Miyakogusa Predicted Gene
- Lj2g3v1468380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1468380.1 tr|G8A0H7|G8A0H7_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_103,40.74,2e-19,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.37218.1
(100 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-16
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 74 1e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-13
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-13
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 70 3e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-13
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 64 1e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-11
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 60 4e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-10
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-10
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 1e-09
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 1e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 57 2e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-09
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 56 5e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 55 8e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-08
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 54 2e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-08
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-08
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 53 4e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-08
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 5e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 52 6e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 52 9e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 52 1e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-07
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 51 2e-07
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-07
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-07
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 49 5e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 49 7e-07
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 49 7e-07
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 49 7e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 48 2e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 48 2e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 2e-06
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 47 2e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 47 3e-06
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 4e-06
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 4e-06
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 45 7e-06
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 85.1 bits (209), Expect = 9e-18, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K Y V++L QM+LKGI N T +I+I+C+C ++ AFS I K GY+P+ TF
Sbjct: 102 KQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITF 161
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVV 97
+TLING C G++ AL+L+ D +V++ KPD++
Sbjct: 162 STLINGLCLEGRVSEALELV-----DRMVEMGHKPDLI 194
Score = 60.5 bits (145), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M L+G++ + VT N LI +C LG++N A +F + R P++ T+ L++G
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G+ AL++ + E +++ D+ IY+
Sbjct: 483 LCDNGESEKALEIFEKIEKS---KMELDIGIYN 512
Score = 58.5 bits (140), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG PN T NILI+ YC +I+ +F + RG D T+ TLI GFC++G+
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 74 IRPALQLLRRAEDDELVQLK--PDVVIY 99
+ A +L + E+V K P++V Y
Sbjct: 454 LNVAKELFQ-----EMVSRKVPPNIVTY 476
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 2 KHYS--TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVF 59
KH S +L ++M++KGI N +T NILI +C+ G+ + + + KR P+V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 60 TFATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
TF+ LI+ F + G++R A +L + E++ + PD + Y+
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHK-----EMIHRGIAPDTITYT 372
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +GI P+ +T LID +C ++ A + + +G P++ TF LING+C
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 70 QMGQIRPALQLLRR 83
+ +I L+L R+
Sbjct: 415 KANRIDDGLELFRK 428
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M+ + I + V +I+ID C G ++ AF++F + +G ++ T+ LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC G+ +LLR D ++ P+VV +S
Sbjct: 308 FCNAGRWDDGAKLLR---DMIKRKINPNVVTFS 337
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M G P+ +T N L++ C G+ A + + + G QP+ T+ +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+N C+ GQ A++LLR+ E+ +K D V YS
Sbjct: 235 LNVMCKSGQTALAMELLRKMEER---NIKLDAVKYS 267
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + I PN VT ++LID + G++ A + + RG PD T+ +LI+GFC
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 70 QMGQIRPALQLL 81
+ + A Q++
Sbjct: 380 KENHLDKANQMV 391
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 82.8 bits (203), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 52/82 (63%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K Y V+ L QM+LKGI N T +I+I+C C +++ AFS I K GY+PD TF
Sbjct: 86 KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTF 145
Query: 62 ATLINGFCQMGQIRPALQLLRR 83
+TLING C G++ AL+L+ R
Sbjct: 146 STLINGLCLEGRVSEALELVDR 167
Score = 59.7 bits (143), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG PN T NILI+ YC I+ +F + RG D T+ TLI GFC++G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 74 IRPALQLLRRAEDDELV--QLKPDVVIY 99
+ A +L + E+V +++PD+V Y
Sbjct: 438 LEVAKELFQ-----EMVSRRVRPDIVSY 460
Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M L+G++ + VT N LI +C LG++ A +F + R +PD+ ++ L++G
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G+ AL++ + E +++ D+ IY+
Sbjct: 467 LCDNGEPEKALEIFEKIEKS---KMELDIGIYN 496
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M+ + I + V +I+ID C G ++ AF++F + +G++ D+ + TLI G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC G+ +LLR D ++ PDVV +S
Sbjct: 292 FCYAGRWDDGAKLLR---DMIKRKITPDVVAFS 321
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +GI P+ VT LID +C Q++ A + + +G P++ TF LING+C
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 70 QMGQIRPALQLLRR 83
+ I L+L R+
Sbjct: 399 KANLIDDGLELFRK 412
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M G P +T N L++ C G+++ A + + + G+QP+ T+ +
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ C+ GQ A++LLR+ E+ ++K D V YS
Sbjct: 219 LKVMCKSGQTALAMELLRKMEER---KIKLDAVKYS 251
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + I P+ V + LIDC+ G++ A + + +RG PD T+ +LI+GFC
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 70 QMGQIRPALQLL 81
+ Q+ A +L
Sbjct: 364 KENQLDKANHML 375
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L ++M++KG + + LI +C+ G+ + + + KR PDV F+ LI+ F
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 69 CQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ G++R A +L + E++Q + PD V Y+
Sbjct: 328 VKEGKLREAEELHK-----EMIQRGISPDTVTYT 356
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 27 NILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRAED 86
NI+I C+ +++ A+ +F ++ +G +PDV T+ +I G C+ G + A L R+ E+
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 87 D 87
D
Sbjct: 556 D 556
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K+Y VISL H M++ GI + + NI+I+C C + A SV + K GY+PDV T
Sbjct: 83 KNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTV 142
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++LINGFCQ ++ A+ L+ + E+ + +PDVVIY+
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKMEE---MGFRPDVVIYN 178
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S L M ++ I+PN +T +ID + G+ + A ++ + +R PDVFT+
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLK---PDVVIYS 100
+LING C G++ A Q+L +L+ K PDVV Y+
Sbjct: 284 SLINGLCMHGRVDEAKQML------DLMVTKGCLPDVVTYN 318
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L MQ I + T NI+I C +G + A+ +F ++ +G +PDV ++ T+I+GFC
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Query: 70 QMGQIRPALQLLRRAEDDELVQL 92
+ Q + L R+ ++D L+ L
Sbjct: 463 RKRQWDKSDLLYRKMQEDGLLPL 485
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L +M+ G P+ V N +ID C +G +N A +F + + G + D T+ +L+ G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G+ A +L+R D + + P+V+ ++
Sbjct: 219 LCCSGRWSDAARLMR---DMVMRDIVPNVITFT 248
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S + L +M + + P+ T N LI+ C G+++ A + + +G PDV T+
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLINGFC+ ++ +L R LV D + Y+
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLV---GDTITYN 353
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG +P+ VT N LI+ +C +++ +F + +RG D T+ T+I G+ Q G+
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
A ++ R + +P++ YS
Sbjct: 365 PDAAQEIFSRMDS------RPNIRTYS 385
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK Y VI L QMQ+ GI N T NIL++C+C Q++ A S + K G++P + T
Sbjct: 94 MKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVT 153
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
F +L+NGFC+ ++ AL + D++V + KP+VVIY+
Sbjct: 154 FGSLLNGFCRGDRVYDALYMF-----DQMVGMGYKPNVVIYN 190
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + L ++M+ GI P+ VT N LI C G+ + A + + + KR PDVFTF
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 62 ATLINGFCQMGQIRPA----LQLLRRAEDDELVQLKPDVVIYS 100
LI+ + G++ A +++RR+ L PD+V YS
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRS-------LDPDIVTYS 295
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +G++ N VT ILI YC G++N A +F + G P++ T+ L++G C G
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I AL +L D + + D+V Y+
Sbjct: 411 KIEKALVIL---ADMQKNGMDADIVTYN 435
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG P+ VT +ILI+ YC ++ +F + +RG + T+ LI G+C+ G+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A ++ RR + P+++ Y+
Sbjct: 377 LNVAEEIFRRM---VFCGVHPNIITYN 400
Score = 51.6 bits (122), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
MQ G+ + VT NI+I C G++ A+ ++ ++ +G PD++T+ T++ G + G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 73 QIRPALQLLRRAEDDELV 90
R A L R+ ++D ++
Sbjct: 481 LRREADALFRKMKEDGIL 498
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M G+ PN +T N+L+ C G+I A + A ++K G D+ T+ +I G C+
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G++ A + L+ PD+ Y+
Sbjct: 445 GEVADAWDIYCSLNCQGLM---PDIWTYT 470
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G PN V N +ID C Q++ A + + K G PDV T+ +LI+G C G
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A +++ E+ PDV ++
Sbjct: 236 RWSDATRMVSCMTKREIY---PDVFTFN 260
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 80.9 bits (198), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K Y V+ M+L GI + T I+I+CYC ++ FAFSV K GY+PD TF
Sbjct: 84 KQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITF 143
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLK--PDVVIYS 100
+TL+NGFC G++ A+ L+ D +V++K PD+V S
Sbjct: 144 STLVNGFCLEGRVSEAVALV-----DRMVEMKQRPDLVTVS 179
Score = 58.5 bits (140), Expect = 9e-10, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++ KG++PN +T N L+ +C G++N A +F + RG P V T+ L++G
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 68 FCQMGQIRPALQLLRRAEDDEL 89
C G++ AL++ + + +
Sbjct: 465 LCDNGELNKALEIFEKMQKSRM 486
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG P+ VT +ILI+ YC +++ +F I +G P+ T+ TL+ GFCQ G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 74 IRPALQLLRRAEDDELVQ--LKPDVVIY 99
+ A +L + E+V + P VV Y
Sbjct: 436 LNAAKELFQ-----EMVSRGVPPSVVTY 458
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M +GI P+ +T N LID +C ++ A +F + +G +PD+ T++ LIN +C
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++ ++L R L+ P+ + Y+
Sbjct: 397 KAKRVDDGMRLFREISSKGLI---PNTITYN 424
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M+ + I + V +I+ID C G + A S+F + +G + DV T+++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G+ ++LR ++ PDVV +S
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNII---PDVVTFS 319
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 27 NILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRAED 86
NI+I C+ +++ A+S+F ++ +G +PDV T+ +I G C+ G + A L R+ ++
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 87 D 87
D
Sbjct: 554 D 554
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M + I+P+ VT + LID + G++ A ++ + RG PD T+ +LI+GFC+
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ A Q+ D +V +PD+V YS
Sbjct: 365 CLHEANQMF-----DLMVSKGCEPDIVTYS 389
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L +M P+ VT + LI+ C G+++ A + + + G+QPD T+ +
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 216
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+N C+ G AL L R+ E+ +K VV YS
Sbjct: 217 LNRLCKSGNSALALDLFRKMEER---NIKASVVQYS 249
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +G+ P+ VT IL+D C G++N A +F ++K + + +I+G C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A L D +KPDVV Y+
Sbjct: 502 NASKVDDAWSLFCSLSDK---GVKPDVVTYN 529
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 80.5 bits (197), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K Y VISL +M++ GI + T NI+I+C+C Q++ A S+ + K GY+PD T
Sbjct: 98 LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 157
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
+L+NGFC+ ++ A+ L+ D++V++ KPD+V Y+
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLV-----DKMVEIGYKPDIVAYN 194
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S +SL +M G P+ V N +ID C ++N AF F I ++G +P+V T+ L
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+NG C + A +LL D ++ P+V+ YS
Sbjct: 232 VNGLCNSSRWSDAARLL---SDMIKKKITPNVITYS 264
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM GI P+ T NIL+ C G++ A +F ++KR D+ T+ T+I G C+ G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A L L LKPD+V Y+
Sbjct: 450 KVEEAWSLFCSL---SLKGLKPDIVTYT 474
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M +G++ N VT N LI + G ++ A F+ + G PD++T+ L+ G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G++ AL + ED + ++ D+V Y+
Sbjct: 410 LCDNGELEKALVIF---EDMQKREMDLDIVTYT 439
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+++ KGI PN VT L++ C+ + + A + + + K+ P+V T++ L++ F + G
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274
Query: 73 QIRPALQLLRRAEDDELVQLK--PDVVIYS 100
++ A +L +E+V++ PD+V YS
Sbjct: 275 KVLEAKELF-----EEMVRMSIDPDIVTYS 299
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+S L M K I PN +T + L+D + G++ A +F + + PD+ T+++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 64 LINGFCQMGQIRPALQLL 81
LING C +I A Q+
Sbjct: 301 LINGLCLHDRIDEANQMF 318
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 78.2 bits (191), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK + VISL +MQ GI N T NILI+C+C QI+ A ++ + K GY+P + T
Sbjct: 23 MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 82
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
++L+NG+C +I A+ L+ D++V++ +PD + ++
Sbjct: 83 LSSLLNGYCHGKRISDAVALV-----DQMVEMGYRPDTITFT 119
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L +M +G PN VT ++++ C G I+ AF++ + + DV F T+
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+ C+ + AL L + E ++P+VV YS
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETK---GIRPNVVTYS 224
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+H ++L +M+ KGI PN VT + LI C C G+ + A + + + ++ P++ TF
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 258
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
LI+ F + G+ A +L D++++ + PD+ Y+
Sbjct: 259 NALIDAFVKEGKFVEAEKL-----HDDMIKRSIDPDIFTYN 294
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S L M K I PN VT N LID + G+ A + + KR PD+FT+
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 63 TLINGFCQMGQIRPALQLLR 82
+LINGFC ++ A Q+
Sbjct: 295 SLINGFCMHDRLDKAKQMFE 314
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G+ P+ +T +IL+D C+ G++ A VF ++K + D++ + T+I G C+ G
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ L L +KP+VV Y+
Sbjct: 445 KVDDGWDLFCSL---SLKGVKPNVVTYN 469
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M +G++ + VT LI H G + A VF + G PD+ T++ L++G
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G++ AL++ + E +K D+ IY+
Sbjct: 406 CNNGKLEKALEVFDYMQKSE---IKLDIYIYT 434
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK + VISL +MQ GI N T NILI+C+C QI+ A ++ + K GY+P + T
Sbjct: 98 MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
++L+NG+C +I A+ L+ D++V++ +PD + ++
Sbjct: 158 LSSLLNGYCHGKRISDAVALV-----DQMVEMGYRPDTITFT 194
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G+ PN +T N L+D C G++ A VF +++ +P ++T+ +I G C+ G
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ L L +KPDV+IY+
Sbjct: 520 KVEDGWDLFCSL---SLKGVKPDVIIYN 544
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+H ++L +M+ KG+ PN +T + LI C C+ + + A + + + +R P+V TF
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
LI+ F + G++ A +L DE+++ + PD+ YS
Sbjct: 334 NALIDAFVKEGKLVEAEKLY-----DEMIKRSIDPDIFTYS 369
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+ +S L M + I PN VT N LID + G++ A ++ + KR PD+FT+
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLK---PDVVIYS 100
++LINGFC ++ A + EL+ K P+VV Y+
Sbjct: 369 SSLINGFCMHDRLDEAKHMF------ELMISKDCFPNVVTYN 404
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
+Q + P T NI+I+ C G++ + +F ++ +G +PDV + T+I+GFC+ G
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 74 IRPALQLLRRAEDD 87
A L R+ +D
Sbjct: 556 KEEADALFRKMRED 569
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L +M +G PN VT ++++ C G I+ AF++ + + +V ++T+
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+ C+ AL L E+ ++P+V+ YS
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENK---GVRPNVITYS 299
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + VISL QMQ GI + T +I I+C+C Q++ A +V A + K GY+PD+ T
Sbjct: 96 MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
++L+NG+C +I A+ L+ D++V++ KPD ++
Sbjct: 156 LSSLLNGYCHSKRISDAVALV-----DQMVEMGYKPDTFTFT 192
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH ++L +M KGI P+ T + LI C C+ G+ + A + + + +R P+V TF
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ LI+ F + G++ A +L DE+++ + PD+ YS
Sbjct: 332 SALIDAFVKEGKLVEAEKLY-----DEMIKRSIDPDIFTYS 367
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G+ PN +T NIL+D C G++ A VF +++ +PD++T+ +I G C+ G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +L L + P+V+ Y+
Sbjct: 518 KVEDGWELFCNL---SLKGVSPNVIAYN 542
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L QM +G P+ VT +++ C G I+ A S+ + K + DV + T+
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+G C+ + AL L ++ ++PDV YS
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNK---GIRPDVFTYS 297
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
+Q + P+ T NI+I+ C G++ + +F + +G P+V + T+I+GFC+ G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 74 IRPALQLLRRAEDD 87
A LL++ ++D
Sbjct: 554 KEEADSLLKKMKED 567
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S L M + I PN VT + LID + G++ A ++ + KR PD+FT++
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLK---PDVVIYS 100
+LINGFC ++ A + EL+ K P+VV YS
Sbjct: 368 SLINGFCMHDRLDEAKHMF------ELMISKDCFPNVVTYS 402
Score = 52.4 bits (124), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+SL +M+ I + V N +ID C ++ A ++F + +G +PDVFT+++LI+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLK--PDVVIYS 100
C G+ A +LL ++++ K P+VV +S
Sbjct: 302 CLCNYGRWSDASRLL-----SDMIERKINPNVVTFS 332
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + VISL QMQ GI + T +I I+C+C Q++ A +V A + K GY+PD+ T
Sbjct: 96 MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
++L+NG+C +I A+ L+ D++V++ KPD ++
Sbjct: 156 LSSLLNGYCHSKRISDAVALV-----DQMVEMGYKPDTFTFT 192
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+H + L +M+ KGI PN VT N LI+C C+ G+ + A + + + ++ P+V TF
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
LI+ F + G++ A +L +E++Q + PD + Y+
Sbjct: 332 NALIDAFFKEGKLVEAEKL-----HEEMIQRSIDPDTITYN 367
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K S ++L QM G P+ T LI + + A ++ + +RG QPD+ T+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
T++NG C+ G I AL LL + E ++K +VVI++
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKM---EAARIKANVVIFN 262
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
++L ++M+ I N V N +ID C + A +F + +G +P+V T+ +LIN
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G+ A +LL + ++ P+VV ++
Sbjct: 302 CLCNYGRWSDASRLLSNMLEK---KINPNVVTFN 332
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S L M K I PN VT N LID + G++ A + + +R PD T+
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 63 TLINGFCQMGQIRPALQLLR 82
LINGFC ++ A Q+ +
Sbjct: 368 LLINGFCMHNRLDEAKQMFK 387
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M + I P+ +T N+LI+ +C +++ A +F + + P++ T+ TLINGFC
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 70 QMGQIRPALQLLRRAEDDELV 90
+ ++ ++L R LV
Sbjct: 410 KCKRVEDGVELFREMSQRGLV 430
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 11 SHQMQLKGIMPNFV-----TSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
S QM K ++ N V T +IL+ C G+++ A +F ++K + ++F + T+I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G C+ G++ A L + +KPDVV Y+
Sbjct: 511 EGMCKAGKVGEAWDLFCS------LSIKPDVVTYN 539
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + VISL QMQ GI N T +ILI+C+C Q++ A +V A + K GY+PD+ T
Sbjct: 94 MNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 153
Query: 61 FATLINGFCQMGQIRPALQLL 81
+L+NGFC +I A+ L+
Sbjct: 154 LNSLLNGFCHGNRISDAVSLV 174
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K+ + ++L +M KGI PN VT N LI C C+ G+ + A + + + +R P+V TF
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ LI+ F + G++ A +L DE+++ + PD+ YS
Sbjct: 330 SALIDAFVKEGKLVEAEKLY-----DEMIKRSIDPDIFTYS 365
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G++P+ +T +IL+D C+ G++ A VF +++ +PD++T+ +I G C+ G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ L L +KP+VV Y+
Sbjct: 516 KVEDGWDLFCSL---SLKGVKPNVVTYT 540
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 39/126 (30%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI---- 65
L+ M+L G P+ VT N L++ +CH +I+ A S+ + + GYQPD FTF TLI
Sbjct: 139 LAKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 66 -------------------------------NGFCQMGQIRPALQLLRRAEDDELVQLKP 94
NG C+ G I AL LL++ E +++P
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG---KIEP 254
Query: 95 DVVIYS 100
VVIY+
Sbjct: 255 GVVIYN 260
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
T + + +Q + P+ T NI+I+ C G++ + +F ++ +G +P+V T+ T+
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 65 INGFCQMGQIRPALQLLRRAEDD 87
++GFC+ G A L R +++
Sbjct: 543 MSGFCRKGLKEEADALFREMKEE 565
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S L M + I PN VT + LID + G++ A ++ + KR PD+FT++
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLK---PDVVIYS 100
+LINGFC ++ A + EL+ K P+VV Y+
Sbjct: 366 SLINGFCMHDRLDEAKHMF------ELMISKDCFPNVVTYN 400
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+SL +M+ I P V N +ID C+ +N A ++F + +G +P+V T+ +LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G+ A +LL D ++ P+VV +S
Sbjct: 300 CLCNYGRWSDASRLL---SDMIERKINPNVVTFS 330
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 75.5 bits (184), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK + VIS +M++ G+ N T NI+I+C C Q++FA ++ + K GY P + T
Sbjct: 78 MKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVT 137
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
+L+NGFC +I A+ L+ D++V++ +PD V ++
Sbjct: 138 LNSLLNGFCHGNRISEAVALV-----DQMVEMGYQPDTVTFT 174
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G+ PN +T N L+D C G++ A VF ++K +PD++T+ + G C+ G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ L L +KPDV+ Y+
Sbjct: 500 KVEDGWDLFCSL---SLKGVKPDVIAYN 524
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+H ++L +M KGI P+ T + LI C C+ G+ + A + + + +R P+V TF
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+LI+ F + G++ A +L DE++Q + P++V Y+
Sbjct: 314 NSLIDAFAKEGKLIEAEKLF-----DEMIQRSIDPNIVTYN 349
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M + I PN VT N LI+ +C +++ A +F + + PDV T+ TLINGFC
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 70 QMGQIRPALQLLR 82
+ ++ ++L R
Sbjct: 392 KAKKVVDGMELFR 404
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L QM G P+ VT L+ + + A ++ + +G QPD+ T+ +
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
ING C+ G+ AL LL + E +++ DVVIYS
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKG---KIEADVVIYS 244
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S L M + I PN VT N LID + G++ A +F + +R P++ T+
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+LINGFC ++ A Q+ + + PDVV Y+
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCL---PDVVTYN 384
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
+Q + P+ T NI+ + C G++ + +F ++ +G +PDV + T+I+GFC+ G
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 74 IRPALQLLRRAEDD 87
A L + ++D
Sbjct: 536 KEEAYTLFIKMKED 549
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
++L ++M+ I + V + +ID C ++ A ++F + +G +PDVFT+++LI+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G+ A +LL D ++ P+VV ++
Sbjct: 284 CLCNYGRWSDASRLL---SDMLERKINPNVVTFN 314
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK + VI+L +Q+ G+ + T N+L++C+C Q A S + K G++PD+ T
Sbjct: 85 MKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVT 144
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
F +LINGFC ++ A+ ++ + + + +KPDVV+Y+
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVE---MGIKPDVVMYT 181
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+S+ +QM GI P+ V +ID C G +N+A S+F + G +PDV + +L+N
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G C G+ R A LLR ++KPDV+ ++
Sbjct: 221 GLCNSGRWRDADSLLRGMTKR---KIKPDVITFN 251
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + + ++M KG+ N +T LI + +G+ N A VF+ + RG P++ T+
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ C G+++ AL + + E+ + P++ Y+
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL M + I P+ +T N LID + G+ A ++ + + P++FT+ +LINGF
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G + A Q+ E PDVV Y+
Sbjct: 293 CMEGCVDEARQMFYLMETKGCF---PDVVAYT 321
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H + +SL QM+ GI P+ V L++ C+ G+ A S+ + KR +PDV TF
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLK--PDVVIYS 100
LI+ F + G+ A +L +E++++ P++ Y+
Sbjct: 252 ALIDAFVKEGKFLDAEELY-----NEMIRMSIAPNIFTYT 286
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L ++M I PN T LI+ +C G ++ A +F + +G PDV + +LINGF
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 69 CQMGQIRPALQL 80
C+ ++ A+++
Sbjct: 328 CKCKKVDDAMKI 339
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+ ++ G+ PN T N+L+ C+ G++ A VF +RKR + T+ +I G C+
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+++ A+ L +KP+VV Y+
Sbjct: 474 GKVKNAVNLFCSLPSK---GVKPNVVTYT 499
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 74.3 bits (181), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K ++ V+ Q++L GI N T NI+I+C+C + FA+SV + K GY+PD TF
Sbjct: 102 KQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 161
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI G G++ A+ L+ R ++ +PDVV Y+
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVEN---GCQPDVVTYN 197
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G++ N VT +IL+ +C G+I A +F + G PDV T+ L++G C G++
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
AL++ ED + ++ +V+Y+
Sbjct: 457 ALEIF---EDLQKSKMDLGIVMYT 477
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +GI PN +T N L+D YC +++ A ++ + + PD+ TF +LI G+C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++ +++ R LV + V YS
Sbjct: 380 MVKRVDDGMKVFRNISKRGLV---ANAVTYS 407
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P+ VT LI YC + +++ VF I KRG + T++ L+ GFCQ G+I+ A +L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 81 LRRAEDDELVQ--LKPDVVIY 99
+ E+V + PDV+ Y
Sbjct: 426 FQ-----EMVSHGVLPDVMTY 441
Score = 52.4 bits (124), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M G P+ VT N +++ C G + A + + +R + DVFT++T+
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+ C+ G I A+ L + E +K VV Y+
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETK---GIKSSVVTYN 267
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + I+PN +T N+L+D + G++ A ++ + RG P++ T+ TL++G+C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 70 QMGQIRPALQLLRRAEDDELVQLK--PDVVIYS 100
++ A +L D +V+ K PD+V ++
Sbjct: 345 MQNRLSEANNML-----DLMVRNKCSPDIVTFT 372
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M+ + + + T + +ID C G I+ A S+F + +G + V T+ +L
Sbjct: 210 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G C+ G+ LL+ E+V P+V+ ++
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIV---PNVITFN 302
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 24 VTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRR 83
V +I+ C G++ A+++F ++ +G +P+V T+ +I+G C+ G + A LLR+
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 84 AEDD 87
E+D
Sbjct: 534 MEED 537
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 74.3 bits (181), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K Y V++L QM+ KGI + T +I+I+C+C ++++AFS I K GY+PD F
Sbjct: 102 KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIF 161
Query: 62 ATLINGFCQMGQIRPALQLLRR 83
TL+NG C ++ AL+L+ R
Sbjct: 162 NTLLNGLCLECRVSEALELVDR 183
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M L+G++ N VT N L+ +C G++ A +F + R +PD+ ++ L++G
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
C G++ AL++ + E +++ D+ IY
Sbjct: 483 LCDNGELEKALEIFGKIEKS---KMELDIGIY 511
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +GI PN +T N LID +C ++ A + + +G PD+ TF LING+C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 70 QMGQIRPALQLLR 82
+ +I L+L R
Sbjct: 415 KANRIDDGLELFR 427
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I + M KG P+ +T NILI+ YC +I+ +F + RG + T+ TL+ G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 68 FCQMGQIRPALQLLRRAEDDELV--QLKPDVVIY 99
FCQ G++ A +L + E+V +++PD+V Y
Sbjct: 448 FCQSGKLEVAKKLFQ-----EMVSRRVRPDIVSY 476
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M+ + I + V +I+ID C G ++ AF++F + +G++ D+ T+ TLI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC G+ +LLR D ++ P+VV +S
Sbjct: 308 FCNAGRWDDGAKLLR---DMIKRKISPNVVTFS 337
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L ++M++KG + +T N LI +C+ G+ + + + KR P+V TF+ LI+ F
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 69 CQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ G++R A QLL+ E++Q + P+ + Y+
Sbjct: 344 VKEGKLREADQLLK-----EMMQRGIAPNTITYN 372
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L +M G P +T N L++ C G+++ A + + + G+QP+ T+ +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+N C+ GQ A++LLR+ E+ +K D V YS
Sbjct: 235 LNVMCKSGQTALAMELLRKMEER---NIKLDAVKYS 267
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M + I PN VT ++LID + G++ A + + +RG P+ T+ +LI+GFC
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 70 QMGQIRPALQLL 81
+ ++ A+Q++
Sbjct: 380 KENRLEEAIQMV 391
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK + VISL +MQ I+ T NILI+C+C QI+ A ++ + K GY+P + T
Sbjct: 98 MKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
++L+NG+C +I A+ L+ D++V++ +PD + ++
Sbjct: 158 LSSLLNGYCHGKRISDAVALV-----DQMVEMGYRPDTITFT 194
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S L M K I PN VT N LID + G+ A ++ + KR PD+FT+
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+L+NGFC ++ A Q+ + PDVV Y+
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCF---PDVVTYN 404
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+H ++L +M+ KGI PN VT + LI C C G+ + A + + + ++ P++ TF
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
LI+ F + G+ A +L D++++ + PD+ Y+
Sbjct: 334 NALIDAFVKEGKFVEAEKLY-----DDMIKRSIDPDIFTYN 369
Score = 53.5 bits (127), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G+ P+ +T +IL+D C+ G++ A VF ++K + D++ + T+I G C+ G
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ L L +KP+VV Y+
Sbjct: 520 KVDDGWDLFCSL---SLKGVKPNVVTYN 544
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K S ++L QM G P+ +T LI + + A ++ + +RG QP++ T+
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++NG C+ G AL LL + E +++ DVVI++
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKM---EAAKIEADVVIFN 264
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M +G++ + VT LI H G + A VF + G PD+ T++ L++G
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G++ AL++ + E +K D+ IY+
Sbjct: 481 CNNGKLEKALEVFDYMQKSE---IKLDIYIYT 509
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 71.6 bits (174), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 11/104 (10%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
++ Y TVI S +M+L GI + + ILI C+C +++FA SV + K GY+P + T
Sbjct: 84 LRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVT 143
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLK----PDVVIYS 100
F +L++GFC + +I A L+ ++ +K P+VV+Y+
Sbjct: 144 FGSLLHGFCLVNRIGDAFSLV-------ILMVKSGYEPNVVVYN 180
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG PN VT N LI +C ++ +F + G+ D+FT+ TLI+G+CQ+G+
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 74 IRPALQL 80
+R AL +
Sbjct: 367 LRVALDI 373
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL M G PN V N LID C G++N A + + K+G DV T+ TL+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G+ A ++LR D + PDVV ++
Sbjct: 222 CYSGRWSDAARMLR---DMMKRSINPDVVTFT 250
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M +G + T N LI YC +G++ A +F + R PD+ T L++G
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 68 FCQMGQIRPAL 78
C G+I AL
Sbjct: 396 LCVNGEIESAL 406
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ L ++M+ KG+ + VT N L+ C+ G+ + A + + KR PDV TF LI+
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
F + G + A +L + E++Q + P+ V Y+
Sbjct: 255 VFVKQGNLDEAQELYK-----EMIQSSVDPNNVTYN 285
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M + PN VT N +I+ C G++ A F + +G P+V T+ TLI+GF
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 69 CQMGQIRPALQLLRR 83
C+ + ++L +R
Sbjct: 327 CKFRMVDEGMKLFQR 341
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+ Y VISL +++ GI + + LIDC+C +++ A S + K G++P + T
Sbjct: 92 LNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVT 151
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
F +L+NGFC + + A+ L+ D++V L +P+VVIY+
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLV-----DQIVGLGYEPNVVIYN 188
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG PN VT N LI+ YC +++ + + + G D FT+ TL G+CQ G+
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA 377
Query: 77 ALQLLRR 83
A ++L R
Sbjct: 378 AEKVLGR 384
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+SL Q+ G PN V N +ID C GQ+N A V ++K G +PDV T+ +LI
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G + ++L D + + PDV+ +S
Sbjct: 229 LFHSGTWGVSARIL---SDMMRMGISPDVITFS 258
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M + + PN VT N LI+ C G ++ A V + +G+ P+ T+ TLING+C+
Sbjct: 278 NEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337
Query: 72 GQIRPALQLL 81
++ +++L
Sbjct: 338 KRVDDGMKIL 347
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+T + + M+ GI P+ VT N LI H G + + + + + G PDV TF+ L
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
I+ + + GQ+ A + + +E++Q + P++V Y+
Sbjct: 261 IDVYGKEGQLLEA-----KKQYNEMIQRSVNPNIVTYN 293
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+T + +M +GI PN VT ILI C G+I AF ++ I KRG +P + T+++L
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+GFC+ G +R L ED + PDVVIY
Sbjct: 433 IDGFCKCGNLRSGFALY---EDMIKMGYPPDVVIYG 465
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG PN VT L+D + I +F +F ++++G P + +++ +I+G C+ G+
Sbjct: 668 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 727
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A + +A D +L+ PDVV Y+
Sbjct: 728 VDEATNIFHQAIDAKLL---PDVVAYA 751
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G PN VT LI+ +C G+++ AF +F + +RG +PD+ ++TLI+G+ + G +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+L +A +K DVV++S
Sbjct: 341 HKLFSQALHK---GVKLDVVVFS 360
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +MQ KGI P+ V+ +I+ID C G+++ A ++F PDV +A LI G+C
Sbjct: 699 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 758
Query: 70 QMGQIRPAL----QLLRRA-EDDELVQ 91
++G++ A +LR + D+L+Q
Sbjct: 759 KVGRLVEAALLYEHMLRNGVKPDDLLQ 785
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
Q+ +G+ P+ VT + LID +C G + F+++ + K GY PDV + L++G + G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 73 QIRPALQ 79
+ A++
Sbjct: 476 LMLHAMR 482
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+T + +M +GI PN VT ILI C G+I AF ++ I KRG +P + T+++L
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+GFC+ G +R L ED + PDVVIY
Sbjct: 433 IDGFCKCGNLRSGFALY---EDMIKMGYPPDVVIYG 465
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG PN VT L+D + I +F +F ++++G P + +++ +I+G C+ G+
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 756
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A + +A D +L+ PDVV Y+
Sbjct: 757 VDEATNIFHQAIDAKLL---PDVVAYA 780
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G PN VT LI+ +C G+++ AF +F + +RG +PD+ ++TLI+G+ + G +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+L +A +K DVV++S
Sbjct: 341 HKLFSQALHK---GVKLDVVVFS 360
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +MQ KGI P+ V+ +I+ID C G+++ A ++F PDV +A LI G+C
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 787
Query: 70 QMGQIRPAL----QLLRRA-EDDELVQ 91
++G++ A +LR + D+L+Q
Sbjct: 788 KVGRLVEAALLYEHMLRNGVKPDDLLQ 814
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
Q+ +G+ P+ VT + LID +C G + F+++ + K GY PDV + L++G + G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 73 QIRPALQ 79
+ A++
Sbjct: 476 LMLHAMR 482
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + VISL QMQ GI N T +ILI+C+C Q+ A +V + K GY+P++ T
Sbjct: 94 MNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVT 153
Query: 61 FATLINGFCQMGQIRPALQLL 81
++L+NG+C +I A+ L+
Sbjct: 154 LSSLLNGYCHSKRISEAVALV 174
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH ++L +M+ KGI PN VT + LI C C+ G+ + A + + + +R PDVFTF
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ LI+ F + G++ A +L DE+V+ + P +V YS
Sbjct: 330 SALIDAFVKEGKLVEAEKLY-----DEMVKRSIDPSIVTYS 365
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L +M KG P+ VT ++++ C G + AF++ + + +P V + T+
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+G C+ + AL L + E ++P+VV YS
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETK---GIRPNVVTYS 295
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G+ PN +T N L+D C G++ A VF +++ +P ++T+ +I G C+ G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ L L +KPDVV Y+
Sbjct: 516 KVEDGWDLFCNL---SLKGVKPDVVAYN 540
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
+Q + P T NI+I+ C G++ + +F + +G +PDV + T+I+GFC+ G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 74 IRPALQLLRRAEDD 87
A L + ++D
Sbjct: 552 KEEADALFKEMKED 565
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M +G++ N VT NILI G + A +F + G P++ T+ TL++G C+
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 72 GQIRPAL---QLLRRAEDDELVQLKPDVVIYS 100
G++ A+ + L+R+ +++P + Y+
Sbjct: 480 GKLEKAMVVFEYLQRS------KMEPTIYTYN 505
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 69.7 bits (169), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + VISL QMQ GI N T +I I+ +C Q++ A ++ + K GY P + T
Sbjct: 88 MNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVT 147
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
+L+NGFC +I A+ L+ D++V++ +PD V ++
Sbjct: 148 LNSLLNGFCHGNRISEAVALV-----DQMVEMGYQPDTVTFT 184
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH L ++M+ KGI P+ T N LI C C+ G+ + A + + + ++ PD+ F
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLK---PDVVIYS 100
LI+ F + G++ A +L DE+V+ K PDVV Y+
Sbjct: 324 NALIDAFVKEGKLVEAEKLY-----DEMVKSKHCFPDVVAYN 360
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G+ P+ +T NIL+D C+ G + A VF ++KR + D+ T+ T+I C+ G
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ L L +KP+VV Y+
Sbjct: 476 KVEDGWDLFCSL---SLKGVKPNVVTYT 500
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S +++ +M G P+ VT N L++ +CH +I+ A ++ + + GYQPD TF TL
Sbjct: 127 SLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 186
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
++G Q + A+ L+ R + +PD+V Y
Sbjct: 187 VHGLFQHNKASEAVALVERM---VVKGCQPDLVTY 218
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L +M +KG P+ VT +I+ C G+ + A ++ + K + DV + T+
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+G C+ + A L + E +KPDV Y+
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETK---GIKPDVFTYN 289
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L QM G P+ VT L+ + + A ++ + +G QPD+ T+ +
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
ING C+ G+ AL LL + E +++ DVVIY+
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKG---KIEADVVIYN 254
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
++L ++M+ I + V N +ID C ++ AF +F + +G +PDVFT+ LI+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C G+ A +LL + + PD+V ++
Sbjct: 295 LCNYGRWSDASRLLSDMLEK---NINPDLVFFN 324
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
T + + MQ + + + VT +I+ C G++ + +F ++ +G +P+V T+ T++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPD 95
+GFC+ G L+ D V++K D
Sbjct: 504 SGFCRKG--------LKEEADALFVEMKED 525
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + VIS +M++ GI N T NILI+C+C +++ A ++ + K GY+PD+ T
Sbjct: 91 MNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVT 150
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
+L+NGFC +I A+ L+ D++V++ KPD V ++
Sbjct: 151 LNSLLNGFCHGNRISDAVALV-----DQMVEMGYKPDTVTFT 187
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S L M + I PN VT + LID + G++ A ++ + KR P++FT++
Sbjct: 303 RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYS 362
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLK---PDVVIYS 100
+LINGFC + ++ A Q+L EL+ K P+VV Y+
Sbjct: 363 SLINGFCMLDRLGEAKQML------ELMIRKDCLPNVVTYN 397
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+H ++L +M+ KG+ PN +T + LI C C+ G+ + A + + + +R P++ TF
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ LI+ F + G++ A +L +E+++ + P++ YS
Sbjct: 327 SALIDAFVKKGKLVKAEKLY-----EEMIKRSIDPNIFTYS 362
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM G+ PN +T NIL+D C G++ A VF +++ +PD++T+ +I G C+ G
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Query: 73 QIR 75
+ +
Sbjct: 513 KWK 515
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L QM G P+ VT LI + + A ++ + +RG QPD+ T+ +
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+NG C+ G AL LL + E +++ +VVIYS
Sbjct: 225 VNGLCKRGDTDLALNLLNKM---EAAKIEANVVIYS 257
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G P+ VT N L++ +CH +I+ A ++ + + GY+PD TF TLI+G
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ A+ L+ D +VQ +PD+V Y
Sbjct: 198 KASEAVALI-----DRMVQRGCQPDLVTYG 222
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M + I PN T + LI+ +C L ++ A + + ++ P+V T+ TLINGFC
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 70 QMGQIRPALQLLRRAEDDELV 90
+ ++ ++L R LV
Sbjct: 405 KAKRVDKGMELFREMSQRGLV 425
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M Y VISL QMQ+ GI P T NI++ C C Q A + K G++PD+ T
Sbjct: 96 MNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVT 155
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
F +L+NG+C +I A+ L D+++ + KP+VV Y+
Sbjct: 156 FTSLLNGYCHWNRIEDAIALF-----DQILGMGFKPNVVTYT 192
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 22 NFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLL 81
N VT I+I C LG++ AF +F ++ +G +P+V T+ T+I+GFC+ G I A L
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Query: 82 RRAEDDELVQLKPDVVIYS 100
++ ++D + P+ +Y
Sbjct: 492 KKMKEDGFL---PNESVYK 507
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I+L Q+ G PN VT LI C C +N A +F + G +P+V T+ L+
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G C++G+ A LLR D +++P+V+ ++
Sbjct: 232 GLCEIGRWGDAAWLLR---DMMKRRIEPNVITFT 262
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+H + + L +QM G PN VT N L+ C +G+ A + + KR +P+V TF
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLK--PDVVIYS 100
LI+ F ++G++ A +L + ++Q+ PDV Y
Sbjct: 262 TALIDAFVKVGKLMEAKELY-----NVMIQMSVYPDVFTYG 297
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M KG++ N +T +LI YC +G+ + A VF + R PD+ T+ L++G C
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 72 GQIRPAL---QLLRRAEDD 87
G++ AL + +R+ E D
Sbjct: 412 GKVEKALMIFEYMRKREMD 430
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ L M + I PN +T LID + +G++ A ++ + + PDVFT+ +
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LING C G + A Q+ E + P+ VIY+
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCY---PNEVIYT 332
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+QM + P+ T N+L+D C G++ A +F +RKR ++ T+ +I G C++
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G++ A L +KP+V+ Y+
Sbjct: 447 GKVEDAFDLFCSLFSK---GMKPNVITYT 472
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 67.8 bits (164), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M ISL +M+++ I N + NILI C+C +++F+ S F + K G+QPDV T
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVT 178
Query: 61 FATLINGFCQMGQIRPALQLL 81
F TL++G C +I AL L
Sbjct: 179 FNTLLHGLCLEDRISEALALF 199
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
++L QM G+ P +T N LI+ C G++ A ++ + +G DV T+ T++NG
Sbjct: 211 VALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 270
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+MG + AL LL + E+ +KPDVVIYS
Sbjct: 271 MCKMGDTKSALNLLSKMEE---THIKPDVVIYS 300
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + ++L +M+ I P+ V + +ID C G + A +F+ + ++G P+VFT
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +I+GFC G+ A +LLR + E + PDV+ ++
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIERE---INPDVLTFN 370
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H+S L +M KGI PN T N +ID +C G+ + A + + +R PDV TF
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
LI+ + G++ A +L DE++ + PD V Y+
Sbjct: 371 ALISASVKEGKLFEAEKLC-----DEMLHRCIFPDTVTYN 405
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P+ VT N +ID YC +++ + I +RG + T+ TLI+GFC++ + A L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 81 LR 82
+
Sbjct: 490 FQ 491
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++ +G++ N T N LI +C + +N A +F + G PD T L+ G
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC+ ++ AL+L E ++ ++ D V Y+
Sbjct: 512 FCENEKLEEALELF---EVIQMSKIDLDTVAYN 541
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
++L QM G+ P +T N LI+ C G++ A ++ + +G DV T+ T++N
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G C+MG + AL LL + E+ +KPDVVIYS
Sbjct: 270 GMCKMGDTKSALNLLSKMEE---THIKPDVVIYS 300
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M ISL +M+++ I N + NILI C+C +++F+ S F + K G+QPDV T
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVT 178
Query: 61 FATLINGFCQMGQIRPALQL 80
F TL++G C +I AL L
Sbjct: 179 FNTLLHGLCLEDRISEALAL 198
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + ++L +M+ I P+ V + +ID C G + A +F+ + ++G P+VFT
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +I+GFC G+ A +LLR + E + PDV+ ++
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIERE---INPDVLTFN 370
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H+S L +M KGI PN T N +ID +C G+ + A + + +R PDV TF
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
LI+ + G++ A +L DE++ + PD V Y+
Sbjct: 371 ALISASVKEGKLFEAEKLC-----DEMLHRCIFPDTVTYN 405
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P+ VT N +ID YC +++ + I +RG + T+ TLI+GFC++ + A L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 81 LRR 83
+
Sbjct: 490 FQE 492
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + L ++ +G++ N T N LI +C + +N A +F + G PD T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L+ GFC+ ++ AL+L E ++ ++ D V Y+
Sbjct: 506 NILLYGFCENEKLEEALELF---EVIQMSKIDLDTVAYN 541
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + VISL +MQ I + + NILI+C+C Q+ A +V + K GY+PD+ T
Sbjct: 93 MNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 152
Query: 61 FATLINGFCQMGQIRPALQLL 81
++L+NG+C +I A+ L+
Sbjct: 153 LSSLLNGYCHGKRISEAVALV 173
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K S ++L QM + PN VT N LI + + A ++ + RG QPD+FT+
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
T++NG C+ G I AL LL++ E +++ DVVIY+
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKG---KIEADVVIYT 259
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K+ + ++L +M KGI PN VT N LI C C+ G+ + A + + + +R P+V TF
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ LI+ F + G++ A +L DE+++ + PD+ YS
Sbjct: 329 SALIDAFVKEGKLVEAEKLY-----DEMIKRSIDPDIFTYS 364
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M G+ P+ +T +IL+D C G++ A VF ++K +PD++T+ +I G C+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G++ L L +KP+V+IY+
Sbjct: 514 GKVEDGWDLFCSL---SLKGVKPNVIIYT 539
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
+Q + P+ T NI+I+ C G++ + +F ++ +G +P+V + T+I+GFC+ G
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Query: 74 IRPALQLLRRAEDD 87
A L R ++D
Sbjct: 551 KEEADALFREMKED 564
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+S L M + I PN VT + LID + G++ A ++ + KR PD+FT++
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLK---PDVVIYS 100
+LINGFC ++ A + EL+ K P+VV Y+
Sbjct: 365 SLINGFCMHDRLDEAKHMF------ELMISKDCFPNVVTYN 399
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + L +M +G++ N VT N LI G + A +F + G PD+ T+
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ L++G C+ G++ AL + + +++PD+ Y+
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKS---KMEPDIYTYN 504
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
K PN VT N LI +C ++ +F + +RG + T+ TLI G Q G
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A ++ ++ D + PD++ YS
Sbjct: 449 AQKIFKKMVSD---GVPPDIITYS 469
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ G++PN VT N L+ YC LG + AF + +++ PD+ T+ LING C G
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+R L+L+ + ++L+PDVV Y+
Sbjct: 326 MREGLELMDAMKS---LKLQPDVVTYN 349
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ ++P+ T NILI+ C+ G + + ++ QPDV T+ TLI+G ++G
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 74 IRPALQLLRRAEDD 87
A +L+ + E+D
Sbjct: 361 SLEARKLMEQMEND 374
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + + +M KGI N +T N ++D C +++ A ++ + KRG+ D T+ TL
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 65 INGFCQMGQIRPALQLLRRAEDDEL--VQLKPDVVIYS 100
I GF + ++ AL++ DE+ V++ P V ++
Sbjct: 493 IMGFFREEKVEKALEMW-----DEMKKVKITPTVSTFN 525
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM+ GI PN +T N LID +C +G++ A S+ ++ RG P + T+ L++GFC+ G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
A ++++ E+ +KP V Y+
Sbjct: 388 DTSGAAKMVKEMEER---GIKPSKVTYT 412
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L M+ G++P+ T ++LI +C GQ+N A +F ++ ++ +P+ + T+I G
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
+C+ G AL+LL+ E+ EL P+V Y
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELA---PNVASY 516
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ +G+ N VT N LI C ++N A V ++ G P++ T+ TLI+GFC +G
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ AL L R D + L P +V Y+
Sbjct: 353 KLGKALSLCR---DLKSRGLSPSLVTYN 377
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
+ +MQ G+ PN T N +++ C G+ AF VF +R+RG ++ T+ TLI G C
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++ A +++ + + D + P+++ Y+
Sbjct: 315 REMKLNEANKVVDQMKSD---GINPNLITYN 342
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+SL ++ +G+ P+ VT NIL+ +C G + A + + +RG +P T+ LI+
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
F + + A+QL E+ LV PDV YS
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLV---PDVHTYS 447
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + +M+ +GI P+ VT ILID + + A + ++ + G PDV T++ L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+GFC GQ+ A +L + + +P+ VIY+
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEK---NCEPNEVIYN 482
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM+++G+ PN T L+D + G +N A+ V + G+ P V T+ LING C G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A+ +L ED + L PDVV YS
Sbjct: 430 KMEDAIAVL---EDMKEKGLSPDVVSYS 454
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G P+ VT N LI+ +C G++ A +V ++++G PDV +++T+++GFC+
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ AL++ R E+V+ +KPD + YS
Sbjct: 465 DVDEALRVKR-----EMVEKGIKPDTITYS 489
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 45/69 (65%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
++L +M+ KG +PN VT N LID YC L +I+ F + ++ +G +P++ ++ +IN
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 67 GFCQMGQIR 75
G C+ G+++
Sbjct: 284 GLCREGRMK 292
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M + PN T NILI +C G I+ A ++F + +G P+V T+ TLI+G+C++
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I +LLR L L+P+++ Y+
Sbjct: 255 KIDDGFKLLRSM---ALKGLEPNLISYN 279
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M LKG+ PN ++ N++I+ C G++ V + +RGY D T+ TLI G+C
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 70 QMGQIRPAL----QLLRRAEDDELVQLKPDVVIYS 100
+ G AL ++LR L P V+ Y+
Sbjct: 322 KEGNFHQALVMHAEMLRHG-------LTPSVITYT 349
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 20/112 (17%)
Query: 4 YSTVIS-------------LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIR 50
YSTV+S + +M KGI P+ +T + LI +C + A ++ +
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 51 KRGYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ G PD FT+ LIN +C G + ALQL +E+V+ + PDVV YS
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQL-----HNEMVEKGVLPDVVTYS 559
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G+ P+ +T LI C G +N A +R RG P+ T+ TL++GF Q G
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A ++LR D+ P VV Y+
Sbjct: 395 YMNEAYRVLREMNDN---GFSPSVVTYN 419
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQ-INFAFSVFATIRKRGYQPDVFTFATLI 65
+S+ H Q G MP ++ N ++D + I+FA +VF + + P+VFT+ LI
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILI 212
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GFC G I AL L + E + P+VV Y+
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCL---PNVVTYN 244
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I++ M+ KG+ P+ V+ + ++ +C ++ A V + ++G +PD T+++LI
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GFC+ + + A L E+ V L PD Y+
Sbjct: 494 GFCEQRRTKEACDLY---EEMLRVGLPPDEFTYT 524
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
MK S V++ +M +G + VT N LI YC G + A + A + + G P V T
Sbjct: 291 MKEVSFVLT---EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 61 FATLINGFCQMGQIRPALQLL 81
+ +LI+ C+ G + A++ L
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFL 368
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M G+ P+ T LI+ YC G + A + + ++G PDV T++ LING
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
+ + R A +LL + +E V P V Y
Sbjct: 567 KQSRTREAKRLLLKLFYEESV---PSDVTY 593
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 62.8 bits (151), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
++ V +M+ +G P+ VT N L+ YC G++ AF ++ + +R PD+ T+
Sbjct: 251 NFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYT 310
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+LI G C+ G++R A Q R D +KPD + Y+
Sbjct: 311 SLIKGLCKDGRVREAHQTFHRMVDR---GIKPDCMSYN 345
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
GI PN T NIL + +C+ + + G++PD+ T+ TL++ +C+ G+++ A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
L + +V PD+V Y+
Sbjct: 291 FYLYKIMYRRRVV---PDLVTYT 310
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 62.8 bits (151), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G P +T N LI +C LGQ+ A +F + +RG +P+V+T+ LI+G C +G+ +
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 77 ALQLLR-RAEDDELVQLKPDVVIYS 100
ALQLL E DE +P+ V Y+
Sbjct: 336 ALQLLNLMIEKDE----EPNAVTYN 356
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+++ S +M NFV+ + L++CY + + FAF V A + KRG+ +V+
Sbjct: 86 RNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNH 145
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L+ G C+ + A+ LLR + L+ PDV Y+
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLM---PDVFSYN 181
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ G+ + V LI +C G+++ ++F + +RG P T+ TLI GFC++G
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 73 QIRPALQLL 81
Q++ A ++
Sbjct: 297 QLKEASEIF 305
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +MQ P+ V+ NI+ID G I A S+ + + G PD+FT++ LIN F
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVI 98
++G + A+ + D +PD I
Sbjct: 611 KLGYLDEAISFFDKMVDS---GFEPDAHI 636
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + L+++M+ G + VT ILID +C G+++ A ++ G + D+ +
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 62 ATLINGFCQMGQI 74
+LI GFC G++
Sbjct: 251 TSLIRGFCDCGEL 263
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
PN VT NI+I+ C G + A + ++KR +PD T+ L+ G C G + A +L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 81 LRRAEDDELVQLKPDVVIYS 100
L D PDV+ Y+
Sbjct: 410 LYLMLKDS-SYTDPDVISYN 428
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 62.4 bits (150), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
I P+ +T N LI+ YC G++ AF + + KR +P+V TF L+ G C++G+ A+
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 79 QLLRRAEDDELVQLKPDVVIYS 100
LL+R D+ L PD+V Y+
Sbjct: 427 HLLKRMLDN---GLSPDIVSYN 445
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L QM KG P+ T +LI C G I+ AF++F + RG +P+V T+ LI+G C
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G+I A + R+ D + P V+ Y+
Sbjct: 348 RDGKIEEANGVCRKMVKDRIF---PSVITYN 375
Score = 52.8 bits (125), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M G+ P+ V+ N+LID C G +N A+ + +++ +PD TF +IN
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 68 FCQMGQ 73
FC+ G+
Sbjct: 486 FCKQGK 491
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M +G PN T +LID C G+I A V + K P V T+ LING+
Sbjct: 322 NLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY 381
Query: 69 CQMGQIRPALQLLRRAE 85
C+ G++ PA +LL E
Sbjct: 382 CKDGRVVPAFELLTVME 398
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++P+ VT L+D G I +F + ++ G P+V+ + +ING CQ G++ A
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+LL +D + P+ V Y+
Sbjct: 636 EKLLSAMQDS---GVSPNHVTYT 655
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H +T L M I P+ +T +I+ +C G+ + A + + ++G D T
Sbjct: 456 HMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGT 515
Query: 63 TLINGFCQMGQIRPALQLL 81
TLI+G C++G+ R AL +L
Sbjct: 516 TLIDGVCKVGKTRDALFIL 534
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 62.4 bits (150), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG +PN V N +I YC LG I A+ VF ++ +G+ P + TF T+INGFC+ G
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 77 ALQLLRRAEDDEL 89
+ +LL ++ L
Sbjct: 294 SDRLLSEVKERGL 306
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M + ++P+ T + +ID Y + A +F + K +P+V T+ +LINGFC
Sbjct: 544 NRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQ 603
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G + A + + + +LV P+VV Y+
Sbjct: 604 GDFKMAEETFKEMQLRDLV---PNVVTYT 629
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V SLS + KG+ + V N +I +C G ++ A + + + PD FT++T+I+
Sbjct: 507 VFSLSVE---KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+ + + A+++ R E + + KP+VV Y+
Sbjct: 564 GYVKQQDMATAIKIFRYMEKN---KCKPNVVTYT 594
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K Y L QM +G P+ VT ILI G ++ A ++ + RG PD +
Sbjct: 394 KEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIY 453
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++G C+ G+ PA L D ++ PD +Y+
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNIL---PDAYVYA 489
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M G+ PN V N LI +C +I A +F + ++G +PDV+TF +LI+G C++
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 72 GQIRPALQLLR 82
+I+ AL LLR
Sbjct: 508 DEIKHALWLLR 518
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
LS + GI+P+ T N LI Y G + A V +R +G +P+V+++ L++GFC
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++G+I A +L D LKP+ V ++
Sbjct: 436 KLGKIDEAYNVLNEMSAD---GLKPNTVGFN 463
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
H M+ KG PN + IL+D +C LG+I+ A++V + G +P+ F LI+ FC+
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I A+++ R KPDV ++
Sbjct: 473 HRIPEAVEIFREMPRK---GCKPDVYTFN 498
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL +M G P+ ++ NILI+ C G + A + RG PD+ TF +LING
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+I L + R+ + + + PD V ++
Sbjct: 645 CRAGRIEDGLTMFRKLQAE---GIPPDTVTFN 673
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ +M L+G P+ VT N LI+ C G+I ++F ++ G PD TF TL++
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 67 GFCQMGQIRPALQLLRRAEDDELV 90
C+ G + A LL +D V
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFV 701
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ + L +M L G +P+ T N +I C +IN A + + RG+ PD T+ L
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+NG C++G++ A L R KP++VI++
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIP-------KPEIVIFN 357
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
H M+ + PN VT LID YC G + A S++ +R+ +V T+ LI+GFC+
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+++ A ++ R +D +++P+ ++Y+
Sbjct: 247 GEMQRAEEMYSRMVED---RVEPNSLVYT 272
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 16 LKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIR 75
LK PN VT + ID +C G++ A F ++++ P+V TF LI+G+C+ G +
Sbjct: 156 LKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLE 215
Query: 76 PALQLLRRAEDDELVQLKPDVVIYS 100
A+ L + V++ +VV Y+
Sbjct: 216 VAVSLYKEMRR---VRMSLNVVTYT 237
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G P+ + N ++ C LGQ+ FA + ++ + G +PDV ++ +LI+G C+ G IR
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A +L KPD+V ++
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFN 133
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
+ ++M+ I P+ T N+L+ C LG + AF ++ + +RG QPD+ T+ L+ G C
Sbjct: 462 VKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLC 521
Query: 70 QMGQIRPALQLLRR 83
G+++ A LL R
Sbjct: 522 WKGRLKKAESLLSR 535
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S+ +S+ + M G+ PN T+N LI Y G++ A+ V +R PD T+ L
Sbjct: 422 SSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLL 481
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ C +G +R A QL DE+++ +PD++ Y+
Sbjct: 482 LGAACTLGHLRLAFQLY-----DEMLRRGCQPDIITYT 514
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ + +M K + + V N++I C G + A+ + KRG PDVFT+ TLI+
Sbjct: 284 ALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 343
Query: 67 GFCQMGQIRPALQL 80
C+ G+ A L
Sbjct: 344 ALCKEGKFDEACDL 357
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 60.5 bits (145), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ KGI PN T + L+D C G+ A +F + RG +P++ T+ TLI G C+
Sbjct: 252 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 311
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIY 99
+I+ A++LL R L LKPD +Y
Sbjct: 312 KIQEAVELLDRM---NLQGLKPDAGLY 335
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 14 MQLKGIMPNFVTSNILIDCYC-HLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
M+ G+ P + N+LI C + G ++ +F + KRG PD +T+ TLI+G C+ G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I A +L + + P VV Y+
Sbjct: 207 RIDEAKKLFTEMVEKDCA---PTVVTYT 231
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 60.5 bits (145), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+ +G++P+ VT N +ID + +G+++ F ++ +PDV T+ LIN FC
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 343
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G++ L+ R + + LKP+VV YS
Sbjct: 344 KFGKLPIGLEFYREMKGN---GLKPNVVSYS 371
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P T NI+IDC C G + A +F ++ RG PD T+ ++I+GF ++G++
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ +D + +PDV+ Y+
Sbjct: 317 VCFFEEMKD---MCCEPDVITYN 336
Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P+ +T N LI+C+C G++ + ++ G +P+V +++TL++ FC+ G ++ A++
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 81 ---LRRAEDDELVQLKPDVVIYS 100
+RR V L P+ Y+
Sbjct: 390 YVDMRR------VGLVPNEYTYT 406
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ G+ PN V+ + L+D +C G + A + +R+ G P+ +T+ +LI+ C++G
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ A +L +E++Q ++ +VV Y+
Sbjct: 417 NLSDAFRL-----GNEMLQVGVEWNVVTYT 441
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 59.7 bits (143), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ + ++L +M KGI +++I C G++N ++VF + ++G +P+V +
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LI+G+ + G + A++LL R D+ KPDVV YS
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDE---GFKPDVVTYS 401
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG PN +LID Y G + A + + G++PDV T++ ++NG C+ G+
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 74 IRPALQLLRRAEDDEL 89
+ AL D L
Sbjct: 413 VEEALDYFHTCRFDGL 428
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ GI P T N L++ ++ A VF + +PD+ T+ T+I G+C+ G
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271
Query: 73 QIRPALQLLRRAE 85
Q + A++ LR E
Sbjct: 272 QTQKAMEKLRDME 284
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M GI PN +T NILI C G + + +FA +++ G PD++ + I FC+M
Sbjct: 519 KEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKM 578
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++ A +LL+ + LKPD YS
Sbjct: 579 RKVKKAEELLKTMLR---IGLKPDNFTYS 604
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ +GI PN VT N + Y G + V + G++PDV TF+ +IN C+
Sbjct: 450 EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+I+ A + E+++ ++P+ + Y+
Sbjct: 510 EIKDAFDCFK-----EMLEWGIEPNEITYN 534
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
QM+ G P+ T NILI C G ++ A + + + G +P+VFT+ LI+GF
Sbjct: 204 QQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIA 263
Query: 72 GQIRPALQLL 81
G++ AL+ L
Sbjct: 264 GRVDEALKQL 273
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
Q+ G+ P+ N +ID ++ A+ F +R G +PD FT+ LI+G C+ G
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++L+++ E + +P+V Y+
Sbjct: 230 VVDEAIRLVKQMEQE---GNRPNVFTYT 254
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
QM + G++ + + N +IDC C +I A ++ RG P++ TF T ++G+
Sbjct: 414 KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVR 473
Query: 72 GQIRPALQLLRRAEDDELVQ-LKPDVVIYS 100
G ++ +L + LV KPDV+ +S
Sbjct: 474 GDVKKVHGVLEKL----LVHGFKPDVITFS 499
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 59.7 bits (143), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M LKGI+PN VT N LI C LG ++ A + + ++G P+ T+ TLI+G
Sbjct: 776 TLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Query: 69 CQMGQIRPALQLLRRAEDDELVQ 91
+ G + A++L + + LV+
Sbjct: 836 VKSGNVAEAMRLKEKMIEKGLVR 858
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ N N LI+ YC GQ+ A +F+ + +PD T+ TL++G+C+ G + A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
L+L + E+V P V+ Y+
Sbjct: 421 LKLCDQMCQKEVV---PTVMTYN 440
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 59.7 bits (143), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+GI P+ VT N++I+ +C G++ A + ++K G P+V+ ++ L+NGFC++G+I+
Sbjct: 262 EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQE 321
Query: 77 ALQLLRRAEDDELVQ--LKPDVVIYS 100
A Q DE+ + LK D V Y+
Sbjct: 322 AKQTF-----DEVKKTGLKLDTVGYT 342
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ G PN + L++ +C +G+I A F ++K G + D + TL+N FC+ G+
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 74 IRPALQLL 81
A++LL
Sbjct: 354 TDEAMKLL 361
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 13 QMQLKGI-MPNFVTSNILIDCYCHLGQINFAFSVFA-TIRKRGYQPDVFTFATLINGFCQ 70
+M+ GI PN +T + L+DC + A +F I K G PD TF +INGFC+
Sbjct: 221 EMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCR 280
Query: 71 MGQIRPALQLL 81
G++ A ++L
Sbjct: 281 AGEVERAKKIL 291
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H + + M G PN VT LID C G ++ A + + K G QP++FT+
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++NG C+ G I A++L+ E L D V Y+
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEF---EAAGLNADTVTYT 530
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H+M KG+ P+ VT LI+ YC G + AF V + + G P+V T+ TLI+G C
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G + A +LL + L+P++ Y+
Sbjct: 468 KEGDLDSANELLHEMWK---IGLQPNIFTYN 495
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +GI+P+ V LID +C G I A F + R PDV T+ +I+GFCQ+G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A +L L+PD V ++
Sbjct: 401 DMVEAGKLFHEM---FCKGLEPDSVTFT 425
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+T I + + G+ N + NI+I C LG+I A + + +GY PDV +++T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+NG+C+ G++ +L+ E + LKP+ IY
Sbjct: 288 VNGYCRFGELDKVWKLI---EVMKRKGLKPNSYIYG 320
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V L M+ KG+ PN +I C + ++ A F+ + ++G PD + TLI+
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GFC+ G IR A + ++ PDV+ Y+
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDIT---PDVLTYT 390
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M + I P+ +T +I +C +G + A +F + +G +PD TF LING+C+
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 72 GQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
G ++ A ++ + ++Q P+VV Y+
Sbjct: 435 GHMKDAFRV-----HNHMIQAGCSPNVVTYT 460
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ L + + G+ + VT L+D YC G+++ A + + +G QP + TF L+N
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 67 GFCQMGQIRPALQLL 81
GFC G + +LL
Sbjct: 570 GFCLHGMLEDGEKLL 584
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L H+M G+ PN T N +++ C G I A + G D T+ TL++ +
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 69 CQMGQIRPALQLLRR 83
C+ G++ A ++L+
Sbjct: 537 CKSGEMDKAQEILKE 551
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H + + M G PN VT LID C G ++ A + + K G QP++FT+
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++NG C+ G I A++L+ E L D V Y+
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEF---EAAGLNADTVTYT 530
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H+M KG+ P+ VT LI+ YC G + AF V + + G P+V T+ TLI+G C
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G + A +LL + L+P++ Y+
Sbjct: 468 KEGDLDSANELLHEMWK---IGLQPNIFTYN 495
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +GI+P+ V LID +C G I A F + R PDV T+ +I+GFCQ+G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A +L L+PD V ++
Sbjct: 401 DMVEAGKLFHEM---FCKGLEPDSVTFT 425
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+T I + + G+ N + NI+I C LG+I A + + +GY PDV +++T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+NG+C+ G++ +L+ E + LKP+ IY
Sbjct: 288 VNGYCRFGELDKVWKLI---EVMKRKGLKPNSYIYG 320
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V L M+ KG+ PN +I C + ++ A F+ + ++G PD + TLI+
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GFC+ G IR A + ++ PDV+ Y+
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDIT---PDVLTYT 390
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M + I P+ +T +I +C +G + A +F + +G +PD TF LING+C+
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 72 GQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
G ++ A ++ + ++Q P+VV Y+
Sbjct: 435 GHMKDAFRV-----HNHMIQAGCSPNVVTYT 460
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ L + + G+ + VT L+D YC G+++ A + + +G QP + TF L+N
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 67 GFCQMGQIRPALQLL 81
GFC G + +LL
Sbjct: 570 GFCLHGMLEDGEKLL 584
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L H+M G+ PN T N +++ C G I A + G D T+ TL++ +
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 69 CQMGQIRPALQLLRR 83
C+ G++ A ++L+
Sbjct: 537 CKSGEMDKAQEILKE 551
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 15 QLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQI 74
+ K I P+ V+ N ++ YC LG ++ A S F T+ K G P V++ LING C +G I
Sbjct: 214 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 75 RPALQLLRRAEDDELVQLKPDVVIYS 100
AL+L A D ++PD V Y+
Sbjct: 274 AEALEL---ASDMNKHGVEPDSVTYN 296
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++P+ + NILI+ C +G I A + + + K G +PD T+ L GF +G I A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+++R D L PDV+ Y+
Sbjct: 312 WEVIRDMLDK---GLSPDVITYT 331
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ + L+ M G+ P+ VT NIL + LG I+ A+ V + +G PDV T+ L
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 65 INGFCQMGQIRPALQLLR 82
+ G CQ+G I L LL+
Sbjct: 334 LCGQCQLGNIDMGLVLLK 351
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPD-VFTFATLINGFCQMGQIR 75
KG+ P+ +T IL+ C LG I+ + + RG++ + + + +++G C+ G+I
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 76 PALQLLRRAEDDELVQLKPDVVIYS 100
AL L + + D L PD+V YS
Sbjct: 381 EALSLFNQMKAD---GLSPDLVAYS 402
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 15 QLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQI 74
+ K I P+ V+ N ++ YC LG ++ A S F T+ K G P V++ LING C +G I
Sbjct: 214 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 75 RPALQLLRRAEDDELVQLKPDVVIYS 100
AL+L A D ++PD V Y+
Sbjct: 274 AEALEL---ASDMNKHGVEPDSVTYN 296
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++P+ + NILI+ C +G I A + + + K G +PD T+ L GF +G I A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+++R D L PDV+ Y+
Sbjct: 312 WEVIRDMLDK---GLSPDVITYT 331
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
+ + L+ M G+ P+ VT NIL + LG I+ A+ V + +G PDV T+ L
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 65 INGFCQMGQIRPALQLLR 82
+ G CQ+G I L LL+
Sbjct: 334 LCGQCQLGNIDMGLVLLK 351
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPD-VFTFATLINGFCQMGQIR 75
KG+ P+ +T IL+ C LG I+ + + RG++ + + + +++G C+ G+I
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 76 PALQLLRRAEDDELVQLKPDVVIYS 100
AL L + + D L PD+V YS
Sbjct: 381 EALSLFNQMKAD---GLSPDLVAYS 402
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ V+ M KG PN T NIL++ C +++ A + ++ + PD TF T
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 64 LINGFCQMGQIRPALQLLRRAED 86
LI+GFC+ G + A L R+ E+
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEE 594
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L+++M KG++P T NIL++ C +G ++ A + + +GY PD+FTF LI+G+
Sbjct: 413 LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ AL++L D+ + PDV Y+
Sbjct: 473 TQLKMENALEILDVMLDN---GVDPDVYTYN 500
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +G+ P+ T N LI YC G + A + G+ PD FT+ +LI+G C G
Sbjct: 311 KMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ AL L A +KP+V++Y+
Sbjct: 371 ETNRALALFNEALGK---GIKPNVILYN 395
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 16 LKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIR 75
G +P+ T LID CH G+ N A ++F +G +P+V + TLI G G I
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 76 PALQLLRRAEDDELVQLKPDVVIYS 100
A QL + L+ P+V ++
Sbjct: 409 EAAQLANEMSEKGLI---PEVQTFN 430
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G++PN T N+ I C G+++ A + + ++G +PDV T+ LI G C+ + +
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A L + ++ L+PD Y+
Sbjct: 305 AEVYLGKMVNE---GLEPDSYTYN 325
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
Y L +M KGI PN ++ + LI+ C+ GQI AFS + KRG P+++T ++
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQ---LKPDVVIYS 100
L+ G G AL L +++++ L+P+VV Y+
Sbjct: 322 LVKGCFLRGTTFDALDLW-----NQMIRGFGLQPNVVAYN 356
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ PN V N L+ +C G I A SVF+ + + G P++ T+ +LINGF + G + A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ + + P+VV+Y+
Sbjct: 407 VYIWNKMLTSGCC---PNVVVYT 426
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKR-GYQPDVFTFA 62
+ + L M+ GI P+ +T N L+ G+ A +F +R+ G PD +TF
Sbjct: 154 FQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFN 213
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLINGFC+ + A ++ + D EL PDVV Y+
Sbjct: 214 TLINGFCKNSMVDEAFRIFK---DMELYHCNPDVVTYN 248
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ P+ T N LI+ +C ++ AF +F + PDV T+ T+I+G C+ G+++ A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 78 LQ----LLRRAEDDELVQLKPDVVIYS 100
+L++A D + P+VV Y+
Sbjct: 264 HNVLSGMLKKATD-----VHPNVVSYT 285
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRG--YQPDVFTFATLINGFCQM 71
M+L P+ VT N +ID C G++ A +V + + K+ P+V ++ TL+ G+C
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMK 294
Query: 72 GQIRPAL----QLLRRAEDDELVQLKPDVVIYS 100
+I A+ +L R LKP+ V Y+
Sbjct: 295 QEIDEAVLVFHDMLSRG-------LKPNAVTYN 320
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 22 NFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLL 81
N NIL++ +C G I+ A VF I KR QP V +F TLING+C++G + +L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 82 RRAEDDELVQLKPDVVIYS 100
+ E + +PDV YS
Sbjct: 299 HQMEKS---RTRPDVFTYS 314
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M KG+ P+ V N L++ +C G + A ++ + +RG +PD T+ TLI+GFC+
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 72 GQIRPALQLLRRAEDDELVQL 92
G + AL+ +R+ D ++L
Sbjct: 429 GDVETALE-IRKEMDQNGIEL 448
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+M GI P+ VT +++D +C G F + ++ G+ P V T+ L+NG C++
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 72 GQIRPALQLLRRAEDDELVQLK--PDVVIYS 100
GQ++ A LL D ++ + PD + Y+
Sbjct: 534 GQMKNADMLL-----DAMLNIGVVPDDITYN 559
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L +M +G++PN V LI + G+I+ + + +G QPD+ + TL+NGF
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 69 CQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
C+ G + A ++ D +++ L+PD + Y+
Sbjct: 391 CKNGDLVAARNIV-----DGMIRRGLRPDKITYT 419
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
++ + + P V+ N LI+ YC +G ++ F + + K +PDVFT++ LIN C+
Sbjct: 265 EITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKEN 324
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
++ A L DE+ + L P+ VI++
Sbjct: 325 KMDGAHGLF-----DEMCKRGLIPNDVIFT 349
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L HQM+ P+ T + LI+ C +++ A +F + KRG P+ F TLI+G
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 70 QMGQIRPALQLLRRAEDDELVQ-LKPDVVIYS 100
+ G+I L++ + L + L+PD+V+Y+
Sbjct: 357 RNGEI----DLMKESYQKMLSKGLQPDIVLYN 384
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M +KG+ PN VT +ID YC G + AF +F ++ +G PD F + TL++G C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 70 QMGQIRPALQLL 81
++ + A+ +
Sbjct: 744 RLNDVERAITIF 755
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
S+ +M +G+ PN + N+L+ +C G+I A + + +G P+ T+ T+I+G+
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G + A +L ++ +L L PD +Y+
Sbjct: 708 CKSGDLAEAFRLF---DEMKLKGLVPDSFVYT 736
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ KGI P+ + +LI+ + LG + A S+F + + G P+V + L+ GFC+ G
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIY 99
+I A +LL ++ + L P+ V Y
Sbjct: 677 EIEKAKELL---DEMSVKGLHPNAVTY 700
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+GI+ + T +L++ +++ A +F +R +G PDVF++ LINGF ++G ++
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 77 ALQLLRRAEDDELVQ--LKPDVVIYS 100
A + DE+V+ L P+V+IY+
Sbjct: 646 ASSIF-----DEMVEEGLTPNVIIYN 666
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
PN VT NI+ID C G + A +F ++ P V T+ +L+NG+ +MG
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG-------- 854
Query: 81 LRRAED----DELVQ--LKPDVVIYS 100
RRAE DE + ++PD ++YS
Sbjct: 855 -RRAEMFPVFDEAIAAGIEPDHIMYS 879
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 15 QLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQI 74
+L G+MPN + N+L+ +C ++ A+ +F + +R PDV ++ LI GFC+ GQ+
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 75 RPALQLL 81
A++LL
Sbjct: 242 NGAMELL 248
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M+ T +S Q+Q KG+ P+ VT N LI Y G + AF + + +G+ P V+T
Sbjct: 251 MEKVGTFLS---QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYT 307
Query: 61 FATLINGFCQMGQIRPA----LQLLRRAEDDELVQLKPDVVIY 99
+ T+ING C+ G+ A ++LR L PD Y
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSG-------LSPDSTTY 343
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M + + P+ T ILID +C LG + A +F ++++ + DV T+ TL++GF
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++G I A ++ E++ P + YS
Sbjct: 527 KVGDIDTAKEIWADMVSKEIL---PTPISYS 554
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L ++M +G + VT N ++ C + A +F + +R PD +T L
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+G C++G ++ A++L ++ ++ +++ DVV Y+
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEK---RIRLDVVTYN 519
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H + + +M K I P + N +I YC G + S + G+ PD ++
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI GF + + A L+++ E+++ L PDV Y+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQ-GGLVPDVFTYN 661
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 15 QLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQI 74
+L G+MPN + N+L+ +C ++ A+ +F + +R PDV ++ LI GFC+ GQ+
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 75 RPALQLLRRAEDDELVQ-LKPDVVIYS 100
A++LL DD L + PD + Y+
Sbjct: 242 NGAMELL----DDMLNKGFVPDRLSYT 264
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S L +M + ++P+ + ILI +C GQ+N A + + +G+ PD ++ TL
Sbjct: 207 SIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTL 266
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+N C+ Q+R A +LL R +L PD+V Y+
Sbjct: 267 LNSLCRKTQLREAYKLLCRM---KLKGCNPDLVHYN 299
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P+ T N L++ C G + A + + + GY PDV+T+ ++I+G C++G+++ A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 78 LQLLRRAEDDELV--QLKPDVVIYS 100
+++L D+++ P+ V Y+
Sbjct: 350 VEVL-----DQMITRDCSPNTVTYN 369
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L QM ++G P+ T N L+ +C G I A + + G +PD+ T+ TLI+G C
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 70 QMGQIRPALQLLR 82
+ G++ A +LLR
Sbjct: 587 KAGRVEVASKLLR 599
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L+ + KGI+P+ T N LI C A +F +R +G +PD FT+ LI+
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 69 CQMGQIRPALQLLRRAE 85
C G++ AL +L++ E
Sbjct: 446 CSKGKLDEALNMLKQME 462
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+++ + L +M+ KG P+ T N+LID C G+++ A ++ + G V T+
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 62 ATLINGFCQMGQIRPALQLLRRAE 85
TLI+GFC+ + R A ++ E
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEME 497
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M++ G+ N VT N LID C ++ A + + G +PD +T+ +L+ FC+ G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIY 99
I+ A +++ + +PD+V Y
Sbjct: 555 DIKKAADIVQAMTSN---GCEPDIVTY 578
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+++ QM+L G + +T N LID +C + A +F + G + T+ TLI+
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQL--KPDVVIYS 100
G C+ ++ A QL+ D+++ KPD Y+
Sbjct: 514 GLCKSRRVEDAAQLM-----DQMIMEGQKPDKYTYN 544
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ + QM + PN VT N LI C Q+ A + + +G PDV TF +LI
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 67 GFCQMGQIRPALQLLRR 83
G C R A++L
Sbjct: 409 GLCLTRNHRVAMELFEE 425
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM KGI P+ + NIL+D C LG ++ A ++ +++ G PD T+ L++G+C +G
Sbjct: 351 QMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Query: 73 QIRPALQLLR 82
++ A LL+
Sbjct: 411 KVDAAKSLLQ 420
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M L GI P T N+LI C ++ A +F + ++G +P+ FTF L+ G+C
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G L+LL E ++ P+ VIY+
Sbjct: 194 KAGLTDKGLELLNAMESFGVL---PNKVIYN 221
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L + M+ G++PN V N ++ +C G+ + + + +R+ G PD+ TF + I+
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 68 FCQMGQIRPALQLLRRAEDDELVQL-KPDVVIYS 100
C+ G++ A ++ E DE + L +P+ + Y+
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYN 295
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M+ G PN VT LI Y ++++A +F T+ G P++ T++ LI+G C+
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIY 99
GQ+ A Q+ R + V PDV +Y
Sbjct: 602 GQVEKACQIFERMCGSKDV---PDVDMY 626
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
PN V +ID C +G+ + A+ + + ++G QP+V T+ +I+GF +G+I L+L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 81 LRR 83
L R
Sbjct: 802 LER 804
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
Y S+ +M +G +P+ T + +++ C+ ++ AF +F +++ G DV+T+
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+++ FC+ G I A + + V P+VV Y+
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMRE---VGCTPNVVTYT 557
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM KG+MPN +T N LI+ YC G I A V + R P+ T+ LI G+C+
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-S 441
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ +L + + +++ PDVV Y+
Sbjct: 442 NVHKAMGVLNKMLERKVL---PDVVTYN 466
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L +M+ GI PN T +LID C + A + + ++G P+V T+ L
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 65 INGFCQMGQIRPALQLLRRAEDDEL 89
ING+C+ G I A+ ++ E +L
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKL 424
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
QM G P+ T I YC G++ A + A +R+ G PD+FT+++LI G+ +
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 72 GQIRPALQLLRRAED 86
GQ A +L+R D
Sbjct: 686 GQTNFAFDVLKRMRD 700
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M + ++P+ VT N LID C G + A+ + + + RG PD +T+ ++I+ C+
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 72 GQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
++ A L D L Q + P+VV+Y+
Sbjct: 511 KRVEEACDLF-----DSLEQKGVNPNVVMYT 536
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M + PN T N +++ YC LG + A + I + G PD FT+ +LI G+CQ
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 73 QIRPALQLL 81
+ A ++
Sbjct: 268 DLDSAFKVF 276
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K L ++ KG+ PN V LID YC G+++ A + + + P+ TF
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 62 ATLINGFCQMGQIRPALQL 80
LI+G C G+++ A L
Sbjct: 571 NALIHGLCADGKLKEATLL 589
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + VI L H+M+ GI + + ILI C+C +++ A ++ + K G++P + T
Sbjct: 92 MNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVT 151
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+L+NGFCQ + + A+ L+ + V P+VVIY+
Sbjct: 152 LGSLLNGFCQGNRFQEAVSLVDSMDGFGFV---PNVVIYN 188
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG P+ VT N LI +C ++ +F + +G D FT+ TLI+G+CQ G+
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A ++ R D + PD+V Y+
Sbjct: 375 LNVAQKVFNRMVD---CGVSPDIVTYN 398
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ P+ VT NIL+DC C+ G+I A + ++K D+ T+ +I G C+ +++ A
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 78 LQLLRRAEDDELVQLKPDVVIY 99
L R +KPD + Y
Sbjct: 449 WCLFRSLTRK---GVKPDAIAY 467
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +G++ + T N LI YC G++N A VF + G PD+ T+ L++ C G
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I AL ++ ED + ++ D++ Y+
Sbjct: 409 KIEKALVMV---EDLQKSEMDVDIITYN 433
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ +SL M G +PN V N +I+ C +N A VF + K+G + D T+ T
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LI+G G+ A +LLR D ++ P+V+ ++
Sbjct: 225 LISGLSNSGRWTDAARLLR---DMVKRKIDPNVIFFT 258
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%)
Query: 22 NFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLL 81
+ +T NI+I C ++ A+ +F ++ ++G +PD + T+I+G C+ G R A +L
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 82 RRAEDD 87
RR ++D
Sbjct: 488 RRMKED 493
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M + ++PN T N LI+ +C G + A +F + +G PDV T+ TLI GF
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 69 CQMGQIRPALQLL 81
C+ ++ ++L
Sbjct: 335 CKSKRVEDGMKLF 347
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+ KG+ P+ T N LI YC A SV + + G P++ T+ + I+GF
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 70 QMGQIRPALQLLRRAEDD 87
+ G++R A +L R +DD
Sbjct: 285 REGRMREATRLFREIKDD 302
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ N VT LID YC + I+ A + + RG+ P V T+ +++ C+ G+IR A
Sbjct: 303 VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREAN 362
Query: 79 QLL 81
+LL
Sbjct: 363 RLL 365
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG P+ VT + LI+ YC +++ +F + +RG + T+ TLI+GFCQ+G
Sbjct: 141 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 200
Query: 74 IRPALQLLRR 83
+ A LL
Sbjct: 201 LDAAQDLLNE 210
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M KGI PN +T N +ID +CH G+ + A + + ++ PD+ TF+ LIN F +
Sbjct: 35 EMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKER 94
Query: 73 QIRPALQLLRR 83
++ A ++ +
Sbjct: 95 KVSEAEEIYKE 105
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M I P +T N +ID +C +++ A + ++ +G PDV TF+TLING+C+
Sbjct: 105 EMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK 164
Query: 73 QIRPALQLL 81
++ +++
Sbjct: 165 RVDNGMEIF 173
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +GI+ N VT LI +C +G ++ A + + G PD TF ++ G C
Sbjct: 175 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 234
Query: 73 QIRPA---LQLLRRAEDDEL 89
++R A L+ L+++ED L
Sbjct: 235 ELRKAFAILEDLQKSEDHHL 254
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + V SL + G+ PN T N+LI C + A + K G++PDVF++
Sbjct: 128 KQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSY 187
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+T+IN + G++ AL+L DE+ + + PDV Y+
Sbjct: 188 STVINDLAKAGKLDDALELF-----DEMSERGVAPDVTCYN 223
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M GI+PN V+ + LI+ Y + G+ AFSVF + K G+ P FT+ +L+ G C+ G
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 74 IRPALQLLR 82
+R A + L+
Sbjct: 634 LREAEKFLK 642
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ G+ +T +ID C G ++ A + + K G PD+ T++ LINGFC++G
Sbjct: 433 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ + A +++ R V L P+ +IYS
Sbjct: 493 RFKTAKEIVCRIYR---VGLSPNGIIYS 517
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+V S +M + I P+ T NILI+ C G + + + K GY P + T+ T++
Sbjct: 216 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275
Query: 66 NGFCQMGQIRPALQLL 81
+ +C+ G+ + A++LL
Sbjct: 276 HWYCKKGRFKAAIELL 291
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ I L M+ KG+ + T N+LI C +I + + +RKR P+ T+ T
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 64 LINGFCQMGQIRPALQLL 81
LINGF G++ A QLL
Sbjct: 344 LINGFSNEGKVLIASQLL 361
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
++ + + + M+ KG+ P+ V+ +L+D C + + A + +++ G T+
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I+G C+ G + A+ LL D + PD+V YS
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKD---GIDPDIVTYS 482
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++M GI P+ VT + LI+ +C +G+ A + I + G P+ ++TLI
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 68 FCQMGQIRPALQL 80
C+MG ++ A+++
Sbjct: 523 CCRMGCLKEAIRI 535
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
M KG P+ VT + LI+ YC +++ +F + +RG + T+ TLI+GFCQ+G
Sbjct: 35 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 94
Query: 73 QIRPALQLLRR 83
+ A LL
Sbjct: 95 DLDAAQDLLNE 105
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
I P +T N +ID +C +++ A + ++ +G PDV TF+TLING+C+ ++ +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 79 QL 80
++
Sbjct: 66 EI 67
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +GI+ N VT LI +C +G ++ A + + G PD TF ++ G C
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 73 QIRPA---LQLLRRAEDDEL 89
++R A L+ L+++ED L
Sbjct: 130 ELRKAFAILEDLQKSEDHHL 149
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M G +P+ + LI +C LG+ A + + G PDV T+ +I+G+C+ G+
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
I AL +L R + + PDVV Y+
Sbjct: 188 INNALSVLDR------MSVSPDVVTYN 208
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M KG P+ VT NILI+ C G + A + + + G QP+ ++ L++GFC+ +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A++ L R PD+V Y+
Sbjct: 395 MDRAIEYLERMVSRGCY---PDIVTYN 418
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M + P+ +T ILI+ C + A + +R RG PDV T+ L+NG C+ G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 73 QIRPALQLL 81
++ A++ L
Sbjct: 289 RLDEAIKFL 297
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I + M G PN +T NI++ C G+ A + A + ++G+ P V TF LIN
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 68 FCQMGQIRPALQLLRR 83
C+ G + A+ +L +
Sbjct: 354 LCRKGLLGRAIDILEK 369
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S IS+ +M G+ PN +T N LI+ +C + A +F +++ +G P + L
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+ +C++G+I L E + +V PDV Y+
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIV---PDVGTYN 440
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
+G +P N+LID YC LG+I+ F++ + + G PDV T+ LI G C+ G I
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 77 ALQLLRRAEDDELVQLKPDVVIY 99
A +L + L PD+V +
Sbjct: 455 AKKLFDQLTSKGL----PDLVTF 473
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M+ +GI+P+ T N LI C G I A +F + +G PD+ TF L+ G+
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGY 480
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+ R A LL+ + LKP + Y+
Sbjct: 481 CRKGESRKAAMLLKEMSK---MGLKPRHLTYN 509
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M + I PN T N++I+ C G++N A V ++ G P+V ++ TLI+G+C++G
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M + + PN ++ N LI+ C+ G+I+ A S+ + G QP++ T+ LINGFC+
Sbjct: 321 EMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 73 QIRPALQLL 81
++ AL +
Sbjct: 381 MLKEALDMF 389
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 53/90 (58%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
KH+ +++SL +++ G+ P+ + N +I+ G ++ A +F +++ G +P TF
Sbjct: 368 KHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTF 427
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQ 91
TLI G+ ++G++ + +LL DE++Q
Sbjct: 428 NTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +GI PN VT ILI C G + A +F ++ G PD L++GFC++G+
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 74 IRPALQLLRRAEDDELV 90
+ A +LLR E D V
Sbjct: 284 MVEAFELLRLFEKDGFV 300
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P+ V+ N+LI+ +C G I+ A + ++ +G PD T+ TLING ++G+ A
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 78 LQLLRRAEDD 87
+L A+DD
Sbjct: 572 FKLF-YAKDD 580
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL +M P+ T ILI C G + A +F I K G P V TF LI+G
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Query: 69 CQMGQIRPALQLLRRAE 85
C+ G+++ A LL + E
Sbjct: 454 CKSGELKEARLLLHKME 470
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++MQ G P+ V N L+D +C LG++ AF + K G+ + +++LI+G
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ + A +L +KPD+++Y+
Sbjct: 315 RARRYTQAFELYANMLKK---NIKPDIILYT 342
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + + +L+H M+ GI P+ + LID Y G+++ A +F + +G P+VFT+
Sbjct: 704 KPLAALTTLNH-MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTY 762
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++I G C G+ R A LL+ E P+ V+YS
Sbjct: 763 NSMIRGLCMAGEFREACWLLKEMESR---GCNPNFVVYS 798
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
H+M K I PN +T + LID Y G+++ SV+ + + P+VFT+++LI G C
Sbjct: 107 HEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMH 166
Query: 72 GQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
++ A+++L D ++ P+VV YS
Sbjct: 167 NRVDEAIKML-----DLMISKGCTPNVVTYS 192
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ ++ QM+ GI + V ILID C + A V ++ RG P+V T+++LI G
Sbjct: 33 VYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITG 92
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G++ A RR + + ++ P+V+ +S
Sbjct: 93 LCKSGRLADA---ERRLHEMDSKKINPNVITFS 122
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M GI P+ VT++ L++ +C I A V + K G + DV LI+ C+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ PAL++L+R +D + P+VV YS
Sbjct: 63 LVVPALEVLKRMKDR---GISPNVVTYS 87
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M KG++PN + N ++D YC LGQ A V + PD FT +++I G+C
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 70 QMGQIRPALQLLRRAEDDEL 89
+ G + AL + +D +
Sbjct: 807 KKGDMEEALSVFTEFKDKNI 826
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M +G+ PN +T +I C +G++ AF +F I G + D F + TLI+G
Sbjct: 297 LGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDG 356
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G + A +L D E ++P ++ Y+
Sbjct: 357 ICRKGNLNRAFSML---GDMEQRGIQPSILTYN 386
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Query: 29 LIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDE 88
LID C G +N AFS+ + +RG QP + T+ T+ING C G++ +E DE
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRV---------SEADE 403
Query: 89 LVQ-LKPDVVIYS 100
+ + + DV+ YS
Sbjct: 404 VSKGVVGDVITYS 416
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M KG+ + V+ +ILID G + A + + K G +P++ T+ +I G C+MG
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 73 QIRPALQLLRR 83
++ A L R
Sbjct: 327 KLEEAFVLFNR 337
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 19 IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPAL 78
+ P+ T + +I YC G + A SVF + + D F F LI GFC G++ A
Sbjct: 791 VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEAR 850
Query: 79 QLLR 82
LLR
Sbjct: 851 GLLR 854
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P+ VT LID YC +GQ++ F ++ + RG P+ FT++ LIN C ++ A
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 78 LQLLRRAEDDELV 90
+LL + +++
Sbjct: 402 RELLGQLASKDII 414
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL M GI P VT N+L+D Y G++ A + + G PDV TF +LI+G+
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C++GQ+ Q R E+ + P+ YS
Sbjct: 358 CRVGQVS---QGFRLWEEMNARGMFPNAFTYS 386
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 25 TSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRA 84
T NILI C +G+ A + + G +PD+ T+ TLI GFC+ ++ A ++ +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 85 EDDELVQLKPDVVIYS 100
+ + PDVV Y+
Sbjct: 268 KSGSVCS--PDVVTYT 281
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGY-QPDVFTFATLINGFCQMGQIRP 76
G P+ VT N LI +C ++N A +F ++ PDV T+ ++I+G+C+ G++R
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 77 ALQLLRRAEDDELVQL 92
A LL D++++L
Sbjct: 296 ASSLL-----DDMLRL 306
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P+ VT LID YC +GQ++ F ++ + RG P+ FT++ LIN C ++ A
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 78 LQLLRRAEDDELV 90
+LL + +++
Sbjct: 402 RELLGQLASKDII 414
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
SL M GI P VT N+L+D Y G++ A + + G PDV TF +LI+G+
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C++GQ+ Q R E+ + P+ YS
Sbjct: 358 CRVGQVS---QGFRLWEEMNARGMFPNAFTYS 386
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 25 TSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRA 84
T NILI C +G+ A + + G +PD+ T+ TLI GFC+ ++ A ++ +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 85 EDDELVQLKPDVVIYS 100
+ + PDVV Y+
Sbjct: 268 KSGSVCS--PDVVTYT 281
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGY-QPDVFTFATLINGFCQMGQIRP 76
G P+ VT N LI +C ++N A +F ++ PDV T+ ++I+G+C+ G++R
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 77 ALQLLRRAEDDELVQL 92
A LL D++++L
Sbjct: 296 ASSLL-----DDMLRL 306
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M L G P+ VT N LI Y G ++ A + + ++G +PDVFT+ TL++GF +
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G++ A+ + + KP++ ++
Sbjct: 398 GKVESAMSIFEEMRN---AGCKPNICTFN 423
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M KG+ PN +T N++I YC G+I A + A + G PD +T+ +LI+G C
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 73 QIRPALQLL 81
+ A++L
Sbjct: 554 NVDEAMRLF 562
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K Y +M G+ + V+ LID YC G + A +F + +G QP+ T
Sbjct: 447 LKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT 506
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +I +C+ G+I+ A +L E + + PD Y+
Sbjct: 507 YNVMIYAYCKQGKIKEARKLRANMEAN---GMDPDSYTYT 543
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++MQ KG+ V N LID YC G ++ A ++ + ++G+Q DVFT T+ + F
Sbjct: 386 LMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFN 445
Query: 70 QMGQIRPALQLLRR 83
++ + A Q L R
Sbjct: 446 RLKRYDEAKQWLFR 459
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFA---------FSVFATIRKRGYQPDVFTFA 62
+M G+ P+ +T NIL+D C G++ A + +F ++ +G +P+V T+
Sbjct: 40 KEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYT 99
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
T+I+GFC+ G A L R+ ++D + PD Y+
Sbjct: 100 TMISGFCKKGFKEEAYTLFRKMKEDGPL---PDSGTYN 134
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +M +G++ N VT LI G + A +F + G PD+ T+ L++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 68 FCQMGQIRPALQLLRRAEDD-------ELVQLKPDVVIYS 100
C+ G++ AL + + ED L +KP+VV Y+
Sbjct: 61 LCKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYT 99
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+L GI PN T +I+ID C GQI+ A VFA + G P+ TF L+ + G
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LQ+ + + + +PD + Y+
Sbjct: 340 RTEKVLQVYNQMKK---LGCEPDTITYN 364
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++P+ VT N+++ CY +G+I+ A + + + + G +PDV +LIN + ++ A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
++ R ++ ++LKP VV Y+
Sbjct: 558 WKMFMRMKE---MKLKPTVVTYN 577
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L M KG PN +T N L DC C ++ A + + G PDVFT+ T+I G
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 652
Query: 68 FCQMGQIRPAL 78
+ GQ++ A+
Sbjct: 653 LVKNGQVKEAM 663
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M +G+ P+ T ++L+DC C +G+++ F +++ G PDV + +ING
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ ++ AL L + + PD+ Y+
Sbjct: 1007 GKSHRLEEALVLFNEMKTSR--GITPDLYTYN 1036
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G PN NILI+ + G+ + A ++F + K G +PD+ T++ L++ C +G++
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
L + ++ L PDVV Y+
Sbjct: 981 LHYFKELKES---GLNPDVVCYN 1000
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ G +P+ VT IL+D C G AF +R +G P++ T+ TLI G ++
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIY 99
++ AL+L E + +KP Y
Sbjct: 413 RLDDALELFGNMES---LGVKPTAYTY 436
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+V+ L +M+ G+ PN T I I G+IN A+ + + G PDV T+ LI
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
+ C ++ A ++ + + + KPD V Y
Sbjct: 301 DALCTARKLDCAKEVFEKMKTG---RHKPDRVTY 331
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ KG+ P+ VT N LID YC +I A+ + +R+ PDV T+ T+I G +GQ
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
A ++L+ ++ PDV Y+
Sbjct: 297 PDKAREVLKEMKE---YGCYPDVAAYN 320
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L + M+ +G + + NI+ID +C G++N A+ + ++ +G++P V T+ ++I+G
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ ++ A L A+ +++ +VVIYS
Sbjct: 634 KIDRLDEAYMLFEEAKSK---RIELNVVIYS 661
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
T L MQ G+ PN T NI++D C +++ A ++F + + PD TF +LI
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 66 NGFCQMGQIRPALQLLRRAEDDE 88
+G ++G++ A ++ + D +
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSD 477
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M + ++L +M+ I + V N +ID C G A ++F + +G PDV T
Sbjct: 54 MGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ +I+ FC+ G+ A QLLR D Q+ PDVV +S
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLR---DMIERQINPDVVTFS 150
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
M +GI P +T N +ID +C ++N A + ++ + PDV TF+TLING+C+
Sbjct: 171 DMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK 230
Query: 73 QIRPALQL 80
++ +++
Sbjct: 231 RVDNGMEI 238
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M K P+ VT + LI+ YC +++ +F + +RG + T+ TLI+GFCQ+G
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266
Query: 74 IRPALQLL 81
+ A LL
Sbjct: 267 LDAAQDLL 274
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P+ VT L++ C G++ A ++ + + G+QP + T+ING C+MG A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
L LL + E+ +K VVIY+
Sbjct: 61 LNLLSKMEE---THIKAHVVIYN 80
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H+ +L +M KGI P+ +T + +ID +C G+ A + + +R PDV TF+
Sbjct: 91 HHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 63 TLINGFCQMGQIRPALQ----LLRRA 84
LIN + G++ A + +LRR
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRG 176
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
+Q+ P +T ILI+ G ++ A + + RG +PD+FT+ T+I G C+
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G + A +++R EL +PDV+ Y+
Sbjct: 277 GMVDRAFEMVRNL---ELKGCEPDVISYN 302
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
PN VT +ILI C G+I A ++ ++++G PD +++ LI FC+ G++ A++
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 81 LRRAEDDELVQLKPDVVIYS 100
L D + PD+V Y+
Sbjct: 391 LETMISDGCL---PDIVNYN 407
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+Y + L M KG P+ + LI + L I A V + K G QPDVF +
Sbjct: 104 NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYN 162
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LINGFC+M +I A ++L R + PD V Y+
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKD---FSPDTVTYN 197
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M GI P+ +T N +I C C G ++ AF + +R + P V T+ ++ GFC+
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 73 QIRPALQLLR 82
+I A+ +L
Sbjct: 523 RIEDAINVLE 532
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ K P+ VT NI+I C G+++ A V + QP V T+ LI G
Sbjct: 183 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 73 QIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ AL+L+ DE++ LKPD+ Y+
Sbjct: 243 GVDEALKLM-----DEMLSRGLKPDMFTYN 267
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ PN VT +ILID +C G+++ A S + G + V+ + +LING C+ G I A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ + +L+P VV Y+
Sbjct: 457 EGFMAEMINK---KLEPTVVTYT 476
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
H LKG++ N T N+LI +C G+I A + + G PD T+ T+IN C+
Sbjct: 776 HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRR 835
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A++L + ++PD V Y+
Sbjct: 836 NDVKKAIELWNSMTEK---GIRPDRVAYN 861
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L ++M + PN VT N++I+ YC G ++ AF + ++G PD +++ LI+G
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Query: 68 FCQMGQIRPA 77
C GQ A
Sbjct: 587 LCLTGQASEA 596
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M K + P VT L+ YC G+IN A ++ + +G P ++TF TL++G + G
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
IR A++L + +KP+ V Y+
Sbjct: 522 LIRDAVKLFNEMAE---WNVKPNRVTYN 546
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++P T +I CYC G I+ A F +++ G PD FT+ +LI+G C+ + A
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Query: 78 LQL 80
+L
Sbjct: 588 CKL 590
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G PN + LID C G I AF + + + G++P+V+T LI+G C+ G A
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 78 LQL-LRRAEDDELVQLKPDVVIYS 100
+L L+ D KP+V Y+
Sbjct: 342 FRLFLKLVRSD---TYKPNVHTYT 362
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M +G +P+ T +++ C G +N A F + G++P++ F +LI+G C+ G
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 74 IRPALQLLRRAEDDELVQ--LKPDVVIYS 100
I+ A ++L +E+V+ KP+V ++
Sbjct: 303 IKQAFEML-----EEMVRNGWKPNVYTHT 326
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVF-ATIRKRGYQPDVFTFATLINGFCQM 71
+M G PN T LID C G AF +F +R Y+P+V T+ ++I G+C+
Sbjct: 312 EMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKE 371
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A L R ++ L P+V Y+
Sbjct: 372 DKLNRAEMLFSRMKEQGLF---PNVNTYT 397
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
PN T +I YC ++N A +F+ ++++G P+V T+ TLING C+ G A +L
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 81 LRRAEDDELVQLKPDVVIYS 100
+ D+ + P++ Y+
Sbjct: 416 MNLMGDEGFM---PNIYTYN 432
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K S + L +M+ G P+ T NILI + +G+++ A ++F + + +PD+ +
Sbjct: 455 LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIIS 514
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ +LIN + G + A + ++ L PDVV YS
Sbjct: 515 YNSLINCLGKNGDVDEAHVRFKEMQEK---GLNPDVVTYS 551
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ KG+ P+ VT + L++C+ ++ A+S+F + +G QP++ T+ L++ + G
Sbjct: 537 EMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNG 596
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A+ L + + L PD + Y+
Sbjct: 597 RTAEAVDLYSKMKQQGLT---PDSITYT 621
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
I + ++ KG++ + + N + L QI+ +F ++K G PD+FT+ LI
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
F ++G++ A+ + E+ E KPD++ Y+
Sbjct: 486 SFGRVGEVDEAINIF---EELERSDCKPDIISYN 516
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 24 VTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRR 83
V N+ D LG++ AF + ++ RG PDV + TLI+G+C G++ AL L+
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI-- 446
Query: 84 AEDDELV--QLKPDVVIYS 100
DE++ + PD++ Y+
Sbjct: 447 ---DEMIGNGMSPDLITYN 462
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 29 LIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRAEDDE 88
+I +C L + A +F T+ +RG PD+FT+ +I+ +C++ +++ A L ED +
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLF---EDMK 653
Query: 89 LVQLKPDVVIYS 100
+KPDVV Y+
Sbjct: 654 QRGIKPDVVTYT 665
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 37/58 (63%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
M +G++P+ T I+I YC L ++ A S+F +++RG +PDV T+ L++ + ++
Sbjct: 617 MVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKL 674
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
K I+P+ T I+I+ YC L + A+++F +++R +PDV T++ L+N P
Sbjct: 629 KKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DP 681
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
L + R E +++ PDVV Y+
Sbjct: 682 ELDMKREMEAFDVI---PDVVYYT 702
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+LS +M+ + P+ +LID C +G + A +F + + G PD + LI
Sbjct: 747 NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC 806
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+MG ++ A + R + +KPDVV Y+
Sbjct: 807 CKMGYLKEAKMIFDRMIES---GVKPDVVPYT 835
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
+ S L +M G+ P LI +C + + A F + + PD+FT+
Sbjct: 580 YISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYT 639
Query: 63 TLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+IN +C++ + + A L ED + +KPDVV YS
Sbjct: 640 IMINTYCRLNEPKQAYALF---EDMKRRDVKPDVVTYS 674
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ + +M+ ++P+ V I+I+ YCHL + +++F +++R PDV T+ L+
Sbjct: 683 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+P L R + +KPDV Y+
Sbjct: 743 -------KPERNLSREM---KAFDVKPDVFYYT 765
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
M ++S L + + I + V N+ D LG++ A +F + +G PDV
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ TLI G C G+ A L+ + PD+VIY+
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDG---TGKTPDIVIYN 470
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 52.8 bits (125), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 20 MPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQ 79
+PN VT L+D C G ++ A + + ++ P+V T++++ING+ + G + A+
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVS 420
Query: 80 LLRRAEDDELV 90
LLR+ ED +V
Sbjct: 421 LLRKMEDQNVV 431
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ P+ N+LI +C +G+++FA S+ +R R D T+ T+I+G C+ G A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEA 180
Query: 78 LQLLRRAEDDELVQLK--PDVVIYS 100
Q L E+V++ PD V Y+
Sbjct: 181 YQFL-----SEMVKMGILPDTVSYN 200
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + + +++ KG + V N L+ YC LG++ A F + ++GY P+V T+ L
Sbjct: 300 SEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLL 359
Query: 65 INGFCQMGQIRPALQLLRRAEDDEL 89
I G+C +G + AL + D +
Sbjct: 360 IAGYCDVGMLDSALDTFNDMKTDAI 384
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M+ KG +PN T N+LI YC +G ++ A F ++ + + TF TLI G G
Sbjct: 343 EMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Query: 73 QIRPALQLLRRAEDDELVQ 91
+ L++L +D + V
Sbjct: 403 RTDDGLKILEMMQDSDTVH 421
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P+ V ++I Y G++ A +F + ++G P+VFT+ ++I GFC G+ + A
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
LL+ E P+ V+YS
Sbjct: 417 CALLKEMESR---GCNPNFVVYS 436
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + + +L M+ G +P+ N+ +D C ++ FA F + +RG +PDV +
Sbjct: 92 VKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVS 151
Query: 61 FATLINGFCQMGQIRPALQL 80
+ LING + G++ A+++
Sbjct: 152 YTILINGLFRAGKVTDAVEI 171
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
QM +K IMPN V+ + +ID + G+ + A ++F +R G D ++ TL++ + ++G
Sbjct: 399 QMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG 458
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ AL +LR V +K DVV Y+
Sbjct: 459 RSEEALDILREMAS---VGIKKDVVTYN 483
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
Y V + +M+ + ++PN +T + LID Y G A +F + G + DV ++
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
LI+ C+ G + A+ L+ DE+ + + P+VV Y+
Sbjct: 555 LIDALCKNGLVGSAVSLI-----DEMTKEGISPNVVTYN 588
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ V +MQ G+ P+ +T N L+ G A ++F + R + DVF++ T
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
L++ C+ GQ+ A ++L + + ++ P+VV YS
Sbjct: 380 LLDAICKGGQMDLAFEILAQM---PVKRIMPNVVSYS 413
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
YS L +M GI PN I I C ++ A +F ++K G P+++T++
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
+I+G+C+ G +R A L + EL+ P+VV++
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELL---PNVVVF 307
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M+ + I P+ T N LI YC + A + + + G +P++ TF+TLI+G+C
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ I+ A+ L +V PDVV Y+
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIV---PDVVTYT 483
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++ + ++PN V L+D +C ++ A S+F + K G P+++ + LI+G C
Sbjct: 291 LYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHC 350
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G + A+ LL E + L PDV Y+
Sbjct: 351 KSGNMLEAVGLLSEMES---LNLSPDVFTYT 378
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ G++PN T + +ID YC G + A+ ++ I P+V F TL++GFC+ +
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 74 IRPALQL 80
+ A L
Sbjct: 320 LVTARSL 326
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
+ L +M G+ PN +T + LID YC++ I A ++ + +G PDV T+ LI+
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 67 GFCQMGQIRPALQL 80
+ ++ AL+L
Sbjct: 488 AHFKEANMKEALRL 501
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
T SL M G+ PN N LI +C G + A + + + PDVFT+ LI
Sbjct: 322 TARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILI 381
Query: 66 NGFCQMGQIRPALQLLRRAEDDEL 89
NG C Q+ A +L ++ +++ +
Sbjct: 382 NGLCIEDQVAEANRLFQKMKNERI 405
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ L +M +KGI+P+ VT LID + + A +++ + + G P+ TFA L+
Sbjct: 462 AAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Query: 66 NGFCQMGQIRPAL 78
+GF + G++ A+
Sbjct: 522 DGFWKEGRLSVAI 534
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +++ KGI+ + VT NILI+ YC G AF++ + G QP FT+ +LI C
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVI 98
+ + R A +L + +KPD+V+
Sbjct: 444 RKNKTREADELFEKVVGK---GMKPDLVM 469
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG+ P+ V N L+D +C +G ++ AFS+ + PD T+ L+ G C G+
Sbjct: 461 KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEE 520
Query: 77 ALQLL----RRAEDDELVQLKPDVVIYS 100
A +L+ RR +KPD + Y+
Sbjct: 521 ARELMGEMKRRG-------IKPDHISYN 541
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M GI P T LI C + A +F + +G +PD+ TL++G
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 477
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C +G + A LL+ +++ + PD V Y+
Sbjct: 478 CAIGNMDRAFSLLKEM---DMMSINPDDVTYN 506
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M++ GI P VT N L+ + G+I A + + ++ +G+QPD+ T+ +++ C G+
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR 310
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
A ++LR ++ LV PD V Y+
Sbjct: 311 ---ASEVLREMKEIGLV---PDSVSYN 331
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 51.6 bits (122), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
+K + + +M +GI PN T N ++ + GQI A+ F ++KR + DV T
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
+ T+++GF G+I+ A + DE+++ + P V Y+
Sbjct: 268 YTTVVHGFGVAGEIKRARNVF-----DEMIREGVLPSVATYN 304
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M +G++P+ T N +I C + A +F + +RGY+P+V T+ LI G G
Sbjct: 290 EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Query: 73 QIRPALQLLRRAEDD 87
+ +L++R E++
Sbjct: 350 EFSRGEELMQRMENE 364
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P+ T NILI+ YC + + A +F ++++G +P+V +F TLI GF G+I +++
Sbjct: 226 PDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKM 285
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L + MQL+G+ PN +T N++I GQ++ A +F ++ G P++ ++ T++NG
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNG 520
Query: 68 FCQMGQIRPALQLLRRAEDDEL 89
Q G A+ LR+ ++ L
Sbjct: 521 MVQNGCSEEAILFLRKMQESGL 542
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + + +M+ +G+ P+ +T N LI G++ A T+ GY+PD T+ +L
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 65 INGFCQMGQIRPALQLLRRAE 85
+NG C+ G+ AL LL E
Sbjct: 342 MNGMCRKGESLGALSLLEEME 362
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S+ + L + M G+ PN VT N LI +C ++ A VF ++ P+ T+ TL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
ING+ Q G A + ED ++ D++ Y+
Sbjct: 350 INGYSQQGDHEMAFRFY---EDMVCNGIQRDILTYN 382
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L M+ G V+ N LI +C G ++ A + + K G QP+V TF TLI+G
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC+ +++ A ++ + V + P+ V Y+
Sbjct: 318 FCRAMKLQEASKVFGEM---KAVNVAPNTVTYN 347
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S+ + L + M G+ PN VT N LI +C ++ A VF ++ P+ T+ TL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
ING+ Q G A + ED ++ D++ Y+
Sbjct: 350 INGYSQQGDHEMAFRFY---EDMVCNGIQRDILTYN 382
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
I L M+ G V+ N LI +C G ++ A + + K G QP+V TF TLI+G
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
FC+ +++ A ++ + V + P+ V Y+
Sbjct: 318 FCRAMKLQEASKVFGEM---KAVNVAPNTVTYN 347
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
S +M KGI N VT N LID G+++ A + I ++G +PDVFT+ +LI+G+
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
G ++ + L E+ + +KP + Y
Sbjct: 611 FAGNVQRCIALY---EEMKRSGIKPTLKTY 637
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 12 HQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++M+LKG+ P+ T NILI Y + + F + + G P+V ++ TLIN C+
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A Q+++R +D V P V IY+
Sbjct: 508 SKLLEA-QIVKRDMEDRGVS--PKVRIYN 533
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M + ++P+ +T N LID YC G +F V ++ +P + TF TL+ G
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ G + A +L+ +D V PD +S
Sbjct: 296 KAGMVEDAENVLKEMKDLGFV---PDAFTFS 323
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG++PN V N +ID YC G + A + K+G +PD + LI FC++G++
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A + + + +L + P V Y+
Sbjct: 443 AEKEVNKM---KLKGVSPSVETYN 463
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
+ M+ +G+ P N+LID C G+I AF + K+G + ++ T+ TLI+G
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 70 QMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G++ A LL LKPDV Y+
Sbjct: 576 MTGKLSEAEDLLLEISRK---GLKPDVFTYN 603
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 27 NILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQLLRRAED 86
NILI C G + A + ++ +P+V TF+ LI GFC G+ A +LL R E
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 87 DELVQLKPDVVIYS 100
+ +++PD + ++
Sbjct: 266 E---RIEPDTITFN 276
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M GI P+ + I+I+ Y G+I+ A + + K +P FT+ LI+GF +MG
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ Q L + +D L P+VV+Y+
Sbjct: 667 MMEKGCQYLDKMLED---GLSPNVVLYT 691
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
K I+PN N +I YC G+++ A++ +++K G P++ T+ L+ + G I
Sbjct: 788 KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIES 847
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A+ L E +PD V+YS
Sbjct: 848 AIDLF------EGTNCEPDQVMYS 865
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + +S M+ +G+ N T +++I+ + L AF+VF + K G +PDV + +
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560
Query: 65 INGFCQMGQIRPALQLLRRAE 85
I+ FC MG + A+Q ++ +
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQ 581
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
+ ++++ +M + I N NILID + G + A + ++K G +PD+ T+ + I
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ + G + A Q + E+ E + +KP++ Y+
Sbjct: 772 SACSKAGDMNRATQTI---EEMEALGVKPNIKTYT 803
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G P VT LI+ Y +G+I+ A V +++ G + ++ T++ +INGF ++ A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ ED +KPDV++Y+
Sbjct: 539 FAVF---EDMVKEGMKPDVILYN 558
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G N ++LID C +G++ A V++ + G +PD ++++I G C +G
Sbjct: 457 EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIG 516
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ AL+L E + +PDVV Y+
Sbjct: 517 SMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+SL +M KG PN V ++L+D C G+ N A + + G P+ +T+++L+ G
Sbjct: 382 MSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKG 441
Query: 68 FCQMGQIRPALQLLRRAE 85
F + G A+Q+ + +
Sbjct: 442 FFKTGLCEEAVQVWKEMD 459
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 8 ISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLING 67
+ L +MQ +G P+ V N+LID C G + + + +G P+ T+ TLI+G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 68 FCQMGQIRPALQLLRRAEDDELVQLKPDVVIY 99
C G++ A+ LL R + + P+ V Y
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCI---PNDVTY 330
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 1 MKHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFT 60
++ Y V++ + M I PN ++ N++I C L ++ A VF + +R PD +T
Sbjct: 168 LEFYDYVVNSNMNMN---ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYT 224
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ TL++G C+ +I A+ LL + + P VIY+
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSE---GCSPSPVIYN 261
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+ + L +M+ +GI P VT NILI Y LG+ + A + + G DVFT+
Sbjct: 263 HEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTA 322
Query: 64 LINGFCQMGQIRPALQLLRR 83
+I+G G AL + R+
Sbjct: 323 MISGLIHNGMRYQALDMFRK 342
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 12 HQMQLK-GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQ 70
H + +K G + + + N L+D Y G++ A VF +++ + DV+T+ ++I G+CQ
Sbjct: 375 HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQ 430
Query: 71 MGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G A +L R +D L+P+++ ++
Sbjct: 431 AGYCGKAYELFTRMQD---ANLRPNIITWN 457
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++PN VT ++ Y G + A V + RG+ PD T+ L++G+C++G+ A
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 78 LQLLRRAEDDELVQLKPDVVIY 99
++ E +E ++P+ V Y
Sbjct: 281 ATVMDDMEKNE---IEPNEVTY 299
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
GI PN T N+L+ C I A+ V I G P++ T+ T++ G+ G + A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
++L D PD Y+
Sbjct: 246 KRVLEEMLDRGWY---PDATTYT 265
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G P+ V ++I Y G+++ A +F + +G P+VFT+ ++I G C G
Sbjct: 349 EMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAG 408
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ R A LL+ E P+ V+YS
Sbjct: 409 EFREACWLLKEMESR---GCNPNFVVYS 433
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V L +M+ GI P+ T NILI G I+ A + + + +RG+ P F +I
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GF + G + A L D +++KPDVV S
Sbjct: 557 GFSKRGDFQEAFILWFYMAD---LRMKPDVVTCS 587
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++P+ V +ID YC+LG+ + AF F + K G P + T LI + G I A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ R + + LK DVV Y+
Sbjct: 463 ESVFRNMKTE---GLKLDVVTYN 482
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P+ VT + L+ YC ++ A +F + G +PDV + TLI+G+C +G I A +L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 81 L 81
+
Sbjct: 641 I 641
Score = 45.8 bits (107), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ GI P+ V + ID C G + A SV ++ G D + +++I+GFC++G+
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
A++L+ +L+P++ +YS
Sbjct: 357 PEEAIKLIHS------FRLRPNIFVYS 377
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V L +M+ GI P+ T NILI G I+ A + + + +RG+ P F +I
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 67 GFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
GF + G + A L D +++KPDVV S
Sbjct: 557 GFSKRGDFQEAFILWFYMAD---LRMKPDVVTCS 587
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++P+ V +ID YC+LG+ + AF F + K G P + T LI + G I A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 78 LQLLRRAEDDELVQLKPDVVIYS 100
+ R + + LK DVV Y+
Sbjct: 463 ESVFRNMKTE---GLKLDVVTYN 482
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 21 PNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPALQL 80
P+ VT + L+ YC ++ A +F + G +PDV + TLI+G+C +G I A +L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 81 L 81
+
Sbjct: 641 I 641
Score = 45.8 bits (107), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ GI P+ V + ID C G + A SV ++ G D + +++I+GFC++G+
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 74 IRPALQLLRRAEDDELVQLKPDVVIYS 100
A++L+ +L+P++ +YS
Sbjct: 357 PEEAIKLIHS------FRLRPNIFVYS 377
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + + L +M G PN VT N LI Y +N A +VF +++ G +PD T+
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI+ + G + A+ + +R + L PD YS
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAG---GLSPDTFTYS 473
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + + L +M G PN VT N LI Y +N A +VF +++ G +PD T+
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI+ + G + A+ + +R + L PD YS
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAG---GLSPDTFTYS 473
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + + L +M G PN VT N LI Y +N A +VF +++ G +PD T+
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI+ + G + A+ + +R + L PD YS
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAG---GLSPDTFTYS 473
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L ++M KG+ P T N +ID +C G+I+ S + + PDV T+ +LI+G C
Sbjct: 636 LFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC 695
Query: 70 QMGQIRPALQLLRRAE 85
G RP+ + R E
Sbjct: 696 ASG--RPSEAIFRWNE 709
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G+ P+ VT N L+D Y G+ A + T+ K +PD+ ++ T+I GFC+ G ++ A
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEA 720
Query: 78 LQLL 81
+++L
Sbjct: 721 VRML 724
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+MQ+ GI+PN VT N +I YC L ++ A + + +G PD ++ T++ C+
Sbjct: 302 RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+I L+++ + L PD V Y+
Sbjct: 362 RIVEVRDLMKKMAKEH--GLVPDQVTYN 387
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 10 LSHQMQLKG-IMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
L ++M KG P+ VT +++ +C LG+++ A + + G++P+ ++ L+NG
Sbjct: 440 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
C+ G+ A +++ +E+ P+ + YS
Sbjct: 500 CRTGKSLEAREMMNMSEEH---WWSPNSITYS 528
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + +M LKG P V N+L+ C G+ + A +G +V F T+
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+GFCQ ++ AL +L +D L+ DV Y+
Sbjct: 601 IHGFCQNDELDAALSVL---DDMYLINKHADVFTYT 633
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
TV+S ++Q +G+ P+ V N++I Y LG+ A VF ++ KR PD +TFA+++
Sbjct: 303 TVLS---KVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASIL 359
Query: 66 NGFCQMGQ 73
+ C G+
Sbjct: 360 SSLCLSGK 367
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L H ++ G+MPN +T N LI +C ++ A + + + ++ PD+ T+ TLI G C
Sbjct: 318 LEHMLE-NGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQC 375
Query: 70 QMGQIRPALQLLRRAEDDELV 90
G + A +LL E+ LV
Sbjct: 376 SSGNLDSAYRLLSLMEESGLV 396
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S ++L QM GI P+ +LI +C ++ A + + + G P+V T+ L
Sbjct: 277 SEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNAL 336
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I GFC+ + A+ LL + + LV PD++ Y+
Sbjct: 337 IKGFCK-KNVHKAMGLLSKMLEQNLV---PDLITYN 368
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K +SL +M+ PN T +LID C GQ + A ++F + + G +PD +
Sbjct: 239 KKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMY 298
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LI FC + A LL ++ L+ P+V+ Y+
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLM---PNVITYN 334
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K V+ +M+ + P+ VT +I Y LG++ A++ F + +RG PD T+
Sbjct: 903 KQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTY 962
Query: 62 ATLINGFCQMGQIRPALQLLRRAED 86
+ IN CQ + AL+LL D
Sbjct: 963 SKFINCLCQACKSEDALKLLSEMLD 987
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
S M+ KGI PN V N ++ +C + ++ A S+F+ + ++G +P+ FT++ LI+GF
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
K + + L +M G PN VT N LI Y + A +VF +++ G +PD T+
Sbjct: 373 KQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTY 432
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
TLI+ + G + A+ + +R ++ L PD YS
Sbjct: 433 CTLIDIHAKAGFLDIAMDMYQRMQE---AGLSPDTFTYS 468
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 1 MKHYSTVISLS-----HQMQLK-GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGY 54
+K + V SLS H M +K + + +N LI CY G ++ A VF TI+++
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK-- 195
Query: 55 QPDVFTFATLINGFCQMGQIRPALQLLRRAEDDEL 89
DV ++ ++INGF Q G AL+L ++ E +++
Sbjct: 196 --DVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
T +S+ ++ GI+P+ V+ L++ Y Q A VF +RK +P+V T+ LI
Sbjct: 373 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVV 97
+ + G + A+++ R+ E D +KP+VV
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQD---GIKPNVV 461
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQ--PDVF 59
+ YS +S M+ + P+ T NI+I C LGQ + A +F ++R++ + PDV
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 60 TFATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
TF ++++ + G+I RA + +V LKP++V Y+
Sbjct: 322 TFTSIMHLYSVKGEIENC-----RAVFEAMVAEGLKPNIVSYN 359
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 6 TVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLI 65
T +S+ ++ GI+P+ V+ L++ Y Q A VF +RK +P+V T+ LI
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 66 NGFCQMGQIRPALQLLRRAEDDELVQLKPDVV 97
+ + G + A+++ R+ E D +KP+VV
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQD---GIKPNVV 329
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQ--PDVF 59
+ YS +S M+ + P+ T NI+I C LGQ + A +F ++R++ + PDV
Sbjct: 130 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 60 TFATLINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
TF ++++ + G+I RA + +V LKP++V Y+
Sbjct: 190 TFTSIMHLYSVKGEIENC-----RAVFEAMVAEGLKPNIVSYN 227
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 43/79 (54%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V SL+ QM+ G++P+ N++I Y +++ A VF + G +P+ +T++ L+
Sbjct: 207 VRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 67 GFCQMGQIRPALQLLRRAE 85
G C+ G++ L + +
Sbjct: 267 GVCEKGRVGQGLGFYKEMQ 285
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATI-RKRGYQPDVFT 60
K + +V + QM+ G+ P T +ID YC +G+++ A +F + P+
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LIN F ++G AL L E+ ++ ++P+V Y+
Sbjct: 655 YNILINAFSKLGNFGQALSL---KEEMKMKMVRPNVETYN 691
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G + N T N++I +C ++ A SVF + K G P+V +F +I+G C+ G
Sbjct: 208 EMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTG 267
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+R ALQLL + + P+ V Y+
Sbjct: 268 DMRFALQLLGKMGMMSGNFVSPNAVTYN 295
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATI-RKRGYQPDVFT 60
K + +V + QM+ G+ P T +ID YC +G+++ A +F + P+
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LIN F ++G AL L E+ ++ ++P+V Y+
Sbjct: 655 YNILINAFSKLGNFGQALSL---KEEMKMKMVRPNVETYN 691
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATI-RKRGYQPDVFT 60
K + +V + QM+ G+ P T +ID YC +G+++ A +F + P+
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 61 FATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ LIN F ++G AL L E+ ++ ++P+V Y+
Sbjct: 655 YNILINAFSKLGNFGQALSL---KEEMKMKMVRPNVETYN 691
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG+ P+ T NIL+ + F + K G PDV+ F T IN FC+ G++
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEE 278
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A++L + E+ + P+VV ++
Sbjct: 279 AVKLFSKMEE---AGVAPNVVTFN 299
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L M+ KGI PN T LI + ++ A +F +R G +P+VF + L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+G+ ++GQ+ LLR + P+ + Y+
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSK---NVHPNKITYT 754
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M K + PN V N LI YC G+++ A + ++ +G P+ T+ +LI G +
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A L E+ + L+P+V Y+
Sbjct: 695 RVEEAKLLF---EEMRMEGLEPNVFHYT 719
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+S + L Q KG + + TSN L+ C G+++ AF + I RG D ++ T
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
LI+G C ++ A L DE+V+ LKPD YS
Sbjct: 546 LISGCCGKKKLDEAFMFL-----DEMVKRGLKPDNYTYS 579
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M KG PN + N LID + G +N A + + +G T+ TLI G+C+ G
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 73 QIRPALQLLR 82
Q A +LL+
Sbjct: 415 QADNAERLLK 424
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 17 KGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRP 76
KG+ P+ T NIL+ + F + K G PDV+ F T IN FC+ G++
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEE 278
Query: 77 ALQLLRRAEDDELVQLKPDVVIYS 100
A++L + E+ + P+VV ++
Sbjct: 279 AVKLFSKMEE---AGVAPNVVTFN 299
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S + L M+ KGI PN T LI + ++ A +F +R G +P+VF + L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I+G+ ++GQ+ LLR + P+ + Y+
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSK---NVHPNKITYT 754
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M K + PN V N LI YC G+++ A + ++ +G P+ T+ +LI G +
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
++ A L E+ + L+P+V Y+
Sbjct: 695 RVEEAKLLF---EEMRMEGLEPNVFHYT 719
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
+S + L Q KG + + TSN L+ C G+++ AF + I RG D ++ T
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 64 LINGFCQMGQIRPALQLLRRAEDDELVQ--LKPDVVIYS 100
LI+G C ++ A L DE+V+ LKPD YS
Sbjct: 546 LISGCCGKKKLDEAFMFL-----DEMVKRGLKPDNYTYS 579
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M KG PN + N LID + G +N A + + +G T+ TLI G+C+ G
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 73 QIRPALQLLR 82
Q A +LL+
Sbjct: 415 QADNAERLLK 424
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 4 YSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFAT 63
Y+ I +M G+MP+ VT + ++D Y G++ S++ G++PD F+
Sbjct: 237 YNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSV 296
Query: 64 LINGFCQMGQ---IRPALQLLRRAEDDELVQLKPDVVIYS 100
L F + G IR LQ ++ + +KP+VV+Y+
Sbjct: 297 LGKMFGEAGDYDGIRYVLQEMKSMD------VKPNVVVYN 330
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 5 STVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATL 64
S V + ++M G ++ N +I +C G+ + AF +F + + G P+ T+ L
Sbjct: 370 SLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNAL 429
Query: 65 INGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
I GFC+ ++ L+L + + + LKP + Y+
Sbjct: 430 IKGFCKENKVEKGLKLYKEL---KALGLKPSGMAYA 462
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M + + + + N L+D C G ++ + +F + G +PD ++FA I+ +C G
Sbjct: 233 EMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAG 292
Query: 73 QIRPALQLLRRAEDDELVQLKPDVVIYS 100
+ A ++L R + +LV P+V ++
Sbjct: 293 DVHSAYKVLDRMKRYDLV---PNVYTFN 317
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L M+ +G +P+ VT LI YC + ++ A VF +R G +P+ T + LI GF
Sbjct: 184 LVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFL 243
Query: 70 QMGQIRPALQLLR 82
+M + +L++
Sbjct: 244 KMRDVETGRKLMK 256
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
GI P+ VT N +I C G ++ S+F + K G++PD+ +F TL+ F
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEF 238
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 15 QLKGI---MPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++KGI PN VT NIL+ + G+++ ++F + PDV+TF +++ + +
Sbjct: 197 KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKN 256
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G I+ +L R +E KPD++ ++
Sbjct: 257 GMIKEMEAVLTRMRSNE---CKPDIITFN 282
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 15 QLKGI---MPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQM 71
++KGI PN VT NIL+ + G+++ ++F + PDV+TF +++ + +
Sbjct: 197 KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKN 256
Query: 72 GQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G I+ +L R +E KPD++ ++
Sbjct: 257 GMIKEMEAVLTRMRSNE---CKPDIITFN 282
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+H L + L G++P T NIL+D C G + A +F ++ R +P++ T+
Sbjct: 133 RHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTY 191
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
LING C+ ++ ++R + P+ V Y+
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYT---PNAVTYT 227
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 18 GIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQIRPA 77
G++P+ +T N LI Y I+ A++V +R+ G +PDV T+ +LI+G + +
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 78 LQLLRRAEDDELVQ--LKPDVVIYS 100
LQL DE++ L PD+ Y+
Sbjct: 103 LQLF-----DEMLHSGLSPDMWSYN 122
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 7 VISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLIN 66
V L ++++KG+ P+ T I+++ ++G A A I + G QP V T LI+
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLID 372
Query: 67 GFCQMGQIRPALQLLRRAE 85
G C+ G + A++L E
Sbjct: 373 GLCKAGHVDRAMRLFASME 391
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
S+ +M+ +G+ P+ T ++LID Y + G+ A V + QP+ F F+ L+ GF
Sbjct: 360 SMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF 419
Query: 69 CQMGQIRPALQLLRRAEDDELVQLKPDVVIYS 100
G+ + Q+L+ + + +KPD Y+
Sbjct: 420 RDRGEWQKTFQVLKEMKS---IGVKPDRQFYN 448
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 14 MQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMGQ 73
M+ K + + N + +C+ G++ A V I + G PD ++ L+ G C+ G+
Sbjct: 168 MRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGK 227
Query: 74 IRPALQLLRRAEDDELVQL 92
+ A+ +LRR E+D + L
Sbjct: 228 VEAAMAILRRMEEDGVTVL 246
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 2 KHYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTF 61
+ + + + M KG+ PN V N LI+ G++ F V++ ++ G++PD +T+
Sbjct: 298 EKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTW 357
Query: 62 ATLINGFCQMGQIRPALQLLRRAEDDELVQL 92
L+ + + LQL + L L
Sbjct: 358 NALLTALYKANRYEDVLQLFDMIRSENLCCL 388
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 9 SLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGF 68
+L +M K + P+ +T +LI + G++ AF ++KRG +P+V T L+ G
Sbjct: 571 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630
Query: 69 CQMGQIRPALQLLRRAEDD 87
C+ G I A + L + E++
Sbjct: 631 CKAGNIDEAYRYLCKMEEE 649
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 3 HYSTVISLSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFA 62
H S SL +M+ KGI P+ T NIL+ + G I A + IRK G PD T
Sbjct: 355 HLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHR 414
Query: 63 TLINGFCQ 70
+++ CQ
Sbjct: 415 AVLHILCQ 422
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 13 QMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFCQMG 72
+M G P T +I Y LG ++ A ++ + K G +P+ + +LINGF + G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 73 QIRPALQLLRRAED 86
+ A+Q R E+
Sbjct: 635 MVEEAIQYFRMMEE 648
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 10 LSHQMQLKGIMPNFVTSNILIDCYCHLGQINFAFSVFATIRKRGYQPDVFTFATLINGFC 69
L +M G+ P+ +T +I+ YC+ G+I+ A+ + + K + T++ ++ G C
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 70 QMGQIRPALQLLRRAE-DDELVQLKPDVVIYS 100
+ G + AL+LL E +D + P+ V Y+
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYT 278