Miyakogusa Predicted Gene
- Lj2g3v1509500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1509500.1 tr|G7KCC8|G7KCC8_MEDTR Lysine-specific
demethylase 5B OS=Medicago truncatula GN=MTR_5g029370 PE=4
SV,77.15,0,Clavaminate synthase-like,NULL; Small domain found in the
jumonji family of,Transcription factor jum,CUFF.37301.1
(843 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46910.1 | Symbols: | Transcription factor jumonji (jmj) fam... 859 0.0
AT3G48430.1 | Symbols: REF6 | relative of early flowering 6 | ch... 245 8e-65
AT2G34880.1 | Symbols: MEE27, PKDM7C | Transcription factor jumo... 236 5e-62
AT4G20400.1 | Symbols: JMJ14, PKDM7B | JUMONJI 14 | chr4:1100900... 233 5e-61
AT1G30810.2 | Symbols: | Transcription factor jumonji (jmj) fam... 231 2e-60
AT1G30810.1 | Symbols: | Transcription factor jumonji (jmj) fam... 231 2e-60
AT1G08620.2 | Symbols: PKDM7D | Transcription factor jumonji (jm... 224 3e-58
AT1G08620.1 | Symbols: PKDM7D | Transcription factor jumonji (jm... 224 3e-58
AT4G20400.2 | Symbols: JMJ14, PKDM7B | JUMONJI 14 | chr4:1100975... 222 1e-57
AT5G04240.1 | Symbols: ELF6 | Zinc finger (C2H2 type) family pro... 217 2e-56
AT1G63490.1 | Symbols: | transcription factor jumonji (jmjC) do... 194 2e-49
AT2G38950.1 | Symbols: | Transcription factor jumonji (jmj) fam... 158 1e-38
>AT5G46910.1 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr5:19046888-19050880 FORWARD LENGTH=787
Length = 787
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/764 (58%), Positives = 533/764 (69%), Gaps = 67/764 (8%)
Query: 1 MVERRSSLSKEARNGLEFLKRKRLQNA-----------NMMNRSGGDALR-SSGSCGMGL 48
M ERR LSKEA++GLEFLKRK+LQ + M RSGGDALR +S SCGM L
Sbjct: 1 MAERRICLSKEAKDGLEFLKRKKLQKMRSDSVNETVGFSTMARSGGDALRPTSASCGMRL 60
Query: 49 Q-GSADAFSK-------------RKVDKFDTSNLEWTDKIMECPVYSPTKEEFQDPLIYL 94
+ S+D SK KV+K +T +L+WT+++ ECPVY PTKEEF+DPL YL
Sbjct: 61 RVTSSDTVSKVHGASTVRGGLMKEKVEKLETDDLKWTERLPECPVYRPTKEEFEDPLTYL 120
Query: 95 QKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTEDKVKFFM 154
QKI PEASKYGICKIVSPL+A+VPAG VLMKEK+ FKFTTRVQPLRLAEWD++DKV FFM
Sbjct: 121 QKIFPEASKYGICKIVSPLTATVPAGAVLMKEKSNFKFTTRVQPLRLAEWDSDDKVTFFM 180
Query: 155 SGRNYTLRDFEKIANKIFARRYCSAGGLPPTYLEKEFWHEIGCGKMETVEYACDVDGSAF 214
SGR YT RD+EK+ANK+FARRYCS G LP ++LEKEFW EI CGK ETVEYACDVDGSAF
Sbjct: 181 SGRTYTFRDYEKMANKVFARRYCSGGSLPDSFLEKEFWKEIACGKTETVEYACDVDGSAF 240
Query: 215 SSSPTDPLGNSKWNLKKLSRLPKSILRFLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLY 274
SS+P DPLG+SKWNL K+SRLPKS LR LETSIPGVTEPMLYIGMLFSMFAWHVEDHYLY
Sbjct: 241 SSAPGDPLGSSKWNLNKVSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLY 300
Query: 275 SINYQHCGASKTWYGIPGQEALEFERVVREHVYTTDILSSDGEDGAFDVLLGKTTLFPPN 334
SINYQHCGASKTWYGIPG AL+FE+VV+E VY DILS++GEDGAFDVLLGKTT+FPP
Sbjct: 301 SINYQHCGASKTWYGIPGSAALKFEKVVKECVYNDDILSTNGEDGAFDVLLGKTTIFPPK 360
Query: 335 ILLEHGVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGATASRRYA 394
LL+H VPVYKAVQKPGEF++TFPRAYHAGFSHGFNCGEAVNFA+GDWFP GA AS RYA
Sbjct: 361 TLLDHNVPVYKAVQKPGEFVVTFPRAYHAGFSHGFNCGEAVNFAMGDWFPFGAIASCRYA 420
Query: 395 FLNRVPLLPHEELLCKEAMRLCKCLELEDPDFPSLDLISHNSTKISFVNLMRFQHCARWF 454
LNRVPLLPHEEL+CKEAM L + E+ D +L S K +FV+L+RF H ARW
Sbjct: 421 HLNRVPLLPHEELICKEAMLLNSSSKSENLDLTPTELSGQRSIKTAFVHLIRFLHLARWS 480
Query: 455 LMKSRVRINLSLHSHGTILCSLCKRDCYIAYVDCNCHEHPVCVRHDVESLAFKCGSKHTL 514
LMKS + L +++GTI+CSLCKRDCY+A+++C C+ HPVC+RHDV+ L CG+ HTL
Sbjct: 481 LMKSGLCTGLVSNTYGTIVCSLCKRDCYLAFINCECYSHPVCLRHDVKKLDLPCGTTHTL 540
Query: 515 RLREDIVNMEDAAKKFEQEDGVLEELSKQTETDQNMYSYPLSDLFQRAEANGYVPYCELK 574
LR++I +ME AA KFE+EDGV S TD+++Y YP S A+ +GY PY +
Sbjct: 541 YLRDNIEDMEAAAMKFEKEDGV----SDLITTDEDLYKYPSSITLPAAKEDGYTPYSTIY 596
Query: 575 LDSDFECYTTPEQSNNQECATQSVFRHSSENYKEVSDVSFSSAAXXXXXXXXXXXXXXAP 634
F+ YT E +++ + + + N +S V+
Sbjct: 597 ----FDFYTEVEMTSHDQLQSGNPVMSYEANASCISSVA-----------DDYECSDYVN 641
Query: 635 RNAEGHSNLNLGTIDFQDLGERISNSACESSLSPALYHESSAKPQGGLQRYDTKPIVDNE 694
R A N + L E + AC SS + D + + D E
Sbjct: 642 RRA------NCSSSSDSKLSEEV---ACSSSKKTRFFPVVQ----------DEQLVADQE 682
Query: 695 SDDSDSGMFRVKRPSALKAERRNVNKVLSSKNSE-QQGLNRLKK 737
SD SDS FRVKR S+LK E R V VL ++ S+ Q L RLKK
Sbjct: 683 SDGSDSECFRVKRRSSLKFENRTV--VLDTRESDHHQELKRLKK 724
>AT3G48430.1 | Symbols: REF6 | relative of early flowering 6 |
chr3:17935609-17940456 FORWARD LENGTH=1360
Length = 1360
Score = 245 bits (626), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 196/377 (51%), Gaps = 44/377 (11%)
Query: 70 WTDKIMECPVYSPTKEEFQDPLIYLQKIAPEASKYGICKI------------VSPLSASV 117
W + P + PT EFQDP+ Y+ KI EAS+YGICKI +S L+ S+
Sbjct: 13 WLKSLPVAPEFRPTLAEFQDPIAYILKIEEEASRYGICKILPPLPPPSKKTSISNLNRSL 72
Query: 118 PAGVVLMKEKAGF---------KFTTRVQPLRLAEWDTEDKVK-FFMSGRNYTLRDFEKI 167
A GF F TR Q + + + SG Y+ +FE
Sbjct: 73 AARAAARVRDGGFGACDYDGGPTFATRQQQIGFCPRKQRPVQRPVWQSGEEYSFGEFEFK 132
Query: 168 ANKIFARRYCSAGG----LPPTYLEKEFWHEIGCGKMETVEYACDVDGSAF--------- 214
A K F + Y G L +E +W K +VEYA D+ GSAF
Sbjct: 133 A-KNFEKNYLKKCGKKSQLSALEIETLYWRAT-VDKPFSVEYANDMPGSAFIPLSLAAAR 190
Query: 215 ---SSSPTDPLGNSKWNLKKLSRLPKSILRFLETSIPGVTEPMLYIGMLFSMFAWHVEDH 271
S +G + WN++ +SR S+L+F++ IPGVT PM+Y+ M+FS FAWHVEDH
Sbjct: 191 RRESGGEGGTVGETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWHVEDH 250
Query: 272 YLYSINYQHCGASKTWYGIPGQEALEFERVVREHVYTTDILSSDGEDGAFDVLLGKTTLF 331
L+S+NY H GA KTWYG+P AL FE VVR H Y ++ F L KTT+
Sbjct: 251 DLHSLNYLHMGAGKTWYGVPKDAALAFEEVVRVHGYGEEL----NPLVTFSTLGEKTTVM 306
Query: 332 PPNILLEHGVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGATASR 391
P + ++ G+P + VQ PGEF++TFP AYH+GFSHGFN GEA N A +W + A+
Sbjct: 307 SPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWLRMAKDAAI 366
Query: 392 RYAFLNRVPLLPHEELL 408
R A +N P++ H +LL
Sbjct: 367 RRAAINYPPMVSHLQLL 383
>AT2G34880.1 | Symbols: MEE27, PKDM7C | Transcription factor jumonji
(jmj) family protein / zinc finger (C5HC2 type) family
protein | chr2:14711880-14716634 REVERSE LENGTH=806
Length = 806
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 258/574 (44%), Gaps = 90/574 (15%)
Query: 45 GMGLQGSADAFSKRKVDKFDTSNLEWTDKIMECPVYSPTKEEFQDPLIYLQKIAPEASKY 104
G ++ + + + + ++D +N + D I E PV+ PT EEF+D L Y++KI P A +
Sbjct: 30 GTNVEPPSSPYHPKVLARWDPANEKRPD-IGEAPVFHPTSEEFEDTLAYIEKIRPLAESF 88
Query: 105 GICKIVSPLSASVPA---GVVLMKEKAGFKFTTRVQPLRLAE------------------ 143
GIC+IV P + S P G + K K F TRVQ + L +
Sbjct: 89 GICRIVPPSNWSPPCRLKGDSIWKNK---NFPTRVQFVDLLQNRGPVKKKTPKGRKRKRG 145
Query: 144 ----------------------WDTEDKVKFFMSGRNYTLRDFEKIANKI---FARRYCS 178
TE++ F SG +TL FEK A + R +
Sbjct: 146 KYSRTVAPKKRNGSVSKSVSTPKATEEENFGFESGPEFTLEKFEKYAQDFKDSYFERKDN 205
Query: 179 AGGLPPTYLEKEFWHEIGCGKMET-VEYACDVD----GSAFSSS---PT-----DPLGNS 225
G +E E+W I E V Y D++ GS FS PT D +S
Sbjct: 206 VGDPSVEEIEGEYWRIIEKETNEVKVLYGTDLENPILGSGFSKGVKIPTRRNDMDKYISS 265
Query: 226 KWNLKKLSRLPKSILRFLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASK 285
WNL L+RL S+L F + I GV P LY+GM FS F WHVED++LYS+NY H G K
Sbjct: 266 GWNLNNLARLQGSLLSFEDCEISGVQVPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPK 325
Query: 286 TWYGIPGQEALEFERVVREHVYTTDILSSDGEDGAFDVLLGKTTLFPPNILLEHGVPVYK 345
WYG+PG A E+ +R+H+ D D D+L T F P IL GVPVY+
Sbjct: 326 VWYGVPGSHATGLEKAMRKHL-------PDLFDEQPDLLHELVTQFSPTILKNEGVPVYR 378
Query: 346 AVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGATASRRYAFLNRVPLLPHE 405
AVQ GE+++TFPRAYH+GF+ GFNC EAVN A DW G A Y+ R L H+
Sbjct: 379 AVQNAGEYVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQNAVEIYSQETRKTSLSHD 438
Query: 406 ELLCKEAMRLCKCLELEDPD---------FPSLDLISHNSTKISF-VNLMRFQHCARWFL 455
++L A K L D F D I + + + R + F
Sbjct: 439 KILLGAAFEAVKSLSAHGEDNTKRFSWKRFCGKDGIITKAIEARLRMEEKRIEALGNGF- 497
Query: 456 MKSRVRINLSLHSHGTILCSLCKRDCYIAYVDC-NCH--EHPVCVRHDVESLAFKCGSKH 512
S V+++ S+ C C D +++ C NC E C +HD+ S G
Sbjct: 498 --SLVKMDKDFDSNCERECISCFSDLHLSATGCKNCSSLEEYGCTKHDICSCE---GKDR 552
Query: 513 TLRLREDIVNMEDAAKKFEQE-DGVLEELSKQTE 545
+ LR I + + E E D + LSK E
Sbjct: 553 FIFLRYTIDELSSLVRALEGESDDLKAWLSKVME 586
>AT4G20400.1 | Symbols: JMJ14, PKDM7B | JUMONJI 14 |
chr4:11009004-11013588 FORWARD LENGTH=954
Length = 954
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 196/411 (47%), Gaps = 74/411 (18%)
Query: 74 IMECPVYSPTKEEFQDPLIYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAGFKFT 133
+ + P++ PT E+F DPL Y++K+ +A YGIC+IV P++ P + K KF
Sbjct: 53 VDDAPIFYPTNEDFDDPLGYIEKLRSKAESYGICRIVPPVAWRPPCPLKEKKIWENSKFP 112
Query: 134 TRVQPLRLAE----------------------------------------WDTEDKVKFF 153
TR+Q + L + D+E K F
Sbjct: 113 TRIQFIDLLQNREPIKKSTKTKKRKRRRISKIGYTRRKRDSGCDTASSGSSDSEGKFGF- 171
Query: 154 MSGRNYTLRDFEKIANKIFARRYCSAGGLPPTY-------------LEKEFWHEIGCGKM 200
+G ++TL +F+K ++ F Y + P + LE E+W +
Sbjct: 172 QTGPDFTLEEFQKY-DEYFKECYFQSEDHPGSKASENKKFKPKVKDLEGEYWRIVEQATD 230
Query: 201 ET-VEYACDVDGSAFSS-----------SPTDPLGNSKWNLKKLSRLPKSILRFLETSIP 248
E V Y D++ F S S D WNL LSRLP S+L F I
Sbjct: 231 EVEVYYGADLETKKFGSGFPKYKPGYPISEADQYSQCGWNLNNLSRLPGSVLAFESCDIS 290
Query: 249 GVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGQEALEFERVVREHVYT 308
GV P LY+GM FS F WHVEDH+LYS+NY H G K WYGIPG A FE V+++ +
Sbjct: 291 GVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRL-- 348
Query: 309 TDILSSDGEDGAFDVLLGKTTLFPPNILLEHGVPVYKAVQKPGEFIITFPRAYHAGFSHG 368
D+ D+L T P IL E GVPVY+AVQ+ GEFI+TFP+AYH+GF+ G
Sbjct: 349 PDLFEEQP-----DLLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCG 403
Query: 369 FNCGEAVNFALGDWFPLGATASRRYAFLNRVPLLPHEELLCKEAMRLCKCL 419
FNC EAVN A DW G A Y+ R L H++LL AM CL
Sbjct: 404 FNCAEAVNVAPVDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCL 454
>AT1G30810.2 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr1:10938139-10941505 REVERSE LENGTH=819
Length = 819
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 236/512 (46%), Gaps = 108/512 (21%)
Query: 74 IMECPVYSPTKEEFQDPLIYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAGF--- 130
I + PV++P+ EEF DPL Y++KI P A YGIC+I+ P + P +KEK+ +
Sbjct: 56 INDAPVFTPSLEEFVDPLAYIEKIRPLAEPYGICRIIPPSTWKPPCR---LKEKSIWEQT 112
Query: 131 KFTTRVQPLRLAE-------------------------------------WDTEDKVKF- 152
KF TR+Q + L + E + KF
Sbjct: 113 KFPTRIQTVDLLQNREPMKKKPKSRKRKRRRNSRMGSSKRRSGSSPAESTSSPEAEEKFG 172
Query: 153 FMSGRNYTLRDFEKIA----NKIFARRYCSAGG----LPPTY--LEKEFWHEIGCGKMET 202
F SG ++TL +FEK A + F ++ +GG P+ +E E+W + E
Sbjct: 173 FNSGSDFTLDEFEKYALHFKDSYFEKK--DSGGDIVKWTPSVDDIEGEYWRIVEQPTDEV 230
Query: 203 -VEYACDVDGSA-----------FSSSPTDPLGNSKWNLKKLSRLPKSILRFLETSIPGV 250
V Y D++ F+ S + S WNL L RLP S+L F + I GV
Sbjct: 231 EVYYGADLENGVLGSGFYKRAEKFTGSDMEQYTLSGWNLNNLPRLPGSVLSFEDCDISGV 290
Query: 251 TEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGQEALEFERVVREHVYTTD 310
P LY+GM FS F WHVEDH+LYS+NY H G K WYG+PG A E+ +R+H+ D
Sbjct: 291 LVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMRKHL--PD 348
Query: 311 ILSSDGEDGAFDVLLGKTTLFPPNILLEHGVPVYKAVQKPGEFIITFPRAYHAGFSHGFN 370
+ D+L G T F P+IL + GV Y+ VQ GE+++TFPRAYHAGF+ GFN
Sbjct: 349 LFEEQP-----DLLHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFN 403
Query: 371 CGEAVNFALGDWFPLGATASRRYAFLNRVPLLPHEELLCKEAMRLCKCLELEDPDFPSLD 430
C EAVN A DW G A Y+ R L H++LL A K L
Sbjct: 404 CAEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKLLLGAAYEAVKALW---------- 453
Query: 431 LISHNSTKISFVNLMRFQHC-----------ARWFLMKSRV----RINLSLHSHGTILCS 475
+S + K + NL C AR + + R+ R + SL S
Sbjct: 454 ELSASEGKENTTNLRWKSFCGKNGTLTNAIQARLQMEEGRITALGRDSSSLKKMEKDFDS 513
Query: 476 LCKRDCYIAYVD-------CNCH-EHPVCVRH 499
C+R+C+ + D C C E C++H
Sbjct: 514 NCERECFSCFYDLHLSASGCKCSPEEYACLKH 545
>AT1G30810.1 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr1:10938139-10941505 REVERSE LENGTH=819
Length = 819
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 236/512 (46%), Gaps = 108/512 (21%)
Query: 74 IMECPVYSPTKEEFQDPLIYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAGF--- 130
I + PV++P+ EEF DPL Y++KI P A YGIC+I+ P + P +KEK+ +
Sbjct: 56 INDAPVFTPSLEEFVDPLAYIEKIRPLAEPYGICRIIPPSTWKPPCR---LKEKSIWEQT 112
Query: 131 KFTTRVQPLRLAE-------------------------------------WDTEDKVKF- 152
KF TR+Q + L + E + KF
Sbjct: 113 KFPTRIQTVDLLQNREPMKKKPKSRKRKRRRNSRMGSSKRRSGSSPAESTSSPEAEEKFG 172
Query: 153 FMSGRNYTLRDFEKIA----NKIFARRYCSAGG----LPPTY--LEKEFWHEIGCGKMET 202
F SG ++TL +FEK A + F ++ +GG P+ +E E+W + E
Sbjct: 173 FNSGSDFTLDEFEKYALHFKDSYFEKK--DSGGDIVKWTPSVDDIEGEYWRIVEQPTDEV 230
Query: 203 -VEYACDVDGSA-----------FSSSPTDPLGNSKWNLKKLSRLPKSILRFLETSIPGV 250
V Y D++ F+ S + S WNL L RLP S+L F + I GV
Sbjct: 231 EVYYGADLENGVLGSGFYKRAEKFTGSDMEQYTLSGWNLNNLPRLPGSVLSFEDCDISGV 290
Query: 251 TEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGQEALEFERVVREHVYTTD 310
P LY+GM FS F WHVEDH+LYS+NY H G K WYG+PG A E+ +R+H+ D
Sbjct: 291 LVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMRKHL--PD 348
Query: 311 ILSSDGEDGAFDVLLGKTTLFPPNILLEHGVPVYKAVQKPGEFIITFPRAYHAGFSHGFN 370
+ D+L G T F P+IL + GV Y+ VQ GE+++TFPRAYHAGF+ GFN
Sbjct: 349 LFEEQP-----DLLHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFN 403
Query: 371 CGEAVNFALGDWFPLGATASRRYAFLNRVPLLPHEELLCKEAMRLCKCLELEDPDFPSLD 430
C EAVN A DW G A Y+ R L H++LL A K L
Sbjct: 404 CAEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKLLLGAAYEAVKALW---------- 453
Query: 431 LISHNSTKISFVNLMRFQHC-----------ARWFLMKSRV----RINLSLHSHGTILCS 475
+S + K + NL C AR + + R+ R + SL S
Sbjct: 454 ELSASEGKENTTNLRWKSFCGKNGTLTNAIQARLQMEEGRITALGRDSSSLKKMEKDFDS 513
Query: 476 LCKRDCYIAYVD-------CNCH-EHPVCVRH 499
C+R+C+ + D C C E C++H
Sbjct: 514 NCERECFSCFYDLHLSASGCKCSPEEYACLKH 545
>AT1G08620.2 | Symbols: PKDM7D | Transcription factor jumonji (jmj)
family protein / zinc finger (C5HC2 type) family protein
| chr1:2737554-2743370 FORWARD LENGTH=1209
Length = 1209
Score = 224 bits (570), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 195/415 (46%), Gaps = 78/415 (18%)
Query: 74 IMECPVYSPTKEEFQDPLIYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAGFKFT 133
+ + PV+ P++EEF+D L Y+ KI PEA KYGIC+IV P S P + + G KFT
Sbjct: 143 LEDAPVFYPSEEEFEDTLNYIAKIRPEAEKYGICRIVPPPSWKPPCPLKEKQVWEGSKFT 202
Query: 134 TRVQ------------------------------------------PLRLAEWDTEDKVK 151
TRVQ P + E +
Sbjct: 203 TRVQRVDKLQNRSSMKKISKLPNQMRKKKRKCMKMGMDSVTNGMGDPCSASTGMNELETF 262
Query: 152 FFMSGRNYTLRDFEKIANKIFARRY----------CSAGGLPPTY------LEKEFWHEI 195
F G +TL+DF+K A++ A+ + C + +E E+W +
Sbjct: 263 GFEPGPGFTLKDFQKYADEFKAQYFKKSETSTDDKCKVDNSIDCWEPALEDVEGEYWRIV 322
Query: 196 GCGKMET-VEYACDVDGSAFSSS------------PTDPLGNSKWNLKKLSRLPKSILRF 242
E V Y D++ F S D S WNL RLP S+L++
Sbjct: 323 DKATEEIEVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKY 382
Query: 243 LETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGQEALEFERVV 302
+ I GV P LYIGM FS F WHVEDH+LYS+NY H GA K WYG+ G++A++ E +
Sbjct: 383 EGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAM 442
Query: 303 REHVYTTDILSSDGEDGAFDVLLGKTTLFPPNILLEHGVPVYKAVQKPGEFIITFPRAYH 362
R+H+ D + D+L T P+ L GVPV++ VQ GEF++TFPRAYH
Sbjct: 443 RKHL-------PDLFEEQPDLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYH 495
Query: 363 AGFSHGFNCGEAVNFALGDWFPLGATASRRYAFLNRVPLLPHEELLCKEAMRLCK 417
AGF+ GFNC EAVN A DW P G A Y R + H++LL A + K
Sbjct: 496 AGFNSGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVK 550
>AT1G08620.1 | Symbols: PKDM7D | Transcription factor jumonji (jmj)
family protein / zinc finger (C5HC2 type) family protein
| chr1:2737554-2743370 FORWARD LENGTH=1209
Length = 1209
Score = 224 bits (570), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 195/415 (46%), Gaps = 78/415 (18%)
Query: 74 IMECPVYSPTKEEFQDPLIYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAGFKFT 133
+ + PV+ P++EEF+D L Y+ KI PEA KYGIC+IV P S P + + G KFT
Sbjct: 143 LEDAPVFYPSEEEFEDTLNYIAKIRPEAEKYGICRIVPPPSWKPPCPLKEKQVWEGSKFT 202
Query: 134 TRVQ------------------------------------------PLRLAEWDTEDKVK 151
TRVQ P + E +
Sbjct: 203 TRVQRVDKLQNRSSMKKISKLPNQMRKKKRKCMKMGMDSVTNGMGDPCSASTGMNELETF 262
Query: 152 FFMSGRNYTLRDFEKIANKIFARRY----------CSAGGLPPTY------LEKEFWHEI 195
F G +TL+DF+K A++ A+ + C + +E E+W +
Sbjct: 263 GFEPGPGFTLKDFQKYADEFKAQYFKKSETSTDDKCKVDNSIDCWEPALEDVEGEYWRIV 322
Query: 196 GCGKMET-VEYACDVDGSAFSSS------------PTDPLGNSKWNLKKLSRLPKSILRF 242
E V Y D++ F S D S WNL RLP S+L++
Sbjct: 323 DKATEEIEVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKY 382
Query: 243 LETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGQEALEFERVV 302
+ I GV P LYIGM FS F WHVEDH+LYS+NY H GA K WYG+ G++A++ E +
Sbjct: 383 EGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAM 442
Query: 303 REHVYTTDILSSDGEDGAFDVLLGKTTLFPPNILLEHGVPVYKAVQKPGEFIITFPRAYH 362
R+H+ D + D+L T P+ L GVPV++ VQ GEF++TFPRAYH
Sbjct: 443 RKHL-------PDLFEEQPDLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYH 495
Query: 363 AGFSHGFNCGEAVNFALGDWFPLGATASRRYAFLNRVPLLPHEELLCKEAMRLCK 417
AGF+ GFNC EAVN A DW P G A Y R + H++LL A + K
Sbjct: 496 AGFNSGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVK 550
>AT4G20400.2 | Symbols: JMJ14, PKDM7B | JUMONJI 14 |
chr4:11009753-11013588 FORWARD LENGTH=897
Length = 897
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 189/400 (47%), Gaps = 74/400 (18%)
Query: 85 EEFQDPLIYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAE- 143
++F DPL Y++K+ +A YGIC+IV P++ P + K KF TR+Q + L +
Sbjct: 7 QDFDDPLGYIEKLRSKAESYGICRIVPPVAWRPPCPLKEKKIWENSKFPTRIQFIDLLQN 66
Query: 144 ---------------------------------------WDTEDKVKFFMSGRNYTLRDF 164
D+E K F +G ++TL +F
Sbjct: 67 REPIKKSTKTKKRKRRRISKIGYTRRKRDSGCDTASSGSSDSEGKFGF-QTGPDFTLEEF 125
Query: 165 EKIANKIFARRYCSAGGLPPTY-------------LEKEFWHEIGCGKMET-VEYACDVD 210
+K ++ F Y + P + LE E+W + E V Y D++
Sbjct: 126 QKY-DEYFKECYFQSEDHPGSKASENKKFKPKVKDLEGEYWRIVEQATDEVEVYYGADLE 184
Query: 211 GSAFSS-----------SPTDPLGNSKWNLKKLSRLPKSILRFLETSIPGVTEPMLYIGM 259
F S S D WNL LSRLP S+L F I GV P LY+GM
Sbjct: 185 TKKFGSGFPKYKPGYPISEADQYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGM 244
Query: 260 LFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGQEALEFERVVREHVYTTDILSSDGEDG 319
FS F WHVEDH+LYS+NY H G K WYGIPG A FE V+++ + D+
Sbjct: 245 CFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRL--PDLFEEQP--- 299
Query: 320 AFDVLLGKTTLFPPNILLEHGVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFAL 379
D+L T P IL E GVPVY+AVQ+ GEFI+TFP+AYH+GF+ GFNC EAVN A
Sbjct: 300 --DLLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAP 357
Query: 380 GDWFPLGATASRRYAFLNRVPLLPHEELLCKEAMRLCKCL 419
DW G A Y+ R L H++LL AM CL
Sbjct: 358 VDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCL 397
>AT5G04240.1 | Symbols: ELF6 | Zinc finger (C2H2 type) family
protein / transcription factor jumonji (jmj) family
protein | chr5:1169544-1174638 FORWARD LENGTH=1340
Length = 1340
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 127/187 (67%), Gaps = 4/187 (2%)
Query: 222 LGNSKWNLKKLSRLPKSILRFLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHC 281
L NS WNL+ ++R P S+ RF+ IPGVT PM+YIGMLFS FAWHVEDH L+S+NY H
Sbjct: 260 LSNSSWNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHT 319
Query: 282 GASKTWYGIPGQEALEFERVVREHVYTTDILSSDGEDGAFDVLLGKTTLFPPNILLEHGV 341
G+ KTWY +P AL+FE V+R++ Y +I + A L KTTL P +++ G+
Sbjct: 320 GSPKTWYAVPCDYALDFEEVIRKNSYGRNI----DQLAALTQLGEKTTLVSPEMIVASGI 375
Query: 342 PVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGATASRRYAFLNRVPL 401
P + VQ PGEF++TFPR+YH GFSHGFNCGEA NF W + A+ R A +N +P+
Sbjct: 376 PCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRRAAMNYLPM 435
Query: 402 LPHEELL 408
L H++LL
Sbjct: 436 LSHQQLL 442
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 74/176 (42%), Gaps = 32/176 (18%)
Query: 70 WTDKIMECPVYSPTKEEFQDPLIYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAG 129
W + PV+ PT EF DP+ Y+ KI EAS +GICKI+ PL V K+
Sbjct: 9 WLKALPLAPVFRPTDTEFADPIAYISKIEKEASAFGICKIIPPLPKPSKKYVFYNLNKSL 68
Query: 130 FK--------------------FTTRVQPL-RLAEWDTEDKVK----------FFMSGRN 158
K FTTR Q L + + + +K K + SG
Sbjct: 69 LKCPELVSDVDISKVCKEDRAVFTTRQQELGQTVKKNKGEKGKSNSQRSGVKQVWQSGGV 128
Query: 159 YTLRDFEKIANKIFARRYCSAGGLPPTYLEKEFWHEIGCGKMETVEYACDVDGSAF 214
YTL FE + + + + L P +E FW + K +EYA DV GSAF
Sbjct: 129 YTLDQFEAKSKAFYKTQLGTVKELAPVVIEALFW-KAALEKPIYIEYANDVPGSAF 183
>AT1G63490.1 | Symbols: | transcription factor jumonji (jmjC)
domain-containing protein | chr1:23544938-23551946
REVERSE LENGTH=1116
Length = 1116
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 119/197 (60%), Gaps = 7/197 (3%)
Query: 220 DPLGNSKWNLKKLSRLPKSILRFLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQ 279
D S WNL + +L S+L+ + +I GVT P LY+GMLFS F WH EDH YS+NY
Sbjct: 32 DEYCGSPWNLNNMPKLKGSMLQAIRHNINGVTVPWLYLGMLFSSFCWHFEDHCFYSVNYL 91
Query: 280 HCGASKTWYGIPGQEALEFERVVREHVYTTDILSSDGEDGAFDVLLGKTTLFPPNILLEH 339
H G +K WYGIPG A FE+V+R+ + D D D+L T+ P +L E+
Sbjct: 92 HWGEAKCWYGIPGSAASAFEKVMRKTL-------PDLFDAQPDLLFQLVTMLSPTVLQEN 144
Query: 340 GVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGATASRRYAFLNRV 399
VPVY +Q+PG F+ITFP+++HAGF+ G NC EAVNFA DW P G + + Y +
Sbjct: 145 KVPVYTVLQEPGNFVITFPKSFHAGFNFGLNCAEAVNFATADWLPYGGSGAELYRLYRKP 204
Query: 400 PLLPHEELLCKEAMRLC 416
++ HEELLC A C
Sbjct: 205 SVISHEELLCVVAKGNC 221
>AT2G38950.1 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr2:16261599-16265044 FORWARD LENGTH=708
Length = 708
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 225/506 (44%), Gaps = 65/506 (12%)
Query: 71 TDKIMECPVYSPTKEEFQDPLIYLQKIAPEASKYGICKIVSPLSASVPAGVVLMKEKAGF 130
T + E PV++PT+EEF+D L Y+ + A YGIC +V P S P L+KEK +
Sbjct: 102 TKVLEEAPVFNPTEEEFRDTLSYISSLRDRAEPYGICCVVPPPSWKPPC---LLKEKQIW 158
Query: 131 KFTTRVQPLRLAEWDTED-KVKFFMS------------------GRNYTLRDFEKIANKI 171
+ +T ++L TE+ K+K + G YTL+ F+ A+
Sbjct: 159 EASTFFPQVQLFGIQTENRKIKKEVDADSNDAASEGVQLCRVERGPGYTLKSFKNFADTY 218
Query: 172 FARRYC----------SAGGLPPTYL-----EKEFWHEIGCGKMET-VEYACDVDGSAFS 215
+ S+ L P L EKE+ + +E V Y D+D + F
Sbjct: 219 KKSHFGMKDEVLGSENSSPSLKPNELIVADIEKEYRQIVESPLIEIGVLYGNDLDTATFG 278
Query: 216 S-----SPTDPLG-NSKWNLKKLSRLPKSILRFLETSIPGVTEPMLYIGMLFSMFAWHVE 269
S +P++ +S WNL ++LP S+L + V P L +GM S W E
Sbjct: 279 SGFPLSAPSESSKYSSGWNLNSTAKLPGSLLSLEDCE--SVCVPRLSVGMCLSSQFWKSE 336
Query: 270 DHYLYSINYQHCGASKTWYGIPGQEALEFERVVREHVYTTDILSSDGEDGAFDVLLGKTT 329
LYS+ Y H GA + WY + G +F+ ++ IL GE
Sbjct: 337 KERLYSLCYLHVGAPRVWYSVAGCHRSKFKAAMKSF-----ILEMSGEQPKKS--HNPVM 389
Query: 330 LFPPNILLEHGVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGATA 389
+ P L G+PV + VQ PG+++I FP +Y++ F GFNC E NFA DW P G A
Sbjct: 390 MMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFDCGFNCLEKANFAPLDWLPHGDIA 449
Query: 390 SRRYAFLNRVPLLPHEELLCKEAMRLCKCLE---LEDPDFPSLDLISHN-STKISFVNL- 444
+ +++ L+ +++LL A KCL+ L + + + T F N+
Sbjct: 450 VQVNQEMSKTSLISYDKLLFSAAREAVKCLKEYGLSKKNTACYTRWNDSCGTDGLFSNII 509
Query: 445 ---MRFQHCARWFLMKS--RVRINLSLHSHGTILCSLCKRDCYIAYVDCNCHEHPV-CVR 498
++ + R FL+ S R++ S + C +C D Y++ V+C+C + C+
Sbjct: 510 KSRIKLEKNRREFLISSLESQRMDKSYDAVNKRECCVCLGDLYLSAVNCSCSANRYSCLN 569
Query: 499 HDVESLAFKCGSKHTL-RLREDIVNM 523
H + A C K L R D +N+
Sbjct: 570 HMRKLCACPCDRKSFLYRYTMDELNL 595