Miyakogusa Predicted Gene

Lj2g3v1469810.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1469810.1 Non Chatacterized Hit- tr|I1LHZ8|I1LHZ8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,59.46,0.0000000000004,seg,NULL; DUF740,Uncharacterised protein
family UPF0503,CUFF.37237.1
         (217 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32690.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   100   9e-22
AT2G35200.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    85   5e-17

>AT1G32690.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: plasma membrane;
           EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
           growth stages; BEST Arabidopsis thaliana protein match
           is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast
           hits to 45 proteins in 8 species: Archae - 0; Bacteria -
           0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0;
           Other Eukaryotes - 0 (source: NCBI BLink). |
           chr1:11821079-11821681 REVERSE LENGTH=200
          Length = 200

 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 107/239 (44%), Gaps = 65/239 (27%)

Query: 5   IDEEEVWKCTKHPSKR---RKTGICATCLRDRLVILCPDCATVRPXXXXXXXXXX----- 56
           +DE+   +C+KH SKR      G+C  CL +RL  LCPDCA   P               
Sbjct: 1   MDEDGFSQCSKHFSKRGYFSGGGVCPFCLHERLSSLCPDCAHDLPCSCSSRAAVSFSPSS 60

Query: 57  -------------XXXXXXXXXXVGKVNNLIEKDPGLRRSRSLAIPFLRSRSRFSGGDRV 103
                                  VG+V +LIE +P  RRS+S+AIP           D V
Sbjct: 61  SSSSSSFSIFAGDISFNISGVGSVGRVASLIECEPAFRRSKSMAIPIKP--------DSV 112

Query: 104 LDPGTARESPAVNGSRSARSFWSMFKPPRSNKGSESEHGWDVKKVLAEELDVDGGDASQK 163
           +D G          S+   SFW +F   R +                          ++ 
Sbjct: 113 IDSGLDH-----GRSKKTSSFWRIFMGNRGD--------------------------TKP 141

Query: 164 AVMARSRSVAV---FGGDGELRPRT-KGRGWSFPSPMKVFRQSKASKVV-QERSPLYRG 217
           A+M +SRSVAV   FG      P T KG+GW+FPSP+KVFRQS+ SK++ Q+RSPLYRG
Sbjct: 142 AIMKKSRSVAVAGEFGFSPVPVPATGKGKGWNFPSPIKVFRQSRVSKMIFQQRSPLYRG 200


>AT2G35200.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G32690.1); Has 36 Blast hits to 36 proteins in
           8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr2:14833888-14834493 FORWARD
           LENGTH=201
          Length = 201

 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 103/229 (44%), Gaps = 51/229 (22%)

Query: 3   LYIDEE--EVW-KCTKHPSKRR-KTGICATCLRDRLVILCPDCATVRPXXXXXXXXXXXX 58
           L +DE    VW KC++H  +     G+C  CL +RL  LCPDCA   P            
Sbjct: 10  LRLDEGGGSVWQKCSRHEGRFVCVAGVCPYCLHERLSSLCPDCAHDLPCSCTPRASVSSR 69

Query: 59  ----XXXXXXXXVGKVNNLIEKDPGLRRSRSLAIPFLRSR--SRFSGGDRVLDPGTARES 112
                       VG+V NLIE +P  RRS S+  P+  S         ++ L PG     
Sbjct: 70  GEGDVSFARIGSVGRVANLIECEPAFRRSTSITGPYFWSAKPEPILETEKDLKPG----- 124

Query: 113 PAVNGSRSARSFWSMFKPPRSNKGSESEHGWDVKKVLAEELDVDGGDASQKAVMARSRSV 172
                    R  W +F   R N+  E+       K+ A +            VM +S SV
Sbjct: 125 -------RGRWLWRLF---RGNREEET-------KIKAAK------------VMKKSNSV 155

Query: 173 AVFGGDGELRPR---TKGRGWSFPSPMKVFRQSKASKVV-QERSPLYRG 217
           A   G+    P    +KG GW FPSP+KVFRQS+ SK++ Q+RSPLYRG
Sbjct: 156 A---GEVLFSPTPVTSKGNGWYFPSPIKVFRQSRVSKMIFQQRSPLYRG 201