Miyakogusa Predicted Gene

Lj2g3v1485060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1485060.1 Non Chatacterized Hit- tr|C6TKM1|C6TKM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55782
PE,89.52,0,UNCHARACTERIZED,NULL; SNARE_assoc,SNARE associated Golgi
protein,CUFF.37262.1
         (210 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17790.1 | Symbols:  | SNARE associated Golgi protein family ...   359   e-100
AT1G71940.1 | Symbols:  | SNARE associated Golgi protein family ...   314   3e-86
AT4G09580.1 | Symbols:  | SNARE associated Golgi protein family ...   299   1e-81
AT1G71940.2 | Symbols:  | SNARE associated Golgi protein family ...   295   1e-80
AT1G03260.1 | Symbols:  | SNARE associated Golgi protein family ...    51   7e-07
AT1G22850.1 | Symbols:  | SNARE associated Golgi protein family ...    50   1e-06

>AT4G17790.1 | Symbols:  | SNARE associated Golgi protein family |
           chr4:9891425-9892675 FORWARD LENGTH=264
          Length = 264

 Score =  359 bits (922), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/210 (81%), Positives = 195/210 (92%)

Query: 1   MPDSDYSFLKFPHTLEDLKLLRDNLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSL 60
           MP SDYSFLK P  LEDL++LRDNLE YTSDYT QVLVGYC+VY+FMQTFMIPGTVFMSL
Sbjct: 55  MPQSDYSFLKLPRNLEDLQILRDNLEIYTSDYTVQVLVGYCLVYVFMQTFMIPGTVFMSL 114

Query: 61  LAGALFGVFKGVALVVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGL 120
           LAGALFGV KG+ALVV  ATAGASSC+FLSK++GRPLL +LWPDKL+FFQ+QVA+R+  L
Sbjct: 115 LAGALFGVVKGMALVVSTATAGASSCYFLSKLIGRPLLFSLWPDKLVFFQDQVARRKDRL 174

Query: 121 LNYMLFLRLTPTLPNTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAGLALGELKSV 180
           LNYMLFLRLTPTLPNTFIN ASP+V+VPYHIFF+AT IGLIPAA+VTVRAGLALGELKS+
Sbjct: 175 LNYMLFLRLTPTLPNTFINVASPIVDVPYHIFFLATFIGLIPAAFVTVRAGLALGELKSL 234

Query: 181 GDLYDFNSVATLCLIGVVSITPTLISKKES 210
           GDLYDF+S+ATLCLIGV+S+TPTLI KK++
Sbjct: 235 GDLYDFSSMATLCLIGVLSVTPTLIGKKQA 264


>AT1G71940.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:27078781-27079948 FORWARD LENGTH=272
          Length = 272

 Score =  314 bits (804), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 144/209 (68%), Positives = 181/209 (86%)

Query: 1   MPDSDYSFLKFPHTLEDLKLLRDNLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSL 60
           MP +++  LK P +L DL+LL+DNL  Y ++Y AQ ++GYC  YIFMQTFMIPGT+FMSL
Sbjct: 61  MPAAEFGKLKLPRSLADLRLLKDNLANYANEYPAQFVLGYCATYIFMQTFMIPGTIFMSL 120

Query: 61  LAGALFGVFKGVALVVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGL 120
           LAGALFGVFKGV LVVFNATAGA+SCFFLSK++GRPL++ LWPDKL FFQ +++KRR  L
Sbjct: 121 LAGALFGVFKGVVLVVFNATAGATSCFFLSKLIGRPLITWLWPDKLRFFQAEISKRRDKL 180

Query: 121 LNYMLFLRLTPTLPNTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAGLALGELKSV 180
           LNYMLFLR+TPTLPN FIN ASP+V+VP+H+FF+AT+IGLIPAAY+TVRAGLA+G+LKSV
Sbjct: 181 LNYMLFLRITPTLPNLFINLASPIVDVPFHVFFLATLIGLIPAAYITVRAGLAIGDLKSV 240

Query: 181 GDLYDFNSVATLCLIGVVSITPTLISKKE 209
            DLYDF +++ L LIG +SI PT++ +K+
Sbjct: 241 KDLYDFKTLSVLFLIGFISILPTILKRKK 269


>AT4G09580.1 | Symbols:  | SNARE associated Golgi protein family |
           chr4:6052721-6054313 REVERSE LENGTH=287
          Length = 287

 Score =  299 bits (765), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 136/209 (65%), Positives = 176/209 (84%)

Query: 1   MPDSDYSFLKFPHTLEDLKLLRDNLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSL 60
           MP ++Y  LK P T+ DL+LL++NL +Y S+Y A+ ++GYC  YIFMQTFMIPGT+FMSL
Sbjct: 76  MPAAEYGKLKVPRTISDLRLLKENLGSYASEYQARFILGYCSTYIFMQTFMIPGTIFMSL 135

Query: 61  LAGALFGVFKGVALVVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGL 120
           LAGALFGV +G  LVV NATAGA SCFFLSK+VGRPL++ LWP+KL FFQ ++AKRR  L
Sbjct: 136 LAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWLWPEKLRFFQAEIAKRRDRL 195

Query: 121 LNYMLFLRLTPTLPNTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAGLALGELKSV 180
           LNYMLFLR+TPTLPN FIN +SP+V++P+H+FF+AT++GL+PA+Y+TVRAGLALG+L+SV
Sbjct: 196 LNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASYITVRAGLALGDLRSV 255

Query: 181 GDLYDFNSVATLCLIGVVSITPTLISKKE 209
            DLYDF +++ L LIG +SI P L+ +K 
Sbjct: 256 KDLYDFKTLSVLFLIGSISIFPALLKRKR 284


>AT1G71940.2 | Symbols:  | SNARE associated Golgi protein family |
           chr1:27078781-27080191 FORWARD LENGTH=306
          Length = 306

 Score =  295 bits (755), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 135/188 (71%), Positives = 165/188 (87%)

Query: 1   MPDSDYSFLKFPHTLEDLKLLRDNLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSL 60
           MP +++  LK P +L DL+LL+DNL  Y ++Y AQ ++GYC  YIFMQTFMIPGT+FMSL
Sbjct: 61  MPAAEFGKLKLPRSLADLRLLKDNLANYANEYPAQFVLGYCATYIFMQTFMIPGTIFMSL 120

Query: 61  LAGALFGVFKGVALVVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGL 120
           LAGALFGVFKGV LVVFNATAGA+SCFFLSK++GRPL++ LWPDKL FFQ +++KRR  L
Sbjct: 121 LAGALFGVFKGVVLVVFNATAGATSCFFLSKLIGRPLITWLWPDKLRFFQAEISKRRDKL 180

Query: 121 LNYMLFLRLTPTLPNTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAGLALGELKSV 180
           LNYMLFLR+TPTLPN FIN ASP+V+VP+H+FF+AT+IGLIPAAY+TVRAGLA+G+LKSV
Sbjct: 181 LNYMLFLRITPTLPNLFINLASPIVDVPFHVFFLATLIGLIPAAYITVRAGLAIGDLKSV 240

Query: 181 GDLYDFNS 188
            DLYDF +
Sbjct: 241 KDLYDFKT 248


>AT1G03260.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:795678-798102 REVERSE LENGTH=274
          Length = 274

 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 2/140 (1%)

Query: 41  CVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFNATAGASSCFFLSKVVGRPLLST 100
            + YI +    +P +V ++L  G LFG+  G       AT GA++ F L + +G+  +++
Sbjct: 56  ALAYIPLTIVAVPASV-LTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTS 114

Query: 101 LWPDKLLFFQNQVAKRRKGLLNYMLFLRLTPTLPNTFINFASPVVNVPYHIFFIATVIGL 160
                  F    VA ++ G    +L LR+ P LP   +N+   V  V    + +AT +G+
Sbjct: 115 KIKHYPKFQAVSVAIQKSGF-KIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGM 173

Query: 161 IPAAYVTVRAGLALGELKSV 180
           +P  +  V  G  L +L  +
Sbjct: 174 MPITFALVYVGTTLKDLSDI 193


>AT1G22850.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:8080671-8082816 REVERSE LENGTH=344
          Length = 344

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 22  RDNLETYTSDYTAQV----LVGYCV---VYIFMQTFMIPGTVFMSLLAGALFGVFKGVAL 74
           RD + T+ + ++  +      GY +   VY  ++   IP  + +++ AG LFG   G  +
Sbjct: 131 RDQINTFLTQFSTYIEGYGTAGYALFIAVYAGLEILAIP-ALPLTMSAGLLFGPLIGTII 189

Query: 75  VVFNATAGASSCFFLSKVVGRPLLSTLWPDKLLFFQNQVAKRRKGLLNYMLFLRLTPTLP 134
           V  + T  AS  F +++   R  +  L  D   F     A    G    +  LRL+P LP
Sbjct: 190 VSISGTMAASVAFLIARYFARERILKLVEDNKKFLAIDKAIGENGF-RVVTLLRLSPLLP 248

Query: 135 NTFINFASPVVNVPYHIFFIATVIGLIPAAYVTVRAG 171
            +  N+   + +V +  + + + +G++P ++  V AG
Sbjct: 249 FSLGNYLYGLTSVKFVPYVLGSWLGMLPGSWAYVSAG 285