Miyakogusa Predicted Gene

Lj2g3v1497160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1497160.1 tr|B9GZI1|B9GZI1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_757200 PE=4
SV=1,75,8e-19,seg,NULL,CUFF.37272.1
         (109 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32310.1 | Symbols:  | unknown protein; Has 28 Blast hits to ...    88   1e-18

>AT1G32310.1 | Symbols:  | unknown protein; Has 28 Blast hits to
          28 proteins in 9 species: Archae - 0; Bacteria - 0;
          Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
          Eukaryotes - 0 (source: NCBI BLink). |
          chr1:11653619-11654538 FORWARD LENGTH=100
          Length = 100

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/60 (71%), Positives = 48/60 (80%)

Query: 29 FDDLHFPFDPISTQERKDEVMLVLKSDIMAALDKEVKSLDEDNWKFEGPRSRINLTSRRG 88
           DD HFP D  S QERKDE M VLK+D+M  LDKEVKSL+ED+W FEGPRSRI+L SRRG
Sbjct: 29 LDDFHFPPDIPSMQERKDEAMRVLKADLMTELDKEVKSLEEDSWMFEGPRSRIHLISRRG 88