 LFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+++ + L+ Y C DARKVF M + VSW S++ NG+ F F EM+G
Sbjct: 148 VYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIG 207
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
P+ T+ ++SAC G L +H+ V+ R + + +LVD YA ++
Sbjct: 208 KRFCPDETTMVVLLSACGGN---LSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 242 DSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE-MRQKKFSPTDHTLCTILNAC 300
+ L+ +K+ +++MI +Q + +ALQLF + M++ P T +L AC
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFV-ASALVDMYSKGGDIDEAR-FVLDQTSVKNNVL 358
S + +G + + K+ + + + A+VD+ + G ++EA F+ + V+
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 359 WTTMI 363
W T++
Sbjct: 385 WRTLL 389
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 166/308 (53%), Gaps = 7/308 (2%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
+H ++ G+ + F + LV Y K I ARK+F M + VSWTS+I+G++ G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 169 GRDAFLLFKEMLGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
++A +F++M + PN +T SV AC ++ + +HA + G R + V
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAES-RIGKNIHARLEISGLRRNIVVS 169
Query: 228 CSLVDCYANCKQIDDSLLLLNET--SEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKK 285
SLVD Y C ++ + + + ++ + + SMI+AY+QN +A++LF
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 286 FS--PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDE 343
S L ++++ACSSL L G+ H LV + G E N VA++L+DMY+K G +
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 344 ARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
A + + + + +T+MIM A+ G G A++LFD ++ R + P+++ +L AC+
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGR-INPNYVTLLGVLHACS 348
Query: 404 HAGFLEKG 411
H+G + +G
Sbjct: 349 HSGLVNEG 356
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 163/345 (47%), Gaps = 11/345 (3%)
Query: 59 ITKHSKNASTDRALDLLTGMNR-LTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG 117
I+ ++ AL + M+ P++ + +C+ +G IHA L SG
Sbjct: 102 ISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISG 161
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ--VSWTSLIAGFSANGQGRDAFLL 175
N+ +SS+LVD Y KC + AR+VF +M + + VSWTS+I ++ N +G +A L
Sbjct: 162 LRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIEL 221
Query: 176 FKEMLG--THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
F+ T + N F L SVISAC LQ H V + G+ ++ V SL+D
Sbjct: 222 FRSFNAALTSDRANQFMLASVISAC-SSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDM 280
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
YA C + + + I Y SMI A +++ A++LF EM + +P TL
Sbjct: 281 YAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTL 340
Query: 294 CTILNACSSLASLIEGRQVHSLVI-KMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
+L+ACS + EG + SL+ K G + + +VDM + G +DEA +
Sbjct: 341 LGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIE 400
Query: 353 V---KNNVLWTTMIMGYAQSGRGLEALELFDRLL-TERELTPDHI 393
V + +LW ++ GR E RL+ + +++T +I
Sbjct: 401 VGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYI 445
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 169/329 (51%), Gaps = 2/329 (0%)
Query: 83 AKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDAR 142
++P++ V SC+ + G Q H ++ G + F+ + LV Y+ C +A
Sbjct: 132 SRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAI 191
Query: 143 KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK 202
+V + D ++S ++G+ G ++ + ++ N T S + +
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLR 251
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
D L +H+ +V+ GF +L++ Y C ++ + + ++T ++ + +++
Sbjct: 252 D-LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 263 SAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE 322
AY Q+ +AL LF +M K+ P ++T +LN+ + L+ L +G +H LV+K G
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+V V +ALV+MY+K G I++AR + ++ V W TMI G + G G EALE FDR+
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 383 LTERELTPDHIYFTAILTACNHAGFLEKG 411
+ E+ P+ I F +L AC+H GF+E+G
Sbjct: 431 IFTGEI-PNRITFIGVLQACSHIGFVEQG 458
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 6/322 (1%)
Query: 94 LSSCAKARNWHLGLQIHAYLV---RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKV 150
L CA + +G IHA+L+ +S ++ + ++L++ Y KC V ARK+F M
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 151 HDQVSWTSLIAGFSANGQGRDAFLLFKEM-LGTHIKPNCFTLTSVISACVGQKDALQHCS 209
+ VSW +++ G+ +G + LFK M +PN F T V +C ++
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSC-SNSGRIEEGK 156
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
H +K G + FV +LV Y+ C +++ +L++ D V++S +S Y +
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
+ L + + + F + T + L S+L L QVHS +++ G V
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 330 ALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELT 389
AL++MY K G + A+ V D T +N L TT++ Y Q EAL LF ++ T +E+
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT-KEVP 335
Query: 390 PDHIYFTAILTACNHAGFLEKG 411
P+ F +L + L++G
Sbjct: 336 PNEYTFAILLNSIAELSLLKQG 357
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 130/265 (49%), Gaps = 3/265 (1%)
Query: 101 RNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLI 160
R+ +L LQ+H+ +VR G+ + AL++ Y KC ++ A++VF + T+++
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 161 AGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF 220
+ + +A LF +M + PN +T ++++ + + L+ LH V+K G+
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNS-IAELSLLKQGDLLHGLVLKSGY 369
Query: 221 RTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE 280
R V +LV+ YA I+D+ + + +D + +N+MIS S + +AL+ F
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDR 429
Query: 281 MRQKKFSPTDHTLCTILNACSSLASLIEG-RQVHSLVIKMGSERNVFVASALVDMYSKGG 339
M P T +L ACS + + +G + L+ K + ++ + +V + SK G
Sbjct: 430 MIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAG 489
Query: 340 DIDEARFVLDQTSVKNNVL-WTTMI 363
+A + ++ +V+ W T++
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLL 514
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 75/135 (55%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
++ S + AL+L + M+ P++ L+S A+ G +H +++SGY +++
Sbjct: 315 QDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVM 374
Query: 124 LSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
+ +ALV+ YAK +I DARK F M D V+W ++I+G S +G GR+A F M+ T
Sbjct: 375 VGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG 434
Query: 184 IKPNCFTLTSVISAC 198
PN T V+ AC
Sbjct: 435 EIPNRITFIGVLQAC 449
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 260 SMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHS-LVIK 318
S +S Q L D L V +K P D L +L C++ + L G +H+ L++
Sbjct: 2 SALSVIEQRLLKWDKLASLVPKSKKTPFPIDR-LNELLKVCANSSYLRIGESIHAHLIVT 60
Query: 319 MGSER--NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEAL 376
S R + + ++L+++Y K + AR + D +N V W M+ GY SG E L
Sbjct: 61 NQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVL 120
Query: 377 ELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+LF + E P+ T + +C+++G +E+G
Sbjct: 121 KLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 166/316 (52%), Gaps = 17/316 (5%)
Query: 108 QIHAYLVRSGYEDN---LFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFS 164
Q+HA+ +R+ Y + LFL ++ + + A +VF +++ H W +LI +
Sbjct: 66 QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACA 125
Query: 165 AN-GQGRDAFLLFKEMLGT-HIKPNCFTLTSVISACV---GQKDALQHCSTLHAHVVKRG 219
+ + +AF+L+++ML P+ T V+ AC G + Q +H +VK G
Sbjct: 126 HDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ----VHCQIVKHG 181
Query: 220 FRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFV 279
F +V L+ Y +C +D + + +E E+ + +NSMI A + ALQLF
Sbjct: 182 FGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFR 241
Query: 280 EMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK---MGSERNVFVASALVDMYS 336
EM Q+ F P +T+ ++L+AC+ L SL G H+ +++ + +V V ++L++MY
Sbjct: 242 EM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYC 300
Query: 337 KGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERE-LTPDHIYF 395
K G + A V ++ W MI+G+A GR EA+ FDR++ +RE + P+ + F
Sbjct: 301 KCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTF 360
Query: 396 TAILTACNHAGFLEKG 411
+L ACNH GF+ KG
Sbjct: 361 VGLLIACNHRGFVNKG 376
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 147/316 (46%), Gaps = 19/316 (6%)
Query: 78 MNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFA 137
+ R + P K L +CA + G Q+H +V+ G+ ++++++ L+ Y C
Sbjct: 142 LERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 201
Query: 138 IVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA 197
+ ARKVF M VSW S+I G+ A LF+EM + +P+ +T+ SV+SA
Sbjct: 202 LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSA 260
Query: 198 CVGQKDALQHCSTLHAHVVKR---GFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKD 254
C G +L + HA ++++ V SL++ Y C + + + ++D
Sbjct: 261 CAGL-GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 255 TIVYNSMISAYSQNLCSGDALQLFVEM--RQKKFSPTDHTLCTILNACSSLASLIEGRQV 312
+N+MI ++ + + +A+ F M +++ P T +L AC+ + +GRQ
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY 379
Query: 313 HSLVIKMGSERNVFVASAL------VDMYSKGGDIDEA-RFVLDQTSVKNNVLWTTMIMG 365
+++ R+ + AL VD+ ++ G I EA V+ + V+W +++
Sbjct: 380 FDMMV-----RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Query: 366 YAQSGRGLEALELFDR 381
+ G +E E R
Sbjct: 435 CCKKGASVELSEEIAR 450
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 10/364 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHL---GLQIHAY 112
N I+ + + + + L+LL M+R + L + L +C N G+ IH Y
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 113 LVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGF-----SANG 167
+ G E ++ + +AL+D YAK ++ +A K+F M + V++ ++I+GF +
Sbjct: 278 TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDE 337
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
+AF LF +M ++P+ T + V+ AC K L++ +HA + K F++ F+
Sbjct: 338 ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAK-TLEYGRQIHALICKNNFQSDEFIG 396
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
+L++ YA +D + TS++D + SMI + QN A LF ++
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P ++T+ +++AC+ A+L G Q+ IK G + V ++ + MY+K G++ A V
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGF 407
+ + ++ MI AQ G EAL +F+ + T + P+ F +L AC H G
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKT-HGIKPNQQAFLGVLIACCHGGL 575
Query: 408 LEKG 411
+ +G
Sbjct: 576 VTQG 579
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 177/363 (48%), Gaps = 8/363 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +++ ++A++L K K AL C + + LG +H +V
Sbjct: 117 NSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVV 176
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G +FL + L+D Y+KC + A +F DQVSW SLI+G+ G + L
Sbjct: 177 NGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNL 236
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDA--LQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
+M + + L SV+ AC + ++ +H + K G V +L+D
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDM 296
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQ-----NLCSGDALQLFVEMRQKKFSP 288
YA + +++ L + K+ + YN+MIS + Q + S +A +LF++M+++ P
Sbjct: 297 YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEP 356
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
+ T +L ACS+ +L GRQ+H+L+ K + + F+ SAL+++Y+ G ++
Sbjct: 357 SPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCF 416
Query: 349 DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
TS ++ WT+MI + Q+ + A +LF +L + + P+ + +++AC L
Sbjct: 417 ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH-IRPEEYTVSLMMSACADFAAL 475
Query: 409 EKG 411
G
Sbjct: 476 SSG 478
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 163/324 (50%), Gaps = 10/324 (3%)
Query: 96 SCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVS 155
+ AK+ + LG H ++++S L+L + L++ Y KC + AR++F M + +S
Sbjct: 56 TAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIIS 115
Query: 156 WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHV 215
+ SLI+G++ G A LF E ++K + FT + C G++ L LH V
Sbjct: 116 FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC-GERCDLDLGELLHGLV 174
Query: 216 VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDAL 275
V G F+I L+D Y+ C ++D ++ L + E+D + +NS+IS Y + + + L
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPL 234
Query: 276 QLFVEMRQKKFSPTDHTLCTILNACS---SLASLIEGRQVHSLVIKMGSERNVFVASALV 332
L +M + + T + L ++L AC + + +G +H K+G E ++ V +AL+
Sbjct: 235 NLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALL 294
Query: 333 DMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGR-----GLEALELFDRLLTERE 387
DMY+K G + EA + KN V + MI G+ Q EA +LF + R
Sbjct: 295 DMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD-MQRRG 353
Query: 388 LTPDHIYFTAILTACNHAGFLEKG 411
L P F+ +L AC+ A LE G
Sbjct: 354 LEPSPSTFSVVLKACSAAKTLEYG 377
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 168/349 (48%), Gaps = 33/349 (9%)
Query: 63 SKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNL 122
++N +LD M + K ++ + L + + G IH +++ YE +
Sbjct: 93 ARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDA 152
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
F+ S+L+D Y+K + +ARKVF + D V + ++I+G++ N Q +A L K+M
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
IKP+ T ++IS ++ + L ++C +D Y
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILE-------------LMC--LDGY-------- 249
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
+ D + + S+IS N + A F +M P T+ T+L AC++
Sbjct: 250 ---------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT 300
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTM 362
LA + G+++H + G E + FV SAL+DMY K G I EA + +T K V + +M
Sbjct: 301 LAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSM 360
Query: 363 IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
I YA G +A+ELFD++ E DH+ FTAILTAC+HAG + G
Sbjct: 361 IFCYANHGLADKAVELFDQMEATGE-KLDHLTFTAILTACSHAGLTDLG 408
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 154/340 (45%), Gaps = 39/340 (11%)
Query: 78 MNRLTAKPSKSVLCTA------LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDF 131
M +LT PS L + + + + R + G +HA+LV SG +++ LV F
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 132 YAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTL 191
Y +C ++DARKVF M D +I + NG +++ F+EM +K + F +
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 192 TSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS 251
S++ A D + +H V+K + + F++ SL+D Y+ ++ ++ + ++
Sbjct: 121 PSLLKASRNLLDR-EFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 252 EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQ 311
E+D +V+N+MIS Y+ N + +AL L +M+ P T +++ S + + + +
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 312 VHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGR 371
+ L+ G + +V V WT++I G + +
Sbjct: 240 ILELMCLDGYKPDV-------------------------------VSWTSIISGLVHNFQ 268
Query: 372 GLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+A + F ++LT L P+ +L AC +++ G
Sbjct: 269 NEKAFDAFKQMLT-HGLYPNSATIITLLPACTTLAYMKHG 307
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 150/355 (42%), Gaps = 68/355 (19%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ ++ N+ D AL+L+ M L KP +S + RN +I +
Sbjct: 187 NAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCL 246
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
GY+ D VSWTS+I+G N Q AF
Sbjct: 247 DGYKP-------------------------------DVVSWTSIISGLVHNFQNEKAFDA 275
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
FK+ML + PN T+ +++ AC ++H +H + V G FV +L+D Y
Sbjct: 276 FKQMLTHGLYPNSATIITLLPACTTLA-YMKHGKEIHGYSVVTGLEDHGFVRSALLDMYG 334
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH-TLC 294
C I ++++L +T +K T+ +NSMI Y+ + + A++LF +M + DH T
Sbjct: 335 KCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQM-EATGEKLDHLTFT 393
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
IL ACS H+ + +G +N+F+ ++ R V
Sbjct: 394 AILTACS-----------HAGLTDLG--QNLFLLMQ-----------NKYRIVPRLEH-- 427
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLE 409
+ M+ ++G+ +EA E+ + E PD + A+L AC + G +E
Sbjct: 428 ----YACMVDLLGRAGKLVEAYEMIKAMRME----PDLFVWGALLAACRNHGNME 474
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 166/341 (48%), Gaps = 42/341 (12%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFA------IVDARKVFRAMKVHDQVSWTSLIA 161
QIHA ++++G + S A+ F + C + + A+ VF D W +I
Sbjct: 32 QIHARMLKTGLMQD---SYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 162 GFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFR 221
GFS + + + LL++ ML + N +T S++ AC A + + +HA + K G+
Sbjct: 89 GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKAC-SNLSAFEETTQIHAQITKLGYE 147
Query: 222 TSNFVICSLVDCYA-------------------------------NCKQIDDSLLLLNET 250
+ + SL++ YA ++D +L L +
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 251 SEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGR 310
+EK+ I + +MIS Y Q + +ALQLF EM+ P + +L L+AC+ L +L +G+
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 311 QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSG 370
+HS + K + + L+DMY+K G+++EA V K+ WT +I GYA G
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 371 RGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
G EA+ F + + + P+ I FTA+LTAC++ G +E+G
Sbjct: 328 HGREAISKFME-MQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 155/328 (47%), Gaps = 34/328 (10%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
+R+L L M +A + + L +C+ + QIHA + + GYE++++ ++L
Sbjct: 97 ERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSL 156
Query: 129 VDFYA-------------------------------KCFAIVDARKVFRAMKVHDQVSWT 157
++ YA K + A +FR M + +SWT
Sbjct: 157 INSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWT 216
Query: 158 SLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVK 217
++I+G+ ++A LF EM + ++P+ +L + +SAC Q AL+ +H+++ K
Sbjct: 217 TMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC-AQLGALEQGKWIHSYLNK 275
Query: 218 RGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQL 277
R + + C L+D YA C +++++L + +K + ++IS Y+ + +A+
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISK 335
Query: 278 FVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV-HSLVIKMGSERNVFVASALVDMYS 336
F+EM++ P T +L ACS + EG+ + +S+ + + +VD+
Sbjct: 336 FMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLG 395
Query: 337 KGGDIDEA-RFVLDQTSVKNNVLWTTMI 363
+ G +DEA RF+ + N V+W ++
Sbjct: 396 RAGLLDEAKRFIQEMPLKPNAVIWGALL 423
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 158/304 (51%), Gaps = 2/304 (0%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
++H Y ++ + N +++A V YAKC ++ A++VF ++ SW +LI G + +
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
R + +M + + P+ FT+ S++SAC K +L+ +H +++ FV
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLK-SLRLGKEVHGFIIRNWLERDLFVY 534
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
S++ Y +C ++ L + +K + +N++I+ Y QN AL +F +M
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
++ + ACS L SL GR+ H+ +K E + F+A +L+DMY+K G I ++ V
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGF 407
+ K+ W MIMGY G EA++LF+ + PD + F +LTACNH+G
Sbjct: 655 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSGL 713
Query: 408 LEKG 411
+ +G
Sbjct: 714 IHEG 717
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 167/334 (50%), Gaps = 7/334 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAK----PSKSVLCTALSSCAKARNWHLGLQIHA 111
N I S N ++ + LL M P + L T L CA+ R LG +H
Sbjct: 257 NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG 316
Query: 112 YLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRD 171
+ V+ + L L++AL+D Y+KC I +A+ +F+ + VSW +++ GFSA G
Sbjct: 317 WAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHG 376
Query: 172 AFLLFKEML--GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS 229
F + ++ML G +K + T+ + + C + L LH + +K+ F + V +
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCF-HESFLPSLKELHCYSLKQEFVYNELVANA 435
Query: 230 LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
V YA C + + + + K +N++I ++Q+ +L ++M+ P
Sbjct: 436 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
T+C++L+ACS L SL G++VH +I+ ER++FV +++ +Y G++ + + D
Sbjct: 496 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
K+ V W T+I GY Q+G AL +F +++
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 172/340 (50%), Gaps = 9/340 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I H+++ +LD M P +C+ LS+C+K ++ LG ++H +++R
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ E +LF+ +++ Y C + + +F AM+ VSW ++I G+ NG A +
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 584
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F++M+ I+ ++ V AC +L+ HA+ +K F+ CSL+D YA
Sbjct: 585 FRQMVLYGIQLCGISMMPVFGAC-SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYA 643
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
I S + N EK T +N+MI Y + + +A++LF EM++ +P D T
Sbjct: 644 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 703
Query: 296 ILNACSSLASLIEG-RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQTSV 353
+L AC+ + EG R + + G + N+ + ++DM + G +D+A R V ++ S
Sbjct: 704 VLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 763
Query: 354 KNNV-LWTTMIMGYAQSGRGLEALELFDRLLTER-ELTPD 391
+ +V +W +++ S R + LE+ +++ + EL P+
Sbjct: 764 EADVGIWKSLL----SSCRIHQNLEMGEKVAAKLFELEPE 799
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 8/329 (2%)
Query: 87 KSVLCTALSSCAKARNWHLGLQIHAYLVRSG-YEDNLFLSSALVDFYAKCFAIVDARKVF 145
+ L L + K ++ +G +IH + S ++ L + ++ YA C + D+R VF
Sbjct: 84 REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 146 RAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG-THIKPNCFTLTSVISACVGQKDA 204
A++ + W ++I+ +S N + F EM+ T + P+ FT VI AC G D
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
+ +H VVK G FV +LV Y + D+L L + E++ + +NSMI
Sbjct: 204 GIGLA-VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRV 262
Query: 265 YSQNLCSGDALQLFVEMRQKK----FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG 320
+S N S ++ L EM ++ F P TL T+L C+ + G+ VH +K+
Sbjct: 263 FSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR 322
Query: 321 SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFD 380
++ + + +AL+DMYSK G I A+ + + KN V W TM+ G++ G ++
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 381 RLLTERE-LTPDHIYFTAILTACNHAGFL 408
++L E + D + + C H FL
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 167/366 (45%), Gaps = 15/366 (4%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLT-AKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I+ +S+N D L+ M T P + +CA + +GL +H +V
Sbjct: 155 NAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVV 214
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
++G +++F+ +ALV FY + DA ++F M + VSW S+I FS NG ++FL
Sbjct: 215 KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFL 274
Query: 175 LFKEMLGTH----IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSL 230
L EM+ + P+ TL +V+ C +++ + +H VK + +L
Sbjct: 275 LLGEMMEENGDGAFMPDVATLVTVLPVCARERE-IGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
+D Y+ C I ++ ++ + K+ + +N+M+ +S GD F +RQ D
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS---AEGDTHGTFDVLRQMLAGGED 390
Query: 291 HTL--CTILNA---CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
TILNA C + L +++H +K N VA+A V Y+K G + A+
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
V K W +I G+AQS +L+ ++ L PD ++L+AC+
Sbjct: 451 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS-GLLPDSFTVCSLLSACSKL 509
Query: 406 GFLEKG 411
L G
Sbjct: 510 KSLRLG 515
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 17/237 (7%)
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS- 229
DAFLL +E LG ++ + G++ ++ +H V ++ V+C+
Sbjct: 78 DAFLLVREALGLLLQAS------------GKRKDIEMGRKIHQLVSGSTRLRNDDVLCTR 125
Query: 230 LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
++ YA C DDS + + K+ +N++IS+YS+N + L+ F+EM
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 290 DH-TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
DH T ++ AC+ ++ + G VH LV+K G +VFV +ALV Y G + +A +
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 349 DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTER---ELTPDHIYFTAILTAC 402
D +N V W +MI ++ +G E+ L ++ E PD +L C
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 13/252 (5%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N IT + +N DRAL + M + + +C+ + LG + HAY ++
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
ED+ F++ +L+D YAK +I + KVF +K SW ++I G+ +G ++A L
Sbjct: 626 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKL 685
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKR--GFRTSNFVICSLVDC 233
F+EM T P+ T V++AC L H + +K G + + ++D
Sbjct: 686 FEEMQRTGHNPDDLTFLGVLTAC--NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 234 YANCKQIDDSLLLLNE--TSEKDTIVYNSMISA--YSQNLCSGD--ALQLFVEMRQKKFS 287
Q+D +L ++ E + E D ++ S++S+ QNL G+ A +LF E+ +K
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF-ELEPEK-- 800
Query: 288 PTDHTLCTILNA 299
P ++ L + L A
Sbjct: 801 PENYVLLSNLYA 812
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 163/356 (45%), Gaps = 35/356 (9%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + N + + M +P L +C+ + +G +IH +
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G LF+ + LV Y KC + +AR V M D VSW SL+ G++ N + DA +
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
+EM I + T+ S++ A + + +T + VK F
Sbjct: 229 CREMESVKISHDAGTMASLLPA-------VSNTTTENVMYVKDMFF-------------- 267
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
+ +K + +N MI Y +N +A++L+ M F P ++ +
Sbjct: 268 -------------KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITS 314
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+L AC ++L G+++H + + N+ + +AL+DMY+K G +++AR V + ++
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRD 374
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V WT MI Y SGRG +A+ LF + L + L PD I F L AC+HAG LE+G
Sbjct: 375 VVSWTAMISAYGFSGRGCDAVALFSK-LQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 96/169 (56%)
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
T+H+ ++ R ++ + L+ YA+ K + + + +E E++ I+ N MI +Y N
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
G+ +++F M P +T +L ACS +++ GR++H K+G +FV +
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 330 ALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
LV MY K G + EAR VLD+ S ++ V W ++++GYAQ+ R +ALE+
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 135/310 (43%), Gaps = 49/310 (15%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
+H+ ++ N L L+ YA + ARKVF + + + +I + NG
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 169 GRDAFLLFKEMLGTHIKPNCFTLTSVISAC-------VGQKDALQHCSTLHAHVVKRGFR 221
+ +F M G +++P+ +T V+ AC +G+K +H K G
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK--------IHGSATKVGLS 172
Query: 222 TSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM 281
++ FV LV Y C + ++ L+L+E S +D + +NS++ Y+QN DAL++ EM
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 282 RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDI 341
K S T+ ++L A S+ +E ++V DM+ K G
Sbjct: 233 ESVKISHDAGTMASLLPAVSNTT----------------TENVMYVK----DMFFKMGK- 271
Query: 342 DEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
K+ V W MI Y ++ +EA+EL+ R+ + PD + T++L A
Sbjct: 272 ------------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPA 318
Query: 402 CNHAGFLEKG 411
C L G
Sbjct: 319 CGDTSALSLG 328
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 166/360 (46%), Gaps = 33/360 (9%)
Query: 83 AKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDAR 142
++P CA R LG I ++++ E + +A + +A C + +AR
Sbjct: 152 SRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENAR 211
Query: 143 KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK 202
KVF V D VSW LI G+ G+ A ++K M +KP+ T+ ++S+C
Sbjct: 212 KVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLG 271
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDC----------------------------- 233
D L + +V + G R + ++ +L+D
Sbjct: 272 D-LNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330
Query: 234 --YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
YA C +D S L ++ EKD +++N+MI Q DAL LF EM+ P +
Sbjct: 331 SGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEI 390
Query: 292 TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT 351
T+ L+ACS L +L G +H + K NV + ++LVDMY+K G+I EA V
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450
Query: 352 SVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+N++ +T +I G A G A+ F+ ++ + + PD I F +L+AC H G ++ G
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMI-DAGIAPDEITFIGLLSACCHGGMIQTG 509
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 164/345 (47%), Gaps = 48/345 (13%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDAR------KVFRAMKVHDQVSWTSLIA 161
QI A ++ +G + F SS L+ F C A+ ++R K+ + ++ + SW I
Sbjct: 71 QIQAQMIINGLILDPFASSRLIAF---C-ALSESRYLDYSVKILKGIENPNIFSWNVTIR 126
Query: 162 GFSANGQGRDAFLLFKEMLG---THIKPNCFTLTSVISACVGQK-DALQHCSTLHAHVVK 217
GFS + +++FLL+K+ML +P+ FT + C + +L H + HV+K
Sbjct: 127 GFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH--MILGHVLK 184
Query: 218 RGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQL 277
+ V + + +A+C ++++ + +E+ +D + +N +I+ Y + + A+ +
Sbjct: 185 LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 278 FVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK 337
+ M + P D T+ ++++CS L L G++ + V + G + + +AL+DM+SK
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSK 304
Query: 338 GGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSG--------------------------- 370
GDI EAR + D + V WTTMI GYA+ G
Sbjct: 305 CGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGS 364
Query: 371 ----RGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
RG +AL LF + T PD I L+AC+ G L+ G
Sbjct: 365 VQAKRGQDALALFQEMQTSNT-KPDEITMIHCLSACSQLGALDVG 408
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 160/351 (45%), Gaps = 40/351 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + K ++A+ + M KP + +SSC+ + + G + + Y+
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG-------- 167
+G + L +AL+D ++KC I +AR++F ++ VSWT++I+G++ G
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKL 345
Query: 168 -----------------------QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
+G+DA LF+EM ++ KP+ T+ +SAC Q A
Sbjct: 346 FDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC-SQLGA 404
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
L +H ++ K + + SLVD YA C I ++L + + ++++ Y ++I
Sbjct: 405 LDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGG 464
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
+ + + A+ F EM +P + T +L+AC + GR S +M S N
Sbjct: 465 LALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS---QMKSRFN 521
Query: 325 VFVA----SALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMIMGYAQSG 370
+ S +VD+ + G ++EA +++ ++ + +W ++ G G
Sbjct: 522 LNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG 572
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 104/228 (45%), Gaps = 6/228 (2%)
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD--CYANCKQIDDSLLL 246
F L + + + + + L H + A ++ G F L+ + + +D S+ +
Sbjct: 50 FVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKI 109
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK---KFSPTDHTLCTILNACSSL 303
L + +N I +S++ ++ L+ +M + + P T + C+ L
Sbjct: 110 LKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADL 169
Query: 304 ASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMI 363
G + V+K+ E V +A + M++ GD++ AR V D++ V++ V W +I
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229
Query: 364 MGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
GY + G +A+ ++ +L+ + PD + ++++C+ G L +G
Sbjct: 230 NGYKKIGEAEKAIYVY-KLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 194/427 (45%), Gaps = 77/427 (18%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCA-KARNWHLGLQIHAYLV 114
N IT S N A++L M KP + L+ A A + +Q HA +
Sbjct: 117 NAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAAL 176
Query: 115 RSGYEDNLFLSSALVDFYAKCFA----IVDARKVFRAMKVHDQVSWTSLIAGFSANG--- 167
+SG +S+ALV Y+KC + + ARKVF + D+ SWT+++ G+ NG
Sbjct: 177 KSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFD 236
Query: 168 ------QGRD-----------------------AFLLFKEMLGTHIKPNCFTLTSVISAC 198
+G D A + + M+ + I+ + FT SVI AC
Sbjct: 237 LGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC 296
Query: 199 VGQKDALQHCSTLHAHVVKR---GFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDT 255
LQ +HA+V++R F N SLV Y C + D++ + + KD
Sbjct: 297 A-TAGLLQLGKQVHAYVLRREDFSFHFDN----SLVSLYYKCGKFDEARAIFEKMPAKDL 351
Query: 256 IVYNSMISAYSQNLCSGDALQLFVEMRQKK------------------------------ 285
+ +N+++S Y + G+A +F EM++K
Sbjct: 352 VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE 411
Query: 286 -FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
F P D+ + +C+ L + G+Q H+ ++K+G + ++ +AL+ MY+K G ++EA
Sbjct: 412 GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEA 471
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
R V ++V W +I Q G G EA+++++ +L ++ + PD I +LTAC+H
Sbjct: 472 RQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEML-KKGIRPDRITLLTVLTACSH 530
Query: 405 AGFLEKG 411
AG +++G
Sbjct: 531 AGLVDQG 537
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 166/374 (44%), Gaps = 46/374 (12%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + AL+++ M + + + + +CA A LG Q+HAY++R
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 116 SGYEDNLF-LSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
ED F ++LV Y KC +AR +F M D VSW +L++G+ ++G +A L
Sbjct: 315 R--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKD---------------------ALQHCSTL-- 211
+FKEM +I ++ + G++ A++ C+ L
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 212 -------HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
HA ++K GF +S +L+ YA C ++++ + D++ +N++I+A
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLV-----IKM 319
Q+ +A+ ++ EM +K P TL T+L ACS + +GR+ + I
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 320 GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV-LWTTMIMGYAQSGRGLEALEL 378
G++ + L+D+ + G +A V++ K +W ++ G G +
Sbjct: 553 GADH----YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIA 608
Query: 379 FDRLLTERELTPDH 392
D+L L P+H
Sbjct: 609 ADKLFG---LIPEH 619
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 138/332 (41%), Gaps = 46/332 (13%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKV--HDQVSWTSLIAGFSANGQGRDAFLLF 176
E + + +V Y I AR VF V D V + ++I GFS N G A LF
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 177 KEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYAN 236
+M KP+ FT SV++ D + C HA +K G V +LV Y+
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK 196
Query: 237 CKQIDDSLL-----LLNETSEKDT--------------------------------IVYN 259
C SLL + +E EKD + YN
Sbjct: 197 CAS-SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 260 SMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM 319
+MIS Y +AL++ M + T +++ AC++ L G+QVH+ V++
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 320 GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELF 379
+ + ++LV +Y K G DEAR + ++ K+ V W ++ GY SG EA +F
Sbjct: 316 -EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 380 DRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ + L+ + +++ GF E+G
Sbjct: 375 KEMKEKNILS-----WMIMISGLAENGFGEEG 401
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 120/281 (42%), Gaps = 71/281 (25%)
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSE-------- 252
++ +LQ +H +++ GF+ ++ L+D Y +++ + L +E SE
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 253 -------------------------KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
+DT++YN+MI+ +S N A+ LF +M+ + F
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 288 PTDHTLCTILNACSSLA-SLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGD----ID 342
P + T ++L + +A + Q H+ +K G+ V++ALV +YSK +
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 343 EARFVLDQTSVKNNVLWTTMIMGYAQSG------------------------------RG 372
AR V D+ K+ WTTM+ GY ++G RG
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 373 L--EALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
EALE+ R+++ + D + +++ AC AG L+ G
Sbjct: 266 FYQEALEMVRRMVSS-GIELDEFTYPSVIRACATAGLLQLG 305
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 128/203 (63%)
Query: 209 STLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQN 268
T+H+ V++ GF + +V SL+ YANC + + + ++ EKD + +NS+I+ +++N
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 269 LCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVA 328
+AL L+ EM K P T+ ++L+AC+ + +L G++VH +IK+G RN+ +
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 329 SALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTEREL 388
+ L+D+Y++ G ++EA+ + D+ KN+V WT++I+G A +G G EA+ELF + + L
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 389 TPDHIYFTAILTACNHAGFLEKG 411
P I F IL AC+H G +++G
Sbjct: 188 LPCEITFVGILYACSHCGMVKEG 210
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 138/262 (52%), Gaps = 4/262 (1%)
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFS 164
LG IH+ ++RSG+ +++ ++L+ YA C + A KVF M D V+W S+I GF+
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
NG+ +A L+ EM IKP+ FT+ S++SAC + AL +H +++K G +
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSAC-AKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
L+D YA C +++++ L +E +K+++ + S+I + N +A++LF M
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 285 K-FSPTDHTLCTILNACSSLASLIEGRQV-HSLVIKMGSERNVFVASALVDMYSKGGDID 342
+ P + T IL ACS + EG + + + E + +VD+ ++ G +
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 343 EA-RFVLDQTSVKNNVLWTTMI 363
+A ++ N V+W T++
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLL 266
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++N + AL L T MN KP + + LS+CAK LG ++H Y+++
Sbjct: 58 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 117
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G NL S+ L+D YA+C + +A+ +F M + VSWTSLI G + NG G++A L
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 176 FKEMLGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFR 221
FK M T + P T ++ AC HC +VK GF
Sbjct: 178 FKYMESTEGLLPCEITFVGILYAC-------SHCG-----MVKEGFE 212
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTM 362
+A + G +HS+VI+ G ++V ++L+ +Y+ GD+ A V D+ K+ V W ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 363 IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
I G+A++G+ EAL L+ + + + PD ++L+AC G L G
Sbjct: 61 INGFAENGKPEEALALYTE-MNSKGIKPDGFTIVSLLSACAKIGALTLG 108
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 151/291 (51%), Gaps = 1/291 (0%)
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML 180
N S+ L++ Y + +V+ARKVF M +W ++IAG + LF+EM
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 181 GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
G P+ +TL SV S G + ++ +H + +K G V SL Y ++
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLR-SVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 142
Query: 241 DDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
D +++ ++ + +N++I +QN C L L+ M+ P T T+L++C
Sbjct: 143 QDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSC 202
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWT 360
S LA +G+Q+H+ IK+G+ V V S+L+ MYSK G + +A + ++ V+W+
Sbjct: 203 SDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWS 262
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+MI Y G+G EA+ELF+ + + + + + F +L AC+H+G +KG
Sbjct: 263 SMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 313
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%), Gaps = 4/299 (1%)
Query: 68 TDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSA 127
+ L L M+ L P + L + S A R+ +G QIH Y ++ G E +L ++S+
Sbjct: 72 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 131
Query: 128 LVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPN 187
L Y + + D V R+M V + V+W +LI G + NG L+K M + +PN
Sbjct: 132 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 191
Query: 188 CFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLL 247
T +V+S+C Q +HA +K G + V+ SL+ Y+ C + D+
Sbjct: 192 KITFVTVLSSCSDLAIRGQ-GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 250
Query: 248 NETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASL 306
+E ++D ++++SMISAY + +A++LF M Q + +L ACS
Sbjct: 251 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 310
Query: 307 IEGRQVHSLVI-KMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN-VLWTTMI 363
+G ++ +++ K G + + + +VD+ + G +D+A ++ +K + V+W T++
Sbjct: 311 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLL 369
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 117/248 (47%), Gaps = 9/248 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I +++N + L L M +P+K T LSSC+ G QIHA ++
Sbjct: 161 NTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK 220
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G + + S+L+ Y+KC + DA K F + D+V W+S+I+ + +GQG +A L
Sbjct: 221 IGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIEL 280
Query: 176 FKEML-GTHIKPNCFTLTSVISAC--VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD 232
F M T+++ N +++ AC G KD + V K GF+ +VD
Sbjct: 281 FNTMAEQTNMEINEVAFLNLLYACSHSGLKD--KGLELFDMMVEKYGFKPGLKHYTCVVD 338
Query: 233 CYANCKQIDDSLLLLNETSEK-DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
+D + ++ K D +++ +++SA + + + A ++F E+ Q P D
Sbjct: 339 LLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND- 395
Query: 292 TLCTILNA 299
+ C +L A
Sbjct: 396 SACYVLLA 403
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 159/328 (48%), Gaps = 41/328 (12%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK 143
K + + L +C + G QIH + R E +LFL ++L+ Y+K + +A+
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD 203
VF MK D VSW SLI G Q +A+ LF++M G + + T +I G+
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKG- 386
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
+I + L EKD I + +MIS
Sbjct: 387 -----------------------------------EISKCVELFGMMPEKDNITWTAMIS 411
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
A+ N +AL F +M QK+ P +T ++L+A +SLA LIEG Q+H V+KM
Sbjct: 412 AFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN 471
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL 383
++ V ++LV MY K G+ ++A + S N V + TMI GY+ +G G +AL+LF +L
Sbjct: 472 DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFS-ML 530
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
P+ + F A+L+AC H G+++ G
Sbjct: 531 ESSGKEPNGVTFLALLSACVHVGYVDLG 558
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 17/329 (5%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+KH++N + A + M+ + +++ + ++ W + ++ VR
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMP---VR 110
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
N +++ + + KC + A ++F + + VS+ ++I GF G+ +A L
Sbjct: 111 VTTSYNAMITAMIKN---KC-DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFL 166
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS-LVDCY 234
+ E T +K +++ V L+ A V +G V CS +V Y
Sbjct: 167 YAE---TPVK-----FRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGY 218
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK-KFSPTDHTL 293
+I D+ L + +E++ I + +MI Y + D LF+ MRQ+ +TL
Sbjct: 219 CKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTL 278
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
+ AC EG Q+H LV +M E ++F+ ++L+ MYSK G + EA+ V
Sbjct: 279 AVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN 338
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRL 382
K++V W ++I G Q + EA ELF+++
Sbjct: 339 KDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 31 FPVSDAKNFLCRQFFIKKFSGKTFENDC------------------ITKHSKNASTDRAL 72
F K+ + IK FSGK + C I+ N + AL
Sbjct: 364 FEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEAL 423
Query: 73 DLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFY 132
M + P+ + LS+ A + GLQIH +V+ ++L + ++LV Y
Sbjct: 424 CWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMY 483
Query: 133 AKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLT 192
KC DA K+F + + VS+ ++I+G+S NG G+ A LF + + +PN T
Sbjct: 484 CKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFL 543
Query: 193 SVISACV 199
+++SACV
Sbjct: 544 ALLSACV 550
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 14/185 (7%)
Query: 229 SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCS-GDALQLFVEMRQKKFS 287
+++ YA ++ + + +E + T YN+MI+A +N C G A +LF ++ +K
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEK--- 142
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLV-IKMGSERNVFVASALVDMYSKGGDIDEARF 346
+ T++ E +++ +K R+ ++ L+ Y + G +EA
Sbjct: 143 -NAVSYATMITGFVRAGRFDEAEFLYAETPVKF---RDSVASNVLLSGYLRAGKWNEAVR 198
Query: 347 VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
V +VK V ++M+ GY + GR ++A LFDR +TER + I +TA++ AG
Sbjct: 199 VFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDR-MTERNV----ITWTAMIDGYFKAG 253
Query: 407 FLEKG 411
F E G
Sbjct: 254 FFEDG 258
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 177/340 (52%), Gaps = 38/340 (11%)
Query: 108 QIHAYLVRSG-YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSAN 166
QIH +++ SG +L ++LV FY + A KVF M D S+ +I G++
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 167 GQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG-FRTSNF 225
G +A L+ +M+ I+P+ +T+ S++ C G ++ +H + +RG +SN
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLL-VCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 226 VIC-SLVDCYANCKQ-------------------------------IDDSLLLLNETSEK 253
++ +L+D Y CK+ ++ + + ++ ++
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 254 DTIVYNSMISAYSQNLCSGDAL-QLFVEMR-QKKFSPTDHTLCTILNACSSLASLIEGRQ 311
D + +NS++ YS+ C + +LF EM +K P T+ ++++ ++ L GR
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW 389
Query: 312 VHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGR 371
VH LVI++ + + F++SAL+DMY K G I+ A V + K+ LWT+MI G A G
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 372 GLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
G +AL+LF R + E +TP+++ A+LTAC+H+G +E+G
Sbjct: 450 GQQALQLFGR-MQEEGVTPNNVTLLAVLTACSHSGLVEEG 488
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 176/395 (44%), Gaps = 42/395 (10%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++K + AL L M +P + + + L C + LG +H ++ R
Sbjct: 201 NVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIER 260
Query: 116 SG--YEDNLFLSSALVDFYAKCFAIVDARKVFRAMK------------------------ 149
G Y NL LS+AL+D Y KC A++ F AMK
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQ 320
Query: 150 -VHDQ------VSWTSLIAGFSANG-QGRDAFLLFKEM-LGTHIKPNCFTLTSVISACVG 200
V DQ VSW SL+ G+S G R LF EM + +KP+ T+ S+IS
Sbjct: 321 AVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNS 260
+ L H +H V++ + F+ +L+D Y C I+ + ++ +EKD ++ S
Sbjct: 381 NGE-LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTS 439
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV-HSLVIKM 319
MI+ + + ALQLF M+++ +P + TL +L ACS + EG V + + K
Sbjct: 440 MITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKF 499
Query: 320 GSERNVFVASALVDMYSKGGDIDEARFVLDQTSV--KNNVLWTTMIMGYAQSGRGLEALE 377
G + +LVD+ + G ++EA+ ++ + + +W + I+ + G +E E
Sbjct: 500 GFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGS-ILSACRGGEDIETAE 558
Query: 378 --LFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
L + L E E ++ + I G+ +K
Sbjct: 559 LALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDK 593
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 121/301 (40%), Gaps = 47/301 (15%)
Query: 83 AKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDAR 142
KP + + + +S A G +H ++R + + FLSSAL+D Y KC I A
Sbjct: 364 VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF 423
Query: 143 KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK 202
VF+ D WTS+I G + +G G+ A LF M + PN TL +V++AC
Sbjct: 424 MVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS--- 480
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
H+ +V+ G N + D ET Y S++
Sbjct: 481 ---------HSGLVEEGLHVFN--------------HMKDKFGFDPETEH-----YGSLV 512
Query: 263 SAYSQNLCSGDALQLFVEMRQKKFS--PTDHTLCTILNACSSLASLIEGRQVHSLVIKMG 320
LC ++ ++ QKK P+ +IL+AC + + ++K+
Sbjct: 513 DL----LCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLE 568
Query: 321 SER--NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
E+ + S + + G D+ R ++ VK +++++ G+E L
Sbjct: 569 PEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVV--------GVEGLHR 620
Query: 379 F 379
F
Sbjct: 621 F 621
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 116/276 (42%), Gaps = 39/276 (14%)
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG-FRTSNFVICS 229
+ F L+ M+ + P+ T ++ A L +H H++ G N++ S
Sbjct: 116 ECFGLYSSMIRHRVSPDRQTFLYLMKA----SSFLSEVKQIHCHIIVSGCLSLGNYLWNS 171
Query: 230 LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
LV Y + + D +N MI Y++ S +AL+L+ +M P
Sbjct: 172 LVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPD 231
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGS--ERNVFVASALVDMYSKG--------- 338
++T+ ++L C L+ + G+ VH + + G N+ +++AL+DMY K
Sbjct: 232 EYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRA 291
Query: 339 ----------------------GDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEAL 376
GD++ A+ V DQ ++ V W +++ GY++ G +
Sbjct: 292 FDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTV 351
Query: 377 -ELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
ELF + ++ PD + ++++ + G L G
Sbjct: 352 RELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 244 LLLLNETSEKDTIVYNSMISAYS--QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
LL LN T + VYN+MISA S +N C G L+ M + + SP T ++ A S
Sbjct: 89 LLFLNFTPNPNVFVYNTMISAVSSSKNECFG----LYSSMIRHRVSPDRQTFLYLMKASS 144
Query: 302 SLASLIEGRQVHSLVIKMGS-ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWT 360
L+ E +Q+H +I G ++ ++LV Y + G+ A V + + +
Sbjct: 145 FLS---EVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFN 201
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
MI+GYA+ G LEAL+L+ +++++ + PD ++L C H
Sbjct: 202 VMIVGYAKQGFSLEALKLYFKMVSD-GIEPDEYTVLSLLVCCGH 244
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 155/340 (45%), Gaps = 40/340 (11%)
Query: 107 LQIHAYLVRSG---YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGF 163
LQIHA ++R + L+ L YA I + +F D +T+ I
Sbjct: 46 LQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTA 105
Query: 164 SANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTS 223
S NG AFLL+ ++L + I PN FT +S++ +C + L +H HV+K G
Sbjct: 106 SINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKL-----IHTHVLKFGLGID 160
Query: 224 NFVICSLVD-------------------------------CYANCKQIDDSLLLLNETSE 252
+V LVD CYA ++ + L + E
Sbjct: 161 PYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCE 220
Query: 253 KDTIVYNSMISAYSQNLCSGDALQLFVE-MRQKKFSPTDHTLCTILNACSSLASLIEGRQ 311
+D + +N MI Y+Q+ DAL LF + + + K P + T+ L+ACS + +L GR
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 312 VHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGR 371
+H V NV V + L+DMYSK G ++EA V + T K+ V W MI GYA G
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 372 GLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+AL LF+ + L P I F L AC HAG + +G
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 158/341 (46%), Gaps = 40/341 (11%)
Query: 58 CITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG 117
I S N D+A L + P++ + L SC+ G IH ++++ G
Sbjct: 101 AINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFG 156
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH-------------------------- 151
+ ++++ LVD YAK +V A+KVF M
Sbjct: 157 LGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFD 216
Query: 152 -----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGT-HIKPNCFTLTSVISACVGQKDAL 205
D VSW +I G++ +G DA +LF+++L KP+ T+ + +SAC Q AL
Sbjct: 217 SMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSAC-SQIGAL 275
Query: 206 QHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAY 265
+ +H V R + V L+D Y+ C +++++L+ N+T KD + +N+MI+ Y
Sbjct: 276 ETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGY 335
Query: 266 SQNLCSGDALQLFVEMRQ-KKFSPTDHTLCTILNACSSLASLIEG-RQVHSLVIKMGSER 323
+ + S DAL+LF EM+ PTD T L AC+ + EG R S+ + G +
Sbjct: 336 AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMI 363
+ LV + + G + A + ++ ++VLW++++
Sbjct: 396 KIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 168/336 (50%), Gaps = 33/336 (9%)
Query: 106 GLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSA 165
G ++H ++V+ G NL++ +ALV Y+ C + AR VF D SW +I+G++
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 166 NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNF 225
+ ++ L EM + P TL V+SAC KD C +H +V + S
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK-DLCKRVHEYVSECKTEPSLR 272
Query: 226 VICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQ--NL-------------- 269
+ +LV+ YA C ++D ++ + +D I + S++ Y + NL
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 270 ---------------CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHS 314
C ++L++F EM+ P + T+ ++L AC+ L SL G + +
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 315 LVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLE 374
+ K + +V V +AL+DMY K G ++A+ V ++ WT M++G A +G+G E
Sbjct: 393 YIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQE 452
Query: 375 ALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
A+++F + + + + PD I + +L+ACNH+G +++
Sbjct: 453 AIKVFFQ-MQDMSIQPDDITYLGVLSACNHSGMVDQ 487
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 154/337 (45%), Gaps = 34/337 (10%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFA--IVDARKVFRAMKVHDQVSWTSLIAGFSA 165
Q+H+ + G N L F+ + A K+F + D V W ++I G+S
Sbjct: 52 QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSK 111
Query: 166 NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNF 225
+ L+ ML + P+ T +++ AL LH HVVK G ++ +
Sbjct: 112 VDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLY 171
Query: 226 VICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKK 285
V +LV Y+ C +D + + + ++D +N MIS Y++ ++++L VEM +
Sbjct: 172 VQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNL 231
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDID--- 342
SPT TL +L+ACS + ++VH V + +E ++ + +ALV+ Y+ G++D
Sbjct: 232 VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAV 291
Query: 343 ----------------------------EARFVLDQTSVKNNVLWTTMIMGYAQSGRGLE 374
AR DQ V++ + WT MI GY ++G E
Sbjct: 292 RIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNE 351
Query: 375 ALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+LE+F R + + PD ++LTAC H G LE G
Sbjct: 352 SLEIF-REMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 188/405 (46%), Gaps = 47/405 (11%)
Query: 40 LCRQFFIKKFSGKTFE-NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCA 98
+ R F ++ F N I+ +++ + +++LL M R P+ L LS+C+
Sbjct: 188 MARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACS 247
Query: 99 KARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTS 158
K ++ L ++H Y+ E +L L +ALV+ YA C + A ++FR+MK D +SWTS
Sbjct: 248 KVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTS 307
Query: 159 LIAGFSANGQGR---------------------DAFL----------LFKEMLGTHIKPN 187
++ G+ G + D +L +F+EM + P+
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 188 CFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLL 247
FT+ SV++AC +L+ + ++ K + V +L+D Y C + + +
Sbjct: 368 EFTMVSVLTAC-AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 248 NETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI 307
++ ++D + +M+ + N +A+++F +M+ P D T +L+AC+ +
Sbjct: 427 HDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD 486
Query: 308 EGRQVHSLVIKMGSERNVFVA----SALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTM 362
+ R+ + KM S+ + + +VDM + G + EA +L + + N+++W +
Sbjct: 487 QARKFFA---KMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGAL 543
Query: 363 IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN-HAG 406
+G ++ EL + + EL PD+ A+L CN +AG
Sbjct: 544 -LGASRLHNDEPMAELAAKKIL--ELEPDNGAVYALL--CNIYAG 583
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 173/358 (48%), Gaps = 33/358 (9%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P L L S + R G ++H Y V++G E + ++S++L+ YA I KV
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKV 103
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEM-LGTHIKPNCFTLTSVISAC----- 198
F M D VSW LI+ + NG+ DA +FK M +++K + T+ S +SAC
Sbjct: 104 FDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKN 163
Query: 199 --VGQK--------------------DALQHCSTL-HAHVVKRGFRTSNFVIC--SLVDC 233
+G++ D C L A V R N V C S+V
Sbjct: 164 LEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKN-VKCWTSMVFG 222
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y + +ID++ +L + KD +++ +M++ Y Q +AL+LF M+ P + L
Sbjct: 223 YVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVL 282
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
++L C+ +L +G+ +H + + + V +ALVDMY+K G I+ A V +
Sbjct: 283 VSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE 342
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ WT++I G A +G AL+L+ + + D I F A+LTACNH GF+ +G
Sbjct: 343 RDTASWTSLIYGLAMNGMSGRALDLYYE-MENVGVRLDAITFVAVLTACNHGGFVAEG 399
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 156/328 (47%), Gaps = 35/328 (10%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTA-KPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I+ + N + A+ + M++ + K + + + LS+C+ +N +G +I+ ++V
Sbjct: 116 NGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV 175
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+ +E ++ + +ALVD + KC + AR VF +M+ + WTS++ G+ + G+ +A +
Sbjct: 176 -TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARV 234
Query: 175 LFKE-------------------------------MLGTHIKPNCFTLTSVISACVGQKD 203
LF+ M I+P+ F L S+++ C Q
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGC-AQTG 293
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
AL+ +H ++ + V +LVD YA C I+ +L + E E+DT + S+I
Sbjct: 294 ALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIY 353
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV-HSLVIKMGSE 322
+ N SG AL L+ EM T +L AC+ + EGR++ HS+ + +
Sbjct: 354 GLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQ 413
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQ 350
S L+D+ + G +DEA ++D+
Sbjct: 414 PKSEHCSCLIDLLCRAGLLDEAEELIDK 441
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
D AL+L M +P VL + L+ CA+ G IH Y+ + + + +AL
Sbjct: 261 DEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTAL 320
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
VD YAKC I A +VF +K D SWTSLI G + NG A L+ EM ++ +
Sbjct: 321 VDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDA 380
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
T +V++AC + H+ + + + L+D +D++ L++
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 249 ----ETSEKDTIVYNSMISA 264
E+ E VY S++SA
Sbjct: 441 KMRGESDETLVPVYCSLLSA 460
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%)
Query: 256 IVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSL 315
++YN M+ + + L LF E+R + P + TL +L + L +IEG +VH
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 316 VIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEA 375
+K G E + +V+++L+ MY+ G I+ V D+ ++ V W +I Y +GR +A
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 376 LELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ +F R+ E L D + L+AC+ LE G
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIG 167
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 182/391 (46%), Gaps = 36/391 (9%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++KN + + M +P + L +C + + G +H +
Sbjct: 113 NVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEV 172
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
S Y+ +L++ +AL+ Y + + AR++F M D VSW ++I +++ G +AF L
Sbjct: 173 SSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFEL 232
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKD-------------------------ALQHCS- 209
F +M + ++ + T + C+ + L+ CS
Sbjct: 233 FDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSL 292
Query: 210 --------TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSM 261
+H + + + V +L+ Y+ CK + +L++ +T E +NS+
Sbjct: 293 IGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSI 352
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
IS Y+Q S +A L EM F P TL +IL C+ +A+L G++ H +++
Sbjct: 353 ISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKC 412
Query: 322 ERN-VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFD 380
++ + ++LVD+Y+K G I A+ V D S ++ V +T++I GY G G AL LF
Sbjct: 413 FKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFK 472
Query: 381 RLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+T + PDH+ A+L+AC+H+ + +G
Sbjct: 473 E-MTRSGIKPDHVTVVAVLSACSHSKLVHEG 502
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 156/342 (45%), Gaps = 20/342 (5%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
AL L++ M + L +C+ LG +IH + S Y+ + + L+
Sbjct: 264 ALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLIT 323
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
Y+KC + A VFR + + +W S+I+G++ + +A L +EML +PN T
Sbjct: 324 MYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRG-FRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
L S++ C + LQH H ++++R F+ + SLVD YA +I + + +
Sbjct: 384 LASILPLCARIAN-LQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDL 442
Query: 250 TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEG 309
S++D + Y S+I Y G AL LF EM + P T+ +L+ACS + EG
Sbjct: 443 MSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEG 502
Query: 310 RQVHSLVIKMGSERNVFVA----SALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTM-- 362
+ L +KM E + S +VD+Y + G + +A+ ++ K + W T+
Sbjct: 503 ER---LFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLN 559
Query: 363 ---IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
I G Q G+ ++LL + P + A + A
Sbjct: 560 ACHIHGNTQIGKWAA-----EKLLEMKPENPGYYVLIANMYA 596
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 153/353 (43%), Gaps = 37/353 (10%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
LS+C R + G+Q+HA+ + SG E + L LV FY+ +A+ + +
Sbjct: 50 LSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHP 109
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
+ W LIA ++ N + +K M+ I+P+ FT SV+ AC G+ + +H
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKAC-GETLDVAFGRVVHG 168
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
+ +++S +V +L+ Y + + + L + E+D + +N++I+ Y+ +
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 274 ALQLFVEM---------------------------------RQKKFSPTDHTLCTI--LN 298
A +LF +M R + F + + I L
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
ACS + ++ G+++H L I + V + L+ MYSK D+ A V QT +
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCT 348
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W ++I GYAQ + EA L +L P+ I +IL C L+ G
Sbjct: 349 WNSIISGYAQLNKSEEASHLLREMLVA-GFQPNSITLASILPLCARIANLQHG 400
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 1/190 (0%)
Query: 193 SVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSE 252
S++SACV + L +HAH + G + ++ LV Y+ +++ ++ +
Sbjct: 48 SLLSACVDVRAFLAGVQ-VHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 253 KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV 312
+ +N +I++Y++N + + + M K P T ++L AC + GR V
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 313 HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRG 372
H + + +++V +AL+ MY + ++ AR + D+ ++ V W +I YA G
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 373 LEALELFDRL 382
EA ELFD++
Sbjct: 227 SEAFELFDKM 236
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 273 DALQLFVEMRQKKFSPTD-----HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
DA + F +R + S H+ ++L+AC + + + G QVH+ I G E + +
Sbjct: 21 DAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVL 80
Query: 328 ASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERE 387
LV YS +EA+ +++ + + + + W +I YA++ E + + R+++ +
Sbjct: 81 VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVS-KG 139
Query: 388 LTPDHIYFTAILTACN 403
+ PD + ++L AC
Sbjct: 140 IRPDAFTYPSVLKACG 155
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 155/304 (50%), Gaps = 2/304 (0%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
+IHA ++R+G+ + L + L++ + AR+VF M W +L G+ N
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
++ LL+K+M ++P+ FT V+ A + Q LHAHVVK GF V
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKA-ISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
LV Y ++ + L KD + +N+ ++ Q S AL+ F +M
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
T+ ++L+AC L SL G +++ K + N+ V +A +DM+ K G+ + AR +
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGF 407
++ +N V W+TMI+GYA +G EAL LF + E L P+++ F +L+AC+HAG
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG-LRPNYVTFLGVLSACSHAGL 326
Query: 408 LEKG 411
+ +G
Sbjct: 327 VNEG 330
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 157/328 (47%), Gaps = 8/328 (2%)
Query: 42 RQFFIKKFSGKTF-ENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKA 100
RQ F + + F N + +N +L L M L +P + + + ++
Sbjct: 63 RQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQL 122
Query: 101 RNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLI 160
++ G +HA++V+ G+ +++ LV Y K + A +F +M+V D V+W + +
Sbjct: 123 GDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFL 182
Query: 161 AGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF 220
A G A F +M ++ + FT+ S++SAC GQ +L+ ++ K
Sbjct: 183 AVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSAC-GQLGSLEIGEEIYDRARKEEI 241
Query: 221 RTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE 280
+ V + +D + C + + +L E +++ + +++MI Y+ N S +AL LF
Sbjct: 242 DCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTT 301
Query: 281 MRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVA----SALVDMYS 336
M+ + P T +L+ACS + EG++ SL+++ +++N+ + +VD+
Sbjct: 302 MQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ-SNDKNLEPRKEHYACMVDLLG 360
Query: 337 KGGDIDEARFVLDQTSVKNNV-LWTTMI 363
+ G ++EA + + V+ + +W ++
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 37/278 (13%)
Query: 90 LCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK 149
+ + LS+C + + +G +I+ + + N+ + +A +D + KC AR +F MK
Sbjct: 213 VVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK 272
Query: 150 VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
+ VSW+++I G++ NG R+A LF M ++PN T V+SAC
Sbjct: 273 QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS---------- 322
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
HA +V G R + ++ Q +D L E Y M+ +
Sbjct: 323 --HAGLVNEGKRYFSLMV-----------QSNDKNL------EPRKEHYACMVDLLGR-- 361
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
SG + + +++ P +L AC+ +I G++V ++++ + +
Sbjct: 362 -SGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSY-HV 419
Query: 330 ALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYA 367
L ++Y+ G D +D+ K L T + Y+
Sbjct: 420 LLSNIYAAAGKWD----CVDKVRSKMRKLGTKKVAAYS 453
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 189/429 (44%), Gaps = 74/429 (17%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + + + + AL+L GM + +L L +C + L H +++
Sbjct: 127 NSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ 186
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G ++NL + + L+ Y K + DA +F M V +++SW +I GFS A +
Sbjct: 187 IGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKI 246
Query: 176 FKEMLGTHIKPNCFTLTSVIS---ACVGQKDALQH----------------------CST 210
F+ M KP+ T TSV+S C +D L++ C+
Sbjct: 247 FEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAE 306
Query: 211 L---------HAHVVKRGFR----TSNFVI---------------------------CSL 230
L H +V+K GF + N +I SL
Sbjct: 307 LEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSL 366
Query: 231 VDCYANCKQIDDSLLLLNETSE--------KDTIVYNSMISAYSQNLCSGDALQLFVEMR 282
+ + + ++D++L L +E E + + + S+I + D+L+ F +M+
Sbjct: 367 ITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Query: 283 QKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDID 342
K T+C IL+ C+ L +L GR++H VI+ N+ V +ALV+MY+K G +
Sbjct: 427 FSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLS 486
Query: 343 EARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
E V + K+ + W ++I GY G +AL +FDR+++ PD I A+L+AC
Sbjct: 487 EGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISS-GFHPDGIALVAVLSAC 545
Query: 403 NHAGFLEKG 411
+HAG +EKG
Sbjct: 546 SHAGLVEKG 554
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 171/412 (41%), Gaps = 65/412 (15%)
Query: 7 ISDVLAVLPPSGSLRLPDLRHLHAFPVSDAKNFLCRQFFIKKFSGK-------------- 52
++++L + P +G R+ D +L F +N + IK FS +
Sbjct: 196 VNELLTLYPKAG--RMGDAYNL--FVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 53 --TFENDCITK------HSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWH 104
F+ D +T HS+ + L M S L S CA+
Sbjct: 252 REEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALS 311
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFS 164
+ ++H Y+++ G+E+ L +AL+ Y K + DA +FR ++ SW SLI F
Sbjct: 312 IAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFV 371
Query: 165 ANGQGRDAFLLFKEMLGTH----IKPNCFTLTSVISACVGQ---KDALQH---------- 207
G+ +A LF E+ + +K N T TSVI C Q D+L++
Sbjct: 372 DAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL 431
Query: 208 ------------CSTL---------HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLL 246
C+ L H HV++ + V +LV+ YA C + + L+
Sbjct: 432 ANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLV 491
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASL 306
+KD I +NS+I Y + + AL +F M F P L +L+ACS +
Sbjct: 492 FEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLV 551
Query: 307 IEGRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
+GR++ +S+ + G E + +VD+ + G + EA ++ ++ V
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 154/360 (42%), Gaps = 54/360 (15%)
Query: 90 LCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK 149
LC C R H + + ++ RSG L++ L+ YA+ ++DAR VF +
Sbjct: 65 LCLTAQQC---RQVHAQVLLSDFIFRSGS-----LAANLISVYARLGLLLDARNVFETVS 116
Query: 150 ---VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC--VGQKDA 204
+ D W S++ ++G +A L++ M + + + L ++ AC +G+
Sbjct: 117 LVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGR--- 173
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
C H V++ G + + V+ L+ Y ++ D+ L E ++ + +N MI
Sbjct: 174 FGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKG 233
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL--------------------------- 297
+SQ A+++F M++++F P + T ++L
Sbjct: 234 FSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVS 293
Query: 298 --------NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
+ C+ L +L +VH VIK G E + +AL+ +Y K G + +A +
Sbjct: 294 GEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFR 353
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERE---LTPDHIYFTAILTACNHAG 406
Q K W ++I + +G+ EAL LF L + + + +T+++ CN G
Sbjct: 354 QIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQG 413
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 15/213 (7%)
Query: 206 QHCSTLHAHVVKRGFR-TSNFVICSLVDCYANCKQIDD--------SLLLLNETSEKDTI 256
Q C +HA V+ F S + +L+ YA + D SL+LL+ D
Sbjct: 70 QQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLS-----DLR 124
Query: 257 VYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLV 316
++NS++ A + +AL+L+ MRQ+ + + L IL AC L R H+ V
Sbjct: 125 LWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 317 IKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEAL 376
I++G + N+ V + L+ +Y K G + +A + + V+N + W MI G++Q A+
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 377 ELFDRLLTERELTPDHIYFTAILTACNHAGFLE 409
++F+ + E E PD + +T++L+ + G E
Sbjct: 245 KIFEWMQRE-EFKPDEVTWTSVLSCHSQCGKFE 276
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 163/327 (49%), Gaps = 9/327 (2%)
Query: 88 SVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRA 147
S L A+ SC L +H +V+S + F+ LV Y + V A K+F
Sbjct: 35 SSLIAAVKSCVSIELCRL---LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 148 MKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI--KPNCFTLTSVISACV-GQKDA 204
M D VSW SLI+G+S G F + M+ + + +PN T S+ISACV G
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
C +H V+K G V+ + ++ Y + S L + S K+ + +N+MI
Sbjct: 152 EGRC--IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVI 209
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
+ QN + L F R+ P T +L +C + + + +H L++ G N
Sbjct: 210 HLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
+ +AL+D+YSK G ++++ V + + +++ WT M+ YA G G +A++ F+ L+
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE-LMV 328
Query: 385 ERELTPDHIYFTAILTACNHAGFLEKG 411
++PDH+ FT +L AC+H+G +E+G
Sbjct: 329 HYGISPDHVTFTHLLNACSHSGLVEEG 355
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 148/312 (47%), Gaps = 5/312 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGM--NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYL 113
N I+ +S + ++L+ M + + +P++ + +S+C + G IH +
Sbjct: 101 NSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLV 160
Query: 114 VRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
++ G + + + +A +++Y K + + K+F + + + VSW ++I NG
Sbjct: 161 MKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGL 220
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
F +P+ T +V+ +C ++ +H ++ GF + + +L+D
Sbjct: 221 AYFNMSRRVGHEPDQATFLAVLRSCE-DMGVVRLAQGIHGLIMFGGFSGNKCITTALLDL 279
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y+ +++DS + +E + D++ + +M++AY+ + DA++ F M SP T
Sbjct: 280 YSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTF 339
Query: 294 CTILNACSSLASLIEGRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
+LNACS + EG+ ++ + + + S +VD+ + G + +A ++ +
Sbjct: 340 THLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP 399
Query: 353 VK-NNVLWTTMI 363
++ ++ +W ++
Sbjct: 400 MEPSSGVWGALL 411
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
D + +++ A S S+ R +H V+K S R+ F+ LV Y + G A + D
Sbjct: 31 DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL-TERELTPDHIYFTAILTACNHAGFL 408
+ ++ V W ++I GY+ G + E+ R++ +E P+ + F ++++AC + G
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 409 EKG 411
E+G
Sbjct: 151 EEG 153
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 172/347 (49%), Gaps = 32/347 (9%)
Query: 65 NASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFL 124
N +ALD+ M P+ + +A+S+C+ + + G ++H+ V+ G+ D++ +
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 125 SSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
++LVD Y+KC + DARKVF ++K D +W S+I G+ G A+ LF M ++
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 449
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
+PN T ++IS + D + L + K G
Sbjct: 450 RPNIITWNTMISGYIKNGDEGE-AMDLFQRMEKDG------------------------- 483
Query: 245 LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
+++T +N +I+ Y QN +AL+LF +M+ +F P T+ ++L AC++L
Sbjct: 484 -----KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLL 538
Query: 305 SLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIM 364
R++H V++ + V +AL D Y+K GDI+ +R + K+ + W ++I
Sbjct: 539 GAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIG 598
Query: 365 GYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
GY G AL LF+++ T+ +TP+ ++I+ A G +++G
Sbjct: 599 GYVLHGSYGPALALFNQMKTQ-GITPNRGTLSSIILAHGLMGNVDEG 644
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 150/327 (45%), Gaps = 38/327 (11%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P + L CA + G IH+ +++ G L +S++++ YAKC + A K
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
FR M+ D ++W S++ + NG+ +A L KEM I P T +I G +
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI----GGYNQ 294
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
L C + K F I + D + +MIS
Sbjct: 295 LGKCDAAMDLMQK----METFGITA------------------------DVFTWTAMISG 326
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
N AL +F +M P T+ + ++ACS L + +G +VHS+ +KMG +
Sbjct: 327 LIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDD 386
Query: 325 VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
V V ++LVDMYSK G +++AR V D K+ W +MI GY Q+G +A ELF R +
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTR-MQ 445
Query: 385 ERELTPDHIYFTAILTACNHAGFLEKG 411
+ L P+ I + +++ G+++ G
Sbjct: 446 DANLRPNIITWNTMIS-----GYIKNG 467
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 164/382 (42%), Gaps = 42/382 (10%)
Query: 32 PVSDAKNFLCRQFFIKKFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLC 91
P S KN F KK ++ +N S A L + + +K +S
Sbjct: 30 PKSRKKNL----SFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYL 85
Query: 92 TALSSCAKARNWHLGLQIHAYLVRSGY--EDNLFLSSALVDFYAKCFAIVDARKVFRAMK 149
L SC + + HLG +HA R G E ++F+ + L+ YAKC I DARKVF +M+
Sbjct: 86 KLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR 142
Query: 150 VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
+ +W+++I +S + R+ LF+ M+ + P+ F ++ C D ++
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGD-VEAGK 201
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
+H+ V+K G + V S++ YA C ++D + E+D I +NS++ AY QN
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNG 261
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
+A++L EM ++ SP T ++ + L + + G +VF
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT-- 319
Query: 330 ALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELT 389
WT MI G +G +AL++F ++ +
Sbjct: 320 -----------------------------WTAMISGLIHNGMRYQALDMFRKMFLA-GVV 349
Query: 390 PDHIYFTAILTACNHAGFLEKG 411
P+ + + ++AC+ + +G
Sbjct: 350 PNAVTIMSAVSACSCLKVINQG 371
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 123/255 (48%), Gaps = 14/255 (5%)
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQV-----SWTSLIAGFSANGQGRDAFLL 175
N+ + ++ Y K +A +F+ M+ +V +W +IAG+ NG+ +A L
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F++M + PN T+ S++ AC A + +H V++R + V +L D YA
Sbjct: 512 FRKMQFSRFMPNSVTILSLLPACANLLGA-KMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
I+ S + KD I +NS+I Y + G AL LF +M+ + +P TL +
Sbjct: 571 KSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSS 630
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVA----SALVDMYSKGGDIDEA-RFVLDQ 350
I+ A + ++ EG++V + ++ ++ A SA+V +Y + ++EA +F+ +
Sbjct: 631 IILAHGLMGNVDEGKKV---FYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
Query: 351 TSVKNNVLWTTMIMG 365
+W + + G
Sbjct: 688 NIQSETPIWESFLTG 702
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 39/229 (17%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + +N D AL+L M P+ + + L +CA + +IH ++R
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR 552
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ + +AL D YAK I +R +F M+ D ++W SLI G+ +G A L
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALAL 612
Query: 176 FKEMLGTHIKPNCFTLTSVISA--CVGQKD-----------------ALQHCSTLHAHVV 216
F +M I PN TL+S+I A +G D AL+HCS
Sbjct: 613 FNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCS------- 665
Query: 217 KRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS-EKDTIVYNSMISA 264
++V Y +++++L + E + + +T ++ S ++
Sbjct: 666 ------------AMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTG 702
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 178/354 (50%), Gaps = 4/354 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I +++ + + D+ M P V+ ++ K G H +++R +
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVF-RAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
+ + ++L+ Y K + A K+F R + ++ +W +++ G+ LF+
Sbjct: 363 SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFR 422
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
++ I+ + + TSVIS+C A+ +LH +VVK + V+ SL+D Y
Sbjct: 423 KIQNLGIEIDSASATSVISSC-SHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKM 481
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+ + + E ++ + I +N+MI++Y S A+ LF M + F P+ TL T+L
Sbjct: 482 GDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 540
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
AC + SL G+ +H + + E N+ +++AL+DMY+K G ++++R + D + K+ V
Sbjct: 541 MACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAV 600
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W MI GY G A+ LFD+ + E ++ P F A+L+AC HAG +E+G
Sbjct: 601 CWNVMISGYGMHGDVESAIALFDQ-MEESDVKPTGPTFLALLSACTHAGLVEQG 653
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 166/356 (46%), Gaps = 7/356 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I H N R+L M P +S+CA+ +H+G +H +++
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 116 -SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ--GRDA 172
G++ N + ++ V FY+KC + DA VF M D V+WT++I+G NG+ G
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 173 FLLFKEMLGTHI-KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
+L G+ + KPN TL AC AL+ LH VK G +S FV S+
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQAC-SNLGALKEGRCLHGFAVKNGLASSKFVQSSMF 272
Query: 232 DCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
Y+ ++ L E ++D + S+I++ +++ ++ +F EM+ K P
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 292 TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT 351
+ ++N + + +G+ H VI+ + V ++L+ MY K + A + +
Sbjct: 333 VISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRI 392
Query: 352 SVKNN-VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
S + N W TM+ GY + ++ +ELF R + + D T+++++C+H G
Sbjct: 393 SEEGNKEAWNTMLKGYGKMKCHVKCIELF-RKIQNLGIEIDSASATSVISSCSHIG 447
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 161/332 (48%), Gaps = 6/332 (1%)
Query: 33 VSDAKNFLCRQFFIKKFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCT 92
+S A+ CR I + K N + + K + ++L + L + + +
Sbjct: 382 LSVAEKLFCR---ISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATS 438
Query: 93 ALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHD 152
+SSC+ LG +H Y+V++ + + + ++L+D Y K + A ++F +
Sbjct: 439 VISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-N 497
Query: 153 QVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLH 212
++W ++IA + Q A LF M+ + KP+ TL +++ ACV +L+ +H
Sbjct: 498 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACV-NTGSLERGQMIH 556
Query: 213 AHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSG 272
++ + + + +L+D YA C ++ S L + ++KD + +N MIS Y +
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 273 DALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALV 332
A+ LF +M + PT T +L+AC+ + +G+++ + + + N+ S LV
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLV 676
Query: 333 DMYSKGGDIDEAR-FVLDQTSVKNNVLWTTMI 363
D+ S+ G+++EA V+ + V+W T++
Sbjct: 677 DLLSRSGNLEEAESTVMSMPFSPDGVIWGTLL 708
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 143/307 (46%), Gaps = 8/307 (2%)
Query: 110 HAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQG 169
+A ++ G +N+F++S L+ YA + +VF + D W S+I +NG
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 170 RDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCST-LHAHVVKRG-FRTSNFVI 227
+ F ML + P+ FT V+SAC + H T +H V+K G F + V
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACA--ELLWFHVGTFVHGLVLKHGGFDRNTAVG 164
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF- 286
S V Y+ C + D+ L+ +E ++D + + ++IS + QN S L +M
Sbjct: 165 ASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSD 224
Query: 287 --SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
P TL ACS+L +L EGR +H +K G + FV S++ YSK G+ EA
Sbjct: 225 VDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEA 284
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
+ ++ WT++I A+SG E+ ++F + + + PD + + ++
Sbjct: 285 YLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWE-MQNKGMHPDGVVISCLINELGK 343
Query: 405 AGFLEKG 411
+ +G
Sbjct: 344 MMLVPQG 350
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I + +++A+ L M KPS L T L +C + G IH Y+
Sbjct: 502 NAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITE 561
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ +E NL LS+AL+D YAKC + +R++F A D V W +I+G+ +G A L
Sbjct: 562 TEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIAL 621
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F +M + +KP T +++SAC HA +V++G + F+ D
Sbjct: 622 FDQMEESDVKPTGPTFLALLSACT------------HAGLVEQGKKL--FLKMHQYDVKP 667
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
N K Y+ ++ S+ SG+ + + FSP T
Sbjct: 668 NLKH------------------YSCLVDLLSR---SGNLEEAESTVMSMPFSPDGVIWGT 706
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
+L++C + G ++ + + + + L +MYS G +EA
Sbjct: 707 LLSSCMTHGEFEMGIRMAERAVASDPQNDGYYI-MLANMYSAAGKWEEAE 755
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNS 260
Q +L+ +A ++ G + FV L+ YA+ + + S + + + +D ++NS
Sbjct: 36 QSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNS 95
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG 320
+I A+ N +L F M SP T +++AC+ L G VH LV+K G
Sbjct: 96 IIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG 155
Query: 321 S-ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELF 379
+RN V ++ V YSK G + +A V D+ ++ V WT +I G+ Q+G L
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 380 DRLLTERELT--PDHIYFTAILTACNHAGFLEKG 411
++ + P+ AC++ G L++G
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACSNLGALKEG 249
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 171/360 (47%), Gaps = 41/360 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N ++ ++ + A+ +L M KPS S + + L + A+ + LG IH Y++R
Sbjct: 194 NSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR 253
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ ++++ + L+D Y K + AR VF M + V+W SL++G S +DA L
Sbjct: 254 NQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEAL 313
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
M IKP+ T S+ S YA
Sbjct: 314 MIRMEKEGIKPDAITWNSLASG------------------------------------YA 337
Query: 236 NCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
+ + +L ++ + EK + + + ++ S S+N +AL++F++M+++ P
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAA 397
Query: 292 TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT 351
T+ T+L L+ L G++VH ++ + +VA+ALVDMY K GD+ A +
Sbjct: 398 TMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGI 457
Query: 352 SVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
K+ W M+MGYA GRG E + F +L E + PD I FT++L+ C ++G +++G
Sbjct: 458 KNKSLASWNCMLMGYAMFGRGEEGIAAFSVML-EAGMEPDAITFTSVLSVCKNSGLVQEG 516
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 159/374 (42%), Gaps = 75/374 (20%)
Query: 105 LGLQIHAYLVRSGYED-NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGF 163
LGL IH L++ G ++ + + SA + FY +C ++ A K+F M D ++W ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 164 SANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTS 223
+G A LF+EM + K T+ ++ C K+ +H +V++ G S
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVC-SNKEGFAEGRQIHGYVLRLGLE-S 122
Query: 224 NFVIC--------------------------------SLVDCYANCKQIDDSLLLLNETS 251
N +C S++ Y +DD++ LL+E
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 252 ----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI 307
+ D + +NS++S Y+ S DA+ + M+ P+ ++ ++L A + L
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 308 EGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMI---- 363
G+ +H +++ +V+V + L+DMY K G + AR V D KN V W +++
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 364 -------------------------------MGYAQSGRGLEALELFDRLLTERELTPDH 392
GYA G+ +AL++ + + E+ + P+
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGK-MKEKGVAPNV 361
Query: 393 IYFTAILTACNHAG 406
+ +TAI + C+ G
Sbjct: 362 VSWTAIFSGCSKNG 375
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 143/324 (44%), Gaps = 36/324 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N+ + + ++ + ++A++L M AK S + L C+ + G QIH Y++R
Sbjct: 58 NEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR 117
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH------------------------ 151
G E N+ + ++L+ Y++ + +RKVF +MK
Sbjct: 118 LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGL 177
Query: 152 -----------DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVG 200
D V+W SL++G+++ G +DA + K M +KP+ +++S++ A V
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA-VA 236
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNS 260
+ L+ +H ++++ +V +L+D Y + + ++ + K+ + +NS
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS 296
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG 320
++S S DA L + M ++ P T ++ + ++L + V + + G
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 321 SERNVFVASALVDMYSKGGDIDEA 344
NV +A+ SK G+ A
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNA 380
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 104/245 (42%), Gaps = 6/245 (2%)
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGR 170
+ G + + ++L YA A V MK + VSWT++ +G S NG R
Sbjct: 319 KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 378
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSL 230
+A +F +M + PN T+++++ +G L +H +++ +V +L
Sbjct: 379 NALKVFIKMQEEGVGPNAATMSTLLK-ILGCLSLLHSGKEVHGFCLRKNLICDAYVATAL 437
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
VD Y + ++ + K +N M+ Y+ + + F M + P
Sbjct: 438 VDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDA 497
Query: 291 HTLCTILNACSSLASLIEGRQVHSLV-IKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
T ++L+ C + + EG + L+ + G + S +VD+ + G +DEA +
Sbjct: 498 ITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQ 557
Query: 350 QTSVK 354
S+K
Sbjct: 558 TMSLK 562
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 159/296 (53%), Gaps = 13/296 (4%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E N+ +++V + I +A +F M D VSWT+++ G + NG+ +A LF
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M + N + ++I+ Q + + L + +R F + N +I + +
Sbjct: 228 M----PERNIISWNAMITG-YAQNNRIDEADQLFQVMPERDFASWNTMITGFI----RNR 278
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTIL 297
+++ + L + EK+ I + +MI+ Y +N + +AL +F +M R P T +IL
Sbjct: 279 EMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV--KN 355
+ACS LA L+EG+Q+H L+ K ++N V SAL++MYSK G++ AR + D V ++
Sbjct: 339 SACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRD 398
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ W +MI YA G G EA+E++++ + + P + + +L AC+HAG +EKG
Sbjct: 399 LISWNSMIAVYAHHGHGKEAIEMYNQ-MRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 48/314 (15%)
Query: 128 LVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPN 187
L+ K I +ARK+F + D V+WT +I G+ G R+A LF + + N
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKN 108
Query: 188 CFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLL 247
T T+++S + K L L + +R + N +++D YA +ID +L L
Sbjct: 109 VVTWTAMVSGYLRSKQ-LSIAEMLFQEMPERNVVSWN----TMIDGYAQSGRIDKALELF 163
Query: 248 NETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI 307
+E E++ + +NSM+ A Q +A+ LF M ++ + +++ + +
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVD 219
Query: 308 EGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR--------------------FV 347
E R++ + ERN+ +A++ Y++ IDEA F+
Sbjct: 220 EARRLFDCM----PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFI 275
Query: 348 -----------LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFT 396
D+ KN + WTTMI GY ++ EAL +F ++L + + P+ +
Sbjct: 276 RNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYV 335
Query: 397 AILTACNH-AGFLE 409
+IL+AC+ AG +E
Sbjct: 336 SILSACSDLAGLVE 349
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 59 ITKHSKNASTDRALDLLTGMNR-LTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG 117
IT + +N + AL++ + M R + KP+ + LS+C+ G QIH + +S
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKV--HDQVSWTSLIAGFSANGQGRDAFLL 175
++ N ++SAL++ Y+K ++ ARK+F V D +SW S+IA ++ +G G++A +
Sbjct: 362 HQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF 220
+ +M KP+ T +++ AC HA +V++G
Sbjct: 422 YNQMRKHGFKPSAVTYLNLLFACS------------HAGLVEKGM 454
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 162/313 (51%), Gaps = 37/313 (11%)
Query: 128 LVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKP- 186
L+ + K IV+AR+ F +M V D VSW ++I G++ +G+ +A LF E P
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE------SPV 278
Query: 187 -NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC----------------- 228
+ FT T+++S + Q ++ L + +R + N ++
Sbjct: 279 QDVFTWTAMVSGYI-QNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDV 337
Query: 229 ----------SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF 278
+++ YA C +I ++ L ++ ++D + + +MI+ YSQ+ S +AL+LF
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 279 VEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKG 338
V+M ++ + + L+ C+ + +L G+Q+H ++K G E FV +AL+ MY K
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 339 GDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAI 398
G I+EA + + + K+ V W TMI GY++ G G AL F+ + E L PD A+
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE-GLKPDDATMVAV 516
Query: 399 LTACNHAGFLEKG 411
L+AC+H G ++KG
Sbjct: 517 LSACSHTGLVDKG 529
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 3/245 (1%)
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML 180
N+ + ++ YA+C I +A+ +F M D VSW ++IAG+S +G +A LF +M
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 181 GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
+ N + +S +S C AL+ LH +VK G+ T FV +L+ Y C I
Sbjct: 402 REGGRLNRSSFSSALSTCA-DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 241 DDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
+++ L E + KD + +N+MI+ YS++ AL+ F M+++ P D T+ +L+AC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 301 SSLASLIEGRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN-VL 358
S + +GRQ +++ G N + +VD+ + G +++A ++ + + +
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 359 WTTMI 363
W T++
Sbjct: 581 WGTLL 585
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 1/207 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I +S++ + AL L M R + ++S +ALS+CA LG Q+H LV+ GY
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 440
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E F+ +AL+ Y KC +I +A +F+ M D VSW ++IAG+S +G G A F+
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFES 500
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M +KP+ T+ +V+SAC + + G ++ +VD
Sbjct: 501 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
Query: 239 QIDDSL-LLLNETSEKDTIVYNSMISA 264
++D+ L+ N E D ++ +++ A
Sbjct: 561 LLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 164/365 (44%), Gaps = 44/365 (12%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + +N + A L M P + ++ + RN +LG + +
Sbjct: 99 NGMISGYLRNGEFELARKLFDEM------PERDLVSWNVMIKGYVRNRNLGKARELFEIM 152
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
E ++ + ++ YA+ + DAR VF M + VSW +L++ + N + +A +L
Sbjct: 153 P--ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACML 210
Query: 176 FKEMLGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
FK + NC ++ V +K ++ + V R + N +I Y
Sbjct: 211 FKSRENWALVSWNC-----LLGGFVKKKKIVEARQFFDSMNV-RDVVSWNTIITG----Y 260
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
A +ID++ L +E+ +D + +M+S Y QN +A +LF +M ++
Sbjct: 261 AQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER---------- 310
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSE-------RNVFVASALVDMYSKGGDIDEARFV 347
++ + LA ++G + ++M E RNV + ++ Y++ G I EA+ +
Sbjct: 311 NEVSWNAMLAGYVQGER-----MEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTP-DHIYFTAILTACNHAG 406
D+ ++ V W MI GY+QSG EAL LF ++ ERE + F++ L+ C
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM--EREGGRLNRSSFSSALSTCADVV 423
Query: 407 FLEKG 411
LE G
Sbjct: 424 ALELG 428
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 23/253 (9%)
Query: 140 DARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACV 199
+A +VF+ M VS+ +I+G+ NG+ A LF EM + + + +I V
Sbjct: 82 EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM----PERDLVSWNVMIKGYV 137
Query: 200 GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYN 259
++ L L + +R + N +++ YA +DD+ + + EK+ + +N
Sbjct: 138 RNRN-LGKARELFEIMPERDVCSWN----TMLSGYAQNGCVDDARSVFDRMPEKNDVSWN 192
Query: 260 SMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT---ILNACSSLASLIEGRQVHSLV 316
+++SAY QN +A LF S + L + +L ++E RQ +
Sbjct: 193 ALLSAYVQNSKMEEACMLFK-------SRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 317 IKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEAL 376
+ R+V + ++ Y++ G IDEAR + D++ V++ WT M+ GY Q+ EA
Sbjct: 246 ----NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 377 ELFDRLLTERELT 389
ELFD++ E++
Sbjct: 302 ELFDKMPERNEVS 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
+ Y + +++L + ++ YN MIS Y +N A +LF EM ++ +
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
++ +L + R++ ++ ER+V + ++ Y++ G +D+AR V D+
Sbjct: 131 ----VMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 351 TSVKNNVLWTTMIMGYAQSGRGLEALELF 379
KN+V W ++ Y Q+ + EA LF
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLF 211
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 166/340 (48%), Gaps = 38/340 (11%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD--ARKVFRAMKVHDQVSWTSLIAGFSA 165
QIH +++R G + + ++ + L+ K +D AR+V ++ + WT++I G++
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 166 NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVK-RGFRTSN 224
G+ +A ++ M I P FT ++++ AC KD L HA + RGF
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKD-LNLGRQFHAQTFRLRGF-CFV 184
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYS------------------ 266
+V +++D Y C+ ID + + +E E+D I + +I+AY+
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244
Query: 267 -------------QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVH 313
QN +AL+ F M + + T+ ++AC+ L + +
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 314 SLVIKMG--SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGR 371
+ K G +V + SAL+DMYSK G+++EA V + KN +++MI+G A GR
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 372 GLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
EAL LF ++T+ E+ P+ + F L AC+H+G +++G
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 158/371 (42%), Gaps = 40/371 (10%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I ++ D A+ + M + P L +C ++ +LG Q HA R
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIA----------------- 161
+++ + ++D Y KC +I ARKVF M D +SWT LIA
Sbjct: 181 FCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFES 240
Query: 162 --------------GFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQH 207
GF+ N + ++A F M + I+ + T+ ISAC Q A ++
Sbjct: 241 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC-AQLGASKY 299
Query: 208 CSTLHAHVVKRGFRTSNFVIC--SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAY 265
K G+ S+ V+ +L+D Y+ C +++++ + + K+ Y+SMI
Sbjct: 300 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGL 359
Query: 266 SQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQV-HSLVIKMGSER 323
+ + + +AL LF M Q + P T L ACS + +GRQV S+ G +
Sbjct: 360 ATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQP 419
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ +VD+ + G + EA ++ SV+ + +W + +G + E E+
Sbjct: 420 TRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGAL-LGACRIHNNPEIAEIAAEH 478
Query: 383 LTERELTPDHI 393
L EL PD I
Sbjct: 479 LF--ELEPDII 487
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 173/325 (53%), Gaps = 8/325 (2%)
Query: 90 LCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK 149
+C L S A+ R+ GLQ+H Y+V+SG +++ L++FY+K D+R+ F
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 150 VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
+W+S+I+ F+ N + K+M+ +++P+ L S +C L C
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCA----ILSRCD 133
Query: 210 ---TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYS 266
++H +K G+ FV SLVD YA C +I + + +E +++ + ++ M+ Y+
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 267 QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVF 326
Q + +AL LF E + + D++ ++++ C++ L GRQ+H L IK + + F
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 327 VASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTER 386
V S+LV +YSK G + A V ++ VKN +W M+ YAQ + +ELF R+
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLS- 312
Query: 387 ELTPDHIYFTAILTACNHAGFLEKG 411
+ P+ I F +L AC+HAG +++G
Sbjct: 313 GMKPNFITFLNVLNACSHAGLVDEG 337
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 151/294 (51%), Gaps = 2/294 (0%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
+L+ L M +P VL +A SCA +G +H +++GY+ ++F+ S+LVD
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
YAKC IV ARK+F M + V+W+ ++ G++ G+ +A LFKE L ++ N ++
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNET 250
+SVIS C L+ +H +K F +S+FV SLV Y+ C + + + NE
Sbjct: 220 FSSVISVC-ANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEV 278
Query: 251 SEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGR 310
K+ ++N+M+ AY+Q+ + ++LF M+ P T +LNACS + EGR
Sbjct: 279 PVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGR 338
Query: 311 QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV-KNNVLWTTMI 363
+ + E ++LVDM + G + EA V+ + +W ++
Sbjct: 339 YYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 160/336 (47%), Gaps = 42/336 (12%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD---ARKVFRAMKVHDQVSWTSLIAGFS 164
QIHA L+++G + +S ++ F C + D A VF + + W ++I GFS
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFC--CASPSDMNYAYLVFTRINHKNPFVWNTIIRGFS 100
Query: 165 ANGQGRDAFLLFKEML--GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRT 222
+ A +F +ML +KP T SV A G+ + LH V+K G
Sbjct: 101 RSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA-YGRLGQARDGRQLHGMVIKEGLED 159
Query: 223 SNF---------VIC----------------------SLVDCYANCKQIDDSLLLLNETS 251
+F V C S++ +A C ID + L +E
Sbjct: 160 DSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP 219
Query: 252 EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQ 311
+++ + +NSMIS + +N DAL +F EM++K P T+ ++LNAC+ L + +GR
Sbjct: 220 QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW 279
Query: 312 VHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGR 371
+H +++ E N V +AL+DMY K G I+E V + K W +MI+G A +G
Sbjct: 280 IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGF 339
Query: 372 GLEALELFDRLLTERE-LTPDHIYFTAILTACNHAG 406
A++LF L ER L PD + F +LTAC H+G
Sbjct: 340 EERAMDLFSEL--ERSGLEPDSVSFIGVLTACAHSG 373
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 156/343 (45%), Gaps = 36/343 (10%)
Query: 56 NDCITKHSKNASTDRALDLLTGM--NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYL 113
N I S+++ + A+ + M + + KP + + + + G Q+H +
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 114 VRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSA-------- 165
++ G ED+ F+ + ++ Y C +++A ++F M D V+W S+I GF+
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 166 -----------------------NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK 202
NG+ +DA +F+EM +KP+ FT+ S+++AC
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNAC-AYL 271
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
A + +H ++V+ F ++ V+ +L+D Y C I++ L + +K +NSMI
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 263 SAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI-KMGS 321
+ N A+ LF E+ + P + +L AC+ + + L+ K
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 322 ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN-VLWTTMI 363
E ++ + +V++ G ++EA ++ V+ + V+W++++
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 37/246 (15%)
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICS--LVDCYANCKQIDDSLLLLNETSEKDTIVY 258
Q ++ +HA ++K G S+ V S L C A+ ++ + L+ + K+ V+
Sbjct: 34 QCSTMRELKQIHASLIKTGL-ISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVW 92
Query: 259 NSMISAYSQNLCSGDALQLFVEM--RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLV 316
N++I +S++ A+ +F++M P T ++ A L +GRQ+H +V
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 317 IKMGSERNVFVASALVDMY-------------------------------SKGGDIDEAR 345
IK G E + F+ + ++ MY +K G ID+A+
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
+ D+ +N V W +MI G+ ++GR +AL++F R + E+++ PD ++L AC +
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMF-REMQEKDVKPDGFTMVSLLNACAYL 271
Query: 406 GFLEKG 411
G E+G
Sbjct: 272 GASEQG 277
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +N ALD+ M KP + + L++CA G IH Y+VR
Sbjct: 227 NSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVR 286
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ +E N + +AL+D Y KC I + VF W S+I G + NG A L
Sbjct: 287 NRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDL 346
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFV--ICSLVDC 233
F E+ + ++P+ + V++AC + H + ++K + + +V+
Sbjct: 347 FSELERSGLEPDSVSFIGVLTACAHSGEV--HRADEFFRLMKEKYMIEPSIKHYTLMVNV 404
Query: 234 YANCKQIDDS-LLLLNETSEKDTIVYNSMISA 264
++++ L+ N E+DT++++S++SA
Sbjct: 405 LGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 182/392 (46%), Gaps = 38/392 (9%)
Query: 56 NDCITKHSKNASTDRALDLLTGM-NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I ++ N +A L + ++ P + + L CA+ + G +IH+Y++
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 115 RSGYE-DNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
R Y ++ + +AL+ FYA+ A F M D +SW +++ F+ + +
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFL 417
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQK------------------------------- 202
L +L I + T+ S++ C+ +
Sbjct: 418 NLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALL 477
Query: 203 DALQHCSTL-HAHVVKRGFRTSNFVIC--SLVDCYANCKQIDDSLLLLNETSEKDTIVYN 259
DA C + +AH + G ++ SL+ Y N DD+ +L E S D ++
Sbjct: 478 DAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWS 537
Query: 260 SMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM 319
M+ Y+++ C +A+ +F E++ + P T+ +L C+ LASL RQ H +I+
Sbjct: 538 LMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR- 596
Query: 320 GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELF 379
G ++ + L+D+Y+K G + A V + ++ V++T M+ GYA GRG EAL ++
Sbjct: 597 GGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIY 656
Query: 380 DRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+TE + PDH++ T +LTAC HAG ++ G
Sbjct: 657 SH-MTESNIKPDHVFITTMLTACCHAGLIQDG 687
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 163/329 (49%), Gaps = 8/329 (2%)
Query: 89 VLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM 148
V + +CA + G +H + + G+ +S ++++ YAKC + D +K+FR M
Sbjct: 23 VFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQM 82
Query: 149 KVHDQVSWTSLIAGFSANGQGRDAFLLFKEM-LGTHIKPNCFTLTSVISACVGQKDALQH 207
D V W ++ G S + GR+ FK M KP+ T V+ CV D+
Sbjct: 83 DSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 208 CSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI-DDSLLLLNETSEKDTIVYNSMISAYS 266
++H++++K G V +LV YA I D+ + ++KD + +N++I+ +S
Sbjct: 142 -KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFS 200
Query: 267 QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI---EGRQVHSLVIKMGS-E 322
+N DA + F M ++ P T+ +L C+S+ I GRQ+HS V++ +
Sbjct: 201 ENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQ 260
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+VFV ++LV Y + G I+EA + + K+ V W +I GYA + +A +LF L
Sbjct: 261 THVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNL 320
Query: 383 LTERELTPDHIYFTAILTACNHAGFLEKG 411
+ + +++PD + +IL C L G
Sbjct: 321 VHKGDVSPDSVTIISILPVCAQLTDLASG 349
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 162/325 (49%), Gaps = 7/325 (2%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAK-CFAIVDAR 142
KPS L C + + + G +H+Y++++G E + + +ALV YAK F DA
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 143 KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC--VG 200
F + D VSW ++IAGFS N DAF F ML +PN T+ +V+ C +
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVIC-SLVDCYANCKQIDDSLLLLNETSEKDTIVYN 259
+ A + +H++VV+R + ++ +C SLV Y +I+++ L KD + +N
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 260 SMISAYSQNLCSGDALQLFVEMRQK-KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK 318
+I+ Y+ N A QLF + K SP T+ +IL C+ L L G+++HS +++
Sbjct: 299 VVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358
Query: 319 MGS-ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALE 377
+ V +AL+ Y++ GD A + S K+ + W ++ +A S + + L
Sbjct: 359 HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418
Query: 378 LFDRLLTERELTPDHIYFTAILTAC 402
L LL E +T D + ++L C
Sbjct: 419 LLHHLLNE-AITLDSVTILSLLKFC 442
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 161/339 (47%), Gaps = 11/339 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCA---KARNWHLGLQIHAY 112
N I S+N A M + +P+ + + L CA K G QIH+Y
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSY 252
Query: 113 LV-RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRD 171
+V RS + ++F+ ++LV FY + I +A +F M D VSW +IAG+++N +
Sbjct: 253 VVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFK 312
Query: 172 AFLLFKEML-GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC-S 229
AF LF ++ + P+ T+ S++ C D L +H+++++ + + + +
Sbjct: 313 AFQLFHNLVHKGDVSPDSVTIISILPVCAQLTD-LASGKEIHSYILRHSYLLEDTSVGNA 371
Query: 230 LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
L+ YA + + S KD I +N+++ A++ + L L + + +
Sbjct: 372 LISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLD 431
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMG---SERNVFVASALVDMYSKGGDIDEA-R 345
T+ ++L C ++ + + ++VH +K G E + +AL+D Y+K G+++ A +
Sbjct: 432 SVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHK 491
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
L + + V + +++ GY SG +A LF + T
Sbjct: 492 IFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMST 530
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 150/332 (45%), Gaps = 40/332 (12%)
Query: 108 QIHAYLVRSGY---EDNLFLSSALVDFYAKCFAIVDARKVFRAM-KVHDQVSWTSLIAGF 163
++H Y V++G E+ L +AL+D YAKC + A K+F + + VS+ SL++G+
Sbjct: 453 EVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGY 512
Query: 164 SANGQGRDAFLLFKEMLGTHI-------------------------------KPNCFTLT 192
+G DA +LF EM T + +PN T+
Sbjct: 513 VNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIM 572
Query: 193 SVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSE 252
+++ C Q +L H ++++ G + +L+D YA C + + + +
Sbjct: 573 NLLPVC-AQLASLHLVRQCHGYIIRGGLGDIR-LKGTLLDVYAKCGSLKHAYSVFQSDAR 630
Query: 253 KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV 312
+D +++ +M++ Y+ + +AL ++ M + P + T+L AC + +G Q+
Sbjct: 631 RDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQI 690
Query: 313 H-SLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV-LWTTMIMGYAQSG 370
+ S+ G + + + VD+ ++GG +D+A + Q V+ N +W T++
Sbjct: 691 YDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYN 750
Query: 371 RGLEALELFDRLL-TERELTPDHIYFTAILTA 401
R + + LL E + T +H+ + + A
Sbjct: 751 RMDLGHSVANHLLQAESDDTGNHVLISNMYAA 782
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 62 HSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDN 121
++++ + A+ + + +P+ + L CA+ + HL Q H Y++R G D
Sbjct: 543 YAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD- 601
Query: 122 LFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+ L L+D YAKC ++ A VF++ D V +T+++AG++ +G+G++A +++ M
Sbjct: 602 IRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTE 661
Query: 182 THIKPNCFTLTSVISACVGQ---KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
++IKP+ +T++++AC +D LQ ++ G + + VD A
Sbjct: 662 SNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIR---TVHGMKPTMEQYACAVDLIARGG 718
Query: 239 QIDDSLLLLNETS-EKDTIVYNSMISA 264
++DD+ + + E + ++ +++ A
Sbjct: 719 RLDDAYSFVTQMPVEPNANIWGTLLRA 745
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 289 TDH-TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
TDH ++ AC+S++ L GR +H V K+G V+ ++++MY+K +D+ + +
Sbjct: 19 TDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKM 78
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
Q + V+W ++ G + S G E + F + E P + F +L C G
Sbjct: 79 FRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 175/361 (48%), Gaps = 9/361 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKP---SKSVLCTALSSCAKARNWHLGLQIHAY 112
N I +S + +RA + N+L AK + T L SC++ +G +H
Sbjct: 94 NTMIRGYSISDEPERAFSVF---NQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGI 150
Query: 113 LVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM-KVHDQVSWTSLIAGFSANGQGRD 171
+RSG+ L +AL+ FY C I DARKVF M + D V++++L+ G+ +
Sbjct: 151 ALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKAL 210
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
A LF+ M + + N TL S +SA D L + H +K G +I +L+
Sbjct: 211 ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGD-LSGAESAHVLCIKIGLDLDLHLITALI 269
Query: 232 DCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
Y I + + + KD + +N MI Y++ + + L +M+ +K P
Sbjct: 270 GMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSS 329
Query: 292 TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT 351
T +L++C+ + GR V L+ + + + +ALVDMY+K G +++A + ++
Sbjct: 330 TFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Query: 352 SVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTER-ELTPDHIYFTAILTACNHAGFLEK 410
K+ WT MI GY G EA+ LF+++ E ++ P+ I F +L AC+H G + +
Sbjct: 390 KDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVME 449
Query: 411 G 411
G
Sbjct: 450 G 450
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 148/299 (49%), Gaps = 4/299 (1%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
+IH Y+V++G + + F S L+ F + I A +F + + + ++I G+S +
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLAF-SSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
+ AF +F ++ + + F+ + + +C ++ + LH ++ GF +
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSC-SRELCVSIGEGLHGIALRSGFMVFTDLR 163
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEK-DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
+L+ Y C +I D+ + +E + D + ++++++ Y Q AL LF MR+ +
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARF 346
TL + L+A S L L H L IK+G + ++ + +AL+ MY K G I AR
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 347 VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
+ D K+ V W MI YA++G E + L ++ E+ + P+ F +L++C ++
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK-MKPNSSTFVGLLSSCAYS 341
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 110/230 (47%), Gaps = 7/230 (3%)
Query: 180 LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQ 239
L + + P C L + + +C +D ++ S +H ++VK G +F + L+ +++
Sbjct: 20 LESLLSPQCQKLINDLRSC---RDTVE-VSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLD 74
Query: 240 IDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNA 299
I + + S + ++N+MI YS + A +F ++R K + + T L +
Sbjct: 75 IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKS 134
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK-NNVL 358
CS + G +H + ++ G + +AL+ Y G I +AR V D+ + V
Sbjct: 135 CSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVT 194
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
++T++ GY Q + AL+LF R++ + E+ + + L+A + G L
Sbjct: 195 FSTLMNGYLQVSKKALALDLF-RIMRKSEVVVNVSTLLSFLSAISDLGDL 243
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 171/337 (50%), Gaps = 19/337 (5%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCF---AIVDA 141
P++ L + L+SC + G Q+H ++ G ++++++A++ Y +C A +A
Sbjct: 159 PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEA 214
Query: 142 RKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQ 201
VF A+K + V+W S+IA F G+ A +F M + + TL ++ S+
Sbjct: 215 WTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKS 274
Query: 202 KDALQH-----CSTLHAHVVKRGFRTSNFVICSLVDCYAN-CKQIDDSLLLLNETSE-KD 254
D + + C LH+ VK G T V +L+ Y+ + D L E S +D
Sbjct: 275 SDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRD 334
Query: 255 TIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHS 314
+ +N +I+A++ A+ LF ++RQ+K SP +T ++L AC+ L + +H+
Sbjct: 335 IVAWNGIITAFAV-YDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHA 393
Query: 315 LVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLE 374
VIK G + + ++L+ Y+K G +D V D ++ V W +M+ Y+ G+
Sbjct: 394 QVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDS 453
Query: 375 ALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
L +F ++ ++ PD F A+L+AC+HAG +E+G
Sbjct: 454 ILPVFQKM----DINPDSATFIALLSACSHAGRVEEG 486
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 164/333 (49%), Gaps = 27/333 (8%)
Query: 86 SKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY--EDNLFLSSALVDFYAKCFAIVDARK 143
S+ +CA+ RN G+ +H +++ Y N+ L++ L++ YAKC I+ AR+
Sbjct: 58 SQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQ 117
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD 203
VF M + VSWT+LI G+ G ++ F LF ML +H PN FTL+SV+++C +
Sbjct: 118 VFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCRYEPG 176
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQ---IDDSLLLLNETSEKDTIVYNS 260
+H +K G S +V +++ Y C ++ + K+ + +NS
Sbjct: 177 -----KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNS 231
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL---ASLIEGR------Q 311
MI+A+ A+ +F+ M T+LN CSSL + L+ Q
Sbjct: 232 MIAAFQCCNLGKKAIGVFMRMHSDG---VGFDRATLLNICSSLYKSSDLVPNEVSKCCLQ 288
Query: 312 VHSLVIKMGSERNVFVASALVDMYSKGGD--IDEARFVLDQTSVKNNVLWTTMIMGYAQS 369
+HSL +K G VA+AL+ +YS+ + D + ++ + ++ V W +I +A
Sbjct: 289 LHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY 348
Query: 370 GRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
A+ LF +L E+ L+PD F+++L AC
Sbjct: 349 DPE-RAIHLFGQLRQEK-LSPDWYTFSSVLKAC 379
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
+RA+ L + + P + L +CA L IHA +++ G+ + L+++L
Sbjct: 351 ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
+ YAKC ++ +VF M D VSW S++ +S +GQ +F++M I P+
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDS 467
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFR 221
T +++SAC HA V+ G R
Sbjct: 468 ATFIALLSACS------------HAGRVEEGLR 488
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 131/225 (58%), Gaps = 1/225 (0%)
Query: 187 NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLL 246
+ + L+S + +C +D + S H +K GF + ++ SLV Y + +++++ +
Sbjct: 119 DAYGLSSAVRSCGLNRD-FRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKV 177
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASL 306
E E++ + + +MIS ++Q L+L+ +MR+ P D+T +L+AC+ +L
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 307 IEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGY 366
+GR VH + MG + + ++++L+ MY K GD+ +A + DQ S K+ V W +MI GY
Sbjct: 238 GQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 367 AQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
AQ G ++A+ELF+ ++ + PD I + +L++C HAG +++G
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEG 342
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 163/320 (50%), Gaps = 8/320 (2%)
Query: 90 LCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK 149
L +A+ SC R++ G H ++ G+ +++L S+LV Y + +A KVF M
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 150 VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
+ VSWT++I+GF+ + L+ +M + PN +T T+++SAC G AL
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS-GALGQGR 241
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
++H + G ++ + SL+ Y C + D+ + ++ S KD + +NSMI+ Y+Q+
Sbjct: 242 SVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG 301
Query: 270 CSGDALQLFVEMRQKKFSPTDH-TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVA 328
+ A++LF M K + D T +L++C + EGR+ +L+ + G + +
Sbjct: 302 LAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY 361
Query: 329 SALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMIMG---YAQSGRGLEALELFDRLLT 384
S LVD+ + G + EA +++ +K N+V+W +++ + G+ A E +RL+
Sbjct: 362 SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAE--ERLML 419
Query: 385 ERELTPDHIYFTAILTACNH 404
E + H+ + + +
Sbjct: 420 EPDCAATHVQLANLYASVGY 439
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ ++ D L L + M + T+ P+ LS+C + G +H + G
Sbjct: 193 ISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGL 252
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ L +S++L+ Y KC + DA ++F D VSW S+IAG++ +G A LF+
Sbjct: 253 KSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFEL 312
Query: 179 ML-GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFV 226
M+ + KP+ T V+S+C HA +VK G + N +
Sbjct: 313 MMPKSGTKPDAITYLGVLSSC------------RHAGLVKEGRKFFNLM 349
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 156/293 (53%), Gaps = 40/293 (13%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E ++ + +V Y + + DARK+F M +VSWTS++ G+ NG+ DA LF+
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M +KP ++IS +GQK + A +
Sbjct: 260 M---PVKP-VIACNAMISG-LGQKGEI-----------------------------AKAR 285
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
++ DS+ N+ S + ++I + +N +AL LF+ M+++ PT TL +IL+
Sbjct: 286 RVFDSMKERNDAS------WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
C+SLASL G+QVH+ +++ + +V+VAS L+ MY K G++ +++ + D+ K+ ++
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W ++I GYA G G EAL++F + P+ + F A L+AC++AG +E+G
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEG 452
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I H +N ALDL M + +P+ L + LS CA + H G Q+HA LVR +
Sbjct: 303 IKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ +++++S L+ Y KC +V ++ +F D + W S+I+G++++G G +A +F E
Sbjct: 363 DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCE 422
Query: 179 M-LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
M L KPN T + +SAC + + G + +VD
Sbjct: 423 MPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRA 482
Query: 238 KQIDDSLLLLNE-TSEKDTIVYNSMISA 264
+ ++++ +++ T E D V+ S++ A
Sbjct: 483 GRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 136/293 (46%), Gaps = 22/293 (7%)
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML 180
N+ + LV Y K I +ARKVF M + VSWT+L+ G+ NG+ A LF +M
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 181 GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
+ N + T ++ + Q + L+ + + N S++ ++
Sbjct: 138 ----EKNKVSWTVMLIGFL-QDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRV 188
Query: 241 DDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
D++ + +E SE+ I + +M++ Y QN DA ++F M +K T ++
Sbjct: 189 DEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----------TEVSWT 238
Query: 301 SSLASLIEGRQVHSL--VIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
S L ++ ++ + ++ + V +A++ + G+I +AR V D +N+
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDAS 298
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W T+I + ++G LEAL+LF L+ ++ + P +IL+ C L G
Sbjct: 299 WQTVIKIHERNGFELEALDLF-ILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+I ++ L + K +NSM++ Y NL DA +LF EM + + + +
Sbjct: 32 KIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMK 91
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
+ E R+V L+ ERNV +ALV Y G +D A + + KN V
Sbjct: 92 N----GEIDEARKVFDLM----PERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVS 143
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPD 391
WT M++G+ Q GR +A +L+ E+ PD
Sbjct: 144 WTVMLIGFLQDGRIDDACKLY-------EMIPD 169
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 173/361 (47%), Gaps = 46/361 (12%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYED--NLFLSSALVDFYAKCFAIVDARKVFRAMKV- 150
L CA G ++HA L SG + +LS+AL FYA +V A+K+F + +
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 151 -HDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
D V WT+L++ FS G ++ LF EM ++ + ++ + C +D L
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLED-LGFAQ 131
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK---------DTIV--- 257
H VK G TS V +L+D Y C + + + E EK DT+V
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 258 -------------------YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH-TLCTIL 297
+ M++ Y + + L+L EM + + TLC++L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 298 NACSSLASLIEGRQVHSLVIK----MGSER---NVFVASALVDMYSKGGDIDEARFVLDQ 350
+AC+ +L+ GR VH +K MG E +V V +ALVDMY+K G+ID + V
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 351 TSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
+N V W + G A G+G +++F +++ RE+ PD + FTA+L+AC+H+G +++
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI--REVKPDDLTFTAVLSACSHSGIVDE 369
Query: 411 G 411
G
Sbjct: 370 G 370
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 151/355 (42%), Gaps = 50/355 (14%)
Query: 88 SVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD------- 140
SV+C CAK + Q H V+ G ++ + +AL+D Y KC + +
Sbjct: 113 SVVCL-FGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEE 171
Query: 141 ------------------------ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLF 176
R+VF M + V+WT ++AG+ G R+ L
Sbjct: 172 LEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELL 231
Query: 177 KEML---GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN-------FV 226
EM+ G + N TL S++SAC Q L +H + +K+ V
Sbjct: 232 AEMVFRCGHGL--NFVTLCSMLSAC-AQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMV 288
Query: 227 ICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
+LVD YA C ID S+ + +++ + +N++ S + + + +F +M ++
Sbjct: 289 GTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREV 347
Query: 287 SPTDHTLCTILNACSSLASLIEG-RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
P D T +L+ACS + EG R HSL G E V + +VD+ + G I+EA
Sbjct: 348 KPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAE 406
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILT 400
++ + V N + ++G +E E R L +++P + + +++
Sbjct: 407 ILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELI--QMSPGNTEYQILMS 459
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 170/325 (52%), Gaps = 6/325 (1%)
Query: 91 CTALSSCAKARNWHLGLQIHAYLVRSGYE-DNLFLSSALVDFYAKCFAIVDARKVFRAMK 149
C + C+ R + G Q+H+ +V+SG+ N+F+++ LVD+Y+ C + + + F A+
Sbjct: 217 CYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP 276
Query: 150 VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCS 209
D +SW S+++ + G D+ LF +M +P+ S ++ C D +Q
Sbjct: 277 EKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSD-IQSGK 335
Query: 210 TLHAHVVKRGFRTSNF-VICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQN 268
+H +V+K GF S+ V +L+D Y C I++S LL + NS++++
Sbjct: 336 QIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHC 395
Query: 269 LCSGDALQLFVEMRQKKFSPTDHTLCTILNACS-SLA-SLIEGRQVHSLVIKMGSERNVF 326
+ D +++F M + + TL T+L A S SL SL VH IK G +V
Sbjct: 396 GITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVA 455
Query: 327 VASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTER 386
V+ +L+D Y+K G + +R V D+ N T++I GYA++G G + +++ R +
Sbjct: 456 VSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKML-REMDRM 514
Query: 387 ELTPDHIYFTAILTACNHAGFLEKG 411
L PD + ++L+ C+H+G +E+G
Sbjct: 515 NLIPDEVTILSVLSGCSHSGLVEEG 539
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 6/346 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ +S+ + RA++L M + S S + LS C+ G+Q+H ++ G+
Sbjct: 84 ISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGF 143
Query: 119 EDNLFLSSALVDFYAKCFAIVD-ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
N+F+ SALV YA C +VD A K+F M + L+ F G+ + F ++
Sbjct: 144 GCNMFVRSALVGLYA-CLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYL 202
Query: 178 EMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN-FVICSLVDCYAN 236
M + N T +I C + + LH+ VVK G+ SN FV LVD Y+
Sbjct: 203 RMELEGVAKNGLTYCYMIRGCSHDRLVYEG-KQLHSLVVKSGWNISNIFVANVLVDYYSA 261
Query: 237 CKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTI 296
C + S+ N EKD I +NS++S + D+L LF +M+ P+ +
Sbjct: 262 CGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSF 321
Query: 297 LNACSSLASLIEGRQVHSLVIKMGSE-RNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
LN CS + + G+Q+H V+KMG + ++ V SAL+DMY K I+ + + N
Sbjct: 322 LNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLN 381
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
+++ G + +E+F L+ + D + + +L A
Sbjct: 382 LECCNSLMTSLMHCGITKDIIEMFG-LMIDEGTGIDEVTLSTVLKA 426
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 137/267 (51%), Gaps = 8/267 (2%)
Query: 120 DNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEM 179
D ++ + +D K ++ A + F M V D V++ LI+G S G A L+ EM
Sbjct: 44 DLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEM 103
Query: 180 LGTHIKPNCFTLTSVISACVGQ---KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYAN 236
+ ++ + T SV+S C + ++ +Q +H V+ GF + FV +LV YA
Sbjct: 104 VSCGLRESASTFPSVLSVCSDELFCREGIQ----VHCRVISLGFGCNMFVRSALVGLYAC 159
Query: 237 CKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTI 296
+ +D +L L +E +++ V N ++ + Q S ++++ M + + T C +
Sbjct: 160 LRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYM 219
Query: 297 LNACSSLASLIEGRQVHSLVIKMG-SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+ CS + EG+Q+HSLV+K G + N+FVA+ LVD YS GD+ + + K+
Sbjct: 220 IRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKD 279
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRL 382
+ W +++ A G L++L+LF ++
Sbjct: 280 VISWNSIVSVCADYGSVLDSLDLFSKM 306
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 146/297 (49%), Gaps = 4/297 (1%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYE-DNLFLSSALV 129
+LDL + M +PS + L+ C++ + G QIH Y+++ G++ +L + SAL+
Sbjct: 299 SLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALI 358
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
D Y KC I ++ +++++ + SL+ G +D +F M+ +
Sbjct: 359 DMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEV 418
Query: 190 TLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
TL++V+ A + ++L C+ +H +K G+ V CSL+D Y Q + S + +
Sbjct: 419 TLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD 478
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
E + S+I+ Y++N D +++ EM + P + T+ ++L+ CS + E
Sbjct: 479 ELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEE 538
Query: 309 GRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNNVLWTTMI 363
G + SL K G + + +VD+ + G +++A R +L + V W++++
Sbjct: 539 GELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLL 595
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASL 306
+E S +D + YN +IS S+ CS A++L+ EM + T ++L+ CS
Sbjct: 69 FDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFC 128
Query: 307 IEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGY 366
EG QVH VI +G N+FV SALV +Y+ +D A + D+ +N + ++ +
Sbjct: 129 REGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCF 188
Query: 367 AQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
Q+G E++ R+ E + + + + ++ C+H + +G
Sbjct: 189 CQTGESKRLFEVYLRMELE-GVAKNGLTYCYMIRGCSHDRLVYEG 232
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 158/309 (51%), Gaps = 36/309 (11%)
Query: 138 IVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA 197
I +A KVF + D +S T++I F + +A FK +L I+PN FT +VI +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 198 CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK------------------- 238
+D ++ LH + +K G ++ FV ++++CY
Sbjct: 103 STTSRD-VKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 239 ------------QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKK 285
+ +++L L E+ + +N++I +SQ + +A+ FV+M R+
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIK-MGSERNVFVASALVDMYSKGGDIDEA 344
P + T + A S++AS G+ +H+ IK +G NVFV ++L+ YSK G+++++
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 345 RFVLD--QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
+ + +N V W +MI GYA +GRG EA+ +F++++ + L P+++ +L AC
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 403 NHAGFLEKG 411
NHAG +++G
Sbjct: 342 NHAGLIQEG 350
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 147/325 (45%), Gaps = 41/325 (12%)
Query: 81 LTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD 140
L +P++ T + S +R+ LG Q+H Y ++ G N+F+ SA+++ Y K + D
Sbjct: 87 LGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTD 146
Query: 141 ARK-------------------------------VFRAMKVHDQVSWTSLIAGFSANGQG 169
AR+ +FRAM V+W ++I GFS G+
Sbjct: 147 ARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRN 206
Query: 170 RDAFLLFKEMLGTHIK-PNCFTLTSVISACVGQKDALQHCSTLHAHVVK-RGFRTSNFVI 227
+A F +ML + PN T I+A + + ++HA +K G R + FV
Sbjct: 207 EEAVNTFVDMLREGVVIPNESTFPCAITA-ISNIASHGAGKSIHACAIKFLGKRFNVFVW 265
Query: 228 CSLVDCYANCKQIDDSLLLLN--ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQK 284
SL+ Y+ C ++DSLL N E +++ + +NSMI Y+ N +A+ +F +M +
Sbjct: 266 NSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDT 325
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV---ASALVDMYSKGGDI 341
P + T+ +L AC+ + EG + + + N+ + +VDM S+ G
Sbjct: 326 NLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRF 385
Query: 342 DEARFVLDQTSVKNNV-LWTTMIMG 365
EA ++ + + W ++ G
Sbjct: 386 KEAEELIKSMPLDPGIGFWKALLGG 410
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRL-TAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I S+ + A++ M R P++S A+++ + + G IHA +
Sbjct: 194 NAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAI 253
Query: 115 RS-GYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ--VSWTSLIAGFSANGQGRD 171
+ G N+F+ ++L+ FY+KC + D+ F ++ + VSW S+I G++ NG+G +
Sbjct: 254 KFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEE 313
Query: 172 AFLLFKEML-GTHIKPNCFTLTSVISAC 198
A +F++M+ T+++PN T+ V+ AC
Sbjct: 314 AVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 238 KQIDDSLL-----LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
K ID L+ + +E E D I ++I + + +A Q F + P + T
Sbjct: 36 KHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFT 95
Query: 293 LCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
T++ + ++ + G+Q+H +KMG NVFV SA+++ Y K + +AR D T
Sbjct: 96 FGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR 155
Query: 353 VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
N V T +I GY + EAL LF R + ER + + + A++ + G E+
Sbjct: 156 DPNVVSITNLISGYLKKHEFEEALSLF-RAMPERSV----VTWNAVIGGFSQTGRNEEA 209
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 166/356 (46%), Gaps = 54/356 (15%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKC----FAIVDARKVFRAMKVHDQVSWTSLIAGF 163
QIHA ++SG + ++ ++ F A + A K+F M + SW ++I GF
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 164 SANGQGRD--AFLLFKEMLGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF 220
S + + + A LF EM+ ++PN FT SV+ AC + +Q +H +K GF
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKAC-AKTGKIQEGKQIHGLALKYGF 159
Query: 221 RTSNFVICSLVDCYANCKQIDDS-LLLLNETSEKDTIV---------------------- 257
FV+ +LV Y C + D+ +L EKD +V
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 258 ----------------------YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
+N+MIS YS N DA+++F EM++ P TL +
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+L A S L SL G +H G + + SAL+DMYSK G I++A V ++ +N
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ W+ MI G+A G+ +A++ F + + + + P + + +LTAC+H G +E+G
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCK-MRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 164/361 (45%), Gaps = 52/361 (14%)
Query: 54 FENDCITKHSKNASTDRALDLLT----GMNRLTAKPSKSVLCTALSSCAKARNWHLGLQI 109
F + I + + D+AL +T M+ +P++ + L +CAK G QI
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 110 HAYLVRSGYEDNLFLSSALVDFYAKCFAIVDAR--------------------------- 142
H ++ G+ + F+ S LV Y C + DAR
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 143 ------------------KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
+F M+ VSW ++I+G+S NG +DA +F+EM I
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
+PN TL SV+ A + + +L+ LH + G R + + +L+D Y+ C I+ ++
Sbjct: 271 RPNYVTLVSVLPA-ISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 245 LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
+ ++ I +++MI+ ++ + +GDA+ F +MRQ P+D +L ACS
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 305 SLIEGRQVHSLVIKM-GSERNVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNNVLWTTM 362
+ EGR+ S ++ + G E + +VD+ + G +DEA F+L+ ++V+W +
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 363 I 363
+
Sbjct: 450 L 450
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 53/259 (20%)
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC----KQIDDSLLLLNETSEKDTIVYNS 260
++ S +HA +K G ++ A + +D + + N+ +++ +N+
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 261 MISAYSQNLCSGD--ALQLFVEMRQKKF-SPTDHTLCTILNACSSLASLIEGRQVHSLVI 317
+I +S++ A+ LF EM +F P T ++L AC+ + EG+Q+H L +
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 318 KMGSERNVFVASALVDM------------------------------------------- 334
K G + FV S LV M
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 335 --YSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDH 392
Y + GD AR + D+ ++ V W TMI GY+ +G +A+E+F R + + ++ P++
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF-REMKKGDIRPNY 274
Query: 393 IYFTAILTACNHAGFLEKG 411
+ ++L A + G LE G
Sbjct: 275 VTLVSVLPAISRLGSLELG 293
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 193/398 (48%), Gaps = 37/398 (9%)
Query: 45 FIKKFSG-KTFENDCITKH-SKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARN 102
+K F+G +F C+ + S++ +D+ M+ PS + + L +C K N
Sbjct: 60 ILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMEN 119
Query: 103 WHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAG 162
G IHA +++G +++ + LV Y++ I A+K F + + VSW SL+ G
Sbjct: 120 MVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHG 179
Query: 163 FSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRT 222
+ +G+ +A +F ++ + + + +IS+ + D CS A +K +
Sbjct: 180 YLESGELDEARRVFDKI----PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSP-AS 234
Query: 223 SNFVICSLVDC---------------------------YANCKQIDDSLLLLNETSEKDT 255
N +I V+C Y + + L S+KD
Sbjct: 235 WNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDK 294
Query: 256 IVYNSMISAYSQNLCSGDALQLFVEM--RQKKFSPTDHTLCTILNACSSLASLIEGRQVH 313
+VY++MI+ Y+QN DAL+LF +M R P + TL ++++A S L + G V
Sbjct: 295 LVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE 354
Query: 314 SLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGL 373
S + + G + + ++++L+D+Y KGGD +A + + K+ V ++ MIMG +G
Sbjct: 355 SYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMAT 414
Query: 374 EALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
EA LF ++ E+++ P+ + FT +L+A +H+G +++G
Sbjct: 415 EANSLFTAMI-EKKIPPNVVTFTGLLSAYSHSGLVQEG 451
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 155/329 (47%), Gaps = 34/329 (10%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVD---FYAKCFA---IVDARKVFRAMKVHDQVSWTSLIA 161
Q+HA LV + Y L LV + K F+ + +++ + HD SW L+
Sbjct: 21 QVHAQLVVNRYN---HLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVR 77
Query: 162 GFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFR 221
S + + ++ ++ +M + I P+ +TSV+ AC G+ + + +HA +K G
Sbjct: 78 FLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRAC-GKMENMVDGKPIHAQALKNGLC 136
Query: 222 TSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM 281
+V LV Y+ I+ + ++ +EK+T+ +NS++ Y ++ +A ++F ++
Sbjct: 137 GCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI 196
Query: 282 RQKKFSPTDHTLCT------ILNACSSLASL----------IEGRQVHSLVIKMG----- 320
+K + + + + NACS +++ + G V+ +K+
Sbjct: 197 PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFD 256
Query: 321 --SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
++N ++ Y+K GD+ A + S K+ +++ MI Y Q+G+ +AL+L
Sbjct: 257 AMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKL 316
Query: 379 FDRLLTERE-LTPDHIYFTAILTACNHAG 406
F ++L + PD I +++++A + G
Sbjct: 317 FAQMLERNSYIQPDEITLSSVVSANSQLG 345
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 179/365 (49%), Gaps = 37/365 (10%)
Query: 83 AKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAK--CFAIVD 140
+P++ L++C + + LG+QIH +V+SG+ +++F+S++L+ Y K + D
Sbjct: 177 VQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDD 236
Query: 141 ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH-IKPNCFTLTSVISACV 199
K+F + D SW ++++ G+ AF LF EM + FTL++++S+C
Sbjct: 237 VLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296
Query: 200 GQKDALQHCSTLHAHVVKRGF----RTSNFVI---------------------------C 228
L LH ++ G +N +I
Sbjct: 297 -DSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 229 SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSP 288
++ Y + +D ++ + +EK+TI YN++++ + +N AL+LF +M Q+
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
TD +L + ++AC ++ Q+H IK G+ N + +AL+DM ++ + +A +
Sbjct: 416 TDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF 475
Query: 349 DQ--TSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
DQ +++ ++ T++I GYA++G +A+ LF R L E++L D + T IL C G
Sbjct: 476 DQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLG 535
Query: 407 FLEKG 411
F E G
Sbjct: 536 FREMG 540
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 174/383 (45%), Gaps = 41/383 (10%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKS-VLCTALSSCAKARNWHLGLQIHAYLV 114
N ++ K + +A DL MNR+ S L T LSSC + G ++H +
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAI 312
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLI-------------- 160
R G L +++AL+ FY+K + + ++ M D V++T +I
Sbjct: 313 RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVE 372
Query: 161 -----------------AGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC--VGQ 201
AGF NG G A LF +ML ++ F+LTS + AC V +
Sbjct: 373 IFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSE 432
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE--TSEKDTIVYN 259
K + +H +K G + + +L+D C+++ D+ + ++ ++ +
Sbjct: 433 KKVSEQ---IHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATT 489
Query: 260 SMISAYSQNLCSGDALQLFVE-MRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK 318
S+I Y++N A+ LF + ++K + +L IL C +L G Q+H +K
Sbjct: 490 SIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALK 549
Query: 319 MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
G ++ + ++L+ MY+K D D+A + + + + W ++I Y G EAL L
Sbjct: 550 AGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALAL 609
Query: 379 FDRLLTERELTPDHIYFTAILTA 401
+ R + E+E+ PD I T +++A
Sbjct: 610 WSR-MNEKEIKPDIITLTLVISA 631
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 150/297 (50%), Gaps = 15/297 (5%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E+ L +AL+ Y K +A VF ++ VS+T+LI+GFS +A +F
Sbjct: 111 EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFR 170
Query: 179 MLGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA-- 235
M ++PN +T ++++ACV + +H +VK GF S FV SL+ Y
Sbjct: 171 MRKAGLVQPNEYTFVAILTACV-RVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKD 229
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLC 294
+ DD L L +E ++D +N+++S+ + S A LF EM R + F TL
Sbjct: 230 SGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLS 289
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
T+L++C+ + L+ GR++H I++G + + V +AL+ YSK D+ + + + +
Sbjct: 290 TLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ 349
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ V +T MI Y G A+E+F +TE+ + I + A++ AGF G
Sbjct: 350 DAVTFTEMITAYMSFGMVDSAVEIFAN-VTEK----NTITYNALM-----AGFCRNG 396
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 164/326 (50%), Gaps = 35/326 (10%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E+++ + ++ +AK + +ARK F M VSW ++++G++ NG DA LF +
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
ML ++PN T VISAC + D +L + ++ R + FV +L+D +A C+
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADP-SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 239 QIDDSLLLLNE-TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF----------- 286
I + + NE ++++ + +N+MIS Y++ A QLF M ++
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 287 ---------------------SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNV 325
P + T+ ++L+AC +A L G + + K + N
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLND 433
Query: 326 FVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTE 385
+L+ MY++GG++ EA+ V D+ ++ V + T+ +A +G G+E L L ++ E
Sbjct: 434 SGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDE 493
Query: 386 RELTPDHIYFTAILTACNHAGFLEKG 411
+ PD + +T++LTACN AG L++G
Sbjct: 494 -GIEPDRVTYTSVLTACNRAGLLKEG 518
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N ++ +++N T+ AL L M RL +P+++ +S+C+ + L + +
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFR----------------------------- 146
N F+ +AL+D +AKC I AR++F
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 147 ---AMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG-THIKPNCFTLTSVISACVGQK 202
M + VSW SLIAG++ NGQ A F++M+ KP+ T+ SV+SAC G
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC-GHM 411
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
L+ + ++ K + ++ SL+ YA + ++ + +E E+D + YN++
Sbjct: 412 ADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLF 471
Query: 263 SAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV 312
+A++ N + L L +M+ + P T ++L AC+ L EG+++
Sbjct: 472 TAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 191 LTSVISACVGQKDALQHCSTLHAH-VVKRGFRTSNFVICSLVDCYANCKQIDD----SLL 245
LT ++A Q + +HA +V ++ ++ C C ++ + L
Sbjct: 5 LTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISC---CTRLRAPSYYTRL 61
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
+ + + + V NSM +S+ + D L+L+ + + P + ++ +
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 306 LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMG 365
L + +LV K+G ++ +V + ++DMY K ++ AR V DQ S + W MI G
Sbjct: 122 LFQ-----ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
Y + G EA +LFD ++ E D + +T ++T LE
Sbjct: 177 YWKWGNKEEACKLFD-MMPEN----DVVSWTVMITGFAKVKDLENA 217
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 153/336 (45%), Gaps = 33/336 (9%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
QIH +++ ++ L L+ + A VF ++ +W +I S N
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 168 QGRDAFLLFKEMLGTHIKP-NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFV 226
+ R+A LLF M+ +H + FT VI AC+ +++ + +H +K GF F
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLA-SSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 227 ICSLVDCYANC-------------------------------KQIDDSLLLLNETSEKDT 255
+L+D Y C Q+D + ++ N+ ++
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 256 IVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSL 315
+ + +MI+AY +N +A QLF M+ P + T+ +L A + L SL GR VH
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 316 VIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEA 375
K G + F+ +AL+DMYSK G + +AR V D K+ W +MI G G EA
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 376 LELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
L LF+ + E + PD I F +L+AC + G ++ G
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 122/258 (47%), Gaps = 33/258 (12%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK---------- 143
+ +C + + LG Q+H +++G+ +++F + L+D Y KC RK
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 144 ---------------------VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
VF M + + VSWT++I + N + +AF LF+ M
Sbjct: 186 VSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD 245
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
+KPN FT+ +++ A Q +L +H + K GF F+ +L+D Y+ C + D
Sbjct: 246 DVKPNEFTIVNLLQAST-QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQD 304
Query: 243 SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK-KFSPTDHTLCTILNACS 301
+ + + K +NSMI++ + C +AL LF EM ++ P T +L+AC+
Sbjct: 305 ARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
Query: 302 SLASLIEGRQVHSLVIKM 319
+ ++ +G + + +I++
Sbjct: 365 NTGNVKDGLRYFTRMIQV 382
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
IT + KN D A L M KP++ + L + + + +G +H Y ++G+
Sbjct: 223 ITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGF 282
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLF-K 177
+ FL +AL+D Y+KC ++ DARKVF M+ +W S+I +G G +A LF +
Sbjct: 283 VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEE 342
Query: 178 EMLGTHIKPNCFTLTSVISACVGQ---KDALQHCSTL 211
++P+ T V+SAC KD L++ + +
Sbjct: 343 MEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 150/303 (49%), Gaps = 43/303 (14%)
Query: 110 HAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQG 169
H R + N+ ++++ Y K +V AR +F MK D +SW ++I G+ +
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 170 RDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS 229
DAF LF EM PN +DA H +
Sbjct: 329 EDAFALFSEM------PN--------------RDA--HSWNM------------------ 348
Query: 230 LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
+V YA+ ++ + +T EK T+ +NS+I+AY +N +A+ LF+ M + P
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
HTL ++L+A + L +L G Q+H +V+K +V V +AL+ MYS+ G+I E+R + D
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFD 467
Query: 350 QTSVKNNVL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
+ +K V+ W MI GYA G EAL LF + + + P HI F ++L AC HAG +
Sbjct: 468 EMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSN-GIYPSHITFVSVLNACAHAGLV 526
Query: 409 EKG 411
++
Sbjct: 527 DEA 529
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 8/230 (3%)
Query: 40 LCRQFFIKKFSGKTFE-NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCA 98
L R +F K T N I + KN A+DL MN KP L + LS+
Sbjct: 361 LARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Query: 99 KARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQV-SWT 157
N LG+Q+H +V++ D + + +AL+ Y++C I+++R++F MK+ +V +W
Sbjct: 421 GLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWN 479
Query: 158 SLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC--VGQKDALQHCSTLHAHV 215
++I G++ +G +A LF M I P+ T SV++AC G D + V
Sbjct: 480 AMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSV 539
Query: 216 VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS-EKDTIVYNSMISA 264
K + ++ SLV+ + Q ++++ ++ E D V+ +++ A
Sbjct: 540 YKIEPQMEHY--SSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDA 587
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 8/264 (3%)
Query: 128 LVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPN 187
+V YA + AR F VSW S+IA + N ++A LF M KP+
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 188 CFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLL 247
TLTS++SA G + L+ +H VVK V +L+ Y+ C +I +S +
Sbjct: 409 PHTLTSLLSASTGLVN-LRLGMQMHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIF 466
Query: 248 NETS-EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASL 306
+E +++ I +N+MI Y+ + + +AL LF M+ P+ T ++LNAC+ +
Sbjct: 467 DEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLV 526
Query: 307 IEGR-QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMIM 364
E + Q S++ E + S+LV++ S G +EA +++ + + +W ++
Sbjct: 527 DEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLD 586
Query: 365 G---YAQSGRGLEALELFDRLLTE 385
Y G A E RL E
Sbjct: 587 ACRIYNNVGLAHVAAEAMSRLEPE 610
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 54/291 (18%)
Query: 138 IVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA 197
I +AR +F ++ + V+W ++I+G+ + A LF M K + T ++IS
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PKRDVVTWNTMISG 111
Query: 198 CV--GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDT 255
V G L+ L + R +F +++ YA ++I ++LLL + E++
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNA 167
Query: 256 IVYNSMISAYSQNLCSGDALQLFVEMRQKKFSP---------TDHTLCTILNACSSLASL 306
+ +++MI+ + QN A+ LF +M K SP + L SL
Sbjct: 168 VSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSL 227
Query: 307 IEGRQ-----VHSLVIKMGSE------------------------------RNVFVASAL 331
+ GR+ ++L++ G +NV +++
Sbjct: 228 VSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287
Query: 332 VDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ Y K GD+ AR + DQ ++ + W TMI GY R +A LF +
Sbjct: 288 IKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 219 GFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF 278
GFR +N + ++ I ++ + + ++T+ +N+MIS Y + A +LF
Sbjct: 39 GFRATNKELNQMI----RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLF 94
Query: 279 VEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKG 338
++ K+ T +T+ + +C + L E R+ L +M S R+ F + ++ Y+K
Sbjct: 95 -DVMPKRDVVTWNTMISGYVSCGGIRFLEEARK---LFDEMPS-RDSFSWNTMISGYAKN 149
Query: 339 GDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
I EA + ++ +N V W+ MI G+ Q+G A+ LF ++
Sbjct: 150 RRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 176/386 (45%), Gaps = 35/386 (9%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I HS +AL LL M K L L +C++ G+QIH +L +
Sbjct: 90 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 149
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+G +LFL + L+ Y KC + +R++F M D VS+ S+I G+ G A L
Sbjct: 150 TGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAREL 209
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI-------- 227
F +++ +K N + S+IS D + S L A + ++ + N +I
Sbjct: 210 F-DLMPMEMK-NLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGR 267
Query: 228 -------------------CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQN 268
+++D YA + + L ++ +D + YNSM++ Y QN
Sbjct: 268 IEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQN 327
Query: 269 LCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
+AL++F +M ++ P D TL +L A + L L + +H +++ +
Sbjct: 328 KYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKL 387
Query: 328 ASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLL-TER 386
AL+DMYSK G I A V + K+ W MI G A G G A FD LL ER
Sbjct: 388 GVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESA---FDMLLQIER 444
Query: 387 -ELTPDHIYFTAILTACNHAGFLEKG 411
L PD I F +L AC+H+G +++G
Sbjct: 445 LSLKPDDITFVGVLNACSHSGLVKEG 470
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 141/340 (41%), Gaps = 38/340 (11%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYA---KCFAIVDARKVFRAM--------KVHDQVSW 156
QIH L+++G N L++ +V +A + + AR VF +V D W
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 89
Query: 157 TSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVV 216
++I S R A LL ML + + F+L+ V+ AC + ++ +H +
Sbjct: 90 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKAC-SRLGFVKGGMQIHGFLK 148
Query: 217 KRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQ 276
K G + F+ L+ Y C + S + + ++D++ YNSMI Y + A +
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 277 LF--VEMRQKKFSPTDHTLCTILNACS------------------SLASLIEGRQVHSLV 316
LF + M K + + S S+I+G H +
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 268
Query: 317 ------IKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSG 370
+ R+V + ++D Y+K G + A+ + DQ ++ V + +M+ GY Q+
Sbjct: 269 EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 328
Query: 371 RGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
+EALE+F + E L PD +L A G L K
Sbjct: 329 YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 368
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 165/339 (48%), Gaps = 11/339 (3%)
Query: 74 LLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYA 133
L+ M A+P + + C+ +G +H ++R G++ ++ + ++ VDFY
Sbjct: 97 LMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYG 156
Query: 134 KCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTS 193
KC + ARKVF M + VSWT+L+ + +G+ +A K M + N + +
Sbjct: 157 KCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEA----KSMFDLMPERNLGSWNA 212
Query: 194 VISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK 253
++ V D L + L + KR + S++D YA + + L E
Sbjct: 213 LVDGLVKSGD-LVNAKKLFDEMPKRDIISYT----SMIDGYAKGGDMVSARDLFEEARGV 267
Query: 254 DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVH 313
D ++++I Y+QN +A ++F EM K P + + +++ACS + +V
Sbjct: 268 DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVD 327
Query: 314 S-LVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRG 372
S L +M + +V AL+DM +K G +D A + ++ ++ V + +M+ G A G G
Sbjct: 328 SYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCG 387
Query: 373 LEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
EA+ LF++++ E + PD + FT IL C + +E+G
Sbjct: 388 SEAIRLFEKMVDE-GIVPDEVAFTVILKVCGQSRLVEEG 425
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 138/268 (51%), Gaps = 11/268 (4%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
++++D YAK +V AR +F + D +W++LI G++ NGQ +AF +F EM ++K
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFR-TSNFVICSLVDCYANCKQIDDSL 244
P+ F + ++SAC Q + C + +++ +R + +S++V+ +L+D A C +D +
Sbjct: 302 PDEFIMVGLMSAC-SQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAA 360
Query: 245 LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
L E ++D + Y SM+ + + C +A++LF +M + P + IL C
Sbjct: 361 KLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 305 SLIEGRQVHSLVIKMGSERNVFVA----SALVDMYSKGGDIDEARFVLDQTSVKNNV-LW 359
+ EG + L M + ++ + S +V++ S+ G + EA ++ + + W
Sbjct: 421 LVEEGLRYFEL---MRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAW 477
Query: 360 TTMIMGYAQSGRGLEALELFDRLLTERE 387
+++ G + G E E+ R L E E
Sbjct: 478 GSLLGGCSLHG-NTEIAEVVARHLFELE 504
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 146/310 (47%), Gaps = 24/310 (7%)
Query: 108 QIHAYLVRSGYE-DNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSAN 166
QIHA ++R G E D +S + + ++ + VF + W LI G+S
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYS-- 85
Query: 167 GQGRDAFLLFK------EMLGTHI-KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG 219
+ FL F+ M+ T + +P+ +T V+ C ++ S++H V++ G
Sbjct: 86 ----NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVC-SNNGQVRVGSSVHGLVLRIG 140
Query: 220 FRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFV 279
F V S VD Y CK + + + E E++ + + +++ AY ++ +A +F
Sbjct: 141 FDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFD 200
Query: 280 EMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGG 339
M ++ + +++ L+ +++ + K R++ ++++D Y+KGG
Sbjct: 201 LMPERNLGSWN----ALVDGLVKSGDLVNAKKLFDEMPK----RDIISYTSMIDGYAKGG 252
Query: 340 DIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAIL 399
D+ AR + ++ + W+ +I+GYAQ+G+ EA ++F + + + PD ++
Sbjct: 253 DMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCA-KNVKPDEFIMVGLM 311
Query: 400 TACNHAGFLE 409
+AC+ G E
Sbjct: 312 SACSQMGCFE 321
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF-RTSNFVICSLVDCYANCKQIDDSL 244
P+ +L ++ C + H + +HA ++++G + N + + ++ + S
Sbjct: 8 PSLLSLETLFKLCKSE----IHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSS 63
Query: 245 LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS-PTDHTLCTILNACSSL 303
+ T ++N +I YS + + + + M + + P ++T ++ CS+
Sbjct: 64 SVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNN 123
Query: 304 ASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMI 363
+ G VH LV+++G +++V V ++ VD Y K D+ AR V + +N V WT ++
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 364 MGYAQSGRGLEALELFDRLLTEREL 388
+ Y +SG EA +FD L+ ER L
Sbjct: 184 VAYVKSGELEEAKSMFD-LMPERNL 207
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYL-VRSG 117
I +++N + A + + M KP + ++ +S+C++ + L ++ +YL R
Sbjct: 276 ILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMN 335
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
+ ++ AL+D AKC + A K+F M D VS+ S++ G + +G G +A LF+
Sbjct: 336 KFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFE 395
Query: 178 EMLGTHIKPNCFTLTSVISACVGQ 201
+M+ I P+ T ++ C GQ
Sbjct: 396 KMVDEGIVPDEVAFTVILKVC-GQ 418
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 157/349 (44%), Gaps = 7/349 (2%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I +S+N A L M + PS + L L C + G +H +
Sbjct: 120 NALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAK 179
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
SG E + + +AL+ FY+KC + A +FR MK VSW ++I +S +G +A +
Sbjct: 180 SGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITV 239
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
FK M +++ + T+ +++SA V + LH VVK G V+ SLV Y+
Sbjct: 240 FKNMFEKNVEISPVTIINLLSAHVSHEP-------LHCLVVKCGMVNDISVVTSLVCAYS 292
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
C + + L + + S++S Y++ A+ F + RQ L
Sbjct: 293 RCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVG 352
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
IL+ C + + G +H IK G V + L+ MYSK D++ F+ +Q
Sbjct: 353 ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP 412
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
+ W ++I G QSGR A E+F +++ L PD I ++L C+
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQ 461
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 171/358 (47%), Gaps = 11/358 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQ-IHAYLV 114
N I +S++ + A+ + M + S + LS+ H+ + +H +V
Sbjct: 221 NTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA-------HVSHEPLHCLVV 273
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+ G +++ + ++LV Y++C +V A +++ + K V TS+++ ++ G A +
Sbjct: 274 KCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVV 333
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
F + +K + L ++ C + + +LH + +K G T V+ L+ Y
Sbjct: 334 YFSKTRQLCMKIDAVALVGILHGC-KKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMY 392
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMR-QKKFSPTDHTL 293
+ ++ L L + E I +NS+IS Q+ + A ++F +M P T+
Sbjct: 393 SKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITI 452
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
++L CS L L G+++H ++ E FV +AL+DMY+K G+ +A V
Sbjct: 453 ASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKA 512
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W +MI GY+ SG AL + + E+ L PD I F +L+ACNH GF+++G
Sbjct: 513 PCTATWNSMISGYSLSGLQHRALSCYLE-MREKGLKPDEITFLGVLSACNHGGFVDEG 569
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 117/218 (53%), Gaps = 2/218 (0%)
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQ-HCSTLHAHVVKRGFRTSNFVICSLVDC 233
+F+++L + + PN FT++ + A ++ + + H+ K G +V SL++
Sbjct: 35 IFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNL 94
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y + + +L +E E+DT+V+N++I YS+N DA +LF+ M Q+ FSP+ TL
Sbjct: 95 YLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTL 154
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
+L C + +GR VH + K G E + V +AL+ YSK ++ A + +
Sbjct: 155 VNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD 214
Query: 354 KNNVLWTTMIMGYAQSGRGLEALELFDRLLTER-ELTP 390
K+ V W TMI Y+QSG EA+ +F + + E++P
Sbjct: 215 KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISP 252
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 152/308 (49%), Gaps = 16/308 (5%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
Q+ +L +SG + +++ ++L++ Y K + A+ +F M D V W +LI G+S NG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
DA+ LF ML P+ TL +++ C GQ + ++H K G + V
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFC-GQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK--K 285
+L+ Y+ C ++ + +L E +K T+ +N+MI AYSQ+ +A+ +F M +K +
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
SP TI+N L++ + +H LV+K G ++ V ++LV YS+ G + A
Sbjct: 250 ISPV-----TIINL---LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 346 FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTEREL--TPDHIYFTAILTACN 403
+ + V T+++ YA+ G A+ F + R+L D + IL C
Sbjct: 302 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK---TRQLCMKIDAVALVGILHGCK 358
Query: 404 HAGFLEKG 411
+ ++ G
Sbjct: 359 KSSHIDIG 366
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 145/308 (47%), Gaps = 4/308 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
++ +++ D A+ + +L K L L C K+ + +G+ +H Y ++SG
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL 378
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ + L+ Y+K + +F ++ +SW S+I+G +G+ AF +F +
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQ 438
Query: 179 MLGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
M+ T + P+ T+ S+++ C Q L LH + ++ F NFV +L+D YA C
Sbjct: 439 MMLTGGLLPDAITIASLLAGC-SQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKC 497
Query: 238 KQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+ + T +NSMIS YS + AL ++EMR+K P + T +L
Sbjct: 498 GNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVL 557
Query: 298 NACSSLASLIEGRQVHSLVIK-MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK-N 355
+AC+ + EG+ +IK G + + +V + + EA +++ + +K +
Sbjct: 558 SACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPD 617
Query: 356 NVLWTTMI 363
+ +W ++
Sbjct: 618 SAVWGALL 625
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 153/293 (52%), Gaps = 41/293 (13%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E N+ + ++ Y + + ARK+F M +VSWTS++ G++ +G+ DA F+
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV 259
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M +KP + AC +++ +
Sbjct: 260 M---PMKP--------VIAC-----------------------------NAMIVGFGEVG 279
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+I + + + ++D + MI AY + +AL LF +M+++ P+ +L +IL+
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
C++LASL GRQVH+ +++ + +V+VAS L+ MY K G++ +A+ V D+ S K+ ++
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIM 399
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W ++I GYA G G EAL++F + + + P+ + AILTAC++AG LE+G
Sbjct: 400 WNSIISGYASHGLGEEALKIFHEMPSSGTM-PNKVTLIAILTACSYAGKLEEG 451
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 139/279 (49%), Gaps = 4/279 (1%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
+A++ + + I AR+VF M+ D +W +I + G +A LF +M ++
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL 245
P+ +L S++S C +LQ+ +HAH+V+ F +V L+ Y C ++ + L
Sbjct: 329 PSFPSLISILSVCATLA-SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
+ + S KD I++NS+IS Y+ + +AL++F EM P TL IL ACS
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 306 LIEGRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIM 364
L EG ++ S+ K V S VDM + G +D+A +++ ++K + ++
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Query: 365 GYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
G ++ L+ E+ + L E E PD+ +L++ N
Sbjct: 508 GACKTHSRLDLAEVAAKKLFENE--PDNAGTYVLLSSIN 544
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I + + ALDL M + +PS L + LS CA + G Q+HA+LVR +
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+D+++++S L+ Y KC +V A+ VF D + W S+I+G++++G G +A +F E
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 179 MLGTHIKPNCFTLTSVISAC--VGQ-KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
M + PN TL ++++AC G+ ++ L+ ++ + T C+ VD
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTP--TVEHYSCT-VDMLG 479
Query: 236 NCKQIDDSLLLLNE-TSEKDTIVYNSMISA 264
Q+D ++ L+ T + D V+ +++ A
Sbjct: 480 RAGQVDKAMELIESMTIKPDATVWGALLGA 509
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 53/272 (19%)
Query: 138 IVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA 197
I +ARK F +++ SW S+++G+ +NG ++A LF EM
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM------------------ 74
Query: 198 CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIV 257
+R + N LV Y + I ++ + E++ +
Sbjct: 75 ------------------SERNVVSWN----GLVSGYIKNRMIVEARNVFELMPERNVVS 112
Query: 258 YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI 317
+ +M+ Y Q G+A LF M ++ + + + + + R+++ ++
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMM- 167
Query: 318 KMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALE 377
++V ++ ++ + G +DEAR + D+ +N V WTTMI GY Q+ R A +
Sbjct: 168 ---PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARK 224
Query: 378 LFDRLLTERELTPDHIYFTAILTACNHAGFLE 409
LF+ + + E++ +T++L +G +E
Sbjct: 225 LFEVMPEKTEVS-----WTSMLLGYTLSGRIE 251
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
Query: 215 VVKRGFRTSNFVICSL-VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
+++R + TS V CS + + +I+++ + K +NS++S Y N +
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 274 ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVD 333
A QLF EM ++ + + + ++E R V L+ ERNV +A+V
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKN----RMIVEARNVFELM----PERNVVSWTAMVK 118
Query: 334 MYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
Y + G + EA + + +N V WT M G GR +A +L+D +
Sbjct: 119 GYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM 167
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 190/427 (44%), Gaps = 84/427 (19%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLG-----LQIHAYL 113
I +++N A++L M L ++ L T +S+C+ HLG + +
Sbjct: 145 IKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACS-----HLGGIWDCRMLQSLA 199
Query: 114 VRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG------ 167
++ E +F+S+ L+ Y C + DARK+F M + V+W ++ G+S G
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAE 259
Query: 168 -------------------------QGRDAFLLFKEMLGTHIKPNCFTLTSVISAC---V 199
Q +A + + EML +KP+ + ++SA V
Sbjct: 260 ELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSV 319
Query: 200 GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL-------------- 245
G LQ LH +VKRGF +F+ +++ YA I +L
Sbjct: 320 GSSKGLQ----LHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRN 375
Query: 246 -----------------LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFS 287
+ ++T +KD +N+MIS Y+Q+L AL LF EM +
Sbjct: 376 ALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVK 435
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P T+ ++ +A SSL SL EG++ H + N + +A++DMY+K G I+ A +
Sbjct: 436 PDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNI 495
Query: 348 LDQT-SVKNNVL--WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
QT ++ ++ + W +I G A G AL+L+ L + + P+ I F +L+AC H
Sbjct: 496 FHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS-LPIKPNSITFVGVLSACCH 554
Query: 405 AGFLEKG 411
AG +E G
Sbjct: 555 AGLVELG 561
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 182/419 (43%), Gaps = 94/419 (22%)
Query: 86 SKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVF 145
++ L +AL SCA + + G QIH +++SG + N ++ +++++ YAKC + DA VF
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 146 R-------------------------AMKVHDQ------VSWTSLIAGFSANGQGRDAFL 174
R A+K+ D VS+T+LI G++ N Q +A
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
LF+EM I N TL +VISAC + C L + +K FV +L+ Y
Sbjct: 160 LFREMRNLGIMLNEVTLATVISAC-SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 235 ANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQ-----------------------NLCS 271
C + D+ L +E E++ + +N M++ YS+ +
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 272 G--------DALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
G +AL + EM + P++ + +L+A + +G Q+H ++K G +
Sbjct: 279 GCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDC 338
Query: 324 NVFVASALVDMYS-------------------------------KGGDIDEARFVLDQTS 352
F+ + ++ Y+ K G +++AR V DQT
Sbjct: 339 YDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTH 398
Query: 353 VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
K+ W MI GYAQS AL LF +++ ++ PD I ++ +A + G LE+G
Sbjct: 399 DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 168/366 (45%), Gaps = 51/366 (13%)
Query: 50 SGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQI 109
S T + C+ K+ D AL T M R KPS+ ++ LS+ A++ GLQ+
Sbjct: 272 SWGTMIDGCLRKNQ----LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQL 327
Query: 110 HAYLVRSGYEDNLFLSSALVDFYA-------------------------------KCFAI 138
H +V+ G++ FL + ++ FYA K +
Sbjct: 328 HGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMV 387
Query: 139 VDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT-HIKPNCFTLTSVISA 197
AR+VF D SW ++I+G++ + + A LF+EM+ + +KP+ T+ SV SA
Sbjct: 388 EQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSA 447
Query: 198 CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIV 257
+ +L+ H ++ ++ + +++D YA C I+ +L + ++T +
Sbjct: 448 -ISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKN----I 502
Query: 258 YNSMISAYSQNLCSGD-------ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGR 310
+S IS ++ +C AL L+ +++ P T +L+AC A L+E
Sbjct: 503 SSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCH-AGLVELG 561
Query: 311 QVH--SLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQ 368
+ + S+ G E ++ +VD+ K G ++EA+ ++ + VK +V+ M++ ++
Sbjct: 562 KTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASR 621
Query: 369 SGRGLE 374
+ +E
Sbjct: 622 THGNVE 627
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 32/151 (21%)
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK--------- 337
S T+ L + L +C+S + GRQ+H V+K G + N ++ +++++MY+K
Sbjct: 38 SDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAES 97
Query: 338 ----GGDIDEARF-VLDQTSVKNNVLW-----------------TTMIMGYAQSGRGLEA 375
+D A F ++ V++ LW TT+I GYAQ+ + EA
Sbjct: 98 VFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA 157
Query: 376 LELFDRLLTERELTPDHIYFTAILTACNHAG 406
+ELF R + + + + +++AC+H G
Sbjct: 158 MELF-REMRNLGIMLNEVTLATVISACSHLG 187
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 121/231 (52%), Gaps = 4/231 (1%)
Query: 181 GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
G ++P + + ++ C Q+ +HA + GF + ++ L+ YA +
Sbjct: 103 GLQVEPETYAV--LLQEC-KQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDL 159
Query: 241 DDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
+ +L +D I +N+MIS Y Q + L ++ +MRQ + P +T ++ AC
Sbjct: 160 QTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRAC 219
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWT 360
S+L L G++ H+++IK + N+ V SALVDMY K + V DQ S +N + WT
Sbjct: 220 SALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWT 279
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++I GY G+ E L+ F++ + E P+ + F +LTACNH G ++KG
Sbjct: 280 SLISGYGYHGKVSEVLKCFEK-MKEEGCRPNPVTFLVVLTACNHGGLVDKG 329
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 148/314 (47%), Gaps = 11/314 (3%)
Query: 52 KTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHA 111
KT + C+T K A + LL + +VL L C + + + G +IHA
Sbjct: 81 KTLKGLCVTGRLKEA-----VGLLWSSGLQVEPETYAVL---LQECKQRKEYTKGKRIHA 132
Query: 112 YLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRD 171
+ G+ N +L L+ YA + A +FR++K+ D + W ++I+G+ G ++
Sbjct: 133 QMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQE 192
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
++ +M I P+ +T SV AC D L+H HA ++KR +++ V +LV
Sbjct: 193 GLFIYYDMRQNRIVPDQYTFASVFRACSAL-DRLEHGKRAHAVMIKRCIKSNIIVDSALV 251
Query: 232 DCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
D Y C D + ++ S ++ I + S+IS Y + + L+ F +M+++ P
Sbjct: 252 DMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPV 311
Query: 292 TLCTILNACSSLASLIEG-RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA-RFVLD 349
T +L AC+ + +G +S+ G E +A+VD + G + EA FV+
Sbjct: 312 TFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMK 371
Query: 350 QTSVKNNVLWTTMI 363
++ +W +++
Sbjct: 372 SPCKEHPPVWGSLL 385
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 174/362 (48%), Gaps = 18/362 (4%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I H++N+ +A + + M R L +C+ + +H ++ +
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 116 SGYEDNLFLSSALVDFYAKC--FAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
G ++++ +AL+D Y++C + DA K+F M D VSW S++ G G+ RDA
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA--HVVKRGFRTSNFVICSLV 231
LF EM + + + +++ D C + + ++ + ++V
Sbjct: 206 RLFDEM----PQRDLISWNTML-------DGYARCREMSKAFELFEKMPERNTVSWSTMV 254
Query: 232 DCYANCKQIDDSLLLLNETS--EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
Y+ ++ + ++ ++ K+ + + +I+ Y++ +A +L +M
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
+ +IL AC+ L G ++HS++ + N +V +AL+DMY+K G++ +A V +
Sbjct: 315 AAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 374
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLE 409
K+ V W TM+ G G G EA+ELF R+ E + PD + F A+L +CNHAG ++
Sbjct: 375 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE-GIRPDKVTFIAVLCSCNHAGLID 433
Query: 410 KG 411
+G
Sbjct: 434 EG 435
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 157/330 (47%), Gaps = 14/330 (4%)
Query: 86 SKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVF 145
S+ + L K N + Q+HA ++R ++L ++ L+ + C A +VF
Sbjct: 15 SRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVF 74
Query: 146 RAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDAL 205
++ + SLI + N Q AF +F EM + + FT ++ AC GQ L
Sbjct: 75 NQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQS-WL 133
Query: 206 QHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK--QIDDSLLLLNETSEKDTIVYNSMIS 263
+H H+ K G + +V +L+DCY+ C + D++ L + SE+DT+ +NSM+
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLG 193
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
+ DA +LF EM Q+ + +T+ C ++ E L KM ER
Sbjct: 194 GLVKAGELRDARRLFDEMPQRDLI-SWNTMLDGYARCREMSKAFE------LFEKM-PER 245
Query: 324 NVFVASALVDMYSKGGDIDEARFVLDQTSV--KNNVLWTTMIMGYAQSGRGLEALELFDR 381
N S +V YSK GD++ AR + D+ + KN V WT +I GYA+ G EA L D+
Sbjct: 246 NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 382 LLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ L D +IL AC +G L G
Sbjct: 306 MVAS-GLKFDAAAVISILAACTESGLLSLG 334
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 149/328 (45%), Gaps = 23/328 (7%)
Query: 48 KFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLC--TALSSCAKARNWHL 105
K K E D ++ +S +A +L P + ++ T L A+ R
Sbjct: 175 KLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSK 234
Query: 106 GLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKV--HDQVSWTSLIAGF 163
++ + E N S +V Y+K + AR +F M + + V+WT +IAG+
Sbjct: 235 AFELFEKMP----ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGY 290
Query: 164 SANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTS 223
+ G ++A L +M+ + +K + + S+++AC + L +H+ + + ++
Sbjct: 291 AEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT-ESGLLSLGMRIHSILKRSNLGSN 349
Query: 224 NFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQ 283
+V+ +L+D YA C + + + N+ +KD + +N+M+ + +A++LF MR+
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 284 KKFSPTDHTLCTILNACSSLASLIEG-------RQVHSLVIKMGSERNVFVASALVDMYS 336
+ P T +L +C+ + EG +V+ LV + V LVD+
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQ------VEHYGCLVDLLG 463
Query: 337 KGGDIDEARFVLDQTSVKNN-VLWTTMI 363
+ G + EA V+ ++ N V+W ++
Sbjct: 464 RVGRLKEAIKVVQTMPMEPNVVIWGALL 491
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 168/342 (49%), Gaps = 4/342 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N+ + + ++ S A+ + GM R T P + L + + + ++ LG ++H+ VR
Sbjct: 86 NNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVR 145
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G+ + F S + Y K +ARKVF SW ++I G + G+ +A +
Sbjct: 146 LGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEM 205
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVV--KRGFRTSNFVICSLVDC 233
F +M + ++P+ FT+ SV ++C G D L LH V+ K ++ ++ SL+D
Sbjct: 206 FVDMKRSGLEPDDFTMVSVTASCGGLGD-LSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y C ++D + + E +++ + ++SMI Y+ N + +AL+ F +MR+ P T
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 294 CTILNACSSLASLIEGRQVHSLVI-KMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
+L+AC + EG+ +++ + E + +VD+ S+ G + EA+ V+++
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 353 VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIY 394
+K NV+ +MG + +E E + E E D +Y
Sbjct: 385 MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVY 426
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 151/294 (51%), Gaps = 13/294 (4%)
Query: 128 LVDFYAKCFAIVDARKV----FRAMKVHDQVS----WTSLIAGFSANGQGRDAFLLFKEM 179
L + C ++ R++ FR+ ++ DQ W +++ + + DA ++ M
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRS-RILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGM 108
Query: 180 LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQ 239
+ + + P+ ++L VI A V D LH+ V+ GF F + Y +
Sbjct: 109 VRSTVLPDRYSLPIVIKAAVQIHD-FTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGE 167
Query: 240 IDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNA 299
+++ + +E E+ +N++I + + +A+++FV+M++ P D T+ ++ +
Sbjct: 168 FENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTAS 227
Query: 300 CSSLASLIEGRQVHSLVIKMGSER--NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
C L L Q+H V++ +E ++ + ++L+DMY K G +D A + ++ +N V
Sbjct: 228 CGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV 287
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W++MI+GYA +G LEALE F R + E + P+ I F +L+AC H G +E+G
Sbjct: 288 SWSSMIVGYAANGNTLEALECF-RQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 158/308 (51%), Gaps = 6/308 (1%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCF--AIVDARKVFRAMKVHDQVS-WTSLIAGFS 164
+IH++++ +G + + + + L+ F A ++ A+ +F S W LI GFS
Sbjct: 23 KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFS 82
Query: 165 ANGQGRDAFLLFKEMLGTHI-KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTS 223
+ ++ L + ML + + +P+ FT + +C K ++ C +H V++ GF
Sbjct: 83 NSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIK-SIPKCLEIHGSVIRSGFLDD 141
Query: 224 NFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQ 283
V SLV CY+ ++ + + +E +D + +N MI +S AL ++ M
Sbjct: 142 AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN 201
Query: 284 KKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDE 343
+ +TL +L++C+ +++L G +H + + E VFV++AL+DMY+K G ++
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 344 ARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
A V + ++ + W +MI+GY G G+EA+ F R + + P+ I F +L C+
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFF-RKMVASGVRPNAITFLGLLLGCS 320
Query: 404 HAGFLEKG 411
H G +++G
Sbjct: 321 HQGLVKEG 328
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 160/331 (48%), Gaps = 12/331 (3%)
Query: 82 TAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDA 141
++P AL SC + ++ L+IH ++RSG+ D+ ++++LV Y+ ++ A
Sbjct: 102 VSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIA 161
Query: 142 RKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQ 201
KVF M V D VSW +I FS G A ++K M + + +TL +++S+C
Sbjct: 162 SKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSC-AH 220
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSM 261
AL LH + FV +L+D YA C +++++ + N ++D + +NSM
Sbjct: 221 VSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSM 280
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
I Y + +A+ F +M P T +L CS + EG + + M S
Sbjct: 281 IIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEI---MSS 337
Query: 322 E----RNVFVASALVDMYSKGGDIDEARFVLDQTSV-KNNVLWTTMIMGYAQSGRGLEAL 376
+ NV +VD+Y + G ++ + ++ +S ++ VLW T+ +G + R LE
Sbjct: 338 QFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTL-LGSCKIHRNLELG 396
Query: 377 ELFDRLLTEREL--TPDHIYFTAILTACNHA 405
E+ + L + E D++ T+I +A N A
Sbjct: 397 EVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 427
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 42/303 (13%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
++AL + M L LSSCA ++G+ +H E +F+S+AL
Sbjct: 190 NQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNAL 249
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
+D YAKC ++ +A VF M+ D ++W S+I G+ +G G +A F++M+ + ++PN
Sbjct: 250 IDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNA 309
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFV--ICSLVDCYANCKQIDDSLLL 246
T ++ C Q L H ++ F + V +VD Y Q+++SL +
Sbjct: 310 ITFLGLLLGCSHQ--GLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 367
Query: 247 LNETS-EKDTIVYNSMISA--YSQNLCSGD-ALQLFVEMRQKKFSPTDHTLCTIL----- 297
+ +S +D +++ +++ + +NL G+ A++ V++ + F+ D+ L T +
Sbjct: 368 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL--EAFNAGDYVLMTSIYSAAN 425
Query: 298 --NACSSLASLIE---------------GRQVHSLVI--KMGSERNVFVASALVDMYSKG 338
A +S+ LI G QVH V+ KM E V +YS+
Sbjct: 426 DAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAV--------IYSEL 477
Query: 339 GDI 341
G++
Sbjct: 478 GEV 480
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 148/292 (50%), Gaps = 4/292 (1%)
Query: 121 NLFLSSALVDFYAKCFAIVD-ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEM 179
N+ LSS LV Y+K + + VF M + SW +I FS +G + LF M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 180 LGTH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
++P+ FTL ++ AC ++A + +H +K GF +S FV +LV Y +
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREA-KSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
++ + L ++ +D+++Y +M Y Q + L +F EM F+ + ++L
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
AC L +L G+ VH I+ S + + +A+ DMY K +D A V S ++ +
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
W+++I+GY G + + +LFD +L E + P+ + F +L+AC H G +EK
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKE-GIEPNAVTFLGVLSACAHGGLVEK 354
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 28/327 (8%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLT-AKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I + S++ +++DL M R + +P L L +C+ +R G IH +
Sbjct: 102 NIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCL 161
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
+ G+ +LF+SSALV Y ++ ARK+F M V D V +T++ G+ G+
Sbjct: 162 KLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLA 221
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKR----GFRTSNFVICSL 230
+F+EM + + + S++ AC GQ AL+H ++H ++R G N ++
Sbjct: 222 MFREMGYSGFALDSVVMVSLLMAC-GQLGALKHGKSVHGWCIRRCSCLGLNLGN----AI 276
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD---ALQLFVEMRQKKFS 287
D Y C +D + + S +D I ++S+I Y + GD + +LF EM ++
Sbjct: 277 TDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLD---GDVVMSFKLFDEMLKEGIE 333
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVA----SALVDMYSKGGDIDE 343
P T +L+AC+ L+E ++ ++ E N+ +++ D S+ G ++E
Sbjct: 334 PNAVTFLGVLSACAH-GGLVEKSWLY---FRLMQEYNIVPELKHYASVADCMSRAGLLEE 389
Query: 344 ARFVLDQTSVKNNVLWTTMIMGYAQSG 370
A L+ VK + +MG SG
Sbjct: 390 AEKFLEDMPVKPD----EAVMGAVLSG 412
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 147/312 (47%), Gaps = 42/312 (13%)
Query: 101 RNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLI 160
R+ G Q+H ++ G E +LF+ + L+ Y C + ARKVF M
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH----------- 168
Query: 161 AGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF 220
+PN +VI+AC D + + ++ R
Sbjct: 169 ------------------------QPNLVAWNAVITACFRGND-VAGAREIFDKMLVRNH 203
Query: 221 RTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE 280
+ N ++ Y +++ + + +E +D + +++MI + N ++ F E
Sbjct: 204 TSWNVMLAG----YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRE 259
Query: 281 MRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGD 340
+++ SP + +L +L+ACS S G+ +H V K G V V +AL+DMYS+ G+
Sbjct: 260 LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGN 319
Query: 341 IDEARFVLDQTSVKNNVL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAIL 399
+ AR V + K ++ WT+MI G A G+G EA+ LF+ +T +TPD I F ++L
Sbjct: 320 VPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNE-MTAYGVTPDGISFISLL 378
Query: 400 TACNHAGFLEKG 411
AC+HAG +E+G
Sbjct: 379 HACSHAGLIEEG 390
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 12/283 (4%)
Query: 113 LVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDA 172
LVR+ N+ L+ Y K + A+++F M D VSW+++I G + NG ++
Sbjct: 199 LVRNHTSWNVMLAG-----YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNES 253
Query: 173 FLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD 232
FL F+E+ + PN +LT V+SAC Q + + LH V K G+ V +L+D
Sbjct: 254 FLYFRELQRAGMSPNEVSLTGVLSAC-SQSGSFEFGKILHGFVEKAGYSWIVSVNNALID 312
Query: 233 CYANCKQIDDSLLLLNETSEKDTIV-YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
Y+ C + + L+ EK IV + SMI+ + + +A++LF EM +P
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Query: 292 TLCTILNACSSLASLIEGRQVHSLVIKMGS-ERNVFVASALVDMYSKGGDIDEAR-FVLD 349
+ ++L+ACS + EG S + ++ E + +VD+Y + G + +A F+
Sbjct: 373 SFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQ 432
Query: 350 QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDH 392
++W T+ +G S +E E + L EL P++
Sbjct: 433 MPIPPTAIVWRTL-LGACSSHGNIELAEQVKQRLN--ELDPNN 472
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 147/344 (42%), Gaps = 52/344 (15%)
Query: 65 NASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFL 124
N S + + + R P++ L LS+C+++ ++ G +H ++ ++GY + +
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 125 SSALVDFYAKCFAIVDARKVFRAMKVHD-QVSWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
++AL+D Y++C + AR VF M+ VSWTS+IAG + +GQG +A LF EM
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 184 IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
+ P+ + S++ AC HA +++ G D ++ K++
Sbjct: 367 VTPDGISFISLLHACS------------HAGLIEEG-----------EDYFSEMKRV--- 400
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL 303
E + Y M+ Y + SG + + + Q PT T+L ACSS
Sbjct: 401 -----YHIEPEIEHYGCMVDLYGR---SGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH 452
Query: 304 ASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGG---DIDEARFVLDQTSVKNNVLWT 360
++ QV + ++ N L + Y+ G D+ R + +K W+
Sbjct: 453 GNIELAEQVKQRLNEL-DPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWS 511
Query: 361 TMIMGYA---------QSGRGLEA----LELFDRLLTERELTPD 391
+ +G + G +EA E+ RL E TP+
Sbjct: 512 LVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPE 555
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK-QIDDSL----LLLNETSEKDTIVYN 259
L+ + +H +K G T ++ L+ +C I D+L LL E D ++N
Sbjct: 18 LRALTQIHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLLLCFPEPDAFMFN 74
Query: 260 SMISAYSQNLCSGDALQLFVEMRQKKFS-PTDHTLCTILNACSSLASLIEGRQVHSLVIK 318
+++ YS++ +++ +FVEM +K F P + ++ A + SL G Q+H +K
Sbjct: 75 TLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALK 134
Query: 319 MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
G E ++FV + L+ MY G ++ AR V D+ N V W +I + A E+
Sbjct: 135 HGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREI 194
Query: 379 FDRLLTERELTPDHIYFTAILTACNHAGFLE 409
FD++L +H + +L AG LE
Sbjct: 195 FDKMLVR-----NHTSWNVMLAGYIKAGELE 220
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 11/294 (3%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E + F + ++ Y + A+ F M D SW ++I G++ G+ A LF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M+ + N + ++IS + D L+ S RG +++ Y K
Sbjct: 181 MM----EKNEVSWNAMISGYIECGD-LEKASHFFKVAPVRGV----VAWTAMITGYMKAK 231
Query: 239 QIDDSLLLLNE-TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+++ + + + T K+ + +N+MIS Y +N D L+LF M ++ P L + L
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
CS L++L GRQ+H +V K +V ++L+ MY K G++ +A + + K+ V
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W MI GYAQ G +AL LF R + + ++ PD I F A+L ACNHAG + G
Sbjct: 352 AWNAMISGYAQHGNADKALCLF-REMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 78/143 (54%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + +N+ + L L M +P+ S L +AL C++ LG QIH + +
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
S +++ ++L+ Y KC + DA K+F MK D V+W ++I+G++ +G A L
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 176 FKEMLGTHIKPNCFTLTSVISAC 198
F+EM+ I+P+ T +V+ AC
Sbjct: 373 FREMIDNKIRPDWITFVAVLLAC 395
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 34/265 (12%)
Query: 113 LVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSL------------- 159
L S E N +A++ Y +C + A F+ V V+WT++
Sbjct: 177 LFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELA 236
Query: 160 -------------------IAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVG 200
I+G+ N + D LF+ ML I+PN L+S + C
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC-S 295
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNS 260
+ ALQ +H V K + SL+ Y C ++ D+ L +KD + +N+
Sbjct: 296 ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNA 355
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQ-VHSLVIKM 319
MIS Y+Q+ + AL LF EM K P T +L AC+ + G S+V
Sbjct: 356 MISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDY 415
Query: 320 GSERNVFVASALVDMYSKGGDIDEA 344
E + +VD+ + G ++EA
Sbjct: 416 KVEPQPDHYTCMVDLLGRAGKLEEA 440
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 35/250 (14%)
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS--LVDCYANCKQIDDSLLL 246
F L +I+ CV D H G R N + + L+ + ++ ++ L
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFH------GMRAKNTITWNSLLIGISKDPSRMMEAHQL 115
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT-------ILNA 299
+E E DT YN M+S Y +N+ A F M K + + +T+ T + A
Sbjct: 116 FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKD-AASWNTMITGYARRGEMEKA 174
Query: 300 CSSLASLIEGRQVH-----------------SLVIKMGSERNVFVASALVDMYSKGGDID 342
S++E +V S K+ R V +A++ Y K ++
Sbjct: 175 RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 343 EARFVL-DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
A + D T KN V W MI GY ++ R + L+LF R + E + P+ ++ L
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF-RAMLEEGIRPNSSGLSSALLG 293
Query: 402 CNHAGFLEKG 411
C+ L+ G
Sbjct: 294 CSELSALQLG 303
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 164/329 (49%), Gaps = 19/329 (5%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
+S C +N QIHA ++ G + + S L+ + + A + R +
Sbjct: 16 ISKCKSLQNLK---QIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNPSV 71
Query: 154 VSWTSLIAGFSAN---GQGRDAFLLFKEMLGTH---IKPNCFTLTSVISACVGQKDALQH 207
+ +LI+ +N Q AF L+ ++L + ++PN FT S+ A +H
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 208 CSTLHAHVVK--RGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAY 265
LHAHV+K FV +LV YANC ++ ++ L E D +N++++AY
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 266 --SQNLCSGD-ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE 322
S+ + S + L LF+ M+ + P + +L ++ +C++L + G H V+K
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
N FV ++L+D+YSK G + AR V D+ S ++ + MI G A G G E +EL+ L
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 383 LTERELTPDHIYFTAILTACNHAGFLEKG 411
+++ L PD F ++AC+H+G +++G
Sbjct: 309 ISQ-GLVPDSATFVVTISACSHSGLVDEG 336
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 156/319 (48%), Gaps = 17/319 (5%)
Query: 103 WHL-GLQIHAYLVR--SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSL 159
WH G +HA++++ + F+ +ALV FYA C + +AR +F ++ D +W +L
Sbjct: 128 WHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTL 187
Query: 160 IAGFSANGQGRDA----FLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHV 215
+A + AN + D+ LLF M ++PN +L ++I +C + ++ H +V
Sbjct: 188 LAAY-ANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWA-HVYV 242
Query: 216 VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDAL 275
+K + FV SL+D Y+ C + + + +E S++D YN+MI + + + +
Sbjct: 243 LKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGI 302
Query: 276 QLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV-HSLVIKMGSERNVFVASALVDM 334
+L+ + + P T ++ACS + EG Q+ +S+ G E V LVD+
Sbjct: 303 ELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDL 362
Query: 335 YSKGGDIDEARFVLDQTSVKNN-VLWTTMIMGYAQSGRGLEALELFDRLL--TERELTPD 391
+ G ++EA + + VK N LW + +G +Q+ E E+ + L E E + +
Sbjct: 363 LGRSGRLEEAEECIKKMPVKPNATLWRSF-LGSSQTHGDFERGEIALKHLLGLEFENSGN 421
Query: 392 HIYFTAILTACNHAGFLEK 410
++ + I N +EK
Sbjct: 422 YVLLSNIYAGVNRWTDVEK 440
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + ++ + D ++L R+ +P++ L + SCA + G+ H Y+++
Sbjct: 185 NTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLK 244
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ N F+ ++L+D Y+KC + ARKVF M D + ++I G + +G G++ L
Sbjct: 245 NNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIEL 304
Query: 176 FKEMLGTHIKPNCFTLTSVISAC 198
+K ++ + P+ T ISAC
Sbjct: 305 YKSLISQGLVPDSATFVVTISAC 327
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 168/359 (46%), Gaps = 25/359 (6%)
Query: 56 NDCITKHSKNASTDRALDLLTGM--NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYL 113
N I+ S+N T +A +L + +K S S + L+SC + + G +H +L
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL 523
Query: 114 VRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
+ G + FL ++ + D SW S+I+G +++G ++
Sbjct: 524 QKLGDLTSAFL------------------RLETMSETRDLTSWNSVISGCASSGHHLESL 565
Query: 174 LLFKEM-LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD 232
F+ M I+ + TL ISA G + H +K + +L+
Sbjct: 566 RAFQAMSREGKIRHDLITLLGTISAS-GNLGLVLQGRCFHGLAIKSLRELDTQLQNTLIT 624
Query: 233 CYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
Y CK I+ ++ + S+ + +N +ISA SQN + QLF R K P + T
Sbjct: 625 MYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF---RNLKLEPNEIT 681
Query: 293 LCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
+L+A + L S G Q H +I+ G + N FV++ALVDMYS G ++ V +
Sbjct: 682 FVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSG 741
Query: 353 VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V + W ++I + G G +A+ELF L + E+ P+ F ++L+AC+H+GF+++G
Sbjct: 742 VNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEG 800
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 151/300 (50%), Gaps = 6/300 (2%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
+H + +G + L +AL++ YAK + A VF M+ D VSW +++ ANG
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 169 GRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC 228
R + FK M G+ + + T + VISAC ++ L +LH V+K G+ V
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE-LTLGESLHGLVIKSGYSPEAHVSV 328
Query: 229 --SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQ-KK 285
S++ Y+ C + + + E +D I N++++ ++ N +A + +M+ K
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDK 388
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE-RNVFVASALVDMYSKGGDIDEA 344
P T+ +I + C L+ EGR VH ++M + R + V ++++DMY K G +A
Sbjct: 389 IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHI-YFTAILTACN 403
+ T+ ++ V W +MI ++Q+G +A LF +++E + + AILT+C+
Sbjct: 449 ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD 508
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 146/307 (47%), Gaps = 7/307 (2%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQ 168
+H + ++ G +L SS L+ FY + +V + +F +K D + W S+I + NG+
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 169 GRDAFLLFKEMLGTHIKPNCF--TLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFV 226
A LF EM+ K N F T + ++ + + CS LH ++ G + +
Sbjct: 169 YIAAVGLFIEMIH---KGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 227 ICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
+L++ YA + + + + +D + +N++++ N +LQ F M
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG--SERNVFVASALVDMYSKGGDIDEA 344
T +++ACSS+ L G +H LVIK G E +V V ++++ MYSK GD + A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 345 RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
V ++ ++ + ++ G+A +G EA + +++ + ++ PD +I + C
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 405 AGFLEKG 411
F +G
Sbjct: 406 LSFSREG 412
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 1/194 (0%)
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
++H +K G L+ Y ++ S L +E EKD IV+NSMI+A +QN
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
A+ LF+EM K TL +A SSL + +H L I+ G + + +
Sbjct: 168 RYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCN 227
Query: 330 ALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELT 389
AL+++Y+KG ++ A V ++ V W T++ +G ++L+ F + +T
Sbjct: 228 ALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYF-KSMTGSGQE 286
Query: 390 PDHIYFTAILTACN 403
D + F+ +++AC+
Sbjct: 287 ADTVTFSCVISACS 300
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 167/363 (46%), Gaps = 51/363 (14%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + +++ ++ + L T M + P + L +C+K G H +VR
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
G+ N ++ +AL+ F+A C + A ++F +V+W+S+ +G++ G+ +A L
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F EM + +I+ C+
Sbjct: 201 FDEM----PYKDQVAWNVMITGCL------------------------------------ 220
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
CK++D + L + +EKD + +N+MIS Y +AL +F EMR P T+ +
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGS-ERNVFVAS----ALVDMYSKGGDIDEARFVLDQ 350
+L+AC+ L L G+++H +++ S +++V + AL+DMY+K G ID A V
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 351 TSVKNNVLWTTMIMGYA--QSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
++ W T+I+G A + +E E RL ++ P+ + F ++ AC+H+G +
Sbjct: 341 VKDRDLSTWNTLIVGLALHHAEGSIEMFEEMQRL----KVWPNEVTFIGVILACSHSGRV 396
Query: 409 EKG 411
++G
Sbjct: 397 DEG 399
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 125/237 (52%), Gaps = 9/237 (3%)
Query: 134 KCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTS 193
KC + AR++F D V+W ++I+G+ G ++A +FKEM P+ T+ S
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 194 VISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS-----LVDCYANCKQIDDSLLLLN 248
++SAC D L+ LH ++++ +S+ + + L+D YA C ID ++ +
Sbjct: 281 LLSACAVLGD-LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFR 339
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
++D +N++I + + G ++++F EM++ K P + T ++ ACS + E
Sbjct: 340 GVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDE 398
Query: 309 GRQVHSLVIKMGS-ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN-VLWTTMI 363
GR+ SL+ M + E N+ +VDM + G ++EA ++ ++ N ++W T++
Sbjct: 399 GRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL 455
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 211 LHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL----LLNETSEKDTIVYNSMISAYS 266
+HA +V G ++ V+ L+ Y+ + +L L +E + D + N ++ +
Sbjct: 31 IHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 267 QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVF 326
Q++ + L+ EM ++ SP +T +L ACS L G H V++ G N +
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 327 VASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTER 386
V +AL+ ++ GD+ A + D ++ + V W++M GYA+ G+ EA+ LFD + +
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK- 207
Query: 387 ELTPDHIYFTAILTAC 402
D + + ++T C
Sbjct: 208 ----DQVAWNVMITGC 219
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 167/342 (48%), Gaps = 43/342 (12%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
R+L+L M R + PS + + + + A + LQ H + + G+ ++ + + L+
Sbjct: 854 RSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIW--KFGFGFHVKIQTTLI 911
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
DFY SA G+ R+A +F EM + +
Sbjct: 912 DFY-------------------------------SATGRIREARKVFDEM----PERDDI 936
Query: 190 TLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE 249
T+++SA D + ++L + ++ TSN C L++ Y ++ + L N+
Sbjct: 937 AWTTMVSAYRRVLD-MDSANSLANQMSEKNEATSN---C-LINGYMGLGNLEQAESLFNQ 991
Query: 250 TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEG 309
KD I + +MI YSQN +A+ +F +M ++ P + T+ T+++AC+ L L G
Sbjct: 992 MPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIG 1051
Query: 310 RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQS 369
++VH ++ G +V++ SALVDMYSK G ++ A V KN W ++I G A
Sbjct: 1052 KEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAH 1111
Query: 370 GRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
G EAL++F ++ E + P+ + F ++ TAC HAG +++G
Sbjct: 1112 GFAQEALKMFAKMEME-SVKPNAVTFVSVFTACTHAGLVDEG 1152
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 130/249 (52%), Gaps = 3/249 (1%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E N S+ L++ Y + A +F M V D +SWT++I G+S N + R+A +F +
Sbjct: 963 EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M+ I P+ T+++VISAC L+ +H + ++ GF ++ +LVD Y+ C
Sbjct: 1023 MMEEGIIPDEVTMSTVISAC-AHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 1081
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
++ +LL+ +K+ +NS+I + + + +AL++F +M + P T ++
Sbjct: 1082 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 1141
Query: 299 ACSSLASLIEGRQVH-SLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN- 356
AC+ + EGR+++ S++ NV +V ++SK G I EA ++ + N
Sbjct: 1142 ACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNA 1201
Query: 357 VLWTTMIMG 365
V+W ++ G
Sbjct: 1202 VIWGALLDG 1210
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 43/256 (16%)
Query: 156 WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHV 215
+ +L GF + L+ ML + P+ +T +S++ A A + +L AH+
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS---SFASRFGESLQAHI 895
Query: 216 VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDAL 275
K GF + +L+D Y+ +I ++ + +E E+D I + +M+SAY + L
Sbjct: 896 WKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLD----- 950
Query: 276 QLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMY 335
+++ +SLA+ + SE+N ++ L++ Y
Sbjct: 951 ---------------------MDSANSLANQM-------------SEKNEATSNCLINGY 976
Query: 336 SKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYF 395
G++++A + +Q VK+ + WTTMI GY+Q+ R EA+ +F +++ E + PD +
Sbjct: 977 MGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMM-EEGIIPDEVTM 1035
Query: 396 TAILTACNHAGFLEKG 411
+ +++AC H G LE G
Sbjct: 1036 STVISACAHLGVLEIG 1051
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 34/242 (14%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I +S+N A+ + M P + + T +S+CA +G ++H Y +++G+
Sbjct: 1004 IKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF 1063
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
++++ SALVD Y+KC ++ A VF + + W S+I G +A+G ++A +F +
Sbjct: 1064 VLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAK 1123
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M +KPN T SV +AC HA +V G R + S++D Y+
Sbjct: 1124 MEMESVKPNAVTFVSVFTACT------------HAGLVDEGRR----IYRSMIDDYSIVS 1167
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
++ Y M+ +S+ +AL+L M +F P +L+
Sbjct: 1168 NVEH---------------YGGMVHLFSKAGLIYEALELIGNM---EFEPNAVIWGALLD 1209
Query: 299 AC 300
C
Sbjct: 1210 GC 1211
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 157/322 (48%), Gaps = 33/322 (10%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVD------FYAKCFAIVDARKVFRAMKVHDQVSWTSLIA 161
Q+ ++ + +G+ + FL S L++ F FA+ ++FR + W ++I
Sbjct: 21 QLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAV----QIFRYIPKPLTNDWNAIIR 76
Query: 162 GFSANGQGRDAFLLFKEMLGTHI------KPNCFTLTSVISACVGQKDALQHCST----L 211
GF+ + AF ++ ML + + T + + AC A CS+ L
Sbjct: 77 GFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKAC-----ARALCSSAMDQL 131
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCS 271
H + +RG + + +L+D Y+ + + L +E +D +N++I+ +
Sbjct: 132 HCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRA 191
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV-HSLVIKMGSERNVFVASA 330
+A++L+ M + ++ T+ L ACS L + EG + H S NV V++A
Sbjct: 192 SEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGY-----SNDNVIVSNA 246
Query: 331 LVDMYSKGGDIDEARFVLDQ-TSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELT 389
+DMYSK G +D+A V +Q T K+ V W TMI G+A G ALE+FD+ L + +
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDK-LEDNGIK 305
Query: 390 PDHIYFTAILTACNHAGFLEKG 411
PD + + A LTAC HAG +E G
Sbjct: 306 PDDVSYLAALTACRHAGLVEYG 327
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 147/302 (48%), Gaps = 12/302 (3%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
L +CA+A Q+H + R G + L + L+D Y+K ++ A K+F M V D
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDV 175
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
SW +LIAG + + +A L+K M I+ + T+ + + AC D + + H
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH- 234
Query: 214 HVVKRGFRTSNFVIC-SLVDCYANCKQIDDSLLLLNE-TSEKDTIVYNSMISAYSQNLCS 271
G+ N ++ + +D Y+ C +D + + + T +K + +N+MI+ ++ + +
Sbjct: 235 -----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEA 289
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE-GRQVHSLVIKMGSERNVFVASA 330
AL++F ++ P D + L AC A L+E G V + + G ERN+
Sbjct: 290 HRALEIFDKLEDNGIKPDDVSYLAALTACRH-AGLVEYGLSVFNNMACKGVERNMKHYGC 348
Query: 331 LVDMYSKGGDIDEARFVLDQTS-VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELT 389
+VD+ S+ G + EA ++ S + + VLW ++ +G ++ +E E+ R + E +
Sbjct: 349 VVDLLSRAGRLREAHDIICSMSMIPDPVLWQSL-LGASEIYSDVEMAEIASREIKEMGVN 407
Query: 390 PD 391
D
Sbjct: 408 ND 409
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 172/360 (47%), Gaps = 44/360 (12%)
Query: 92 TALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD-ARKVFRAMKV 150
+ + +CA ++ G +H + S + NL++ +AL+ Y + F VD AR++F M
Sbjct: 189 SVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKR-FGKVDVARRLFDRMSE 247
Query: 151 HDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC------------ 198
D VSW ++I +++ + +AF L M + ++ + T ++ C
Sbjct: 248 RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNC 307
Query: 199 -VGQKD------------ALQHCSTLHAHVVKRG-------FRTSNF------VICSLVD 232
VG ++ L+ CS H +K G R+ +F V SL+
Sbjct: 308 VVGMRNCNVRIGSVAMINGLKACS--HIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLIT 365
Query: 233 CYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
Y+ C + + ++ + +NS+IS ++ N S + L EM F P T
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 293 LCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV-ASALVDMYSKGGDIDEARFVLDQT 351
L +IL + + +L G++ H +++ S ++ + ++LVDMY+K G+I A+ V D
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 352 SVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ V +T++I GY + G+G AL F + + + PDH+ A+L+AC+H+ + +G
Sbjct: 486 RKRDKVTYTSLIDGYGRLGKGEVALAWF-KDMDRSGIKPDHVTMVAVLSACSHSNLVREG 544
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 151/355 (42%), Gaps = 39/355 (10%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
LS+C + G Q+HA+ + SG E + L LV FY+ + +A+ + ++
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
+ W LI + N + +++ ++K M+ I+ + FT SVI AC D + +H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLD-FAYGRVVHG 208
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
+ R + +V +L+ Y ++D + L + SE+D + +N++I+ Y+ G+
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 274 ALQLFVEMRQKKFSPTDHTLCTI-----------------------------------LN 298
A +L M + T TI L
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVF--VASALVDMYSKGGDIDEARFVLDQTSVKNN 356
ACS + +L G+ H LVI+ S + V ++L+ MYS+ D+ A V Q +
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W ++I G+A + R E L +L P+HI +IL G L+ G
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQHG 442
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 17/285 (5%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY--EDNLFLSSAL 128
AL+ + GM + + L +C+ G H ++RS D + ++L
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
+ Y++C + A VF+ ++ + +W S+I+GF+ N + + L KEML + PN
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 189 FTLTSVIS--ACVGQKDALQHCSTLHAHVVKR-GFRTSNFVICSLVDCYANCKQIDDSLL 245
TL S++ A VG LQH H ++++R ++ + SLVD YA +I +
Sbjct: 424 ITLASILPLFARVGN---LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGD-ALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
+ + ++D + Y S+I Y + L G+ AL F +M + P T+ +L+ACS +
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGR-LGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH-S 538
Query: 305 SLIEGRQVHSLVIKM----GSERNVFVASALVDMYSKGGDIDEAR 345
+L+ R+ H L KM G + S +VD+Y + G +D+AR
Sbjct: 539 NLV--REGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKAR 581
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 13/250 (5%)
Query: 142 RKVFRAMKVHD-----QVSWTSLIAGFSANGQGRDAFLLF---KEMLGTHIKPNCFTLTS 193
R + K HD QV + S S +GQ +AF F + G+H + ++ S
Sbjct: 31 RPISETSKTHDDESVPQVLFNSFRHCIS-HGQLYEAFRTFSLLRYQSGSH-EFVLYSSAS 88
Query: 194 VISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK 253
++S CVG + + LHAH + G + ++ LV Y+ +D++ + +
Sbjct: 89 LLSTCVGFNEFVPG-QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 254 DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVH 313
+ +N +I +Y +N +++ ++ M K + T +++ AC++L GR VH
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 314 SLVIKMGSER-NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRG 372
I++ S R N++V +AL+ MY + G +D AR + D+ S ++ V W +I Y +
Sbjct: 208 G-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 373 LEALELFDRL 382
EA +L DR+
Sbjct: 267 GEAFKLLDRM 276
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + N ++ LL M P+ L + L A+ N G + H Y++R
Sbjct: 392 NSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILR 451
Query: 116 -SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
Y+D L L ++LVD YAK I+ A++VF +M+ D+V++TSLI G+ G+G A
Sbjct: 452 RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALA 511
Query: 175 LFKEMLGTHIKPNCFTLTSVISAC 198
FK+M + IKP+ T+ +V+SAC
Sbjct: 512 WFKDMDRSGIKPDHVTMVAVLSAC 535
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 247 LNETSE--KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL-----CTILNA 299
++ETS+ D V + +++ + G + F ++ H ++L+
Sbjct: 33 ISETSKTHDDESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLST 92
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLW 359
C + G+Q+H+ I G E + + LV YS +DEA+ + + + + + + W
Sbjct: 93 CVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPW 152
Query: 360 TTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
+I Y ++ R E++ ++ R+++ + + D + +++ AC
Sbjct: 153 NVLIGSYIRNKRFQESVSVYKRMMS-KGIRADEFTYPSVIKAC 194
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 172/360 (47%), Gaps = 44/360 (12%)
Query: 92 TALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD-ARKVFRAMKV 150
+ + +CA ++ G +H + S + NL++ +AL+ Y + F VD AR++F M
Sbjct: 189 SVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKR-FGKVDVARRLFDRMSE 247
Query: 151 HDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC------------ 198
D VSW ++I +++ + +AF L M + ++ + T ++ C
Sbjct: 248 RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNC 307
Query: 199 -VGQKD------------ALQHCSTLHAHVVKRG-------FRTSNF------VICSLVD 232
VG ++ L+ CS H +K G R+ +F V SL+
Sbjct: 308 VVGMRNCNVRIGSVAMINGLKACS--HIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLIT 365
Query: 233 CYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
Y+ C + + ++ + +NS+IS ++ N S + L EM F P T
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 293 LCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV-ASALVDMYSKGGDIDEARFVLDQT 351
L +IL + + +L G++ H +++ S ++ + ++LVDMY+K G+I A+ V D
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 352 SVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ V +T++I GY + G+G AL F + + + PDH+ A+L+AC+H+ + +G
Sbjct: 486 RKRDKVTYTSLIDGYGRLGKGEVALAWF-KDMDRSGIKPDHVTMVAVLSACSHSNLVREG 544
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 151/355 (42%), Gaps = 39/355 (10%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
LS+C + G Q+HA+ + SG E + L LV FY+ + +A+ + ++
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
+ W LI + N + +++ ++K M+ I+ + FT SVI AC D + +H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLD-FAYGRVVHG 208
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
+ R + +V +L+ Y ++D + L + SE+D + +N++I+ Y+ G+
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 274 ALQLFVEMRQKKFSPTDHTLCTI-----------------------------------LN 298
A +L M + T TI L
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVF--VASALVDMYSKGGDIDEARFVLDQTSVKNN 356
ACS + +L G+ H LVI+ S + V ++L+ MYS+ D+ A V Q +
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W ++I G+A + R E L +L P+HI +IL G L+ G
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQHG 442
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 17/285 (5%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY--EDNLFLSSAL 128
AL+ + GM + + L +C+ G H ++RS D + ++L
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
+ Y++C + A VF+ ++ + +W S+I+GF+ N + + L KEML + PN
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 189 FTLTSVIS--ACVGQKDALQHCSTLHAHVVKR-GFRTSNFVICSLVDCYANCKQIDDSLL 245
TL S++ A VG LQH H ++++R ++ + SLVD YA +I +
Sbjct: 424 ITLASILPLFARVGN---LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGD-ALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
+ + ++D + Y S+I Y + L G+ AL F +M + P T+ +L+ACS +
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGR-LGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH-S 538
Query: 305 SLIEGRQVHSLVIKM----GSERNVFVASALVDMYSKGGDIDEAR 345
+L+ R+ H L KM G + S +VD+Y + G +D+AR
Sbjct: 539 NLV--REGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKAR 581
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 13/250 (5%)
Query: 142 RKVFRAMKVHD-----QVSWTSLIAGFSANGQGRDAFLLF---KEMLGTHIKPNCFTLTS 193
R + K HD QV + S S +GQ +AF F + G+H + ++ S
Sbjct: 31 RPISETSKTHDDESVPQVLFNSFRHCIS-HGQLYEAFRTFSLLRYQSGSH-EFVLYSSAS 88
Query: 194 VISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK 253
++S CVG + + LHAH + G + ++ LV Y+ +D++ + +
Sbjct: 89 LLSTCVGFNEFVPG-QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 254 DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVH 313
+ +N +I +Y +N +++ ++ M K + T +++ AC++L GR VH
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 314 SLVIKMGSER-NVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRG 372
I++ S R N++V +AL+ MY + G +D AR + D+ S ++ V W +I Y +
Sbjct: 208 G-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 373 LEALELFDRL 382
EA +L DR+
Sbjct: 267 GEAFKLLDRM 276
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ + N ++ LL M P+ L + L A+ N G + H Y++R
Sbjct: 392 NSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILR 451
Query: 116 -SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
Y+D L L ++LVD YAK I+ A++VF +M+ D+V++TSLI G+ G+G A
Sbjct: 452 RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALA 511
Query: 175 LFKEMLGTHIKPNCFTLTSVISAC 198
FK+M + IKP+ T+ +V+SAC
Sbjct: 512 WFKDMDRSGIKPDHVTMVAVLSAC 535
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 247 LNETSE--KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL-----CTILNA 299
++ETS+ D V + +++ + G + F ++ H ++L+
Sbjct: 33 ISETSKTHDDESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLST 92
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLW 359
C + G+Q+H+ I G E + + LV YS +DEA+ + + + + + + W
Sbjct: 93 CVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPW 152
Query: 360 TTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
+I Y ++ R E++ ++ R+++ + + D + +++ AC
Sbjct: 153 NVLIGSYIRNKRFQESVSVYKRMMS-KGIRADEFTYPSVIKAC 194
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 139/272 (51%), Gaps = 3/272 (1%)
Query: 141 ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVG 200
A +FR + + ++I G+ +A + EM+ +P+ FT ++ AC
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNS 260
K +++ +H V K G FV SL++ Y C +++ S + + K ++S
Sbjct: 145 LK-SIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSS 203
Query: 261 MISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM 319
M+SA + + L LF M + + + + L AC++ +L G +H +++
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263
Query: 320 GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELF 379
SE N+ V ++LVDMY K G +D+A + + +NN+ ++ MI G A G G AL +F
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 380 DRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+++ E L PDH+ + ++L AC+H+G +++G
Sbjct: 324 SKMIKEG-LEPDHVVYVSVLNACSHSGLVKEG 354
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 153/315 (48%), Gaps = 5/315 (1%)
Query: 53 TFE-NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHA 111
TF+ N I + S + AL M + +P L +C + ++ G QIH
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHG 156
Query: 112 YLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRD 171
+ + G E ++F+ ++L++ Y +C + + VF ++ SW+S+++ + G +
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSE 216
Query: 172 AFLLFKEMLG-THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSL 230
LLF+ M T++K + S + AC AL ++H +++ + V SL
Sbjct: 217 CLLLFRGMCSETNLKAEESGMVSALLAC-ANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
VD Y C +D +L + + +++ + Y++MIS + + AL++F +M ++ P
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGS-ERNVFVASALVDMYSKGGDIDEARFVLD 349
++LNACS + EGR+V + ++K G E LVD+ + G ++EA +
Sbjct: 336 VVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 395
Query: 350 QTSV-KNNVLWTTMI 363
+ KN+V+W T +
Sbjct: 396 SIPIEKNDVIWRTFL 410
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 105/196 (53%), Gaps = 6/196 (3%)
Query: 72 LDLLTGM-NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
L L GM + K +S + +AL +CA +LG+ IH +L+R+ E N+ + ++LVD
Sbjct: 218 LLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVD 277
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
Y KC + A +F+ M+ + ++++++I+G + +G+G A +F +M+ ++P+
Sbjct: 278 MYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVV 337
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRG--FRTSNFVICSLVDCYANCKQIDDSLLLLN 248
SV++AC ++ + A ++K G T+ C LVD ++++L +
Sbjct: 338 YVSVLNAC-SHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC-LVDLLGRAGLLEEALETIQ 395
Query: 249 ETS-EKDTIVYNSMIS 263
EK+ +++ + +S
Sbjct: 396 SIPIEKNDVIWRTFLS 411
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 167/360 (46%), Gaps = 44/360 (12%)
Query: 56 NDCITKHSKNASTDRALD----LLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHA 111
N I H K+ +++ D +L+ N L KP + + +C R GLQ+H
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDL--KPDNYTVNFLVQACTGLRMRETGLQVHG 132
Query: 112 YLVRSGYEDNLFLSSALVDFYA-------------------------------KCFAIVD 140
+R G++++ + + L+ YA +C +V
Sbjct: 133 MTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVF 192
Query: 141 ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVG 200
ARK+F M D ++W ++I+G++ G+ R+A +F M +K N + SV+SAC
Sbjct: 193 ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACT- 251
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNS 260
Q AL H+++ + + + + +LVD YA C ++ ++ + EK+ ++S
Sbjct: 252 QLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSS 311
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEG-RQVHSLVIKM 319
++ + N L+LF M+Q +P T ++L CS + + EG R S+ +
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEF 371
Query: 320 GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN-VLWTTMIMGYAQSGRGLEALEL 378
G E + LVD+Y++ G +++A ++ Q +K + +W++++ + R + LEL
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL----HASRMYKNLEL 427
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 164/346 (47%), Gaps = 51/346 (14%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ------VSWTSLIA 161
QIHA L Y D LV + K A+ D + + A ++ D+ + S+I
Sbjct: 24 QIHAKL----YVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIR 79
Query: 162 GFSANGQGRDAFLLFKEML--GTHIKPNCFTLTSVISACVG---QKDALQHCSTLHAHVV 216
+ +F ++ +L G +KP+ +T+ ++ AC G ++ LQ +H +
Sbjct: 80 AHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ----VHGMTI 135
Query: 217 KRGFRTSNFVICSLVDCYA------NCKQIDDSLL------------------------- 245
+RGF V L+ YA +C ++ +S+
Sbjct: 136 RRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARK 195
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
L E+D I +N+MIS Y+Q S +AL +F M+ + + ++L+AC+ L +
Sbjct: 196 LFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGA 255
Query: 306 LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMG 365
L +GR HS + + + V +A+ LVD+Y+K GD+++A V KN W++ + G
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNG 315
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
A +G G + LELF L+ + +TP+ + F ++L C+ GF+++G
Sbjct: 316 LAMNGFGEKCLELFS-LMKQDGVTPNAVTFVSVLRGCSVVGFVDEG 360
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 138/273 (50%), Gaps = 35/273 (12%)
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
A +++++ KP+ FT V+ V D + +H VV GF +S V+ L+
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSD-VWFGRQIHGQVVVFGFDSSVHVVTGLI 158
Query: 232 DCYANCKQIDDSLLLLNETSEKDTIVYNSM------------------------------ 261
Y +C + D+ + +E KD V+N++
Sbjct: 159 QMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSW 218
Query: 262 ---ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK 318
IS Y+++ + +A+++F M + P + TL +L+AC+ L SL G ++ S V
Sbjct: 219 TCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDH 278
Query: 319 MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALEL 378
G R V + +A++DMY+K G+I +A V + + +N V WTT+I G A G G EAL +
Sbjct: 279 RGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAM 338
Query: 379 FDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
F+R++ + + P+ + F AIL+AC+H G+++ G
Sbjct: 339 FNRMV-KAGVRPNDVTFIAILSACSHVGWVDLG 370
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 162/348 (46%), Gaps = 41/348 (11%)
Query: 81 LTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD 140
L AKP L + + G QIH +V G++ ++ + + L+ Y C + D
Sbjct: 110 LCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGD 169
Query: 141 ARKVFRAMKVHD---------------------------------QVSWTSLIAGFSANG 167
ARK+F M V D +VSWT +I+G++ +G
Sbjct: 170 ARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSG 229
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
+ +A +F+ ML +++P+ TL +V+SAC +L+ + ++V RG + +
Sbjct: 230 RASEAIEVFQRMLMENVEPDEVTLLAVLSAC-ADLGSLELGERICSYVDHRGMNRAVSLN 288
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
+++D YA I +L + +E++ + + ++I+ + + +AL +F M +
Sbjct: 289 NAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVR 348
Query: 288 PTDHTLCTILNACSSLASLIEGRQV-HSLVIKMGSERNVFVASALVDMYSKGGDIDEARF 346
P D T IL+ACS + + G+++ +S+ K G N+ ++D+ + G + EA
Sbjct: 349 PNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADE 408
Query: 347 VLDQTSVK-NNVLWTTMIMGYAQSGRGLEALELFDRLLTER-ELTPDH 392
V+ K N +W +++ + LEL +R L+E +L P++
Sbjct: 409 VIKSMPFKANAAIWGSLL----AASNVHHDLELGERALSELIKLEPNN 452
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 39/237 (16%)
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCS 271
H +++ G N + ++ +N + + + +T ++N+MI A S L
Sbjct: 35 HCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSL-LDE 93
Query: 272 GDALQLFVEMRQKKFS----PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
+A + + + +K ++ P T +L ++ + GRQ+H V+ G + +V V
Sbjct: 94 PNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHV 153
Query: 328 ASALVDM-------------------------------YSKGGDIDEARFVLDQTS--VK 354
+ L+ M Y K G++DEAR +L+ V+
Sbjct: 154 VTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVR 213
Query: 355 NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
N V WT +I GYA+SGR EA+E+F R+L E + PD + A+L+AC G LE G
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLME-NVEPDEVTLLAVLSACADLGSLELG 269
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ ++K+ A+++ M +P + L LS+CA + LG +I +Y+ G
Sbjct: 222 ISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGM 281
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ L++A++D YAK I A VF + + V+WT++IAG + +G G +A +F
Sbjct: 282 NRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNR 341
Query: 179 MLGTHIKPNCFTLTSVISAC--VGQKD 203
M+ ++PN T +++SAC VG D
Sbjct: 342 MVKAGVRPNDVTFIAILSACSHVGWVD 368
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 140/281 (49%), Gaps = 16/281 (5%)
Query: 141 ARKVFRAMKVHDQVSWTSLIAGFSANGQ---GRDAFLLFKEMLGTHIKPNCFTLTSVISA 197
A +F ++++ + + ++I S + Q G FLL + I P+ T +I A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 198 CVGQKDALQHC-----STLHAHVVKRG-FRTSNFVICSLVDCYANCKQIDDSLLLLNETS 251
C L+ C +H VVK G F + + V ++ Y K + D+ + +E
Sbjct: 126 C------LKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIP 179
Query: 252 EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQ 311
+ D + ++ +++ Y + + L++F EM K P + ++ T L AC+ + +L +G+
Sbjct: 180 QPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKW 239
Query: 312 VHSLVIKMGS-ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSG 370
+H V K E +VFV +ALVDMY+K G I+ A V + + +N W +I GYA G
Sbjct: 240 IHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYG 299
Query: 371 RGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+A+ +RL E + PD + +L AC H GFLE+G
Sbjct: 300 YAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 145/289 (50%), Gaps = 12/289 (4%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG-YEDNLFLSSALVDFYAKCFAIVDARK 143
PS + +C KA + +G QIH ++V++G + + + + ++ Y + ++DARK
Sbjct: 114 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARK 173
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD 203
VF + D V W L+ G+ G G + +F+EML ++P+ F++T+ ++AC Q
Sbjct: 174 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTAC-AQVG 232
Query: 204 ALQHCSTLHAHVVKRGFRTSN-FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
AL +H V K+ + S+ FV +LVD YA C I+ ++ + + + ++ + ++I
Sbjct: 233 ALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALI 292
Query: 263 SAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
Y+ + A+ + R+ P L +L AC+ L EGR S++ M +
Sbjct: 293 GGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR---SMLENMEA 349
Query: 322 ERNVFVA----SALVDMYSKGGDIDEARFVLDQTSVKN-NVLWTTMIMG 365
+ S +VD+ + G +D+A ++++ +K +W ++ G
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 115/246 (46%), Gaps = 6/246 (2%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY-EDNLFLSSALVDFYAKCFAIVDAR 142
+P + + TAL++CA+ G IH ++ + + E ++F+ +ALVD YAKC I A
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 143 KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH-IKPNCFTLTSVISACVGQ 201
+VF+ + + SW +LI G++A G + A + + IKP+ L V++AC
Sbjct: 275 EVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHG 334
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTI-VYNS 260
+ S L + + +VD ++DD+L L+ + K V+ +
Sbjct: 335 GFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGA 394
Query: 261 MISA--YSQNLCSGD-ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI 317
+++ +N+ G+ A++ +++ + + L + N S+ E +V ++
Sbjct: 395 LLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIE 454
Query: 318 KMGSER 323
+ G +
Sbjct: 455 QRGVRK 460
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 16/281 (5%)
Query: 141 ARKVFRAMKVHDQVSWTSLIAGFSANGQ---GRDAFLLFKEMLGTHIKPNCFTLTSVISA 197
A +F ++++ + + ++I S + Q G FLL + I P+ T +I A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 198 CVGQKDALQHC-----STLHAHVVKRG-FRTSNFVICSLVDCYANCKQIDDSLLLLNETS 251
C L+ C +H VVK G F + V ++ Y K + D+ + +E
Sbjct: 126 C------LKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIP 179
Query: 252 EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQ 311
+ D + ++ +++ Y + + L++F EM + P + ++ T L AC+ + +L +G+
Sbjct: 180 QPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKW 239
Query: 312 VHSLVIK-MGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSG 370
+H V K E +VFV +ALVDMY+K G I+ A V ++ + +N W +I GYA G
Sbjct: 240 IHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYG 299
Query: 371 RGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+A DR+ E + PD + +L AC H GFLE+G
Sbjct: 300 YAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 142/286 (49%), Gaps = 6/286 (2%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG-YEDNLFLSSALVDFYAKCFAIVDARK 143
PS + +C KA + +G QIH ++V++G + + + + ++ Y + + DARK
Sbjct: 114 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARK 173
Query: 144 VFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD 203
VF + D V W L+ G+ G G + +FKEML I+P+ F++T+ ++AC Q
Sbjct: 174 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTAC-AQVG 232
Query: 204 ALQHCSTLHAHVVKRGFRTSN-FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
AL +H V K+ + S+ FV +LVD YA C I+ ++ + + + ++ + ++I
Sbjct: 233 ALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALI 292
Query: 263 SAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGR-QVHSLVIKMG 320
Y+ + A + R+ P L +L AC+ L EGR + ++ + G
Sbjct: 293 GGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYG 352
Query: 321 SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN-NVLWTTMIMG 365
S +VD+ + G +D+A ++++ +K +W ++ G
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 117/257 (45%), Gaps = 6/257 (2%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY-EDNLFLSSAL 128
L++ M +P + + TAL++CA+ G IH ++ + + E ++F+ +AL
Sbjct: 201 EGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTAL 260
Query: 129 VDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH-IKPN 187
VD YAKC I A +VF + + SW +LI G++A G + A + IKP+
Sbjct: 261 VDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPD 320
Query: 188 CFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLL 247
L V++AC + + L + G + +VD ++DD+L L+
Sbjct: 321 SVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLI 380
Query: 248 NETSEKDTI-VYNSMISA--YSQNLCSGD-ALQLFVEMRQKKFSPTDHTLCTILNACSSL 303
+ K V+ ++++ +N+ G+ A+Q +++ + + L + N S+
Sbjct: 381 EKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSV 440
Query: 304 ASLIEGRQVHSLVIKMG 320
E +V ++ + G
Sbjct: 441 QRNPEAFKVRGMIEQRG 457
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 44/350 (12%)
Query: 98 AKARN-WHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSW 156
K+RN W +I+A ++ G + F+ + +VDF K + A ++F + + +
Sbjct: 20 VKSRNEWK---KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLY 76
Query: 157 TSLIAGFSANGQGRDAFLLFKEMLGTHIK-PNCFTLTSVISACVGQKDALQHC---STLH 212
S+I ++ N D ++K++L + P+ FT + +C +L C +H
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA----SLGSCYLGKQVH 132
Query: 213 AHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNS------------ 260
H+ K G R +L+D Y + D+ + +E E+D I +NS
Sbjct: 133 GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK 192
Query: 261 -------------------MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
MIS Y+ C +A+ F EM+ P + +L ++L +C+
Sbjct: 193 KAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCA 252
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTT 361
L SL G+ +H + G + V +AL++MYSK G I +A + Q K+ + W+T
Sbjct: 253 QLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWST 312
Query: 362 MIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
MI GYA G A+E F+ + ++ P+ I F +L+AC+H G ++G
Sbjct: 313 MISGYAYHGNAHGAIETFNE-MQRAKVKPNGITFLGLLSACSHVGMWQEG 361
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 157/340 (46%), Gaps = 37/340 (10%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P + SCA + +LG Q+H +L + G ++ +AL+D Y K +VDA KV
Sbjct: 107 PDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKV 166
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGR-------------------------------DAF 173
F M D +SW SL++G++ GQ + +A
Sbjct: 167 FDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAM 226
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
F+EM I+P+ +L SV+ +C Q +L+ +H + +RGF V +L++
Sbjct: 227 DFFREMQLAGIEPDEISLISVLPSC-AQLGSLELGKWIHLYAERRGFLKQTGVCNALIEM 285
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
Y+ C I ++ L + KD I +++MIS Y+ + + A++ F EM++ K P T
Sbjct: 286 YSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITF 345
Query: 294 CTILNACSSLASLIEGRQVHSLVIK-MGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
+L+ACS + EG + ++ + E + L+D+ ++ G ++ A +
Sbjct: 346 LGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP 405
Query: 353 VK-NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPD 391
+K ++ +W +++ G AL D L+ EL P+
Sbjct: 406 MKPDSKIWGSLLSSCRTPGNLDVALVAMDHLV---ELEPE 442
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
A+D M +P + L + L SCA+ + LG IH Y R G+ + +AL+
Sbjct: 224 EAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 130 DFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCF 189
+ Y+KC I A ++F M+ D +SW+++I+G++ +G A F EM +KPN
Sbjct: 284 EMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 190 TLTSVISAC 198
T ++SAC
Sbjct: 344 TFLGLLSAC 352
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 163/339 (48%), Gaps = 39/339 (11%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVD---ARKVFRAMKVHDQVSWTSLIAGFS 164
+IHA+L+R + L L F + C ++ + A +VF ++ + + + ++I +S
Sbjct: 22 EIHAHLLRHFLHGSNLL---LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
G ++ F M I + +T ++ +C D L+ +H +++ GF
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSD-LRFGKCVHGELIRTGFHRLG 137
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYN------------------------- 259
+ +V+ Y + ++ D+ + +E SE++ +V+N
Sbjct: 138 KIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER 197
Query: 260 ------SMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVH 313
SMIS+ S+ +AL+LF EM + F P + T+ T+L +SL L G+ +H
Sbjct: 198 SIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIH 257
Query: 314 SLVIKMGSERN-VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRG 372
S G ++ + V +ALVD Y K GD++ A + + +N V W T+I G A +G+G
Sbjct: 258 STAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKG 317
Query: 373 LEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++LFD ++ E ++ P+ F +L C++ G +E+G
Sbjct: 318 EFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERG 356
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 40/307 (13%)
Query: 94 LSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVF-------- 145
L SC+ + G +H L+R+G+ + +V+ Y + DA+KVF
Sbjct: 109 LKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNV 168
Query: 146 -----------------RAMKVHDQ------VSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
R + + Q VSW S+I+ S G+ R+A LF EM+
Sbjct: 169 VVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQ 228
Query: 183 HIKPNCFTLTSV--ISACVGQKDALQHCSTLHAHVVKRG-FRTSNFVICSLVDCYANCKQ 239
P+ T+ +V ISA +G L +H+ G F+ V +LVD Y
Sbjct: 229 GFDPDEATVVTVLPISASLG---VLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 240 IDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILN 298
++ + + + ++ + +N++IS + N + LF M + K +P + T +L
Sbjct: 286 LEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLA 345
Query: 299 ACSSLASLIEGRQVHSLVI-KMGSERNVFVASALVDMYSKGGDIDEA-RFVLDQTSVKNN 356
CS + G ++ L++ + E A+VD+ S+ G I EA +F+ + N
Sbjct: 346 CCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANA 405
Query: 357 VLWTTMI 363
+W +++
Sbjct: 406 AMWGSLL 412
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ SK AL+L M P ++ + T L A G IH+
Sbjct: 203 NSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAES 262
Query: 116 SG-YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
SG ++D + + +ALVDFY K + A +FR M+ + VSW +LI+G + NG+G
Sbjct: 263 SGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGID 322
Query: 175 LFKEMLGT-HIKPNCFTLTSVISAC--VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
LF M+ + PN T V++ C GQ + + L K RT ++ ++V
Sbjct: 323 LFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHY--GAMV 380
Query: 232 DCYANCKQIDDSL-LLLNETSEKDTIVYNSMISA 264
D + +I ++ L N + ++ S++SA
Sbjct: 381 DLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 131/233 (56%), Gaps = 8/233 (3%)
Query: 187 NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLL 246
+ F++ I QK + +HA V K GF + SLV Y++ +D + +
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 247 LNETSEKDTIV-YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
+ET EK IV + +MISAY++N S +A++LF M +K + L+AC+ L +
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGA 182
Query: 306 LIEGRQVHSLVIKMGSE--RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMI 363
+ G +++S IK ++ + ++L++MY K G+ ++AR + D++ K+ +T+MI
Sbjct: 183 VQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMI 242
Query: 364 MGYAQSGRGLEALELFDRLLT-----ERELTPDHIYFTAILTACNHAGFLEKG 411
GYA +G+ E+LELF ++ T + +TP+ + F +L AC+H+G +E+G
Sbjct: 243 FGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEG 295
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 177/385 (45%), Gaps = 27/385 (7%)
Query: 25 LRHLHAFPVSDAKNFLCRQFFIKKFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAK 84
LRHLH+ V + + F K N + ++ ++ +AL L +R
Sbjct: 5 LRHLHSLGVINKFDSFLLHFHTKSLKS----NHTLKQYLESGEPIKAL--LDFRHRFRQS 58
Query: 85 PS-----KSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIV 139
PS + +SS KA + G QIHA + + G+ + + ++LV FY+ +
Sbjct: 59 PSFVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVD 117
Query: 140 DARKVF-RAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC 198
AR+VF + + V WT++I+ ++ N +A LFK M I+ + +T +SAC
Sbjct: 118 YARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSAC 177
Query: 199 VGQKDALQHCSTLHAHVVKRGFRTSNFVIC--SLVDCYANCKQIDDSLLLLNETSEKDTI 256
A+Q +++ +KR R + + SL++ Y + + + L +E+ KD
Sbjct: 178 -ADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVT 236
Query: 257 VYNSMISAYSQNLCSGDALQLFVEMR------QKKFSPTDHTLCTILNACSSLASLIEG- 309
Y SMI Y+ N + ++L+LF +M+ +P D T +L ACS + EG
Sbjct: 237 TYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK 296
Query: 310 RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMIMGYAQ 368
R S+++ + +VD++ + G + +A ++Q +K N V+W T++ +
Sbjct: 297 RHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSL 356
Query: 369 SGRGLEALELFDRLLTERELTPDHI 393
G E+ R+ EL DH+
Sbjct: 357 HGNVELGEEVQRRIF---ELDRDHV 378
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 267 QNLCSGDALQLFVEMRQK-----KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
Q L SG+ ++ ++ R + F + L I + + AS ++GRQ+H+LV K+G
Sbjct: 37 QYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGF 96
Query: 322 ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN-VLWTTMIMGYAQSGRGLEALELFD 380
+ + ++LV YS GD+D AR V D+T K N VLWT MI Y ++ +EA+ELF
Sbjct: 97 NAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFK 156
Query: 381 RLLTERELTPDHIYFTAILTACNHAGFLEKG 411
R+ E+ + D + T L+AC G ++ G
Sbjct: 157 RMEAEK-IELDGVIVTVALSACADLGAVQMG 186
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 175/372 (47%), Gaps = 46/372 (12%)
Query: 78 MNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV-------D 130
+N L K K L L SC+ + + IH +L+R+ ++F++S L+
Sbjct: 6 LNTLRFKHPKLAL---LQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDST 59
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
F + A +F ++ + + LI FS + AF + +ML + I P+ T
Sbjct: 60 FNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNIT 119
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK------------ 238
+I A + L T H+ +V+ GF+ +V SLV YANC
Sbjct: 120 FPFLIKASSEMECVLVGEQT-HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM 178
Query: 239 -------------------QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFV 279
++++ + +E ++ ++ MI+ Y++N C A+ LF
Sbjct: 179 GFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 238
Query: 280 EMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGG 339
M+++ + + +++++C+ L +L G + + V+K N+ + +ALVDM+ + G
Sbjct: 239 FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCG 298
Query: 340 DIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAIL 399
DI++A V + +++ W+++I G A G +A+ F ++++ P + FTA+L
Sbjct: 299 DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMIS-LGFIPRDVTFTAVL 357
Query: 400 TACNHAGFLEKG 411
+AC+H G +EKG
Sbjct: 358 SACSHGGLVEKG 369
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 163/370 (44%), Gaps = 35/370 (9%)
Query: 63 SKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNL 122
S A +A T M + P + + ++ +G Q H+ +VR G+++++
Sbjct: 93 STGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDV 152
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE---- 178
++ ++LV YA C I A ++F M D VSWTS++AG+ G +A +F E
Sbjct: 153 YVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHR 212
Query: 179 -------MLGTHIKPNCF--------------------TLTSVISACVGQKDALQHCSTL 211
M+ + K NCF + SVIS+C AL+
Sbjct: 213 NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSC-AHLGALEFGERA 271
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCS 271
+ +VVK + + +LVD + C I+ ++ + E D++ ++S+I + + +
Sbjct: 272 YEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHA 331
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK-MGSERNVFVASA 330
A+ F +M F P D T +L+ACS + +G +++ + K G E +
Sbjct: 332 HKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGC 391
Query: 331 LVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTP 390
+VDM + G + EA + + VK N ++G + + E E +L ++ P
Sbjct: 392 IVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLI--KVKP 449
Query: 391 DHIYFTAILT 400
+H + +L+
Sbjct: 450 EHSGYYVLLS 459
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 133/305 (43%), Gaps = 38/305 (12%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I ++KN ++A+DL M R +++V+ + +SSCA G + + Y+V+S
Sbjct: 221 INGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHM 280
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
NL L +ALVD + +C I A VF + D +SW+S+I G + +G A F +
Sbjct: 281 TVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQ 340
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M+ P T T+V+SAC H +V++G ++ Y N K
Sbjct: 341 MISLGFIPRDVTFTAVLSACS------------HGGLVEKG-----------LEIYENMK 377
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+ + E Y ++ + +A ++M K +P L +L
Sbjct: 378 K--------DHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP---ILGALLG 426
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGD---IDEARFVLDQTSVKN 355
AC + +V +++IK+ E + + L ++Y+ G I+ R ++ + VK
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYV-LLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 356 NVLWT 360
W+
Sbjct: 486 PPGWS 490
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 38/293 (12%)
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC---VGQKDALQHCST 210
VSWTS I + NG+ +A F +M ++PN T +++S C +AL
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALG--DL 94
Query: 211 LHAHVVKRGFRTSNFVICS--------------------------------LVDCYANCK 238
LH + K G ++ ++ + ++D Y
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
Q+D++ + ++ E+D I + +MI+ + + +AL F EM+ P + LN
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL 358
AC++L +L G VH V+ + NV V+++L+D+Y + G ++ AR V + V
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
W ++I+G+A +G E+L F R + E+ PD + FT LTAC+H G +E+G
Sbjct: 275 WNSVIVGFAANGNAHESLVYF-RKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 111 AYLVRSGYED-NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQG 169
A LV ED N + ++D Y + + +A K+F M D +SWT++I GF G
Sbjct: 128 ARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQ 187
Query: 170 RDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS 229
+A L F+EM + +KP+ + + ++AC AL +H +V+ + F+ + V S
Sbjct: 188 EEALLWFREMQISGVKPDYVAIIAALNACT-NLGALSFGLWVHRYVLSQDFKNNVRVSNS 246
Query: 230 LVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
L+D Y C ++ + + ++ + +NS+I ++ N + ++L F +M++K F P
Sbjct: 247 LIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPD 306
Query: 290 DHTLCTILNACSSLASLIEG-RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
T L ACS + + EG R + + LVD+YS+ G +++A ++
Sbjct: 307 AVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLV 366
Query: 349 DQTSVKNN 356
+K N
Sbjct: 367 QSMPMKPN 374
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
K + AL M KP + AL++C GL +H Y++ +++N+
Sbjct: 183 KKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVR 242
Query: 124 LSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
+S++L+D Y +C + AR+VF M+ VSW S+I GF+ANG ++ + F++M
Sbjct: 243 VSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG 302
Query: 184 IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICS------------LV 231
KP+ T T ++AC H +V+ G R + C LV
Sbjct: 303 FKPDAVTFTGALTACS------------HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLV 350
Query: 232 DCYANCKQIDDSLLLLNETSEK-DTIVYNSMISAYSQN 268
D Y+ +++D+L L+ K + +V S+++A S +
Sbjct: 351 DLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 248 NETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI 307
N+++ + T+ + S I+ ++N +A + F +M P T +L+ C S
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 308 E--GRQVHSLVIKMGSERN-VFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIM 364
E G +H K+G +RN V V +A++ MYSK G +AR V D KN+V W TMI
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 365 GYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
GY +SG+ A ++FD+ + ER+L I +TA++ GF++KG
Sbjct: 149 GYMRSGQVDNAAKMFDK-MPERDL----ISWTAMIN-----GFVKKG 185
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 156/314 (49%), Gaps = 15/314 (4%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ------VSWTSLIA 161
QIHA L+R+ N S F ++ + R + + +V Q ++I
Sbjct: 29 QIHALLLRTSLIRN---SDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIR 85
Query: 162 GFSANGQGRDAFLLFKEML-GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF 220
FS + + F LF+ + + + N + + + C+ D L +H + GF
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQ-IHGKIFSDGF 144
Query: 221 RTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE 280
+ + ++ +L+D Y+ C+ D+ + +E ++DT+ +N + S Y +N + D L LF +
Sbjct: 145 LSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDK 204
Query: 281 MRQKK---FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK 337
M+ P T L AC++L +L G+QVH + + G + +++ LV MYS+
Sbjct: 205 MKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSR 264
Query: 338 GGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTA 397
G +D+A V +N V WT +I G A +G G EA+E F+ +L + ++P+ T
Sbjct: 265 CGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML-KFGISPEEQTLTG 323
Query: 398 ILTACNHAGFLEKG 411
+L+AC+H+G + +G
Sbjct: 324 LLSACSHSGLVAEG 337
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 155/335 (46%), Gaps = 12/335 (3%)
Query: 38 NFLCRQFFIKKFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCT-ALSS 96
N+ CR F + + N I S + + L + R ++ P+ + + AL
Sbjct: 63 NYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKC 122
Query: 97 CAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSW 156
C K+ + GLQIH + G+ + L + L+D Y+ C DA KVF + D VSW
Sbjct: 123 CIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSW 182
Query: 157 TSLIAGFSANGQGRDAFLLFKEM---LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
L + + N + RD +LF +M + +KP+ T + AC AL +H
Sbjct: 183 NVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQAC-ANLGALDFGKQVHD 241
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
+ + G + + +LV Y+ C +D + + E++ + + ++IS + N +
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 274 ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGR----QVHSLVIKMGSERNVFVAS 329
A++ F EM + SP + TL +L+ACS + EG ++ S K+ + N+
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKI--KPNLHHYG 359
Query: 330 ALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTTMI 363
+VD+ + +D+A ++ +K ++ +W T++
Sbjct: 360 CVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLL 394
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 169/389 (43%), Gaps = 70/389 (17%)
Query: 90 LCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVF---- 145
+ T + AK N G Q+H LV++G + F S+L+ Y+KC + +F
Sbjct: 128 VTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSC 187
Query: 146 ------------------------------RAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
R +++D +SW +LIAG++ NG +A +
Sbjct: 188 VEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
M +K + + +V++ K +L+ +HA V+K G ++ FV +VD Y
Sbjct: 248 AVSMEENGLKWDEHSFGAVLNVLSSLK-SLKIGKEVHARVLKNGSYSNKFVSSGIVDVYC 306
Query: 236 NCKQID-------------------------------DSLLLLNETSEKDTIVYNSMISA 264
C + ++ L + SEK+ +V+ +M
Sbjct: 307 KCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLG 366
Query: 265 YSQNLCSGDALQLFVE--MRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE 322
Y NL D++ + + +P + ++L ACS A + G+++H ++ G
Sbjct: 367 Y-LNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGIL 425
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ + +A VDMYSK G+++ A + D + ++ V++ MI G A G ++ + F+
Sbjct: 426 MDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFED- 484
Query: 383 LTERELTPDHIYFTAILTACNHAGFLEKG 411
+TE PD I F A+L+AC H G + +G
Sbjct: 485 MTEGGFKPDEITFMALLSACRHRGLVLEG 513
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 162/363 (44%), Gaps = 71/363 (19%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH-DQVSWTSLIAGFS-ANGQGRDAFLLF 176
E N++ +A++ Y K + +AR++F + D +++ +L++GF+ +G +A +F
Sbjct: 51 ERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMF 110
Query: 177 KEMLGTH---IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
EM I + FT+T+++ + + LH +VK G + F + SL+
Sbjct: 111 GEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVF-YGEQLHGVLVKTGNDGTKFAVSSLIHM 169
Query: 234 YANCKQ---------------------------------IDDSLLLLNETSE-KDTIVYN 259
Y+ C + ID +L + E DTI +N
Sbjct: 170 YSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWN 229
Query: 260 SMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM 319
++I+ Y+QN +AL++ V M + +H+ +LN SSL SL G++VH+ V+K
Sbjct: 230 TLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKN 289
Query: 320 GSERNVFVASALVDMYSKGGDID-------------------------------EARFVL 348
GS N FV+S +VD+Y K G++ EA+ +
Sbjct: 290 GSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLF 349
Query: 349 DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
D S KN V+WT M +GY + LEL + TPD + ++L AC+ ++
Sbjct: 350 DSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYM 409
Query: 409 EKG 411
E G
Sbjct: 410 EPG 412
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 146/324 (45%), Gaps = 38/324 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I +++N + AL + M K + L+ + ++ +G ++HA +++
Sbjct: 229 NTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLK 288
Query: 116 SGYEDNLFLSSALVDFYAKC----FA---------------------------IVDARKV 144
+G N F+SS +VD Y KC +A +V+A+++
Sbjct: 289 NGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRL 348
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK-PNCFTLTSVISACVGQKD 203
F ++ + V WT++ G+ Q L + + P+ + SV+ AC Q
Sbjct: 349 FDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQA- 407
Query: 204 ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMIS 263
++ +H H ++ G ++ + VD Y+ C ++ + + + + E+DT++YN+MI+
Sbjct: 408 YMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIA 467
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIK---MG 320
+ + + Q F +M + F P + T +L+AC ++EG + +I+ +
Sbjct: 468 GCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNIS 527
Query: 321 SERNVFVASALVDMYSKGGDIDEA 344
E + + ++D+Y K +D+A
Sbjct: 528 PETGHY--TCMIDLYGKAYRLDKA 549
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 42/234 (17%)
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
L+ + +++R + N VI + V + N K+ + L ++ E+D I YN+++S
Sbjct: 39 LREARNVFDEMLERNVYSWNAVIAAYVK-FNNVKEARE--LFESDNCERDLITYNTLLSG 95
Query: 265 YSQ-NLCSGDALQLFVEMRQKKFSPT---DHTLCTILNACSSLASLIEGRQVHSLVIKMG 320
+++ + C +A+++F EM +K+ D T+ T++ + L ++ G Q+H +++K G
Sbjct: 96 FAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTG 155
Query: 321 SERNVFVASALVDMYSK---------------------------------GGDIDEARFV 347
++ F S+L+ MYSK GDID+A V
Sbjct: 156 NDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSV 215
Query: 348 LDQTSVKNNVL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILT 400
+ N+ + W T+I GYAQ+G EAL++ + E L D F A+L
Sbjct: 216 FWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS-MEENGLKWDEHSFGAVLN 268
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 82 TAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDA 141
T P V+ + L +C+ G +IH + +R+G + L +A VD Y+KC + A
Sbjct: 388 TNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYA 447
Query: 142 RKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQ 201
++F + D V + ++IAG + +G +F F++M KP+ T +++SAC +
Sbjct: 448 ERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHR 507
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN--ETSEKDTIVYN 259
L+ + + ++D Y ++D ++ L+ + EKD ++
Sbjct: 508 GLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILG 567
Query: 260 SMISAYSQN 268
+ ++A S N
Sbjct: 568 AFLNACSWN 576
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 37/347 (10%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++NA + ++ M RL KP + L S +K LG +HA ++
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ + + F+ +LVD YAK GQ + AF +
Sbjct: 155 NFVDCDSFVRLSLVDMYAK-------------------------------TGQLKHAFQV 183
Query: 176 FKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYA 235
F+E K + +I+ KD + +TL + +R + + +L+ Y
Sbjct: 184 FEESPDRIKKESILIWNVLINGYCRAKD-MHMATTLFRSMPERNSGSWS----TLIKGYV 238
Query: 236 NCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
+ +++ + L EK+ + + ++I+ +SQ A+ + EM +K P ++T+
Sbjct: 239 DSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAA 298
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN 355
+L+ACS +L G ++H ++ G + + + +ALVDMY+K G++D A V + K+
Sbjct: 299 VLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKD 358
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
+ WT MI G+A GR +A++ F +++ E PD + F A+LTAC
Sbjct: 359 ILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE-KPDEVVFLAVLTAC 404
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 6/260 (2%)
Query: 99 KARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTS 158
+A++ H+ L RS E N S L+ Y + A+++F M + VSWT+
Sbjct: 208 RAKDMHMA----TTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTT 263
Query: 159 LIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKR 218
LI GFS G A + EML +KPN +T+ +V+SAC + AL +H +++
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC-SKSGALGSGIRIHGYILDN 322
Query: 219 GFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLF 278
G + + +LVD YA C ++D + + + + KD + + +MI ++ + A+Q F
Sbjct: 323 GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCF 382
Query: 279 VEMRQKKFSPTDHTLCTILNACSSLASLIEGRQ-VHSLVIKMGSERNVFVASALVDMYSK 337
+M P + +L AC + + + G S+ + E + +VD+ +
Sbjct: 383 RQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGR 442
Query: 338 GGDIDEARFVLDQTSVKNNV 357
G ++EA +++ + ++
Sbjct: 443 AGKLNEAHELVENMPINPDL 462
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I S+ + A+ M KP++ + LS+C+K+ G++IH Y++ +G
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
+ + + +ALVD YAKC + A VF M D +SWT++I G++ +G+ A F++
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQ 384
Query: 179 MLGTHIKPNCFTLTSVISACVGQKD 203
M+ + KP+ +V++AC+ +
Sbjct: 385 MMYSGEKPDEVVFLAVLTACLNSSE 409
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 120/293 (40%), Gaps = 74/293 (25%)
Query: 186 PNCFTLTSVISACVGQKD--ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
P+ S+I AC KD +L+H +HA +++RG +S V LV C + K D S
Sbjct: 27 PDESHFISLIHAC---KDTASLRH---VHAQILRRGVLSSR-VAAQLVSCSSLLKSPDYS 79
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL 303
L + + E++ V N++I ++N +++ F+ M + P T +L + S L
Sbjct: 80 LSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL 139
Query: 304 ASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT------------ 351
GR +H+ +K + + FV +LVDMY+K G + A V +++
Sbjct: 140 GFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 352 -----------------------SVKNNVLWTTMIMGYAQSGRGLEALELFDRL------ 382
+N+ W+T+I GY SG A +LF+ +
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 383 ------------------------LTERELTPDHIYFTAILTACNHAGFLEKG 411
+ E+ L P+ A+L+AC+ +G L G
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG 312
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 149/349 (42%), Gaps = 61/349 (17%)
Query: 107 LQIHAYLVRSG-YEDNLFL------------SSALVDFYAKCFAIVDARKVFRAMKVHDQ 153
Q+HA L+ SG + D+ + SS V Y + A VF+A V
Sbjct: 39 FQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCANPVFKAYLV--- 95
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
+ + A + ++L P+ +T S+IS C+ + + H
Sbjct: 96 ------------SSSPKQALGFYFDILRFGFVPDSYTFVSLIS-CIEKTCCVDSGKMCHG 142
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQID-----------------DSLL----------- 245
+K G V SL+ Y C +D +S++
Sbjct: 143 QAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLA 202
Query: 246 ---LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
L +E +K+ I +N MISAY G ++ LF EM + F + TL +LNAC
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTM 362
A L EGR VH+ +I+ +V + +AL+DMY K ++ AR + D S++N V W M
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVM 322
Query: 363 IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
I+ + GR LELF+ ++ L PD + F +L C AG + +G
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGM-LRPDEVTFVGVLCGCARAGLVSQG 370
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 141/335 (42%), Gaps = 37/335 (11%)
Query: 65 NASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFL 124
++S +AL + R P + +S K G H ++ G + L +
Sbjct: 96 SSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPV 155
Query: 125 SSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGR-------------- 170
++L+ Y C A+ A+K+F + D VSW S+IAG NG
Sbjct: 156 QNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNI 215
Query: 171 -------DAFL----------LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
A+L LF+EM+ + N TL +++AC G+ L+ ++HA
Sbjct: 216 ISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNAC-GRSARLKEGRSVHA 274
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGD 273
+++ +S + +L+D Y CK++ + + + S ++ + +N MI A+ +
Sbjct: 275 SLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEG 334
Query: 274 ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI-KMGSERNVFVASALV 332
L+LF M P + T +L C+ + +G+ +SL++ + + N +
Sbjct: 335 GLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMA 394
Query: 333 DMYSKGGDIDEARFVL----DQTSVKNNVLWTTMI 363
++YS G +EA L D+ + W ++
Sbjct: 395 NLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLL 429
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 164/353 (46%), Gaps = 40/353 (11%)
Query: 98 AKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDF-YAKCFAIVDARKVFRAMKVHDQVSW 156
+K+R+ + Q+ ++++ SG + FL L+ F + + AR +F + +
Sbjct: 32 SKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLY 91
Query: 157 TSLIAGFSANG--QGRDAFLLFKEMLGTHI-KPNCFTLTSVISACVGQKDALQHCSTLHA 213
+++ +S++ AF F+ M+ + +PN F V+ + A +H
Sbjct: 92 AAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFS-TPLVHT 150
Query: 214 HVVKRGFRTSNFVICSLVDCYAN-CKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSG 272
H+ K GF V +L+ YA+ I + L +E SE++ + + +M+S Y+++
Sbjct: 151 HLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIS 210
Query: 273 DALQLFVEMRQK--------------------------------KFSPTDHTLCTILNAC 300
+A+ LF +M ++ P + T+ +L+AC
Sbjct: 211 NAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSAC 270
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWT 360
+ +L + +H+ + +VFV+++LVD+Y K G+++EA V S K+ W
Sbjct: 271 AQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWN 330
Query: 361 TMIMGYAQSGRGLEALELFDRL--LTERELTPDHIYFTAILTACNHAGFLEKG 411
+MI +A GR EA+ +F+ + L ++ PDHI F +L AC H G + KG
Sbjct: 331 SMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKG 383
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 146/324 (45%), Gaps = 39/324 (12%)
Query: 78 MNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFA 137
+NR +P+ + L S + +H +L +SG+ + + +AL+ YA +
Sbjct: 117 VNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVS 176
Query: 138 -IVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG--------------- 181
I AR++F M + VSWT++++G++ +G +A LF++M
Sbjct: 177 HITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQ 236
Query: 182 -----------------THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
I+PN T+ V+SAC Q LQ +HA +R +
Sbjct: 237 NGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSAC-AQTGTLQLAKGIHAFAYRRDLSSDV 295
Query: 225 FVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQ- 283
FV SLVD Y C ++++ + S+K +NSMI+ ++ + S +A+ +F EM +
Sbjct: 296 FVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKL 355
Query: 284 --KKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI-KMGSERNVFVASALVDMYSKGGD 340
P T +LNAC+ + +GR L+ + G E + L+D+ + G
Sbjct: 356 NINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGR 415
Query: 341 IDEARFVLDQTSVK-NNVLWTTMI 363
DEA V+ +K + +W +++
Sbjct: 416 FDEALEVMSTMKMKADEAIWGSLL 439
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 28/203 (13%)
Query: 78 MNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFA 137
+N + +P++ + LS+CA+ L IHA+ R ++F+S++LVD Y KC
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 138 IVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH---IKPNCFTLTSV 194
+ +A VF+ +W S+I F+ +G+ +A +F+EM+ + IKP+ T +
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 195 ISACVGQKDALQHCSTLHAHVVKRG-----FRTSNFVICS-------LVDCYANCKQIDD 242
++AC H +V +G T+ F I L+D + D+
Sbjct: 371 LNACT------------HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDE 418
Query: 243 SLLLLNETSEK-DTIVYNSMISA 264
+L +++ K D ++ S+++A
Sbjct: 419 ALEVMSTMKMKADEAIWGSLLNA 441
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 11/225 (4%)
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD-CYANCKQIDDSLLLLNE 249
L ISA + + L H + + ++ G S+F+ L+ C + + + +
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 250 TSEKDTIVYNSMISAYSQNLC--SGDALQLFVEMRQKKFSPTDHTLCT-ILNACSSLASL 306
S +T +Y ++++AYS +L + A F M + +H + +L + L+S
Sbjct: 83 FSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA 142
Query: 307 IEGRQVHSLVIKMGSERNVFVASALVDMY-SKGGDIDEARFVLDQTSVKNNVLWTTMIMG 365
VH+ + K G V V +AL+ Y S I AR + D+ S +N V WT M+ G
Sbjct: 143 FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSG 202
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG-FLE 409
YA+SG A+ LF+ + ER++ + AIL AC G FLE
Sbjct: 203 YARSGDISNAVALFED-MPERDVPS----WNAILAACTQNGLFLE 242
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 185/425 (43%), Gaps = 78/425 (18%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N +T +N ++A + M PS+ V+ + ++ K + G++ L
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAM------PSRDVV--SWNAMIKGYIENDGMEEAKLLFG 224
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
E N+ +++V Y + + +A ++F M + VSWT++I+GF+ N R+A +L
Sbjct: 225 DMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALML 284
Query: 176 FKEMLG--THIKPNCFTLTSVISACVGQKDALQHCST-LHAHVVKRGFRTSNF---VICS 229
F EM + PN TL S+ AC G + LHA V+ G+ T + + S
Sbjct: 285 FLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKS 344
Query: 230 LVDCYANCKQIDDSLLLLNET------------------------------SEKDTIVYN 259
LV YA+ I + LLNE+ S D + +
Sbjct: 345 LVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWT 404
Query: 260 SMISAY-------------------------------SQNLCSGDALQLFVEMRQKKFSP 288
SMI Y QN +A L +M + P
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGS--ERNVFVASALVDMYSKGGDIDEARF 346
+ T +L++ + ++L +G+ +H ++ K + + ++ + ++LV MY+K G I++A
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 347 VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
+ + K+ V W +MIMG + G +AL LF +L + P+ + F +L+AC+H+G
Sbjct: 525 IFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK-KPNSVTFLGVLSACSHSG 583
Query: 407 FLEKG 411
+ +G
Sbjct: 584 LITRG 588
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 60/323 (18%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E N+ +A++ Y KC + +A +FR M + VSWT ++ +G+ DA LF E
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDE 163
Query: 179 MLGTHIKPNCFTLTSVISA-----------CVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
M ++ +T +I + +D + + + ++ G + +
Sbjct: 164 MPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLF 223
Query: 228 -----------CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQ 276
S+V Y + ++ L E E++ + + +MIS ++ N +AL
Sbjct: 224 GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALM 283
Query: 277 LFVEMRQK--KFSPTDHTLCTILNACSSLASLIE--GRQVHSLVIKMGSE---RNVFVAS 329
LF+EM++ SP TL ++ AC L G Q+H+ VI G E + +A
Sbjct: 284 LFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAK 343
Query: 330 ALVDMYS-----------------------------KGGDIDEARFVLDQT-SVKNNVLW 359
+LV MY+ K GD++ A + ++ S+ + V W
Sbjct: 344 SLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSW 403
Query: 360 TTMIMGYAQSGRGLEALELFDRL 382
T+MI GY ++G A LF +L
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKL 426
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 23/267 (8%)
Query: 143 KVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQK 202
K+ + ++ V WTSL++ ++ G +A +LF+ M +I C + + C
Sbjct: 67 KIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNI-VTCNAMLTGYVKCRRMN 125
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMI 262
+A + +VV + ++ +L D + +D++ L +E E++ + +N+++
Sbjct: 126 EAWTLFREMPKNVV-----SWTVMLTALCDD----GRSEDAVELFDEMPERNVVSWNTLV 176
Query: 263 SAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE--GRQVHSLVIKMG 320
+ +N A Q+F M + +++ + + IE G + L+
Sbjct: 177 TGLIRNGDMEKAKQVFDAMPSRD----------VVSWNAMIKGYIENDGMEEAKLLFGDM 226
Query: 321 SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFD 380
SE+NV +++V Y + GD+ EA + + +N V WT MI G+A + EAL LF
Sbjct: 227 SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFL 286
Query: 381 RLLTERE-LTPDHIYFTAILTACNHAG 406
+ + + ++P+ ++ AC G
Sbjct: 287 EMKKDVDAVSPNGETLISLAYACGGLG 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Query: 202 KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSM 261
+ L H L + +RG SL+ YA +D++ +L E++ + N+M
Sbjct: 55 EGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAM 114
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSL-VIKMG 320
++ Y + +A LF EM + S T +L A +GR ++ +
Sbjct: 115 LTGYVKCRRMNEAWTLFREMPKNVVSWT-----VMLTALCD-----DGRSEDAVELFDEM 164
Query: 321 SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFD 380
ERNV + LV + GD+++A+ V D ++ V W MI GY ++ G+E +L
Sbjct: 165 PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIEND-GMEEAKLLF 223
Query: 381 RLLTERELT 389
++E+ +
Sbjct: 224 GDMSEKNVV 232
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 159/337 (47%), Gaps = 39/337 (11%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANG 167
Q+HA+ +R+G ++ L L+ +V ARK+F + + LI + +
Sbjct: 6 QLHAHCLRTGVDETKDLLQRLLLIPN----LVYARKLFDHHQNSCTFLYNKLIQAYYVHH 61
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
Q ++ +L+ + ++P+ T + I A + + LH+ + GF + +F
Sbjct: 62 QPHESIVLYNLLSFDGLRPSHHTF-NFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAY---------------------- 265
+L+ YA + + + +E S++D V+N+MI+ Y
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 266 ---------SQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSL 315
SQN +AL++F+ M + K P T+ ++L AC++L L GR++
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 316 VIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVL-WTTMIMGYAQSGRGLE 374
+ G N++V +A ++MYSK G ID A+ + ++ + N+ W +MI A G+ E
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDE 300
Query: 375 ALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
AL LF ++L E E PD + F +L AC H G + KG
Sbjct: 301 ALTLFAQMLREGE-KPDAVTFVGLLLACVHGGMVVKG 336
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 48/296 (16%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVF----------------------- 145
+H+ RSG+E + F + L+ YAK A+ AR+VF
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 146 --RAMKVHDQV------SWTSLIAGFSANGQGRDAFLLFKEM-LGTHIKPNCFTLTSVIS 196
AM++ D + SWT++I+GFS NG +A +F M +KPN T+ SV+
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 223
Query: 197 ACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNE-TSEKDT 255
AC + L+ L + + GF + +V + ++ Y+ C ID + L E ++++
Sbjct: 224 ACANLGE-LEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNL 282
Query: 256 IVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGR----- 310
+NSMI + + + +AL LF +M ++ P T +L AC +++G+
Sbjct: 283 CSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKS 342
Query: 311 --QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN-VLWTTMI 363
+VH + K+ ++D+ + G + EA ++ +K + V+W T++
Sbjct: 343 MEEVHKISPKLEH------YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLL 392
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Query: 59 ITKHSKNASTDRALDLLTGMNR-LTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG 117
I+ S+N + AL + M + + KP+ + + L +CA +G ++ Y +G
Sbjct: 186 ISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENG 245
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQV-SWTSLIAGFSANGQGRDAFLLF 176
+ DN+++ +A ++ Y+KC I A+++F + + SW S+I + +G+ +A LF
Sbjct: 246 FFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLF 305
Query: 177 KEMLGTHIKPNCFTLTSVISACV 199
+ML KP+ T ++ ACV
Sbjct: 306 AQMLREGEKPDAVTFVGLLLACV 328
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 171/380 (45%), Gaps = 44/380 (11%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKP-SKSVLCTALSSCAKARNWHLGLQIHAYLVRSG 117
++ ++ + ++AL+L M+ A P V AL SCA A LG +HA+ V+S
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFK 177
+ N F+ AL+D Y KC ++ ARK+F + + V W ++I+ ++ G+ ++A L++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 178 EM----------------LGTH-----------------IKPNCFTLTSVISACVGQKDA 204
M +GT KPN TL +++SAC A
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC-SAIGA 197
Query: 205 LQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISA 264
+ +H++ + + LV+ Y C I L+ + ++D + ++S+ISA
Sbjct: 198 FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISA 257
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
Y+ + + AL+ F EM K +P D +L ACS A L + V+ +M +
Sbjct: 258 YALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSH-AGLADEALVY--FKRMQGDYG 314
Query: 325 VFVA----SALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFD 380
+ + S LVD+ S+ G +EA V+ K ++G ++ +E E+
Sbjct: 315 LRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAA 374
Query: 381 R--LLTERELTPDHIYFTAI 398
R L+ E E +++ I
Sbjct: 375 RELLMVEPENPANYVLLGKI 394
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 135/292 (46%), Gaps = 36/292 (12%)
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKP-NCFTLTSVISACVGQKDALQHCSTLH 212
+S T ++ ++ G A LF +M + P + + + +C + S +H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGS-VH 71
Query: 213 AHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYS------ 266
AH VK F ++ FV C+L+D Y C + + L +E +++ +V+N+MIS Y+
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 267 ----------------------QNLCSGD-----ALQLFVEMRQKKFSPTDHTLCTILNA 299
+ L + A++ + +M + +F P TL +++A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLW 359
CS++ + +++HS + E + + S LV+ Y + G I + V D ++ V W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 360 TTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+++I YA G AL+ F + + +TPD I F +L AC+HAG ++
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAK-VTPDDIAFLNVLKACSHAGLADEA 302
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 129/249 (51%), Gaps = 10/249 (4%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEML----- 180
+++V+ YAK I DARK+F M + +SW+ LI G+ G+ ++A LF+EM
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 181 GTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
++PN FT+++V+SAC G+ AL+ +HA++ K + +L+D YA C +
Sbjct: 192 EAFVRPNEFTMSTVLSAC-GRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Query: 241 DDSLLLLNE-TSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILN 298
+ + + N S+KD Y++MI + + + QLF EM +P T IL
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 299 ACSSLASLIEGRQVHSLVI-KMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
AC + EG+ ++I + G ++ +VD+Y + G I EA + ++ +V
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 370
Query: 358 L-WTTMIMG 365
L W +++ G
Sbjct: 371 LIWGSLLSG 379
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 6/189 (3%)
Query: 229 SLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKK--- 285
S+V+ YA IDD+ L +E E++ I ++ +I+ Y +AL LF EM+ K
Sbjct: 133 SVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNE 192
Query: 286 --FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDE 343
P + T+ T+L+AC L +L +G+ VH+ + K E ++ + +AL+DMY+K G ++
Sbjct: 193 AFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLER 252
Query: 344 ARFVLDQTSVKNNV-LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
A+ V + K +V ++ MI A G E +LF + T + P+ + F IL AC
Sbjct: 253 AKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC 312
Query: 403 NHAGFLEKG 411
H G + +G
Sbjct: 313 VHRGLINEG 321
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 71 ALDLLTGM-----NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLS 125
ALDL M N +P++ + T LS+C + G +HAY+ + E ++ L
Sbjct: 178 ALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLG 237
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVHDQV-SWTSLIAGFSANGQGRDAFLLFKEMLGT-H 183
+AL+D YAKC ++ A++VF A+ V +++++I + G + F LF EM + +
Sbjct: 238 TALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN 297
Query: 184 IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
I PN T ++ ACV + + S + + G S +VD Y I ++
Sbjct: 298 INPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEA 357
Query: 244 L-LLLNETSEKDTIVYNSMISAYSQ----NLCSGDALQLFVEM 281
+ + E D +++ S++S C G AL+ +E+
Sbjct: 358 ESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEG-ALKRLIEL 399
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 254 DTIVYNSMISAYSQNLCSGD---ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGR 310
++ ++N +I A N+ S + +++ MR + SP HT +L + + L G+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 311 QVHSLVIKMGSERNVFVASALVDMYSKGGD------------------------------ 340
+ H+ ++ G +++ FV ++L++MYS GD
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 341 -IDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL----LTERELTPDHIYF 395
ID+AR + D+ +N + W+ +I GY G+ EAL+LF + E + P+
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 396 TAILTACNHAGFLEKG 411
+ +L+AC G LE+G
Sbjct: 203 STVLSACGRLGALEQG 218
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 129/295 (43%), Gaps = 43/295 (14%)
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
E N+ L +++++ Y +V AR+ F D V W ++I+G+ G +A LF +
Sbjct: 56 EKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQ 115
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
M C +D + + L YAN
Sbjct: 116 M-----------------PC---RDVMSWNTVLEG--------------------YANIG 135
Query: 239 QIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTIL 297
++ + ++ E++ +N +I Y+QN + L F M + P D T+ +L
Sbjct: 136 DMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVL 195
Query: 298 NACSSLASLIEGRQVHSLVIKMGSER-NVFVASALVDMYSKGGDIDEARFVLDQTSVKNN 356
+AC+ L + G+ VH +G + +V V +AL+DMY K G I+ A V ++
Sbjct: 196 SACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDL 255
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ W TMI G A G G EAL LF + ++PD + F +L AC H G +E G
Sbjct: 256 ISWNTMINGLAAHGHGTEALNLFHE-MKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Query: 56 NDCITKHSKNASTDRALDLLTGM-NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I +++N L M + + P+ + + LS+CAK + G +H Y
Sbjct: 156 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGE 215
Query: 115 RSGYED-NLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAF 173
GY ++ + +AL+D Y KC AI A +VF+ +K D +SW ++I G +A+G G +A
Sbjct: 216 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEAL 275
Query: 174 LLFKEMLGTHIKPNCFTLTSVISAC 198
LF EM + I P+ T V+ AC
Sbjct: 276 NLFHEMKNSGISPDKVTFVGVLCAC 300
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGT-HI 184
+ +++ YA + +VF M + SW LI G++ NG+ + FK M+ +
Sbjct: 125 NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSV 184
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNF-VICSLVDCYANCKQIDDS 243
PN T+T V+SAC + A +H + G+ + V +L+D Y C I+ +
Sbjct: 185 VPNDATMTLVLSAC-AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL 303
+ + +D I +N+MI+ + + +AL LF EM+ SP T +L AC +
Sbjct: 244 MEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHM 303
Query: 304 ASLIEG-RQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK-NNVLWTT 361
+ +G +S+ + +VD+ S+ G + +A +++ VK + V+W T
Sbjct: 304 GLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWAT 363
Query: 362 MI 363
++
Sbjct: 364 LL 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 249 ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC--TILNACSSLASL 306
E EK+ +++ SMI+ Y N L R SP + T+++ + ++
Sbjct: 53 EMVEKNVVLWTSMINGYLLNK------DLVSARRYFDLSPERDIVLWNTMISGYIEMGNM 106
Query: 307 IEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGY 366
+E R SL +M R+V + +++ Y+ GD++ V D +N W +I GY
Sbjct: 107 LEAR---SLFDQMPC-RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGY 162
Query: 367 AQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
AQ+GR E L F R++ E + P+ T +L+AC G + G
Sbjct: 163 AQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG 207
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 149/334 (44%), Gaps = 37/334 (11%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I S + + ++++ + M R P + S ++ N LG +H +V+
Sbjct: 77 NFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVK 136
Query: 116 SGYEDNLFLSSALV-------------------------------DFYAKCFAIVDARKV 144
SG E +LF+ + L+ D YAK +V AR V
Sbjct: 137 SGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLV 196
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEM--LGTHIKPNCFTLTSVISACVGQK 202
F M D V+W+S+I G+ G+ A +F +M +G+ K N T+ SVI AC
Sbjct: 197 FDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS-KANEVTMVSVICAC-AHL 254
Query: 203 DALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS--EKDTIVYNS 260
AL T+H +++ + + SL+D YA C I D+ + S E D +++N+
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 261 MISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMG 320
+I + + ++LQLF +MR+ K P + T +L ACS + E + + G
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESG 374
Query: 321 SERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+E + +VD+ S+ G + +A + + +K
Sbjct: 375 AEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIK 408
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 153/340 (45%), Gaps = 40/340 (11%)
Query: 108 QIHAYLVRSGY-EDNLFLSSALVDFYAKCFAIVD-ARKVFRAMKVHDQVSWTSLIAGFSA 165
+IH L+ G E+ F+S L VD A K + W +I GFS
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 166 NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNF 225
+ + ++ +ML + P+ T ++ + + + +LH VVK G F
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSS-SRLSNRKLGGSLHCSVVKSGLEWDLF 144
Query: 226 VIC--------------------------------SLVDCYANCKQIDDSLLLLNETSEK 253
IC S++D YA + + L+ +E SE+
Sbjct: 145 -ICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSER 203
Query: 254 DTIVYNSMISAYSQNLCSGDALQLFVEM-RQKKFSPTDHTLCTILNACSSLASLIEGRQV 312
D + ++SMI Y + AL++F +M R + T+ +++ AC+ L +L G+ V
Sbjct: 204 DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTV 263
Query: 313 HSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN--VLWTTMIMGYAQSG 370
H ++ + V + ++L+DMY+K G I +A V + SVK ++W +I G A G
Sbjct: 264 HRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
Query: 371 RGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
E+L+LF ++ E ++ PD I F +L AC+H G +++
Sbjct: 324 FIRESLQLFHKM-RESKIDPDEITFLCLLAACSHGGLVKE 362
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 94/203 (46%), Gaps = 31/203 (15%)
Query: 240 IDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNA 299
+D + L++ S+ +N +I +S + ++ ++++M + P T ++ +
Sbjct: 58 VDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKS 117
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALV--------------------------- 332
S L++ G +H V+K G E ++F+ + L+
Sbjct: 118 SSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTW 177
Query: 333 ----DMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTEREL 388
D Y+K GD+ AR V D+ S ++ V W++MI GY + G +ALE+FD+++
Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 237
Query: 389 TPDHIYFTAILTACNHAGFLEKG 411
+ + +++ AC H G L +G
Sbjct: 238 KANEVTMVSVICACAHLGALNRG 260
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQ-----------------------IDDSLLLLN 248
HA + K G+ T ++ S V Y C + I +SL+ +
Sbjct: 53 HAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIG 112
Query: 249 ET----------SEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQ-KKFSPTDHTLCTIL 297
E+ S+++ I +N MI Y +N+ +AL+ M P + + L
Sbjct: 113 ESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSL 172
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV 357
AC+ L L + VHSL+I G E N ++SALVD+Y+K GDI +R V +
Sbjct: 173 AACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVS 232
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+W MI G+A G EA+ +F + E ++PD I F +LT C+H G LE+G
Sbjct: 233 IWNAMITGFATHGLATEAIRVFSEMEAE-HVSPDSITFLGLLTTCSHCGLLEEG 285
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 4/226 (1%)
Query: 141 ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG-THIKPNCFTLTSVISACV 199
A+KV R + ++W +I G+ N Q +A K ML T IKPN F+ S ++AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 200 GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYN 259
D L H +H+ ++ G + + +LVD YA C I S + D ++N
Sbjct: 177 RLGD-LHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 260 SMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKM 319
+MI+ ++ + + +A+++F EM + SP T +L CS L EG++ L+ +
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 320 GS-ERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN-VLWTTMI 363
S + + A+VD+ + G + EA +++ ++ + V+W +++
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 16/218 (7%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLT-AKPSKSVLCTALSSCAKARNWHLGLQIHAYLV 114
N I + +N + AL L M T KP+K ++L++CA+ + H +H+ ++
Sbjct: 133 NLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMI 192
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFL 174
SG E N LSSALVD YAKC I +R+VF ++K +D W ++I GF+ +G +A
Sbjct: 193 DSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIR 252
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI------- 227
+F EM H+ P+ T +++ C HC L G + F I
Sbjct: 253 VFSEMEAEHVSPDSITFLGLLTTC-------SHCGLLEEGKEYFGLMSRRFSIQPKLEHY 305
Query: 228 CSLVDCYANCKQIDDSLLLLNETS-EKDTIVYNSMISA 264
++VD ++ ++ L+ E D +++ S++S+
Sbjct: 306 GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 21/216 (9%)
Query: 211 LHAHVVKRGF-RTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNL 269
+H V K GF S + +L+ YA + + + +E E+ ++ +N+MI Y +
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK 192
Query: 270 CSGD-----ALQLFVEMRQKKFS-------PTDHTLCTILNACSSLASLIEGRQVHSLVI 317
G+ A+ LF ++FS PTD T+ +L+A S L G VH +
Sbjct: 193 DKGNHNARKAMVLF-----RRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 318 KMG--SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEA 375
K+G E +VF+ +ALVDMYSK G ++ A V + VKN WT+M G A +GRG E
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNET 307
Query: 376 LELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
L +R + E + P+ I FT++L+A H G +E+G
Sbjct: 308 PNLLNR-MAESGIKPNEITFTSLLSAYRHIGLVEEG 342
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 83 AKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY--EDNLFLSSALVDFYAKCFAIVD 140
+P+ + + LS+ ++ +G +H Y+ + G+ E ++F+ +ALVD Y+KC + +
Sbjct: 216 VRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNN 275
Query: 141 ARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA 197
A VF MKV + +WTS+ G + NG+G + L M + IKPN T TS++SA
Sbjct: 276 AFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 33/269 (12%)
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDA-LQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
F EM + P+ T V AC +K+ L TLH ++ G + F + +L+
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 234 YANCKQIDDSLLLLNETSEKDTIVYN-------------------------------SMI 262
Y+ ID +L L +E ++D + YN S+I
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 263 SAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE 322
S Y+Q +A++LF EM P + + + L+AC+ +G+ +H +
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 323 RNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
+ F+A+ LVD Y+K G ID A + + S K W MI G A G G ++ F ++
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM 341
Query: 383 LTERELTPDHIYFTAILTACNHAGFLEKG 411
++ + PD + F ++L C+H+G +++
Sbjct: 342 VSS-GIKPDGVTFISVLVGCSHSGLVDEA 369
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 8/229 (3%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
+ L+D K IV AR++F +M + D VSW SLI+G++ R+A LF EM+ +K
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL 245
P+ + S +SAC Q Q +H + ++ +F+ LVD YA C ID ++
Sbjct: 247 PDNVAIVSTLSAC-AQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAME 305
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
+ S+K +N+MI+ + + + F +M P T ++L CS
Sbjct: 306 IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGL 365
Query: 306 LIEGR----QVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
+ E R Q+ SL R + + D+ + G I+EA +++Q
Sbjct: 366 VDEARNLFDQMRSL---YDVNREMKHYGCMADLLGRAGLIEEAAEMIEQ 411
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ +++ A+ L M L KP + + LS+CA++ +W G IH Y R
Sbjct: 218 NSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR 277
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL 175
+ FL++ LVDFYAKC I A ++F +W ++I G + +G G
Sbjct: 278 KRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDY 337
Query: 176 FKEMLGTHIKPNCFTLTSVISAC 198
F++M+ + IKP+ T SV+ C
Sbjct: 338 FRKMVSSGIKPDGVTFISVLVGC 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 49/254 (19%)
Query: 205 LQHCSTLHAHVVKRGFRTSN------------FVICSLVDCYANCKQI-DDSLLLLNETS 251
L+H HA + G R SN F I S+ + K++ + + +
Sbjct: 17 LKHLHQFHAQFITSG-RISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFIT 75
Query: 252 EKDTIVYNSMISAYS-QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC---------- 300
T +N++I + S + + FVEMR++ P HT + AC
Sbjct: 76 NPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTL 135
Query: 301 --------------SSLASLIEGRQVHSLVIKMGS---------ERNVFVASALVDMYSK 337
S L +L +V+SL+ + S +R+V + L+D K
Sbjct: 136 VKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVK 195
Query: 338 GGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTA 397
+I AR + D +++ V W ++I GYAQ EA++LFD ++ L PD++ +
Sbjct: 196 AREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVA-LGLKPDNVAIVS 254
Query: 398 ILTACNHAGFLEKG 411
L+AC +G +KG
Sbjct: 255 TLSACAQSGDWQKG 268
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 38/292 (13%)
Query: 156 WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHV 215
+ +LI + G+ + + LF ML +H++PN T S+I A ++ + LH
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAAC-SSFSVSYGVALHGQA 112
Query: 216 VKRGFRTSNFVICSLVDCYANC-------KQIDD----------SLL------------- 245
+KRGF FV S V Y K DD SLL
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 246 -LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKK---FSPTDHTLCTILNACS 301
D + + ++I+ +S+ AL +F EM Q + +P + T ++L++C+
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 302 SL--ASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLW 359
+ + G+Q+H V+ + +AL+DMY K GD++ A + DQ K W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 360 TTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+I A +GR +ALE+F+ ++ + P+ I AILTAC + ++ G
Sbjct: 293 NAIISALASNGRPKQALEMFE-MMKSSYVHPNGITLLAILTACARSKLVDLG 343
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 144/340 (42%), Gaps = 43/340 (12%)
Query: 48 KFSGKTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGL 107
++ K N I + +L L T M +P+ + + + + + G+
Sbjct: 47 RWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGV 106
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVF---------------------- 145
+H ++ G+ + F+ ++ V FY + + +RK+F
Sbjct: 107 ALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNG 166
Query: 146 ---------RAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH---IKPNCFTLTS 193
+ M V D VSWT++I GFS G A ++F EM+ I PN T S
Sbjct: 167 EMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 194 VISACVG-QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSE 252
V+S+C + ++ +H +V+ + + + +L+D Y ++ +L + ++ +
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD 286
Query: 253 KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV 312
K +N++ISA + N AL++F M+ P TL IL AC+ + G Q+
Sbjct: 287 KKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Query: 313 HSLVIKMGSERNVFVASA----LVDMYSKGG-DIDEARFV 347
S + SE + S +VD+ + G +D A F+
Sbjct: 347 FSSIC---SEYKIIPTSEHYGCVVDLIGRAGLLVDAANFI 383
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 42/332 (12%)
Query: 117 GYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQV---------------------- 154
G+E ++++ +ALV Y ++DA KVF M + V
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 155 ---------SWTSLIAGFSANGQGRDAFLLFKEMLGTH-IKPNCFTLTSVISACVGQKDA 204
SWT++I G++ + ++A LLF M+ IKPN T+ +++ A D
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD- 271
Query: 205 LQHCSTLHAHVVKRGFRTSNF-VICSLVDCYANCKQIDDSLLLLNE--TSEKDTIVYNSM 261
L+ C ++HA+V KRGF + V SL+D YA C I + E K+ + + +M
Sbjct: 272 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 331
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS--SLASLIEGRQVHSLVIKM 319
ISA++ + +A+ +F +M + P T+ ++LNACS LA +++V +
Sbjct: 332 ISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEY 391
Query: 320 GSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELF 379
+V LVDM + G ++EA + + ++ + M++G E E
Sbjct: 392 KITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERV 451
Query: 380 DRLLTERELT--PDHIYFTAILTACNHAGFLE 409
R L E E + D++ + I C FL+
Sbjct: 452 TRKLMELERSHGGDYVLMSNIF--CGTGRFLD 481
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 217 KRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQ 276
+R T N +I L N + +L L + + + + ++I Y++ +A+
Sbjct: 186 ERNPVTWNVMITGL----TNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAIL 241
Query: 277 LFVEMRQ-KKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER-NVFVASALVDM 334
LF M P + T+ IL A +L L VH+ V K G ++ V ++L+D
Sbjct: 242 LFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDA 301
Query: 335 YSKGGDIDEA-RFVLD-QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTER-ELTPD 391
Y+K G I A +F ++ KN V WTTMI +A G G EA+ +F + ER L P+
Sbjct: 302 YAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM--ERLGLKPN 359
Query: 392 HIYFTAILTACNHAGFLEK 410
+ ++L AC+H G E+
Sbjct: 360 RVTMISVLNACSHGGLAEE 378
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 66 ASTDRALDLLTGMNRLTA----KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYED- 120
A D+ + + +R+ A KP++ + L + + + +HAY+ + G+
Sbjct: 231 ARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPC 290
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMK--VHDQVSWTSLIAGFSANGQGRDAFLLFKE 178
++ ++++L+D YAKC I A K F + + VSWT++I+ F+ +G G++A +FK+
Sbjct: 291 DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKD 350
Query: 179 MLGTHIKPNCFTLTSVISAC 198
M +KPN T+ SV++AC
Sbjct: 351 MERLGLKPNRVTMISVLNAC 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 42/208 (20%)
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQ--------KKFSPTD-HTLC 294
LLL + + ++N ++ YS A L+ ++++ K P D T
Sbjct: 66 LLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYL 125
Query: 295 TILNACSS--LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS 352
+L A S+ SL+ G +H L +K+G E +V+V +ALV MY GG++ +A V D+
Sbjct: 126 FLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMP 185
Query: 353 VKNNVL-------------------------------WTTMIMGYAQSGRGLEALELFDR 381
+N V WTT+I GYA+ + EA+ LF R
Sbjct: 186 ERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSR 245
Query: 382 LLTERELTPDHIYFTAILTACNHAGFLE 409
++ + P+ I AIL A + G L+
Sbjct: 246 MVACDAIKPNEITILAILPAVWNLGDLK 273
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 155/362 (42%), Gaps = 26/362 (7%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I + + + + +LL M + S T + + + I ++ SG
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFL 174
N+ + + L+ + + DA +V + MK D + SLI G S + +A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKD---------ALQHCSTLHAHVVKRGFRTSNF 225
EM+ +KPN FT + IS + + ++ C L V+ G
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 226 VICSLVD-CYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
+++ C A +D +L D Y +++ +N DA ++F EMR K
Sbjct: 569 KKGKVIEACSAYRSMVDQGIL-------GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
+P + ++N S L ++ + + +++ G NV + + L+ + + G+I++A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 345 RFVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILT 400
+ +LD+ SVK N V + T+I GY +SG EA LFD + + L PD +T ++
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL-KGLVPDSFVYTTLVD 740
Query: 401 AC 402
C
Sbjct: 741 GC 742
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 165/406 (40%), Gaps = 57/406 (14%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I SK D A L M KP+ +S +A + + +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRD 171
G N L + L++ Y K +++A +R+M + D ++T L+ G N + D
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
A +F+EM G I P+ F+ +I+ + +Q S++ +V+ G + + L+
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLING-FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 232 DCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
+ +I+ + LL+E S K + + Y ++I Y ++ +A +LF EM+ K
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 288 PTDHTLCTILNACSSL------------------ASLIEGRQVHSLVIKMG--------- 320
P T+++ C L +S + + V K G
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 321 -----------SERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN----NVLWTTMIMG 365
+ N + ++D K G+++ A+ + Q N + +T+++ G
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Query: 366 YAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
Y + GR E +FD + + PDHI ++ I+ A FL++G
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAG-IEPDHIMYSVIINA-----FLKEG 889
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 123/306 (40%), Gaps = 14/306 (4%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
KN D A ++ M P ++ +K N I +V G N+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 124 LSSALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEM 179
+ + L+ + + I A+++ M V + V++ ++I G+ +G +AF LF EM
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 180 LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQ 239
+ P+ F T+++ C D + + + K+G +S +L++ +
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN--KKGCASSTAPFNALINWVFKFGK 781
Query: 240 IDDSLLLLNET--------SEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
+ +LN + + + YN MI + A +LF +M+ PT
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 292 TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT 351
T ++LN + E V I G E + + S +++ + K G +A ++DQ
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 352 SVKNNV 357
KN V
Sbjct: 902 FAKNAV 907
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 159/355 (44%), Gaps = 19/355 (5%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
D AL + M P +L T +S K L++ + G+ + S+AL
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 129 VDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
+ + + +A ++ + + V D+VS+ +LI+G + +AF+ EM+ +
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
KP+ +T + +I + ++ + G + ++D ++ ++
Sbjct: 572 KPDNYTYSILICGLFNM-NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 245 LLLNETSEKD----TIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
+E K+ T+VYN +I AY ++ AL+L +M+ K SP T +++
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK----NN 356
S ++ + E + + + G E NVF +AL+D Y K G + + +L + K N
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ +T MI GYA+ G EA L + + E+ + PD I + + G+L++G
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNE-MREKGIVPDSITYKEFIY-----GYLKQG 799
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 151/370 (40%), Gaps = 70/370 (18%)
Query: 88 SVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRA 147
S+L L+ + + + L+ + + G+ N+ + + L+D + ++A + +A
Sbjct: 334 SILVKGLTRAKRIGDAYFVLK---EMTKKGFPPNVIVYNNLID------SFIEAGSLNKA 384
Query: 148 MKVHDQV----------SWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVI-- 195
+++ D + ++ +LI G+ NGQ +A L KEML N + TSVI
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 196 ----------------------SACVGQKDAL--------QHCSTLHA--HVVKRGF--- 220
S G L +H L + +GF
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 221 -RTSNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDAL 275
RTSN ++ L C A ++D++ + E + D + YN++IS +A
Sbjct: 505 TRTSNALLHGL--CEAG--KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 276 QLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMY 335
EM ++ P ++T ++ ++ + E Q + G +V+ S ++D
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 336 SKGGDIDEARFVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPD 391
K +E + D+ K N V++ +I Y +SGR ALEL + + + ++P+
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED-MKHKGISPN 679
Query: 392 HIYFTAILTA 401
+T+++
Sbjct: 680 SATYTSLIKG 689
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 138/328 (42%), Gaps = 16/328 (4%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDA--- 141
P + TA+++ K +++ + + +G N+ + ++D C +A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 142 --RKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACV 199
+ V R M+ ++++ L+ G + + DA+ + KEM PN ++I + +
Sbjct: 318 KEKMVERGME-PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 200 GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIV-- 257
+ +L + +V +G ++ +L+ Y Q D++ LL E V
Sbjct: 377 -EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 258 --YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSL 315
+ S+I +L AL+ EM + SP L T+++ + ++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 316 VIKMGSERNVFVASALVDMYSKGGDIDEA----RFVLDQTSVKNNVLWTTMIMGYAQSGR 371
+ G + ++AL+ + G +DEA + +L + V + V + T+I G +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 372 GLEALELFDRLLTERELTPDHIYFTAIL 399
EA D ++ +R L PD+ ++ ++
Sbjct: 556 LDEAFMFLDEMV-KRGLKPDNYTYSILI 582
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 159/355 (44%), Gaps = 19/355 (5%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
D AL + M P +L T +S K L++ + G+ + S+AL
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 129 VDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
+ + + +A ++ + + V D+VS+ +LI+G + +AF+ EM+ +
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
KP+ +T + +I + ++ + G + ++D ++ ++
Sbjct: 572 KPDNYTYSILICGLFNM-NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 245 LLLNETSEKD----TIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
+E K+ T+VYN +I AY ++ AL+L +M+ K SP T +++
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK----NN 356
S ++ + E + + + G E NVF +AL+D Y K G + + +L + K N
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 357 VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ +T MI GYA+ G EA L + + E+ + PD I + + G+L++G
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNE-MREKGIVPDSITYKEFIY-----GYLKQG 799
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 151/370 (40%), Gaps = 70/370 (18%)
Query: 88 SVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRA 147
S+L L+ + + + L+ + + G+ N+ + + L+D + ++A + +A
Sbjct: 334 SILVKGLTRAKRIGDAYFVLK---EMTKKGFPPNVIVYNNLID------SFIEAGSLNKA 384
Query: 148 MKVHDQV----------SWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVI-- 195
+++ D + ++ +LI G+ NGQ +A L KEML N + TSVI
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 196 ----------------------SACVGQKDAL--------QHCSTLHA--HVVKRGF--- 220
S G L +H L + +GF
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 221 -RTSNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDAL 275
RTSN ++ L C A ++D++ + E + D + YN++IS +A
Sbjct: 505 TRTSNALLHGL--CEAG--KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 276 QLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMY 335
EM ++ P ++T ++ ++ + E Q + G +V+ S ++D
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 336 SKGGDIDEARFVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPD 391
K +E + D+ K N V++ +I Y +SGR ALEL + + + ++P+
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED-MKHKGISPN 679
Query: 392 HIYFTAILTA 401
+T+++
Sbjct: 680 SATYTSLIKG 689
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 138/328 (42%), Gaps = 16/328 (4%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDA--- 141
P + TA+++ K +++ + + +G N+ + ++D C +A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 142 --RKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACV 199
+ V R M+ ++++ L+ G + + DA+ + KEM PN ++I + +
Sbjct: 318 KEKMVERGME-PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 200 GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIV-- 257
+ +L + +V +G ++ +L+ Y Q D++ LL E V
Sbjct: 377 -EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 258 --YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSL 315
+ S+I +L AL+ EM + SP L T+++ + ++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 316 VIKMGSERNVFVASALVDMYSKGGDIDEA----RFVLDQTSVKNNVLWTTMIMGYAQSGR 371
+ G + ++AL+ + G +DEA + +L + V + V + T+I G +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 372 GLEALELFDRLLTERELTPDHIYFTAIL 399
EA D ++ +R L PD+ ++ ++
Sbjct: 556 LDEAFMFLDEMV-KRGLKPDNYTYSILI 582
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 15/318 (4%)
Query: 73 DLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFY 132
D+L M+ L+ ++ + A+ + ++ ++++S + + L+ +
Sbjct: 74 DILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMH 133
Query: 133 AKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLT 192
C + R++F M D SW + G G DA LF ML H + F +
Sbjct: 134 VSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSML-KHSQKGAFKIP 192
Query: 193 SVISACVGQKDAL----QHCSTLHAHVVKRGF--RTSNFVICSLVDCYANCKQIDDSLLL 246
S I CV + A+ + +HA K GF +++ SL+ Y + ++D+ L+
Sbjct: 193 SWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLV 252
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLA-S 305
L++ S +T+ + + ++ + + ++ F+EM +L ACS ++
Sbjct: 253 LHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDG 312
Query: 306 LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL----DQTSVKNNVLWTT 361
G+QVH+ IK+G E + + L++MY K G + +A V D+TSV W
Sbjct: 313 GRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVS---CWNA 369
Query: 362 MIMGYAQSGRGLEALELF 379
M+ Y Q+G +EA++L
Sbjct: 370 MVASYMQNGIYIEAIKLL 387
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 7/213 (3%)
Query: 89 VLCTALSSCAKARNWHLGLQIHAYLVRSGY--EDNLFLSSALVDFYAKCFAIVDARKVFR 146
+L L +CA R++ LG Q+HA + G+ E++ +LS +L+ FY + + DA V
Sbjct: 195 ILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLH 254
Query: 147 AMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQ 206
+ + V+W + + G+ ++ F EM IK N ++V+ AC D +
Sbjct: 255 QLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGR 314
Query: 207 HCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTI-VYNSMISAY 265
+HA+ +K GF + + C L++ Y ++ D+ + + ++ ++ +N+M+++Y
Sbjct: 315 SGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASY 374
Query: 266 SQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
QN +A++L +M+ D T+LN
Sbjct: 375 MQNGIYIEAIKLLYQMKATGIKAHD----TLLN 403
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 165/372 (44%), Gaps = 43/372 (11%)
Query: 74 LLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYA 133
+LT MNR + T + K N+H L +HA ++R G L+ +++ + +
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG------LTPSVITYTS 350
Query: 134 KCFAIVDARKVFRAMKVHDQV----------SWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
++ A + RAM+ DQ+ ++T+L+ GFS G +A+ + +EM
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 184 IKPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD 242
P+ T ++I+ CV K ++ + + ++G +++ + +D+
Sbjct: 411 FSPSVVTYNALINGHCVTGK--MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 243 SLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILN 298
+L + E EK DTI Y+S+I + + + +A L+ EM + P + T ++N
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 299 ACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL----DQTSVK 354
A L + Q+H+ +++ G +V S L++ +K EA+ +L + SV
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 355 NNVLWTT---------------MIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAIL 399
++V + T +I G+ G EA ++F+ +L + PD + ++
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH-KPDGTAYNIMI 647
Query: 400 TACNHAGFLEKG 411
AG + K
Sbjct: 648 HGHCRAGDIRKA 659
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 140/324 (43%), Gaps = 14/324 (4%)
Query: 100 ARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH----DQVS 155
A N + L + + G N+ + L+D Y K I D K+ R+M + + +S
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277
Query: 156 WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHV 215
+ +I G G+ ++ + EM + T ++I + + +HA +
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN-FHQALVMHAEM 336
Query: 216 VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCS 271
++ G S SL+ ++ ++ L++ + + Y +++ +SQ
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASAL 331
+A ++ EM FSP+ T ++N + + V + + G +V S +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 332 VDMYSKGGDIDEA----RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERE 387
+ + + D+DEA R ++++ + + ++++I G+ + R EA +L++ +L
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML-RVG 515
Query: 388 LTPDHIYFTAILTACNHAGFLEKG 411
L PD +TA++ A G LEK
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKA 539
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 14/245 (5%)
Query: 175 LFKEMLGTHIKPNCFTLTSVISA-C-VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD 232
+FKEML + + PN FT +I C G D TL + +G + +L+D
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDV---ALTLFDKMETKGCLPNVVTYNTLID 248
Query: 233 CYANCKQIDDSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSP 288
Y ++IDD LL + E + I YN +I+ + + + EM ++ +S
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
+ T T++ + + +H+ +++ G +V ++L+ K G+++ A L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 349 DQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
DQ V+ N +TT++ G++Q G EA + R + + +P + + A++
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL-REMNDNGFSPSVVTYNALINGHCV 427
Query: 405 AGFLE 409
G +E
Sbjct: 428 TGKME 432
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 14/356 (3%)
Query: 68 TDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSA 127
D A+DL M + PS LS+ AK + L + + + G +L+ S
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 128 LVDFYAK----CFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
++ + + A+ K+ + D V+ +SL+ G+ + + DA L +M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 184 IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
KP+ FT T++I A + + L +V+RG + ++V+ ID +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVA-LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 244 LLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNA 299
L LL + E D ++YN++I + DAL LF EM K P T ++++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT---SVKNN 356
+ + ++ S +I+ NV SAL+D + K G + EA + D+ S+ +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 357 VL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ ++++I G+ R EA +F+ L+ ++ P+ + ++ ++ A +E+G
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 161/354 (45%), Gaps = 19/354 (5%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
A+ L+ M + +P T ++ K + L L + + + E ++ + + ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 130 DFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
D K + DA +F M D +++SLI+ G+ DA L +M+ I
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL- 244
PN T +++I A V ++ L L+ ++KR F SL++ + ++D++
Sbjct: 326 PNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 245 ---LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
L++++ + + Y+++I + + + ++LF EM Q+ T T+++
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV---LDQTSVKNNVL 358
+ V ++ +G N+ + L+D K G + +A V L +++++ ++
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 359 -WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ MI G ++G+ + ELF L+ + ++P+ I + +++ GF KG
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCN-LSLKGVSPNVIAYNTMIS-----GFCRKG 552
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 169/404 (41%), Gaps = 50/404 (12%)
Query: 44 FFIKKFSGKTFENDCITKHSKN-ASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARN 102
F+++ FSG ++ I+ + N D A++L M + PS LS+ AK
Sbjct: 37 FWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNK 96
Query: 103 WHLGLQIHAYLVRSGYEDNLFLSSALVDFYAK----CFAIVDARKVFRAMKVHDQVSWTS 158
+ L + + + G NL+ S L++ + + A+ K+ + D V+ S
Sbjct: 97 FDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS 156
Query: 159 LIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKR 218
L+ GF + DA L +M+ +P+ FT ++I A + + + VVK
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK- 215
Query: 219 GFRTSNFVICSLVDCYANCKQIDDSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDA 274
G + +V+ ID +L LL + E ++YN++I A DA
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 275 LQLFVEMRQK-----------------------------------KFSPTDHTLCTILNA 299
L LF EM K K +P T +++A
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR----FVLDQTSVKN 355
L+E +++ +IK + ++F S+L++ + +DEA+ ++ + N
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAIL 399
V + T+I G+ ++ R E +ELF R +++R L + + +T ++
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELF-REMSQRGLVGNTVTYTTLI 438
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 159/358 (44%), Gaps = 22/358 (6%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCT---ALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLS 125
+RA + + ++R+ K + L T ++ K + L L + + + E + +
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+ ++D + DA +F M + V++ SLI G+ DA L +M+
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
I PN T +++I A V ++ L L+ ++KR F SL++ + ++D
Sbjct: 320 RKINPNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 242 DSL----LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
++ L++++ + + YN++I + + + ++LF EM Q+ T T++
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV---LDQTSVK 354
+ + V ++ G ++ S L+D G ++ A V L ++ ++
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 355 NNVL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ + MI G ++G+ + +LF L+ + + P+ + +T +++ GF KG
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVVTYTTMMS-----GFCRKG 550
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 148/311 (47%), Gaps = 22/311 (7%)
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM----KVHDQVSWTSLI 160
L L + +++ GYE ++ S+L++ Y I DA + M D +++T+LI
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 161 AGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD---ALQHCSTLHAHVVK 217
G + + +A L M+ +PN T V++ + D A + + A ++
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 218 RGFRTSNFVICS-LVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSG 272
+N VI S ++D + DD+L L E K + I Y+S+IS
Sbjct: 258 -----ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312
Query: 273 DALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALV 332
DA +L +M ++K +P T +++A L+E +++ +IK + ++F S+L+
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 333 DMYSKGGDIDEAR----FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTEREL 388
+ + +DEA+ ++ + N V + T+I G+ ++ R E +ELF R +++R L
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF-REMSQRGL 431
Query: 389 TPDHIYFTAIL 399
+ + +T ++
Sbjct: 432 VGNTVTYTTLI 442
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 156/354 (44%), Gaps = 19/354 (5%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
A+ L+ M + +P+ ++ K + L + + + E N+ + S ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 130 DFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
D K DA +F M+ + ++++SLI+ + DA L +M+ I
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL- 244
PN T ++I A V ++ L L+ ++KR F SL++ + ++D++
Sbjct: 328 PNVVTFNALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 245 ---LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
L++++ + + YN++I+ + + + ++LF EM Q+ T T+++
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD--QTSVKNNVLW 359
+ V ++ G N+ + L+D K G +++A V + Q S ++
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 360 T--TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
T MI G ++G+ + +LF L+ + + PD I + +++ GF KG
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPDVIIYNTMIS-----GFCRKG 554
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/285 (18%), Positives = 126/285 (44%), Gaps = 11/285 (3%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
D AL+L T M +P+ + +S W ++ + ++ N+ +AL
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 129 VDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
+D + K +V+A K++ M D +++SLI GF + + +A +F+ M+
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 185 KPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
PN T ++I+ C ++ + L + +RG + +L+ + + D++
Sbjct: 397 FPNVVTYNTLINGFCKAKR--IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 244 LL----LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNA 299
+ ++++ + + YN+++ +N A+ +F +++ K PT +T ++
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
+ +G + + G + +V + + ++ + + G +EA
Sbjct: 515 MCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 9/180 (5%)
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDAFLLF 176
N+ + L++ + K I + ++FR M V + V++T+LI GF +A ++F
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 177 KEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYAN 236
K+M+ + PN T +++ + + L+ + ++ + + + +++
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDG-LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 237 CKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
+++D L S K D I+YN+MIS + + +A LF +MR+ P T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 162/344 (47%), Gaps = 18/344 (5%)
Query: 78 MNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFA 137
M +L +PS L + L+ + + + + + G+ N+ + + +++ K
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 138 IVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTS 193
+ +A +VF M+ D V++ +LI+G S +G+ DA L ++M+ I PN T+
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 194 VISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD------CYANCKQIDDSLLLL 247
+I V + + L+ L+ +++R + F SL++ C + K + D L++
Sbjct: 260 LIDTFVKEGNLLE-ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD--LMV 316
Query: 248 NETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLI 307
++ D + YN++I+ + ++ D ++LF EM + T T+++ L
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 308 EGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV---LDQTSVKNNVL-WTTMI 363
++V + ++ G ++ + L+D G I++A + L ++ + +++ + +I
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 364 MGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGF 407
G ++ + EA LF R LT + + PD I + +++ G
Sbjct: 437 QGLCRTDKLKEAWCLF-RSLTRKGVKPDAIAYITMISGLCRKGL 479
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 125/267 (46%), Gaps = 12/267 (4%)
Query: 151 HDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA-CVGQKDALQHCS 209
HD S+T LI F + A L +M+ +P+ TL S+++ C G + Q
Sbjct: 112 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR--FQEAV 169
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAY 265
+L + GF + + ++++ + ++++L + +K D + YN++IS
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
Query: 266 SQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNV 325
S + DA +L +M ++K P +++ +L+E R ++ +I+ NV
Sbjct: 230 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV 289
Query: 326 FVASALVDMYSKGGDIDEARFVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDR 381
F ++L++ + G + +A+++ D K + V + T+I G+ +S R + ++LF
Sbjct: 290 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 382 LLTERELTPDHIYFTAILTACNHAGFL 408
+T + L D + ++ AG L
Sbjct: 350 -MTYQGLVGDAFTYNTLIHGYCQAGKL 375
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 120/283 (42%), Gaps = 43/283 (15%)
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD------------------------ALQ 206
DAF LF EML + P+ T V++ L
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 207 HC----------STLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSE---- 252
HC L ++K GFR S + SL++ + + +++ L++
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 253 KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV 312
+ ++YN++I+ +N +AL++F M +K T T+++ S+ + ++
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 313 HSLVIKMGSERNVFVASALVDMYSKGGDIDEAR----FVLDQTSVKNNVLWTTMIMGYAQ 368
++K + NV +AL+D + K G++ EAR ++ ++ V N + ++I G+
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 369 SGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
G +A +FD L+ + PD + + ++T + +E G
Sbjct: 302 HGCLGDAKYMFD-LMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 114/281 (40%), Gaps = 54/281 (19%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I KN + AL++ M + + T +S + + W ++ +V+
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAM----KVHDQVSWTSLIAGFSANGQGRD 171
+ N+ +AL+D + K +++AR +++ M V + ++ SLI GF +G D
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQK-------------------DALQHCSTLH 212
A +F M+ P+ T ++I+ K DA + + +H
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 213 AH-------VVKRGFRTSNFVICS----------LVDCYANCKQIDDSLLLLNETSEK-- 253
+ V ++ F + V C L+DC N +I+ +L+++ + +
Sbjct: 368 GYCQAGKLNVAQKVF--NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 254 --DTIVYNSMISAYSQNLCSGDALQ----LFVEMRQKKFSP 288
D I YN +I Q LC D L+ LF + +K P
Sbjct: 426 DVDIITYNIII----QGLCRTDKLKEAWCLFRSLTRKGVKP 462
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 161/370 (43%), Gaps = 52/370 (14%)
Query: 44 FFIKKFSG--KTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKAR 101
F+I+ FS K N N + ALDL T M PS LS AK
Sbjct: 43 FWIRAFSSYRKILRNGL-----HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMN 97
Query: 102 NWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK---VFRAMKV---HDQVS 155
+ + + + + G L + + + C + R + + MK+ D V+
Sbjct: 98 RYDVVISLFEQMQILGIPP--LLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVT 155
Query: 156 WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHV 215
+TSL+ G+ + DA LF ++LG KPN T T++I C+ + L H L +
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR-CLCKNRHLNHAVELFNQM 214
Query: 216 VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDAL 275
G S + + YN++++ + GDA
Sbjct: 215 GTNG-------------------------------SRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 276 QLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMY 335
L +M +++ P T +++A + L+E +++++++I+M +VF +L++
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 336 SKGGDIDEAR---FVLDQTS-VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPD 391
G +DEAR +++++ N V++TT+I G+ +S R + +++F ++++ + +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE-MSQKGVVAN 362
Query: 392 HIYFTAILTA 401
I +T ++
Sbjct: 363 TITYTVLIQG 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 114/289 (39%), Gaps = 9/289 (3%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
KN + A++L M ++P+ ++ + W + +++ E N+
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 124 LSSALVDFYAKCFAIVDARKVFRAM----KVHDQVSWTSLIAGFSANGQGRDAFLLFKEM 179
+AL+D + K +++A++++ M D ++ SLI G G +A +F M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 180 LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQ 239
PN T++I K ++ + + ++G + L+ Y +
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSK-RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 240 IDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
D + + N+ S + D YN ++ N AL +F MR+++ T
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
I+ L + + + + G + NV + ++ + + G I EA
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 138/296 (46%), Gaps = 16/296 (5%)
Query: 117 GYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDA 172
G + + + +++ Y K V + MK V+++V++T L+ NG+ DA
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 173 FLLFKEMLGTHIKPNCFTLTSVIS-ACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
LF EM I+ + TS+IS C +K ++ L + ++G S++ +L+
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNC--RKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 232 DCYANCKQIDDSLLLLNETSEKDT----IVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
D ++ + +L+NE K +V+N++I Y + +A ++ M QK F
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
T TI + + L E +Q +++ G + + + L+D+Y K G+++EA+ +
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 348 LDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAIL 399
+ S K N + + MI Y + G+ EA +L + + PD +T+++
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN-MEANGMDPDSYTYTSLI 546
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 154/362 (42%), Gaps = 47/362 (12%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK 143
KP T +++ K R++ + + + G N + L++ K + DA K
Sbjct: 256 KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 144 VFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC- 198
+F M+ D +TSLI+ G + AFLLF E+ + P+ +T ++I
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375
Query: 199 -VGQ--------------------------------KDALQHCSTLHAHVVKRGFRTSNF 225
VG+ K + S ++ + ++GF+ F
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Query: 226 VICSLVDCYANCKQIDDS---LLLLNETSEK-DTIVYNSMISAYSQNLCSGDALQLFVEM 281
++ C+ K+ D++ L + E K T+ Y ++I Y + +A +LFVEM
Sbjct: 436 TCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495
Query: 282 RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDI 341
K P T ++ A + E R++ + + G + + + ++L+ ++
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNV 555
Query: 342 DEARFVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTA 397
DEA + + +K N+V +T MI G +++G+ EA L+D + + T D+ +TA
Sbjct: 556 DEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDE-MKRKGYTIDNKVYTA 614
Query: 398 IL 399
++
Sbjct: 615 LI 616
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK-VFRAMKVH---DQVSWTSLIAGFS 164
I+ + + G++ ++F + + + + +A++ +FR M+ VS+T+LI +
Sbjct: 421 IYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYC 480
Query: 165 ANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSN 224
G +A LF EM ++PN T +I A Q ++ L A++ G +
Sbjct: 481 KEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ-GKIKEARKLRANMEANGMDPDS 539
Query: 225 FVICSLV--DCYANCKQIDDSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLF 278
+ SL+ +C A+ +D+++ L +E +++++ Y MIS S+ S +A L+
Sbjct: 540 YTYTSLIHGECIAD--NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLY 597
Query: 279 VEMRQKKFSPTDHTLCTILNACSS 302
EM++K ++ + ++ + S
Sbjct: 598 DEMKRKGYTIDNKVYTALIGSMHS 621
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 19/260 (7%)
Query: 103 WHLGLQIHAYLVRSGYEDN-----LFLSSA----LVDFYAKCFAIVDARKVFRAMKVHDQ 153
+ GL++ Y+V+ G + +FL +A +D C I R V +K+
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDL---CLEIF-RRMVDSGVKIT-V 224
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
S T ++ G G+ + L KE IKP +T ++I+A V Q+D +
Sbjct: 225 YSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD-FSGVEGVLK 283
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNL 269
+ K G + L++ ++ D+ L +E E+ D VY S+IS +
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
A LF E+ +K SP+ +T +++ + + + + + G V +
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 330 ALVDMYSKGGDIDEARFVLD 349
L+D Y + G +DEA + D
Sbjct: 404 TLIDGYCRKGMVDEASMIYD 423
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 165/369 (44%), Gaps = 19/369 (5%)
Query: 49 FSGKTFENDCITKHSKNA----STDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWH 104
FSG +++ K S+NA D A+DL M + PS LS+ AK + +
Sbjct: 24 FSGLSYDG-YREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD 82
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAK----CFAIVDARKVFRAMKVHDQVSWTSLI 160
L + + G NL+ + +++ + FA+ K+ + V+ SL+
Sbjct: 83 LVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL 142
Query: 161 AGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF 220
GF + +A L +M+ +P+ T T+++ A + + + VVK G
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GC 201
Query: 221 RTSNFVICSLVDCYANCKQIDDSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQ 276
+ ++++ + D +L LLN+ E D ++Y+++I + + DAL
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 277 LFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYS 336
LF EM K P T ++++ + + ++ S +++ NV ++L+D ++
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 337 KGGDIDEARFVLD---QTSVKNNVL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDH 392
K G + EA + D Q S+ N++ + ++I G+ R EA ++F L+ ++ PD
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF-TLMVSKDCLPDV 380
Query: 393 IYFTAILTA 401
+ + ++
Sbjct: 381 VTYNTLING 389
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 125/268 (46%), Gaps = 10/268 (3%)
Query: 152 DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTL 211
D V ++++I DA LF EM I+P+ FT +S+IS C+ S L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS-CLCNYGRWSDASRL 297
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQ 267
+ +++R + SL+D +A ++ ++ L +E ++ + + YNS+I+ +
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 268 NLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
+ +A Q+F M K P T T++N +++G ++ + + G N
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 328 ASALVDMYSKGGDIDEARFVLDQT---SVKNNVL-WTTMIMGYAQSGRGLEALELFDRLL 383
+ L+ + + D D A+ V Q V N++ + T++ G ++G+ +A+ +F+ L
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE-YL 476
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
+ ++ PD + + AG +E G
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 9/200 (4%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGF 163
QI +V ++ + L++ + K +VD ++FR M V + V++T+LI GF
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 164 SANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTS 223
+A ++FK+M+ + PN T +++ + + L+ + ++ K
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG-LCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 224 NFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFV 279
+ + + +++D L S K D I YN+MIS + + +A LF+
Sbjct: 485 IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544
Query: 280 EMRQKKFSPTDHTLCTILNA 299
+M++ P T T++ A
Sbjct: 545 KMKEDGPLPDSGTYNTLIRA 564
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 159/360 (44%), Gaps = 14/360 (3%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
++ + A+DL + M + PS LS+ K + + + + + + G ++L+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 124 LSSALVDFYAKCFAIVDARKVFRAM----KVHDQVSWTSLIAGFSANGQGRDAFLLFKEM 179
+ +++ + CF + A + M D+V+ SL+ GF + DA L +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 180 LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQ 239
+ KP+ ++I + K + + ++G R + +LV+ N +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTK-RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 240 IDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCT 295
D+ LL++ +K + I Y++++ A+ +N +A +LF EM + P T +
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 296 ILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTS--- 352
++N + E Q+ L++ G +V + L++ + K +++ + + S
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 353 -VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V N V + T+I G+ Q+G +A E F + + ++PD + +L G LEK
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ-MDFFGISPDIWTYNILLGGLCDNGELEKA 419
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 159/350 (45%), Gaps = 14/350 (4%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
AL +L M +L +P + + + ++ + + + +V GY+ ++ +A++D
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 131 FYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKP 186
K + DA F+ ++ + V++T+L+ G + + DA L +M+ I P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 187 NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL-- 244
N T ++++ A V L+ L +V+ SL++ +ID++
Sbjct: 259 NVITYSALLDAFVKNGKVLEA-KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 245 --LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
L++++ D + YN++I+ + + D ++LF EM Q+ T T++
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK----NNVL 358
+ + ++ S + G +++ + L+ G++++A + + + + V
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 359 WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
+TT+I G ++G+ EA LF L+ + L PD + +T +++ G L
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCS-LSLKGLKPDIVTYTTMMSGLCTKGLL 486
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 180/418 (43%), Gaps = 57/418 (13%)
Query: 31 FPVSDAKNFLCRQFFIKKFSGKTFEN--DCITKHSKNASTDRALDLLTGMNRLTAKPSKS 88
FP+S + CR+ + FSGKT + + + + D A+ L M + PS
Sbjct: 26 FPLSFS---FCRR---RAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSII 79
Query: 89 VLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDAR----KV 144
LS+ AK + L + + G NL+ + L++ + +C + A K+
Sbjct: 80 EFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM 139
Query: 145 FRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDA 204
+ D V+ SL+ GF + DA L +M+ KP+ T T++I A
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 199
Query: 205 LQHCSTLHAHVVKRGFRT----------------------------------SNFVICS- 229
+ + + +V+RG + +N VI S
Sbjct: 200 SEAVALID-RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 230 LVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKK 285
++D + DD+L L E K + I Y+S+IS DA +L +M ++K
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 286 FSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR 345
+P T +++A L++ +++ +IK + N+F S+L++ + + EA+
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 346 FVLD----QTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAIL 399
+L+ + + N V + T+I G+ ++ R + +ELF R +++R L + + +T ++
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF-REMSQRGLVGNTVTYTTLI 435
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 139/314 (44%), Gaps = 13/314 (4%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
A+ L+ M + +P ++ K + L L + + + E N+ + S ++
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 130 DFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
D K DA +F M+ + ++++SLI+ G+ DA L +M+ I
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL 245
PN T +++I A V +K L L+ ++KR + F SL++ + ++ ++
Sbjct: 321 PNLVTFSALIDAFV-KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 246 LLNETSEKD----TIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
+L KD + YN++I+ + + ++LF EM Q+ T T+++
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV---LDQTSVKNNVL 358
+ V ++ +G N+ + L+D K G + +A V L +++++ ++
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Query: 359 -WTTMIMGYAQSGR 371
+ MI G ++G+
Sbjct: 500 TYNIMIEGMCKAGK 513
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 156/384 (40%), Gaps = 51/384 (13%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
AL L+ M +P + L+ K+ N L L + + + ++ S ++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 130 DFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
D K + DA +F M++ D V+++SLI G +G+ D + +EM+G +I
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD--CYANC------ 237
P+ T +++I V ++ L L+ ++ RG SL+D C NC
Sbjct: 313 PDVVTFSALIDVFV-KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 238 ---------------------------KQIDDSLLLLNETSEK----DTIVYNSMISAYS 266
K++DD + L E S K +TI YN+++ +
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 267 QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVF 326
Q+ A +LF EM + P+ T +L+ L + ++ + K +
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 491
Query: 327 VASALVDMYSKGGDIDEARFV---LDQTSVKNNVL-WTTMIMGYAQSGRGLEALELFDRL 382
+ + ++ +D+A + L VK +V+ + MI G + G EA LF R
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF-RK 550
Query: 383 LTERELTPDHIYFTAILTACNHAG 406
+ E TPD + ++ A H G
Sbjct: 551 MKEDGCTPDDFTYNILIRA--HLG 572
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 152/360 (42%), Gaps = 14/360 (3%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I H + + +RA L+ M ++ T + + GL + L G+
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF 480
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMKV----HDQVSWTSLIAGFSANGQGRDAFL 174
+ L++ Y K I A +V R MK H+ +++ +I GF +AF
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
+F++M+ +KP+ ++ISA G + + T+ + K R + ++ Y
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIIHGY 599
Query: 235 ANCKQIDDSLLLLNETSEKDTI----VYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
A + SL + + + +N +I+ + A+++ EM S +
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANE 659
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
HT I+ +S+ + + + + G + ++F AL+ K G + A V +
Sbjct: 660 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 719
Query: 351 TSV----KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
S +N+ ++ +I G+A+ G EA +L ++ E + PD +T+ ++AC+ AG
Sbjct: 720 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE-GVKPDIHTYTSFISACSKAG 778
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 114/267 (42%), Gaps = 22/267 (8%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N+ I+ + DRA+ + M +L +P+ + AK+ + L++ + R
Sbjct: 558 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVS----------WTSLIAGFSA 165
G + + L++ +V+ R++ +A+++ D+++ +T ++ G+++
Sbjct: 618 CGCVPTVHTFNGLIN------GLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 166 NGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNF 225
G AF F + + + FT +++ AC + +Q + + R ++F
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC-KSGRMQSALAVTKEMSARNIPRNSF 730
Query: 226 VICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEM 281
V L+D +A + ++ L+ + ++ D Y S ISA S+ A Q EM
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 282 RQKKFSPTDHTLCTILNACSSLASLIE 308
P T T++ + ASL E
Sbjct: 791 EALGVKPNIKTYTTLIKGWAR-ASLPE 816
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 149/351 (42%), Gaps = 55/351 (15%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
AL LL M +L +PS L + L+ + + + +V GY
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR----------- 187
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
D +++T+LI G + + +A L M+ +PN T
Sbjct: 188 --------------------PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 191 LTSVISACVGQKD---ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLL 247
V++ + D AL + + A ++ N +++D + +DD+L L
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN----TIIDSLCKYRHVDDALNLF 283
Query: 248 NETSEK----DTIVYNSMISAYSQNLCS----GDALQLFVEMRQKKFSPTDHTLCTILNA 299
E K + + Y+S+IS LCS DA QL +M +KK +P T +++A
Sbjct: 284 KEMETKGIRPNVVTYSSLISC----LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR----FVLDQTSVKN 355
+E +++ +IK + ++F ++LV+ + +D+A+ F++ + +
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
V + T+I G+ +S R + ELF R ++ R L D + +T ++ H G
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELF-REMSHRGLVGDTVTYTTLIQGLFHDG 449
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 154/344 (44%), Gaps = 14/344 (4%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
A+ L+ M + +P+ ++ K + L L + + + E ++ + + ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 130 DFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
D K + DA +F+ M+ + V+++SLI+ + G+ DA L +M+ I
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL 245
PN T ++I A V ++ L+ ++KR F SLV+ + ++D +
Sbjct: 328 PNLVTFNALIDAFV-KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 246 LLNETSEKD----TIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
+ KD + YN++I + ++ D +LF EM + T T++
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD---QTSVKNNV- 357
++V ++ G ++ S L+D G +++A V D ++ +K ++
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
++TTMI G ++G+ + +LF L+ + + P+ + + +++
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCS-LSLKGVKPNVVTYNTMISG 549
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 143/348 (41%), Gaps = 15/348 (4%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
K TD AL+LL M + + T + S K R+ L + + G N+
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 124 LSSALVDFYAKCFAIVDARKVFRAM---KVHDQ-VSWTSLIAGFSANGQGRDAFLLFKEM 179
S+L+ DA ++ M K++ V++ +LI F G+ +A L+ +M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 180 LGTHIKPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
+ I P+ FT S+++ C+ D L + +V + +L+ + K
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCM--HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 239 QIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+++D L E S + DT+ Y ++I + +A ++F +M P T
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+L+ + L + +V + K + ++++ + +++ K G +D+ + S+K
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 355 ----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAI 398
N V + TMI G EA L ++ + L Y T I
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGF 163
Q+ ++V ++ + L+ + K + D ++FR M V D V++T+LI G
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 164 SANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRT 222
+G +A +FK+M+ + P+ T + ++ C K L+ + ++ K +
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK--LEKALEVFDYMQKSEIKL 503
Query: 223 SNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLF 278
++ ++++ ++DD L S K + + YN+MIS +A L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 279 VEMRQKKFSPTDHTLCTILNA 299
+M++ P T T++ A
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRA 584
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 126/269 (46%), Gaps = 21/269 (7%)
Query: 152 DQVSWTSLIAGFSANGQGRDAFLLFKEML-GTHIKPNCFTLTSVISA-CVGQKDALQHCS 209
D V++ +LI GF + + A +FK++ G+ P+ T TS+IS C K ++ S
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK--MREAS 297
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK--------DTIVYNSM 261
+L +++ G +N LVD YA + +L E K D + + S+
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGE----MLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
I Y + +L+ EM + P T ++NA + L++ R++ +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 322 ERNVFVASALVDMYSKGGDIDEARFVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALE 377
F+ + ++D + K G ++EA ++++ K + + +T +I+G+ GR EA+
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 378 LFDRLLTERELTPDHIYFTAILTACNHAG 406
+F +++ +PD I +++L+ AG
Sbjct: 474 IFHKMVA-IGCSPDKITVSSLLSCLLKAG 501
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+ LVD YAK ++ A ++ M D V++TSLI G+ GQ F L++EM
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
+ PN FT + +I+A + L+ L + + F+ ++D + +++
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLK-ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 242 DSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
++ +++ E +K D I + +I + +A+ +F +M SP T+ ++L
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 298 N 298
+
Sbjct: 495 S 495
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 126/269 (46%), Gaps = 21/269 (7%)
Query: 152 DQVSWTSLIAGFSANGQGRDAFLLFKEML-GTHIKPNCFTLTSVISA-CVGQKDALQHCS 209
D V++ +LI GF + + A +FK++ G+ P+ T TS+IS C K ++ S
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK--MREAS 297
Query: 210 TLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK--------DTIVYNSM 261
+L +++ G +N LVD YA + +L E K D + + S+
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGE----MLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGS 321
I Y + +L+ EM + P T ++NA + L++ R++ +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 322 ERNVFVASALVDMYSKGGDIDEARFVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALE 377
F+ + ++D + K G ++EA ++++ K + + +T +I+G+ GR EA+
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 378 LFDRLLTERELTPDHIYFTAILTACNHAG 406
+F +++ +PD I +++L+ AG
Sbjct: 474 IFHKMVA-IGCSPDKITVSSLLSCLLKAG 501
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+ LVD YAK ++ A ++ M D V++TSLI G+ GQ F L++EM
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
+ PN FT + +I+A + L+ L + + F+ ++D + +++
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLK-ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 242 DSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
++ +++ E +K D I + +I + +A+ +F +M SP T+ ++L
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 298 N 298
+
Sbjct: 495 S 495
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 48/304 (15%)
Query: 152 DQVSWTSLIAGFSANGQGRDAFLLFKEM---------------------LGTH------- 183
D S+TSLI+ F+ +G+ R+A +FK+M +GT
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 184 --------IKPNCFTLTSVISACVGQKDAL-QHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
I P+ +T ++I+ C ++ +L Q + + + GF +L+D Y
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCC--KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 235 ANCKQIDDSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
+ +++ +LNE + YNS+ISAY+++ +A++L +M +K P
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
T T+L+ + + + G + N+ +A + MY G E + D+
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 351 TSV----KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
+V + V W T++ + Q+G E +F + + P+ F +++A + G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF-KEMKRAGFVPERETFNTLISAYSRCG 503
Query: 407 FLEK 410
E+
Sbjct: 504 SFEQ 507
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 130/296 (43%), Gaps = 13/296 (4%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P T ++ C + Q+ + +G+ + +AL+D Y K +A KV
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 145 FRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVG 200
M ++ V++ SLI+ ++ +G +A L +M KP+ FT T+++S
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG-FE 395
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS----EKDTI 256
+ ++ ++ + G + + + + Y N + + + + +E + D +
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 257 VYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLV 316
+N++++ + QN + +F EM++ F P T T+++A S S + V+ +
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 317 IKMGSERNVFVASALVDMYSKGGDIDEARFVL----DQTSVKNNVLWTTMIMGYAQ 368
+ G ++ + ++ ++GG +++ VL D N + + +++ YA
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 11/307 (3%)
Query: 52 KTFENDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHA 111
+TF N I+ +S+ S ++A+ + M P S T L++ A+ W ++ A
Sbjct: 490 ETF-NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 112 YLVRSGYEDNLFLSSALVDFYAKCFAI----VDARKVFRAMKVHDQVSWTSLIAGFSANG 167
+ + N +L+ YA I A +V+ + V +L+ S
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD 608
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVI 227
+A F E+ P+ TL S++S G++ + + + ++ +RGF S
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVS-IYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 228 CSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQ 283
SL+ ++ S +L E K D I YN++I AY +N DA ++F EMR
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 284 KKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDE 343
P T T + + ++ + E V +IK G N +++VD Y K DE
Sbjct: 728 SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Query: 344 AR-FVLD 349
A+ FV D
Sbjct: 788 AKLFVED 794
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/425 (18%), Positives = 156/425 (36%), Gaps = 82/425 (19%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I+ ++++ D A++L M KP T LS +A + I +
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKV----HDQVSWTSLIAGFSANGQGRD 171
+G + N+ +A + Y + K+F + V D V+W +L+A F NG +
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISAC------------------VGQKDALQHCSTLHA 213
+FKEM P T ++ISA G L +T+ A
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 214 HVVKRGF----------------RTSNFVICSLVDCYANCKQID---------------- 241
+ + G + + CSL+ YAN K+I
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP 592
Query: 242 -----DSLLLL--------------NETSEK----DTIVYNSMISAYSQNLCSGDALQLF 278
+L+L+ +E E+ D NSM+S Y + A +
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Query: 279 VEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKG 338
M+++ F+P+ T +++ S A + ++ ++ G + ++ + ++ Y +
Sbjct: 653 DYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRN 712
Query: 339 GDIDEARFVLDQTS----VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIY 394
+ +A + + V + + + T I YA EA+ + R + + P+
Sbjct: 713 TRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV-RYMIKHGCRPNQNT 771
Query: 395 FTAIL 399
+ +I+
Sbjct: 772 YNSIV 776
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 144/354 (40%), Gaps = 15/354 (4%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
A+ +L M P + T + + + L+I +V G + + +V
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 131 FYAKCFAIVDARKVFRAMKVHD-----QVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
+ K + DA + M D Q ++ +L+ G G + A + ML
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL 245
P+ +T SVIS + + L ++ R + +L+ Q++++
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLD-QMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 246 LLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
L + K D +NS+I A++LF EMR K P + T ++++
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV----KNNV 357
S L E + + G R+V + L+D + K EA + D+ V +N+V
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ T+I G +S R +A +L D+++ E + PD + ++LT G ++K
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKA 559
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 161/394 (40%), Gaps = 54/394 (13%)
Query: 64 KNASTDRALDLLTGM-NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNL 122
K + AL+ + M N+ P + T ++ KA + ++I +++ GY+ ++
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHD----QVSWTSLIAGFSANGQGRDAFLLFKE 178
+ ++++ K + +A +V M D V++ +LI+ Q +A L +
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 179 MLGTHIKPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANC 237
+ I P+ T S+I C+ + + L + +G F L+D +
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 238 KQIDDSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
++D++L +L + + I YN++I + + + +A ++F EM S T
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
T+++ + + Q+ +I G + + + ++L+ + +GGDI +A ++ Q
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV-QAMT 567
Query: 354 KNN-----VLWTTMIMGYAQSGR----------------------------GL------- 373
N V + T+I G ++GR GL
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 374 EALELFDRLLTERELTPDHIYFTAILTA-CNHAG 406
EA+ LF +L + E PD + + + CN G
Sbjct: 628 EAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGG 661
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 147/351 (41%), Gaps = 55/351 (15%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
AL LL M +L +PS L + L+ + + + +V GY
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR----------- 112
Query: 131 FYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
D +++T+LI G + + +A L M+ +PN T
Sbjct: 113 --------------------PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 152
Query: 191 LTSVISACVGQKD---ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLL 247
V++ + D A + + A ++ N +++D + +DD+L L
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN----TIIDSLCKYRHVDDALNLF 208
Query: 248 NETSEK----DTIVYNSMISAYSQNLCS----GDALQLFVEMRQKKFSPTDHTLCTILNA 299
E K + + Y+S+IS LCS DA QL +M +KK +P T +++A
Sbjct: 209 KEMETKGIRPNVVTYSSLISC----LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR----FVLDQTSVKN 355
+E ++H +IK + ++F ++L++ + +D+A+ F++ + +
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
+ T+I G+ +S R + ELF R ++ R L D + +T ++ H G
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELF-REMSHRGLVGDTVTYTTLIQGLFHDG 374
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 140/348 (40%), Gaps = 15/348 (4%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
K D A +LL M + + T + S K R+ L + + G N+
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 124 LSSALVDFYAKCFAIVDARKVFRAM---KVHDQ-VSWTSLIAGFSANGQGRDAFLLFKEM 179
S+L+ DA ++ M K++ V++ +LI F G+ +A L +M
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 180 LGTHIKPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
+ I P+ FT S+I+ C+ D L + +V + +L+ + K
Sbjct: 282 IKRSIDPDIFTYNSLINGFCM--HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 239 QIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+++D L E S + DT+ Y ++I + +A ++F +M P T
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK 354
+L+ + L + +V + K + ++++ + +++ K G +D+ + S+K
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 355 ----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAI 398
N V + TMI G EA L ++ + L Y T I
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 142/350 (40%), Gaps = 41/350 (11%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
A+ L+ M + +P+ ++ K + L + + + E ++ + + ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 130 DFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
D K + DA +F+ M+ + V+++SLI+ + G+ DA L +M+ I
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 186 PNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLL 245
PN T ++I A V + ++ LH ++KR
Sbjct: 253 PNLVTFNALIDAFVKEGKFVE-AEKLHDDMIKRSI------------------------- 286
Query: 246 LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLAS 305
+ D YNS+I+ + + A Q+F M K P T T++
Sbjct: 287 ------DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 306 LIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT---SVKNNVL-WTT 361
+ +G ++ + G + + L+ GD D A+ V Q V +++ ++
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 362 MIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ G +G+ +ALE+FD + + E+ D +T ++ AG ++ G
Sbjct: 401 LLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 108 QIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGF 163
Q+ ++V +L + L+ + K + D ++FR M V D V++T+LI G
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 164 SANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRT 222
+G +A +FK+M+ + P+ T + ++ C K L+ + ++ K +
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK--LEKALEVFDYMQKSEIKL 428
Query: 223 SNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLF 278
++ ++++ ++DD L S K + + YN+MIS +A L
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 279 VEMRQKKFSPTDHTLCTILNA 299
+M++ P T T++ A
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRA 509
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 136/301 (45%), Gaps = 20/301 (6%)
Query: 121 NLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDAFLLF 176
N+ S +D + K + A K F +MK + V++T LI G+ G A L+
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 177 KEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYAN 236
KEM + N T T++I +K +Q +++ +V+ ++ V +++D +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDG-FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 237 CKQIDDSLL----LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHT 292
D+++ +LN+ D Y +IS N +A ++ +M + P
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 293 LCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA--RFVLDQ 350
T++NA + ++ +I+ G E +V S ++D +K G + EA F +++
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK 400
Query: 351 TSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
N+V++T +I + G +E LF + ++E L PD +T+ + AG ++
Sbjct: 401 A---NDVMYTVLIDALCKEGDFIEVERLFSK-ISEAGLVPDKFMYTSWI-----AGLCKQ 451
Query: 411 G 411
G
Sbjct: 452 G 452
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 153/341 (44%), Gaps = 29/341 (8%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P+ T + + K+ L L+ + R N+ + L+D Y K + A +
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 145 FRAMK----VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVG 200
++ M+ + V++T+LI GF G+ + A ++ M+ ++PN T++I
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 201 QKDALQHCSTLHAHVVKRGFR---TSNFVICSLVDCYANCKQIDDSLLLLNETSEK---- 253
+ D+ + A ++ +G R T+ VI S + K+ + + E EK
Sbjct: 281 RGDS-DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE----IVEDMEKSDLV 335
Query: 254 -DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQV 312
D +++ +M++AY ++ A+ ++ ++ ++ F P L T+++ + + Q+
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG------IAKNGQL 389
Query: 313 HSLVIKMGSER-NVFVASALVDMYSKGGDIDEARFVLDQTS----VKNNVLWTTMIMGYA 367
H ++ E+ N + + L+D K GD E + + S V + ++T+ I G
Sbjct: 390 HEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLC 449
Query: 368 QSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
+ G ++A +L R++ E L D + +T ++ G +
Sbjct: 450 KQGNLVDAFKLKTRMVQE-GLLLDLLAYTTLIYGLASKGLM 489
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 144/322 (44%), Gaps = 28/322 (8%)
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLI 160
L L+ AYLV GY + +++V F K + A + +M D +S+ SLI
Sbjct: 39 LSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI 98
Query: 161 AGFSANGQGRDAFLLFKEMLGTH---IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVK 217
G NG R A L+ + + +H KP+ + S+ + K + ++ V+
Sbjct: 99 DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMK--MLDEVFVYMGVML 156
Query: 218 RGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK------DTIVYNSMISAYSQNLCS 271
+ + + +D + CK + L L + S K + + + +I Y + +
Sbjct: 157 KCCSPNVVTYSTWIDTF--CKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK---A 211
Query: 272 GD---ALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVA 328
GD A+ L+ EMR+ + S T +++ + +++S +++ E N V
Sbjct: 212 GDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVY 271
Query: 329 SALVDMYSKGGDIDEA-RF---VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLT 384
+ ++D + + GD D A +F +L+Q + + +I G +G+ EA E+ + +
Sbjct: 272 TTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED-ME 330
Query: 385 ERELTPDHIYFTAILTACNHAG 406
+ +L PD + FT ++ A +G
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSG 352
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 149/366 (40%), Gaps = 28/366 (7%)
Query: 63 SKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNL 122
++ D LDL M + L ++ C + R L +++ GYE +
Sbjct: 83 ARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDT 142
Query: 123 FLSSALVDFYAKCFAIVDARKVFRAMKVHDQ----------VSWTSLIAGFSANGQGRDA 172
S L++ + +V A+++ D+ ++ +L+ G NG+ DA
Sbjct: 143 VTFSTLIN------GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 173 FLLFKEMLGTHIKPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
LL M+ T +PN T V+ C + AL L + +R + ++
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM--ELLRKMEERKIKLDAVKYSIII 254
Query: 232 DCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
D +D++ L NE K D I+Y ++I + D +L +M ++K +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P +++ L E ++H +I+ G + ++L+D + K +D+A +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 348 LDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
LD K N + +I GY ++ + LELF R ++ R + D + + ++
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF-RKMSLRGVVADTVTYNTLIQGFC 433
Query: 404 HAGFLE 409
G LE
Sbjct: 434 ELGKLE 439
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 134/343 (39%), Gaps = 47/343 (13%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
DR ++ N +T P V+C K+ L +++ + + + S +
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMC-------KSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 129 VDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
+D K ++ +A +F M++ D + +T+LI GF G+ D L ++M+ I
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
P+ +++I C ++ L+ LH +++RG SL+D + Q+D +
Sbjct: 314 TPDVVAFSALID-CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 245 ----LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
L++++ + +N +I+ Y + D L+LF +M + T T++
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWT 360
L L +++ ++ ++ L+D
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLD--------------------------- 465
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
G +G +ALE+F+++ + IY I CN
Sbjct: 466 ----GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 15/237 (6%)
Query: 113 LVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQ 168
+V G N+ + L++ Y K I D ++FR M V D V++ +LI GF G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 169 GRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKD---ALQHCSTLHAHVVKRGFRTSNF 225
A LF+EM+ ++P+ + ++ + AL+ + ++ N
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 226 VICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEM 281
+I + N ++DD+ L K D YN MI + +A LF +M
Sbjct: 498 IIHGM----CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 282 RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKG 338
+ SP T ++ A + ++ + + G + +VDM S G
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 157/360 (43%), Gaps = 17/360 (4%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
K D AL+LL M K + + T + S K R+ + + + + G N+
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 124 LSSALVDFYAKCFAIVDARKVFRAM---KVH-DQVSWTSLIAGFSANGQGRDAFLLFKEM 179
++L++ DA ++ M K++ + V++ +LI F G+ +A L +EM
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 180 LGTHIKPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
+ I P+ T +I+ C+ + L + +V + + +L++ + CK
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNR--LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 239 QIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD-HTL 293
+++D + L E S++ +T+ Y ++I + Q A +F +M + PTD T
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV-PTDIMTY 471
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
+L+ S L + + K E N+F+ + +++ K G + EA + S+
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI 531
Query: 354 KNNVL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAI---LTACNHAGFLE 409
K +V+ + TMI G EA +LF ++ + L Y T I L C+ A E
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 164/386 (42%), Gaps = 49/386 (12%)
Query: 68 TDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSA 127
D A+DL M + PS LS+ AK + L + + + G +L+ S
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 128 LVDFYAK----CFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTH 183
++ + + A+ K+ + D V+ +SL+ G+ + + DA L +M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 184 IKPNCFTLTSVI---------SACVG----------QKDALQHCSTLHAHVVKRG----- 219
KP+ FT T++I S V Q D + + + ++ + KRG
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG-LCKRGDIDLA 242
Query: 220 -----------FRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISA 264
+ + + +++D + ++ ++ L E K + + YNS+I+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 265 YSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERN 324
DA +L M +KK +P T +++A L+E ++H +I+ + +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 325 VFVASALVDMYSKGGDIDEA----RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFD 380
+ L++ + +DEA +F++ + + N + T+I G+ + R + +ELF
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF- 421
Query: 381 RLLTERELTPDHIYFTAILTACNHAG 406
R +++R L + + +T I+ AG
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAG 447
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 24/292 (8%)
Query: 127 ALVDFYAKCFAIVDARKVFRAMKVHD----QVSWTSLIAGFSANGQGRDAFLLFKEMLGT 182
+L+D K + DA KV+ M D + +TSLI F +G+ D ++K+M+
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 183 HIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF----RTSNFVICSLVDC-YANC 237
+ P+ L + + C+ + + + + R F R+ + +I L+ +AN
Sbjct: 512 NCSPDLQLLNTYMD-CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN- 569
Query: 238 KQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTL 293
++ L E+ DT YN +I + + A QL EM+ K F PT T
Sbjct: 570 ----ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 294 CTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSV 353
++++ + + L E + E NV + S+L+D + K G IDEA +L++
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Query: 354 K----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
K N W +++ ++ EAL F + E + TP+ + + ++
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQS-MKELKCTPNQVTYGILING 736
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 147/345 (42%), Gaps = 14/345 (4%)
Query: 73 DLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFY 132
D++ M + +P+ S T + + + + + L + + GYE + L + L+ +
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 133 AKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNC 188
AK + A + MK D V + I F G+ A+ F E+ +KP+
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 189 FTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLN 248
T TS+I + + + L + H+ K + +++ Y + + D++ LL
Sbjct: 274 VTYTSMIGV-LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 249 ETSEKDT----IVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
K + I YN +++ + +AL++F EM+ K +P T +++
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAG 391
Query: 305 SLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK----NNVLWT 360
L ++ + K G NV + +VD K +DEA + ++ K + + +
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
++I G + GR +A ++++++L T +Y + I NH
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 129/319 (40%), Gaps = 28/319 (8%)
Query: 106 GLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIA 161
G +I+ ++ +L L + +D K R +F +K V D S++ LI
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 162 GFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLH------AHV 215
G G + + LF M + C T + + D C ++ +
Sbjct: 561 GLIKAGFANETYELFYSMK----EQGCVLDTRAYNIVI---DGFCKCGKVNKAYQLLEEM 613
Query: 216 VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCS 271
+GF + S++D A ++D++ +L E K + ++Y+S+I + +
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASAL 331
+A + E+ QK +P +T ++L+A + E + ++ N L
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 332 VDMYSKGGDIDEARFVLDQTSVKNN-----VLWTTMIMGYAQSGRGLEALELFDRLLTER 386
++ K ++A FV Q K + +TTMI G A++G EA LFDR
Sbjct: 734 INGLCKVRKFNKA-FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 387 ELTPDHIYFTAILTACNHA 405
+ PD + A++ ++
Sbjct: 793 GV-PDSACYNAMIEGLSNG 810
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 125/305 (40%), Gaps = 41/305 (13%)
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGR 170
R G + N ++ +++ + + +A + F M + D V +T+LI GF G R
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSL 230
A F EM I P+ T T++IS D ++ H
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF--------------- 413
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
CK + E D++ + +I+ Y + DA ++ M Q SP
Sbjct: 414 ------CKGL-----------EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
T T+++ L ++ + K+G + N+F +++V+ K G+I+EA ++ +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 351 TSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
+ V +TT++ Y +SG +A E+ +L + L P + F ++ G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHG 575
Query: 407 FLEKG 411
LE G
Sbjct: 576 MLEDG 580
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 10/268 (3%)
Query: 152 DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTL 211
D +S+++++ G+ G+ + L + M +KPN + S+I + + L
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII-GLLCRICKLAEAEEA 338
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKD----TIVYNSMISAYSQ 267
+ ++++G V +L+D + I + E +D + Y ++IS + Q
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 268 NLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
+A +LF EM K P T ++N + + +VH+ +I+ G NV
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 328 ASALVDMYSKGGDIDEARFVLDQ---TSVKNNVL-WTTMIMGYAQSGRGLEALELFDRLL 383
+ L+D K GD+D A +L + ++ N+ + +++ G +SG EA++L
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE-F 517
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
L D + +T ++ A +G ++K
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+A++ + + +V+A K+F M D V++T LI G+ G +DAF + M+
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
PN T T++I + D L + L + K G + + F S+V+ I+
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 242 DSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+++ L+ E DT+ Y +++ AY ++ A ++ EM K PT T ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALV-----------------DMYSKGGD 340
N L +G ++ + ++ G N ++LV DM S+G
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 341 ID------------------EARFVLDQTSVKNNVL----WTTMIMGYAQSGRGLEALEL 378
D EA F+ + K + ++ +I G+ + + LEA E+
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 379 FDRLLTE 385
FD++ E
Sbjct: 689 FDQMRRE 695
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 125/305 (40%), Gaps = 41/305 (13%)
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGR 170
R G + N ++ +++ + + +A + F M + D V +T+LI GF G R
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSL 230
A F EM I P+ T T++IS D ++ H
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF--------------- 413
Query: 231 VDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
CK + E D++ + +I+ Y + DA ++ M Q SP
Sbjct: 414 ------CKGL-----------EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQ 350
T T+++ L ++ + K+G + N+F +++V+ K G+I+EA ++ +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 351 TSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
+ V +TT++ Y +SG +A E+ +L + L P + F ++ G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHG 575
Query: 407 FLEKG 411
LE G
Sbjct: 576 MLEDG 580
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 10/268 (3%)
Query: 152 DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTL 211
D +S+++++ G+ G+ + L + M +KPN + S+I + + L
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII-GLLCRICKLAEAEEA 338
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKD----TIVYNSMISAYSQ 267
+ ++++G V +L+D + I + E +D + Y ++IS + Q
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 268 NLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
+A +LF EM K P T ++N + + +VH+ +I+ G NV
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 328 ASALVDMYSKGGDIDEARFVLDQ---TSVKNNVL-WTTMIMGYAQSGRGLEALELFDRLL 383
+ L+D K GD+D A +L + ++ N+ + +++ G +SG EA++L
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE-F 517
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
L D + +T ++ A +G ++K
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+A++ + + +V+A K+F M D V++T LI G+ G +DAF + M+
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
PN T T++I + D L + L + K G + + F S+V+ I+
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 242 DSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
+++ L+ E DT+ Y +++ AY ++ A ++ EM K PT T ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALV-----------------DMYSKGGD 340
N L +G ++ + ++ G N ++LV DM S+G
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 341 ID------------------EARFVLDQTSVKNNVL----WTTMIMGYAQSGRGLEALEL 378
D EA F+ + K + ++ +I G+ + + LEA E+
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 379 FDRLLTE 385
FD++ E
Sbjct: 689 FDQMRRE 695
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 157/385 (40%), Gaps = 49/385 (12%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
D A+DL M + PS LS+ AK + L + + + +L+ + L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 129 VDFYAK----CFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
++ + + A+ K+ + D V+ +SL+ G+ + +A L +M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
+PN T ++I A + + + +V RG + F ++V+ ID +L
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALID-RMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 245 LLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK---------------- 284
LL + E D ++Y ++I A DAL LF EM K
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 285 -------------------KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNV 325
K +P T +++A L+E +++ +IK + ++
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 326 FVASALVDMYSKGGDIDEAR----FVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDR 381
F S+L++ + +DEA+ ++ + N V + T+I G+ ++ R E +ELF R
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF-R 419
Query: 382 LLTERELTPDHIYFTAILTACNHAG 406
+++R L + + + ++ AG
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAG 444
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 162/358 (45%), Gaps = 22/358 (6%)
Query: 69 DRALDLLTGMNRLTAK---PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLS 125
++A + + ++R+ A+ P T ++ K + L L + + + E ++ +
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 126 SALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+ ++D + DA +F M + V++ SLI G+ DA L +M+
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 182 THIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
I PN T +++I A V ++ L L+ ++KR F SL++ + ++D
Sbjct: 319 RKINPNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 242 DSL----LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
++ L++++ + + YN++I + + + ++LF EM Q+ T T++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV---LDQTSVK 354
+++ ++ G ++ S L+D K G +++A V L ++ ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 355 NNVL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
++ + MI G ++G+ + +LF L+ + + P+ I +T +++ GF KG
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYTTMIS-----GFCRKG 549
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 162/358 (45%), Gaps = 13/358 (3%)
Query: 63 SKNASTDRALDLLTGMNRLTAKPSKSVLC-TALSSCAKARNWHLGLQIHAYLVRSGYEDN 121
SK + AL LL M + P L C R ++ L+R G+ +
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFAPD 321
Query: 122 LFLSSALVDFYAKCFAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
L++ K + A+ +F + + V + +LI GF +G+ DA + +M+
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT 381
Query: 182 TH-IKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQI 240
++ I P+ T S+I + LH + +G + + + LVD + +I
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH-DMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 241 DDSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTI 296
D++ +LNE S + +T+ +N +ISA+ + +A+++F EM +K P +T ++
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 297 LNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD----QTS 352
++ + + + +I G N + L++ + + G+I EAR +++ Q S
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 353 VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEK 410
+ + + ++I G ++G +A LF+++L + P +I ++ +G +E+
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH-APSNISCNILINGLCRSGMVEE 617
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 136/309 (44%), Gaps = 14/309 (4%)
Query: 105 LGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLI 160
L L++ + G + N++ + LVD + K I +A V M + V + LI
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 161 AGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF 220
+ F + +A +F+EM KP+ +T S+IS + + D ++H L ++ G
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG-LCEVDEIKHALWLLRDMISEGV 525
Query: 221 RTSNFVICSLVDCYANCKQIDDSLLLLNET----SEKDTIVYNSMISAYSQNLCSGDALQ 276
+ +L++ + +I ++ L+NE S D I YNS+I + A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 277 LFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYS 336
LF +M + +P++ + ++N + E + ++ GS ++ ++L++
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 337 KGGDIDEA----RFVLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDH 392
+ G I++ R + + + V + T++ + G +A L D + E P+H
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI-EDGFVPNH 704
Query: 393 IYFTAILTA 401
++ +L +
Sbjct: 705 RTWSILLQS 713
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 149/365 (40%), Gaps = 13/365 (3%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGY 118
I+ + K D A+ L M +P++ + T L K L + + R+G
Sbjct: 240 ISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGC 299
Query: 119 EDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDAFL 174
++ + L+ K + +A ++ M D V +L+ G+ +
Sbjct: 300 SPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTN 359
Query: 175 LFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCY 234
+F EM P + +VI A K + S+ + S F L+D Y
Sbjct: 360 VFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGY 419
Query: 235 ANCKQIDDSLLLLNETSEKD----TIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTD 290
+++ +LLLL E EK Y S+I+A + A +LF E+++ + +
Sbjct: 420 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSS 479
Query: 291 HTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL-- 348
++ L E + + + GS +V+ +AL+ K G I+EA +L
Sbjct: 480 RVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRK 539
Query: 349 -DQTSVKNNVLWTTMIM-GYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
++ + ++ +I+ G+A++G A+E+F+ + + PD + + +L HAG
Sbjct: 540 MEENGCRADINSHNIILNGFARTGVPRRAIEMFE-TIKHSGIKPDGVTYNTLLGCFAHAG 598
Query: 407 FLEKG 411
E+
Sbjct: 599 MFEEA 603
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 138/305 (45%), Gaps = 15/305 (4%)
Query: 117 GYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANG-QGRD 171
GY + ++ SAL+ Y + +A VF +MK + + V++ ++I G + +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
F EM ++P+ T S+++ C + + L + R F +L+
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVC-SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 232 DCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
D Q+D + +L + K + + Y+++I +++ +AL LF EMR +
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
+ T+L+ + + E + + +G +++V +AL+ Y K G DE + V
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 348 LDQTS----VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
+ + N + ++T+I GY++ G EA+E+F R L D + ++A++ A
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF-REFKSAGLRADVVLYSALIDALC 560
Query: 404 HAGFL 408
G +
Sbjct: 561 KNGLV 565
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/424 (17%), Positives = 156/424 (36%), Gaps = 79/424 (18%)
Query: 59 ITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAY------ 112
I+ + ++ + A+ + M +P+ + +C K G++
Sbjct: 275 ISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKG-----GMEFKQVAKFFDE 329
Query: 113 LVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQ 168
+ R+G + + ++L+ ++ AR +F M D S+ +L+ GQ
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 169 GRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVIC 228
AF + +M I PN + ++VI + L + G
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDG-FAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 229 SLVDCYANCKQIDDSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQK 284
+L+ Y + +++L +L E + +KD + YN+++ Y + + ++F EM+++
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 285 KFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA 344
P T T+++ S E ++ G +V + SAL+D K G + A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 345 RFVLDQTSVK----NNVLWTTMIMGYAQSG---------------------------RGL 373
++D+ + + N V + ++I + +S G
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGN 628
Query: 374 EALELFDRLLTER----------------------------ELTPDHIYFTAILTACNHA 405
++LF +L TE E+ P+ + F+AIL AC+
Sbjct: 629 RVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRC 688
Query: 406 GFLE 409
E
Sbjct: 689 NSFE 692
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 106/273 (38%), Gaps = 30/273 (10%)
Query: 58 CITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSG 117
I +K D AL+L M L + T LS K L I + G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 118 YEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDAF 173
+ ++ +AL+ Y K + +KVF MK + + +++++LI G+S G ++A
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 174 LLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
+F+E ++ + +++I A + + +L + K G + S++D
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALC-KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 234 YANCKQIDDS---------------LLLLNETSEKDTIVYNSMISAYSQNLCSGD----- 273
+ +D S L L ET I ++ S N + D
Sbjct: 594 FGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGM 653
Query: 274 -----ALQLFVEMRQKKFSPTDHTLCTILNACS 301
L++F +M Q + P T ILNACS
Sbjct: 654 QELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 145/315 (46%), Gaps = 16/315 (5%)
Query: 109 IHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGF- 163
++ ++R + N+F + +++ K + AR V MKV+ + VS+ +LI G+
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 164 --SANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFR 221
NG+ A + KEM+ + PN T +I + D L + ++ + +
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG-FWKDDNLPGSMKVFKEMLDQDVK 328
Query: 222 TSNFVICSLVDCYANCKQIDDSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQL 277
+ SL++ N +I +++ + ++ + + I YN++I+ + +N +AL +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 278 FVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSK 337
F ++ + PT +++A L + +G + + + G +V + L+ +
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 338 GGDIDEARFVLDQTSVK---NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIY 394
G+I+ A+ + DQ + K + V + ++ GY + G +A L + +++ L P H+
Sbjct: 449 NGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL-KEMSKMGLKPRHLT 507
Query: 395 FTAILTACNHAGFLE 409
+ ++ G L+
Sbjct: 508 YNIVMKGYCKEGNLK 522
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 151/359 (42%), Gaps = 27/359 (7%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
D A+ L M R PS S+ A+ + ++L L L +G N++ + +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 129 VDFYAKC----FAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
++ + +C FA KV + D ++ +LI G G+ +A +L M+
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 185 KPNCFTLTSVISACVGQKD---ALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQID 241
+P+ T S+++ D AL + VK T + +I SL C C ID
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL--CRDGC--ID 245
Query: 242 DSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTIL 297
++ L E K + YNS++ + D L +M ++ P T +L
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 298 NACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNN- 356
+ L E +++ +I G N+ + L+D Y + EA +LD V+N
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM-VRNKC 364
Query: 357 ----VLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLEKG 411
V +T++I GY R + +++F R +++R L + + ++ ++ GF + G
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVF-RNISKRGLVANAVTYSILV-----QGFCQSG 417
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 144/355 (40%), Gaps = 13/355 (3%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N + ++ T ALDLL M K T + S + + + +
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRD 171
G + ++ ++LV K D + + M V + +++ L+ F G+ ++
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
A L+KEM+ I PN T +++ Q + L + + +V+ SL+
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQ-NRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 232 DCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
Y K++DD + + S++ + + Y+ ++ + Q+ A +LF EM
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P T +L+ L + ++ + K + + + + +++ KGG +++A +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 348 ---LDQTSVKNNVL-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAI 398
L VK NV+ +T MI G + G EA L ++ + D Y T I
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 167/390 (42%), Gaps = 31/390 (7%)
Query: 44 FFIKKFSGKTFENDCITKHSKNASTDRALD----LLTGMNRLTAKPSKSVLCTALSSCAK 99
F+ + FSGKT D K S+N ++ LD L M + PS LS+ AK
Sbjct: 35 FWRRAFSGKT-SYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAK 93
Query: 100 ARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAK----CFAIVDARKVFRAMKVHDQVS 155
+ + + + + G N + S L++ + + A+ K+ + + V+
Sbjct: 94 MNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVT 153
Query: 156 WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHV 215
+SL+ G+ + + +A L +M T +PN T ++I A + + + V
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 216 VK---RGFRTSNFVICSLVDCYANCKQIDDSLL--LLNETS----EKDTIVYNSMISAYS 266
K T V+ L CK+ D L LLN+ E ++YN++I
Sbjct: 214 AKGCQPDLVTYGVVVNGL------CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 267 QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVF 326
+ DAL LF EM K P T ++++ + + ++ S +I+ +VF
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 327 VASALVDMYSKGGDIDEARFVLDQTSVKNN-----VLWTTMIMGYAQSGRGLEALELFDR 381
SAL+D + K G + EA + D+ VK + V ++++I G+ R EA ++F+
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE- 385
Query: 382 LLTERELTPDHIYFTAILTACNHAGFLEKG 411
+ + PD + + ++ +E+G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 148/351 (42%), Gaps = 21/351 (5%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
K TD A +LL M + +P + T + K ++ L + + G N+
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 124 LSSALVDFYAKCFAIVDARKVFRAM---KVHDQV-SWTSLIAGFSANGQGRDAFLLFKEM 179
S+L+ DA ++ M K++ V ++++LI F G+ +A L+ EM
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 180 LGTHIKPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
+ I P+ T +S+I+ C+ D L + +V + +L+ + K
Sbjct: 353 VKRSIDPSIVTYSSLINGFCM--HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 239 QIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGD---ALQLFVEMRQKKFSPTDH 291
++++ + + E S++ +T+ YN +I Q +GD A ++F EM P
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ---AGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 292 TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT 351
T T+L+ L + V + + E ++ + +++ K G +++ +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 352 SVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAI 398
S+K + V + TMI G+ + G EA LF + + L Y T I
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 10/264 (3%)
Query: 156 WTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHV 215
+ ++I G DA LFKEM I+PN T +S+IS C+ S L + +
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS-CLCNYGRWSDASRLLSDM 317
Query: 216 VKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDT----IVYNSMISAYSQNLCS 271
++R F +L+D + ++ ++ L +E ++ + Y+S+I+ + +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 272 GDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASAL 331
+A Q+F M K P T T++ + EG +V + + G N + L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 332 VDMYSKGGDIDEARFVLDQT---SVKNNVL-WTTMIMGYAQSGRGLEALELFDRLLTERE 387
+ + GD D A+ + + V N++ + T++ G ++G+ +A+ +F+ L +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE-YLQRSK 496
Query: 388 LTPDHIYFTAILTACNHAGFLEKG 411
+ P + ++ AG +E G
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDG 520
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 152/366 (41%), Gaps = 61/366 (16%)
Query: 99 KARNWHLGLQIHAYLVRSGYE-DNLFLSSALVDFYAKCFAIVDARKVFRAMKVHDQ---- 153
+ R +++ GYE D + ++ L +C +V A+++ D+
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC-------RVSEALELVDRMVEM 187
Query: 154 ------VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACV--GQ---- 201
++ +L+ G NG+ DA +L M+ T +PN T V++ GQ
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 202 ---------------------------KD-ALQHCSTLHAHVVKRGFRTSNFVICSLVDC 233
KD +L + L + +GF+ +L+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 234 YANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPT 289
+ N + DD LL + ++ + + ++ +I ++ + +A QL EM Q+ +P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 290 DHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLD 349
T ++++ L E Q+ L+I G + ++ + L++ Y K ID+ +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 350 QTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHA 405
+ S++ N V + T++ G+ QSG+ A +LF +++ R + PD + + +L
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS-RRVRPDIVSYKILLDGLCDN 486
Query: 406 GFLEKG 411
G LEK
Sbjct: 487 GELEKA 492
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 144/355 (40%), Gaps = 16/355 (4%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
K+ T A++LL M K + K + + + G++ ++
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 124 LSSALVDFYAKCFAIVDARKVFRAM---KVH-DQVSWTSLIAGFSANGQGRDAFLLFKEM 179
+ L+ + D K+ R M K+ + V+++ LI F G+ R+A L KEM
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 180 LGTHIKPNCFTLTSVISA-CVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
+ I PN T S+I C +++ L+ + ++ +G L++ Y
Sbjct: 360 MQRGIAPNTITYNSLIDGFC--KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 239 QIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+IDD L L E S + +T+ YN+++ + Q+ A +LF EM ++ P +
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV---LDQT 351
+L+ L + ++ + K E ++ + ++ +D+A + L
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 352 SVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
VK + +++ L ++ R +TE PD + + ++ A H G
Sbjct: 538 GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA--HLG 590
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 146/347 (42%), Gaps = 17/347 (4%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
AL+L+ M + KP+ L T ++ + + +V +G++ N +++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 131 FYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKP 186
K A ++ R M+ D V ++ +I G +G +AF LF EM K
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 187 NCFTLTSVISA-C-VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
+ T ++I C G+ D + L ++KR + L+D + ++ ++
Sbjct: 297 DIITYNTLIGGFCNAGRWD---DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 245 LLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
LL E ++ +TI YNS+I + + +A+Q+ M K P T ++N
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT---SVKNNV 357
+ +G ++ + G N + LV + + G ++ A+ + + V+ ++
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 358 L-WTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
+ + ++ G +G +ALE+F ++ + IY I CN
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 146 RAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDAL 205
R + D++S S + G A+ DA LF++M+ + P + SA + +
Sbjct: 52 RNLSYRDKLS--SGLVGIKAD----DAVDLFRDMIQSRPLPTVIDFNRLFSA-IAKTKQY 104
Query: 206 QHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETS----EKDTIVYNSM 261
+ L + +G S + + +++C+ C+++ + + + E DT+++N++
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 262 ISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTI-----LNACSSLASLIEGRQVHS-- 314
++ +AL+L M + PT TL T+ LN S A ++ R V +
Sbjct: 165 LNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF 224
Query: 315 -------------------------LVIKMGSERNVFVA----SALVDMYSKGGDIDEAR 345
L+ KM ERN+ + S ++D K G +D A
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 346 FVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
+ ++ +K + + + T+I G+ +GR + +L R + +R+++P+ + F+ ++ +
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL-RDMIKRKISPNVVTFSVLIDS 342
Query: 402 CNHAGFLEKG 411
G L +
Sbjct: 343 FVKEGKLREA 352
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 163/391 (41%), Gaps = 47/391 (12%)
Query: 66 ASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLS 125
S +++ L+ M + P+ T L K + +++ ++ G + ++
Sbjct: 247 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY 306
Query: 126 SALVDFYAKCFAIVDARKVFRAMK---VH-DQVSWTSLIAGFSANGQGRDAFLLFKEMLG 181
+ L+ + I + R M+ +H ++V++ +LI GFS G+ A L EML
Sbjct: 307 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 182 THIKPNCFTLTSVISACVGQ---KDALQHCSTLHAHVVK--------------------- 217
+ PN T ++I + + K+AL+ + A +
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426
Query: 218 -RGF--RTSNFVIC-------SLVDCYANCKQIDDSLLLLNETS----EKDTIVYNSMIS 263
RGF R +C ++D +D++++LLNE S + D + Y+++I+
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Query: 264 AYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSER 323
+ + A ++ + + SP T++ C + L E +++ +I G R
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 324 NVFVASALVDMYSKGGDIDEAR-FVLDQTS---VKNNVLWTTMIMGYAQSGRGLEALELF 379
+ F + LV K G + EA F+ TS + N V + +I GY SG GL+A +F
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 380 DRLLTERELTPDHIYFTAILTACNHAGFLEK 410
D +T+ P + ++L G L +
Sbjct: 607 DE-MTKVGHHPTFFTYGSLLKGLCKGGHLRE 636
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 128/318 (40%), Gaps = 57/318 (17%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
A +++ + R+ P+ + T + +C + ++I+ ++ G+ + F + LV
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 556
Query: 131 FYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKP 186
K + +A + R M + + VS+ LI G+ +G+G AF +F EM P
Sbjct: 557 SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616
Query: 187 NCFTLTSVISA-CVGQ--KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
FT S++ C G ++A + +LHA
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSLHA------------------------------ 646
Query: 244 LLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSL 303
+ DT++YN++++A ++ A+ LF EM Q+ P +T ++++
Sbjct: 647 -----VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR- 700
Query: 304 ASLIEGRQVHSLVIKMGSE------RNVFVASALVDMYSKGGDIDEARFVLDQTS----V 353
+G+ V +++ +E N + + VD K G + +Q
Sbjct: 701 ----KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 756
Query: 354 KNNVLWTTMIMGYAQSGR 371
+ V MI GY++ G+
Sbjct: 757 PDIVTTNAMIDGYSRMGK 774
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 128/308 (41%), Gaps = 17/308 (5%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P+K + + KA W G+ + G+ ++ ++A++D Y++ I +
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 145 FRAMKVHDQ----VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVG 200
M + ++ L+ G+S +FLL++ ++ I P+ T S++ +
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG-IC 840
Query: 201 QKDALQHCSTLHAHVVKRGFRTSNFVICSLVD-CYANCK-----QIDDSLLLLNETSEKD 254
+ + L+ + + RG + L+ C AN + + + L + +KD
Sbjct: 841 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 900
Query: 255 TIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHS 314
T ++M+S ++N ++ + EM ++ SP ++N + + V
Sbjct: 901 TC--DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958
Query: 315 LVIKMGSERNVFVASALVDMYSKGGDIDEA----RFVLDQTSVKNNVLWTTMIMGYAQSG 370
+I SA+V +K G DEA RF+L V +TT++ ++G
Sbjct: 959 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 1018
Query: 371 RGLEALEL 378
+EALEL
Sbjct: 1019 NVIEALEL 1026
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 142/334 (42%), Gaps = 19/334 (5%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
A L M +L +P + ++ + + +V G + ++ + + ++D
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 131 FYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKP 186
K + A +F M+ + D V +TSL+ G +G+ RDA L + M IKP
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 187 NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD--CYANCKQIDDSL 244
+ T ++I A V + L L+ +++ + F SL++ C C +
Sbjct: 246 DVITFNALIDAFVKEGKFLD-AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 245 LLLNETSE--KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
L ET D + Y S+I+ + + DA+++F EM QK + T T++
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQT------SVKNN 356
+ ++V S ++ G N+ + L+ G + +A + + V N
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 357 VLWT--TMIMGYAQSGRGLEALELFDRLLTEREL 388
+ WT ++ G +G+ +AL +F+ + +RE+
Sbjct: 425 I-WTYNVLLHGLCYNGKLEKALMVFED-MRKREM 456
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 156/346 (45%), Gaps = 41/346 (11%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
+ ALDL T M PS L+ AK + + + + + +L G +L+ + L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 129 VDFYAKCFAIVDARKVF-RAMKV---HDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
++ + + A + MK+ D V++TSLI GF + +A + +M+ I
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
KP+ T++I D+L C H N+ + SL D Q++
Sbjct: 174 KPDVVMYTTII-------DSL--CKNGHV----------NYAL-SLFD------QME--- 204
Query: 245 LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLA 304
N D ++Y S+++ + DA L M ++K P T +++A
Sbjct: 205 ---NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 305 SLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEAR--FVLDQTS--VKNNVLWT 360
++ ++++ +I+M N+F ++L++ + G +DEAR F L +T + V +T
Sbjct: 262 KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYT 321
Query: 361 TMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
++I G+ + + +A+++F ++++ LT + I +T ++ G
Sbjct: 322 SLINGFCKCKKVDDAMKIFYE-MSQKGLTGNTITYTTLIQGFGQVG 366
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 10/265 (3%)
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
V++ +LI GF G+ AF LFK M I+P+ +++I + L L +
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF-KAGMLGMGHKLFS 345
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLL----LLNETSEKDTIVYNSMISAYSQNL 269
+ +G + V S +D Y + + + +L + + + Y +I Q+
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
+A ++ ++ ++ P+ T ++++ +L G ++ +IKMG +V +
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 330 ALVDMYSKGGDIDEA-RF---VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTE 385
LVD SK G + A RF +L Q+ N V++ ++I G+ + R EAL++F RL+
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGI 524
Query: 386 RELTPDHIYFTAILTACNHAGFLEK 410
+ PD FT ++ G LE+
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEE 549
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 159/373 (42%), Gaps = 51/373 (13%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK 143
+PS + + K N G ++ +++ GY ++ + LVD +K ++ A +
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 144 VFRAMKVHDQ------VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA 197
++K+ Q V + SLI G+ + +A +F+ M IKP+ T T+V+
Sbjct: 483 F--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 198 CVGQ-------------------KDALQHCSTLHA--------------HVVKRGFRTSN 224
+ + DAL +C+ + A +++R +++
Sbjct: 541 SIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Query: 225 FVICSLV-DCYANCKQIDDSLLLLNE----TSEKDTIVYNSMISAYSQNLCSGDALQLFV 279
+C++V C +I+D+ N E D + YN+MI Y +A ++F
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 280 EMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGG 339
++ F P TL +++ + ++ S++ + GS+ N L+D +SK
Sbjct: 661 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 340 DIDEARFVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYF 395
DI+ + + ++ K + V ++ +I G + GR EA +F + + + +L PD + +
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAY 779
Query: 396 TAILTACNHAGFL 408
++ G L
Sbjct: 780 AILIRGYCKVGRL 792
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 136/320 (42%), Gaps = 16/320 (5%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P+ CT ++ K + + + G E +L S L+D Y K + K+
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 145 F-----RAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACV 199
F + +K+ D V ++S I + +G A +++K ML I PN T T +I +
Sbjct: 344 FSQALHKGVKL-DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG-L 401
Query: 200 GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSE----KDT 255
Q + ++ ++KRG S SL+D + C + L + + D
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 256 IVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSL 315
++Y ++ S+ A++ V+M + ++++ L E +V L
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 316 VIKMGSERNVFVASALVDMYSKGGDIDEARFV---LDQTSVKNNVL-WTTMIMGYAQSGR 371
+ G + +V + ++ + G ++EA F+ + + ++ + L + T+I + + +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 372 GLEALELFDRLLTERELTPD 391
L+LFD L+ +++ D
Sbjct: 582 PTIGLQLFD-LMQRNKISAD 600
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 211 LHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL----LLLNETSEKDTIVYNSMISAYS 266
H V++RGFR V C+ V + QI+ + L+L+ + + + ++I+ +
Sbjct: 239 FHRLVMERGFRVG-IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 267 QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVF 326
+ A LF M Q+ P T+++ L G ++ S + G + +V
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 327 VASALVDMYSKGGDIDEARFV----LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
V S+ +D+Y K GD+ A V L Q N V +T +I G Q GR EA ++ ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 383 LTERELTPDHIYFTAILTACNHAGFLEKG 411
L +R + P + +++++ G L G
Sbjct: 418 L-KRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
+ AL L M ++ +P CT + + K +GLQ+ + R+ ++ + + +
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 129 VDFYAKCFAIVDARKVFRAM---KVH-DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHI 184
+ KC I DA K F + K+ D V++ ++I G+ + + +A +F+ + T
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 185 KPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL 244
PN TLT +I D + + + + ++G + + L+D ++ I+ S
Sbjct: 668 GPNTVTLTILIHVLCKNND-MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 245 LLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNAC 300
L E EK + Y+ +I + +A +F + K P ++
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 301 SSLASLIEGRQVHSLVIKMGSERNVFVASAL 331
+ L+E ++ +++ G + + + AL
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 148/325 (45%), Gaps = 61/325 (18%)
Query: 103 WHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVHD----QVSWTS 158
W ++I + +G+ N+++ + L++ + K I DA+KVF + VS+ +
Sbjct: 225 WGFYMEI----LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNT 280
Query: 159 LIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKR 218
LI G+ G + F L +M + +P+ FT +++I+A + +++ + L + KR
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA-LCKENKMDGAHGLFDEMCKR 339
Query: 219 GFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK--------DTIVYNSMISAYSQNLC 270
G ++ + +L+ ++ +ID L+ E+ +K D ++YN++++ + +N
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEID----LMKESYQKMLSKGLQPDIVLYNTLVNGFCKN-- 393
Query: 271 SGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASA 330
GD L+ R + +I+ G + +
Sbjct: 394 -GD--------------------------------LVAARNIVDGMIRRGLRPDKITYTT 420
Query: 331 LVDMYSKGGDID---EARFVLDQTSVK-NNVLWTTMIMGYAQSGRGLEALELFDRLLTER 386
L+D + +GGD++ E R +DQ ++ + V ++ ++ G + GR ++A E R +
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA-ERALREMLRA 479
Query: 387 ELTPDHIYFTAILTACNHAGFLEKG 411
+ PD + +T ++ A G + G
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTG 504
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 157/359 (43%), Gaps = 16/359 (4%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKS-VLCTALSSCAKARNWHLGLQIHAYLV 114
ND I +K+ +AL LL GM + T +K+ L + +S+ A + + L
Sbjct: 273 NDIIMGFAKSGDPSKALQLL-GMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELR 331
Query: 115 RSGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGR 170
+SG + +AL+ Y K + DA + M+ D+ +++ LI + G+
Sbjct: 332 QSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWE 391
Query: 171 DAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSL 230
A ++ KEM ++PN F + ++ A + Q + + G + +
Sbjct: 392 SARIVLKEMEAGDVQPNSFVFSRLL-AGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 231 VDCYANCKQIDDSLL----LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKF 286
+D + +D ++ +L+E E D + +N++I + ++ A ++F M ++
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 287 SPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARF 346
P T ++N+ + +++ + G NV + LVD+Y K G ++A
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 347 VLDQTSV----KNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
L++ ++ ++ +I YAQ G +A+ F R++T L P + +++ A
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF-RVMTSDGLKPSLLALNSLINA 628
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 149/355 (41%), Gaps = 22/355 (6%)
Query: 56 NDCITKHSKNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVR 115
N I ++ + D A LL+ MN P + + + S K++ + L +
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMK----VHDQVSWTSLIAGFSANGQGRD 171
G N+ + +AL+D Y K + +A + M + + +++ +LI G A+G+ ++
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
A LL ++M+ ++P T T +I + D H + ++ G + + +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD-FDHAYSRFQQMLSSGTKPDAHTYTTFI 644
Query: 232 DCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
Y ++ D+ ++ + E D Y+S+I Y + A + MR
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P+ HT +++ L + G+Q GSE + A+ +M ++ +
Sbjct: 705 PSQHTFLSLI---KHLLEMKYGKQ-------KGSEPEL---CAMSNMMEFDTVVELLEKM 751
Query: 348 LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTAC 402
++ + N + +I+G + G A ++FD + ++P + F A+L+ C
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 128/286 (44%), Gaps = 17/286 (5%)
Query: 136 FAIVDARKVFRAMKVHDQV-----SWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
F +VD K + D+V ++ ++ G+ G +A +++ + P+ FT
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNET 250
TS+I +KD L + + +G R + L+ ++ID+++ L +
Sbjct: 256 YTSLIMGYCQRKD-LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 251 SEKDTIVYNSMISAYSQNLCSGD----ALQLFVEMRQKKFSPTDHTLCTILNACSSLASL 306
+ + + ++LC + AL L EM + P HT ++++ S
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 307 IEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK----NNVLWTTM 362
+ R++ +++ G NV +AL++ Y K G I++A V++ + N + +
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 363 IMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA-CNHAGF 407
I GY +S +A+ + +++L ER++ PD + + +++ C F
Sbjct: 435 IKGYCKSNVH-KAMGVLNKML-ERKVLPDVVTYNSLIDGQCRSGNF 478
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 148/351 (42%), Gaps = 19/351 (5%)
Query: 70 RALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALV 129
AL+L+ M KP+ + S + ++ ++ G N+ +AL+
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 130 DFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIK 185
+ Y K I DA V M+ + ++ LI G+ + + A + +ML +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVL 459
Query: 186 PNCFTLTSVISA-C-VGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDS 243
P+ T S+I C G D+ +L + RG + S++D K+++++
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSL---MNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 244 LLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNA 299
L + +K + ++Y ++I Y + +A + +M K P T +++
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 300 CSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEA--RF--VLDQTSVKN 355
+ L E + ++K+G + V + L+ K GD D A RF +L + +
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 356 NVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
+TT I Y + GR L+A ++ + + E ++PD +++++ G
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAK-MRENGVSPDLFTYSSLIKGYGDLG 686
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 122/332 (36%), Gaps = 78/332 (23%)
Query: 155 SWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAH 214
++T LI + + +A L KEM T IKPN T T +I + Q + L
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC-KFEKARELLGQ 383
Query: 215 VVKRGFRTSNFVICSLVDCYANCKQIDDS------------------------------- 243
++++G + +L++ Y I+D+
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 244 ---LLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTI 296
+ +LN+ E+ D + YNS+I ++ A +L M + P T ++
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 297 LNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKN- 355
+++ + E + + + G NV + +AL+D Y K G +DEA +L++ KN
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 356 ---NVLWTTMIMGYAQSGR--------------GLEALELFDRLLTERELT--------- 389
++ + +I G G+ GL+ D +L R L
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 390 -----------PD-HIYFTAILTACNHAGFLE 409
PD H Y T I T C L+
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 258 YNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVI 317
YN+++++ ++ + Q+++EM + K P +T ++N L ++ E Q S ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 318 KMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK----NNVLWTTMIMGYAQSGRGL 373
+ G + + F ++L+ Y + D+D A V ++ +K N V +T +I G + R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 374 EALELFDRLLTERELTPDHIYFTAILTAC 402
EA++LF ++ + Y I + C
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 153/344 (44%), Gaps = 19/344 (5%)
Query: 71 ALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVD 130
AL ++ M + +P + + ++ + + + + + G+ ++ + + ++D
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 131 FYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKP 186
K + DA ++F M+ D V++ SL+AG +G+ DA L ++M+ I P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 187 NCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLL 246
N T T+VI V ++ L+ + +R F SL++ ++D++ +
Sbjct: 243 NVITFTAVIDVFV-KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 247 LNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSS 302
L+ K D + YN++I+ + ++ + +LF EM Q+ T TI+
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 303 LASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNV----- 357
+++ S +M S N+ S L+ +++A VL + K+ +
Sbjct: 362 AGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKA-LVLFENMQKSEIELDIT 417
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTA 401
+ +I G + G +A +LF R L+ + L PD + +T +++
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLF-RSLSCKGLKPDVVSYTTMISG 460
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 139/303 (45%), Gaps = 14/303 (4%)
Query: 116 SGYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRD 171
SG +++ + ++ Y K A +F+ MK D+ ++ SL + +
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 172 AFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLV 231
A + EML + KP C T ++I++ V + L L+ + K G + + V SL+
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYV-RLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Query: 232 DCYANCKQIDDSL----LLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFS 287
+ +A +++++ ++ + + IV S+I AYS+ C +A +++ +M+ +
Sbjct: 628 NGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGG 687
Query: 288 PTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV 347
P ++L+ C+ L + E + + + + G+ +V + ++ +Y G +DEA V
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEV 746
Query: 348 LDQTS----VKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
++ + + + ++ YA G+ E ELF +L ER+L D F + T
Sbjct: 747 AEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLK 806
Query: 404 HAG 406
G
Sbjct: 807 KGG 809
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 102/254 (40%), Gaps = 41/254 (16%)
Query: 106 GLQIHAYLVRSGYEDNLFLSS----ALVDFYAKCFAIVDARKVF---RAM--KVHDQVSW 156
GL + A + ++ + LSS A++D YA+ V+A VF R M + +D + +
Sbjct: 459 GLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEY 518
Query: 157 TSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVV 216
+I + A LFK M P+ T S+ G D + + A ++
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGV-DLVDEAQRILAEML 577
Query: 217 KRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQ 276
G C CK Y +MI++Y + DA+
Sbjct: 578 DSG-------------CKPGCK------------------TYAAMIASYVRLGLLSDAVD 606
Query: 277 LFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYS 336
L+ M + P + +++N + + E Q ++ + G + N V ++L+ YS
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 337 KGGDIDEARFVLDQ 350
K G ++EAR V D+
Sbjct: 667 KVGCLEEARRVYDK 680
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 19/285 (6%)
Query: 113 LVRSGYEDNLFLSSALVDFYAKCFAIVDARK-----VFRAMKVHDQVSWTSLIAGFSANG 167
+V G E + + + L+ Y K + A + VF V DQ ++ SLI G G
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF-VPDQFTYRSLIDGLCHEG 370
Query: 168 QGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGF----RTS 223
+ A LF E LG IKPN ++I Q L+ + L + ++G +T
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE-AAQLANEMSEKGLIPEVQTF 429
Query: 224 NFVICSLVDCYANCKQIDDSLL--LLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEM 281
N ++ L C C D L+ ++++ D +N +I YS L +AL++ M
Sbjct: 430 NILVNGL--CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 282 RQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDI 341
P +T ++LN + + + + +++ G N+F + L++ + +
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 342 DEARFVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRL 382
DEA +L++ K + V + T+I G+ ++G A LF ++
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 47/328 (14%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P+ V T + KAR + ++V+ G + NL++ + L+ + K +++A +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 145 FRAMKV----HDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVG 200
M+ D ++T LI G Q +A LF++M I P+ T S+I
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 201 Q---KDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK---- 253
+ + AL CS + A G + +L+D Y N + I ++ L E + K
Sbjct: 422 EYNMEQALDLCSEMTA----SGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 254 DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVH 313
D + Y ++I A+ + +AL+L+ +M + P DHT AC EGR
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF-----ACLVDGFWKEGR--- 529
Query: 314 SLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRGL 373
S +D Y + Q S N+V +T +I G Q+G L
Sbjct: 530 --------------LSVAIDFYQENN---------QQRSCWNHVGFTCLIEGLCQNGYIL 566
Query: 374 EALELFDRLLTERELTPDHIYFTAILTA 401
A F + + +TPD + ++L
Sbjct: 567 RASRFFSDMRS-CGITPDICSYVSMLKG 593
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 137/307 (44%), Gaps = 19/307 (6%)
Query: 117 GYEDNLFLSSALVDFYAKCFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDA 172
G + N+++ + + + + +A K+F MK H + +++++I G+ G R A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 173 FLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVD 232
+ L+KE+L + PN +++ ++ L +L H+VK G + +V L+
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARE-LVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 233 CYANCKQIDDSLLLLNETS----EKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSP 288
+ + +++ LL+E D Y +I+ +A +LF +M+ ++ P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 289 TDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL 348
+ T ++++ ++ + + S + G E N+ S L+D Y DI A +
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 349 DQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNH 404
+ ++K + V +T +I + + EAL L+ +L DH + AC
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF------ACLV 521
Query: 405 AGFLEKG 411
GF ++G
Sbjct: 522 DGFWKEG 528
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 140/328 (42%), Gaps = 25/328 (7%)
Query: 99 KARNWHLGLQIHAYLVRSGYEDNLFLSSALVD------FYAKCFAIVDARKVFRAMKVHD 152
+ R L +++ GYE N S L++ ++ +VD R V K D
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD-RMVEMGHK-PD 192
Query: 153 QVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA-CVGQKDALQHCSTL 211
++ +L+ G +G+ +A LL +M+ +PN T V++ C + AL L
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM--EL 250
Query: 212 HAHVVKRGFRTSNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQ 267
+ +R + ++D +D++ L NE K + I YN +I +
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 268 NLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFV 327
D +L +M ++K +P T ++++ L E ++H +I G +
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 328 ASALVDMYSKGGDIDEARFVLDQTSVK----NNVLWTTMIMGYAQSGRGLEALELFDRLL 383
++L+D + K +D+A ++D K N + +I GY ++ R + LELF R +
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF-RKM 429
Query: 384 TERELTPDHIYFTAILTACNHAGFLEKG 411
+ R + D + + ++ GF E G
Sbjct: 430 SLRGVVADTVTYNTLI-----QGFCELG 452
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 147/359 (40%), Gaps = 24/359 (6%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
K+ T A++LL M K + K + + + G N+
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 124 LSSALVDFYAKCFAIVDARKVFRAM---KVH-DQVSWTSLIAGFSANGQGRDAFLLFKEM 179
+ L+ + D K+ R M K++ + V+++ LI F G+ R+A L KEM
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 180 LGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRG----FRTSNFVICSLVDCYA 235
+ I P+ T TS+I +++ L + + +V +G RT N L++ Y
Sbjct: 360 IHRGIAPDTITYTSLIDG-FCKENHLDKANQMVDLMVSKGCDPNIRTFNI----LINGYC 414
Query: 236 NCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDH 291
+IDD L L + S + DT+ YN++I + + A +LF EM +K P
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 292 TLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFV---L 348
T +L+ + ++ + K E ++ + + ++ +D+A + L
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 349 DQTSVKNNV-LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAG 406
VK V + MI G + G EA EL R + E PD + ++ A H G
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEA-ELLFRKMEEDGHAPDGWTYNILIRA--HLG 590
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 133/337 (39%), Gaps = 55/337 (16%)
Query: 79 NRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLS----SALVDFYAK 134
N +T P +V+C K+ L ++ L+R E N+ L S ++D K
Sbjct: 227 NAVTYGPVLNVMC-------KSGQTALAME----LLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 135 CFAIVDARKVFRAMKVH----DQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFT 190
++ +A +F M++ + +++ LI GF G+ D L ++M+ I PN T
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 191 LTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL----LL 246
+ +I + V ++ L+ LH ++ RG SL+D + +D + L+
Sbjct: 336 FSVLIDSFV-KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 247 LNETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASL 306
+++ + + +N +I+ Y + D L+LF +M + T T++ L L
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 307 IEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVKNNVLWTTMIMGY 366
+++ ++ N+ L+D G
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLD-------------------------------GL 483
Query: 367 AQSGRGLEALELFDRLLTERELTPDHIYFTAILTACN 403
+G +ALE+F+++ + IY I CN
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 153/344 (44%), Gaps = 22/344 (6%)
Query: 84 KPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARK 143
+PS + + K N G ++ +++ GY ++ + LVD +K ++ A +
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 144 VFRAMKVHDQ------VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA 197
++K+ Q V + SLI G+ + +A +F+ M IKP+ T T+V+
Sbjct: 483 F--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 198 CVGQKDALQHCSTLHA----HVVKRGFRTSNFVICSLV-DCYANCKQIDDSLLLLNE--- 249
+ + +H +++R +++ +C++V C +I+D+ N
Sbjct: 541 SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 600
Query: 250 -TSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIE 308
E D + YN+MI Y +A ++F ++ F P TL +++ +
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 660
Query: 309 GRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK----NNVLWTTMIM 364
++ S++ + GS+ N L+D +SK DI+ + + ++ K + V ++ +I
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 365 GYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFL 408
G + GR EA +F + + + +L PD + + ++ G L
Sbjct: 721 GLCKRGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRL 763
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 10/254 (3%)
Query: 154 VSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHA 213
V++ +LI GF G+ AF LFK M I+P+ +++I + L L +
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF-KAGMLGMGHKLFS 345
Query: 214 HVVKRGFRTSNFVICSLVDCYANCKQIDDSLL----LLNETSEKDTIVYNSMISAYSQNL 269
+ +G + V S +D Y + + + +L + + + Y +I Q+
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 270 CSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVFVAS 329
+A ++ ++ ++ P+ T ++++ +L G ++ +IKMG +V +
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 330 ALVDMYSKGGDIDEA-RF---VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTE 385
LVD SK G + A RF +L Q+ N V++ ++I G+ + R EAL++F RL+
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGI 524
Query: 386 RELTPDHIYFTAIL 399
+ PD FT ++
Sbjct: 525 YGIKPDVATFTTVM 538
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 211 LHAHVVKRGFRTSNFVICSLVDCYANCKQIDDSL----LLLNETSEKDTIVYNSMISAYS 266
H V++RGFR V C+ V + QI+ + L+L+ + + + ++I+ +
Sbjct: 239 FHRLVMERGFRVG-IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 267 QNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSERNVF 326
+ A LF M Q+ P T+++ L G ++ S + G + +V
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 327 VASALVDMYSKGGDIDEARFV----LDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRL 382
V S+ +D+Y K GD+ A V L Q N V +T +I G Q GR EA ++ ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 383 LTERELTPDHIYFTAILTACNHAGFLEKG 411
L +R + P + +++++ G L G
Sbjct: 418 L-KRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 145/370 (39%), Gaps = 59/370 (15%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P+ CT ++ K + + + G E +L S L+D Y K + K+
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 145 F-----RAMKVHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISACV 199
F + +K+ D V ++S I + +G A +++K ML I PN T T +I +
Sbjct: 344 FSQALHKGVKL-DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG-L 401
Query: 200 GQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCKQIDD----------------- 242
Q + ++ ++KRG S SL+D + C +
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 243 ----------------------SLLLLNETSEKDTIVYNSMISAYSQNLCSGDALQLFVE 280
S+ +L ++ + +V+NS+I + + +AL++F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 281 MRQKKFSPTDHTLCTILNA-------CSSLASLIEGRQVHSLVIKMGSERNVFVASALVD 333
M P T T++ C + I G Q+ L+ + ++ V + ++
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI-GLQLFDLMQRNKISADIAVCNVVIH 580
Query: 334 MYSKGGDIDEA-RF---VLDQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELT 389
+ K I++A +F +++ + V + TMI GY R EA +F+ LL
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE-LLKVTPFG 639
Query: 390 PDHIYFTAIL 399
P+ + T ++
Sbjct: 640 PNTVTLTILI 649
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 150/352 (42%), Gaps = 28/352 (7%)
Query: 85 PSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSALVDFYAKCFAIVDARKV 144
P S L+ A L + + R G +++ + +VD + K I ARK
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 145 FRAMK----VHDQVSWTSLIAGFSANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISA-C- 198
F M+ + V++T+LI + + A LF+ ML PN T +++I C
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 199 VGQKDAL-----QHCSTLHAHVVKRGF--------RTSNFVICSLVDCYANCKQIDDSLL 245
GQ + + C + V F R + +L+D + +++++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 246 LLN----ETSEKDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLCTILNACS 301
LL+ E E + IVY+++I + +A ++ EM + F T +T ++++
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 302 SLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVLDQTSVK----NNV 357
+ +V S +++ NV + + ++D K G DEA ++ K N V
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 358 LWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIYFTAILTACNHAGFLE 409
+T MI G+ G+ LEL +R + + + P+++ + ++ C G L+
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLER-MGSKGVAPNYVTYRVLIDHCCKNGALD 831
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 138/353 (39%), Gaps = 43/353 (12%)
Query: 64 KNASTDRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLF 123
K ++A M + P+ + + KA+ ++ ++ G N+
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 124 LSSALVDFYAKCFAIVDARKVFRAM-------------KVHDQ-------VSWTSLIAGF 163
SAL+D + K + A ++F M K +D V++ +L+ GF
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 164 SANGQGRDAFLLFKEMLGTHIKPNCFTLTSVISAC--VGQKDALQHCSTLHAHVVKRGFR 221
+ + +A L M +PN ++I VG+ D Q T + + GF
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT---EMSEHGFP 706
Query: 222 TSNFVICSLVDCYANCKQIDDSLLLLNETSEK----DTIVYNSMISAYSQNLCSGDALQL 277
+ + SL+D Y K+ D + +L++ E + ++Y MI + + +A +L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 278 FVEMRQKKFSPTDHTLCTILNACSSLASLIEGRQVHSLVIKMGSE---RNVFVASALVDM 334
M +K P T +++ + + L+ +MGS+ N L+D
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKI---ETCLELLERMGSKGVAPNYVTYRVLIDH 823
Query: 335 YSKGGDIDEARFVLDQTSVKNNVLWTTMIMGYAQSGRG-----LEALELFDRL 382
K G +D A +L++ + W T GY + G +E+L L D +
Sbjct: 824 CCKNGALDVAHNLLEEMKQTH---WPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/377 (17%), Positives = 143/377 (37%), Gaps = 36/377 (9%)
Query: 69 DRALDLLTGMNRLTAKPSKSVLCTALSSCAKARNWHLGLQIHAYLVRSGYEDNLFLSSAL 128
+ A+D L M + P+ T L C + ++ ++ G + + ++L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 129 VDFYAKC----FAIVDARKVFRAMKVHDQVSWTSLIAGFSANGQGRDAFLL------FKE 178
V Y +A +K+ + + V + LI + + LL + E
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 179 MLGTHIKPNCFTLTSVISACVGQKDALQHCSTLHAHVVKRGFRTSNFVICSLVDCYANCK 238
ML + N ++S + C+ + ++ ++ +GF +++ N
Sbjct: 439 MLAAGVVLNKINVSS-FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 239 QIDDSLLLLNETSE----KDTIVYNSMISAYSQNLCSGDALQLFVEMRQKKFSPTDHTLC 294
+++ + LL E D Y M+ ++ + A + F EMR+ +P T
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 295 TILNACSSLASLIEGRQVHSLVIKMGSERNVFVASALVDMYSKGGDIDEARFVL------ 348
+++A + ++ ++ G N+ SAL+D + K G +++A +
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 349 --------------DQTSVKNNVLWTTMIMGYAQSGRGLEALELFDRLLTERELTPDHIY 394
D + N V + ++ G+ +S R EA +L D + E P+ I
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG-CEPNQIV 676
Query: 395 FTAILTACNHAGFLEKG 411
+ A++ G L++
Sbjct: 677 YDALIDGLCKVGKLDEA 693